Query psy16425
Match_columns 163
No_of_seqs 132 out of 1806
Neff 10.9
Searched_HMMs 29240
Date Fri Aug 16 20:57:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16425.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16425hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rbs_A Myomesin-1; immunoglobu 99.9 3.4E-20 1.1E-24 124.3 16.5 141 4-157 19-185 (207)
2 2yd1_A Tyrosine-protein phosph 99.9 5.9E-20 2E-24 123.0 17.4 144 3-156 22-176 (212)
3 3kld_A Contactin 4, axcam, BIG 99.8 9.5E-21 3.2E-25 137.5 12.1 140 3-157 221-361 (384)
4 1epf_A NCAM, protein (neural c 99.8 4.1E-20 1.4E-24 121.6 13.9 145 3-156 18-168 (191)
5 2j8h_A Titin, connectin; cardi 99.8 5.7E-20 1.9E-24 121.5 13.2 146 3-156 20-174 (197)
6 3lcy_A Titin; A-BAND, IG tande 99.8 3E-19 1E-23 117.8 16.6 144 3-156 23-173 (197)
7 2v44_A NCAM2, neural cell adhe 99.8 2.4E-19 8.1E-24 117.8 15.2 142 3-156 18-164 (189)
8 2yd6_A PTPRD protein; hydrolas 99.8 1.1E-18 3.8E-23 116.8 17.7 142 3-156 22-180 (212)
9 4fa8_A Secreted protein BARF1; 99.8 3E-20 1E-24 124.2 9.9 152 2-156 8-179 (203)
10 2r15_A Myomesin-1; sarcomeric 99.8 4.8E-19 1.6E-23 118.2 14.7 140 6-157 21-188 (212)
11 2iep_A Muscle-specific kinase 99.8 2E-19 6.9E-24 118.3 12.6 141 3-156 23-166 (192)
12 2rik_A Titin; I-SET IG fold, p 99.8 1.9E-18 6.5E-23 120.2 18.2 141 4-156 116-261 (284)
13 2v5t_A NCAM2, N-CAM 2, neural 99.8 1.1E-19 3.8E-24 119.2 11.2 143 3-156 18-165 (189)
14 2rik_A Titin; I-SET IG fold, p 99.8 1.3E-18 4.5E-23 120.9 16.9 143 3-156 21-168 (284)
15 2wv3_A Neuroplastin; igcam, me 99.8 1.5E-18 5.1E-23 114.2 16.1 137 3-156 19-167 (190)
16 2a38_A Titin; Z1Z2, structural 99.8 8.6E-19 2.9E-23 115.5 14.3 144 3-156 21-172 (194)
17 3b43_A Titin; I-SET IG fold, e 99.8 1.5E-18 5.1E-23 131.8 16.8 142 3-156 307-453 (570)
18 2jll_A NCAM2, neural cell adhe 99.8 1.8E-18 6.3E-23 125.1 14.7 148 3-156 16-171 (389)
19 2va4_A NCAM2, N-CAM 2, neural 99.8 3.9E-18 1.3E-22 112.0 15.0 139 3-156 20-170 (192)
20 2c5d_C AXL oncogene, tyrosine- 99.8 2.7E-18 9.2E-23 113.4 13.9 139 3-151 18-166 (195)
21 3qs9_E FL cytokine receptor; i 99.8 2.7E-19 9.4E-24 134.9 10.0 146 3-157 243-392 (527)
22 1qz1_A Neural cell adhesion mo 99.8 1E-18 3.5E-23 121.8 12.3 145 3-156 18-168 (291)
23 1rhf_A Tyrosine-protein kinase 99.8 2.3E-18 7.8E-23 112.5 13.0 134 3-150 18-155 (182)
24 3p3y_A Neurofascin; IG domains 99.8 1.1E-18 3.8E-23 126.7 12.6 139 3-156 238-380 (404)
25 2fbo_J V1V2;, variable region- 99.8 4.7E-19 1.6E-23 121.1 9.9 152 3-156 18-226 (250)
26 3r4d_A CEA-related cell adhesi 99.8 2.2E-18 7.5E-23 114.7 12.7 148 3-156 15-176 (208)
27 3b43_A Titin; I-SET IG fold, e 99.8 2.7E-18 9.3E-23 130.4 14.5 143 3-156 213-360 (570)
28 1f97_A Junction adhesion molec 99.8 1.7E-18 5.8E-23 115.4 11.9 147 3-156 17-182 (212)
29 3jz7_A MCAR, CAR, coxsackievir 99.8 6E-19 2.1E-23 117.6 9.6 152 3-156 16-189 (214)
30 3laf_A Deleted in colorectal c 99.8 1.2E-18 4.1E-23 126.5 11.8 140 3-156 237-378 (403)
31 1hng_A CD2; T lymphocyte adhes 99.8 5.5E-18 1.9E-22 110.7 13.6 135 3-156 12-153 (176)
32 3nl4_L Antigen binding fragmen 99.8 1.6E-18 5.4E-23 116.0 11.2 151 3-156 17-191 (213)
33 1cs6_A Axonin-1; neural cell a 99.8 2.3E-18 7.7E-23 124.5 12.3 136 3-156 223-359 (382)
34 2yd9_A Receptor-type tyrosine- 99.8 5.9E-18 2E-22 119.0 14.1 142 3-156 22-177 (304)
35 1qz1_A Neural cell adhesion mo 99.8 1.1E-18 3.7E-23 121.7 10.2 143 3-156 116-267 (291)
36 2v5m_A Dscam; neurobiology SPL 99.8 3.5E-18 1.2E-22 123.6 13.1 138 3-156 228-366 (388)
37 1bih_A Hemolin; insect immunit 99.8 2.1E-18 7.3E-23 124.9 11.6 145 3-157 228-374 (395)
38 2wim_A N-CAM 2, NCAM2, neural 99.8 1.8E-18 6.3E-23 120.5 10.7 143 3-156 114-261 (291)
39 3mj8_L Stimulatory hamster ant 99.8 2.9E-18 9.9E-23 114.7 11.1 151 3-156 16-190 (213)
40 2nzi_A Titin; IG-domain, FNIII 99.8 5.1E-18 1.8E-22 119.1 12.4 146 3-156 20-174 (305)
41 3qs7_E FL cytokine receptor; i 99.8 3.2E-18 1.1E-22 125.9 11.7 124 3-135 243-370 (423)
42 3bp6_B Programmed cell death 1 99.8 2E-18 6.8E-23 114.7 9.6 143 3-156 18-170 (202)
43 3grw_A Fibroblast growth facto 99.8 3.4E-18 1.2E-22 116.2 10.8 145 3-156 31-195 (241)
44 1nbq_A JAM, junctional adhesio 99.8 1.2E-18 4.3E-23 115.8 8.5 147 3-156 20-184 (209)
45 3sgj_C Human FCG3A receptor; r 99.8 3.8E-17 1.3E-21 109.1 14.8 126 3-156 23-150 (204)
46 3ojm_B Fibroblast growth facto 99.8 5.9E-18 2E-22 114.1 11.0 145 3-156 35-198 (231)
47 3k0w_A Mucosa-associated lymph 99.8 1.1E-17 3.8E-22 112.5 12.2 128 3-156 34-178 (218)
48 2d3v_A Leukocyte immunoglobuli 99.8 5.6E-18 1.9E-22 112.2 10.6 138 3-156 20-169 (196)
49 2ny1_B T-cell surface glycopro 99.8 1.3E-17 4.6E-22 109.2 12.1 139 3-156 11-156 (184)
50 1vca_A VCAM-D1,2, human vascul 99.8 3.7E-17 1.3E-21 109.0 13.9 139 3-156 17-167 (202)
51 2y23_A Myomesin; structural pr 99.8 1.2E-17 4.1E-22 117.4 12.0 140 5-156 21-179 (312)
52 4fqp_A Poliovirus receptor; im 99.8 1.4E-17 4.9E-22 117.5 12.5 142 5-156 135-281 (313)
53 4dep_C Interleukin-1 receptor 99.8 3E-17 1E-21 117.3 14.2 150 3-157 23-191 (349)
54 3oq3_B IFN-alpha/beta binding 99.8 7.4E-17 2.5E-21 114.7 15.8 138 3-156 144-306 (329)
55 3sbw_C Programmed cell death 1 99.8 6.8E-17 2.3E-21 108.5 14.8 126 3-131 17-156 (222)
56 3s97_C Contactin-1; carbonic a 99.7 2.9E-18 9.8E-23 113.4 7.5 142 3-156 24-178 (201)
57 1fnl_A Low affinity immunoglob 99.7 5.3E-17 1.8E-21 105.7 13.4 126 3-156 23-150 (175)
58 2gi7_A GPVI protein; IG-like d 99.7 7.5E-18 2.6E-22 110.6 9.1 129 3-156 23-157 (184)
59 2y25_A Myomesin; structural pr 99.7 3.4E-17 1.2E-21 115.3 13.0 131 14-156 135-292 (317)
60 2wim_A N-CAM 2, NCAM2, neural 99.7 3.2E-17 1.1E-21 114.2 12.5 142 3-156 20-166 (291)
61 3d9a_L Light chain of hyhel10 99.7 2.3E-17 7.8E-22 110.3 11.2 151 3-156 17-190 (213)
62 2y23_A Myomesin; structural pr 99.7 2E-16 7E-21 111.1 16.5 140 4-156 124-289 (312)
63 1uct_A Immunoglobulin alpha FC 99.7 5.4E-18 1.8E-22 114.4 8.1 139 3-156 24-170 (218)
64 3ejj_X Macrophage colony-stimu 99.7 4.7E-17 1.6E-21 113.3 13.1 140 3-156 105-258 (289)
65 2v9r_A Roundabout homolog 1; p 99.7 1.8E-17 6.1E-22 110.5 10.4 148 3-156 25-178 (212)
66 1itb_B Type 1 interleukin-1 re 99.7 1.1E-16 3.7E-21 112.9 14.8 141 3-157 119-292 (315)
67 3s96_B 3B5H10 FAB light chain; 99.7 5.6E-17 1.9E-21 108.7 12.4 129 3-134 16-166 (218)
68 1oll_A NK receptor; immune sys 99.7 4.6E-17 1.6E-21 107.2 11.6 138 3-156 19-162 (188)
69 3p2t_A Leukocyte immunoglobuli 99.7 2.2E-17 7.6E-22 109.3 9.8 138 3-156 20-168 (196)
70 2p1y_A Bispecific alpha/beta T 99.7 3.6E-16 1.2E-20 106.2 16.0 151 3-156 16-212 (238)
71 2vr9_A Roundabout 1, ROBO; imm 99.7 1.9E-17 6.6E-22 110.9 9.4 146 3-156 25-183 (217)
72 3tv3_L PGT128 light chain, IG 99.7 5.7E-17 2E-21 108.3 11.4 149 3-156 16-188 (211)
73 1lk3_L 9D7 light chain; antige 99.7 4.5E-17 1.5E-21 108.8 10.8 151 3-156 16-189 (210)
74 2ec8_A MAST/stem cell growth f 99.7 2.9E-16 1E-20 117.9 16.3 148 3-156 227-388 (524)
75 1nqb_A Single-chain antibody f 99.7 1.4E-16 4.6E-21 109.9 13.1 152 3-156 16-209 (256)
76 2o26_X MAST/stem cell growth f 99.7 1.1E-16 3.8E-21 111.7 12.7 139 3-156 107-265 (290)
77 2if7_A SLAM family member 6; N 99.7 1.3E-16 4.5E-21 105.5 12.4 137 3-152 14-164 (193)
78 2ghw_B Anti-SARS SCFV antibody 99.7 4.1E-16 1.4E-20 106.5 15.2 152 3-156 18-218 (247)
79 1f2q_A High affinity immunoglo 99.7 5.6E-17 1.9E-21 105.6 10.3 126 3-156 20-147 (176)
80 4frw_A Poliovirus receptor-rel 99.7 2.2E-16 7.5E-21 105.1 13.4 154 2-156 14-188 (218)
81 2x1w_L Vascular endothelial gr 99.7 4E-17 1.4E-21 109.4 9.7 140 3-156 25-184 (213)
82 2ocw_A Polymeric-immunoglobuli 99.7 2.9E-16 9.8E-21 119.3 15.3 153 3-157 347-523 (585)
83 2pet_A Lutheran blood group gl 99.7 2E-16 6.7E-21 106.8 12.9 130 3-136 16-165 (231)
84 3ry4_A Low affinity immunoglob 99.7 2.4E-16 8.2E-21 101.8 12.7 126 3-156 20-147 (170)
85 3pv7_A B7-H6, IG-like domain-c 99.7 3.6E-17 1.2E-21 111.9 9.3 126 2-130 18-159 (248)
86 3esu_F Antibody 14B7* light ch 99.7 1.8E-16 6.1E-21 108.5 12.7 151 3-156 20-223 (250)
87 2wng_A Tyrosine-protein phosph 99.7 1.9E-16 6.4E-21 112.4 13.2 128 3-134 19-162 (327)
88 1ugn_A LIR1, leukocyte immunog 99.7 1.5E-17 5.2E-22 110.2 7.1 138 3-156 20-170 (198)
89 4dep_C Interleukin-1 receptor 99.7 7.4E-17 2.5E-21 115.3 11.1 139 4-156 137-310 (349)
90 4ei6_B Vbeta16 XV19 type II na 99.7 2.2E-16 7.5E-21 107.8 12.9 130 3-134 18-169 (245)
91 3r06_A Anti-mouse CD3epsilon a 99.7 6.4E-17 2.2E-21 108.1 10.0 128 3-133 17-156 (213)
92 3dmk_A DOWN syndrome cell adhe 99.7 7.6E-17 2.6E-21 126.7 11.8 144 3-157 635-787 (816)
93 2yd9_A Receptor-type tyrosine- 99.7 9.6E-17 3.3E-21 112.7 11.0 136 3-150 124-264 (304)
94 3laf_A Deleted in colorectal c 99.7 1.9E-16 6.5E-21 114.9 12.7 144 3-156 137-288 (403)
95 3u83_A Poliovirus receptor-rel 99.7 2E-16 6.8E-21 112.2 12.3 142 4-156 152-297 (331)
96 1f3r_B FV antibody fragment; I 99.7 7.9E-16 2.7E-20 105.9 14.9 154 3-156 16-222 (257)
97 3nfj_J T cell receptor beta ch 99.7 3E-16 1E-20 107.2 12.7 131 3-134 17-169 (245)
98 1nkr_A P58-CL42 KIR; inhibitor 99.7 1.8E-16 6.3E-21 105.3 11.3 138 3-156 23-174 (201)
99 4f80_A Butyrophilin subfamily 99.7 1.7E-16 5.8E-21 107.1 11.2 128 2-132 19-160 (226)
100 3sob_L Antibody light chain; b 99.7 8.4E-17 2.9E-21 109.1 9.5 151 3-156 40-213 (237)
101 3umt_A SCFV heavy chain and li 99.7 9.2E-16 3.1E-20 105.5 14.7 152 3-156 18-221 (256)
102 1q9r_B S25-2 FAB (IGG1K) heavy 99.7 3.1E-16 1.1E-20 105.6 12.0 150 3-154 16-199 (222)
103 3b5h_A Cervical EMMPRIN, HAB18 99.7 9.2E-16 3.2E-20 100.2 13.8 133 3-156 14-160 (184)
104 2zg1_A Sialic acid-binding IG- 99.7 1.2E-16 4.1E-21 106.8 9.5 150 3-156 16-190 (214)
105 4dzb_B Vbeta2 (MAIT T cell rec 99.7 2.2E-16 7.4E-21 107.9 11.0 131 3-134 17-170 (246)
106 1q0x_L FAB 9B1, light chain; a 99.7 5.2E-16 1.8E-20 103.7 12.6 151 3-156 16-192 (212)
107 4fom_A Poliovirus receptor-rel 99.7 1.1E-16 3.8E-21 112.5 9.7 154 3-156 15-185 (308)
108 1ry7_B FGFR-3, fibroblast grow 99.7 3.1E-17 1.1E-21 116.5 6.8 143 4-156 140-304 (334)
109 4i0k_A CD276 antigen; immunogl 99.7 6.8E-17 2.3E-21 108.6 8.1 151 3-156 11-183 (222)
110 2rcj_C Light chain; immunoglob 99.7 8.1E-16 2.8E-20 115.5 14.5 151 3-156 16-191 (523)
111 3mj6_A Junctional adhesion mol 99.7 4.1E-16 1.4E-20 107.6 11.9 121 3-128 21-158 (268)
112 1jbj_A CD3 epsilon and gamma e 99.7 7.2E-17 2.5E-21 106.2 7.7 127 3-156 15-166 (186)
113 1e07_A Carcinoembryonic antige 99.7 8.4E-16 2.9E-20 118.0 14.4 132 4-156 484-617 (642)
114 1qok_A MFE-23 recombinant anti 99.7 3.3E-15 1.1E-19 104.2 16.2 151 3-156 42-244 (282)
115 1pz5_B Heavy chain of FAB (SYA 99.7 9.3E-16 3.2E-20 103.1 13.0 150 3-154 16-197 (220)
116 1sy6_A T-cell surface glycopro 99.7 7.8E-16 2.7E-20 102.7 12.4 127 3-156 19-180 (204)
117 3o4o_C Interleukin-1 receptor 99.7 6.1E-17 2.1E-21 115.3 7.2 144 3-156 34-193 (339)
118 1nfd_E H57 FAB; complex (immun 99.7 1.2E-16 4.1E-21 106.8 8.2 151 3-156 15-189 (212)
119 1moe_A Anti-CEA MAB T84.66; an 99.7 7.3E-16 2.5E-20 104.8 12.2 152 3-156 17-211 (240)
120 2ocw_A Polymeric-immunoglobuli 99.7 2.5E-15 8.6E-20 114.1 16.3 153 3-157 16-199 (585)
121 2ifg_A High affinity nerve gro 99.7 2.9E-17 1E-21 117.7 5.1 136 3-156 174-322 (347)
122 2c1o_A IGK-C protein; FAB frag 99.7 2.8E-16 9.6E-21 107.8 9.8 151 3-156 54-232 (254)
123 1e07_A Carcinoembryonic antige 99.7 1.1E-15 3.8E-20 117.3 14.1 132 4-156 128-261 (642)
124 3bkj_L WO2 IGG2A FAB fragment 99.7 4.2E-16 1.4E-20 106.9 10.5 151 3-156 50-228 (252)
125 3qib_D 2B4 beta chain; IG doma 99.7 1E-15 3.4E-20 106.0 12.3 129 3-133 43-193 (270)
126 3pl6_D MBP peptide / T-cell re 99.7 1E-15 3.4E-20 105.9 12.2 129 3-133 42-190 (268)
127 3rjd_A High affinity immunoglo 99.7 2.4E-15 8.2E-20 103.1 13.9 126 3-156 17-144 (262)
128 3d9a_H Heavy chain of hyhel10 99.7 1.6E-15 5.3E-20 101.3 12.6 150 3-154 16-190 (210)
129 3auv_A SC-DSFV derived from th 99.7 8.3E-16 2.8E-20 106.9 11.7 152 3-156 28-226 (276)
130 1wio_A CD4, T-cell surface gly 99.7 3.8E-16 1.3E-20 112.3 10.2 140 3-157 10-156 (363)
131 2xzc_L FAB A.17 light chain; i 99.7 4.6E-16 1.6E-20 104.3 9.9 151 3-156 16-192 (216)
132 3u83_A Poliovirus receptor-rel 99.7 8.6E-16 2.9E-20 108.9 11.9 154 3-156 30-207 (331)
133 1c1e_H Catalytic antibody 1E9 99.7 9.2E-16 3.1E-20 103.0 11.4 127 3-131 16-166 (219)
134 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.7 1.8E-15 6.3E-20 104.1 13.1 151 3-156 19-223 (256)
135 3q5y_A TCR N15 beta; IG, T cel 99.7 4.5E-15 1.5E-19 101.0 14.6 129 3-133 18-166 (240)
136 3juy_B 3B3 single chain varian 99.7 9.2E-15 3.1E-19 100.5 16.3 152 3-156 22-233 (256)
137 3oq3_B IFN-alpha/beta binding 99.7 2.3E-16 8E-21 112.1 8.5 137 4-157 46-196 (329)
138 1op3_H FAB 2G12, heavy chain; 99.7 6.2E-15 2.1E-19 99.5 15.0 150 3-154 16-201 (225)
139 1svz_A Immunoglobulin;, single 99.7 8.5E-16 2.9E-20 105.0 10.7 152 3-156 17-219 (247)
140 2znx_A SCFV; fluorotryptohpan, 99.7 1.9E-15 6.6E-20 103.1 12.4 151 3-156 17-213 (242)
141 1dee_B IGM RF 2A2; FAB-IBP com 99.7 2.9E-15 9.9E-20 101.1 13.0 128 3-132 16-170 (223)
142 3dmk_A DOWN syndrome cell adhe 99.7 2.3E-15 7.8E-20 118.4 14.2 142 3-156 445-593 (816)
143 3omz_A Human vdelta1 gamma del 99.7 2.4E-15 8.3E-20 103.5 12.8 152 3-156 18-222 (259)
144 1wio_A CD4, T-cell surface gly 99.7 3.4E-16 1.2E-20 112.6 8.8 129 3-156 112-268 (363)
145 2dru_A Chimera of CD48 antigen 99.7 2.6E-15 8.8E-20 98.4 12.3 120 3-133 15-142 (180)
146 3ux9_B SCFV antibody; five hel 99.7 1.5E-15 5.2E-20 104.3 11.6 125 3-128 18-173 (256)
147 1p6f_A NKP46, natural cytotoxi 99.7 1.8E-15 6.2E-20 103.5 11.9 138 3-156 22-165 (242)
148 2wbj_D OB TCR; transmembrane, 99.7 1.1E-15 3.7E-20 106.5 10.7 130 3-133 40-194 (279)
149 2fbj_H IGA-kappa J539 FAB (hea 99.7 4.3E-15 1.5E-19 100.1 13.3 127 3-132 16-166 (220)
150 2y25_A Myomesin; structural pr 99.7 6.3E-17 2.1E-21 113.9 4.5 139 3-156 22-177 (317)
151 1mju_H Immunoglobulin MS6-12; 99.7 8.1E-15 2.8E-19 99.2 14.5 150 3-154 16-193 (227)
152 3gkz_A Anti-methamphetamine si 99.7 1.6E-14 5.4E-19 99.3 16.2 152 3-156 24-225 (257)
153 3uzq_A Anti-dengue MAB 4E11; d 99.6 1.2E-14 4.2E-19 99.6 15.5 152 3-156 17-220 (253)
154 1dr9_A B7-1 (CD80), T lymphocy 99.6 2E-15 6.8E-20 100.0 10.8 126 3-134 10-150 (201)
155 1ry7_B FGFR-3, fibroblast grow 99.6 3.8E-17 1.3E-21 116.1 2.6 139 4-156 25-193 (334)
156 2rcj_C Light chain; immunoglob 99.6 5E-15 1.7E-19 111.2 14.1 146 3-156 235-397 (523)
157 2v5m_A Dscam; neurobiology SPL 99.6 1.6E-15 5.6E-20 109.6 11.0 139 4-155 21-176 (388)
158 1ccz_A Protein (CD58); LFA-3, 99.6 1.9E-14 6.6E-19 93.4 14.8 120 3-135 11-134 (171)
159 3m8o_H Immunoglobulin A1 heavy 99.6 1.2E-14 4E-19 97.8 14.0 151 3-156 16-200 (221)
160 1gsm_A Madcam-1, mucosal addre 99.6 4.5E-15 1.5E-19 99.2 11.8 112 2-133 22-141 (210)
161 3rjd_A High affinity immunoglo 99.6 8.8E-15 3E-19 100.3 13.4 129 3-156 98-236 (262)
162 3qs7_E FL cytokine receptor; i 99.6 2.9E-15 9.8E-20 110.2 11.6 116 3-132 64-180 (423)
163 3o3u_N Maltose-binding peripla 99.6 2.6E-15 8.7E-20 114.1 11.7 147 3-154 382-551 (581)
164 1za6_B IGG heavy chain; immuno 99.6 3.8E-15 1.3E-19 106.5 11.9 150 3-154 16-193 (344)
165 3kld_A Contactin 4, axcam, BIG 99.6 8.8E-16 3E-20 111.3 8.6 140 4-156 25-170 (384)
166 2ec8_A MAST/stem cell growth f 99.6 2E-15 6.7E-20 113.4 10.8 141 3-157 130-287 (524)
167 4fom_A Poliovirus receptor-rel 99.6 2.9E-16 9.8E-21 110.4 5.9 142 4-156 131-277 (308)
168 3eow_R Poliovirus receptor; im 99.6 4.4E-16 1.5E-20 104.7 6.5 151 3-156 15-189 (221)
169 1itb_B Type 1 interleukin-1 re 99.6 1.5E-16 5.2E-21 112.1 4.4 143 4-156 22-175 (315)
170 1b6u_A KIR2DL3, P58 killer cel 99.6 3.2E-15 1.1E-19 103.2 10.8 138 3-156 22-173 (257)
171 2gjj_A A21 single-chain antibo 99.6 8.5E-15 2.9E-19 101.3 12.8 152 3-156 21-230 (264)
172 1cs6_A Axonin-1; neural cell a 99.6 1.3E-15 4.4E-20 110.0 8.8 141 3-156 23-171 (382)
173 3nl4_H Antigen binding fragmen 99.6 3.9E-15 1.3E-19 99.7 10.5 126 3-131 15-162 (215)
174 1hnf_A CD2; T lymphocyte adhes 99.6 9.5E-15 3.2E-19 95.9 11.9 118 3-132 15-141 (182)
175 3bae_H WO2 IGG2A FAB fragment 99.6 1.3E-14 4.4E-19 98.2 12.9 150 3-154 16-202 (228)
176 2o26_X MAST/stem cell growth f 99.6 7.8E-15 2.7E-19 102.3 12.1 128 3-156 28-158 (290)
177 1bec_A 14.3.D T cell antigen r 99.6 1.7E-14 5.8E-19 98.2 13.3 130 3-134 15-166 (238)
178 3bqu_C 3H6 FAB light chain; be 99.6 2.2E-16 7.4E-21 107.0 3.7 151 3-156 39-212 (233)
179 3p3y_A Neurofascin; IG domains 99.6 2.7E-15 9.2E-20 108.9 9.5 142 3-156 132-288 (404)
180 1qgc_4 Protein (immunoglobulin 99.6 4.1E-15 1.4E-19 109.2 10.4 151 3-156 17-194 (438)
181 2gki_A Nuclease; anti-DNA anti 99.6 2.5E-14 8.5E-19 100.3 13.4 152 3-156 38-248 (291)
182 3liz_H 4C3 monoclonal antibody 99.6 2.3E-14 8E-19 98.4 13.0 149 3-154 16-196 (253)
183 4dkd_C Macrophage colony-stimu 99.6 1.2E-15 4.1E-20 106.3 6.3 139 3-156 105-258 (292)
184 1dn0_B IGM-kappa cold agglutin 99.6 4.1E-14 1.4E-18 96.1 13.7 129 3-133 16-171 (232)
185 1hxm_B Gamma-delta T-cell rece 99.6 2.4E-14 8.3E-19 97.7 12.6 127 3-130 17-173 (242)
186 3v2a_R Vascular endothelial gr 99.6 7.2E-17 2.5E-21 125.9 0.0 153 3-157 565-734 (772)
187 3to4_D NKT vbeta2 (mouse varia 99.6 1.6E-14 5.4E-19 99.2 11.7 128 3-133 17-168 (253)
188 3bn9_D E2 FAB heavy chain; ant 99.6 8.9E-15 3.1E-19 100.9 10.3 127 3-131 16-175 (257)
189 2xqy_G A13-D6.3 monoclonal ant 99.6 3.7E-14 1.3E-18 98.0 13.4 150 3-154 22-201 (261)
190 2j6e_L IGM, FAB light chain; a 99.6 1.8E-15 6.1E-20 102.4 6.7 151 3-156 35-212 (234)
191 2rgs_A I, IG gamma-2B heavy ch 99.6 1.3E-14 4.4E-19 97.6 10.8 122 3-133 27-161 (218)
192 1x9q_A SCFV, 4M5.3 anti-fluore 99.6 2.2E-14 7.5E-19 99.3 12.2 153 3-156 31-245 (268)
193 4fmk_A Poliovirus receptor-rel 99.6 1.3E-14 4.6E-19 96.9 10.7 153 2-156 16-194 (225)
194 1qgc_4 Protein (immunoglobulin 99.6 3.7E-14 1.3E-18 104.1 13.6 145 3-157 132-311 (438)
195 3vh8_G Killer cell immunoglobu 99.6 9.2E-15 3.1E-19 103.2 9.9 138 3-156 134-285 (316)
196 3qs9_E FL cytokine receptor; i 99.6 1.6E-14 5.5E-19 108.9 11.4 136 4-157 156-304 (527)
197 4fqp_A Poliovirus receptor; im 99.6 3.9E-14 1.3E-18 99.9 12.6 153 2-156 15-190 (313)
198 1hzh_H IGG, immunoglobulin hea 99.6 9.1E-14 3.1E-18 102.8 15.0 150 3-154 16-205 (457)
199 3v2a_R Vascular endothelial gr 99.6 7E-15 2.4E-19 114.7 9.3 152 3-157 240-395 (772)
200 1c5d_H Monoclonal antibody aga 99.6 5.1E-14 1.8E-18 94.4 12.0 128 3-132 16-165 (215)
201 3o4o_C Interleukin-1 receptor 99.6 6.2E-15 2.1E-19 104.9 7.6 140 3-155 136-310 (339)
202 2wng_A Tyrosine-protein phosph 99.6 9.7E-15 3.3E-19 103.5 8.6 143 3-156 133-296 (327)
203 2wqr_A IG epsilon chain C regi 99.6 2.5E-14 8.5E-19 101.4 10.1 145 3-156 129-297 (323)
204 1z7z_I Intercellular adhesion 99.6 1.7E-14 5.9E-19 106.3 9.4 131 3-156 15-155 (450)
205 3vh8_G Killer cell immunoglobu 99.5 1.1E-14 3.7E-19 102.9 7.6 135 3-156 39-187 (316)
206 1oga_E TRBC1, T-cell receptor 99.5 7.4E-14 2.5E-18 95.8 11.2 129 3-133 19-167 (252)
207 1ypz_F T-cell receptor gamma c 99.5 1.2E-13 4.1E-18 93.6 11.6 129 3-132 17-174 (230)
208 3fku_X Neutralizing antibody F 99.5 1.6E-13 5.5E-18 95.6 11.9 151 3-156 16-224 (280)
209 1igt_B IGG2A intact antibody - 99.5 4.5E-13 1.5E-17 98.8 14.5 150 3-154 16-195 (444)
210 3ejj_X Macrophage colony-stimu 99.5 7.2E-14 2.4E-18 97.1 9.7 134 3-156 20-157 (289)
211 2vol_A Murine IGG FC; FC, zinc 99.5 5.5E-14 1.9E-18 93.8 8.5 122 3-133 19-153 (207)
212 1bih_A Hemolin; insect immunit 99.5 3.7E-13 1.3E-17 97.4 13.3 145 4-157 117-284 (395)
213 3qhz_H Human monoclonal antibo 99.5 4.8E-13 1.6E-17 90.6 13.0 150 3-154 16-205 (232)
214 1z7z_I Intercellular adhesion 99.5 1.7E-13 5.8E-18 101.0 11.0 138 3-156 102-257 (450)
215 3knb_B Obscurin-like protein 1 99.5 1.8E-13 6.2E-18 82.1 8.9 78 3-90 29-107 (107)
216 1ypz_E T cell receptor delta, 99.5 1.9E-12 6.7E-17 86.4 14.7 143 3-151 17-180 (207)
217 1iga_A IGA1; immunoglobulin; N 99.5 1.6E-12 5.3E-17 96.8 15.4 126 3-131 17-169 (475)
218 3tv3_H PGT128 heavy chain, IG 99.5 7.7E-13 2.6E-17 90.1 12.5 126 3-130 16-181 (239)
219 2oz4_A Intercellular adhesion 99.5 1.7E-13 5.9E-18 94.4 8.5 107 3-131 114-225 (265)
220 3u2s_H PG9 heavy chain; greek 99.5 1.7E-12 5.7E-17 89.0 13.2 126 3-130 15-182 (248)
221 1igy_B IGG1 intact antibody MA 99.5 9.4E-14 3.2E-18 102.1 7.0 150 3-154 15-191 (434)
222 2w59_A IGY FCU3-4; immunoglobu 99.5 6.1E-13 2.1E-17 90.2 10.4 122 3-134 29-163 (231)
223 3m45_A Cell adhesion molecule 99.5 1.5E-12 5.1E-17 77.7 10.5 87 3-90 22-108 (108)
224 3n9g_H FAB fragment of MAB CR4 99.4 3.1E-12 1.1E-16 86.5 13.2 148 3-154 16-201 (230)
225 1igt_B IGG2A intact antibody - 99.4 1.5E-13 5.2E-18 101.2 7.2 145 4-156 140-318 (444)
226 1i1c_A IGG2A, IG gamma-2A chai 99.4 2.6E-13 8.7E-18 92.6 7.2 122 3-133 33-167 (239)
227 2oz4_A Intercellular adhesion 99.4 2.2E-12 7.6E-17 88.8 11.7 128 3-156 19-155 (265)
228 3rbg_A Cytotoxic and regulator 99.4 1.4E-12 4.9E-17 80.1 9.6 91 3-94 17-107 (124)
229 2xot_A Amphoterin-induced prot 99.4 6.4E-13 2.2E-17 95.8 9.2 98 3-124 262-360 (361)
230 1l6x_A Immunoglobulin gamma-1 99.4 1.4E-12 4.6E-17 86.9 10.0 122 3-133 19-153 (207)
231 2wqr_A IG epsilon chain C regi 99.4 1.1E-12 3.8E-17 92.9 10.0 144 4-156 26-191 (323)
232 4dkd_C Macrophage colony-stimu 99.4 9.7E-14 3.3E-18 96.6 4.5 133 3-156 20-157 (292)
233 3mjg_X Beta-type platelet-deri 99.4 2.1E-13 7.2E-18 94.9 6.1 131 3-156 111-255 (289)
234 2kkq_A Myotilin; unknown funct 99.4 3.4E-12 1.2E-16 77.6 9.9 82 3-92 31-113 (116)
235 2eo9_A Roundabout homolog 1; b 99.4 2.1E-12 7.2E-17 78.6 8.9 92 3-106 24-116 (118)
236 2cqv_A MLCK, myosin light chai 99.4 8E-12 2.7E-16 75.5 11.4 83 3-95 23-106 (114)
237 3mjg_X Beta-type platelet-deri 99.4 2.1E-12 7E-17 89.8 9.8 111 3-129 16-132 (289)
238 3knb_A Titin; IG-like, titin, 99.4 2.7E-12 9.3E-17 76.0 8.9 77 3-87 21-98 (100)
239 2yuz_A Myosin-binding protein 99.4 3.5E-12 1.2E-16 75.5 9.2 75 4-91 24-98 (100)
240 1he7_A High affinity nerve gro 99.4 3.1E-12 1.1E-16 78.6 8.7 79 4-91 17-102 (126)
241 1iga_A IGA1; immunoglobulin; N 99.4 5.5E-12 1.9E-16 93.8 11.6 124 3-135 263-396 (475)
242 1g1c_A Immunoglobulin-like dom 99.4 6.7E-12 2.3E-16 73.8 9.7 76 3-87 21-97 (99)
243 3iu4_H CHP3 FAB heavy chain; a 99.4 1E-11 3.4E-16 85.9 11.8 121 3-125 16-163 (263)
244 1fhg_A Telokin; immunoglobulin 99.4 7.6E-12 2.6E-16 79.7 10.4 85 3-96 57-142 (154)
245 3sob_H Antibody heavy chain, l 99.4 3.1E-11 1E-15 82.9 14.0 121 3-125 39-190 (256)
246 2aty_A Complement receptor chi 99.4 9.9E-12 3.4E-16 90.1 11.9 122 3-132 184-317 (376)
247 2kdg_A Myotilin; immonoglobuli 99.4 1E-11 3.4E-16 73.2 9.6 77 3-88 21-98 (100)
248 2lu7_A Obscurin-like protein 1 99.4 7.9E-12 2.7E-16 71.6 8.7 72 3-88 12-83 (84)
249 1hzh_H IGG, immunoglobulin hea 99.4 2.1E-12 7.2E-17 95.5 8.0 122 4-133 149-295 (457)
250 1igy_B IGG1 intact antibody MA 99.3 4.9E-13 1.7E-17 98.3 4.4 146 3-156 135-308 (434)
251 2dm2_A Palladin; beta-sandwich 99.3 9.3E-12 3.2E-16 74.7 8.9 81 3-91 24-105 (110)
252 1wwb_X Protein (brain derived 99.3 7.6E-12 2.6E-16 74.4 8.1 78 4-90 18-100 (103)
253 1z9m_A GAPA225; nectin-like, I 99.3 2.4E-11 8.2E-16 76.6 10.3 89 3-92 54-142 (145)
254 3mtr_A N-CAM-1, NCAM-1, neural 99.3 5.3E-11 1.8E-15 79.5 12.2 141 3-155 34-185 (215)
255 3mlr_H Human monoclonal anti-H 99.3 4.9E-11 1.7E-15 80.5 12.1 121 3-125 16-165 (226)
256 1za6_B IGG heavy chain; immuno 99.3 5.2E-12 1.8E-16 90.2 7.7 121 3-133 136-286 (344)
257 3irg_B Obscurin-like protein 1 99.3 2E-11 7E-16 72.7 9.0 78 3-90 29-107 (107)
258 1hxm_A Gamma-delta T-cell rece 99.3 1.1E-10 3.6E-15 79.2 13.6 143 3-150 17-180 (229)
259 2edj_A Roundabout homolog 2; K 99.3 2.1E-11 7.3E-16 71.8 8.9 75 3-89 24-99 (100)
260 3qp3_A Titin; I-SET IG-like, s 99.3 4.2E-11 1.4E-15 70.9 10.2 76 3-88 24-100 (103)
261 2e7c_A Myosin-binding protein 99.3 4.6E-11 1.6E-15 72.6 10.4 77 3-90 40-117 (118)
262 1u2h_A APEG-1, aortic preferen 99.3 3.8E-11 1.3E-15 70.5 9.3 76 3-87 21-97 (99)
263 1zvo_C Myeloma immunoglobulin 99.3 2.2E-10 7.6E-15 86.1 15.3 128 3-131 16-177 (512)
264 4acp_A IG gamma-1 chain C regi 99.3 2.2E-11 7.5E-16 83.1 8.9 121 3-132 40-173 (240)
265 3puc_A Titin; I-SET IG-like do 99.3 7.6E-11 2.6E-15 69.2 10.0 75 3-87 22-97 (99)
266 2dm3_A KIAA0992 protein, palla 99.3 1.2E-11 4.2E-16 74.1 6.3 80 3-91 25-105 (110)
267 2cr6_A KIAA1556 protein, obscu 99.2 2.3E-11 8E-16 73.6 7.0 82 3-96 29-110 (115)
268 2bk8_A Connectin, M1, titin he 99.2 1.2E-10 4.2E-15 68.2 9.9 74 3-86 17-92 (97)
269 3f8u_B Tapasin; endoplasmic re 99.2 1.5E-10 5E-15 84.0 12.0 78 51-129 252-335 (401)
270 3kvq_A Vascular endothelial gr 99.2 6.2E-11 2.1E-15 70.7 8.5 77 3-91 26-103 (108)
271 1wit_A Twitchin 18TH IGSF modu 99.2 8.6E-11 2.9E-15 68.3 8.5 73 3-86 18-92 (93)
272 3c6l_A TCR 2W20 alpha chain; T 98.9 9.5E-13 3.2E-17 86.4 0.0 126 3-135 16-154 (185)
273 2lvc_A Obscurin-like protein 1 99.2 4.4E-11 1.5E-15 69.5 7.0 60 4-74 23-82 (91)
274 1gxe_A Myosin binding protein 99.2 8.9E-11 3E-15 73.6 8.6 83 3-86 34-137 (139)
275 1ow0_A IG alpha-1 chain C regi 99.2 2E-12 6.8E-17 86.6 1.0 124 3-135 20-153 (214)
276 2yuv_A Myosin-binding protein 99.2 2.2E-10 7.5E-15 67.5 9.8 74 3-90 24-97 (100)
277 2edf_A Obscurin; beta-sandwich 99.2 1E-10 3.5E-15 69.3 7.8 76 3-92 24-99 (103)
278 2nzi_A Titin; IG-domain, FNIII 99.2 5.5E-10 1.9E-14 78.0 12.8 117 3-129 120-249 (305)
279 3u1s_H FAB PGT145 heavy chain; 99.2 8.6E-10 2.9E-14 76.3 13.5 125 3-131 39-208 (267)
280 2qsq_A Carcinoembryonic antige 99.2 1.6E-10 5.5E-15 69.6 8.5 82 3-88 16-109 (111)
281 2dav_A SLOW MYBP-C, myosin-bin 99.2 6.5E-10 2.2E-14 68.3 11.3 80 3-88 23-111 (126)
282 3irg_A Titin; IG-like, titin, 99.2 3.3E-10 1.1E-14 66.4 9.7 76 3-86 21-97 (100)
283 1zvo_C Myeloma immunoglobulin 99.2 4.6E-10 1.6E-14 84.4 12.8 121 3-135 313-447 (512)
284 1iam_A ICAM-1, CD54, intercell 99.2 9.2E-10 3.1E-14 72.1 12.6 79 54-135 51-133 (185)
285 1x44_A Myosin-binding protein 99.2 2.4E-10 8.3E-15 67.7 9.0 75 3-91 23-99 (103)
286 2ckn_A Basic fibroblast growth 99.2 1.5E-10 5.2E-15 67.6 8.0 68 3-85 25-93 (95)
287 1wwc_A Protein (NT-3 growth fa 99.2 1.5E-10 5E-15 70.3 8.1 77 5-90 23-103 (118)
288 1nct_A Titin; cell adhesion, g 99.2 4.7E-11 1.6E-15 71.3 5.4 74 3-86 30-104 (106)
289 1waa_A Titin; metal binding pr 99.2 3.7E-10 1.3E-14 65.8 9.1 71 3-87 21-91 (93)
290 4hwu_A Fibroblast growth facto 99.2 4.5E-10 1.5E-14 65.4 9.5 72 3-90 17-89 (95)
291 2cpc_A KIAA0657 protein; immun 99.2 2.4E-10 8E-15 68.8 8.5 77 4-94 30-106 (113)
292 2cr3_A Basic fibroblast growth 99.2 2.5E-10 8.6E-15 67.2 8.4 58 3-75 19-76 (99)
293 3caf_A Fibroblast growth facto 99.2 3.6E-11 1.2E-15 70.8 4.6 74 3-85 24-98 (100)
294 2e6p_A Obscurin-like protein 1 99.2 1.5E-10 5.1E-15 68.6 7.4 75 3-91 26-100 (104)
295 3cx2_A Myosin-binding protein 99.2 1E-10 3.5E-15 70.0 6.6 79 3-87 20-107 (108)
296 2yr3_A Myosin light chain kina 99.1 7.4E-11 2.5E-15 69.3 5.8 60 3-75 27-86 (99)
297 3rgv_A YAE62 TCR A chain; TCR, 99.1 1.9E-10 6.5E-15 76.3 8.1 132 3-136 16-156 (200)
298 1mq8_A ICAM-1, intercellular a 99.1 7.6E-11 2.6E-15 82.6 6.5 131 4-150 103-248 (291)
299 2bnu_A TCR alpha chain, T-cell 99.1 6.1E-10 2.1E-14 74.1 10.5 117 3-123 16-147 (203)
300 2r15_A Myomesin-1; sarcomeric 99.1 7.7E-10 2.6E-14 73.3 10.9 77 3-88 133-210 (212)
301 2eny_A Obscurin; beta-sandwich 99.1 1.6E-10 5.5E-15 68.7 6.4 76 3-91 24-100 (104)
302 3s35_X Vascular endothelial gr 99.1 4.1E-10 1.4E-14 68.6 8.3 90 3-96 24-118 (122)
303 2k1m_A Myosin-binding protein 99.1 7.5E-10 2.6E-14 64.6 9.1 71 3-87 24-94 (95)
304 3q0h_A T cell immunoreceptor w 99.1 3.5E-10 1.2E-14 68.7 7.9 86 3-93 19-113 (117)
305 2edn_A Myosin-binding protein 99.1 1.9E-10 6.7E-15 69.8 6.6 81 3-89 28-117 (118)
306 3tjh_C 42F3 alpha; IG MHC, ant 99.1 9.9E-10 3.4E-14 74.1 10.4 133 3-137 25-170 (226)
307 3mbe_C I-AG7; T cell receptor, 99.1 1.6E-09 5.3E-14 73.3 11.4 131 3-137 17-158 (229)
308 2edh_A Obscurin; structural ge 99.1 1.3E-09 4.3E-14 65.6 9.9 75 3-92 35-109 (113)
309 2e7b_A Obscurin; IG-like domai 99.1 6.4E-10 2.2E-14 65.8 8.1 75 3-91 24-98 (103)
310 2dlt_A Myosin binding protein 99.1 3.4E-10 1.2E-14 67.4 6.7 73 3-87 24-96 (106)
311 2edk_A Myosin-binding protein 99.1 1.1E-10 3.7E-15 68.9 4.4 77 4-90 25-101 (101)
312 1gl4_B Basement membrane-speci 99.1 9.2E-10 3.1E-14 64.5 8.5 69 3-86 26-96 (98)
313 2dku_A KIAA1556 protein; beta- 99.1 1.7E-09 5.8E-14 63.9 9.6 75 3-91 24-98 (103)
314 2eo1_A OBSCN protein, cDNA FLJ 99.1 8.9E-10 3E-14 65.0 8.3 73 4-90 28-100 (102)
315 4gos_A V-SET domain-containing 99.1 5.4E-10 1.8E-14 68.7 7.1 86 2-88 20-118 (125)
316 1pd6_A Cardiac MYBP-C;, myosin 99.1 1.9E-09 6.4E-14 64.1 9.1 60 3-72 32-91 (104)
317 3rbs_A Myomesin-1; immunoglobu 99.0 1.2E-09 4E-14 72.8 8.8 61 3-75 132-193 (207)
318 2q86_A Valpha14 TCR; INKT cell 99.0 1.3E-09 4.4E-14 73.9 9.0 122 3-126 17-147 (229)
319 1pko_A Myelin oligodendrocyte 99.0 5.9E-09 2E-13 65.0 11.3 86 3-88 22-121 (139)
320 2e6q_A Obscurin-like protein 1 99.0 3.5E-09 1.2E-13 63.7 9.8 83 3-91 24-108 (112)
321 3knb_B Obscurin-like protein 1 99.0 2.2E-10 7.5E-15 68.5 4.4 67 89-157 13-83 (107)
322 3knb_A Titin; IG-like, titin, 99.0 1.8E-10 6.1E-15 68.1 3.7 67 89-157 5-77 (100)
323 2jll_A NCAM2, neural cell adhe 99.0 8.3E-09 2.8E-13 74.4 13.3 117 3-130 116-239 (389)
324 4ei6_A Valpha1 XV19 type II na 99.0 1.3E-09 4.5E-14 72.6 8.1 134 3-138 18-163 (208)
325 3bfo_A Mucosa-associated lymph 99.0 6.7E-10 2.3E-14 64.2 5.9 56 3-77 19-74 (91)
326 1oga_D T-cell receptor alpha c 99.0 4.3E-09 1.5E-13 70.6 10.6 118 3-123 17-144 (215)
327 2ptt_A CD48 antigen; CD244, CD 99.0 3.1E-09 1E-13 63.6 8.8 82 3-87 19-107 (110)
328 1jhl_L IGG1-kappa D11.15 FV (l 99.0 2.3E-09 7.8E-14 64.0 8.1 72 3-75 17-93 (108)
329 3gsn_A RA14 TCR alpha chain (T 99.0 1.9E-10 6.5E-15 76.2 3.6 128 3-137 16-157 (199)
330 2dm7_A KIAA1556 protein; beta- 99.0 4E-09 1.4E-13 62.8 8.8 74 3-91 24-97 (108)
331 1lp9_E T-cell receptor alpha c 99.0 1.4E-09 4.6E-14 71.9 7.0 117 3-123 17-148 (194)
332 1zox_A CLM-1; IG-superfamily, 99.0 7.3E-09 2.5E-13 62.2 9.6 88 3-90 17-112 (113)
333 1neu_A Myelin P0 protein; stru 99.0 5E-09 1.7E-13 63.8 9.0 88 3-90 15-121 (124)
334 2lvc_A Obscurin-like protein 1 99.0 5.9E-10 2E-14 64.7 4.5 68 89-157 4-75 (91)
335 3bn3_B ICAM-5, intercellular a 99.0 1.5E-08 5.1E-13 66.8 11.5 116 2-135 17-136 (196)
336 3udw_C Poliovirus receptor; PV 99.0 4.4E-09 1.5E-13 63.3 8.3 88 3-90 16-118 (118)
337 2iep_A Muscle-specific kinase 99.0 2E-09 7E-14 70.1 7.2 75 3-90 116-192 (192)
338 2v9r_A Roundabout homolog 1; p 99.0 3.4E-09 1.2E-13 70.1 8.2 81 3-96 127-210 (212)
339 2v5y_A Receptor-type tyrosine- 99.0 6.6E-09 2.3E-13 81.2 10.9 138 3-156 92-236 (731)
340 2or8_A Hepatitis A virus cellu 98.9 3.1E-09 1E-13 64.1 7.0 89 3-91 13-112 (116)
341 2ens_A Advanced glycosylation 98.9 7.1E-10 2.4E-14 64.8 4.0 54 3-75 26-79 (96)
342 2v5t_A NCAM2, N-CAM 2, neural 98.9 8.2E-09 2.8E-13 67.0 9.4 73 3-87 114-187 (189)
343 1zxq_A ICAM-2, intercellular a 98.9 5.3E-08 1.8E-12 63.8 13.1 79 54-135 53-135 (192)
344 1kgc_D T-cell receptor alpha c 98.9 1.6E-08 5.4E-13 67.4 10.7 116 3-123 15-146 (206)
345 3so5_A LIG-3, leucine-rich rep 98.9 8.7E-09 3E-13 61.3 8.6 80 3-86 26-111 (112)
346 2wv3_A Neuroplastin; igcam, me 98.9 3.6E-08 1.2E-12 64.2 12.1 79 3-87 108-189 (190)
347 2q20_A VK1 O18/O8 germline lig 98.9 6.1E-09 2.1E-13 62.2 7.8 72 3-75 19-95 (109)
348 2ak4_D SB27 T cell receptor al 98.9 2.8E-08 9.5E-13 66.4 11.7 117 3-123 19-151 (211)
349 2eys_A NKT15; natural killer T 98.9 1.9E-08 6.5E-13 67.2 10.8 119 3-125 19-152 (210)
350 1mqk_L Antibody 7E2 FV fragmen 98.9 6.4E-09 2.2E-13 63.4 7.6 72 3-75 17-93 (120)
351 1eaj_A Coxsackie virus and ade 98.9 4.5E-09 1.5E-13 63.9 6.9 86 3-88 21-125 (126)
352 2v44_A NCAM2, neural cell adhe 98.9 1.2E-08 4.1E-13 66.4 9.3 73 3-86 112-185 (189)
353 2a38_A Titin; Z1Z2, structural 98.9 1.1E-08 3.8E-13 66.7 9.1 74 3-86 119-193 (194)
354 2cqv_A MLCK, myosin light chai 98.9 2.9E-09 1E-13 64.1 5.9 66 89-156 7-76 (114)
355 2nw2_A ELS4 TCR alpha chain; T 98.9 3.4E-08 1.2E-12 65.5 11.5 118 3-123 15-144 (200)
356 2j8h_A Titin, connectin; cardi 98.9 1.3E-08 4.4E-13 66.6 9.3 74 3-86 120-195 (197)
357 3kvq_A Vascular endothelial gr 98.9 1.6E-09 5.4E-14 64.5 4.4 72 83-156 4-77 (108)
358 4frw_A Poliovirus receptor-rel 98.9 2.9E-08 9.8E-13 65.5 11.0 77 3-88 134-211 (218)
359 4gjt_B Poliovirus receptor-rel 98.9 2.5E-08 8.4E-13 60.9 9.5 86 2-87 15-116 (123)
360 2oyp_A Hepatitis A virus cellu 98.9 1.3E-08 4.6E-13 60.4 8.0 85 3-87 10-107 (109)
361 2ifg_A High affinity nerve gro 98.9 9.4E-09 3.2E-13 73.5 8.6 77 4-89 263-346 (347)
362 2lu7_A Obscurin-like protein 1 98.9 1.7E-09 5.7E-14 61.8 3.7 57 100-157 5-65 (84)
363 2q87_A CMRF35-H antigen; all-b 98.9 6E-09 2.1E-13 62.3 6.4 88 3-90 12-108 (110)
364 2or7_A T-cell immunoglobulin a 98.9 1E-08 3.5E-13 61.8 7.4 86 3-89 13-109 (115)
365 2yd6_A PTPRD protein; hydrolas 98.9 1.7E-08 5.7E-13 67.1 9.1 82 3-91 124-207 (212)
366 2edo_A CD48 antigen; beta-sand 98.9 7.6E-09 2.6E-13 63.1 6.8 86 3-91 20-113 (121)
367 1qfw_M FV, antibody (anti beta 98.9 5.2E-09 1.8E-13 62.5 5.9 72 3-75 17-93 (108)
368 2vr9_A Roundabout 1, ROBO; imm 98.9 1.1E-08 3.9E-13 67.9 8.2 69 3-76 124-193 (217)
369 2x1w_L Vascular endothelial gr 98.9 3E-08 1E-12 66.0 10.2 86 3-92 121-211 (213)
370 2c1o_A IGK-C protein; FAB frag 98.9 2.2E-09 7.6E-14 73.2 4.6 93 60-156 11-126 (254)
371 2ckn_A Basic fibroblast growth 98.9 4.2E-09 1.4E-13 61.3 5.1 57 99-156 17-73 (95)
372 4fa8_A Secreted protein BARF1; 98.9 4.3E-09 1.5E-13 69.9 5.8 73 3-81 122-194 (203)
373 3r0n_A Poliovirus receptor-rel 98.8 2.1E-08 7.3E-13 61.5 8.4 77 3-79 18-119 (128)
374 1i8k_A Epidermal growth factor 98.8 9E-09 3.1E-13 61.3 6.4 72 3-75 17-93 (107)
375 3qp3_A Titin; I-SET IG-like, s 98.8 1.9E-09 6.5E-14 63.6 3.2 66 89-156 8-77 (103)
376 2ny1_B T-cell surface glycopro 98.8 2.3E-08 7.8E-13 64.9 8.6 69 3-91 113-182 (184)
377 1h5b_A Murine T cell receptor 98.8 3.8E-08 1.3E-12 59.1 8.9 71 3-75 17-93 (113)
378 2e27_L Anti-ciguatoxin antibod 98.8 9.1E-09 3.1E-13 62.6 6.1 72 3-75 19-95 (119)
379 1b6u_A KIR2DL3, P58 killer cel 98.8 1.2E-08 4E-13 70.3 7.3 113 3-129 122-240 (257)
380 3jz7_A MCAR, CAR, coxsackievir 98.8 5.9E-09 2E-13 68.9 5.6 73 3-87 137-211 (214)
381 1epf_A NCAM, protein (neural c 98.8 1.5E-08 5E-13 66.0 7.4 63 3-76 116-178 (191)
382 3zyj_A Leucine-rich repeat-con 98.8 1.5E-08 5.1E-13 74.8 8.2 79 3-91 357-436 (440)
383 3r4d_A CEA-related cell adhesi 98.8 1.4E-08 4.9E-13 66.9 7.3 76 3-91 126-203 (208)
384 1hkf_A NKP44, NK cell activati 98.8 7E-08 2.4E-12 58.9 9.8 85 3-87 26-120 (122)
385 2id5_A Lingo-1, leucine rich r 98.8 1.1E-08 3.6E-13 76.2 7.2 74 3-86 401-475 (477)
386 1g1c_A Immunoglobulin-like dom 98.8 6.8E-09 2.3E-13 60.7 5.0 57 100-156 14-75 (99)
387 3u6r_L Antibody 1:7 (light cha 98.8 1.4E-08 4.9E-13 63.8 6.6 72 3-75 16-92 (143)
388 1wit_A Twitchin 18TH IGSF modu 98.8 2.7E-09 9.1E-14 61.9 3.0 67 89-157 2-72 (93)
389 1olz_A Semaphorin 4D; developm 98.8 5.3E-09 1.8E-13 80.7 5.4 101 3-117 549-655 (663)
390 2v9t_A Roundabout homolog 1; s 98.8 7.4E-09 2.5E-13 62.5 5.0 81 3-88 25-109 (117)
391 2va4_A NCAM2, N-CAM 2, neural 98.8 6.4E-08 2.2E-12 62.8 9.9 81 3-86 110-191 (192)
392 3s97_C Contactin-1; carbonic a 98.8 2.3E-08 8E-13 65.4 7.8 71 3-87 129-200 (201)
393 2yd1_A Tyrosine-protein phosph 98.8 2.5E-08 8.5E-13 66.2 8.0 75 3-90 126-202 (212)
394 1i3g_L Antibody FV fragment; a 98.8 1.4E-08 4.8E-13 60.9 6.1 72 3-75 20-96 (111)
395 2kdg_A Myotilin; immonoglobuli 98.8 5.9E-09 2E-13 61.1 4.4 66 89-156 5-75 (100)
396 1waa_A Titin; metal binding pr 98.8 1.5E-08 5.2E-13 58.8 6.1 57 99-156 13-73 (93)
397 3rrq_A Protein PD-1, programme 98.8 8.8E-08 3E-12 59.0 9.7 89 3-91 17-118 (129)
398 3lcy_A Titin; A-BAND, IG tande 98.8 5.7E-08 1.9E-12 63.3 9.3 75 3-87 119-195 (197)
399 1ncn_A T lymphocyte activation 98.8 1.5E-07 5.1E-12 56.1 10.4 71 2-75 9-91 (110)
400 2yr3_A Myosin light chain kina 98.8 2E-09 6.8E-14 63.1 2.0 67 88-156 10-77 (99)
401 2edj_A Roundabout homolog 2; K 98.8 1E-08 3.4E-13 60.1 5.0 66 89-156 8-75 (100)
402 3mj6_A Junctional adhesion mol 98.8 3.3E-08 1.1E-12 67.8 8.2 104 3-108 134-256 (268)
403 3b5h_A Cervical EMMPRIN, HAB18 98.8 6.4E-08 2.2E-12 62.6 9.0 77 3-86 99-181 (184)
404 2eo9_A Roundabout homolog 1; b 98.8 1.8E-08 6.2E-13 60.9 6.0 67 89-157 8-76 (118)
405 3khq_A B-cell antigen receptor 98.8 6.8E-08 2.3E-12 59.9 8.6 84 3-93 33-122 (133)
406 2cry_A KIN of IRRE-like protei 98.8 1.4E-09 4.9E-14 66.3 0.9 77 3-86 29-111 (122)
407 2d9c_A Signal-regulatory prote 98.8 4.2E-08 1.4E-12 60.9 7.6 85 3-90 24-123 (136)
408 3qjh_A 5C.C7 alpha chain; immu 98.8 1.7E-07 5.9E-12 62.3 10.9 112 3-120 19-141 (205)
409 3puc_A Titin; I-SET IG-like do 98.7 1.8E-08 6.3E-13 58.7 5.5 57 100-156 15-75 (99)
410 1xau_A B- and T-lymphocyte att 98.7 1.4E-07 4.7E-12 55.6 9.0 69 4-75 31-101 (122)
411 3zyi_A Leucine-rich repeat-con 98.7 1.4E-08 4.8E-13 75.1 6.1 77 3-90 368-445 (452)
412 1u2h_A APEG-1, aortic preferen 98.7 1.5E-08 5.1E-13 59.2 5.1 57 100-156 14-75 (99)
413 2nms_A CMRF35-like-molecule 1; 98.7 1.4E-07 4.6E-12 57.8 9.6 88 3-90 18-113 (124)
414 4i0k_A CD276 antigen; immunogl 98.7 8.2E-08 2.8E-12 63.9 9.3 84 3-94 126-212 (222)
415 2cr6_A KIAA1556 protein, obscu 98.7 2.5E-09 8.6E-14 64.5 1.6 72 83-156 6-83 (115)
416 2frg_P TREM-like transcript-1; 98.7 2.4E-07 8.2E-12 55.1 10.1 88 3-90 13-105 (106)
417 2bk8_A Connectin, M1, titin he 98.7 4.7E-08 1.6E-12 56.9 6.9 58 99-156 9-71 (97)
418 1f2q_A High affinity immunoglo 98.7 4.5E-08 1.5E-12 63.1 7.4 71 3-91 101-174 (176)
419 1j05_L T84.66 antibody, anti-C 98.7 2.4E-08 8.3E-13 59.8 5.7 72 3-75 17-97 (111)
420 3bfo_A Mucosa-associated lymph 98.7 2.8E-08 9.7E-13 57.2 5.8 52 100-156 12-63 (91)
421 2yc1_B Single chain antibody f 98.7 3.6E-08 1.2E-12 62.1 6.6 85 3-88 32-123 (146)
422 2e6q_A Obscurin-like protein 1 98.7 1E-08 3.5E-13 61.7 3.9 57 99-157 16-86 (112)
423 3qr2_A Basigin; CD147, EMMPRIN 98.7 5.1E-09 1.7E-13 65.1 2.6 73 3-75 37-112 (137)
424 2ywz_A NEW antigen receptor va 98.7 9.7E-08 3.3E-12 57.2 8.2 68 3-74 16-87 (111)
425 1wwb_X Protein (brain derived 98.7 4.2E-08 1.4E-12 58.0 6.4 54 104-157 14-76 (103)
426 2kkq_A Myotilin; unknown funct 98.7 6.1E-08 2.1E-12 58.5 7.2 67 88-156 14-86 (116)
427 4ffy_L DENV1-E111 single chain 98.7 4.2E-08 1.4E-12 60.2 6.5 72 3-75 17-97 (126)
428 1f97_A Junction adhesion molec 98.7 6E-08 2.1E-12 63.9 7.8 81 3-87 120-206 (212)
429 1fhg_A Telokin; immunoglobulin 98.7 1.2E-08 4.2E-13 64.7 4.2 69 86-156 38-111 (154)
430 2fbo_J V1V2;, variable region- 98.7 5E-08 1.7E-12 66.0 7.5 68 3-75 152-235 (250)
431 2qhl_A Novel immune-type recep 98.7 9.4E-08 3.2E-12 57.2 7.9 72 3-75 15-98 (111)
432 3irg_B Obscurin-like protein 1 98.7 2.5E-08 8.5E-13 59.1 5.2 66 89-156 13-82 (107)
433 2dm2_A Palladin; beta-sandwich 98.7 3.7E-08 1.3E-12 58.7 5.9 66 89-156 8-79 (110)
434 2yuz_A Myosin-binding protein 98.7 4.1E-08 1.4E-12 57.8 6.0 56 99-156 15-74 (100)
435 1eeq_A Kappa-4 immunoglobulin 98.7 5.1E-08 1.8E-12 58.6 6.6 72 3-75 17-99 (114)
436 3shs_A HOC head outer capsid p 98.7 1.2E-06 4.2E-11 60.2 13.9 109 4-133 19-142 (304)
437 1mq8_A ICAM-1, intercellular a 98.7 2.8E-07 9.7E-12 64.5 11.1 116 2-135 14-133 (291)
438 3irg_A Titin; IG-like, titin, 98.7 2.7E-08 9.1E-13 58.1 5.0 58 99-156 13-76 (100)
439 2yz1_A Tyrosine-protein phosph 98.7 5E-08 1.7E-12 59.1 6.4 71 3-75 23-100 (120)
440 3grw_A Fibroblast growth facto 98.7 2.1E-07 7.1E-12 62.7 10.1 90 3-93 130-223 (241)
441 3sgj_C Human FCG3A receptor; r 98.7 9.6E-08 3.3E-12 63.3 8.3 71 3-91 104-177 (204)
442 1ymm_D T cell receptor alpha c 98.7 2.2E-09 7.5E-14 71.6 0.2 118 3-123 17-146 (207)
443 1nko_A Sialic acid binding IG- 98.7 5.7E-08 1.9E-12 59.9 6.6 73 3-75 22-110 (132)
444 1pew_A JTO2, A lambda-6 type i 98.7 4.4E-08 1.5E-12 58.5 5.9 73 3-75 16-94 (109)
445 4f9l_D 20.1 anti-BTN3A1 antibo 98.7 1.5E-07 5.2E-12 63.8 9.0 125 3-128 17-170 (259)
446 1oaq_L Light chain; antibody, 98.7 6.3E-08 2.2E-12 58.8 6.6 72 3-75 16-95 (120)
447 2z35_A T-cell receptor alpha-c 98.7 8.6E-08 3E-12 57.4 7.1 71 3-73 16-92 (112)
448 1ntl_A CRRY-IG; immunology, co 98.7 1.9E-07 6.4E-12 70.9 10.5 120 5-133 361-493 (551)
449 2p1y_A Bispecific alpha/beta T 98.7 9.6E-08 3.3E-12 64.4 8.1 73 3-75 143-221 (238)
450 1xt5_A Variable region-contain 98.7 4.4E-07 1.5E-11 55.9 10.5 71 3-75 20-114 (135)
451 3caf_A Fibroblast growth facto 98.7 1.5E-08 5E-13 59.4 3.5 57 100-156 17-78 (100)
452 1wwc_A Protein (NT-3 growth fa 98.7 5.2E-08 1.8E-12 58.9 6.0 69 83-156 2-78 (118)
453 2e7b_A Obscurin; IG-like domai 98.7 4.2E-08 1.5E-12 57.7 5.5 65 89-156 8-76 (103)
454 1u3h_A T-cell receptor alpha-c 98.1 2.6E-09 8.8E-14 64.1 0.0 72 3-74 15-92 (110)
455 2jjs_C Leukocyte surface antig 98.7 4.2E-08 1.4E-12 59.9 5.4 86 2-89 16-114 (127)
456 1dlf_L Anti-dansyl immunoglobu 98.7 9.1E-08 3.1E-12 57.4 6.7 72 3-75 17-98 (113)
457 3bik_B Programmed cell death p 98.7 1.2E-06 4.2E-11 54.2 12.0 73 3-75 25-105 (134)
458 3bp6_A Programmed cell death p 98.7 1.1E-06 3.8E-11 53.0 11.6 73 3-75 15-95 (117)
459 1ugn_A LIR1, leukocyte immunog 98.6 1.6E-07 5.6E-12 61.6 8.5 64 3-75 116-179 (198)
460 1sy6_A T-cell surface glycopro 98.6 2.9E-08 9.8E-13 65.9 4.6 61 4-77 130-191 (204)
461 2jju_A Signal regulatory prote 98.6 8E-08 2.7E-12 58.9 6.4 70 3-75 19-96 (127)
462 1tvd_A T cell receptor, ES204 98.6 1.8E-07 6E-12 56.4 7.8 72 3-74 16-97 (116)
463 1fnl_A Low affinity immunoglob 98.6 2.2E-07 7.5E-12 59.8 8.7 67 3-87 104-173 (175)
464 2e7c_A Myosin-binding protein 98.6 7.2E-08 2.5E-12 58.2 6.0 57 99-156 32-92 (118)
465 4fmk_A Poliovirus receptor-rel 98.6 4.1E-07 1.4E-11 60.1 10.2 63 6-75 141-203 (225)
466 1pd6_A Cardiac MYBP-C;, myosin 98.6 8.3E-08 2.8E-12 56.8 6.0 66 89-156 15-85 (104)
467 4f80_A Butyrophilin subfamily 98.6 8.8E-08 3E-12 64.1 6.9 75 4-87 135-212 (226)
468 3bia_X T-cell immunoglobulin a 98.6 5.7E-07 1.9E-11 54.1 9.8 73 3-75 12-95 (116)
469 2xt1_B Camelid VHH 9; viral pr 98.6 8.1E-07 2.8E-11 54.0 10.6 71 3-73 18-101 (121)
470 1fo0_A Protein (BM3.3 T cell r 98.6 2.6E-07 9E-12 55.7 8.3 72 3-74 16-95 (116)
471 2dm3_A KIAA0992 protein, palla 98.6 2.6E-08 8.8E-13 59.3 3.7 66 89-156 9-79 (110)
472 2cry_A KIN of IRRE-like protei 98.6 4.4E-09 1.5E-13 64.1 0.3 73 80-155 5-88 (122)
473 3sbw_C Programmed cell death 1 98.6 4.6E-07 1.6E-11 60.2 10.1 79 3-90 132-213 (222)
474 2coq_A NEW antigen receptor va 98.6 1.9E-07 6.4E-12 55.6 7.3 68 3-74 16-87 (108)
475 3ojm_B Fibroblast growth facto 98.6 2.5E-07 8.6E-12 61.7 8.8 84 3-92 134-225 (231)
476 3uto_A Twitchin; kinase, muscl 98.6 2.6E-07 9E-12 70.4 9.8 73 4-86 499-572 (573)
477 3t0v_A Immunoglobulin variable 98.6 2.4E-07 8.2E-12 56.6 7.8 72 3-75 16-94 (123)
478 2oi9_C V beta, T cell receptor 98.6 4.5E-07 1.5E-11 55.2 9.0 72 3-75 17-96 (121)
479 1nct_A Titin; cell adhesion, g 98.6 9.2E-09 3.1E-13 61.2 1.3 66 89-156 14-83 (106)
480 2otu_A FV light chain variable 98.6 4.6E-07 1.6E-11 54.5 8.9 72 3-75 17-98 (115)
481 2pnd_A V-SET and immunoglobuli 98.6 3.9E-07 1.3E-11 55.2 8.4 73 2-74 16-99 (119)
482 1sq2_N Novel antigen receptor; 98.6 1.8E-07 6.1E-12 56.2 6.8 68 3-74 16-87 (113)
483 2dku_A KIAA1556 protein; beta- 98.6 1.2E-07 4.1E-12 55.8 5.9 65 89-156 8-76 (103)
484 1kxv_C Camelid VHH domain CAB1 98.6 6.5E-07 2.2E-11 54.4 9.3 73 3-75 16-100 (121)
485 1jbj_A CD3 epsilon and gamma e 98.6 8.1E-08 2.8E-12 62.7 5.6 52 4-75 124-175 (186)
486 3moq_A NEW antigen receptor va 98.6 2.4E-07 8.2E-12 56.9 7.3 69 3-75 16-88 (126)
487 2dlt_A Myosin binding protein 98.6 7.5E-08 2.6E-12 57.0 4.6 57 99-156 16-76 (106)
488 1x44_A Myosin-binding protein 98.6 1.4E-07 4.9E-12 55.5 5.8 57 99-156 15-77 (103)
489 1he7_A High affinity nerve gro 98.6 1.6E-07 5.5E-12 57.5 6.1 53 105-157 14-77 (126)
490 4hwu_A Fibroblast growth facto 98.6 1.3E-07 4.4E-12 54.8 5.4 55 100-156 10-64 (95)
491 2yc1_A Single chain antibody f 98.6 8.6E-07 2.9E-11 53.4 9.3 72 3-74 16-100 (117)
492 3k0w_A Mucosa-associated lymph 98.6 1.3E-07 4.6E-12 63.0 6.1 67 3-88 134-202 (218)
493 1fo0_B Protein (BM3.3 T cell r 98.6 7E-07 2.4E-11 53.5 8.7 70 3-74 17-95 (112)
494 1gl4_B Basement membrane-speci 98.5 1.4E-07 4.9E-12 54.9 5.4 57 99-156 18-75 (98)
495 2cr3_A Basic fibroblast growth 98.5 3.2E-08 1.1E-12 58.0 2.5 56 100-156 12-67 (99)
496 2e6p_A Obscurin-like protein 1 98.5 9.4E-08 3.2E-12 56.3 4.5 55 101-156 20-78 (104)
497 2yuv_A Myosin-binding protein 98.5 1.4E-07 4.9E-12 55.2 5.2 66 89-156 7-76 (100)
498 3r08_E T-cell surface glycopro 98.5 3.7E-08 1.3E-12 55.7 2.5 51 3-74 15-66 (82)
499 3b9v_A Heavy chain variable do 98.5 1.1E-06 3.7E-11 53.2 9.3 73 3-75 16-101 (120)
500 2k1m_A Myosin-binding protein 98.5 2.3E-07 7.8E-12 53.8 6.0 57 99-156 16-76 (95)
No 1
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.86 E-value=3.4e-20 Score=124.28 Aligned_cols=141 Identities=16% Similarity=0.258 Sum_probs=98.4
Q ss_pred eeEEEeeee-ccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCC-CceEEEEEcccCCCCCeEEEEEEEeCCCceEe
Q psy16425 4 RMLIEIGEM-LMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSE-TKAWYLHIREVRESDRGWYMCQVNTDPMKSQV 81 (163)
Q Consensus 4 ~~~~~~~~~-~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~ 81 (163)
.+.+.|... +.|.|.|.|++ ++..+. ...++.+..+. .+..+|.|.+++.+|+|.|+|.+.| +.....
T Consensus 19 ~v~l~c~~~~~~P~p~i~W~k-ng~~l~--------~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~N-g~a~~~ 88 (207)
T 3rbs_A 19 QVRFWMQAEKLSGNAKVNYIF-NEKEIF--------EGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQD-GKATNH 88 (207)
T ss_dssp CEEEEEECSCCCSCCEEEEEE-TTEEEC--------SSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEE-TTEEEE
T ss_pred eEEEEEEEecCCCCCEEEEEE-CCEECc--------cCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEC-CCeEEE
Confidence 456666654 47999999999 666652 23344433332 3566899999999999999999977 333333
Q ss_pred EEEEEE---------------------cCCcccccCCCCcEEEeCCCcEEEEeEeccC-CCCeEEEEECCeEEEecCCce
Q psy16425 82 GYLEVV---------------------VPPDILDYPTSTDMVIREGSNVTLKCAASGS-PKPNITWRREGGELIAQGNGQ 139 (163)
Q Consensus 82 ~~l~v~---------------------~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p~v~W~~~~~~~~~~~~~~ 139 (163)
..+.+. .+|.+.... ...+.+|+++.|.|.+.|. |.|.+.|++++.++....+..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~---~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~~~~~~~ 165 (207)
T 3rbs_A 89 STVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL---SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHD 165 (207)
T ss_dssp EEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEE---EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCCCCCC
T ss_pred EEEEEEccchhhhcccccccccccccCCCCceEecC---CcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEECCCCCceE
Confidence 333211 133332211 3567899999999999998 999999999999986654433
Q ss_pred E--EeceEEEEcchhhhHhh
Q psy16425 140 E--DFPFFKRTKKKKKKKKK 157 (163)
Q Consensus 140 ~--~~~~l~i~~v~~~~~~~ 157 (163)
. +...|.|.+++++|.+.
T Consensus 166 ~~~~~~~L~I~~v~~~D~G~ 185 (207)
T 3rbs_A 166 FKDGICTLLITEFSKKDAGI 185 (207)
T ss_dssp CSSEEEEEEETTCCGGGCEE
T ss_pred cCCCEEEEEECCCCcccCEE
Confidence 2 34579999999999763
No 2
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.86 E-value=5.9e-20 Score=123.02 Aligned_cols=144 Identities=19% Similarity=0.268 Sum_probs=109.3
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCC-CCCeEEEEEEEeCC-C-ce
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRE-SDRGWYMCQVNTDP-M-KS 79 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~-~d~G~Y~C~~~~~~-~-~~ 79 (163)
..+.|.|...+.|.+.|.|++ ++..+. ....++.......+..+|.|.+++. +|+|.|+|.+.+.. . ..
T Consensus 22 ~~v~l~C~~~g~p~~~v~W~~-~~~~~~-------~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~~~n~~g~~~~ 93 (212)
T 2yd1_A 22 GVASFYCAARGDPPPSIVWRK-NGKKVS-------GTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVAENGVGDAVS 93 (212)
T ss_dssp SCEEEEEEEECSSCCEEEEEE-TTEECC-------TTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEEEECSSSCEEE
T ss_pred CEEEEEEEEccCCCCeEEEEE-CCEECC-------CCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEEEEeCCCCeEE
Confidence 468889999999999999999 554431 2345666655545557899999999 99999999997663 3 45
Q ss_pred EeEEEEEEcC-------CcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecC-CceEEeceEEEEcch
Q psy16425 80 QVGYLEVVVP-------PDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQG-NGQEDFPFFKRTKKK 151 (163)
Q Consensus 80 ~~~~l~v~~~-------p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~-~~~~~~~~l~i~~v~ 151 (163)
..+.|.|... |.+...+ ....+.+|+.+.|.|.+.+.|.|.+.|++++..+.... .....++.|.|.+++
T Consensus 94 ~~~~l~V~~~~~~~~~~p~~~~~~--~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~L~i~~v~ 171 (212)
T 2yd1_A 94 ADATLTIYEGDKTPAGFPVITQGP--GTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYSLKDGFLQIENSR 171 (212)
T ss_dssp EEEEEEEECTTCSCTTCCEEEECC--CCEEEETTCCEEECCEEECSSCCEEEEEETTEECCTTSTTEEEETTEEEECSCC
T ss_pred eeEEEEEecccCCCCCCCeeEeCC--CceEeecCCeEEEEEEeccCCCCeEEEEECCeEcccCCCeEEccCCeEEEccCC
Confidence 5667777765 3444333 34667889999999999999999999999998876532 223456789999999
Q ss_pred hhhHh
Q psy16425 152 KKKKK 156 (163)
Q Consensus 152 ~~~~~ 156 (163)
.+|.+
T Consensus 172 ~~d~G 176 (212)
T 2yd1_A 172 EEDQG 176 (212)
T ss_dssp GGGCE
T ss_pred hhhCE
Confidence 98875
No 3
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.85 E-value=9.5e-21 Score=137.49 Aligned_cols=140 Identities=21% Similarity=0.329 Sum_probs=110.3
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.|.|...+.|.|.+.|++.++..+. ...+ ... .+..|.|.+++.+|+|.|+|.+.|. +.....
T Consensus 221 ~~v~l~C~~~g~P~p~i~W~k~~~~~~~--------~~~~--~~~---~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~ 287 (384)
T 3kld_A 221 TTVKLECFALGNPVPTILWRRADGKPIA--------RKAR--RHK---SNGILEIPNFQQEDAGSYECVAENSRGKNVAK 287 (384)
T ss_dssp SCEEEEEEEEEESCCEEEEEETTCCCCC--------TTCE--ECT---TSCEEEECSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEeecCCCcEEEEeCCCcccc--------ccce--ecC---CCcEEEECCCChhhCEEEEEEEEcCCCeEEEE
Confidence 3678899999999999999996554431 1111 111 1238999999999999999999776 444556
Q ss_pred EEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceEEeceEEEEcchhhhHhh
Q psy16425 82 GYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQEDFPFFKRTKKKKKKKKK 157 (163)
Q Consensus 82 ~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~ 157 (163)
..|.|..+|.+...+ ....+.+|+++.|.|.+.|.|.|.+.|++++..+....+....++.|.|.+++.+|++.
T Consensus 288 ~~l~v~~~P~~~~~~--~~~~v~~g~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L~i~~v~~~D~G~ 361 (384)
T 3kld_A 288 GQLTFYAQPNWVQII--NDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTRDRIQIEQGTLNITIVNLSDAGM 361 (384)
T ss_dssp EEEEEEEEEEEEECC--CCEEECTTCCEEEECEEEEESCCEEEEEETTEECCCBTTEEEETTEEEESSCCGGGCEE
T ss_pred EEEEEecCCccccCC--CceEecCCCCEEEEeECCccCCCeEEEEECCEECCCCccEEEeCCEEEEeecChhhCEE
Confidence 778888888776644 35678899999999999999999999999999987776666677899999999998763
No 4
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.85 E-value=4.1e-20 Score=121.61 Aligned_cols=145 Identities=17% Similarity=0.320 Sum_probs=108.7
Q ss_pred ceeEEEeeeeccC-CCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCC--Cce
Q psy16425 3 ARMLIEIGEMLMA-ESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDP--MKS 79 (163)
Q Consensus 3 ~~~~~~~~~~~~~-~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~--~~~ 79 (163)
..+.|.|...+.+ .+.+.|++.++..+. ....++..........+|.|.+++.+|+|.|+|.+.+.. ...
T Consensus 18 ~~v~l~C~~~~~~~~~~v~W~~~~g~~~~-------~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~ 90 (191)
T 1epf_A 18 ESKFFLCQVAGDAKDKDISWFSPNGEKLS-------PNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSE 90 (191)
T ss_dssp CCEEEEEEECCCSCCCEEEEECTTSCEEC-------CBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTTEEEE
T ss_pred CCEEEEEECCCCCCCceEEEEeCCCcccc-------CCCCeEEEEECCCCceEEEEccCCcccCEEEEEEEEcCCCcceE
Confidence 4688889888876 899999995555442 134556655444456699999999999999999997764 334
Q ss_pred EeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCce---EEeceEEEEcchhhhHh
Q psy16425 80 QVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQ---EDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 80 ~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~---~~~~~l~i~~v~~~~~~ 156 (163)
..+.|.+..+|.+...+ ....+.+|+.+.|.|.+.+.|.|.+.|++++..+....... ..++.|.|.+++.+|.+
T Consensus 91 ~~~~l~v~~~p~~~~~~--~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 168 (191)
T 1epf_A 91 ATVNVKIFQKLMFKNAP--TPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIKKTDEG 168 (191)
T ss_dssp EEEEEEEECCSEEEECC--SSEECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGCCTTEEECTTSCEEETTCCGGGCE
T ss_pred EEEEEEeecCceEecCC--CcEeecCCCeEEEEEEECCCCCCEEEEEECCEEeeccCCceEEEecCCeEEECCCChhhCE
Confidence 45566777777766544 35678899999999999999999999999998875433221 24457999999998875
No 5
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.84 E-value=5.7e-20 Score=121.50 Aligned_cols=146 Identities=21% Similarity=0.259 Sum_probs=107.8
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.|.|...+.|.+.|.|++ ++..+. ....++.......+..+|.|.+++.+|+|.|+|.+.+. +.....
T Consensus 20 ~~v~l~C~~~~~p~~~v~W~~-~~~~~~-------~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~ 91 (197)
T 2j8h_A 20 SNATLVCKVTGHPKPIVKWYR-QGKEII-------ADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSVSGT 91 (197)
T ss_dssp SCEEEEEEEECSSCCEEEEEE-TTEECC-------CCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEEETTEEEEEE
T ss_pred CEEEEEEEEeecCCCEEEEEE-CCEECc-------cCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEEECCCceeEE
Confidence 468889999899999999999 554442 12345555544455668999999999999999999766 334555
Q ss_pred EEEEEEcCCcccccCC---CCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceE----EeceEEEEc-chhh
Q psy16425 82 GYLEVVVPPDILDYPT---STDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQE----DFPFFKRTK-KKKK 153 (163)
Q Consensus 82 ~~l~v~~~p~~~~~~~---~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~----~~~~l~i~~-v~~~ 153 (163)
+.|.|..+|.+..... .....+.+|+.+.|.|.+.+.|.|.+.|++++..+........ ....|.|.+ ++.+
T Consensus 92 ~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~ 171 (197)
T 2j8h_A 92 ASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERK 171 (197)
T ss_dssp EEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECSSSSCEEEECSSEEEEECTTCCCGG
T ss_pred EEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecCCCEEEEEcCCceEEEEeCCCCcc
Confidence 6777776655433221 1245678899999999999999999999999988865544432 346788888 9888
Q ss_pred hHh
Q psy16425 154 KKK 156 (163)
Q Consensus 154 ~~~ 156 (163)
|.+
T Consensus 172 d~G 174 (197)
T 2j8h_A 172 DAG 174 (197)
T ss_dssp GCE
T ss_pred cCE
Confidence 875
No 6
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.84 E-value=3e-19 Score=117.75 Aligned_cols=144 Identities=14% Similarity=0.219 Sum_probs=105.9
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.|.|...+.|.+.+.|++ ++..+ ....++.....+ ...+|.|.+++.+|+|.|+|.+.+. +.....
T Consensus 23 ~~v~l~C~~~~~p~~~v~W~~-~~~~~--------~~~~~~~~~~~~-~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~ 92 (197)
T 3lcy_A 23 EAAQLSCQIVGRPLPDIKWYR-FGKEL--------IQSRKYKMSSDG-RTHTLTVMTEEQEDEGVYTCIATNEVGEVETS 92 (197)
T ss_dssp SEEEEEEEEEEESCCEEEEEE-TTEEE--------CCCSSEEEEESS-SEEEEEEECCSGGGCEEEEEEEECSSCEEEEE
T ss_pred CcEEEEEEEecCCCCEEEEEE-CCEEC--------CCCccEEEEeCC-CEEEEEEecCCccCCEEEEEEEECCCCceeEE
Confidence 468889998889999999999 55544 223444444332 3458999999999999999999765 444555
Q ss_pred EEEEEEcCCccccc-CCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceEE----eceEEEEcchh-hhH
Q psy16425 82 GYLEVVVPPDILDY-PTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQED----FPFFKRTKKKK-KKK 155 (163)
Q Consensus 82 ~~l~v~~~p~~~~~-~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~----~~~l~i~~v~~-~~~ 155 (163)
..+.+...|..... +......+.+|+.+.|.|.+.+.|.|.+.|++++..+......... ...|.|.++++ +|.
T Consensus 93 ~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~ 172 (197)
T 3lcy_A 93 SKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSENITIENTEHYTHLVMKNVQRKTHA 172 (197)
T ss_dssp EEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECSSEEEEEESSCCHHHHC
T ss_pred EEEEEEcCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCCCceEEEEcCCEEEEEEccccchhhC
Confidence 66777766655432 2223566789999999999999999999999999887655544432 26799999985 675
Q ss_pred h
Q psy16425 156 K 156 (163)
Q Consensus 156 ~ 156 (163)
+
T Consensus 173 G 173 (197)
T 3lcy_A 173 G 173 (197)
T ss_dssp E
T ss_pred c
Confidence 4
No 7
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.84 E-value=2.4e-19 Score=117.84 Aligned_cols=142 Identities=16% Similarity=0.263 Sum_probs=104.3
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCc--eE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMK--SQ 80 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~--~~ 80 (163)
..+.|.|...+.|. .+.|++.++..+ ....++.....+ ...+|.|.+++.+|+|.|+|.+.+.... +.
T Consensus 18 ~~v~L~C~~~~~p~-~v~W~~~~~~~~--------~~~~~~~~~~~~-~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~ 87 (189)
T 2v44_A 18 ESKFFTCTAIGEPE-SIDWYNPQGEKI--------ISTQRVVVQKEG-VRSRLTIYNANIEDAGIYRCQATDAKGQTQEA 87 (189)
T ss_dssp CCEEEEEEEEECCS-EEEEECTTSCBC--------CCCSSEEEEEET-TEEEEEECSCCGGGCEEEEEEEECTTSCEEEE
T ss_pred CcEEEEEEeecCCe-eEEEEeCCCCcc--------CCCceEEEECCC-CeEEEEEccCCcccCeEEEEEEEeCCCCcEEE
Confidence 46788898888877 899999555444 223455544433 3458999999999999999999766332 45
Q ss_pred eEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCc--e-EEeceEEEEcchhhhHh
Q psy16425 81 VGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNG--Q-EDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 81 ~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~--~-~~~~~l~i~~v~~~~~~ 156 (163)
.+.|.+..+|.+...+ ....+.+|+.+.|.|.+.+.|.|.+.|++++..+...... . ..++.|.|.+++.+|.+
T Consensus 88 ~~~l~v~~~p~~~~~~--~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G 164 (189)
T 2v44_A 88 TVVLEIYQKLTFREVV--SPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEG 164 (189)
T ss_dssp EEEEEEECCCEEESCC--CSEEEETTSCEEECCEEECSSCCEEEEEEEC--CEECCCTTEEECTTSCEEETTCCGGGCE
T ss_pred EEEEEEecCCceeecC--CcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEeccCCCCEEEecCCcEEEEEcCcccCe
Confidence 5677788787766543 3467889999999999999999999999999887642222 2 24468999999999875
No 8
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.83 E-value=1.1e-18 Score=116.83 Aligned_cols=142 Identities=19% Similarity=0.275 Sum_probs=99.1
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEE-eCCCceEEEEEccc-CCCCCeEEEEEEEeC-CCce
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVT-HSETKAWYLHIREV-RESDRGWYMCQVNTD-PMKS 79 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~-~~~~~~~~L~i~~v-~~~d~G~Y~C~~~~~-~~~~ 79 (163)
..+.|.|...+.|.+.|.|++ ++..+. ..+.... ........|.|.++ +.+|+|.|+|.+.+. +...
T Consensus 22 ~~v~L~C~~~g~p~~~v~W~k-~~~~~~---------~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~n~~g~~~ 91 (212)
T 2yd6_A 22 GVASFICQATGDPRPKIVWNK-KGKKVS---------NQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVASNNVGEIS 91 (212)
T ss_dssp SCEEEEEEEEEESCCEEEEEE-TTEECC---------CTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEEEETTEEEE
T ss_pred CeEEEEEEEeeCCCCEEEEEE-CCcCCC---------CCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEEEcCCCcEE
Confidence 468889999899999999999 554432 1222222 11123457999999 599999999999766 3344
Q ss_pred EeEEEEEEcC-------CcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecC---CceE----EeceE
Q psy16425 80 QVGYLEVVVP-------PDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQG---NGQE----DFPFF 145 (163)
Q Consensus 80 ~~~~l~v~~~-------p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~---~~~~----~~~~l 145 (163)
..+.|.|... |.+...+ ....+.+|+.+.|.|.+.|.|.|.+.|++++..+.... +... ..+.|
T Consensus 92 ~~~~l~V~~~~~~~~~~p~~~~~~--~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~L 169 (212)
T 2yd6_A 92 VSTRLTVLREDQIPRGFPTIDMGP--QLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRSESIGAL 169 (212)
T ss_dssp EEEEEEEECGGGCCTTCCEEEECC--CCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC------CCEEEEEETTEEEE
T ss_pred EEEEEEEeccCccCCCcceeecCC--cceeEecCCCEEEEEEecCCCCCeEEEEECCccccCcCCCceEEEEecCCeEEE
Confidence 5566777653 3333322 34567889999999999999999999999998876542 1111 23789
Q ss_pred EEEcchhhhHh
Q psy16425 146 KRTKKKKKKKK 156 (163)
Q Consensus 146 ~i~~v~~~~~~ 156 (163)
.|.+++.+|.+
T Consensus 170 ~i~~~~~~d~G 180 (212)
T 2yd6_A 170 QIEQSEESDQG 180 (212)
T ss_dssp EECSCCGGGCE
T ss_pred EEcCCCcccCE
Confidence 99999998875
No 9
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.83 E-value=3e-20 Score=124.16 Aligned_cols=152 Identities=18% Similarity=0.241 Sum_probs=94.7
Q ss_pred cceeEEEee---eeccCCCEEEEEEcCCceEEee----eeeEE----ecCCeEEEEeCCCceEEEEEcccCCCCCeEEEE
Q psy16425 2 AARMLIEIG---EMLMAESTVAWLRVDTQTILTI----QTHVI----TKNHRIGVTHSETKAWYLHIREVRESDRGWYMC 70 (163)
Q Consensus 2 ~~~~~~~~~---~~~~~~~~i~W~k~~~~~~~~~----~~~~~----~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 70 (163)
..++.|.|. ..+.|.+.|.|+|.+....... ..... ....++..... .++++|.|.+++.+|+|.|+|
T Consensus 8 Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C 86 (203)
T 4fa8_A 8 GERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRS-ANTFFLVVTAANISHDGNYLC 86 (203)
T ss_dssp TCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEE-TTEEEEEESSCCGGGCEEEEE
T ss_pred CCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEc-CCEEEEEEccCCHHHCeEEEE
Confidence 347888884 4567899999999532211110 00000 11223332222 346789999999999999999
Q ss_pred EEEeC-CCceEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEe----cCCceE-Eece
Q psy16425 71 QVNTD-PMKSQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIA----QGNGQE-DFPF 144 (163)
Q Consensus 71 ~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~----~~~~~~-~~~~ 144 (163)
.+.+. +.....+.|.|..+|.+...+ ....+.+|+++.|.|.+.|.|.|.+.|+++++.+.. ..+... .++.
T Consensus 87 ~a~n~~g~~~~~~~l~V~~p~~~~~~~--~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~~~~r~~~~~~g~ 164 (203)
T 4fa8_A 87 RMKLGETEVTKQEHLSVVKPLTLSVHS--ERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVMKEKDGS 164 (203)
T ss_dssp EEEETTEEEEEEEEEEEEEEEEEEEEE--EECCSSCSCCEEEEEEEEEESCCEEEECCC------------CCEECTTSC
T ss_pred EEEcCCCcEEEEEEEEecCCceeeecc--eeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCcccccceEEEeCCCC
Confidence 99775 344555677777666555433 245577899999999999999999999987765432 122222 2233
Q ss_pred ---EEEEcchhhhHh
Q psy16425 145 ---FKRTKKKKKKKK 156 (163)
Q Consensus 145 ---l~i~~v~~~~~~ 156 (163)
+.|.++..+|.+
T Consensus 165 l~il~i~~v~~~D~G 179 (203)
T 4fa8_A 165 LSVAVDLSLPKPWHL 179 (203)
T ss_dssp EEEEEEEEECSSCCC
T ss_pred EEEEEECCCCHHHCE
Confidence 344688888765
No 10
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.82 E-value=4.8e-19 Score=118.21 Aligned_cols=140 Identities=17% Similarity=0.321 Sum_probs=96.6
Q ss_pred EEEeeeec-cCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCceEeEEE
Q psy16425 6 LIEIGEML-MAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKSQVGYL 84 (163)
Q Consensus 6 ~~~~~~~~-~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~l 84 (163)
.+.|...+ .|.+.|.|++ ++..+. ...++.....+ +..+|.|.+++.+|+|.|+|.+.+. .......+
T Consensus 21 ~l~C~~~~~~p~~~i~W~~-~g~~i~--------~~~~~~~~~~~-~~~~L~i~~v~~~D~G~Y~C~~~n~-~~~~~~~~ 89 (212)
T 2r15_A 21 QLYSFVTYYVEDLKVNWSH-NGSAIR--------YSDRVKTGVTG-EQIWLQINEPTPNDKGKYVMELFDG-KTGHQKTV 89 (212)
T ss_dssp EEEEEBSSCCSSCEEEEEE-TTEECC--------CCSSEEEEEET-TEEEEEEESCCGGGCEEEEEEEECS-SCEEEEEE
T ss_pred EEEEEEeccCCCceEEEEE-CCEEcc--------CCCeEEEEEeC-CEEEEEECCCCcccCEEEEEEEecC-CcceEEEE
Confidence 34444444 3689999999 555542 23455544433 3457999999999999999999764 33333444
Q ss_pred EEEc----------------------CCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceEEe
Q psy16425 85 EVVV----------------------PPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQEDF 142 (163)
Q Consensus 85 ~v~~----------------------~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~ 142 (163)
.+.+ .|.+.... .....+.+|+.+.|.|.+.+.|.|.+.|++++..+..........
T Consensus 90 ~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~ 168 (212)
T 2r15_A 90 DLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGL-PDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTDHCNLKF 168 (212)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHSCEEEEBC-CSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEE
T ss_pred EEEEeeccchhhhccccCcccccccCCCcccccC-CCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccCCCEEEEE
Confidence 4432 23332222 235678899999999999999999999999999887665544322
Q ss_pred -----ceEEEEcchhhhHhh
Q psy16425 143 -----PFFKRTKKKKKKKKK 157 (163)
Q Consensus 143 -----~~l~i~~v~~~~~~~ 157 (163)
..|.|.+++.+|.+.
T Consensus 169 ~~~~~~~L~i~~~~~~d~G~ 188 (212)
T 2r15_A 169 EAGRTAYFTINGVSTADSGK 188 (212)
T ss_dssp ETTTEEEEEESSCCGGGCEE
T ss_pred cCCCEEEEEEcCcchHHCeE
Confidence 389999999998763
No 11
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.82 E-value=2e-19 Score=118.30 Aligned_cols=141 Identities=22% Similarity=0.365 Sum_probs=107.7
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCC-C-ceE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDP-M-KSQ 80 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~-~-~~~ 80 (163)
..+.|.|...+.|.+.|.|++ ++..+. ....++.+...+ ..|.|.+++.+|+|.|+|.+.+.. . ...
T Consensus 23 ~~v~l~C~~~~~p~~~i~W~~-~~~~~~-------~~~~~~~~~~~~---~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 91 (192)
T 2iep_A 23 EVATFMCAVESYPQPEISWTR-NKILIK-------LFDTRYSIRENG---QLLTILSVEDSDDGIYCCTANNGVGGAVES 91 (192)
T ss_dssp SCEEEECCEEEESCCEEEEEE-TTEECC-------TTCTTEEEEGGG---TEEEESSCCGGGCEEEEEEEECSSSCCEEE
T ss_pred CcEEEEeeCCCCCCCeEEEEE-CCEEcc-------ccCccEEEcCCc---cEEEEcCCCcccCeEEEEEEEcCCCceeEe
Confidence 467889999889999999999 554432 223555555433 279999999999999999997653 2 345
Q ss_pred eEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceE-EeceEEEEcchhhhHh
Q psy16425 81 VGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQE-DFPFFKRTKKKKKKKK 156 (163)
Q Consensus 81 ~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~-~~~~l~i~~v~~~~~~ 156 (163)
...+.+..+|.+...+ ....+.+|+.+.|.|.+.+.|.|.+.|++++..+........ ..+.|.|.+++.+|.+
T Consensus 92 ~~~l~v~~~p~~~~~~--~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 166 (192)
T 2iep_A 92 CGALQVKMKPKITRPP--INVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAVLESGSLRIHNVQKEDAG 166 (192)
T ss_dssp EEEEEEEEEEEEEECC--CCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCCSSEEECTTSCEEESSCCGGGCE
T ss_pred EEEEEEEeCCccccCC--cceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCCCcEEEecCCcEEEecCChhhCE
Confidence 5678888877776644 356788999999999999999999999999988765544332 4567999999998875
No 12
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.82 E-value=1.9e-18 Score=120.15 Aligned_cols=141 Identities=18% Similarity=0.295 Sum_probs=107.0
Q ss_pred eeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEeE
Q psy16425 4 RMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQVG 82 (163)
Q Consensus 4 ~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~~ 82 (163)
.+.+.|...+.|.+.+.|++ ++..+. ...++..... .....|.|.+++.+|+|.|+|.+.+. +.....+
T Consensus 116 ~~~l~C~~~g~p~~~v~W~~-~~~~~~--------~~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 185 (284)
T 2rik_A 116 HTRYECKIGGSPEIKVLWYK-DETEIQ--------ESSKFRMSFV-ESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSST 185 (284)
T ss_dssp CEEEEEEEESSSCCEEEEEE-TTEECC--------CSSSEEEEEE-TTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred eEEEEEEEeeeCCCEEEEEE-CCEECc--------CCCcEEEEEc-CCEEEEEECCCCcccCEEEEEEEEcCCCceeEEE
Confidence 57788998889999999999 554432 1222222221 13458999999999999999999766 4455667
Q ss_pred EEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceE--E--eceEEEEcchhhhHh
Q psy16425 83 YLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQE--D--FPFFKRTKKKKKKKK 156 (163)
Q Consensus 83 ~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~--~--~~~l~i~~v~~~~~~ 156 (163)
.|.|..+|.+...+ ....+.+|+++.|.|.+.|.|.|.+.|++++..+........ . ...|.|.+++.+|.+
T Consensus 186 ~l~V~~~p~~~~~~--~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G 261 (284)
T 2rik_A 186 SLKVKEPPVFRKKP--HPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIG 261 (284)
T ss_dssp EEEEECCCBCCSCC--CCEEECTTCCEEEEEECBSSSCCEEEEEETTEEECBTTTEEEEEETTEEEEEECSCCGGGCE
T ss_pred EEEEecCCcceeCC--CcceecCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEEcCCCcccCE
Confidence 78888888776644 356788999999999999999999999999998866554432 1 257899999998875
No 13
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.82 E-value=1.1e-19 Score=119.18 Aligned_cols=143 Identities=22% Similarity=0.315 Sum_probs=102.9
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCc---e
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMK---S 79 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~---~ 79 (163)
.++.|.|...+.|.+.+.|++ ++..+.. ....++.....+ +|.|.+++.+|+|.|+|.+.+.... .
T Consensus 18 ~~v~l~C~~~~~p~~~v~W~~-~~~~~~~------~~~~~~~~~~~~----~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 86 (189)
T 2v5t_A 18 EDAEVVCRVSSSPAPAVSWLY-HNEEVTT------ISDNRFAMLANN----NLQILNINKSDEGIYRCEGRVEARGEIDF 86 (189)
T ss_dssp SCEEECCEEECSSCCEEEEEC------CB------CCCTTEEECTTS----CEEETTCCGGGCEEEEEEEEETTTTEEEE
T ss_pred CcEEEEEEEcCCCCCEEEEEE-CCcccee------ccCCeEEEecCC----CEEEeeCCHhHCcEEEEEEEEcCCCceEE
Confidence 468889998888999999999 4443321 123455554443 7999999999999999999766322 2
Q ss_pred EeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceE--EeceEEEEcchhhhHh
Q psy16425 80 QVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQE--DFPFFKRTKKKKKKKK 156 (163)
Q Consensus 80 ~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~--~~~~l~i~~v~~~~~~ 156 (163)
....+.+..+|.+...+......+.+|+.+.|.|.+.+.|.|.+.|++++..+........ .+..|+|.+++.+|.+
T Consensus 87 ~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 165 (189)
T 2v5t_A 87 RDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGG 165 (189)
T ss_dssp EEEEEEEEEEEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEETTEECCCSSSEEEETTTTEEEECSCCGGGCE
T ss_pred EEEEEEecCCCCcccccccccccccCCCcEEEEEEEccCCCCeEEEEECCEECcCCCcEEEecCCCEEEEcCCChhhCe
Confidence 3445666667666554332245677899999999999999999999999988765544332 3467999999998875
No 14
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.82 E-value=1.3e-18 Score=120.95 Aligned_cols=143 Identities=15% Similarity=0.261 Sum_probs=107.6
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.|.|...+.|.+.|.|++ ++..+. ...++..... .+..+|.|.+++.+|+|.|+|.+.+. +.....
T Consensus 21 ~~v~l~C~~~g~p~~~v~W~~-~~~~~~--------~~~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~ 90 (284)
T 2rik_A 21 ESGTFKCHVTGTAPIKITWAK-DNREIR--------PGGNYKMTLV-ENTATLTVLKVTKGDAGQYTCYASNVAGKDSCS 90 (284)
T ss_dssp CCEEEEEEEESSSCCEEEEEE-TTEECC--------SSSSEEEEEE-TTEEEEEESSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEEcCCCCEEEEEE-CCEECc--------CCCcEEEEEc-CCEEEEEEecCCcccCEEEEEEEEECCceEEEE
Confidence 468889999899999999999 554432 2233332221 23458999999999999999999765 344566
Q ss_pred EEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceE----EeceEEEEcchhhhHh
Q psy16425 82 GYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQE----DFPFFKRTKKKKKKKK 156 (163)
Q Consensus 82 ~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~----~~~~l~i~~v~~~~~~ 156 (163)
+.|.|..+|.+..... ....+.+|+.+.|.|.+.+.|.|.+.|++++..+........ ....|.|.+++.+|.+
T Consensus 91 ~~l~V~~~p~~~~~~~-~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 168 (284)
T 2rik_A 91 AQLGVQEPPRFIKKLE-PSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSG 168 (284)
T ss_dssp EEEEEECCCEEEECCC-SEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCSSSEEEEEETTEEEEEECSCCGGGCE
T ss_pred EEEEccCCCcccccCC-CceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEECCCCcccCE
Confidence 7788888887665433 356688999999999999999999999999988765544332 3467999999998875
No 15
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.82 E-value=1.5e-18 Score=114.22 Aligned_cols=137 Identities=16% Similarity=0.248 Sum_probs=101.6
Q ss_pred ceeEEEeeeeccCC--CEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCceE
Q psy16425 3 ARMLIEIGEMLMAE--STVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKSQ 80 (163)
Q Consensus 3 ~~~~~~~~~~~~~~--~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~ 80 (163)
..+.|.|...+.|. +.+.|++ ++..+. ..... ..+..|.|.+++.+|+|.|+|.+.+.+....
T Consensus 19 ~~v~l~C~~~~~~~~~~~v~W~~-~~~~~~--------~~~~~------~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~ 83 (190)
T 2wv3_A 19 LPVTLQCNLTSSSHTLMYSYWTK-NGVELT--------ATRKN------ASNMEYRINKPRAEDSGEYHCVYHFVSAPKA 83 (190)
T ss_dssp SCEEEEEEEEECSSCEEEEEEEE-TTEECT--------TCCBC------CSEEEEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred ceEEEEEEeccCCCCceEEEEEE-CCEECc--------ccceE------eccEEEEEecCCcccCEEEEEEEEeCCcccc
Confidence 46888898887776 8999999 554431 11111 1235899999999999999999977655566
Q ss_pred eEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEE--CCeEEEec---CCceE----EeceEEEEcch
Q psy16425 81 VGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRR--EGGELIAQ---GNGQE----DFPFFKRTKKK 151 (163)
Q Consensus 81 ~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~--~~~~~~~~---~~~~~----~~~~l~i~~v~ 151 (163)
.+.|.|..+|.+...+ ....+.+|+.+.|.|.+.|+|.|.+.|++ ++..+... .+... ..+.|.|.+++
T Consensus 84 ~~~l~V~~~p~~~~~~--~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~L~i~~~~ 161 (190)
T 2wv3_A 84 NATIEVKAAPDITGHK--RSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTELNIVNLQ 161 (190)
T ss_dssp EEEEEEECCCEEEEEC--SEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEEECSSEEEEEECSCC
T ss_pred cEEEEEecCCcccccC--CcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEecCCCeeEEEEEecc
Confidence 6788888888877644 35678899999999999999999999999 66665422 22222 11379999999
Q ss_pred -hhhHh
Q psy16425 152 -KKKKK 156 (163)
Q Consensus 152 -~~~~~ 156 (163)
.+|.+
T Consensus 162 ~~~d~G 167 (190)
T 2wv3_A 162 ITEDPG 167 (190)
T ss_dssp TTTSCE
T ss_pred ccCCCE
Confidence 68865
No 16
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.81 E-value=8.6e-19 Score=115.45 Aligned_cols=144 Identities=22% Similarity=0.291 Sum_probs=102.1
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.|.|...+.|.+.+.|++ ++..+... ...++..... .+..+|.|.+++.+|+|.|+|.+.+. +.....
T Consensus 21 ~~v~l~C~~~~~p~~~v~W~~-~~~~~~~~------~~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~ 92 (194)
T 2a38_A 21 STATFEAHISGFPVPEVSWFR-DGQVISTS------TLPGVQISFS-DGRAKLTIPAVTKANSGRYSLKATNGSGQATST 92 (194)
T ss_dssp SCEEEEEEEEEESCCEEEEEE-SSSBCCTT------TSTTCEEEEE-TTEEEEEESSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CEEEEEEEEEecCCCEEEEEE-CCEEcccc------cCCceEEEeC-CCEEEEEECCCCcccCEEEEEEEEcCCceEeEE
Confidence 468889999889999999999 55443211 1112222221 23458999999999999999999765 333444
Q ss_pred EEEEEEc---CCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceE--Ee--ceEEEEcchhhh
Q psy16425 82 GYLEVVV---PPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQE--DF--PFFKRTKKKKKK 154 (163)
Q Consensus 82 ~~l~v~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~--~~--~~l~i~~v~~~~ 154 (163)
..+.|.. +|.+...+ ....+.+|+.+.|.|.+.+.|.|.+.|++++..+........ ++ ..|.|.+++.+|
T Consensus 93 ~~l~v~~~~~~p~~~~~~--~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 170 (194)
T 2a38_A 93 AELLVKAETAPPNFVQRL--QSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQISQEGDLYSLLIAEAYPED 170 (194)
T ss_dssp EEEEEECCCEEEEEEECC--CCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEEETTEEEEEEEEECGGG
T ss_pred EEEEEccCCCCCEEEeCC--ccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCCCCcEEEEEcCCEEEEEECCCChhc
Confidence 5666663 34444333 356788999999999999999999999999998765544332 22 279999999988
Q ss_pred Hh
Q psy16425 155 KK 156 (163)
Q Consensus 155 ~~ 156 (163)
.+
T Consensus 171 ~G 172 (194)
T 2a38_A 171 SG 172 (194)
T ss_dssp CE
T ss_pred Ce
Confidence 75
No 17
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.81 E-value=1.5e-18 Score=131.81 Aligned_cols=142 Identities=19% Similarity=0.290 Sum_probs=108.5
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.+.|...+.|.+.|.|++ ++..+. ...++...... ....|.|.+++.+|+|.|+|.+.|. +.....
T Consensus 307 ~~~~l~C~~~g~P~p~v~W~k-~~~~l~--------~~~~~~~~~~~-~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~ 376 (570)
T 3b43_A 307 EHTRYECKIGGSPEIKVLWYK-DETEIQ--------ESSKFRMSFVE-SVAVLEMYNLSVEDSGDYTCEAHNAAGSASSS 376 (570)
T ss_dssp CEEEEEEEEESSSSCEEEEEE-TTEECC--------CSSSEEEEEET-TEEEEEEESCCGGGCEEEEEEEEBTTBCCEEE
T ss_pred CcEEEEEEEeeCCCCEEEEeE-CCEECC--------CCCcEEEEEEC-CEEEEEECCCCcccCEEEEEEEEeCCCEEEEE
Confidence 357889999999999999999 555442 22333322221 2347999999999999999999776 555667
Q ss_pred EEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceE--Ee--ceEEEEcchhhhHh
Q psy16425 82 GYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQE--DF--PFFKRTKKKKKKKK 156 (163)
Q Consensus 82 ~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~--~~--~~l~i~~v~~~~~~ 156 (163)
+.|.|..+|.+...+ ....+.+|+++.|.|.+.|.|.|.+.|++++..+........ ++ ..|.|.+|+.+|.+
T Consensus 377 ~~l~V~~~P~~~~~~--~~~~~~~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G 453 (570)
T 3b43_A 377 TSLKVKEPPVFRKKP--HPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIG 453 (570)
T ss_dssp EEECEECCCEECSCC--CCEEECTTCCEEEEEEEESSSSCCCEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCE
T ss_pred EEEEecCCCeeecCC--CceeecCCCEEEEEEEEecCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhhCE
Confidence 788899888776654 356778999999999999999999999999988765544332 21 47899999999875
No 18
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.80 E-value=1.8e-18 Score=125.14 Aligned_cols=148 Identities=20% Similarity=0.285 Sum_probs=109.7
Q ss_pred ceeEEEeeeeccCCCEEEEEEcC-CceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVD-TQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQ 80 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~ 80 (163)
.++.|.|...+.|.+.|.|++.+ +..+... .....+|+.+... .++.+|.|.+++.+|+|.|+|.+.|. +....
T Consensus 16 ~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~---~~~~~~~~~~~~~-~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~ 91 (389)
T 2jll_A 16 GQVTLVCDAEGEPIPEITWKRAVDGFTFTEG---DKSLDGRIEVKGQ-HGSSSLHIKDVKLSDSGRYDCEAASRIGGHQK 91 (389)
T ss_dssp SEEEEEEEEECSSCCEEEEEETTTTEEECC-----CCSSSSEEEEEC-SSEEEEEEESCCGGGCEEEEEEEECSSCEEEE
T ss_pred CeEEEEEEeecccCCeEEEEeCCCCceeccC---cCCCCCeEEEecc-CCcceEEEcccChhhCEEEEEEEEeCCCCcce
Confidence 46889999999999999999942 4443211 0112456665543 24568999999999999999999775 55566
Q ss_pred eEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCC--ceE----EeceEEEEcchhhh
Q psy16425 81 VGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGN--GQE----DFPFFKRTKKKKKK 154 (163)
Q Consensus 81 ~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~--~~~----~~~~l~i~~v~~~~ 154 (163)
.+.|.|..+|.+...+ ....+.+|+.+.|.|.+.|.|.|.+.|++++..+..... ... ....|.|.+++.+|
T Consensus 92 ~~~l~V~~~P~~~~~~--~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d 169 (389)
T 2jll_A 92 SMYLDIEYAPKFISNQ--TIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDND 169 (389)
T ss_dssp EEEEEEEEEEEECCSC--CEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCTTCTTEEEEECSSCEEEEECCCSTTS
T ss_pred EEEEEEEeCCEEecCc--ceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcccCceEEEeccCCEEEEEECCCChhh
Confidence 7788888888776533 244678999999999999999999999999988755431 111 23469999999888
Q ss_pred Hh
Q psy16425 155 KK 156 (163)
Q Consensus 155 ~~ 156 (163)
.+
T Consensus 170 ~G 171 (389)
T 2jll_A 170 FG 171 (389)
T ss_dssp SE
T ss_pred CE
Confidence 65
No 19
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.80 E-value=3.9e-18 Score=112.05 Aligned_cols=139 Identities=25% Similarity=0.421 Sum_probs=100.6
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
.++.|.|...+.|.+.+.|++ ++..+. ...++..... +.+|.|.+++.+|+|.|+|.+.+. +.....
T Consensus 20 ~~v~l~C~~~~~p~~~v~W~~-~~~~~~--------~~~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 87 (192)
T 2va4_A 20 EEMTFSCRASGSPEPAISWFR-NGKLIE--------ENEKYILKGS---NTELTVRNIINSDGGPYVCRATNKAGEDEKQ 87 (192)
T ss_dssp CCEEEECEEECSSCCEEEEEE-TTEECC--------CSSSEEEETT---TTEEEECSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CCEEEEEeeccCCCCeEEEEE-CCeEcC--------CCccEEEeCC---eeEEEEecCChhcCcEEEEEEEccccccceE
Confidence 468899999889999999999 555442 2244444332 237999999999999999999765 333455
Q ss_pred EEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEEC--CeEEEec-----CCceE----EeceEEEEcc
Q psy16425 82 GYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRRE--GGELIAQ-----GNGQE----DFPFFKRTKK 150 (163)
Q Consensus 82 ~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~--~~~~~~~-----~~~~~----~~~~l~i~~v 150 (163)
..|.|..+|.+...+ ...+.+|+.+.|.|.+.+.|.|.+.|+++ +..+... ..... ....|.|.++
T Consensus 88 ~~l~V~~~p~~~~~~---~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~ 164 (192)
T 2va4_A 88 AFLQVFVQPHIIQLK---NETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDV 164 (192)
T ss_dssp EEEEEEEEEEEEEEC---CEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEETTEEEEEEESC
T ss_pred EEEEEEccCcccccC---cceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEeeccCceEEEEecC
Confidence 667777777665533 34677899999999999999999999998 4444321 11111 1367999999
Q ss_pred hhhhHh
Q psy16425 151 KKKKKK 156 (163)
Q Consensus 151 ~~~~~~ 156 (163)
+.+|.+
T Consensus 165 ~~~d~G 170 (192)
T 2va4_A 165 KLSDSG 170 (192)
T ss_dssp CGGGCE
T ss_pred CcccCE
Confidence 998875
No 20
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.80 E-value=2.7e-18 Score=113.38 Aligned_cols=139 Identities=23% Similarity=0.333 Sum_probs=100.2
Q ss_pred ceeEEEeeee-ccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCC--c----eEEEEEcccCCCCCeEEEEEEEeC
Q psy16425 3 ARMLIEIGEM-LMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSET--K----AWYLHIREVRESDRGWYMCQVNTD 75 (163)
Q Consensus 3 ~~~~~~~~~~-~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~--~----~~~L~i~~v~~~d~G~Y~C~~~~~ 75 (163)
..+.|.|... +.|.+.|.|++ ++..+..... .++....... . ..+|.|.+++.+|+|.|+|.+.+.
T Consensus 18 ~~v~l~C~~~~~~p~~~v~W~~-~g~~l~~~~~------~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~ 90 (195)
T 2c5d_C 18 LTGTLRCQLQVQGEPPEVHWLR-DGQILELADS------TQTQVPLGEDEQDDWIVVSQLRITSLQLSDTGQYQCLVFLG 90 (195)
T ss_dssp CCEEEEEEEEEESSCCCCEEEE-TTEECCSCEE------EEEEEECSSSTTSEEEEEEEEEESSCCSTTCEEEEEEEEET
T ss_pred CcEEEecccccCCCCcEEEEEE-CCEEcccCCC------CceEEEEccccccceeeccEEEEEeccccCCcEEEEEEEeC
Confidence 4678889888 89999999999 5555432211 1222221111 1 348999999999999999999775
Q ss_pred CCc--eEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCC-eEEEEECCeEEEecCCceEEeceEEEEcch
Q psy16425 76 PMK--SQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKP-NITWRREGGELIAQGNGQEDFPFFKRTKKK 151 (163)
Q Consensus 76 ~~~--~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p-~v~W~~~~~~~~~~~~~~~~~~~l~i~~v~ 151 (163)
... +..+.|.|..+|.+...+ ....+.+|+.+.|.|.+.+.|.| .+.|++++..+...... ..++.|.|.+++
T Consensus 91 ~~~~~~~~~~l~V~~~p~~~~~~--~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~-~~~~~L~i~~~~ 166 (195)
T 2c5d_C 91 HQTFVSQPGYVGLEGLPYFLEEP--EDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGH-GPQRSLHVPGLN 166 (195)
T ss_dssp TEEEECCCEEEEECCSCEEEECC--CCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSSTTS-SCCEEEEECCCS
T ss_pred CCceecccEEEEEecCCeEEcCC--CcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCCCc-CCCCeEEEcccc
Confidence 322 234678888888776644 35678899999999999999999 99999999877544332 345678888776
No 21
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.80 E-value=2.7e-19 Score=134.87 Aligned_cols=146 Identities=14% Similarity=0.213 Sum_probs=104.7
Q ss_pred ceeEEEeeee-ccCCCEEEEEEcCCceEEeeee---eEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCc
Q psy16425 3 ARMLIEIGEM-LMAESTVAWLRVDTQTILTIQT---HVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMK 78 (163)
Q Consensus 3 ~~~~~~~~~~-~~~~~~i~W~k~~~~~~~~~~~---~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~ 78 (163)
..+.|.|... +.|.+.|.|++ ++..+..... ..+.. .+... ...+|.|.+++.+|+|.|+|.+.|. .
T Consensus 243 ~~v~L~C~~~~g~p~p~i~W~k-~g~~l~~~~~~~~~~~~~-~~~~~-----~~~~L~I~~v~~~DsG~Y~C~a~N~--~ 313 (527)
T 3qs9_E 243 EPLWIRCKAVHVNHGFGLTWEL-ENKALEEGNYFEMSTYST-NRTMI-----RILFAFVSSVARNDTGYYTCSSSKH--P 313 (527)
T ss_dssp SCEEEEEEEEESSSCCCEEEEC-SSSCCCGGGEEEEEEEET-TTEEE-----EEEEEEESSCCGGGCEEEEEEETTE--E
T ss_pred CeEEEEEEEccCCCCeEEEEEE-CCEECCCCceeeeeeecc-Cccee-----eEEEEEEccCCcccCeEEEEEEEeC--C
Confidence 3678889886 89999999999 4444321100 00011 11111 1237999999999999999999665 5
Q ss_pred eEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceEEeceEEEEcchhhhHhh
Q psy16425 79 SQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQEDFPFFKRTKKKKKKKKK 157 (163)
Q Consensus 79 ~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~ 157 (163)
...+.|.|..+|.+...+......+.+|+.+.|.|.+.|+|.|.+.|++++..+.........+..|.|.+++.+|++.
T Consensus 314 ~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L~I~~v~~~D~G~ 392 (527)
T 3qs9_E 314 SQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLDNGYSISKFCNHKHQPGE 392 (527)
T ss_dssp EEEEEEEEC--CEEECCCSCCEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBCSSSSEEEEECCCTTCCSC
T ss_pred CceEEEEEEccCccccccCcccEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCcccccCCcEEEEecCCcccCEE
Confidence 6667788887776655443334667889999999999999999999999999986665444456789999999998763
No 22
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.80 E-value=1e-18 Score=121.81 Aligned_cols=145 Identities=17% Similarity=0.314 Sum_probs=106.7
Q ss_pred ceeEEEeeeeccC-CCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCc--e
Q psy16425 3 ARMLIEIGEMLMA-ESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMK--S 79 (163)
Q Consensus 3 ~~~~~~~~~~~~~-~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~--~ 79 (163)
..+.|.|...+.+ .+.|.|++.++..+. ....++..........+|.|.+++.+|+|.|+|.+.+.... .
T Consensus 18 ~~v~l~C~~~~~~~~~~i~W~~~~g~~~~-------~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~ 90 (291)
T 1qz1_A 18 ESKFFLCQVAGDAKDKDISWFSPNGEKLS-------PNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSE 90 (291)
T ss_dssp CCEEEEEEESSCCSCCEEEEECTTSCBCC-------SSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEE
T ss_pred CeEEEEEEeCCCCCCcEeEEECCCCeECc-------cCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEEEcCCCCeeE
Confidence 4688889888876 699999995554432 12345555544445568999999999999999999776432 3
Q ss_pred EeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCce---EEeceEEEEcchhhhHh
Q psy16425 80 QVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQ---EDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 80 ~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~---~~~~~l~i~~v~~~~~~ 156 (163)
..+.|.+..+|.+...+ ....+.+|+.+.|.|.+.+.|.|.+.|++++..+....... ..++.|.|.+++.+|.+
T Consensus 91 ~~~~l~v~~~~~~~~~~--~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 168 (291)
T 1qz1_A 91 ATVNVKIFQKLMFKNAP--TPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIKKTDEG 168 (291)
T ss_dssp EEEEEEEECCSEEEECC--SSEEEETTSCEEECCEEECSSCCEEEEEETTSCSSTTCCTTEEECTTSCEEETTCCGGGCE
T ss_pred EEEEEEeeccccccCCC--CcccccCCCeEEEEEEeccCCCCEEEEEECCEEcccCCCceEEEccCCcEEEccCccccCe
Confidence 45566777777666544 35678899999999999999999999999998764332221 24567999999988875
No 23
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.79 E-value=2.3e-18 Score=112.47 Aligned_cols=134 Identities=24% Similarity=0.387 Sum_probs=98.5
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCC-CceEEEEEcccCCCCCeEEEEEEEeCCC--ce
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSE-TKAWYLHIREVRESDRGWYMCQVNTDPM--KS 79 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~~~~~~~--~~ 79 (163)
..+.|.|...+.|.+.|.|++ ++..+... .+....... ....+|.|.+++.+|+|.|+|.+.+... .+
T Consensus 18 ~~v~l~C~~~~~p~~~v~W~k-~~~~~~~~--------~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~ 88 (182)
T 1rhf_A 18 QPVKLNCSVEGMEEPDIQWVK-DGAVVQNL--------DQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGGETEIS 88 (182)
T ss_dssp CCEEEEEEEESCSSCCEEEEE-TTEECCSS--------EEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESSCTTCEEC
T ss_pred CcEEEEEEEeCCCCCeEEEEE-CCeecCCC--------CceEEEecCCCceEEEEEeecCcccCeEEEEEEEcCCCcEEE
Confidence 468889998889999999999 55444221 122222111 1235899999999999999999976532 34
Q ss_pred EeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCC-eEEEEECCeEEEecCCceEEeceEEEEcc
Q psy16425 80 QVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKP-NITWRREGGELIAQGNGQEDFPFFKRTKK 150 (163)
Q Consensus 80 ~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p-~v~W~~~~~~~~~~~~~~~~~~~l~i~~v 150 (163)
..+.|.|..+|.+...+ ....+.+|+.+.|.|.+.+.|.| .+.|++++..+... ......|.|.++
T Consensus 89 ~~~~l~V~~~p~~~~~~--~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~---~~~~~~L~i~~~ 155 (182)
T 1rhf_A 89 QPVWLTVEGVPFFTVEP--KDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGP---APSPSVLNVTGV 155 (182)
T ss_dssp CCEEEEEECSCEEEECC--CCEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCS---EESSEEEEECCC
T ss_pred EEEEEEEecCCeEEecC--cceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCC---CCCceEEEEecc
Confidence 56788898888877654 35678899999999999999999 99999999876332 124566777777
No 24
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.79 E-value=1.1e-18 Score=126.69 Aligned_cols=139 Identities=21% Similarity=0.348 Sum_probs=105.6
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.|.|...+.|.+.+.|++ ++..+. .... ..... +..|.|.+++.+|+|.|+|.+.+. +.....
T Consensus 238 ~~v~l~C~~~g~p~~~v~W~~-~~~~~~--------~~~~-~~~~~---~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 304 (404)
T 3p3y_A 238 MDLLLECIASGVPTPDIAWYK-KGGDLP--------SDKA-KFENF---NKALRITNVSEEDSGEYFCLASNKMGSIRHT 304 (404)
T ss_dssp SCEEEECCBCCSSCCEEEEEE-TTBCCC--------TTTE-EEEGG---GTEEEESSCCGGGCEEEEEEEECSSCEEEEE
T ss_pred CCEEEEEEECCCCCCcEEEEE-CCEECC--------CCcc-ccccc---CceEEEccCCHhHCEEEEEEEEeCCCcEEEE
Confidence 357888999999999999999 554431 1111 11111 128999999999999999999776 445566
Q ss_pred EEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecC---CceEEeceEEEEcchhhhHh
Q psy16425 82 GYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQG---NGQEDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 82 ~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~---~~~~~~~~l~i~~v~~~~~~ 156 (163)
+.|.|..+|.+...+ ....+.+|+.+.|.|.+.|+|.|.+.|++++..+.... .....++.|.|.+++.+|++
T Consensus 305 ~~l~V~~~p~~~~~~--~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G 380 (404)
T 3p3y_A 305 ISVRVKAAPYWLDEP--KNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRA 380 (404)
T ss_dssp EEEEEEEEEEEEECC--CCEEECTTCCEEEECEEEEESCCEEEEEETTEEGGGSCCCTTEEEETTEEEESSCCSSCCC
T ss_pred EEEEEeCCCeeeccC--CcceeecCCcEEEEEEccccCCCceEEEECCEecCCCCCCceEEecCCEEEEeecCHHHCE
Confidence 778888887766644 35678899999999999999999999999999875443 22246678999999998875
No 25
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.79 E-value=4.7e-19 Score=121.06 Aligned_cols=152 Identities=17% Similarity=0.236 Sum_probs=101.8
Q ss_pred ceeEEEeeeec---cCCCEEEEEEcCCce--E-Eeeee------------------eEEecCCeEEEEeCCCceEEEEEc
Q psy16425 3 ARMLIEIGEML---MAESTVAWLRVDTQT--I-LTIQT------------------HVITKNHRIGVTHSETKAWYLHIR 58 (163)
Q Consensus 3 ~~~~~~~~~~~---~~~~~i~W~k~~~~~--~-~~~~~------------------~~~~~~~r~~~~~~~~~~~~L~i~ 58 (163)
.++.|.|...+ .+.+.|.|++.+... . ...+. ......+|+.+... ++.+|.|.
T Consensus 18 ~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~--~~~~L~I~ 95 (250)
T 2fbo_J 18 GTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVANL--AAPTLRLT 95 (250)
T ss_dssp SCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSCT--TSCCEEEC
T ss_pred CeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEeccC--CcceEEEe
Confidence 46888898876 888999999954321 1 11100 00123455554442 34589999
Q ss_pred ccCCCCCeEEEEEEEeCCCc------eEeEEEEEEcC--CcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCe
Q psy16425 59 EVRESDRGWYMCQVNTDPMK------SQVGYLEVVVP--PDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGG 130 (163)
Q Consensus 59 ~v~~~d~G~Y~C~~~~~~~~------~~~~~l~v~~~--p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~ 130 (163)
+++.+|+|.|+|.+.+.... ...+.|.|..+ |............+.+|+++.|.|.+.+.|.|.+.|++++.
T Consensus 96 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p~v~W~k~~~ 175 (250)
T 2fbo_J 96 HVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANANVTWYTGPT 175 (250)
T ss_dssp SCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESCTTCEEEEEEEEE
T ss_pred eCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCCCCCeeEEEeCCC
Confidence 99999999999999765322 23566777664 22222222235667789999999999999999999999987
Q ss_pred EEEecC----------------------CceE---EeceEEEEcchhhhHh
Q psy16425 131 ELIAQG----------------------NGQE---DFPFFKRTKKKKKKKK 156 (163)
Q Consensus 131 ~~~~~~----------------------~~~~---~~~~l~i~~v~~~~~~ 156 (163)
.+.... .... ....|.|.+++.+|.+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G 226 (250)
T 2fbo_J 176 FFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAG 226 (250)
T ss_dssp CSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCE
T ss_pred cccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCE
Confidence 653311 0111 2378999999999976
No 26
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.79 E-value=2.2e-18 Score=114.75 Aligned_cols=148 Identities=16% Similarity=0.185 Sum_probs=100.4
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCC----ceEEeee------eeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDT----QTILTIQ------THVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQV 72 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~----~~~~~~~------~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~ 72 (163)
.++.|.|...+.+.+.|.||+.+. ..+.... .......+|+.+..++ +|.|.+++.+|+|.|+|.+
T Consensus 15 ~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~----~L~i~~v~~~D~G~Y~C~~ 90 (208)
T 3r4d_A 15 NNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNG----SLLFQMITMKDMGVYTLDM 90 (208)
T ss_dssp CCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTS----CEEECSCCGGGCEEEEEEE
T ss_pred CcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCC----eEEEccccccCCeEEEEEE
Confidence 468899998888999999998432 1111110 0001124566555443 7999999999999999999
Q ss_pred EeCC--CceEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceE--EeceEEEE
Q psy16425 73 NTDP--MKSQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQE--DFPFFKRT 148 (163)
Q Consensus 73 ~~~~--~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~--~~~~l~i~ 148 (163)
.+.. .......|.|..++........... +.+|+.+.|.|.+.+.| |.+.|++++..+........ .+..|.|.
T Consensus 91 ~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~-~~~g~~v~l~C~~~~~p-p~i~W~~~g~~l~~~~~~~~~~~~~~L~i~ 168 (208)
T 3r4d_A 91 TDENYRRTQATVRFHVHQPVTQPFLQVTNTT-VKELDSVTLTCLSNDIG-ANIQWLFNSQSLQLTERMTLSQNNSILRID 168 (208)
T ss_dssp ECSSCEEEEEEEEEEEECCCCCCEEEESCSS-CCTTCCEEEEEECSCTT-CEEEEEETTEECCCCSSEEEETTTTEEEES
T ss_pred EcccCceeEEEEEEEeccCCCCCEEecCCce-EeeCCCEEEEEECCCCC-CceEEEECCEeCCCCCCeEEcCCCCEEEEe
Confidence 7663 2334455667655322111111122 78899999999999866 89999999988765544443 33789999
Q ss_pred cchhhhHh
Q psy16425 149 KKKKKKKK 156 (163)
Q Consensus 149 ~v~~~~~~ 156 (163)
+++.+|.+
T Consensus 169 ~v~~~d~G 176 (208)
T 3r4d_A 169 PIKREDAG 176 (208)
T ss_dssp SCCGGGCE
T ss_pred ccCHHhCe
Confidence 99999875
No 27
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.79 E-value=2.7e-18 Score=130.40 Aligned_cols=143 Identities=16% Similarity=0.274 Sum_probs=107.1
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.|.|...+.|.+.|.|++ ++..+ ....++...... ....|.|.+++.+|+|.|+|.+.|. +..+..
T Consensus 213 ~~~~l~C~~~g~p~p~i~W~k-~g~~i--------~~~~~~~~~~~~-~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~ 282 (570)
T 3b43_A 213 ESGTFKCHVTGTAPIKITWAK-DNREI--------RPGGNYKMTLVE-NTATLTVLKVTKGDAGQYTCYASNVAGKDSCS 282 (570)
T ss_dssp SCEEEEEEEESSSCCEEEEEE-TTEEC--------CTTSSEEEEEET-TEEEEEESSBCGGGCEEEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEEECCCCEEEEEE-CCEEC--------cCCCcEEEEEEC-CEEEEEEcccCcccCEEEEEEEECCCCcEEEE
Confidence 367889999999999999999 55544 222333322211 2348999999999999999999776 444556
Q ss_pred EEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceE----EeceEEEEcchhhhHh
Q psy16425 82 GYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQE----DFPFFKRTKKKKKKKK 156 (163)
Q Consensus 82 ~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~----~~~~l~i~~v~~~~~~ 156 (163)
+.|.|..+|.+..... ....+.+|+.+.|.|.+.|.|.|.+.|++++..+........ ....|.|.+++.+|.+
T Consensus 283 ~~l~V~~~p~~~~~~~-~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G 360 (570)
T 3b43_A 283 AQLGVQEPPRFIKKLE-PSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSG 360 (570)
T ss_dssp EEECCBCCCEEEECCC-SBCCEESSCEEEEEEEEESSSSCEEEEEETTEECCCSSSEEEEEETTEEEEEEESCCGGGCE
T ss_pred EEEEeecCCcccccCC-CccEEcCCCcEEEEEEEeeCCCCEEEEeECCEECCCCCcEEEEEECCEEEEEECCCCcccCE
Confidence 7788888887655332 234577899999999999999999999999998765544332 3367999999999876
No 28
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.79 E-value=1.7e-18 Score=115.36 Aligned_cols=147 Identities=18% Similarity=0.225 Sum_probs=104.4
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEe-ee--eeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCC---
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILT-IQ--THVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDP--- 76 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~-~~--~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~--- 76 (163)
..+.|.|...+.|.+.|.|++.+...... .. ........|+.... .+|.|.+++.+|+|.|+|.+.+..
T Consensus 17 ~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-----~~L~i~~v~~~D~G~Y~C~~~~~~g~~ 91 (212)
T 1f97_A 17 ESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSS-----SGITFSSVTRKDNGEYTCMVSEEGGQN 91 (212)
T ss_dssp CCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEET-----TEEEESCCCGGGCEEEEEEEEETTSSS
T ss_pred CCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeec-----eeEEEcccCcccCeEEEEEEEccCCCc
Confidence 46888999988899999999954432110 00 01112345666554 289999999999999999997752
Q ss_pred CceEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeE-eccCCCCeEEEEECCe-EEEecCCc---------e--EEec
Q psy16425 77 MKSQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCA-ASGSPKPNITWRREGG-ELIAQGNG---------Q--EDFP 143 (163)
Q Consensus 77 ~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~-~~~~p~p~v~W~~~~~-~~~~~~~~---------~--~~~~ 143 (163)
.....+.|.|..+|.+...+. ...+.+|+.+.|.|. +.+.|.|.+.|++++. .+...... . ...+
T Consensus 92 ~~~~~~~l~V~~~p~~~~~~~--~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 169 (212)
T 1f97_A 92 YGEVSIHLTVLVPPSKPTISV--PSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSG 169 (212)
T ss_dssp EEEEEEEEEEEBCCCCCEEEC--CSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBSCSSSCEEECTTTC
T ss_pred ccEEEEEEEEEcCCCCcccCC--ccccCCCCeEEEEEEcccCcCCCEEEEEeCCcccccccccccccccCceeEecCCCc
Confidence 234566788888887665443 346788999999999 6899999999999998 65443221 1 1356
Q ss_pred eEEEEcchhhhHh
Q psy16425 144 FFKRTKKKKKKKK 156 (163)
Q Consensus 144 ~l~i~~v~~~~~~ 156 (163)
.|.|.+++.+|.+
T Consensus 170 ~L~i~~~~~~d~G 182 (212)
T 1f97_A 170 DLIFDPVTAFDSG 182 (212)
T ss_dssp CEEESSCCGGGCE
T ss_pred eEEEEecChhhCc
Confidence 8999999998875
No 29
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.79 E-value=6e-19 Score=117.63 Aligned_cols=152 Identities=17% Similarity=0.237 Sum_probs=104.9
Q ss_pred ceeEEEeeeeccC----CCEEEEEEcCC-------ceEEeeeeeEEe-----cCCeEEEEeC--CCceEEEEEcccCCCC
Q psy16425 3 ARMLIEIGEMLMA----ESTVAWLRVDT-------QTILTIQTHVIT-----KNHRIGVTHS--ETKAWYLHIREVRESD 64 (163)
Q Consensus 3 ~~~~~~~~~~~~~----~~~i~W~k~~~-------~~~~~~~~~~~~-----~~~r~~~~~~--~~~~~~L~i~~v~~~d 64 (163)
.++.|.|...+.+ .+.|.|++.+. ..+...++.... ..+|+.+... ..++.+|.|.+++.+|
T Consensus 16 ~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D 95 (214)
T 3jz7_A 16 ETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASINVTNLQLSD 95 (214)
T ss_dssp SCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCEEECSCCGGG
T ss_pred CCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccEEEccCChhh
Confidence 4688889887776 57999998432 112222222222 2567766542 1245689999999999
Q ss_pred CeEEEEEEEeC-CCceEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEe-ccCCCCeEEEEECCe--EEEecCCceE
Q psy16425 65 RGWYMCQVNTD-PMKSQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAA-SGSPKPNITWRREGG--ELIAQGNGQE 140 (163)
Q Consensus 65 ~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~p~v~W~~~~~--~~~~~~~~~~ 140 (163)
+|.|+|.+.+. +.....+.|.|..+|.+...+. ...+.+|+.+.|.|.+ .+.|.|.+.|++++. .+........
T Consensus 96 ~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~--~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~~~~~~~~~~~~~ 173 (214)
T 3jz7_A 96 IGTYQCKVKKAPGVANKKFLLTVLVKPSGTRCFV--DGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTMPTPWLAEM 173 (214)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEECCCBSCEEEE--ESCCBTTCCEEEEEECSBCCSSCEEEEEECSTTCCCCGGGGGGT
T ss_pred CeEEEEEEEeCCCccccEEEEEEEcCCCCceeee--ecceecCCcEEEEecCCCCCCCCEEEEEECCCCCccCccceecc
Confidence 99999999765 3345667788888877655332 2336789999999999 799999999999543 3322222223
Q ss_pred EeceEEEEcchhhhHh
Q psy16425 141 DFPFFKRTKKKKKKKK 156 (163)
Q Consensus 141 ~~~~l~i~~v~~~~~~ 156 (163)
.++.|.|.+++.+|.+
T Consensus 174 ~~~~L~i~~~~~~d~G 189 (214)
T 3jz7_A 174 TSPVISVKNASSEYSG 189 (214)
T ss_dssp TSSEEEECSCCGGGCE
T ss_pred CCCEEEEecCCHHHCE
Confidence 4568999999999875
No 30
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.79 E-value=1.2e-18 Score=126.54 Aligned_cols=140 Identities=24% Similarity=0.396 Sum_probs=108.2
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.|.|...+.|.+.+.|++ ++..+. ....++.....+ .|.|.+++.+|+|.|+|.+.+. +.....
T Consensus 237 ~~~~l~C~~~~~p~~~~~W~~-~~~~~~-------~~~~~~~~~~~~----~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 304 (403)
T 3laf_A 237 KDAVLECCVSGYPPPSFTWLR-GEEVIQ-------LRSKKYSLLGGS----NLLISNVTDDDSGTYTCVVTYKNENISAS 304 (403)
T ss_dssp SCEEECCEEEEESCCEEEEEE-TTEECC-------CSSSSEEEETTT----EEEECSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CcEEEEEEcCCCCCCeEEEEE-CCeecc-------CCCceEEECCcc----EEEEeCCCHHHCEEEEEEEEcCCCceEEE
Confidence 357888999999999999999 554432 122334444333 8999999999999999999776 445566
Q ss_pred EEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceE-EeceEEEEcchhhhHh
Q psy16425 82 GYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQE-DFPFFKRTKKKKKKKK 156 (163)
Q Consensus 82 ~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~-~~~~l~i~~v~~~~~~ 156 (163)
+.|.|..+|.+...+ ....+.+|+.+.|.|.+.|.|.|.+.|++++..+........ .++.|.|.+++.+|.+
T Consensus 305 ~~l~V~~~p~~~~~~--~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~L~i~~v~~~d~G 378 (403)
T 3laf_A 305 AELTVLVPPWFLNHP--SNLYAYESMDIEFECAVSGKPVPTVNWMKNGDVVIPSDYFQIVGGSNLRILGVVKSDEG 378 (403)
T ss_dssp EEEEEEEEEEEEECC--CCEECCTTCCEEECCEEEEESCCEEEEEETTEECCCSSSEEEETTTEEEESSCCGGGCE
T ss_pred EEEEEECCCcEeecC--cceEEecCCeEEEEEEEeeccCCEEEEEECCEECCCCCcEEEecCccEEEeccccccCE
Confidence 778888888776644 356688999999999999999999999999998765554443 4578999999999875
No 31
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.79 E-value=5.5e-18 Score=110.70 Aligned_cols=135 Identities=14% Similarity=0.164 Sum_probs=89.7
Q ss_pred ceeEEEeeeec--cCCCEEEEEEcCCceEEeee--eeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCC-C
Q psy16425 3 ARMLIEIGEML--MAESTVAWLRVDTQTILTIQ--THVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDP-M 77 (163)
Q Consensus 3 ~~~~~~~~~~~--~~~~~i~W~k~~~~~~~~~~--~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~-~ 77 (163)
.++.|.|...+ .+.+.|.|++ ++..+.... ...+...+|+.+...+ +|.|.+++.+|+|.|+|.+.+.. .
T Consensus 12 ~~v~L~c~~~~~~~~~~~i~W~k-~~~~i~~~~~~~~~~~~~~r~~~~~~g----sL~I~~v~~~D~G~Y~C~~~n~~g~ 86 (176)
T 1hng_A 12 HGINLNIPNFQMTDDIDEVRWER-GSTLVAEFKRKMKPFLKSGAFEILANG----DLKIKNLTRDDSGTYNVTVYSTNGT 86 (176)
T ss_dssp SCEEECCTTCCCCTTEEEEEEEE-TTEEEEEEETTSCCEESSTTEEECTTS----CEEESSCCGGGCEEEEEEEEETTCC
T ss_pred CcEEEcCCCCCcccccccEEEEe-CCceeEEEcCCCeecCCCCeEEECCCC----cEEEcccccccCEEEEEEEEeCCCC
Confidence 46788885544 6678999999 554443211 1122345677775444 69999999999999999997763 3
Q ss_pred c--eEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceEEeceEEEEcchhhhH
Q psy16425 78 K--SQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQEDFPFFKRTKKKKKKK 155 (163)
Q Consensus 78 ~--~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~l~i~~v~~~~~ 155 (163)
. ...+.|.|..++.. +. ....+..+.|.|.+.+.|.|.+.|++++..+..... +.|..++.+|.
T Consensus 87 ~~~~~~~~l~V~~~~~~------p~-i~~~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~~~-------~~i~~~~~~d~ 152 (176)
T 1hng_A 87 RILNKALDLRILEMVSK------PM-IYWECSNATLTCEVLEGTDVELKLYQGKEHLRSLRQ-------KTMSYQWTNLR 152 (176)
T ss_dssp EEEEEEEEEEEECCCCC------CE-EEEETTTTEEEEECSSCSSCEEEEEETTEEEEEESS-------SEEEEECSCCS
T ss_pred EEEEEEEEEEEeCCCCC------CE-EEecCCcEEEEEEecCCCCcEEEEEECCEECCCCCc-------EEEEEEEccCC
Confidence 2 44456666654321 11 122355699999999999999999999988765543 34445555554
Q ss_pred h
Q psy16425 156 K 156 (163)
Q Consensus 156 ~ 156 (163)
+
T Consensus 153 G 153 (176)
T 1hng_A 153 A 153 (176)
T ss_dssp S
T ss_pred e
Confidence 3
No 32
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.78 E-value=1.6e-18 Score=115.99 Aligned_cols=151 Identities=19% Similarity=0.212 Sum_probs=99.5
Q ss_pred ceeEEEeeeeccCCCEEEEEEcC-CceE--Eee--eeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCC
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVD-TQTI--LTI--QTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPM 77 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~-~~~~--~~~--~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~ 77 (163)
.++.|.|...+.|.+.|.||+.+ +... ... ........+|+.... ..++++|.|.+++.+|+|.|+|.+.+...
T Consensus 17 ~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 95 (213)
T 3nl4_L 17 GTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSG-SGTDFTLTISDLECADAATYYCQSTYENP 95 (213)
T ss_dssp CCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ETTEEEEEECSCCGGGCEEEEEEECCSST
T ss_pred CCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEec-CCCEEEEEECCCChHHCEEEEEecCCCCc
Confidence 46899999999899999999953 2111 110 001111245676663 23567899999999999999999966532
Q ss_pred ----ceEeEEEEEEc---CCcccccCCCCcEEEeCCCcEEEEeEecc-CCCCeEEEEECCeEEEecC-----------Cc
Q psy16425 78 ----KSQVGYLEVVV---PPDILDYPTSTDMVIREGSNVTLKCAASG-SPKPNITWRREGGELIAQG-----------NG 138 (163)
Q Consensus 78 ----~~~~~~l~v~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p~v~W~~~~~~~~~~~-----------~~ 138 (163)
......+.|.. +|.+...+. ...+.+|+.+.|.|.+.+ .|.|.+.|++++..+.... ..
T Consensus 96 ~~~~~~~~~~l~V~~~~~~p~v~~~~~--~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~ 173 (213)
T 3nl4_L 96 TYVSFGGGTEVGVKGDPVAPTVLIFPP--SADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQTTGIENSKTPQNSADCT 173 (213)
T ss_dssp TTCEECCCEEEEEECCCBCCEEEEECC--CHHHHTTSEEEEEEEEEEEBSCCEEEEEETTEECCSSEEEEECCCCTTTCC
T ss_pred eeEEeCCCeEEEEeCCCcCCeEEEeCC--chhhccCCcEeEEEEEecccCCcEEEEEeCCccCCCCeecccCcccCCCCe
Confidence 23344566643 333333221 223456999999999998 8999999999998774311 11
Q ss_pred eEEeceEEEEcchhhhHh
Q psy16425 139 QEDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 139 ~~~~~~l~i~~v~~~~~~ 156 (163)
....+.|.|..+..+|.+
T Consensus 174 ~~~~s~L~i~~~~~~d~g 191 (213)
T 3nl4_L 174 YNLSSTLTLTSTEYNSHK 191 (213)
T ss_dssp EEEEEEEEEEHHHHHTCC
T ss_pred EEEEEEEEecHHHcCCCC
Confidence 123356889998888764
No 33
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.78 E-value=2.3e-18 Score=124.48 Aligned_cols=136 Identities=24% Similarity=0.346 Sum_probs=106.6
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.|.|...+.|.+.|.|++.++. +.. ++ ......|.|.+++.+|+|.|+|.+.+. +.....
T Consensus 223 ~~v~l~C~~~g~p~~~i~W~~~~~~-~~~----------~~-----~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 286 (382)
T 1cs6_A 223 QMVTLECFAFGNPVPQIKWRKLDGS-QTS----------KW-----LSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQ 286 (382)
T ss_dssp CCEEEECEEEEESCCEEEEEECCSC-CSC----------CC-----SBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEccCCCCEEEEEECCcc-ccc----------EE-----ecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEE
Confidence 3578889988999999999995433 210 00 012238999999999999999999776 344556
Q ss_pred EEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceEEeceEEEEcchhhhHh
Q psy16425 82 GYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQEDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 82 ~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~l~i~~v~~~~~~ 156 (163)
+.|.|..+|.+...+ ....+.+|+.+.|.|.+.|.|.|.+.|++++..+....+....++.|.|.+++.+|.+
T Consensus 287 ~~l~V~~~p~~~~~~--~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~L~i~~v~~~d~G 359 (382)
T 1cs6_A 287 GRIIIHAQPDWLDVI--TDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIEVSGGELRFSKLVLEDSG 359 (382)
T ss_dssp EEEEEEEEEEEEECC--CCEEEETTCCEEEECEEEEESCCEEEEEETTEECCCCSSEEEETTEEEESSCCGGGCE
T ss_pred EEEEEecCCCcccCC--CccEEcCCCeEEEEEEeeeecCCEEEEEECCEECCCCceEEEECCEEEECcCCcccCE
Confidence 678888777776644 3567889999999999999999999999999988766666667789999999999876
No 34
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.78 E-value=5.9e-18 Score=118.96 Aligned_cols=142 Identities=19% Similarity=0.246 Sum_probs=100.0
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCC-ceEEEEEcccCC-CCCeEEEEEEEeC-CCce
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSET-KAWYLHIREVRE-SDRGWYMCQVNTD-PMKS 79 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~L~i~~v~~-~d~G~Y~C~~~~~-~~~~ 79 (163)
..+.|.|...+.|.+.|.|++ ++..+. ..++....... ....|.|.+++. +|+|.|+|.+.+. +...
T Consensus 22 ~~v~l~C~~~g~p~~~i~W~k-~g~~i~---------~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~ 91 (304)
T 2yd9_A 22 GVASFVCQATGDPKPRVTWNK-KGKKVN---------SQRFETIEFDESAGAVLRIQPLRTPRDENVYECVAQNSVGEIT 91 (304)
T ss_dssp SCEEEEEEEECSSCCEEEEC-----------------CTTEEEEEETTTTEEEEEECSCCTTTTCSEEEEEEECSSCEEC
T ss_pred CeEEEEEEEEEeCCCeEEEEE-CCEECC---------CCceEEEEecCCCceEEEEecccccCCCeEEEEEEECCCCeEE
Confidence 468889999999999999999 454431 23333332222 235899999998 9999999999765 4445
Q ss_pred EeEEEEEEcC-------CcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCC---c-eEEeceEEEE
Q psy16425 80 QVGYLEVVVP-------PDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGN---G-QEDFPFFKRT 148 (163)
Q Consensus 80 ~~~~l~v~~~-------p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~---~-~~~~~~l~i~ 148 (163)
..+.|.|... |.+...+ ....+.+|+.+.|.|.+.+.|.|.+.|++++..+..... . ....+.|.|.
T Consensus 92 ~~~~l~V~~~~~~p~~~p~i~~~~--~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~ 169 (304)
T 2yd9_A 92 VHAKLTVLREDQLPSGFPNIDMGP--QLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLRSGALQIE 169 (304)
T ss_dssp CEEEEEEECGGGCCTTCCEEEECC--CCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEEECTTSCEEEC
T ss_pred EEEEEEEeccccCCCCCCeeecCC--ccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEEeCCCeEEEEc
Confidence 5667777765 3333333 356788999999999999999999999999988754321 1 1244689999
Q ss_pred cchhhhHh
Q psy16425 149 KKKKKKKK 156 (163)
Q Consensus 149 ~v~~~~~~ 156 (163)
+++.+|.+
T Consensus 170 ~~~~~d~G 177 (304)
T 2yd9_A 170 SSEETDQG 177 (304)
T ss_dssp SCCGGGCE
T ss_pred cCCcccCE
Confidence 99998875
No 35
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.78 E-value=1.1e-18 Score=121.73 Aligned_cols=143 Identities=22% Similarity=0.363 Sum_probs=103.5
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCC-C--ce
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDP-M--KS 79 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~-~--~~ 79 (163)
..+.|.|...+.|.+.|.|++. +..+.. ....++.....+ .|.|.+++.+|+|.|+|.+.+.. . ..
T Consensus 116 ~~v~l~C~~~~~p~~~v~W~~~-~~~~~~------~~~~~~~~~~~~----~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~ 184 (291)
T 1qz1_A 116 EDAVIVCDVVSSLPPTIIWKHK-GRDVIL------KKDVRFIVLSNN----YLQIRGIKKTDEGTYRCEGRILARGEINF 184 (291)
T ss_dssp SCEEECCEEECSSCCEEEEEET-TSCSST------TCCTTEEECTTS----CEEETTCCGGGCEEEEEEEEEGGGTEEEE
T ss_pred CeEEEEEEeccCCCCEEEEEEC-CEEccc------CCCceEEEccCC----cEEEccCccccCeEEEEEEEecCCCceee
Confidence 3578889998999999999994 443311 112344333333 79999999999999999997652 2 22
Q ss_pred EeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecC----CceE--EeceEEEEcchhh
Q psy16425 80 QVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQG----NGQE--DFPFFKRTKKKKK 153 (163)
Q Consensus 80 ~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~----~~~~--~~~~l~i~~v~~~ 153 (163)
....+.+..+|.+..........+.+|+.+.|.|.+.|.|.|.+.|++++..+.... .... .+..|.|.+++.+
T Consensus 185 ~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 264 (291)
T 1qz1_A 185 KDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKN 264 (291)
T ss_dssp EEEEEEEEEEEEEEESCSEEEEETTSCCCEEEEEEEEEESCCEEEEEETTEECCCC--CCSSEEECTTSCEEEECSCCGG
T ss_pred EEEEEEEecCCcccccccccccccccCceEEEEEEEEEeCCCcEEEEECCEECcCCCCCCcceEEcCCCcEEEEEecChh
Confidence 445667777777665443334567889999999999999999999999998875543 1111 3467999999999
Q ss_pred hHh
Q psy16425 154 KKK 156 (163)
Q Consensus 154 ~~~ 156 (163)
|.+
T Consensus 265 d~G 267 (291)
T 1qz1_A 265 DEA 267 (291)
T ss_dssp GCE
T ss_pred cCE
Confidence 875
No 36
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.78 E-value=3.5e-18 Score=123.64 Aligned_cols=138 Identities=20% Similarity=0.311 Sum_probs=103.0
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.|.|...+.|.+.|.|++.+..... ........++... .+ .|.|.+++.+|+|.|+|.+.|. +.....
T Consensus 228 ~~v~l~C~~~g~p~p~v~W~~~~~~~~~---~~~~~~~~~~~~~-~~----~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 299 (388)
T 2v5m_A 228 HTISLLCPAQGFPAPSFRWYKFIEGTTR---KQAVVLNDRVKQV-SG----TLIIKDAVVEDSGKYLCVVNNSVGGESVE 299 (388)
T ss_dssp SCEEECCCCEEESCCEEEEEEECTTSSC---EEECCCSSSEEEE-TT----EEEESSCCGGGCEEEEEEEECSSCEEEEE
T ss_pred CcEEEEEECCCCCCCEEEEEecCCCCcc---cccccccCceecc-cC----EEEECcCCHHHCeEEEEEEecCCCceeEE
Confidence 3578889988999999999995322110 0111223344332 22 8999999999999999999776 445566
Q ss_pred EEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceEEeceEEEEcchhhhHh
Q psy16425 82 GYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQEDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 82 ~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~l~i~~v~~~~~~ 156 (163)
+.|.|..+|.+...+ ....+.+|+++.|.|.+.|.|.|.+.|++++..+.. .++.|.|.+++.+|.+
T Consensus 300 ~~l~V~~~p~~~~~~--~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~i~~------~~~~L~i~~v~~~d~G 366 (388)
T 2v5m_A 300 TVLTVTAPLSAKIDP--PTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGH------SESVLRIESVKKEDKG 366 (388)
T ss_dssp EEEEEEEEEEEEEES--SEEEECTTSCEEEEEEEEEECCCEEEEEETTEECSC------CSSEEEESSCCGGGCE
T ss_pred EEEEEeCCCccccCC--CcEEecCCCCEEEEEEeccccCCeEEEEECCEECcc------CCCEEEEecCChhhCE
Confidence 778888777665544 356788999999999999999999999999988643 2467999999998875
No 37
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.78 E-value=2.1e-18 Score=124.94 Aligned_cols=145 Identities=19% Similarity=0.272 Sum_probs=107.4
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCce-E
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKS-Q 80 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~-~ 80 (163)
..+.|.|...+.|.+.|.|++ ++..+.. ....++..... .....|.|.+++.+|+|.|+|.+.+. +... .
T Consensus 228 ~~v~l~C~~~g~p~~~i~W~~-~g~~~~~------~~~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 299 (395)
T 1bih_A 228 DVTMIYCMYGSNPMGYPNYFK-NGKDVNG------NPEDRITRHNR-TSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKH 299 (395)
T ss_dssp SCEEEEEEEECSSCCCCEEEE-TTEECCC------CTTSSEESCSS-STTSEEEESSCCGGGCEEEEEEECCSSSSCEEE
T ss_pred CcEEEEEEeccCCCCeEEEEE-CCEEcCC------CCceeEEEEec-CCCceEEEccCChhhCEEEEEEEEeCCCCceEE
Confidence 357888999999999999999 5544321 11222222111 12237999999999999999999766 3323 3
Q ss_pred eEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceEEeceEEEEcchhhhHhh
Q psy16425 81 VGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQEDFPFFKRTKKKKKKKKK 157 (163)
Q Consensus 81 ~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~ 157 (163)
.+.|.|..+|.+...+.. ...+.+|+++.|.|.+.|.|.|.+.|++++..+... +....++.|+|.+++.+|.+.
T Consensus 300 ~~~l~V~~~P~~~~~~~~-~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~-~~~~~~~~L~i~~~~~~d~G~ 374 (395)
T 1bih_A 300 SLKLTVVSAPKYEQKPEK-VIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGG-RATVTDSGLVIKGVKNGDKGY 374 (395)
T ss_dssp EEEEEEEEEEEEEECCCS-EEEECTTSCEEEECEEEEESCCCCEEEETTEECCSS-SEEEETTEEEESSCCSTTCEE
T ss_pred EEEEEEEcCCccccCCCc-ceEecCCCeEEEEEEECcccCCeeEEEECCEECCCC-ceEEECCEEEEeeCCcccCEE
Confidence 678888888887765532 367889999999999999999999999999887543 444556789999999998763
No 38
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.78 E-value=1.8e-18 Score=120.55 Aligned_cols=143 Identities=22% Similarity=0.315 Sum_probs=103.4
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCc---e
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMK---S 79 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~---~ 79 (163)
..+.|.|...+.|.+.|.|++ ++..+.. ....++.....+ +|.|.+++.+|+|.|+|.+.+.... .
T Consensus 114 ~~v~l~C~~~~~p~~~v~W~~-~~~~~~~------~~~~~~~~~~~~----~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~ 182 (291)
T 2wim_A 114 EDAEVVCRVSSSPAPAVSWLY-HNEEVTT------ISDNRFAMLANN----NLQILNINKSDEGIYRCEGRVEARGEIDF 182 (291)
T ss_dssp SCEEECCCCBCSSCCEEEEEC-C----CB------CCCSSEEECTTS----CEEETTCCGGGCEEEEEEEEETTTTEEEE
T ss_pred CCEEEEEEEccCCCCEEEEEE-CCccccc------cCCceEEEccCC----CEEEEecchhhCEEEEEEEEECCCCeeEE
Confidence 357888998889999999999 4443321 123445444433 7999999999999999999766322 2
Q ss_pred EeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceE--EeceEEEEcchhhhHh
Q psy16425 80 QVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQE--DFPFFKRTKKKKKKKK 156 (163)
Q Consensus 80 ~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~--~~~~l~i~~v~~~~~~ 156 (163)
....+.+..+|.+...+......+.+|+.+.|.|.+.|.|.|.+.|++++..+........ .+..|.|.+++.+|.+
T Consensus 183 ~~~~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 261 (291)
T 2wim_A 183 RDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGG 261 (291)
T ss_dssp EEEEEEEEBCCCCBCSCSEEECCSSSCCEEEEECBCCCBSCCEEEEEETTEECCCTTTEEECSTTCEEEEESCCSTTCE
T ss_pred eeEEEEeccCCccccCcccccceecCCCeEEEEEEeecCCCCeEEEEECCEECcCCccEEEcCCccEEEEeeCCcccCE
Confidence 3456777778876654322234577899999999999999999999999988765544332 3467999999998875
No 39
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.77 E-value=2.9e-18 Score=114.69 Aligned_cols=151 Identities=15% Similarity=0.232 Sum_probs=100.6
Q ss_pred ceeEEEeeeeccCCCEEEEEEcC--CceEE--e-eeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCC
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVD--TQTIL--T-IQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPM 77 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~--~~~~~--~-~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~ 77 (163)
..+.|.|...+.+.+.|.|++.+ ..... . .........+|+.... ..++++|.|.+++.+|+|.|.|.+.+...
T Consensus 16 ~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 94 (213)
T 3mj8_L 16 QKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSN-SGNMATLTISKAQAGDEADYYCQSWDGTN 94 (213)
T ss_dssp SCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEE-ETTEEEEEESSCCGGGCEEEEEEEEETTT
T ss_pred CCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEe-cCCEEEEEECCCChhhCEEEEEEeccCCc
Confidence 46889999998999999999842 11111 0 0011111345666554 34567899999999999999999977643
Q ss_pred ----ceEeEEEEEE----cCCcccccCCCCcEEEeCCCcEEEEeEeccC-CC-CeEEEEECCeEEEec---------CCc
Q psy16425 78 ----KSQVGYLEVV----VPPDILDYPTSTDMVIREGSNVTLKCAASGS-PK-PNITWRREGGELIAQ---------GNG 138 (163)
Q Consensus 78 ----~~~~~~l~v~----~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-p~v~W~~~~~~~~~~---------~~~ 138 (163)
......|.|. .+|.+...+. ...+.+|+.+.|.|.+.+. |+ +.+.|++++..+... ...
T Consensus 95 ~~~~~~~~~~l~V~~~~~~~P~i~~~~~--~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~ 172 (213)
T 3mj8_L 95 SAWVFGSGTKVTVLGQPNAAPSVTLFPP--SSEELKTNQATLVCMINGFYPADVAVTWEADGTPITQGVKTTQPSKSDSK 172 (213)
T ss_dssp TEEEEBCCEEEEEECSCCBCCEEEEECC--CHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEEETTE
T ss_pred ceeEEcCceEEEEeCCCCCCCeEEccCC--CcccccCCcEEEEEEeeceeCCCeEEEEEcCCcccCCCcccCCcCccCCc
Confidence 2445677777 4555544332 2223479999999999885 44 489999999887431 111
Q ss_pred eEEeceEEEEcchhhhHh
Q psy16425 139 QEDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 139 ~~~~~~l~i~~v~~~~~~ 156 (163)
......|+|..+..+|.+
T Consensus 173 ~~~~s~L~i~~~~~~d~G 190 (213)
T 3mj8_L 173 YMATSYLTMTADAWKSRN 190 (213)
T ss_dssp EEEEEEEEEESHHHHSCS
T ss_pred EEEEEEEEEeHHHcCCCC
Confidence 123356889988888765
No 40
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.77 E-value=5.1e-18 Score=119.08 Aligned_cols=146 Identities=21% Similarity=0.251 Sum_probs=104.9
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
.++.|.|...+.|.+.|.|++ ++..+. ....++.......+..+|.|.+++.+|+|.|+|.+.+. +.....
T Consensus 20 ~~v~l~C~~~g~p~~~v~W~~-~~~~~~-------~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 91 (305)
T 2nzi_A 20 SNATLVCKVTGHPKPIVKWYR-QGKEII-------ADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSVSGT 91 (305)
T ss_dssp CCEEEEEEEECSSCCEEEEEE-TTEECC-------CCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEeCCCCCeEEEEE-CCEEcc-------cCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEEEcCCCCccce
Confidence 468899999999999999999 554432 12234554444445568999999999999999999776 334455
Q ss_pred EEEEEEcCCcccccC---CCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceE----EeceEEEEc-chhh
Q psy16425 82 GYLEVVVPPDILDYP---TSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQE----DFPFFKRTK-KKKK 153 (163)
Q Consensus 82 ~~l~v~~~p~~~~~~---~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~----~~~~l~i~~-v~~~ 153 (163)
+.|.|..+|.+.... ......+.+|+.+.|.|.+.+.|.|.+.|++++..+........ ....|.|.+ +..+
T Consensus 92 ~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 171 (305)
T 2nzi_A 92 ASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERK 171 (305)
T ss_dssp EEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSSSSCEEEECSSEEEEEETTCCCST
T ss_pred EEEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCCCcEEEEEcCCceEEEEecCCccC
Confidence 667776655432211 11346678899999999999999999999999887755444332 335788888 8887
Q ss_pred hHh
Q psy16425 154 KKK 156 (163)
Q Consensus 154 ~~~ 156 (163)
|.+
T Consensus 172 d~G 174 (305)
T 2nzi_A 172 DAG 174 (305)
T ss_dssp TCE
T ss_pred ccE
Confidence 765
No 41
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.77 E-value=3.2e-18 Score=125.91 Aligned_cols=124 Identities=15% Similarity=0.223 Sum_probs=89.6
Q ss_pred ceeEEEeeeec-cCCCEEEEEEcCCceEEeee---eeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCc
Q psy16425 3 ARMLIEIGEML-MAESTVAWLRVDTQTILTIQ---THVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMK 78 (163)
Q Consensus 3 ~~~~~~~~~~~-~~~~~i~W~k~~~~~~~~~~---~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~ 78 (163)
..+.|.|...+ .|.+.|.|++. +..+.... ..... ..+... ...+|.|.+++.+|+|.|+|.+.|. .
T Consensus 243 ~~v~L~C~~~g~~p~p~i~W~k~-g~~l~~~~~~~~~~~~-~~~~~~-----~~~~L~I~~v~~~D~G~Y~C~A~N~--~ 313 (423)
T 3qs7_E 243 EPLWIRCKAVHVNHGFGLTWELE-NKALEEGNYFEMSTYS-TNRTMI-----RILFAFVSSVARNDTGYYTCSSSKH--P 313 (423)
T ss_dssp SCEEEEEEEEESSSCCCEEEEES-SSBCCGGGEEEEEEEE-TTTEEE-----EEEEEEESSCCTTTCEEEEEEETTE--E
T ss_pred CeEEEEEEEEcCCCCcEEEEEEC-CEEccccceeeccccc-CCceeE-----EEEEEEEeecCHHHCEEEEEEEecC--C
Confidence 36888999988 67799999994 44432110 00001 111111 1237999999999999999999766 6
Q ss_pred eEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEec
Q psy16425 79 SQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQ 135 (163)
Q Consensus 79 ~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~ 135 (163)
...+.|.|..+|.+...+......+.+|+++.|.|.+.|+|.|.+.|++++..+...
T Consensus 314 ~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~ 370 (423)
T 3qs7_E 314 SQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCE 370 (423)
T ss_dssp EEEEEEEEESSCEEEEC---CEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECB
T ss_pred CceEEEEEEeCCcceEcCCCccEEecCCCeEEEEEEEEEcCCCeEEEEECCEECCCc
Confidence 677788888888766555434566788999999999999999999999999988654
No 42
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.77 E-value=2e-18 Score=114.66 Aligned_cols=143 Identities=15% Similarity=0.189 Sum_probs=92.9
Q ss_pred ceeEEEeeeeccCC-----CEEEEEEcCCceEEeeeeeEEecCCeEEEEeCC--CceEEEEEcccCCCCCeEEEEEEEeC
Q psy16425 3 ARMLIEIGEMLMAE-----STVAWLRVDTQTILTIQTHVITKNHRIGVTHSE--TKAWYLHIREVRESDRGWYMCQVNTD 75 (163)
Q Consensus 3 ~~~~~~~~~~~~~~-----~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~~~~~ 75 (163)
.++.|.|...+.|. +.|.|++.++... ...+|+.+.... .++.+|.|.+++.+|+|.|+|.+.+.
T Consensus 18 ~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~--------~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 89 (202)
T 3bp6_B 18 SSVSLECDFDRRECTELEGIRASLQKVENDTS--------LQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVICG 89 (202)
T ss_dssp SCEEEEEEECTTC---CTTEEEEEEECC--CC--------CBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CcEEEEEEecCCCCCCccceEEEEEcCCCccc--------ccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEEeC
Confidence 46889999888876 8999999433322 233455544431 24568999999999999999999766
Q ss_pred CC-ceEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceEE--eceEEEEcchh
Q psy16425 76 PM-KSQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQED--FPFFKRTKKKK 152 (163)
Q Consensus 76 ~~-~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~--~~~l~i~~v~~ 152 (163)
.. ....+.|.|..++..... ......+|+.+.|.|.+.|+|.|.+.|++++..+......... ...+.|.++..
T Consensus 90 ~~~~~~~~~l~V~~~~~~p~~---~~~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~~~~~~~~~~~~~~~i~~v~~ 166 (202)
T 3bp6_B 90 AAWDYKYLTVKVKASYMRIDT---RILEVPGTGEVQLTCQARGYPLAEVSWQNVSVPANTSHIRTPEGLYQVTSVLRLKP 166 (202)
T ss_dssp TEEEEEEEEEEEEBCCCCEEE---EEEECTTTCCEEEEEEEEEBSCCEEEETTCCSCCEEEEEECTTSCEEEEEEEEECC
T ss_pred CCcceEEEEEEecCCCCcccE---EEEecCCCCeEEEEEEccccCCceEEEEeCCCCccCceeeCCCCCEEEEEEEEEEc
Confidence 32 345556666655422211 1124568999999999999999999999988754322111111 13445567766
Q ss_pred hhHh
Q psy16425 153 KKKK 156 (163)
Q Consensus 153 ~~~~ 156 (163)
+|.+
T Consensus 167 ~d~G 170 (202)
T 3bp6_B 167 QPSR 170 (202)
T ss_dssp CTTC
T ss_pred CCCC
Confidence 6643
No 43
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.77 E-value=3.4e-18 Score=116.24 Aligned_cols=145 Identities=20% Similarity=0.338 Sum_probs=98.3
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.|.|...+.|.+.|.|++ ++..+... .......... ...+|.|.+++.+|+|.|+|.+.+. +.....
T Consensus 31 ~~v~L~C~~~~~p~~~v~W~~-~~~~~~~~-----~~~~~~~~~~---~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~ 101 (241)
T 3grw_A 31 NTVRFRCPAAGNPTPSISWLK-NGREFRGE-----HRIGGIKLRH---QQWSLVMESVVPSDRGNYTCVVENKFGSIRQT 101 (241)
T ss_dssp SEEEEECCEECSSCCEEEEEE-TTEECCGG-----GSTTCCEEEG---GGTEEEECSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CeEEEEEEecCCCCceeEEEE-CCcccCCC-----Ccccceeeec---cceEEEEEeCCcccCEEEEEEEeecCCceEEE
Confidence 468899999999999999999 55443211 0011111211 2338999999999999999999765 334455
Q ss_pred EEEEEEcCCc---ccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEE----CCeEEEecCCce------------EEe
Q psy16425 82 GYLEVVVPPD---ILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRR----EGGELIAQGNGQ------------EDF 142 (163)
Q Consensus 82 ~~l~v~~~p~---~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~----~~~~~~~~~~~~------------~~~ 142 (163)
..+.|...+. ...........+.+|+.+.|.|.+.+.|.|.+.|++ ++..+....... ...
T Consensus 102 ~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (241)
T 3grw_A 102 YTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEAD 181 (241)
T ss_dssp EEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCEEEEEEEECSBSEEE
T ss_pred EEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCceeeeeeeEeeeeecCCc
Confidence 6667765321 111112235668889999999999999999999999 665553332211 145
Q ss_pred ceEEEEcchhhhHh
Q psy16425 143 PFFKRTKKKKKKKK 156 (163)
Q Consensus 143 ~~l~i~~v~~~~~~ 156 (163)
..|.|.+++.+|.+
T Consensus 182 ~~L~i~~~~~~d~G 195 (241)
T 3grw_A 182 VRLRLANVSERDGG 195 (241)
T ss_dssp EEEEECSCCGGGCE
T ss_pred eEEEECcCCcccCc
Confidence 67999999988865
No 44
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.77 E-value=1.2e-18 Score=115.77 Aligned_cols=147 Identities=16% Similarity=0.208 Sum_probs=105.2
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEee-ee--eEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCC---
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTI-QT--HVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDP--- 76 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~-~~--~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~--- 76 (163)
..+.|.|...+.|.+.|.|++.+....... .. .......|+.... .+|.|.+++.+|+|.|+|.+.+..
T Consensus 20 ~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-----~~L~i~~~~~~d~G~Y~C~~~~~~g~~ 94 (209)
T 1nbq_A 20 NPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLP-----TGITFKSVTREDTGTYTCMVSEEGGNS 94 (209)
T ss_dssp CCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEET-----TEEECSCCCTTSCSEEEEEEEETTSSC
T ss_pred CCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeec-----cEEEEeeCCHHHCcEEEEEEecCCCCc
Confidence 367888998888999999999544321110 00 0012234555554 289999999999999999997652
Q ss_pred CceEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEe-ccCCCCeEEEEECCeEEEecCCc-----------eEEece
Q psy16425 77 MKSQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAA-SGSPKPNITWRREGGELIAQGNG-----------QEDFPF 144 (163)
Q Consensus 77 ~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~p~v~W~~~~~~~~~~~~~-----------~~~~~~ 144 (163)
.......|.|..+|.+..... ...+.+|+.+.|.|.+ .+.|.|.+.|++++..+...... ....+.
T Consensus 95 ~~~~~~~l~V~~~p~~~~~~~--~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (209)
T 1nbq_A 95 YGEVKVKLIVLVPPSKPTVNI--PSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGE 172 (209)
T ss_dssp EECCEEECCEEBCCCCCCCCC--BSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSSSSCTTCCCCCCTTTCC
T ss_pred cceEEEEEEEecCCcCCCccc--ccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCccccceeeeccceEEcCCcce
Confidence 234456778888887665443 3457889999999997 89999999999999877544321 114468
Q ss_pred EEEEcchhhhHh
Q psy16425 145 FKRTKKKKKKKK 156 (163)
Q Consensus 145 l~i~~v~~~~~~ 156 (163)
|.|.+++.+|.+
T Consensus 173 L~i~~~~~~d~G 184 (209)
T 1nbq_A 173 LVFDPLSASDTG 184 (209)
T ss_dssp EEESSCCGGGCC
T ss_pred EEEEeccccCCe
Confidence 999999999875
No 45
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.76 E-value=3.8e-17 Score=109.10 Aligned_cols=126 Identities=19% Similarity=0.227 Sum_probs=97.1
Q ss_pred ceeEEEeeeeccCCCE-EEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCceEe
Q psy16425 3 ARMLIEIGEMLMAEST-VAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~-i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~ 81 (163)
..+.|.|...+.|.+. |.|++ ++..+.. .. .+|.|.+++.+|+|.|+|.+.+ ...+..
T Consensus 23 ~~v~L~C~~~~~p~~~~v~W~k-~g~~l~~--------~~-----------~~L~i~~v~~~D~G~Y~C~a~n-~~~s~~ 81 (204)
T 3sgj_C 23 DSVTLKCQGAYSPEDQSTQWFH-NESLISS--------QA-----------SSYFIDAATVDDSGEYRCQTQL-STLSDP 81 (204)
T ss_dssp CCEEEEEECCSSSSCCCEEEEE-TTEEESC--------CS-----------SEEEESSCCGGGCEEEEEEETT-SBCCCC
T ss_pred CCEEEEEcCCCCCCCcEEEEEE-CCEEccc--------Cc-----------cEEEEecccccCCEEEEEEeCC-Cccccc
Confidence 4688999998888776 99999 5554411 11 2899999999999999999954 445566
Q ss_pred EEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccC-CCCeEEEEECCeEEEecCCceEEeceEEEEcchhhhHh
Q psy16425 82 GYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGS-PKPNITWRREGGELIAQGNGQEDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 82 ~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p~v~W~~~~~~~~~~~~~~~~~~~l~i~~v~~~~~~ 156 (163)
+.|.|..+|.+...+ ...+.+|+++.|.|.+.+. |.+.+.|++++..+.. ...++.|.|.+++.+|.+
T Consensus 82 ~~l~V~~~p~~~~~~---~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~----~~~~~~L~i~~v~~~D~G 150 (204)
T 3sgj_C 82 VQLEVHIGWLLLQAP---RWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKY----FHHNSDFYIPKATLKDSG 150 (204)
T ss_dssp EEEEEECSSEEEECS---CSEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEE----EEECCCEEESSCCGGGCE
T ss_pred EEEEEecCceEecCC---ceeEeCCCcEEEEEEecCCCCCceEEEEECCcEeec----ccCCceEEECcCCcccCE
Confidence 788888877665544 3567889999999999765 6688999999988643 234567999999998875
No 46
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.76 E-value=5.9e-18 Score=114.11 Aligned_cols=145 Identities=18% Similarity=0.285 Sum_probs=98.1
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.|.|...+.|.+.|.|++ ++..+.... ......... ++.+|.|.+++.+|+|.|+|.+.+. +.....
T Consensus 35 ~~v~L~C~~~~~p~~~v~W~~-~~~~~~~~~-----~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~ 105 (231)
T 3ojm_B 35 NTVKFRCPAGGNPMPTMRWLK-NGKEFKQEH-----RIGGYKVRN---QHWSLIMESVVPSDKGNYTCVVENEYGSINHT 105 (231)
T ss_dssp SCEEEECCEEEESCCEEEEEE-TTEECCGGG-----STTCCEEEG---GGTEEEECSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CCEEEEEecccCCCCeEEEEE-CCccccccc-----cccceeeec---CcceEEEecCCcccCEEEEEEEecccCccccc
Confidence 468899999999999999999 554432110 001111111 2348999999999999999999765 334455
Q ss_pred EEEEEEcCCc---ccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEE----CCeEEEecCCce-----------EEec
Q psy16425 82 GYLEVVVPPD---ILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRR----EGGELIAQGNGQ-----------EDFP 143 (163)
Q Consensus 82 ~~l~v~~~p~---~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~----~~~~~~~~~~~~-----------~~~~ 143 (163)
..+.|...+. ...........+.+|+.+.|.|.+.+.|.|.+.|++ ++..+....... ....
T Consensus 106 ~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (231)
T 3ojm_B 106 YHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAE 185 (231)
T ss_dssp EEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTTSCBCEEEEEECSTTCSCTT
T ss_pred EEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCCCcceEeEecccccccCCcc
Confidence 6677765332 222122245678899999999999999999999999 665443222111 1335
Q ss_pred eEEEEcchhhhHh
Q psy16425 144 FFKRTKKKKKKKK 156 (163)
Q Consensus 144 ~l~i~~v~~~~~~ 156 (163)
.|.|.+++.+|.+
T Consensus 186 ~L~i~~~~~~d~G 198 (231)
T 3ojm_B 186 VLALFNVTEADAG 198 (231)
T ss_dssp EEEECSCCGGGCE
T ss_pred EEEEecCCHHHCe
Confidence 6999999998865
No 47
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.76 E-value=1.1e-17 Score=112.54 Aligned_cols=128 Identities=23% Similarity=0.322 Sum_probs=96.0
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCc--eE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMK--SQ 80 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~--~~ 80 (163)
..+.|.|...+.|.+.|.|++ ++..+.. . ...+|.|.+++.+|+|.|+|.+.+.... +.
T Consensus 34 ~~v~L~C~~~~~p~~~v~W~~-~~~~~~~--------~----------~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~s~ 94 (218)
T 3k0w_A 34 QFVKLCCRATGHPFVQYQWFK-MNKEIPN--------G----------NTSELIFNAVHVKDAGFYVCRVNNNFTFEFSQ 94 (218)
T ss_dssp SBEEEECEETTTTSSEEEEEE-TTEECTT--------C----------CSSEEEETTCCGGGCEEEEEEEECTTCCEECC
T ss_pred CcEEEEeeecCCCCCEEEEEE-CCEECCC--------C----------CCCEEEEccCChhhCeEeEEEEEcCCCCceee
Confidence 468899999999999999999 4443311 0 1238999999999999999999766322 44
Q ss_pred eEEEEEEcCC---------------cccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceEEeceE
Q psy16425 81 VGYLEVVVPP---------------DILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQEDFPFF 145 (163)
Q Consensus 81 ~~~l~v~~~p---------------~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~l 145 (163)
.+.|.|...+ .+...+ ....+.+|+.+.|.|.+.+.|.|.+.|++++..+... ....|
T Consensus 95 ~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~--~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~-----~~~~L 167 (218)
T 3k0w_A 95 WSQLDVCDIPESFQRSVDGVSESKLQICVEP--TSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHE-----TKKLY 167 (218)
T ss_dssp CEEEEEECCCGGGCTTCCSBCCSSCEEEECC--CCEEECTTCCEEEECEEEBSSCCEEEEEETTEECTTC-----CSSEE
T ss_pred EEEEEEEccCcccccccccccCCCceEEECC--CceeecCCCcEEEEEEecccCCCeEEEEECCEECCCC-----CCCEE
Confidence 4677777653 232222 3567889999999999999999999999999876433 23568
Q ss_pred EEEcchhhhHh
Q psy16425 146 KRTKKKKKKKK 156 (163)
Q Consensus 146 ~i~~v~~~~~~ 156 (163)
.|.+++.+|.+
T Consensus 168 ~i~~v~~~d~G 178 (218)
T 3k0w_A 168 MVPYVDLEHQG 178 (218)
T ss_dssp EESSCCGGGCE
T ss_pred EEeecChhcCE
Confidence 89888888865
No 48
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.76 E-value=5.6e-18 Score=112.22 Aligned_cols=138 Identities=16% Similarity=0.129 Sum_probs=84.8
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCC---Cce
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDP---MKS 79 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~---~~~ 79 (163)
.++.|.|...+.|. .+.|+| ++..+..... ..........|.|.+++.+|+|.|+|.+.+.. ..+
T Consensus 20 ~~v~L~C~~~~~~~-~~~W~k-~g~~~~~~~~----------~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s 87 (196)
T 2d3v_A 20 NSVTIRCQGTLEAQ-EYRLVK-EGSPEPWDTQ----------NPLEPKNKARFSIPSMTEHHAGRYRCYYYSPAGWSEPS 87 (196)
T ss_dssp CCEEEEEECCTTCC-EEEEEE-TTCSSCSEEE----------CCCSSTTEEEEEESSCCGGGCEEEEEEEEETTEECBCC
T ss_pred CeEEEEEeCCCCCc-EEEEEE-CCCCCCcccc----------cccCCccccEEEeccCChhHCeEEEEEEeCCCCcCCcC
Confidence 46888998887766 999999 4443311100 00011234589999999999999999997653 223
Q ss_pred EeEEEEEEc---CCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCc------eEEeceEEEEcc
Q psy16425 80 QVGYLEVVV---PPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNG------QEDFPFFKRTKK 150 (163)
Q Consensus 80 ~~~~l~v~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~------~~~~~~l~i~~v 150 (163)
..+.|.|.. +|.+... ....+.+|+++.|.|.+.+.| +.+.|++++..+...... ....+.|.|.+|
T Consensus 88 ~~~~l~V~~~~~~p~i~~~---~~~~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~~~~~~~~~~~~~~~~~~~L~I~~v 163 (196)
T 2d3v_A 88 DPLELVVTGFYNKPTLSAL---PSPVVTSGENVTLQCGSRLRF-DRFILTEEGDHKLSWTLDSQLTPSGQFQALFPVGPV 163 (196)
T ss_dssp CCEEEEEECSSCCCEEEC--------------CEEEEEESSCC-SEEEEEEC---CCEEEEECEECTTSCEEEEEECCCC
T ss_pred ccEEEEecCCCCCCeEEcc---CCccccCCCcEEEEEEcCCCC-CEEEEEccCCcccccccccccccCCCceeEEEeeec
Confidence 456777776 3333322 234678999999999999988 899999999876322111 113368999999
Q ss_pred hhhhHh
Q psy16425 151 KKKKKK 156 (163)
Q Consensus 151 ~~~~~~ 156 (163)
+.+|++
T Consensus 164 ~~~D~G 169 (196)
T 2d3v_A 164 TPSHRW 169 (196)
T ss_dssp BTTBCE
T ss_pred CcccCe
Confidence 999876
No 49
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.76 E-value=1.3e-17 Score=109.17 Aligned_cols=139 Identities=16% Similarity=0.219 Sum_probs=95.9
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeee-eEE----ecCCeEEEEeC--CCceEEEEEcccCCCCCeEEEEEEEeC
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQT-HVI----TKNHRIGVTHS--ETKAWYLHIREVRESDRGWYMCQVNTD 75 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~-~~~----~~~~r~~~~~~--~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 75 (163)
.++.|.|...+.|.+.|.|++.+...+..... ... ....|+..... ..+..+|.|.+++.+|+|.|+|.+.+.
T Consensus 11 ~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~ 90 (184)
T 2ny1_B 11 DTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVEDQ 90 (184)
T ss_dssp SCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEEEEEETTE
T ss_pred CCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEEEEEEEcC
Confidence 46888999888999999999954332221111 001 11334444332 223457999999999999999999543
Q ss_pred CCceEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceEEeceEEEEcchhhhH
Q psy16425 76 PMKSQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQEDFPFFKRTKKKKKKK 155 (163)
Q Consensus 76 ~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~l~i~~v~~~~~ 155 (163)
...+.|.|.. +.. + ....+.+|+++.|.|.+.+.|.|.+.|++++..+ ......|.|.+++.+|+
T Consensus 91 ---~~~~~l~V~~---~~~-~--~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~------~~~~~~L~i~~v~~~d~ 155 (184)
T 2ny1_B 91 ---KEEVQLLVFG---LTA-N--SDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKN------IQGGKTLSVSQLELQDS 155 (184)
T ss_dssp ---EEEEEEEEEE---EEE-S--SCSEEETTCCEEEEEECCTTCCCEEEEECTTSCE------EEESSEEEESSCCGGGC
T ss_pred ---CCcEEEEEEE---ecC-C--CCceeecCCCEEEEEEcCCCCCCEEEEEeCCCcc------ccCceEEEEecCCcCCC
Confidence 2244555553 111 1 2346789999999999999999999999998665 33557799999999987
Q ss_pred h
Q psy16425 156 K 156 (163)
Q Consensus 156 ~ 156 (163)
+
T Consensus 156 G 156 (184)
T 2ny1_B 156 G 156 (184)
T ss_dssp E
T ss_pred e
Confidence 6
No 50
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.76 E-value=3.7e-17 Score=108.98 Aligned_cols=139 Identities=12% Similarity=0.100 Sum_probs=94.1
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCC-CceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDP-MKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~-~~~~~ 81 (163)
.++.|.|...+.|.+.|.|++..+..+ .++.... .....|.|.+++.+|+|.|.|.+.+.. ..+..
T Consensus 17 ~~v~L~C~~~g~P~p~i~W~~~~~~~~----------~~~~~~~---~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~ 83 (202)
T 1vca_A 17 DSVSLTCSTTGCESPFFSWRTQIDSPL----------NGKVTNE---GTTSTLTMNPVSFGNEHSYLCTATCESRKLEKG 83 (202)
T ss_dssp SCEEEEEEEESCSSCEEEEEETTCCCC----------SSEEEEE---TTEEEEEESSCCGGGCSEEEEEEEETTEEEEEE
T ss_pred CcEEEEEeecCCCCCeEEEECCCCCCc----------cceEEEc---CCccEEEECcCCHHHCEEEEEEEEECCceEeeE
Confidence 468899999989999999998432221 1111111 123479999999999999999997763 34456
Q ss_pred EEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccC-CC--CeEEEEECCeEEEecCCc--------eEEeceEEEEcc
Q psy16425 82 GYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGS-PK--PNITWRREGGELIAQGNG--------QEDFPFFKRTKK 150 (163)
Q Consensus 82 ~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~--p~v~W~~~~~~~~~~~~~--------~~~~~~l~i~~v 150 (163)
+.|.|..+|....... ...+.+|+.+.|.|.+.+. |. +.++|++++..+...... ......|+|..+
T Consensus 84 ~~l~V~~~p~~~~~~~--~~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~~ 161 (202)
T 1vca_A 84 IQVEIYSFPKDPEIHL--SGPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPV 161 (202)
T ss_dssp EEEEEEBCCSCCEEEE--SSCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEECCC
T ss_pred EEEEEEeCCCCCEeCC--ceEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEEEEEEee
Confidence 6788887776443332 2457899999999999875 43 369999999887543211 112345567766
Q ss_pred hhhhHh
Q psy16425 151 KKKKKK 156 (163)
Q Consensus 151 ~~~~~~ 156 (163)
..+|.+
T Consensus 162 ~~d~~g 167 (202)
T 1vca_A 162 IEDIGK 167 (202)
T ss_dssp GGGTTC
T ss_pred eccCCC
Confidence 655543
No 51
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.76 E-value=1.2e-17 Score=117.39 Aligned_cols=140 Identities=14% Similarity=0.148 Sum_probs=98.4
Q ss_pred eEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCceEeEEE
Q psy16425 5 MLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKSQVGYL 84 (163)
Q Consensus 5 ~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~l 84 (163)
+.|.|. .+.|.+.|.|++ ++..+ ....|+.....+ +..+|.|.+++.+|+|.|+|.+.+.........+
T Consensus 21 l~~~~~-~~~p~~~v~W~k-~~~~i--------~~~~~~~~~~~~-~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~s~~l 89 (312)
T 2y23_A 21 LNFECD-KMTPKSEFSWSK-DYVST--------EDSPRLEVESKG-NKTKMTFKDLGMDDLGIYSCDVTDTDGIASSYLI 89 (312)
T ss_dssp EEEECS-SCCTTCCEEEEE-TTEEC--------TTCTTEEEEEET-TEEEEEESSCCGGGCEEEEEEESSSCCCCEEEEE
T ss_pred EEEEEe-CCCCCcEEEEEE-CCEEC--------CCCCCEEEEEeC-CEEEEEECcCCccCCEEEEEEEEeCCCcEEEEEE
Confidence 344454 567899999999 55544 234455555432 3458999999999999999999765433334444
Q ss_pred EEEc------------CCcccccCCCCcEEEeCCCcEEEEeEec-cCCCCeEEEEECCeEEEecCCceEEe------ceE
Q psy16425 85 EVVV------------PPDILDYPTSTDMVIREGSNVTLKCAAS-GSPKPNITWRREGGELIAQGNGQEDF------PFF 145 (163)
Q Consensus 85 ~v~~------------~p~~~~~~~~~~~~~~~g~~~~l~C~~~-~~p~p~v~W~~~~~~~~~~~~~~~~~------~~l 145 (163)
.+.. +|.+...+. ....+.+|+.+.|.|.+. +.|.|.+.|++++..+.......... ..|
T Consensus 90 ~v~~~~~~~~~~~~~~~p~~~~~~~-~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~L 168 (312)
T 2y23_A 90 DEEELKRLLALSHEHKFPTVPVKSE-LAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEM 168 (312)
T ss_dssp CHHHHHHHHHHHHHHHSCBCCEEEE-EEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTTTEEEE
T ss_pred EEeeeeeeecccccCCCCccccccC-CceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCCCEEEE
Confidence 4432 454443221 256788999999999998 89999999999999886655443321 239
Q ss_pred EEEcchhhhHh
Q psy16425 146 KRTKKKKKKKK 156 (163)
Q Consensus 146 ~i~~v~~~~~~ 156 (163)
.|.+++.+|++
T Consensus 169 ~i~~~~~~d~G 179 (312)
T 2y23_A 169 FMEKLQDEDEG 179 (312)
T ss_dssp EESCCCGGGCE
T ss_pred EEccCCcccCE
Confidence 99999999876
No 52
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.76 E-value=1.4e-17 Score=117.47 Aligned_cols=142 Identities=15% Similarity=0.127 Sum_probs=98.1
Q ss_pred eEEEeee-eccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCc--eE
Q psy16425 5 MLIEIGE-MLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMK--SQ 80 (163)
Q Consensus 5 ~~~~~~~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~--~~ 80 (163)
+++.|.. .+.|.+.+.|++ ++..+...........+++.... .|.|.++...|+|.|+|.+.+. +.. ..
T Consensus 135 ~~~~C~~~~~~P~~~i~W~~-~~~~~~~~~~~~~~~~~~~~~~s------~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~ 207 (313)
T 4fqp_A 135 PMARCVSTGGRPPAQITWHS-DLGGMPNTSQVPGFLSGTVTVTS------LWILVPSSQVDGKNVTCKVEHESFEKPQLL 207 (313)
T ss_dssp EEEEEEEEEEBSCCEEEEEE-TTCCEEEEEEEECSSTTCEEEEE------EEEECCCGGGTTCEEEEEEECTTSSSCEEE
T ss_pred EEEEEEccCccCCcEEEeec-CCccccccceeeeecccccccce------eeeecccccccCeeEEEEEEccCcCcccee
Confidence 4555654 478899999999 45444332222222333333322 6899999999999999999775 222 33
Q ss_pred eEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCC-eEEEEECCeEEEecCCceEEeceEEEEcchhhhHh
Q psy16425 81 VGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKP-NITWRREGGELIAQGNGQEDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 81 ~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p-~v~W~~~~~~~~~~~~~~~~~~~l~i~~v~~~~~~ 156 (163)
...|.|.++|.+...+. ....+.+|+.+.|.|.+.|+|.| .+.|++++..+.. .....++.|.|.+++.+|++
T Consensus 208 ~~~l~V~~~P~v~~~~~-~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~--~~~~~~~~L~i~~v~~~d~G 281 (313)
T 4fqp_A 208 TVNLTVYYPPEVSISGY-DNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPP--FAVAQGAQLLIRPVDKPINT 281 (313)
T ss_dssp EEECCBCEEEEEEEECC-CSCEETTCCCEEEEEEEEEESCCCEEEEEETTBSCCT--TEEEETTEEEECCCSSCCEE
T ss_pred eeecccccCCccccccc-cceeecCCCeEEEEEEecCCCCCcEEEEEECCEECCC--ceEEeCCEEEECcCChhhCE
Confidence 44556666776654333 24556788999999999999999 6999999987632 23346678999999998875
No 53
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.75 E-value=3e-17 Score=117.33 Aligned_cols=150 Identities=17% Similarity=0.134 Sum_probs=101.1
Q ss_pred ceeEEEeeeeccC-----------CCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEE
Q psy16425 3 ARMLIEIGEMLMA-----------ESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQ 71 (163)
Q Consensus 3 ~~~~~~~~~~~~~-----------~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 71 (163)
..+.|.|...+.| .+.|.|++.+................++..... +|.|.+++.+|+|.|+|.
T Consensus 23 ~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~-----~L~i~~~~~~D~G~Y~C~ 97 (349)
T 4dep_C 23 EPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEKD-----VLWFRPTLLNDTGNYTCM 97 (349)
T ss_dssp SCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEEEETT-----EEEESSCCGGGCEEEEEE
T ss_pred CeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEeecCC-----EEEEccCChhhCEEEEEE
Confidence 3678888887655 499999995421100000000012234433322 899999999999999999
Q ss_pred EEeC-CCceEeEEEEEEcCCcccccCC--CCcEEEeCCCcEEEEeEe-----ccCCCCeEEEEECCeEEEecCCceEEec
Q psy16425 72 VNTD-PMKSQVGYLEVVVPPDILDYPT--STDMVIREGSNVTLKCAA-----SGSPKPNITWRREGGELIAQGNGQEDFP 143 (163)
Q Consensus 72 ~~~~-~~~~~~~~l~v~~~p~~~~~~~--~~~~~~~~g~~~~l~C~~-----~~~p~p~v~W~~~~~~~~~~~~~~~~~~ 143 (163)
+.+. +.....+.|.|..+|....... .....+.+|+.+.|.|.+ .+.|.|.+.|++++..+.........+.
T Consensus 98 a~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~~~~~~~~~ 177 (349)
T 4dep_C 98 LRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFNNVIPEGM 177 (349)
T ss_dssp EECSSCEEEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSCSSEEEETT
T ss_pred EecCCceEEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCccceeecCC
Confidence 9765 3344556777777654332221 124567889999999985 6789999999999998754444445667
Q ss_pred eEEEEcchhhhHhh
Q psy16425 144 FFKRTKKKKKKKKK 157 (163)
Q Consensus 144 ~l~i~~v~~~~~~~ 157 (163)
.|.|.+++.+|.+.
T Consensus 178 ~L~i~~v~~~d~G~ 191 (349)
T 4dep_C 178 NLSFLIALISNNGN 191 (349)
T ss_dssp EEEEESCCGGGCEE
T ss_pred EEEEeeeeecCCcE
Confidence 89999999998763
No 54
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.75 E-value=7.4e-17 Score=114.74 Aligned_cols=138 Identities=15% Similarity=0.273 Sum_probs=99.9
Q ss_pred ceeEEEeeeeccC-CCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC---CCc
Q psy16425 3 ARMLIEIGEMLMA-ESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD---PMK 78 (163)
Q Consensus 3 ~~~~~~~~~~~~~-~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~---~~~ 78 (163)
..+.|.|...+.| .+.|.|++ ++..+. ....++... .+ .|.|.+++.+|+|.|+|.+.+. +..
T Consensus 144 ~~v~L~C~~~g~p~~~~i~W~k-~~~~l~-------~~~~~~~~~-~~----~L~I~~v~~~D~G~Y~C~a~n~~~~g~~ 210 (329)
T 3oq3_B 144 YGIDLYCGILYAKHYNNITWYK-NNQELI-------IDGTKYSQS-GQ----NLIIHNPELEDSGRYDCYVHYDDVRIKN 210 (329)
T ss_dssp TCEEEECCCCSCCCCCEEEEEE-TTEECC-------CSSSSEEEE-TT----EEEECSCCGGGCEEEEEEEEECCTTSSS
T ss_pred CcEEEEeccCCCCCCceEEEEE-CCccCC-------CCCceEecC-CC----EEEEeecChhhCEEEEEEEEecccCCCc
Confidence 3688999999999 89999999 554431 123344433 22 8999999999999999999763 222
Q ss_pred eE----eEEEEEEcCC----cccccCCCCcEEEeCCCcEEEEeEeccCC---CC-eEEEEECCeEEEecCCce-------
Q psy16425 79 SQ----VGYLEVVVPP----DILDYPTSTDMVIREGSNVTLKCAASGSP---KP-NITWRREGGELIAQGNGQ------- 139 (163)
Q Consensus 79 ~~----~~~l~v~~~p----~~~~~~~~~~~~~~~g~~~~l~C~~~~~p---~p-~v~W~~~~~~~~~~~~~~------- 139 (163)
.. .+.|.|..+| .+. .+ ....+.+|+.+.|.|.+.+.| .| .+.|++++..+.......
T Consensus 211 ~~~~s~~~~l~V~~~~~~~~~~~-~~--~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i~~~~~~~~~~~~~~ 287 (329)
T 3oq3_B 211 DIVVSRCKILTVIPSQDHRFKLI-LD--PKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGLDFGVYSILTSS 287 (329)
T ss_dssp CEEEEEEEEEEEECCCCCCEEEE-CC--SEEEECTTSCEEEEEEEEETTCCTTCCEEEEECTTSCBCCBCSSEEEEEEEE
T ss_pred eeEEEeeEEEEEECCCCCCCcee-cC--CeeEEecCCCEEEEEEEEECCCCCCCcEEEEEECCeeeeccCCceeeeeccc
Confidence 22 2567777666 222 22 357788999999999999988 77 889999998753332211
Q ss_pred --EEeceEEEEcchhhhHh
Q psy16425 140 --EDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 140 --~~~~~l~i~~v~~~~~~ 156 (163)
.....|+|.+++.+|.+
T Consensus 288 ~~~~~~~L~I~~v~~~D~G 306 (329)
T 3oq3_B 288 GGITEATLYFENVTEEYIG 306 (329)
T ss_dssp TTEEEEEEEESSCCGGGTT
T ss_pred CceeEeEEEEEeccHHHCC
Confidence 14578999999999987
No 55
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.75 E-value=6.8e-17 Score=108.52 Aligned_cols=126 Identities=21% Similarity=0.276 Sum_probs=86.6
Q ss_pred ceeEEEeeeeccC-----CCEEEEEEcCCceEEeeee-eE------EecCCeEEEEeC--CCceEEEEEcccCCCCCeEE
Q psy16425 3 ARMLIEIGEMLMA-----ESTVAWLRVDTQTILTIQT-HV------ITKNHRIGVTHS--ETKAWYLHIREVRESDRGWY 68 (163)
Q Consensus 3 ~~~~~~~~~~~~~-----~~~i~W~k~~~~~~~~~~~-~~------~~~~~r~~~~~~--~~~~~~L~i~~v~~~d~G~Y 68 (163)
.++.|.|...+.| .+.|.|++.+ ..+..... .. ....+|..+... ..++.+|.|.+++.+|+|.|
T Consensus 17 ~~v~L~C~~~~~p~~~~~~~~v~W~~~~-~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 95 (222)
T 3sbw_C 17 SNMTIECKFPVEKQLDLAALIVYWEMED-KNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDVKLQDAGVY 95 (222)
T ss_dssp SCEEEEEECCCCSSCCTTTCEEEEEETT-EEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSCCGGGCEEE
T ss_pred CcEEEEeEecCCCCCCCccEEEEEEECC-cEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCcccccCeEE
Confidence 4688889876555 4589999943 33322211 10 112356665543 24567999999999999999
Q ss_pred EEEEEeCCCceEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeE
Q psy16425 69 MCQVNTDPMKSQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGE 131 (163)
Q Consensus 69 ~C~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~ 131 (163)
+|.+.+.+.....+.|.|..++...... ....+.+|+.+.|.|.+.|.|.|.+.|+++++.
T Consensus 96 ~C~~~~~~~~~~~~~l~V~~~~~~~~~~--~~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~ 156 (222)
T 3sbw_C 96 RCMISYGGADYKRITVKVNAPYNKINQR--ILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQ 156 (222)
T ss_dssp EEEEESSSEEEEEEEEEEEBCCCCCEEE--EEEEETTTTEEEEEEEEEEBSCCEEEEEETTCC
T ss_pred EEEEEeCCCceeEEEEEEECCCCCCCce--eeeeecCCCcEEEEEEecCCCCCeEEEEECCCc
Confidence 9999775545556677777665443211 112567899999999999999999999998443
No 56
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.75 E-value=2.9e-18 Score=113.37 Aligned_cols=142 Identities=25% Similarity=0.329 Sum_probs=96.1
Q ss_pred ceeEEEee-eeccCC-CEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCC-Cce
Q psy16425 3 ARMLIEIG-EMLMAE-STVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDP-MKS 79 (163)
Q Consensus 3 ~~~~~~~~-~~~~~~-~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~-~~~ 79 (163)
..+.|.|. ..+.|. +.|.|++. +..+.. ....+...... +.+|.|.+++.+|+|.|+|.+.+.. ...
T Consensus 24 ~~v~L~C~~~~~~p~~~~v~W~~~-~~~~~~------~~~~~~~~~~~---~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~ 93 (201)
T 3s97_C 24 KGMVLLCDPPYHFPDDLSYRWLLN-EFPVFI------TMDKRRFVSQT---NGNLYIANVEASDKGNYSCFVSSPSITKS 93 (201)
T ss_dssp CCEEECCCCCSEESSCCEEEEEES-STTCBC------CCSSSEEECTT---TCCEEESSCCGGGCEEEEEEEEEGGGTEE
T ss_pred CCEEEeccccccCCCceEEEEEEC-Cceeee------eeCCCeEEEcC---CCeEEECcCCcccCeEEEEEEEecCCCcc
Confidence 35788898 778888 99999994 443321 11222222211 2379999999999999999997642 222
Q ss_pred E---eEEEEEE-------cCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceEEeceEEEEc
Q psy16425 80 Q---VGYLEVV-------VPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQEDFPFFKRTK 149 (163)
Q Consensus 80 ~---~~~l~v~-------~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~l~i~~ 149 (163)
. ...+.+. .+|.+...+ ....+.+|+.+.|.|.+.+.|.|.+.|++++..+.........+..|.|.+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~p~~~~~~--~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~L~i~~ 171 (201)
T 3s97_C 94 VFSKFIPLIPIPERTTKPYPADIVVQF--KDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFN 171 (201)
T ss_dssp EECCCEEEEEECCSSCCCEEEEEEEEC--CCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCTTCEEETTTTEEEECS
T ss_pred hhhcccceeeccccccCCCCCceEecC--CceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCCceeecCCCCEEEEcc
Confidence 1 2233332 123333322 256788999999999999999999999999986653322223567899999
Q ss_pred chhhhHh
Q psy16425 150 KKKKKKK 156 (163)
Q Consensus 150 v~~~~~~ 156 (163)
++.+|.+
T Consensus 172 v~~~d~G 178 (201)
T 3s97_C 172 IQLEDEG 178 (201)
T ss_dssp CCGGGCE
T ss_pred CChhhCE
Confidence 9998875
No 57
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.75 E-value=5.3e-17 Score=105.65 Aligned_cols=126 Identities=21% Similarity=0.262 Sum_probs=94.5
Q ss_pred ceeEEEeeeeccCCCE-EEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCceEe
Q psy16425 3 ARMLIEIGEMLMAEST-VAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~-i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~ 81 (163)
..+.|.|...+.|.+. +.|++ ++..+. . .+.+|.|.+++.+|+|.|+|.+.+. ..+..
T Consensus 23 ~~v~L~C~~~~~p~~~~~~W~~-~~~~~~--------~-----------~~~~L~i~~~~~~d~G~Y~C~~~n~-~~s~~ 81 (175)
T 1fnl_A 23 DSVTLKCQGAYSPEDNSTQWFH-NESLIS--------S-----------QASSYFIDAATVNDSGEYRCQTNLS-TLSDP 81 (175)
T ss_dssp CCEEEEEECCCBTTBCCCEEEE-TTEEEE--------S-----------SCSEEEESSCCGGGCEEEEEECSSS-CCCCC
T ss_pred CcEEEEeeCCCCCCCcceEEEE-CCEEcc--------C-----------CceEEEEeCCCcccCEEEEEEeeCC-ccccc
Confidence 3678899888887766 78999 554432 0 1228999999999999999999653 34556
Q ss_pred EEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCC-eEEEEECCeEEEecCCceEEeceEEEEcchhhhHh
Q psy16425 82 GYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKP-NITWRREGGELIAQGNGQEDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 82 ~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p-~v~W~~~~~~~~~~~~~~~~~~~l~i~~v~~~~~~ 156 (163)
+.|.|..++.....+ ...+.+|+.+.|.|.+.+.|++ .+.|++++..+.. ...+..|.|.+++.+|.+
T Consensus 82 ~~l~V~~~~~~~~~~---~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~----~~~~~~L~i~~v~~~d~G 150 (175)
T 1fnl_A 82 VQLEVHIGWLLLQAP---RWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKY----FHHNSDFHIPKATLKDSG 150 (175)
T ss_dssp EEEEEECSSEEEECS---CSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEE----EEECCCEEESSCCGGGCE
T ss_pred EEEEEeCCCceeeCC---CceecCCCCEEEEEEcCCCCCceEEEEEECCeEccC----CCCCCEEEEcccChhhCe
Confidence 677777555444332 3567899999999999887654 9999999988743 235578999999999875
No 58
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.75 E-value=7.5e-18 Score=110.63 Aligned_cols=129 Identities=14% Similarity=0.131 Sum_probs=91.3
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCC---Cce
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDP---MKS 79 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~---~~~ 79 (163)
..+.|.|...+ +.+.+.|++. +... ... ...|.|.+++.+|+|.|+|.+.+.. ..+
T Consensus 23 ~~v~L~C~~~~-~~~~~~W~k~-g~~~---------------~~~----~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s 81 (184)
T 2gi7_A 23 KPVTLRCQGPP-GVDLYRLEKL-SSSR---------------YQD----QAVLFIPAMKRSLAGRYRCSYQNGSLWSLPS 81 (184)
T ss_dssp CCEEEEEECST-TCSEEEEEET-TTCC---------------EES----SSEEEESSCCGGGCEEEEEEEEETTEEBCCC
T ss_pred CcEEEEEeCCC-CCCEEEEEEC-Cccc---------------cCc----ccEEEECcCChhhCceEEEEEEcCCCccCCC
Confidence 46888898876 7889999994 4331 011 1289999999999999999997753 223
Q ss_pred EeEEEEEEc---CCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceEEeceEEEEcchhhhHh
Q psy16425 80 QVGYLEVVV---PPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQEDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 80 ~~~~l~v~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~l~i~~v~~~~~~ 156 (163)
..+.|.|.. +|.+...+ ...+.+|+++.|.|.+.+.| +.+.|++++..+.........++.|.|.+|+.+|.+
T Consensus 82 ~~~~l~V~~~~~~p~i~~~p---~~~v~~G~~v~l~C~~~~~~-~~~~w~k~g~~~~~~~~~~~~~~~L~i~~v~~~D~G 157 (184)
T 2gi7_A 82 DQLELVATGVFAKPSLSAQP---GPAVSSGGDVTLQCQTRYGF-DQFALYKEGDPAPYKNPERWYRASFPIITVTAAHSG 157 (184)
T ss_dssp CCEEEEEESSSCCCEEEEEC---CCSSCCTTCEEEEEECSSCC-CEEEEEECCCCTTSCCCCEEEEESSSEEEETTCCSE
T ss_pred CCEEEEecCcCCCCEEEeCC---CceecCCCcEEEEEEcCCCC-cEEEEEECCCcCcceecCCCceEEEEEccCCccCCe
Confidence 445666643 33343322 23467899999999987654 699999999876443333345678899999988875
No 59
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.74 E-value=3.4e-17 Score=115.32 Aligned_cols=131 Identities=18% Similarity=0.369 Sum_probs=91.1
Q ss_pred cCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCceEeEEEEEEc-----
Q psy16425 14 MAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKSQVGYLEVVV----- 88 (163)
Q Consensus 14 ~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~l~v~~----- 88 (163)
.|.+.+.|++ ++..+. ...++.....+ ....|.|.+++.+|+|.|+|.+.+. .......+.+.+
T Consensus 135 ~p~~~i~W~~-~~~~~~--------~~~~~~~~~~~-~~~~L~i~~~~~~d~G~Y~C~a~n~-~g~~~~~~~l~v~~~~~ 203 (317)
T 2y25_A 135 VEDLKVNWSH-NGSAIR--------YSDRVKTGVTG-EQIWLQINEPTPNDKGKYVMELFDG-KTGHQKTVDLSGQAYDE 203 (317)
T ss_dssp CSSCEEEEEE-SSSBCC--------CCSSEEEEECS-SEEEEEEESCCGGGCEEEEEEEECS-SCEEEEEEEECHHHHHH
T ss_pred CCCcEEEEEE-CCEECC--------CCCCeEEeccC-CEEEEEECcCCcccCeeEEEEEEeC-CceEEEEEEEeeeeccc
Confidence 6899999999 555442 22344443332 3457999999999999999999764 223333344331
Q ss_pred -----------------CCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceEEe-----ceEE
Q psy16425 89 -----------------PPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQEDF-----PFFK 146 (163)
Q Consensus 89 -----------------~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~-----~~l~ 146 (163)
.|.+.... .....+.+|+.+.|.|.+.|+|.|.+.|++++..+.......... ..|.
T Consensus 204 ~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~L~ 282 (317)
T 2y25_A 204 AYAEFQRLKQAAIAEKNRARVLGGL-PDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFT 282 (317)
T ss_dssp HHHHHHHHHHHHHHTTTSCEEEEBC-CSEEEEETTSBBCEEEEEECSSCCEEEEEESSSEECCCSSEEECCBTTTEEEEE
T ss_pred cchhhcccCCcccCcCCCCcccccC-CccEEEEcCCEEEEEEEEecCCCCEEEEEECCEeCCCCCcEEEEEcCCCEEEEE
Confidence 12222211 235678899999999999999999999999999886655444321 2899
Q ss_pred EEcchhhhHh
Q psy16425 147 RTKKKKKKKK 156 (163)
Q Consensus 147 i~~v~~~~~~ 156 (163)
|.+++.+|.+
T Consensus 283 i~~v~~~d~G 292 (317)
T 2y25_A 283 INGVSTADSG 292 (317)
T ss_dssp EBSCCSTTCE
T ss_pred ECCCCHHHCE
Confidence 9999999875
No 60
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.74 E-value=3.2e-17 Score=114.23 Aligned_cols=142 Identities=16% Similarity=0.275 Sum_probs=100.0
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCc--eE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMK--SQ 80 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~--~~ 80 (163)
..+.|.|...+.|. .|.|++.++..+. ...++.....+ ...+|.|.+++.+|+|.|+|.+.+.... ..
T Consensus 20 ~~v~l~C~~~~~p~-~v~W~~~~g~~~~--------~~~~~~~~~~~-~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~ 89 (291)
T 2wim_A 20 ESKFFTCTAIGEPE-SIDWYNPQGEKII--------STQRVVVQKEG-VRSRLTIYNANIEDAGIYRCQATDAKGQTQEA 89 (291)
T ss_dssp CCEEEEEEEESCCS-EEECBCTTCCBCC--------CBTTEEEEEET-TEEEEEECSCCGGGCEEEEEEEECSSSCEEEE
T ss_pred CcEEEEEEEeCCCC-ceEEECCCCcCcc--------CCCcEEEecCC-CEEEEEEccCCcccCEEEEEEEecccCceEEE
Confidence 46788898888775 8999995554442 22444444333 3458999999999999999999766333 34
Q ss_pred eEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCce---EEeceEEEEcchhhhHh
Q psy16425 81 VGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQ---EDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 81 ~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~---~~~~~l~i~~v~~~~~~ 156 (163)
...|.+..+|.+...+ ....+.+|+.+.|.|.+.+.|.|.+.|++++..+....... ..++.|.|.+++.+|.+
T Consensus 90 ~~~l~v~~~~~~~~~~--~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G 166 (291)
T 2wim_A 90 TVVLEIYQKLTFREVV--SPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEG 166 (291)
T ss_dssp EEEEEEECCCBCCSCC--CSEEEETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEEECTTSCEEETTCCGGGCE
T ss_pred EEEEEecCCcceEeCC--CChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceEEEccCCCEEEEecchhhCE
Confidence 5567777777665543 35678899999999999999999999999998765422222 14567999999988875
No 61
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.74 E-value=2.3e-17 Score=110.31 Aligned_cols=151 Identities=16% Similarity=0.224 Sum_probs=97.8
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCC-ceEE--eee--eeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCC
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDT-QTIL--TIQ--THVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPM 77 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~-~~~~--~~~--~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~ 77 (163)
.++.|.|...+.|.+.|.|++.+. .... ... ........|+..... .++++|.|.+++.+|+|.|+|.+.+...
T Consensus 17 ~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 95 (213)
T 3d9a_L 17 NSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGS-GTDFTLSINSVETEDFGMYFCQQSNSWP 95 (213)
T ss_dssp CCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEE-TTEEEEEESSCCGGGCEEEEEEECSSSS
T ss_pred CcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcC-CCEEEEEECCCChhhCEEEEEeeecCCc
Confidence 468899999888889999998532 2111 000 000112356666542 3466899999999999999999966532
Q ss_pred c--eEeEEEEEEc---CCcccccCCCCcEEEeCCCcEEEEeEecc-CCCC-eEEEEECCeEEEec-C---Cc-------e
Q psy16425 78 K--SQVGYLEVVV---PPDILDYPTSTDMVIREGSNVTLKCAASG-SPKP-NITWRREGGELIAQ-G---NG-------Q 139 (163)
Q Consensus 78 ~--~~~~~l~v~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p-~v~W~~~~~~~~~~-~---~~-------~ 139 (163)
. .....|.|.. +|.+...+. .....+|+.+.|.|.+.+ .|++ .+.|++++..+... . .. .
T Consensus 96 ~~~~~~~~l~V~~~~~~p~v~~~~~--~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~ 173 (213)
T 3d9a_L 96 YTFGGGTKLEIKRADAAPTVSIFPP--SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTY 173 (213)
T ss_dssp CEECCCEEEEECCCCBCCEEEEECC--CHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEEECCCCTTTCCE
T ss_pred ceeCCCEEEEEecCCCCceeEeECC--ChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceeeecCCCccCCCCCE
Confidence 2 2234566654 444443222 112336889999999987 6665 89999999886433 0 00 0
Q ss_pred EEeceEEEEcchhhhHh
Q psy16425 140 EDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 140 ~~~~~l~i~~v~~~~~~ 156 (163)
.....|.|.++..+|.+
T Consensus 174 ~~~s~L~i~~~~~~d~G 190 (213)
T 3d9a_L 174 SMSSTLTLTKDEYERHN 190 (213)
T ss_dssp EEEEEEEEEHHHHHHCC
T ss_pred EEEEEEEEeccccCCCC
Confidence 12348999999988865
No 62
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.74 E-value=2e-16 Score=111.08 Aligned_cols=140 Identities=16% Similarity=0.270 Sum_probs=98.7
Q ss_pred eeEEEeeee-ccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCC-CceEEEEEcccCCCCCeEEEEEEEeCCCceEe
Q psy16425 4 RMLIEIGEM-LMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSE-TKAWYLHIREVRESDRGWYMCQVNTDPMKSQV 81 (163)
Q Consensus 4 ~~~~~~~~~-~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~ 81 (163)
.+.|.|... +.|.+.+.|++ ++..+. ...++.+.... .+..+|.|.+++.+|+|.|+|.+.+. .....
T Consensus 124 ~v~l~C~~~~~~p~~~v~W~~-~~~~i~--------~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~-~~~~~ 193 (312)
T 2y23_A 124 QVRFWMQAEKLSGNAKVNYIF-NEKEIF--------EGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDG-KATNH 193 (312)
T ss_dssp CEEEEEEESCCCSSCEEEEEE-TTEEEC--------SSSSCEEEEETTTTEEEEEESCCCGGGCEEEEEEEESS-SCEEE
T ss_pred CEEEEEEEEeCCCCCEEEEEE-CCEECe--------eCCcEEEEEccCCCEEEEEEccCCcccCEeEEEEEEeC-CceEE
Confidence 577888888 88999999999 555542 22444444332 34567999999999999999999543 33333
Q ss_pred EEEEEEc---------------------CCcccccCCCCcEEEeCCCcEEEEeEeccCCCC-eEEEEECCeEEEecCCce
Q psy16425 82 GYLEVVV---------------------PPDILDYPTSTDMVIREGSNVTLKCAASGSPKP-NITWRREGGELIAQGNGQ 139 (163)
Q Consensus 82 ~~l~v~~---------------------~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p-~v~W~~~~~~~~~~~~~~ 139 (163)
..+.+.. +|.+... ....+.+|+.+.|.|.+.+.|.| .+.|++++..+.......
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~---~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~g~~~~~~~~~~ 270 (312)
T 2y23_A 194 STVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEY---LSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHD 270 (312)
T ss_dssp EEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEE---EEEEEETTTEEEEEEEEESCCSSCEEEEEETTEEEEEECCC-
T ss_pred EEEEEcchhhhhhcccccccccchhhccCCceeec---ceEEEeCCCEEEEEEEEcCCCCCCEEEEeeCCEECCCCCcEE
Confidence 3344321 1222211 13568899999999999999988 999999999987554444
Q ss_pred E--EeceEEEEcchhhhHh
Q psy16425 140 E--DFPFFKRTKKKKKKKK 156 (163)
Q Consensus 140 ~--~~~~l~i~~v~~~~~~ 156 (163)
. +...|.|.+++.+|.+
T Consensus 271 ~~~~~~~L~I~~v~~~d~G 289 (312)
T 2y23_A 271 FKDGICTLLITEFSKKDAG 289 (312)
T ss_dssp ---CEEEEEECSCSGGGCE
T ss_pred EECCEEEEEECcCCHHHCE
Confidence 3 3368999999999975
No 63
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.74 E-value=5.4e-18 Score=114.36 Aligned_cols=139 Identities=16% Similarity=0.143 Sum_probs=92.5
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceE--EEEEcccCCCCCeEEEEEEEeCCC---
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAW--YLHIREVRESDRGWYMCQVNTDPM--- 77 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~--~L~i~~v~~~d~G~Y~C~~~~~~~--- 77 (163)
..+.|.|...+ +.+.+.|+|. +..+.... .+.. ...... +|.|.+++.+|+|.|+|.+.+...
T Consensus 24 ~~vtL~C~~~~-~~~~~~W~k~-g~~~~~~~-------~~~~---~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~ 91 (218)
T 1uct_A 24 GSVKIQCQAIR-EAYLTQLMII-KNSTYREI-------GRRL---KFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFR 91 (218)
T ss_dssp CCEEEEECCCT-TCSEEEEEEE-ETTEEEEC-------SEEC---C----CCCEEEECSCCGGGCEEEEEEEEETTTEEE
T ss_pred CCEEEEEEcCC-CCCEEEEEEC-CCcccccc-------cccC---CCCcceeeEEEEcccccccCEEEEEEEEcCCCcee
Confidence 46888998876 6889999994 44432110 1100 001123 799999999999999999977532
Q ss_pred ceEeEEEEEEc---CCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceEEeceEEEEcchhhh
Q psy16425 78 KSQVGYLEVVV---PPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQEDFPFFKRTKKKKKK 154 (163)
Q Consensus 78 ~~~~~~l~v~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~l~i~~v~~~~ 154 (163)
.+....|.|.. +|.+...+ ...+.+|+++.|.|.+.+.|.+.+.|+++|..+.........++.|.|.+|+.+|
T Consensus 92 ~s~~~~l~V~~~~~~P~i~~~p---~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~~~~~~~~~~L~I~~v~~~D 168 (218)
T 1uct_A 92 YSDTLELVVTGLYGKPFLSADR---GLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSLGPVDLNV 168 (218)
T ss_dssp ECCCEEEEEECSSCCCEEEESS---CSEECTTCCCEEEEECSSSCCSEEEEEETTCSSCCSEEECSSSEEEECCSCCGGG
T ss_pred ecCCEEEEEcCcccCCEEEeCC---CCccCCCCCEEEEEeCCCCCCCEEEEEECCCcccccccCCCccCEEEEccCCccc
Confidence 22345666654 33343322 3467899999999977777888999999987653311111245679999999998
Q ss_pred Hh
Q psy16425 155 KK 156 (163)
Q Consensus 155 ~~ 156 (163)
++
T Consensus 169 ~G 170 (218)
T 1uct_A 169 SG 170 (218)
T ss_dssp CE
T ss_pred CE
Confidence 76
No 64
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.74 E-value=4.7e-17 Score=113.30 Aligned_cols=140 Identities=16% Similarity=0.162 Sum_probs=101.5
Q ss_pred ceeEEEeeeeccCCCE-EEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCC--Cce
Q psy16425 3 ARMLIEIGEMLMAEST-VAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDP--MKS 79 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~-i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~--~~~ 79 (163)
..+.|.|...+.+.+. +.|++.++..+ ....++.....+ .|.|.+++.+|+|.|+|.+.+.. ..+
T Consensus 105 ~~v~L~C~~~~~~~~~~v~W~~~~~~~~--------~~~~~~~~~~~~----~L~i~~v~~~d~G~Y~C~a~~~~~~~~~ 172 (289)
T 3ejj_X 105 QEAVLPCLITDPALKDSVSLMREGGRQV--------LRKTVYFFSPWR----GFIIRKAKVLDSNTYVCKTMVNGRESTS 172 (289)
T ss_dssp SCEEECEEESCGGGGGSEEEEEGGGEEC--------CTTCCEEEETTT----EEEESSCCGGGCEEEEEEEEETTEEEEC
T ss_pred CceEeEEEccCCCcceEEEEEecCCeec--------CCCccEEECCCC----CEEEeecccccCEEEEEEEEeCCCcccc
Confidence 3578888887777665 99998555443 234455555444 79999999999999999997442 334
Q ss_pred EeEEEEEE----cCCcccccCCCCcEEEeCCCcEEEEeEecc-CCCCeEEEEECCeEEEec------CCceEEeceEEEE
Q psy16425 80 QVGYLEVV----VPPDILDYPTSTDMVIREGSNVTLKCAASG-SPKPNITWRREGGELIAQ------GNGQEDFPFFKRT 148 (163)
Q Consensus 80 ~~~~l~v~----~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p~v~W~~~~~~~~~~------~~~~~~~~~l~i~ 148 (163)
..+.|.|. .+|.+...+ ....+.+|+++.|.|.+.+ .|.|.+.|++++..+... .......+.|.|.
T Consensus 173 ~~~~l~V~~~~~~~p~i~~~~--~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~ 250 (289)
T 3ejj_X 173 TGIWLKVNRVHPEPPQIKLEP--SKLVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLEIPLNSDFQDNYYKKVRALSLN 250 (289)
T ss_dssp CCEEEEEESSCCCCCEEEEES--SSEECCSSSCEEEEEEEEESSSCCEEEEEETTEECCCCEEEEECSSSEEEEEEEEES
T ss_pred ccEEEEEEECCCCCCeEEecC--CceEEEeCCcEEEEEEeCCCCCceEEEEEECCEEeeccCCcccccceEEeeEEEEEE
Confidence 45667776 455555544 2455678999999999998 799999999999876432 2222356789999
Q ss_pred cchhhhHh
Q psy16425 149 KKKKKKKK 156 (163)
Q Consensus 149 ~v~~~~~~ 156 (163)
+++.+|.+
T Consensus 251 ~v~~~d~G 258 (289)
T 3ejj_X 251 AVDFQDAG 258 (289)
T ss_dssp SCCSSSCE
T ss_pred eecccCCE
Confidence 99998865
No 65
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.74 E-value=1.8e-17 Score=110.46 Aligned_cols=148 Identities=18% Similarity=0.272 Sum_probs=98.0
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCC-ceEEEEEcccCCCCCeEEEEEEEeCCCc--e
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSET-KAWYLHIREVRESDRGWYMCQVNTDPMK--S 79 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~L~i~~v~~~d~G~Y~C~~~~~~~~--~ 79 (163)
..+.|.|...+.|.+.|.|++ ++..+..... ....+......+. ....|.|.+++.+|+|.|+|.+.+.... +
T Consensus 25 ~~v~l~C~~~~~p~~~v~W~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~ 100 (212)
T 2v9r_A 25 EPATLNCKAEGRPTPTIEWYK-GGERVETDKD---DPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVS 100 (212)
T ss_dssp CCEEECCEEEEESCCEEEEEE-TTEECCCTTT---CTTCSEEECTTSCEEESSCCCCSSCCCSCEEEEEEEEETTEEEEC
T ss_pred CcEEEEEEcCCCCCCEEEEEE-CCEEeecccc---ccccceEEecCCcEEEEEEEecCCCcccCeEEEEEEECCCCceee
Confidence 467888998889999999999 4544321100 0000111111110 0113456778999999999999765322 3
Q ss_pred EeEEEEEEcCCc-ccccCCCCcEEEeCCCcEEEEeEe-ccCCCCeEEEEECCeEEEecCC-ceEEeceEEEEcchhhhHh
Q psy16425 80 QVGYLEVVVPPD-ILDYPTSTDMVIREGSNVTLKCAA-SGSPKPNITWRREGGELIAQGN-GQEDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 80 ~~~~l~v~~~p~-~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~p~v~W~~~~~~~~~~~~-~~~~~~~l~i~~v~~~~~~ 156 (163)
....|.|...|. +...+ ....+.+|+.+.|.|.+ .+.|.|.+.|++++..+..... ....++.|.|.+++.+|.+
T Consensus 101 ~~~~l~V~~~~~~~~~~~--~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~~~~~~~~~~L~i~~~~~~d~G 178 (212)
T 2v9r_A 101 HDASLEVAILRDDFRQNP--SDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAG 178 (212)
T ss_dssp CCEEEEECEECSSCSBCC--CCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTSTTEEEETTEEEESSCCGGGCE
T ss_pred cceEEEEEeccccceeCC--CceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCcceEEccCCeEEEeeCCHhhCe
Confidence 345666665333 33222 35678899999999998 8899999999999998765432 2346678999999998875
No 66
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.74 E-value=1.1e-16 Score=112.87 Aligned_cols=141 Identities=18% Similarity=0.237 Sum_probs=97.1
Q ss_pred ceeEEEeee------eccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEE-eC
Q psy16425 3 ARMLIEIGE------MLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVN-TD 75 (163)
Q Consensus 3 ~~~~~~~~~------~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~-~~ 75 (163)
.++.|.|.. .+.|.+.|.|++ ++..+.. ...++... .+ .|.|.+++.+|+|.|+|.+. +.
T Consensus 119 ~~v~l~C~~~~~~~~~g~p~~~i~W~k-~~~~l~~-------~~~~~~~~-~~----~L~i~~v~~~d~G~Y~C~a~~n~ 185 (315)
T 1itb_B 119 GDGGLVCPYMEFFKNENNELPKLQWYK-DCKPLLL-------DNIHFSGV-KD----RLIVMNVAEKHRGNYTCHASYTY 185 (315)
T ss_dssp SCEEEECSSCTTTCTTTTCCCCCEEEE-TTEECCC-------CSSSEEEE-TT----EEEESSCCGGGCEEEEEEEEEEE
T ss_pred CCeEEEEecccccccCCCCCCEEEEEE-CCEECCC-------ccceEeec-Cc----eEEEEeceehhCcEEEEEEEcCC
Confidence 357788876 788999999999 5554421 12233222 22 89999999999999999997 44
Q ss_pred CCce----EeEEEEEE-----cCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCce-------
Q psy16425 76 PMKS----QVGYLEVV-----VPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQ------- 139 (163)
Q Consensus 76 ~~~~----~~~~l~v~-----~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~------- 139 (163)
.... ....+.+. .+|.+...+ .....+.+|+.+.|.|.+.|.|.|.+.|++++..+.......
T Consensus 186 ~g~~~~~~~~~~~~~~~~~~~~~P~~~~~~-~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~ 264 (315)
T 1itb_B 186 LGKQYPITRVIEFITLEENKPTRPVIVSPA-NETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSV 264 (315)
T ss_dssp TTEEEEEEEEEEEEEECCCCCCCCEECSCC-SEEEECCSSSCEEEEEEEEECTTSEEEEEETTEECCTTCSSEEEEEEEE
T ss_pred CCcEEEEEEEEEEEEecCCCCCCCEEecCC-CCcEEEeCCCcEEEEEEEecCCCCeeEEEECCEECCcccccccccceee
Confidence 3222 22233333 345444322 223568899999999999999999999999998876543221
Q ss_pred ---------EEeceEEEEcchhhh-Hhh
Q psy16425 140 ---------EDFPFFKRTKKKKKK-KKK 157 (163)
Q Consensus 140 ---------~~~~~l~i~~v~~~~-~~~ 157 (163)
.....|.|.+++.+| ++.
T Consensus 265 ~~~~~~~~~~~~~~L~i~~v~~~d~~G~ 292 (315)
T 1itb_B 265 ENPANKRRSTLITVLNISEIESRFYKHP 292 (315)
T ss_dssp CCSSCGGGEEEEEEEEESSCCGGGGTSC
T ss_pred eccCCCceeEEEEEEEEeecCHHHcCCc
Confidence 123489999999998 653
No 67
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.74 E-value=5.6e-17 Score=108.72 Aligned_cols=129 Identities=17% Similarity=0.308 Sum_probs=85.3
Q ss_pred ceeEEEeeeecc-CCCEEEEEEcC-Cc-e--EEeee-----eeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEE
Q psy16425 3 ARMLIEIGEMLM-AESTVAWLRVD-TQ-T--ILTIQ-----THVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQV 72 (163)
Q Consensus 3 ~~~~~~~~~~~~-~~~~i~W~k~~-~~-~--~~~~~-----~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~ 72 (163)
.++.|.|...+. +.+.|.||+.+ +. . +.... .......+|+.+.. ..++++|.|.+++.+|+|.|.|.+
T Consensus 16 ~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~~ 94 (218)
T 3s96_B 16 ASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSS-SGADRYLSISNIQPEDEAIYICGV 94 (218)
T ss_dssp SCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEE-ETTEEEEEESSCCGGGCEEEEEEE
T ss_pred CcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEec-CCceEEEEEccCCcccCEEEEEEE
Confidence 478999999888 89999999943 11 1 11110 00011235777665 345678999999999999999999
Q ss_pred EeCCC------ceEeEEEEEEc----CCcccccCCCCcEEEeCCCcEEEEeEecc-CCCC-eEEEEECCeEEEe
Q psy16425 73 NTDPM------KSQVGYLEVVV----PPDILDYPTSTDMVIREGSNVTLKCAASG-SPKP-NITWRREGGELIA 134 (163)
Q Consensus 73 ~~~~~------~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p-~v~W~~~~~~~~~ 134 (163)
.+... ......|.|.. +|.+...+. ......|+.+.|.|.+.+ .|.| .+.|++++..+..
T Consensus 95 ~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~--~~~~~~~~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~ 166 (218)
T 3s96_B 95 GDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPP--SSEELKENKATLVCLISNFSPSGVTVAWKANGTPITQ 166 (218)
T ss_dssp EEEETTEEEEEECCCEEEEEESCCCBCCEEEEECC--CHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEC--
T ss_pred ecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCC--CcccccCCcEEEEEEECcccCCCeEEEEEECCEECcC
Confidence 66532 23345677773 344433221 222345789999999987 6777 8999999988754
No 68
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.73 E-value=4.6e-17 Score=107.21 Aligned_cols=138 Identities=13% Similarity=0.072 Sum_probs=92.9
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCC---Cce
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDP---MKS 79 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~---~~~ 79 (163)
.++.|.|...+ +.+.+.|+| ++..+... .... .....+..|.|.+++.+|+|.|+|.+.+.. ..+
T Consensus 19 ~~v~L~C~~~~-~~~~~~w~k-~g~~~~~~------~~~~----~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~s 86 (188)
T 1oll_A 19 KQVTICCQGNY-GAVEYQLHF-EGSLFAVD------RPKP----PERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPS 86 (188)
T ss_dssp CCEEEEEECCT-TCCEEEEEE-TTEEEEEE------CCSS----CTTCCEEEEEESSCCGGGCEEEEEEEEETTEECCCC
T ss_pred CCEEEEEecCC-CCCEEEEEE-CCCccccc------cccc----CCCcceeEEEeCcCCcccCeEEEEEecCCCCCCCCC
Confidence 46888898765 457899999 55544211 0000 011234589999999999999999996642 224
Q ss_pred EeEEEEEEc---CCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceEEeceEEEEcchhhhHh
Q psy16425 80 QVGYLEVVV---PPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQEDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 80 ~~~~l~v~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~l~i~~v~~~~~~ 156 (163)
..+.|.|.. +|.+...+ ...+.+|+++.|.|.+.+ +.+.+.|++++..+.........++.|.|.+|+.+|++
T Consensus 87 ~~~~l~V~~~~~~p~i~~~p---~~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~L~I~~v~~~d~G 162 (188)
T 1oll_A 87 NLLDLVVTEMYDTPTLSVHP---GPEVISGEKVTFYCRLDT-ATSMFLLLKEGRSSHVQRGYGKVQAEFPLGPVTTAHRG 162 (188)
T ss_dssp CCEEEEEESCSCCCEEEEES---CSEEETTCEEEEEEECSS-SCSEEEEEEESSSCEEEEEECSSEEEEEEEECCGGGCE
T ss_pred CceEEEecccCCCCeEEECC---CCccccCCEEEEEEEcCC-CCCEEEEEECCccccccccCCCceeEEEECCCCcCCCc
Confidence 455676664 34444322 345789999999999876 45789999998765432111124578999999999976
No 69
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.73 E-value=2.2e-17 Score=109.25 Aligned_cols=138 Identities=14% Similarity=0.092 Sum_probs=93.3
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCC---ce
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPM---KS 79 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~---~~ 79 (163)
..+.|.|...+ +.+.+.|+| ++..+.... ...........|.|.+++.+|+|.|+|.+.+... .+
T Consensus 20 ~~v~L~C~~~~-~~~~~~w~k-~g~~~~~~~----------~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s 87 (196)
T 3p2t_A 20 NSVTIWCQGTL-EAREYRLDK-EESPAPWDR----------QNPLEPKNKARFSIPSMTEDYAGRYRCYYRSPVGWSQPS 87 (196)
T ss_dssp CCEEEEEECCT-TCCEEEEEE-TTSCSCSEE----------ECCCSSSSEEEEEESSCCGGGCEEEEEEEEETTEEBCCC
T ss_pred CcEEEEeeCCC-CCCEEEEEE-CCCCCcccc----------cccccCCceEEEEeccCCcccCceEEEEEeCCCcccCCC
Confidence 46888898887 778999999 444331110 0000112234899999999999999999977632 24
Q ss_pred EeEEEEEEc---CCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCc-----eEEeceEEEEcch
Q psy16425 80 QVGYLEVVV---PPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNG-----QEDFPFFKRTKKK 151 (163)
Q Consensus 80 ~~~~l~v~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~-----~~~~~~l~i~~v~ 151 (163)
..+.|.|.. +|.+...+ ...+.+|+.+.|.|.+.+ +++.+.|++++..+...... ....+.|.|.+|+
T Consensus 88 ~~~~l~V~~~~~~p~~~~~~---~~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~ 163 (196)
T 3p2t_A 88 DPLELVMTGAYSKPTLSALP---SPLVTSGKSVTLLCQSRS-PMDTFLLCKERAAHPLLCLRSEHGAQQHQAEFPMSPVT 163 (196)
T ss_dssp CCEEEEEECSSCCCEEEEES---CSEECTTCCEEEEEEEEE-EEEEEEEEETTCCCGGGSEEEEEEEEEEEEEEEECSCC
T ss_pred ccEEEEecCCCCCCEEEeCC---cceecCCCeEEEEEecCC-CCCEEEEEeCCCcccceeecccccccCcceEEEeCCCc
Confidence 455666654 23333322 236789999999999987 45689999998765322111 1255789999999
Q ss_pred hhhHh
Q psy16425 152 KKKKK 156 (163)
Q Consensus 152 ~~~~~ 156 (163)
.+|++
T Consensus 164 ~~d~G 168 (196)
T 3p2t_A 164 SVHGG 168 (196)
T ss_dssp GGGCE
T ss_pred ccCCC
Confidence 99976
No 70
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.73 E-value=3.6e-16 Score=106.18 Aligned_cols=151 Identities=14% Similarity=0.174 Sum_probs=97.7
Q ss_pred ceeEEEeeeeccCCCEEEEEEcC-CceEEee---e-e---eEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVD-TQTILTI---Q-T---HVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNT 74 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~-~~~~~~~---~-~---~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~ 74 (163)
.++.|.|. .+.|.+.|.|++.+ +...... . . .......|+.+.......++|.|.+++.+|+|.|.|.+.+
T Consensus 16 ~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 94 (238)
T 2p1y_A 16 GKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELATPSQTSVYFCASGD 94 (238)
T ss_dssp CCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEC
T ss_pred CEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCCcccCeeEEEEEEe
Confidence 46788888 77889999999952 2111110 0 0 0011245677665444567899999999999999999965
Q ss_pred CCC------ceEeEEEEEEcCCc------------ccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCe-----E
Q psy16425 75 DPM------KSQVGYLEVVVPPD------------ILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGG-----E 131 (163)
Q Consensus 75 ~~~------~~~~~~l~v~~~p~------------~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~-----~ 131 (163)
... ......|.|...+. +...+ ....+.+|+++.|.|.+.+.|.|.+.|++++. .
T Consensus 95 ~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p--~~~~v~~G~~v~L~C~~~~~p~~~i~W~k~~~~~~~~~ 172 (238)
T 2p1y_A 95 LGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSP--QSLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPAL 172 (238)
T ss_dssp ------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEEC--SEEEEETTSCEEEEEECCCTTCCEEEEEEECTTSCCEE
T ss_pred CCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccC--ceEEEeCCCeEEEEEEEecCCCCcEEEEEECCCCCCEE
Confidence 421 11334677765543 22222 35678899999999999999999999998641 1
Q ss_pred EE---------ecCCceEE------eceEEEEcchhhhHh
Q psy16425 132 LI---------AQGNGQED------FPFFKRTKKKKKKKK 156 (163)
Q Consensus 132 ~~---------~~~~~~~~------~~~l~i~~v~~~~~~ 156 (163)
+. ...+.... ...|+|.+++.+|++
T Consensus 173 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G 212 (238)
T 2p1y_A 173 LISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSA 212 (238)
T ss_dssp EEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCE
T ss_pred EEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCE
Confidence 11 11222111 257999999999875
No 71
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.73 E-value=1.9e-17 Score=110.89 Aligned_cols=146 Identities=21% Similarity=0.348 Sum_probs=97.8
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCc--eE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMK--SQ 80 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~--~~ 80 (163)
..+.|.|...+.|.+.|.|++ ++..+.... ....++.. ..+.....|.|.+++.+|+|.|+|.+.+.... +.
T Consensus 25 ~~v~L~C~~~g~p~~~v~W~~-~g~~~~~~~----~~~~~~~~-~~~~~~~~l~i~~v~~~d~G~Y~C~~~n~~g~~~~~ 98 (217)
T 2vr9_A 25 EPATLNCKVEGKPEPTIEWFK-DGEPVSTNE----KKSHRVQF-KDGALFFYRTMQGKKEQDGGEYWCVAKNRVGQAVSR 98 (217)
T ss_dssp SCEEECCEEECSSCCEEEEEE-TTEECCCSS----SSSSEEEC-TTSCEEESSCCBSSSCBCCEEEEEEEEETTEEEECC
T ss_pred CcEEEEEEcCCCCCCeEEEEE-CCcCccCCC----ccceeEEe-cCCceEEEEEeccCCcccCceEEEEEecCCCccccc
Confidence 367888998888999999999 555442110 00112211 11111123368999999999999999765332 23
Q ss_pred eEEEEEEc-CCcccccCCCCcEEEeCCCcEEEEeEe-ccCCCCeEEEEECCeEEEecC--------Cce-EEeceEEEEc
Q psy16425 81 VGYLEVVV-PPDILDYPTSTDMVIREGSNVTLKCAA-SGSPKPNITWRREGGELIAQG--------NGQ-EDFPFFKRTK 149 (163)
Q Consensus 81 ~~~l~v~~-~p~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~p~v~W~~~~~~~~~~~--------~~~-~~~~~l~i~~ 149 (163)
...+.+.+ +|.+...+ ....+.+|+.+.|.|.+ .+.|.|.+.|++++..+.... ... ..++.|.|.+
T Consensus 99 ~~~l~v~~~~~~~~~~~--~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~ 176 (217)
T 2vr9_A 99 HASLQIAVLRDDFRVEP--KDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRIVDGGNLLISN 176 (217)
T ss_dssp CEEEEECEECCSCSBCC--CCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---CCCSEEEETTTEEEESS
T ss_pred cceEEEEEeCCCcEECC--CccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccccCCcEEecCCCcEEEee
Confidence 45666655 34444333 35678899999999999 899999999999998876321 111 2446899999
Q ss_pred chhhhHh
Q psy16425 150 KKKKKKK 156 (163)
Q Consensus 150 v~~~~~~ 156 (163)
++.+|.+
T Consensus 177 ~~~~d~G 183 (217)
T 2vr9_A 177 VEPIDEG 183 (217)
T ss_dssp CCSTTCE
T ss_pred CCHHHCe
Confidence 9998875
No 72
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.73 E-value=5.7e-17 Score=108.28 Aligned_cols=149 Identities=15% Similarity=0.227 Sum_probs=95.6
Q ss_pred ceeEEEeeeeccCCCEEEEEEcC-CceEE-ee---eeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCC
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVD-TQTIL-TI---QTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPM 77 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~-~~~~~-~~---~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~ 77 (163)
.++.|.|... +.+.|.||+.+ +.... .. ........+|+.... ..++++|.|.+++.+|+|.|+|.+.+...
T Consensus 16 ~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 92 (211)
T 3tv3_L 16 QSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSK-SGNTASLTVSGLQTDDEAVYYCGSLVGNW 92 (211)
T ss_dssp CEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEE-ETTEEEEEEESCCGGGCEEEEEEEEETTT
T ss_pred CCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEc-cCCEEEEEECCCChhHCEEEEEEEecCCC
Confidence 4688888887 88999999942 21111 00 000011335666554 33567899999999999999999977643
Q ss_pred ---ceEeEEEEEE----cCCcccccCCCCcEEEeCCCcEEEEeEeccC--CCCeEEEEECCeEEEec----------CCc
Q psy16425 78 ---KSQVGYLEVV----VPPDILDYPTSTDMVIREGSNVTLKCAASGS--PKPNITWRREGGELIAQ----------GNG 138 (163)
Q Consensus 78 ---~~~~~~l~v~----~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~--p~p~v~W~~~~~~~~~~----------~~~ 138 (163)
......|.|. .+|.+...+. ...+.+|+.+.|.|.+.+. |.+.+.|++++..+... ...
T Consensus 93 ~~~~~~~~~l~V~~~~~~~P~v~~~~~--~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~ 170 (211)
T 3tv3_L 93 DVIFGGGTKLTVLGQPKAAPSVTLFPP--SSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNK 170 (211)
T ss_dssp EEEECCCEEEEECCSCCBCCEEEEECC--CHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEECTTSS
T ss_pred ceeECCCceEEEeCCCCcCCeeEecCC--chhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCCCcccCCceECCCCC
Confidence 3344567776 4555544332 1223369999999999885 35789999999887421 011
Q ss_pred eEEeceEEEEcchhhhHh
Q psy16425 139 QEDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 139 ~~~~~~l~i~~v~~~~~~ 156 (163)
......|.|..+..+|.+
T Consensus 171 ~~~~s~L~i~~~~~~d~g 188 (211)
T 3tv3_L 171 YAASSYLSLTPEQWKSHR 188 (211)
T ss_dssp EEEEEEEEECHHHHHHSS
T ss_pred EEEEEEEEEcHHHhCCCC
Confidence 112356788888777654
No 73
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.73 E-value=4.5e-17 Score=108.78 Aligned_cols=151 Identities=17% Similarity=0.221 Sum_probs=96.2
Q ss_pred ceeEEEeeeeccCCCEEEEEEcC-CceE--Eeee--eeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCC
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVD-TQTI--LTIQ--THVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPM 77 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~-~~~~--~~~~--~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~ 77 (163)
.++.|.|...+.|.+.|.||+.+ +..+ .... ........|+.... ..++++|.|.+++.+|+|.|.|.+.+...
T Consensus 16 ~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 94 (210)
T 1lk3_L 16 EKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSG-SGTDFTLTIDPVEADDTAIYFCQQSWNGP 94 (210)
T ss_dssp SCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ETTEEEEEESSCCGGGCEEEEEEECSSSS
T ss_pred CCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEe-cCCEEEEEECCCCHHHCeEEEEEEEcCCC
Confidence 46889999988888999999953 2211 1100 00001235666554 23466899999999999999999966532
Q ss_pred c--eEeEEEEEEc---CCcccccCCCCcEEEeCCCcEEEEeEecc-CCCC-eEEEEECCeEEEec----CCc-------e
Q psy16425 78 K--SQVGYLEVVV---PPDILDYPTSTDMVIREGSNVTLKCAASG-SPKP-NITWRREGGELIAQ----GNG-------Q 139 (163)
Q Consensus 78 ~--~~~~~l~v~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p-~v~W~~~~~~~~~~----~~~-------~ 139 (163)
. .....|.|.. +|.+...+.. ....+|+.+.|.|.+.| .|++ .+.|++++..+... ... .
T Consensus 95 ~~~~~~~~l~V~~~~~~P~v~~~~~~--~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~ 172 (210)
T 1lk3_L 95 LTFGAGTKLELKRADAAPTVSIFPPS--TEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQDSKDSTY 172 (210)
T ss_dssp CEECCCEEEEECCCCBCCEEEEECCC--HHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEECCCCTTTCCE
T ss_pred ceeCCCEEEEEcCCCcCCeEEEECCc--hhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEccCCccCCCCCE
Confidence 2 2234566654 3444432221 12347899999999987 5554 89999999876433 000 0
Q ss_pred EEeceEEEEcchhhhHh
Q psy16425 140 EDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 140 ~~~~~l~i~~v~~~~~~ 156 (163)
.....|.|.++..+|++
T Consensus 173 ~~~s~L~i~~~~~~d~G 189 (210)
T 1lk3_L 173 SMSSTLSLTKADYESHN 189 (210)
T ss_dssp EEEEEEEEEHHHHHTCC
T ss_pred EEEEEEEEChHHhccCC
Confidence 12236899999888765
No 74
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.72 E-value=2.9e-16 Score=117.91 Aligned_cols=148 Identities=20% Similarity=0.241 Sum_probs=105.2
Q ss_pred ceeEEEeeeeccCCCE-EEEEEcCCce-EEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCce
Q psy16425 3 ARMLIEIGEMLMAEST-VAWLRVDTQT-ILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKS 79 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~-i~W~k~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~ 79 (163)
..+.|.|...+.|.+. |.|++.+... +.......+....... ....|.|.+++.+|+|.|+|.+.+. +...
T Consensus 227 ~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~------~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~ 300 (524)
T 2ec8_A 227 EEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYE------RQATLTISSARVNDSGVFMCYANNTFGSAN 300 (524)
T ss_dssp SCEEEEEEEEESSTTCEEEEEETTCSCCCCEEEEEEECSSSCEE------EEEEEEESSCCTTTCEEEEEEEECSSCEEE
T ss_pred CcEEEEEEEecCCCcEEEEEEeCCCCCccccccccccccCCccc------eEEEEEECCCCHHHCEEEEEEEEecCCceE
Confidence 3678889988888887 9999954331 2111111111111111 2348999999999999999999765 4445
Q ss_pred EeEEEEEEcCCcccccCC-CCcEEEeCCCcEEEEeEeccCCCCe-EEEEECCeEEEecCCce---------EEeceEEEE
Q psy16425 80 QVGYLEVVVPPDILDYPT-STDMVIREGSNVTLKCAASGSPKPN-ITWRREGGELIAQGNGQ---------EDFPFFKRT 148 (163)
Q Consensus 80 ~~~~l~v~~~p~~~~~~~-~~~~~~~~g~~~~l~C~~~~~p~p~-v~W~~~~~~~~~~~~~~---------~~~~~l~i~ 148 (163)
..+.|.|..+|.+...+. .....+.+|+++.|.|.+.|+|.|. +.|++++..+....... .....|.|.
T Consensus 301 ~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~ 380 (524)
T 2ec8_A 301 VTTTLEVVDKGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLT 380 (524)
T ss_dssp EEEEEEEESSCEEEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEEESSSCBCSSSBCCEESCCSSSCCEEEEEEEEC
T ss_pred EEEEEEEeccCceEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEEEECCeeccCCccceeEEccCCCceeEEEEEEe
Confidence 567788888887765442 2357789999999999999999999 99999998765443111 134689999
Q ss_pred cchhhhHh
Q psy16425 149 KKKKKKKK 156 (163)
Q Consensus 149 ~v~~~~~~ 156 (163)
+++.+|.+
T Consensus 381 ~v~~~d~G 388 (524)
T 2ec8_A 381 RLKGTEGG 388 (524)
T ss_dssp SCCGGGCE
T ss_pred ecCcccCe
Confidence 99999876
No 75
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.72 E-value=1.4e-16 Score=109.85 Aligned_cols=152 Identities=12% Similarity=0.131 Sum_probs=100.4
Q ss_pred ceeEEEeeeeccC--CCEEEEEEcC-CceEE---eee------eeEEecCCeEEEEeCC-CceEEEEEcccCCCCCeEEE
Q psy16425 3 ARMLIEIGEMLMA--ESTVAWLRVD-TQTIL---TIQ------THVITKNHRIGVTHSE-TKAWYLHIREVRESDRGWYM 69 (163)
Q Consensus 3 ~~~~~~~~~~~~~--~~~i~W~k~~-~~~~~---~~~------~~~~~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~ 69 (163)
..+.|.|...+.+ .+.|.|++.+ +..+. ... .......+|+.+.... .++++|.|.+++++|+|.|.
T Consensus 16 ~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~ 95 (256)
T 1nqb_A 16 ASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSLTSEDSAVYY 95 (256)
T ss_dssp CCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEE
T ss_pred CcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECcCChhhCEEEE
Confidence 4688889887664 6899999953 22221 100 0001234677776543 45679999999999999999
Q ss_pred EEEEeCCC------ceEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCC-----eEEEEE--CCeEEEe--
Q psy16425 70 CQVNTDPM------KSQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKP-----NITWRR--EGGELIA-- 134 (163)
Q Consensus 70 C~~~~~~~------~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p-----~v~W~~--~~~~~~~-- 134 (163)
|.+.+... ......|.|...|.+...+ ....+.+|+++.|.|.+.+.|.+ .+.|++ ++..+..
T Consensus 96 C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~~p--~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~ 173 (256)
T 1nqb_A 96 CARYDYYGSSYFDYWGQGTTVTVSSDIELTQTP--LSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLI 173 (256)
T ss_dssp EEECCTTSSSSCSEECCCEEEEECCCCCEEEEC--SEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEE
T ss_pred EEEeeccCccceeEEcCceeeeecccccEEecC--cEEEEecCCcEEEEeEecCcccccccceEEEEEEECCCCCcEEEE
Confidence 99976521 1123566776666554433 35678899999999999998765 899999 5554321
Q ss_pred ----------cCCceE----EeceEEEEcchhhhHh
Q psy16425 135 ----------QGNGQE----DFPFFKRTKKKKKKKK 156 (163)
Q Consensus 135 ----------~~~~~~----~~~~l~i~~v~~~~~~ 156 (163)
..+... ....|+|.+++.+|.+
T Consensus 174 ~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG 209 (256)
T 1nqb_A 174 YKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLG 209 (256)
T ss_dssp ETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred EEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCE
Confidence 111111 2246999999999875
No 76
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.72 E-value=1.1e-16 Score=111.68 Aligned_cols=139 Identities=13% Similarity=0.154 Sum_probs=99.8
Q ss_pred ceeEEEeeeeccCC-CEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCe-EEEEEEEeCCCc--
Q psy16425 3 ARMLIEIGEMLMAE-STVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRG-WYMCQVNTDPMK-- 78 (163)
Q Consensus 3 ~~~~~~~~~~~~~~-~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G-~Y~C~~~~~~~~-- 78 (163)
..+.|.|...+ |. +.|.|++.++..+ ....++.....+ .|.|.+++.+|+| .|+|.+.+....
T Consensus 107 ~~v~l~C~~~~-p~~~~v~W~~~~g~~l--------~~~~~~~~~~~~----~L~i~~v~~~d~G~~Y~C~a~n~~~~~~ 173 (290)
T 2o26_X 107 SDALVRCPLTD-PQVSQYSLIECDGKSL--------PTDLTFVPNPKA----GITIKNVKRAYHRLCVRCAAQRDGTWLH 173 (290)
T ss_dssp SCEEECCCBSC-CSCEEEEEEETTSCCC--------CTTCEEEEETTT----EEEEESCCGGGTTCEEEEEEEETTEEEE
T ss_pred CeEEEeCcCCC-CCCceEEEEeCCCcCC--------CCCCceeeCCCC----CEEEecccHHHCCCEEEEEEEECCceEE
Confidence 35778888775 77 9999976566554 223444444443 7999999999999 999999876433
Q ss_pred eEeEEEEEE----cCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCe-EEEEECCeEE----EecCC-------ceEEe
Q psy16425 79 SQVGYLEVV----VPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPN-ITWRREGGEL----IAQGN-------GQEDF 142 (163)
Q Consensus 79 ~~~~~l~v~----~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~-v~W~~~~~~~----~~~~~-------~~~~~ 142 (163)
+..+.|.|. .+|.+...+. ...+.+|+.+.|.|.+.+.|.|. +.|++++..+ ..... .....
T Consensus 174 s~~~~l~V~~~~~~~P~i~~~~~--~~~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (290)
T 2o26_X 174 SDKFTLKVREAIKAIPVVSVPET--SHLLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQ 251 (290)
T ss_dssp CCCEEEEEECCCCSCCEEECSCS--BCCCCTTCCEEEEEEEEESSTTCEEEEEEESSSEEECCCEECCEEEEETTEEEEE
T ss_pred eEEEEEEEEeCCCCCCccccCCC--cceEecCCcEEEEEEEecCCcceeEEEecCCCCCccceeecccccccCceeeEEE
Confidence 234567766 5566554332 34688999999999999999996 9999998773 11111 12345
Q ss_pred ceEEEEcchhhhHh
Q psy16425 143 PFFKRTKKKKKKKK 156 (163)
Q Consensus 143 ~~l~i~~v~~~~~~ 156 (163)
+.|.|.+++.+|.+
T Consensus 252 ~~L~I~~v~~~d~G 265 (290)
T 2o26_X 252 ETLTISSARVDDSG 265 (290)
T ss_dssp EEEEESSCCSSSCE
T ss_pred EEEEEcCCCcccCe
Confidence 78999999998875
No 77
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.72 E-value=1.3e-16 Score=105.54 Aligned_cols=137 Identities=14% Similarity=0.257 Sum_probs=85.3
Q ss_pred ceeEEEeeeec-cCCCEEEEEEcCCceEEeeee-e---------EEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEE
Q psy16425 3 ARMLIEIGEML-MAESTVAWLRVDTQTILTIQT-H---------VITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQ 71 (163)
Q Consensus 3 ~~~~~~~~~~~-~~~~~i~W~k~~~~~~~~~~~-~---------~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 71 (163)
.++.|.|...+ .+.+.|.|++. +..+..... . .....+|+.+.. +++|.|.+++.+|+|.|.|.
T Consensus 14 ~~v~L~C~~~~~~~~~~v~W~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~----~~sL~I~~v~~~D~G~Y~C~ 88 (193)
T 2if7_A 14 ESVTLPLEFPAGEKVNFITWLFN-ETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQ----SYSLQLSNLKMEDTGSYRAQ 88 (193)
T ss_dssp SCEEECCCCCCCSCCCEEEEEET-TEEEEEEECCSSSCCEEEECCHHHHTTEEECT----TCCEEECSCCGGGCEEEEEE
T ss_pred CeEEEeccCCCcccccEEEEEEC-CEEEEEEecccCCCCceeecCccccccEEECC----CeEEEECCCCcccCceEEEE
Confidence 46888888765 45579999994 443322111 0 001124666653 34899999999999999999
Q ss_pred EEeCCC-ceEeEEEEEEcCCcccccCCCCcEEEeCCC-cEEEEeEeccC-CCCeEEEEECCeEEEecCCceEEeceEEEE
Q psy16425 72 VNTDPM-KSQVGYLEVVVPPDILDYPTSTDMVIREGS-NVTLKCAASGS-PKPNITWRREGGELIAQGNGQEDFPFFKRT 148 (163)
Q Consensus 72 ~~~~~~-~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~-~~~l~C~~~~~-p~p~v~W~~~~~~~~~~~~~~~~~~~l~i~ 148 (163)
+.+... ....+.|.|..++........ ......|. .+.|.|.+.+. |.|.+.|++++..+.. +..|+|.
T Consensus 89 ~~~~~~~~~~~~~L~V~~~~~~p~i~~~-~~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l~~-------~~~l~i~ 160 (193)
T 2if7_A 89 ISTKTSAKLSSYTLRILRQLRNIQVTNH-SQLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLSS-------QPNLTVS 160 (193)
T ss_dssp EECSSCEEEEEEEEEEECCCEEEEEEEC-CC---CSSEEEEEEEEEESCCTTCEEEEEETTEEEES-------SSEEEEE
T ss_pred EEecCCCeEEEEEEEEEccCCCCeEecC-ceeecCCCceEEEEEEEecCCCceEEEEEeCCEEcCC-------CCeEEEE
Confidence 976532 334566777665432221111 11233455 79999999985 5889999999876532 2346665
Q ss_pred cchh
Q psy16425 149 KKKK 152 (163)
Q Consensus 149 ~v~~ 152 (163)
...+
T Consensus 161 ~~~~ 164 (193)
T 2if7_A 161 WDPR 164 (193)
T ss_dssp ECTT
T ss_pred eccC
Confidence 4444
No 78
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.72 E-value=4.1e-16 Score=106.52 Aligned_cols=152 Identities=15% Similarity=0.249 Sum_probs=98.5
Q ss_pred ceeEEEeeeeccC--CCEEEEEEcCC-ceEEee---e------eeEEecCCeEEEEeCC-CceEEEEEcccCCCCCeEEE
Q psy16425 3 ARMLIEIGEMLMA--ESTVAWLRVDT-QTILTI---Q------THVITKNHRIGVTHSE-TKAWYLHIREVRESDRGWYM 69 (163)
Q Consensus 3 ~~~~~~~~~~~~~--~~~i~W~k~~~-~~~~~~---~------~~~~~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~ 69 (163)
.++.|.|...+.| .+.|.|++.+. ...... . .......+|+.+.... .+.++|.|.+++.+|+|.|.
T Consensus 18 ~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 97 (247)
T 2ghw_B 18 KSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYY 97 (247)
T ss_dssp CCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSCCGGGCEEEE
T ss_pred CcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcCCHHHCEEEE
Confidence 4688899988776 68899999532 111100 0 0001234677776543 45679999999999999999
Q ss_pred EEEEeCC-C--ceEeEEEEEEcCC---------------cccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEE--CC
Q psy16425 70 CQVNTDP-M--KSQVGYLEVVVPP---------------DILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRR--EG 129 (163)
Q Consensus 70 C~~~~~~-~--~~~~~~l~v~~~p---------------~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~--~~ 129 (163)
|.+.+.. . ......|.|...+ .+...+ ....+.+|+++.|.|.+.+.|.|.+.|++ ++
T Consensus 98 C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g 175 (247)
T 2ghw_B 98 CARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSP--ATLSLSPGERATLSCRASQSVRSNLAWYQQKPG 175 (247)
T ss_dssp EEEEETTEEEEECCCEEEEECSCC------------CCCCEEEEC--SEEEECTTSCEEEEEEESSCCTTCEEEEEECTT
T ss_pred EeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccC--CEEEecCCCcEEEEEEeCCCccceEEEEEECCC
Confidence 9997651 1 1223466666542 122212 35568899999999999999999999998 45
Q ss_pred eEEEe------------cCCce----EEeceEEEEcchhhhHh
Q psy16425 130 GELIA------------QGNGQ----EDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 130 ~~~~~------------~~~~~----~~~~~l~i~~v~~~~~~ 156 (163)
..+.. ..+.. .....|+|.+++.+|.+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 218 (247)
T 2ghw_B 176 QAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFA 218 (247)
T ss_dssp SCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCE
T ss_pred CCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCE
Confidence 43311 01111 12346999999999875
No 79
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.72 E-value=5.6e-17 Score=105.59 Aligned_cols=126 Identities=18% Similarity=0.203 Sum_probs=91.1
Q ss_pred ceeEEEeeeeccCCC-EEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCceEe
Q psy16425 3 ARMLIEIGEMLMAES-TVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~-~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~ 81 (163)
..+.|.|...+.+.+ .+.|++ ++..+. . .+.+|.|.+++.+|+|.|+|.+.+ ...+..
T Consensus 20 ~~v~L~C~~~~~~~~~~i~W~~-~~~~~~--------~-----------~~~~L~i~~v~~~d~G~Y~C~~~~-~~~s~~ 78 (176)
T 1f2q_A 20 ENVTLTCNGNNFFEVSSTKWFH-NGSLSE--------E-----------TNSSLNIVNAKFEDSGEYKCQHQQ-VNESEP 78 (176)
T ss_dssp CCEEEECCTTCC----CCEEEE-TTEECS--------C-----------CSSEEEECSCCGGGCEEEEEECTT-SSCCCC
T ss_pred CcEEEEEeCCCCCCcceEEEEE-CCeECC--------C-----------CceEEEEeccceecCEEEEEEcCC-cccccc
Confidence 367889988888775 699999 554331 0 123899999999999999999954 334556
Q ss_pred EEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEec-cCCCCeEEEEECCeEEEecCCceEEeceEEEEcchhhhHh
Q psy16425 82 GYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAAS-GSPKPNITWRREGGELIAQGNGQEDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 82 ~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~-~~p~p~v~W~~~~~~~~~~~~~~~~~~~l~i~~v~~~~~~ 156 (163)
+.|.|..++.....+ ...+.+|+.+.|.|.+. +.|.+.+.|++++..+.. ...++.|.|.+++.+|.+
T Consensus 79 ~~l~V~~~~~~~~~~---~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~----~~~~~~L~i~~v~~~d~G 147 (176)
T 1f2q_A 79 VYLEVFSDWLLLQAS---AEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKY----WYENHNISITNATVEDSG 147 (176)
T ss_dssp EEEEEECSSEEEEES---CSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCS----CCCSSEEEESSCCGGGCE
T ss_pred EEEEEeCcceeecCC---cceeeCCCCEEEEEEecCCCCceEEEEEECCEEEee----ecCCCeEEECCCCcccCE
Confidence 677777554444332 34677999999999995 677789999999987732 234567999999998875
No 80
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.72 E-value=2.2e-16 Score=105.13 Aligned_cols=154 Identities=21% Similarity=0.234 Sum_probs=98.7
Q ss_pred cceeEEEeeeeccCCC---EEEEEEcCCceEEee-----e--eeE--EecCCeEEEEeCC--CceEEEEEcccCCCCCeE
Q psy16425 2 AARMLIEIGEMLMAES---TVAWLRVDTQTILTI-----Q--THV--ITKNHRIGVTHSE--TKAWYLHIREVRESDRGW 67 (163)
Q Consensus 2 ~~~~~~~~~~~~~~~~---~i~W~k~~~~~~~~~-----~--~~~--~~~~~r~~~~~~~--~~~~~L~i~~v~~~d~G~ 67 (163)
..++.|.|...+.|.+ .|.|+|.+....... . ... ....+|+.+.... ..+++|.|.+++.+|+|.
T Consensus 14 G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D~G~ 93 (218)
T 4frw_A 14 GQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRNAVQADEGE 93 (218)
T ss_dssp TSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEESSCCGGGCEE
T ss_pred CCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEeeccHHHCCc
Confidence 3468889988777765 489999543221100 0 000 0123444443332 245689999999999999
Q ss_pred EEEEEEeCCCce--EeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCce-----E
Q psy16425 68 YMCQVNTDPMKS--QVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQ-----E 140 (163)
Q Consensus 68 Y~C~~~~~~~~~--~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~-----~ 140 (163)
|.|.+.+..... ....+.+..++...... .....+.+|..+.+.|.+.+.|+|.++|++++..+....... .
T Consensus 94 Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~ 172 (218)
T 4frw_A 94 YECRVSTFPAGSFQARLRLRVLVPPLPSLNP-GPALEEGQGLTLAASCTAEGSPAPSVTWDTEVKGTTSSRSFKHSRSAA 172 (218)
T ss_dssp EEEEEEEETTEEEEEEEEEEEEBCCCCEEEE-CSCEETTCCSEEEEEEEEEEBSCCEEEEEESSCCEEEEEEEECSSSEE
T ss_pred eeEEEEeccCceeeeEEEEEEeeeccceeee-eeeeeeeeccccceeeeccCCcCceEEEEECCcccccCceEecCCcEE
Confidence 999996653322 22334444443332222 235567788999999999999999999999988765443222 2
Q ss_pred EeceEEEEcchhhhHh
Q psy16425 141 DFPFFKRTKKKKKKKK 156 (163)
Q Consensus 141 ~~~~l~i~~v~~~~~~ 156 (163)
..+.|+|.++..+|++
T Consensus 173 ~~s~L~i~~~~~~d~g 188 (218)
T 4frw_A 173 VTSEFHLVPSRSMNGQ 188 (218)
T ss_dssp EEEEEEECCCGGGTTC
T ss_pred EEEEEEEeeCCHHhCe
Confidence 3457999999998875
No 81
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.72 E-value=4e-17 Score=109.44 Aligned_cols=140 Identities=13% Similarity=0.178 Sum_probs=89.4
Q ss_pred ceeEEEeeeeccCCCEEEEEEc--CCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCceE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRV--DTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKSQ 80 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~--~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~ 80 (163)
.++.|.|...+ |.+.+.|++. ++..+ ....++...... .|.|.+++.+|+|.|+|.+.+.+....
T Consensus 25 ~~v~L~C~~~~-p~~~v~w~~~~~~g~~~--------~~~~~~~~~~~~----~l~I~~v~~~D~G~Y~C~a~n~~~~~~ 91 (213)
T 2x1w_L 25 KTVVIPCLGSI-SNLNVSLCARYPEKRFV--------PDGNRISWDSKK----GFTIPSYMISYAGMVFCEAKINDESYQ 91 (213)
T ss_dssp CEEEECCCBSS-TTCCEEEEEETTTEEEC--------CCSSSCEEETTT----EEEEEGGGTTTCSEEEEEEC----CEE
T ss_pred ccEEEeeccCC-CCcEEEEEhhcCCCccc--------cCCCcccccCCc----cEEEccCChhcCceEEEEEEECCeeEE
Confidence 57888888865 7799999984 34332 111233333322 799999999999999999966533322
Q ss_pred --eEEEEEEc--CCcccccCCCCcEEEeCCCcEEEEeEeccCC--CCeEEEEECCeEEEe------c-CC-c----eEEe
Q psy16425 81 --VGYLEVVV--PPDILDYPTSTDMVIREGSNVTLKCAASGSP--KPNITWRREGGELIA------Q-GN-G----QEDF 142 (163)
Q Consensus 81 --~~~l~v~~--~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p--~p~v~W~~~~~~~~~------~-~~-~----~~~~ 142 (163)
...|.+.. +|.+...+. ....+.+|+++.|.|.+.+.| .+.+.|++++..+.. . .. . ....
T Consensus 92 s~~~~l~v~~~~~p~~~~~~~-~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (213)
T 2x1w_L 92 SIMYIVVVVGYRIYDVVLSPS-HGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFL 170 (213)
T ss_dssp CCCEEEEECBCCEEEEEEESC-SCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEEEE
T ss_pred EEEEEEEEeCCcccceEEcCC-CCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCccceeee
Confidence 24555533 222333232 245788999999999999865 457999998875211 1 00 0 2234
Q ss_pred ceEEEEcchhhhHh
Q psy16425 143 PFFKRTKKKKKKKK 156 (163)
Q Consensus 143 ~~l~i~~v~~~~~~ 156 (163)
..|+|.+++.+|.+
T Consensus 171 ~~L~I~~v~~~D~G 184 (213)
T 2x1w_L 171 STLTIDGVTRSDQG 184 (213)
T ss_dssp EEEEESSCCGGGCE
T ss_pred EEEEECCCCcccCE
Confidence 57999999999875
No 82
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.72 E-value=2.9e-16 Score=119.26 Aligned_cols=153 Identities=10% Similarity=0.167 Sum_probs=106.1
Q ss_pred ceeEEEeeeeccCCCEE----EEEE--cCCc-eEEe-eeeeEEecCCeEEEEeC-CCceEEEEEcccCCCCCeEEEEEEE
Q psy16425 3 ARMLIEIGEMLMAESTV----AWLR--VDTQ-TILT-IQTHVITKNHRIGVTHS-ETKAWYLHIREVRESDRGWYMCQVN 73 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i----~W~k--~~~~-~~~~-~~~~~~~~~~r~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~~~ 73 (163)
..+.|.|...+.|.+.+ .|++ ++.. .+.. .+.......+|+.+... ..+.++|.|.+++.+|+|.|+|.++
T Consensus 347 ~~v~l~C~~~~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~an 426 (585)
T 2ocw_A 347 SSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLTN 426 (585)
T ss_pred CcEEEEEecCCCCCccEEEEEEEEccCCCCCceeeeecceeecccCCCEEEeccCCCcEEEEEECCCChhhCEEEEEccc
Confidence 46788899888999887 7998 4331 2221 11112234556666543 2345579999999999999999983
Q ss_pred eCCCceEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEec----cCCCCeEEEEECCeEEEecCCc------eE---
Q psy16425 74 TDPMKSQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAAS----GSPKPNITWRREGGELIAQGNG------QE--- 140 (163)
Q Consensus 74 ~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~----~~p~p~v~W~~~~~~~~~~~~~------~~--- 140 (163)
..+.....+.|.|...|.....+ ....+.+|+.+.|.|.+. +.|.|.+.|++++..+...... ..
T Consensus 427 ~~g~~~~~~~l~V~~~~p~~~~~--~~~~v~~G~~v~L~C~~~~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~ 504 (585)
T 2ocw_A 427 GDTLWRTTVEIKIIEGEPNLKVP--GNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDE 504 (585)
T ss_pred CCCccceeEEEEEecCccccccC--CceeEecCCcEEEEEEecCCCCCCccEEEEEeecCceeeeccCCCCCcceEEecC
Confidence 33555666777777654444333 356788999999999997 6788899999999887554321 11
Q ss_pred --EeceEEEEcchhhhHhh
Q psy16425 141 --DFPFFKRTKKKKKKKKK 157 (163)
Q Consensus 141 --~~~~l~i~~v~~~~~~~ 157 (163)
....|+|.+++.+|.+.
T Consensus 505 ~~~~~~L~i~~v~~~d~G~ 523 (585)
T 2ocw_A 505 NSRLVSLTLNLVTRADEGW 523 (585)
T ss_pred cccEEEEEECCCCcccCeE
Confidence 12589999999998763
No 83
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.72 E-value=2e-16 Score=106.78 Aligned_cols=130 Identities=18% Similarity=0.338 Sum_probs=86.5
Q ss_pred ceeEEEeeeeccCC-CEEEEEEcCCc----eEEeeeeeEEecCCeEE----------EEeCCCceEEEEEcccCCCCCeE
Q psy16425 3 ARMLIEIGEMLMAE-STVAWLRVDTQ----TILTIQTHVITKNHRIG----------VTHSETKAWYLHIREVRESDRGW 67 (163)
Q Consensus 3 ~~~~~~~~~~~~~~-~~i~W~k~~~~----~~~~~~~~~~~~~~r~~----------~~~~~~~~~~L~i~~v~~~d~G~ 67 (163)
..+.|.|...+.+. +.|.|++.+.. .+............|+. +...+ .|.|.+++.+|+|.
T Consensus 16 ~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~----~L~i~~v~~~D~G~ 91 (231)
T 2pet_A 16 KSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQG----RLVLAEAQVGDERD 91 (231)
T ss_dssp CCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTC----CEEESSCCGGGCEE
T ss_pred CCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCc----eEEEcccCcccCce
Confidence 46888999888885 89999985433 22110000000122332 33332 59999999999999
Q ss_pred EEEEEEeC--CCceEeEEEEEEcCCcccccC-CCCcEEEeCCCcE-EEEeEe-ccCCCCeEEEEECCeEEEecC
Q psy16425 68 YMCQVNTD--PMKSQVGYLEVVVPPDILDYP-TSTDMVIREGSNV-TLKCAA-SGSPKPNITWRREGGELIAQG 136 (163)
Q Consensus 68 Y~C~~~~~--~~~~~~~~l~v~~~p~~~~~~-~~~~~~~~~g~~~-~l~C~~-~~~p~p~v~W~~~~~~~~~~~ 136 (163)
|+|.+.+. +.....+.|.|..+|...... ......+.+|+.+ .|.|.+ .+.|.|.+.|++++..+....
T Consensus 92 Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~~~~~~~~ 165 (231)
T 2pet_A 92 YVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEVPV 165 (231)
T ss_dssp EEEEEECGGGCEEEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEETTEECCCCS
T ss_pred EEEEEEecCCCceEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEECCccCcccc
Confidence 99999665 344556678888776432211 1123445678887 999999 899999999999998875554
No 84
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.71 E-value=2.4e-16 Score=101.80 Aligned_cols=126 Identities=17% Similarity=0.244 Sum_probs=93.4
Q ss_pred ceeEEEeeeeccC-CCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCceEe
Q psy16425 3 ARMLIEIGEMLMA-ESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~-~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~ 81 (163)
..+.|.|...+.| .+.+.|++ ++..+. .. ...+.|.+++.+|+|.|+|.+.+ ...+..
T Consensus 20 ~~v~l~C~~~~~p~~~~~~W~~-~g~~~~--------~~-----------~~~~~~~~~~~~d~G~Y~C~~~~-~~~s~~ 78 (170)
T 3ry4_A 20 DSVTLTCQGARSPESDSIQWFH-NGNLIP--------TH-----------TQPSYRFKANNNDSGEYTCQTGQ-TSLSDP 78 (170)
T ss_dssp CEEEEEEESCCCSSSSCEEEEE-TTEECT--------TC-----------CSSEEEEECCGGGCEEEEEEETT-SBCCCC
T ss_pred CcEEEEEEecCCCCcceEEEEE-CCeEcc--------cC-----------ccceEEEecccccCeEEEEEEeC-CCceEe
Confidence 4678889888876 67999999 554431 11 11567889999999999999964 334455
Q ss_pred EEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEec-cCCCCeEEEEECCeEEEecCCceEEeceEEEEcchhhhHh
Q psy16425 82 GYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAAS-GSPKPNITWRREGGELIAQGNGQEDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 82 ~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~-~~p~p~v~W~~~~~~~~~~~~~~~~~~~l~i~~v~~~~~~ 156 (163)
+.|.|..++.....+ ...+.+|+.+.|.|.+. +.|.+.+.|++++..+.... .+..|.|.+++.+|.+
T Consensus 79 ~~l~v~~~~~~~~~~---~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~----~~~~L~i~~v~~~d~G 147 (170)
T 3ry4_A 79 VHLTVLFEWLVLQTP---HLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFSH----LDPTFSIPQANHSHSG 147 (170)
T ss_dssp EEEEEECCSEEEECS---CSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEEES----SCCEEEESSCCGGGCE
T ss_pred EEEEEECCceEecCC---CceeecCCeEEEEEECCCCCCCceEEEEECCeEccccC----CCCeEEEEeccccCCE
Confidence 778888766554433 34678899999999995 56778999999998875432 2456999999988875
No 85
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.71 E-value=3.6e-17 Score=111.85 Aligned_cols=126 Identities=18% Similarity=0.256 Sum_probs=79.6
Q ss_pred cceeEEEeeeeccCCCE-----EEEEEcCCce-----EEee-eeeEEecCC--eEEEEeCCCceEEEEEcccCCCCCeEE
Q psy16425 2 AARMLIEIGEMLMAEST-----VAWLRVDTQT-----ILTI-QTHVITKNH--RIGVTHSETKAWYLHIREVRESDRGWY 68 (163)
Q Consensus 2 ~~~~~~~~~~~~~~~~~-----i~W~k~~~~~-----~~~~-~~~~~~~~~--r~~~~~~~~~~~~L~i~~v~~~d~G~Y 68 (163)
..++.|.|...+.|.+. |.|++.+... ++.. +........ ++.......++++|.|.+++.+|+|.|
T Consensus 18 G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y 97 (248)
T 3pv7_A 18 NDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPGIQLEEAGEY 97 (248)
T ss_dssp TSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESSCCGGGCEEE
T ss_pred CCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCCCCHHHCeEE
Confidence 34688999988777765 9999964321 1111 111111111 111111223566899999999999999
Q ss_pred EEEEEeCC-CceEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEecc-CCCC-eEEEEECCe
Q psy16425 69 MCQVNTDP-MKSQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASG-SPKP-NITWRREGG 130 (163)
Q Consensus 69 ~C~~~~~~-~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p-~v~W~~~~~ 130 (163)
+|.+.+.. .......|.|..+|.+...+. .....|+.+.|.|.+.+ .|.| .+.|++++.
T Consensus 98 ~C~~~~~~~~~~~~~~L~V~~~P~v~~~~~---~~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~ 159 (248)
T 3pv7_A 98 RCEVVVTPLKAQGTVQLEVVASPASRLLLD---QVGMKENEDKYMCESSGFYPEAINITWEKQTQ 159 (248)
T ss_dssp EEEEEETTEEEEEEEEEEEEBCCEEEEECC-----------CEEEEEEEEEBSSCCEEEEEEECS
T ss_pred EEEEEeCCccceeEEEEEEecCCceEEecC---CccccCCCcEEEEEEccEECCCeEEEEEECCc
Confidence 99997653 344566788888887665442 23456788889999998 8998 999999985
No 86
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.71 E-value=1.8e-16 Score=108.53 Aligned_cols=151 Identities=16% Similarity=0.227 Sum_probs=95.7
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCc-e---EEe-eeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCC
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQ-T---ILT-IQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPM 77 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~-~---~~~-~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~ 77 (163)
.++.|.|...+.|.+.|.|++.+.. . +.. .........+|+..... .++++|.|.+++.+|+|.|.|.+.+...
T Consensus 20 ~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~~~n~~~ 98 (250)
T 3esu_F 20 DRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGS-GTDYSLTISNLEQEDIGTYFCQQGNTLP 98 (250)
T ss_dssp CCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEE-TTEEEEEESSCCGGGCEEEEEEECSSSS
T ss_pred CcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCC-CCEEEEEEccCChhhCEEEEEEEeeCCC
Confidence 4688999999999999999995321 1 111 01111122456654432 3567899999999999999999965422
Q ss_pred --ceEeEEEEEEcCC-------------------cccccCCCCcEEEeCCCcEEEEeEeccCC--CCeEEEEEC--CeEE
Q psy16425 78 --KSQVGYLEVVVPP-------------------DILDYPTSTDMVIREGSNVTLKCAASGSP--KPNITWRRE--GGEL 132 (163)
Q Consensus 78 --~~~~~~l~v~~~p-------------------~~~~~~~~~~~~~~~g~~~~l~C~~~~~p--~p~v~W~~~--~~~~ 132 (163)
......|.|..++ .....+ ....+.+|+++.|.|.+.+.| .+.+.|+++ +..+
T Consensus 99 ~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~ 176 (250)
T 3esu_F 99 WTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQS--GPELVKPGASVKISCKDSGYAFSSSWMNWVKQRPGQGP 176 (250)
T ss_dssp CEECCCEEEEEC------------------------CEEC--CCEEECTTCCEEEEEECCSTTGGGSEEEEEEECTTSCC
T ss_pred ceECCCEEEEEECCCCcccccccccccccCcccceEEecC--CceEEcCCceEEEEEEecCCcccCCEEEEEEECCCCCc
Confidence 2233456665431 122212 356788999999999998876 789999987 4332
Q ss_pred Eec-----------------CCceE------EeceEEEEcchhhhHh
Q psy16425 133 IAQ-----------------GNGQE------DFPFFKRTKKKKKKKK 156 (163)
Q Consensus 133 ~~~-----------------~~~~~------~~~~l~i~~v~~~~~~ 156 (163)
... .+... ....|+|.+++.+|.+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG 223 (250)
T 3esu_F 177 EWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSA 223 (250)
T ss_dssp EEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCE
T ss_pred EEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCE
Confidence 111 11111 1126999999999875
No 87
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.71 E-value=1.9e-16 Score=112.38 Aligned_cols=128 Identities=15% Similarity=0.261 Sum_probs=86.1
Q ss_pred ceeEEEeeeecc-CCCEEEEEEcCCce---EEeeeeeEEecCCeEEEEeCC----CceEEEEEcccCCCCCeEEEEEEEe
Q psy16425 3 ARMLIEIGEMLM-AESTVAWLRVDTQT---ILTIQTHVITKNHRIGVTHSE----TKAWYLHIREVRESDRGWYMCQVNT 74 (163)
Q Consensus 3 ~~~~~~~~~~~~-~~~~i~W~k~~~~~---~~~~~~~~~~~~~r~~~~~~~----~~~~~L~i~~v~~~d~G~Y~C~~~~ 74 (163)
..+.|.|...+. |.+.|.|++.+... +..... ....|+...... ....+|.|.+++.+|+|.|+|.+.+
T Consensus 19 ~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~---~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 95 (327)
T 2wng_A 19 ESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKE---GHFPRVTTVSESTKRENMDFSISISNITPADAGTYYCVKFR 95 (327)
T ss_dssp SCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTS---SCCTTEEECC---CTTCCBCCEEECSCCGGGCEEEEEEEEE
T ss_pred CcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCC---CCcceeeeecccccccCceeEEEEccCccccCeEEEEEeec
Confidence 468888998887 88999999954321 111000 112344433221 3455899999999999999999977
Q ss_pred CCCc------eEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCC--eEEEEECCeEEEe
Q psy16425 75 DPMK------SQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKP--NITWRREGGELIA 134 (163)
Q Consensus 75 ~~~~------~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p--~v~W~~~~~~~~~ 134 (163)
.... ...+.|.|...|....... +...+.+|+.+.|.|.+.+.|+| .+.|++++..+..
T Consensus 96 ~~~~~~~~~~~~~~~l~V~~~p~~p~i~~-~~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~ 162 (327)
T 2wng_A 96 KGSPDTEFKSGAGTELSVRAKPSAPVVSG-PAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSD 162 (327)
T ss_dssp SSTTCEEEEECCCEEEEEEBCCCCCEEEC-CSSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCC
T ss_pred CCCcceeEeecCcEEEEEEecCCCceeec-cccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEccc
Confidence 6432 1345777877664332221 13457889999999999988766 8999999988743
No 88
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.71 E-value=1.5e-17 Score=110.21 Aligned_cols=138 Identities=18% Similarity=0.186 Sum_probs=89.7
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCC----Cc
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDP----MK 78 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~----~~ 78 (163)
..+.|.|...+.|. .+.|+| ++..+... ...+.... ....|.|.+++.+|+|.|+|.+.+.. ..
T Consensus 20 ~~v~L~C~~~~~~~-~~~W~k-~g~~~~~~------~~~~~~~~----~~~~L~i~~v~~~D~G~Y~C~a~n~~~g~~~~ 87 (198)
T 1ugn_A 20 SPVTLRCQGGQETQ-EYRLYR-EKKTAPWI------TRIPQELV----KKGQFPIPSITWEHTGRYRCYYGSDTAGRSES 87 (198)
T ss_dssp CCEEEEEECCTTCC-CEEEEE-SSSCCHHH------HTSCHHHH----TTTEEEESSCCGGGCEEEEEEEEETTTEECCC
T ss_pred CcEEEEEEecCCCc-EEEEEE-CCcccccc------ccccccCC----cccEEEECCCCHHHCeEEEEEEECCCCCcccC
Confidence 46888898887776 699999 44433110 00000000 12389999999999999999997753 23
Q ss_pred eEeEEEEEEc---CCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCc---eE---EeceEEEEc
Q psy16425 79 SQVGYLEVVV---PPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNG---QE---DFPFFKRTK 149 (163)
Q Consensus 79 ~~~~~l~v~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~---~~---~~~~l~i~~ 149 (163)
+..+.|.|.. .|.+...+ ...+.+|+++.|.|.+.+. .|.+.|++++..+...... .. ..+.|+|.+
T Consensus 88 s~~~~l~V~~~~~~p~i~~~~---~~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~ 163 (198)
T 1ugn_A 88 SDPLELVVTGAYIKPTLSAQP---SPVVNSGGNVTLQCDSQVA-FDGFILCKEGEDEHPQCLNSQPHARGSSRAIFSVGP 163 (198)
T ss_dssp CCCEEEEEECSSCCCEEEEES---CSEEETTCCEEEEEECSSC-CSEEEEEEC------CEEEC------CCEEEEEECC
T ss_pred CccEEEEEcccccCCccccCC---ccccCCCCcEEEEEecCCC-CcEEEEEECCCccCCccccccccCCCcceeEEEecc
Confidence 4556777776 23333322 3467899999999999988 7899999999876432111 11 237899999
Q ss_pred chhhhHh
Q psy16425 150 KKKKKKK 156 (163)
Q Consensus 150 v~~~~~~ 156 (163)
|+.+|.+
T Consensus 164 v~~~D~G 170 (198)
T 1ugn_A 164 VSPSRRW 170 (198)
T ss_dssp CCTTSCE
T ss_pred cCcccCe
Confidence 9999876
No 89
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.71 E-value=7.4e-17 Score=115.29 Aligned_cols=139 Identities=14% Similarity=0.158 Sum_probs=72.7
Q ss_pred eeEEEeee-----eccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCC-C
Q psy16425 4 RMLIEIGE-----MLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDP-M 77 (163)
Q Consensus 4 ~~~~~~~~-----~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~-~ 77 (163)
.+.|.|.. .+.|.+.|.|++ ++..+ ....++.... ..|.|.+++.+|+|.|+|.+.+.. .
T Consensus 137 ~~~l~C~~~~~~~~g~p~~~v~W~k-~~~~l--------~~~~~~~~~~-----~~L~i~~v~~~d~G~Y~C~a~n~~~g 202 (349)
T 4dep_C 137 IQRITCPNVDGYFPSSVKPTITWYM-GCYKI--------QNFNNVIPEG-----MNLSFLIALISNNGNYTCVVTYPENG 202 (349)
T ss_dssp EEEEECCSCTTSSCTTSCCEEEEEE-TTEEC--------CSCSSEEEET-----TEEEEESCCGGGCEEEEEEEEEEETT
T ss_pred cEEEEcCCCcccccCCCCceEEEee-CCEEC--------CCccceeecC-----CEEEEeeeeecCCcEEEEEEEEeeCC
Confidence 57788864 678999999999 55543 1112332222 179999999999999999997652 2
Q ss_pred c----eEeEEEEEEc------CCcccccCCCCcEEEeCCCcEEEEeEec----cCCCCeEEEEECCeEEEe-cCCc----
Q psy16425 78 K----SQVGYLEVVV------PPDILDYPTSTDMVIREGSNVTLKCAAS----GSPKPNITWRREGGELIA-QGNG---- 138 (163)
Q Consensus 78 ~----~~~~~l~v~~------~p~~~~~~~~~~~~~~~g~~~~l~C~~~----~~p~p~v~W~~~~~~~~~-~~~~---- 138 (163)
. .....|.+.. +|.+...+......+.+|+.+.|.|.+. +.|.|.+.|++++..+.. ....
T Consensus 203 ~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~ 282 (349)
T 4dep_C 203 RTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINE 282 (349)
T ss_dssp EEEEEEEEEEEEEECCGGGCCSCEEC----------------CCCEEEEECCCTTCCCEEEEESSCC--------CCCCE
T ss_pred EEEEEEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCcEEEEEEEEEccCCCCCCEEEEEECCEEccccCCcccccc
Confidence 2 3444555554 3444332211112678899999999998 578999999999988755 1111
Q ss_pred ---------eEEeceEEEEcchhhhH-h
Q psy16425 139 ---------QEDFPFFKRTKKKKKKK-K 156 (163)
Q Consensus 139 ---------~~~~~~l~i~~v~~~~~-~ 156 (163)
......|+|.+++.+|. +
T Consensus 283 ~~~~~~~~~~~~~~~L~i~~v~~~d~~G 310 (349)
T 4dep_C 283 SISHSRTEDETRTQILSIKKVTSEDLKR 310 (349)
T ss_dssp EEECCTTCCEEEEECC------------
T ss_pred ceeeecCCCcEEEEEEEEeeccHHHcCC
Confidence 11245599999999987 5
No 90
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.71 E-value=2.2e-16 Score=107.77 Aligned_cols=130 Identities=18% Similarity=0.334 Sum_probs=85.5
Q ss_pred ceeEEEeeeeccCCCEEEEEEcC-CceE---Ee-eeeeE-Eec---CCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVD-TQTI---LT-IQTHV-ITK---NHRIGVTHSETKAWYLHIREVRESDRGWYMCQVN 73 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~-~~~~---~~-~~~~~-~~~---~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~ 73 (163)
.++.|.| ..+.+.+.|.||+.. +... .. ..... ... .+|+.+.....++++|.|.+++.+|+|.|.|.+.
T Consensus 18 ~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~ 96 (245)
T 4ei6_B 18 QMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQPTALEDSAVYFCASS 96 (245)
T ss_dssp CCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEECSCCGGGCEEEEEEEE
T ss_pred CCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEECCCCHhHCEEEEEEEc
Confidence 4688889 777888999999832 1111 11 11111 111 2788887766678899999999999999999996
Q ss_pred eC-----CCceEeEEEEEEc------CCcccccCCCCcEEEeCCCcEEEEeEecc-CCCC-eEEEEECCeEEEe
Q psy16425 74 TD-----PMKSQVGYLEVVV------PPDILDYPTSTDMVIREGSNVTLKCAASG-SPKP-NITWRREGGELIA 134 (163)
Q Consensus 74 ~~-----~~~~~~~~l~v~~------~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p-~v~W~~~~~~~~~ 134 (163)
+. ........|.|.. +|.+..... ....+.+|+.+.|.|.+.+ .|.+ .+.|+++|..+..
T Consensus 97 ~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~-~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~~~g~~l~~ 169 (245)
T 4ei6_B 97 FWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEP-SEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHS 169 (245)
T ss_dssp CSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECC-CHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECT
T ss_pred cCCCcceEEEcCCcEEEEecccCCCCCceEEEeCC-CcccccCCCceEEEEEEeeEeCCCeEEEEEECCEECCC
Confidence 42 1223345666663 333322221 1223456899999999988 5555 7999999987743
No 91
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.71 E-value=6.4e-17 Score=108.13 Aligned_cols=128 Identities=17% Similarity=0.218 Sum_probs=84.7
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCC-ceE--Eee--eeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCC-
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDT-QTI--LTI--QTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDP- 76 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~-~~~--~~~--~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~- 76 (163)
.++.|.|...+.|.+.|.||+.+. ... ... .........|+.... ..++++|.|.+++.+|+|.|+|.+.+..
T Consensus 17 ~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 95 (213)
T 3r06_A 17 DRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSG-SGRDSSFTISSLESEDIGSYYCQQYYNYP 95 (213)
T ss_dssp CCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ETTEEEEEESSCCGGGCSEEEEEECSSSS
T ss_pred CcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEec-cCCEEEEEECCCCcccCEEEEEecccCCc
Confidence 478899999999999999998431 111 110 111112345666653 3356799999999999999999996542
Q ss_pred -CceEeEEEEE---EcCCcccccCCCCcEEEeCCCcEEEEeEeccCCC--CeEEEEECCeEEE
Q psy16425 77 -MKSQVGYLEV---VVPPDILDYPTSTDMVIREGSNVTLKCAASGSPK--PNITWRREGGELI 133 (163)
Q Consensus 77 -~~~~~~~l~v---~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~--p~v~W~~~~~~~~ 133 (163)
.......|.| ..+|.+...+. ......|+.+.|.|.+.+.|+ +.+.|++++..+.
T Consensus 96 ~~~~~~~~l~V~~~~~~p~v~~~~~--~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~ 156 (213)
T 3r06_A 96 WTFGPGTKLEIKRADAKPTVSIFPP--SSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKR 156 (213)
T ss_dssp CEECCCEEEEECCCCBCCEEEEECC--CHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEEC
T ss_pred eEEcCCceEEEeccCCCceeeeeCC--CceecCCCCcEEEEEEeeecCCceEEEEEECCcccC
Confidence 2233445666 33444443332 223446888999999987654 3899999998874
No 92
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.71 E-value=7.6e-17 Score=126.71 Aligned_cols=144 Identities=22% Similarity=0.334 Sum_probs=104.3
Q ss_pred ceeEEEeeeeccCC-CEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceE
Q psy16425 3 ARMLIEIGEMLMAE-STVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQ 80 (163)
Q Consensus 3 ~~~~~~~~~~~~~~-~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~ 80 (163)
..+.|.|...+.+. +.|.|++ ++..+. ...++...........|.|.+++.+|+|.|+|.+.|. +....
T Consensus 635 ~~v~L~C~~~~~~~~~~i~W~~-~g~~l~--------~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~ 705 (816)
T 3dmk_A 635 QYLTLHCSVPGGDLPLNIDWTL-DGQAIS--------EDLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQF 705 (816)
T ss_dssp CEEEEEEBCCCSSSCCEEEEEE-TTBCCC--------GGGTCEEEEETTTEEEEEEESCCGGGCEEEEEEEECSSCEEEE
T ss_pred CeEEEEEEEeCCCCCCEEEEEE-CCeEcC--------CCCCeeEEEcCCCeeEEEEccCChhhCEEEEEEEEeCCccEEE
Confidence 35778888765444 5999999 555442 1122222222334558999999999999999999776 45566
Q ss_pred eEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEE-------EecCCceEEeceEEEEcchhh
Q psy16425 81 VGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGEL-------IAQGNGQEDFPFFKRTKKKKK 153 (163)
Q Consensus 81 ~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~-------~~~~~~~~~~~~l~i~~v~~~ 153 (163)
.+.|.|..+|.+...+ ....+.+|+++.|.|.+.|.|.|.+.|++++..+ .........++.|.|.+++.+
T Consensus 706 ~~~l~V~~~P~~~~~~--~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 783 (816)
T 3dmk_A 706 TTPLNVYVPPRWILEP--TDKAFAQGSDAKVECKADGFPKPQVTWKKAVGDTPGEYKDLKKSDNIRVEEGTLHVDNIQKT 783 (816)
T ss_dssp EEEECEEEEEEEEECC--CCEEEETTCCEEEECEEEEESCCEEECCEECSSSTTCCBCCCCBTTEEEETTEEEECSCCGG
T ss_pred EEEEEEEeCCceeeec--ccceecCCCcEEEEEEEecCCCCeEEEEecCCCCCccccccccCCCEEecCCEEEECcCChh
Confidence 6788888888876654 3567889999999999999999999999986432 112222345678999999999
Q ss_pred hHhh
Q psy16425 154 KKKK 157 (163)
Q Consensus 154 ~~~~ 157 (163)
|.+.
T Consensus 784 d~G~ 787 (816)
T 3dmk_A 784 NEGY 787 (816)
T ss_dssp GCEE
T ss_pred hCeE
Confidence 9763
No 93
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.71 E-value=9.6e-17 Score=112.74 Aligned_cols=136 Identities=23% Similarity=0.344 Sum_probs=93.5
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCce--E
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKS--Q 80 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~--~ 80 (163)
..+.|.|...+.|.+.|.|++ ++..+... ....++.....+ .|.|.+++.+|+|.|+|.+.+..... .
T Consensus 124 ~~v~l~C~~~g~p~~~v~W~k-~~~~~~~~-----~~~~~~~~~~~~----~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 193 (304)
T 2yd9_A 124 RTATMLCAASGNPDPEITWFK-DFLPVDPS-----ASNGRIKQLRSG----ALQIESSEETDQGKYECVATNSAGVRYSS 193 (304)
T ss_dssp SCEEECCEEECSSCCEEEEEE-TTEECCGG-----GGTTSEEECTTS----CEEECSCCGGGCEEEEEEEEETTEEEECC
T ss_pred CeEEEEEECccCCCCeEEEEE-CCEECcCC-----CCcceEEeCCCe----EEEEccCCcccCEEEEEEEEeCCCCEEec
Confidence 357888999999999999999 55443211 112244333333 79999999999999999997763222 1
Q ss_pred eEEEEEEc---CCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceEEeceEEEEcc
Q psy16425 81 VGYLEVVV---PPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQEDFPFFKRTKK 150 (163)
Q Consensus 81 ~~~l~v~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~l~i~~v 150 (163)
...+.|.+ +|.+...+. ...+.+|+.+.|.|.+.|.|.|.+.|++++..+............|.|.++
T Consensus 194 ~~~l~v~~~~~~P~~~~~~~--~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~L~i~~~ 264 (304)
T 2yd9_A 194 PANLYVRVQNVAPRFSILPM--SHEIMPGGNVNITCVAVGSPMPYVKWMQGAEDLTPEDDMPVGRNVLELTDV 264 (304)
T ss_dssp CEEEEEECCCEEEEEEECCC--CBCCCTTCCEEEEEEEEEESCCEEEEEETTEECSCSSSCCBSEEEEEECSC
T ss_pred cEEEEEEeeccCCcEEecCC--ceEEcCCCeEEEEEEEeeeCCCEEEEEECCEECCCcccccCCcEEEEEccc
Confidence 24555543 444444332 355788999999999999999999999999887555433333344666555
No 94
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.71 E-value=1.9e-16 Score=114.95 Aligned_cols=144 Identities=18% Similarity=0.334 Sum_probs=103.3
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCC--ceE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPM--KSQ 80 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~--~~~ 80 (163)
..+.|.|...+.|.+.|.|++ ++..+... ....+......+ +|.|.+++.+|+|.|+|.+.+... ...
T Consensus 137 ~~v~l~C~~~~~p~~~v~W~~-~~~~~~~~-----~~~~~~~~~~~~----~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~ 206 (403)
T 3laf_A 137 DTVLLKCEVIGDPMPTIHWQK-NQQDLNPI-----PGDSRVVVLPSG----ALQISRLQPGDSGVYRCSARNPASTRTGN 206 (403)
T ss_dssp SCEEECCCEECSSCCEEEEEE-SSSBCCCC-----TTCCSEEECTTS----CEEECSCCGGGCEEEEEEEECSSCCCBCC
T ss_pred CeEEEEEEEcccCCCeEEEEE-CCEecccc-----CCceEEEEcCCc----eEEEcccccccCEEEEEEEEcCCCceecc
Confidence 467888988889999999999 44443110 122333333333 799999999999999999976532 334
Q ss_pred eEEEEEEcCCcccc----cCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCce--EEeceEEEEcchhhh
Q psy16425 81 VGYLEVVVPPDILD----YPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQ--EDFPFFKRTKKKKKK 154 (163)
Q Consensus 81 ~~~l~v~~~p~~~~----~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~--~~~~~l~i~~v~~~~ 154 (163)
...+.+...|.... ........+.+|+.+.|.|.+.+.|.|.+.|++++..+....... ..++.|.|.+++.+|
T Consensus 207 ~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 286 (403)
T 3laf_A 207 EAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSLLGGSNLLISNVTDDD 286 (403)
T ss_dssp CEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCSSSSEEEETTTEEEECSCCGGG
T ss_pred ceeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEcCCCCCCeEEEEECCeeccCCCceEEECCccEEEEeCCCHHH
Confidence 56777777664321 112235667899999999999999999999999998875443332 245789999999998
Q ss_pred Hh
Q psy16425 155 KK 156 (163)
Q Consensus 155 ~~ 156 (163)
.+
T Consensus 287 ~G 288 (403)
T 3laf_A 287 SG 288 (403)
T ss_dssp CE
T ss_pred CE
Confidence 75
No 95
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.70 E-value=2e-16 Score=112.16 Aligned_cols=142 Identities=15% Similarity=0.104 Sum_probs=101.3
Q ss_pred eeEEEee-eeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 4 RMLIEIG-EMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 4 ~~~~~~~-~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
.+.|.|. ..+.|.+.|.|++....... ........+.+.... .|.|.++..+|+|.|+|.+.+. +.....
T Consensus 152 ~~~l~C~~~~~~p~~~i~W~~~~~~~~~--~~~~~~~~~~~~~~~------~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~ 223 (331)
T 3u83_A 152 VLVATCTSANGKPPSVVSWETRLKGEAE--YQEIRNPNGTVTVIS------RYRLVPSREAHQQSLACIVNYHMDRFKES 223 (331)
T ss_dssp EEEEEEEEEEEBSCCEEEEEESSCCEEE--EEEEECTTSCEEEEE------EEEECCCGGGTTCEEEEEEEETTEEEEEE
T ss_pred eEEEEEEecCCcCCceEEEEcCCCCccc--cceeECCCCcEEEEE------EEEEEeccccCCCEEEEEEecCCCcceee
Confidence 3788886 88899999999994222211 111112233333322 6899999999999999999776 334455
Q ss_pred EEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCe-EEEEECCeEEEecCCceEEeceEEEE-cchhhhHh
Q psy16425 82 GYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPN-ITWRREGGELIAQGNGQEDFPFFKRT-KKKKKKKK 156 (163)
Q Consensus 82 ~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~-v~W~~~~~~~~~~~~~~~~~~~l~i~-~v~~~~~~ 156 (163)
+.|.|..+|.+...+. ....+.+|+.+.|.|.+.++|.|. +.|++++..+... ....++.|.|. +++.+|.+
T Consensus 224 ~~l~V~~~P~~~~~~~-~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~~~--~~~~~~~L~i~~~v~~~d~G 297 (331)
T 3u83_A 224 LTLNVQYEPEVTIEGF-DGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPKG--VEAQNRTLFFKGPINYSLAG 297 (331)
T ss_dssp EECCEEEEEEEEEECC-CSCCBTTCCCEEEEEEEEEESCCCEEEEEETTBSCCTT--EEEETTEEEECSCCCGGGCE
T ss_pred EEEEEecCCeEEEecC-CCceEeCCCeEEEEEeCcCCCCCCEEEEEECCCccccc--ceecCcEEEEeCCCccccCe
Confidence 6777777776654332 244577899999999999999998 9999999876322 33466789999 89998875
No 96
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.70 E-value=7.9e-16 Score=105.95 Aligned_cols=154 Identities=12% Similarity=0.149 Sum_probs=98.5
Q ss_pred ceeEEEeeeeccC--CCEEEEEEcC-Cce---EEeee---eeE--EecCCeEEEEeCC-CceEEEEEcccCCCCCeEEEE
Q psy16425 3 ARMLIEIGEMLMA--ESTVAWLRVD-TQT---ILTIQ---THV--ITKNHRIGVTHSE-TKAWYLHIREVRESDRGWYMC 70 (163)
Q Consensus 3 ~~~~~~~~~~~~~--~~~i~W~k~~-~~~---~~~~~---~~~--~~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C 70 (163)
..+.|.|...+.| .+.|.||+.+ +.. +.... ... ....+|+.+.... .+.++|.|.+++.+|+|.|.|
T Consensus 16 ~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C 95 (257)
T 1f3r_B 16 ETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQTDDTGTYYC 95 (257)
T ss_dssp SEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCCTTCCEEEEE
T ss_pred ceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCCcccCEEEEE
Confidence 4688999988764 7899999952 111 11100 000 1124677776542 457799999999999999999
Q ss_pred EEEeCCC-------c---eEeEEEEEEcCCc-------------ccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEE
Q psy16425 71 QVNTDPM-------K---SQVGYLEVVVPPD-------------ILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRR 127 (163)
Q Consensus 71 ~~~~~~~-------~---~~~~~l~v~~~p~-------------~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~ 127 (163)
.+.+... . ...+.|.|...|. ...........+.+|+++.|.|.+.+.|.+.+.|++
T Consensus 96 ~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k 175 (257)
T 1f3r_B 96 TRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCKGSQNINNYLAWYQ 175 (257)
T ss_dssp EEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEECSSCCBTCEEEEE
T ss_pred EEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEEECCcCCCcEEEEE
Confidence 9976521 1 1234677765431 111111124557899999999999999889999999
Q ss_pred --CCeEEEe------------cCCceE----EeceEEEEcchhhhHh
Q psy16425 128 --EGGELIA------------QGNGQE----DFPFFKRTKKKKKKKK 156 (163)
Q Consensus 128 --~~~~~~~------------~~~~~~----~~~~l~i~~v~~~~~~ 156 (163)
++..+.. ..+... ....|+|.++..+|.+
T Consensus 176 ~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 222 (257)
T 1f3r_B 176 QKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVA 222 (257)
T ss_dssp ECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCS
T ss_pred ECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCE
Confidence 5543211 111111 2247999999999875
No 97
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.70 E-value=3e-16 Score=107.16 Aligned_cols=131 Identities=19% Similarity=0.395 Sum_probs=85.3
Q ss_pred ceeEEEeeeeccCCCEEEEEEcC-CceEE---eee---eeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEe-
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVD-TQTIL---TIQ---THVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNT- 74 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~-~~~~~---~~~---~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~- 74 (163)
.++.|.|...+.+.+.|.||+.. +.... ... .......+|+.+.....++++|.|.+++.+|+|.|.|.+.+
T Consensus 17 ~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 96 (245)
T 3nfj_J 17 SPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLLSDSGFYLCAWSVS 96 (245)
T ss_dssp CCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCGGGCEEEEEEEECC
T ss_pred CCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCChhhCEEEEEEEeec
Confidence 47889999998899999999943 11111 110 00012245777665545678999999999999999999976
Q ss_pred ----CC--CceEeEEEEEEc------CCcccccCCCCcEEEeCCCcEEEEeEeccC-CCC-eEEEEECCeEEEe
Q psy16425 75 ----DP--MKSQVGYLEVVV------PPDILDYPTSTDMVIREGSNVTLKCAASGS-PKP-NITWRREGGELIA 134 (163)
Q Consensus 75 ----~~--~~~~~~~l~v~~------~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p-~v~W~~~~~~~~~ 134 (163)
.. .......|.|.. +|.+...+. ....+.+|+.+.|.|.+.+. |++ .+.|+++|..+..
T Consensus 97 ~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~-~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~ 169 (245)
T 3nfj_J 97 VGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEP-SEAEISHTQKATLVCLATGFFPDHVELSWWVNGKEVHS 169 (245)
T ss_dssp TTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEEC-CHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECT
T ss_pred cCCCceeEEECCCeEEEEEcccCCCCCCceEeecC-CcccccCCCceEEEEEEccCcCCCEEEEEEECCEECCC
Confidence 11 122334666765 333322111 11223458999999999984 544 6899999988743
No 98
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.70 E-value=1.8e-16 Score=105.32 Aligned_cols=138 Identities=15% Similarity=0.105 Sum_probs=89.4
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCC------
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDP------ 76 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~------ 76 (163)
.++.|.|... .+.+.+.|+|. +..+...... .+. .....+..|.|.+++.+|+|.|+|.+.+..
T Consensus 23 ~~v~L~C~~~-~~~~~~~w~k~-g~~~~~~~~~-----~~~---~~~~~~~~l~I~~v~~~D~G~Y~C~a~~~~~~~~~~ 92 (201)
T 1nkr_A 23 ETVILQCWSD-VMFEHFLLHRE-GMFNDTLRLI-----GEH---HDGVSKANFSISRMTQDLAGTYRCYGSVTHSPYQVS 92 (201)
T ss_dssp CCEEEEEEES-SCCSEEEEEEE-SSSCEEEEEE-----CEE---ETTEEEEEEEESSCCGGGCEEEEEEEEBTTBTTCCC
T ss_pred CcEEEEEecc-CCCCEEEEEEC-CCcCCcceee-----eec---CCCCceEEEEeccCCcccCeEEEEeEecCCCCcccc
Confidence 3678888876 47789999995 4433211100 000 111123489999999999999999996431
Q ss_pred CceEeEEEEEEcC---CcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCC-ce----EEeceEEEE
Q psy16425 77 MKSQVGYLEVVVP---PDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGN-GQ----EDFPFFKRT 148 (163)
Q Consensus 77 ~~~~~~~l~v~~~---p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~-~~----~~~~~l~i~ 148 (163)
..+..+.|.|... |.+...+ ...+.+|+++.|.|.+.+ |.+.+.|++++..+..... .. ..++.|.|.
T Consensus 93 ~~s~~~~l~V~~~~~~p~i~~~p---~~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~ 168 (201)
T 1nkr_A 93 APSDPLDIVIIGLYEKPSLSAQP---GPTVLAGENVTLSCSSRS-SYDMYHLSREGEAHERRLPAGPKVNGTFQADFPLG 168 (201)
T ss_dssp CCCCCEEEEEECSSCCCEEEEES---CSEECTTCEEEEEEEESS-CCSEEEEEETTCSSCEEEECEEEETTEEEEEEEEE
T ss_pred CCCCCEEEEeeccCCCCceecCC---CCccCCCCeEEEEEeCCC-CCceEEEEECCcccCcccccccccCCceEEEEEeC
Confidence 2234556777653 3443333 236789999999999986 5689999999876533211 11 125689999
Q ss_pred cchhhhHh
Q psy16425 149 KKKKKKKK 156 (163)
Q Consensus 149 ~v~~~~~~ 156 (163)
+|+ |++
T Consensus 169 ~v~--d~G 174 (201)
T 1nkr_A 169 PAT--HGG 174 (201)
T ss_dssp ECC--SCE
T ss_pred CcC--CCe
Confidence 997 654
No 99
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.70 E-value=1.7e-16 Score=107.13 Aligned_cols=128 Identities=18% Similarity=0.304 Sum_probs=85.0
Q ss_pred cceeEEEeeeeccCCC---EEEEEEcCCceEEe--eeeeE------EecCCeEEEEeCC--CceEEEEEcccCCCCCeEE
Q psy16425 2 AARMLIEIGEMLMAES---TVAWLRVDTQTILT--IQTHV------ITKNHRIGVTHSE--TKAWYLHIREVRESDRGWY 68 (163)
Q Consensus 2 ~~~~~~~~~~~~~~~~---~i~W~k~~~~~~~~--~~~~~------~~~~~r~~~~~~~--~~~~~L~i~~v~~~d~G~Y 68 (163)
+.++.|.|...+.+.+ .|.|+|.+...... ..+.. .....|+...... .++++|.|.+++.+|+|.|
T Consensus 19 G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 98 (226)
T 4f80_A 19 GEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVTASDSGKY 98 (226)
T ss_dssp TSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCCGGGCEEE
T ss_pred CCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCchHHCeeE
Confidence 3468899987665554 79999955433211 11111 1123455555443 3578999999999999999
Q ss_pred EEEEEeCCCceEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEecc-CCCCeEEEEECCeEE
Q psy16425 69 MCQVNTDPMKSQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASG-SPKPNITWRREGGEL 132 (163)
Q Consensus 69 ~C~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p~v~W~~~~~~~ 132 (163)
+|.+.+. .......+.+...+.....+ ....+.+|+.+.|.|.+.+ .|.|.++|+++++.+
T Consensus 99 ~C~a~n~-~~~~~~~v~~~~~~~~~~~~--~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~ 160 (226)
T 4f80_A 99 LCYFQDG-DFYEKALVELKVAALGSDLH--VDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGEN 160 (226)
T ss_dssp EEEEEET-TEEEEEEEEEEEEBCCCCCE--EEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCB
T ss_pred EEEEECC-CcEEEEEEEEeeccceeccc--ceeeeccCCceeeEEEeccCCCCCEEEEEECCceE
Confidence 9999764 33444455555444333322 3456778999999999987 699999999976554
No 100
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.70 E-value=8.4e-17 Score=109.06 Aligned_cols=151 Identities=15% Similarity=0.216 Sum_probs=94.7
Q ss_pred ceeEEEeeeeccCCCEEEEEEcC-Cce---EEee-eeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCC
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVD-TQT---ILTI-QTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPM 77 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~-~~~---~~~~-~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~ 77 (163)
.++.|.|...+.+.+.|.||+.+ +.. +... .........|+.... ..++++|.|.+++.+|+|.|.|.+.+...
T Consensus 40 ~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 118 (237)
T 3sob_L 40 DRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSG-SGTDFTLTISSLQPEDFATYYCQQSYTTP 118 (237)
T ss_dssp CCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ETTEEEEEESSCCGGGCEEEEEEECSSSS
T ss_pred CcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEc-CCCEEEEEECCCChhhCeEEEEeeccCCc
Confidence 46889999888889999999953 111 1111 111112245666653 23567899999999999999999965432
Q ss_pred --ceEeEEEEEEc---CCcccccCCCCcEEEeCCCcEEEEeEecc-CC-CCeEEEEECCeEEEecC----C-------ce
Q psy16425 78 --KSQVGYLEVVV---PPDILDYPTSTDMVIREGSNVTLKCAASG-SP-KPNITWRREGGELIAQG----N-------GQ 139 (163)
Q Consensus 78 --~~~~~~l~v~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p-~p~v~W~~~~~~~~~~~----~-------~~ 139 (163)
......+.|.. +|.+...+. .....+|+.+.|.|.+.+ .| .|.+.|++++..+.... . ..
T Consensus 119 ~~~~~~~~l~V~~~~~~p~v~~~~~--~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~ 196 (237)
T 3sob_L 119 PTFGQGTKVEIKRTVAAPSVFIFPP--SDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTY 196 (237)
T ss_dssp CEECCCEEEEEECCCBCCEEEEECC--CHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCCCTTTCCE
T ss_pred eEEcCcEEEEEecCCCCCceEEeCC--ChhhccCCceEEEEEEcccCCCceEEEEEECCCCCCCceeecccccccCCCcE
Confidence 23334566643 333332221 112335888999999987 55 58999999998765321 0 01
Q ss_pred EEeceEEEEcchhhhHh
Q psy16425 140 EDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 140 ~~~~~l~i~~v~~~~~~ 156 (163)
.....|.|..+..+|++
T Consensus 197 ~~~s~L~i~~~~~~d~g 213 (237)
T 3sob_L 197 SLSSTLTLSKADYEKHK 213 (237)
T ss_dssp EEEEEEEEEHHHHTTCC
T ss_pred EEEEEEEEcHHHccCCC
Confidence 12345777777766643
No 101
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.70 E-value=9.2e-16 Score=105.47 Aligned_cols=152 Identities=16% Similarity=0.212 Sum_probs=98.4
Q ss_pred ceeEEEeeeeccC--CCEEEEEEcC-CceEEee---------eeeEEecCCeEEEEeCC-CceEEEEEcccCCCCCeEEE
Q psy16425 3 ARMLIEIGEMLMA--ESTVAWLRVD-TQTILTI---------QTHVITKNHRIGVTHSE-TKAWYLHIREVRESDRGWYM 69 (163)
Q Consensus 3 ~~~~~~~~~~~~~--~~~i~W~k~~-~~~~~~~---------~~~~~~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~ 69 (163)
..+.|.|...+.+ .+.|.||+.. +...... ........+|+.+.... .+.++|.|.+++.+|+|.|.
T Consensus 18 ~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~ 97 (256)
T 3umt_A 18 ASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSLTSEDSAVYY 97 (256)
T ss_dssp CCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEE
T ss_pred CCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCCCcccCEEEE
Confidence 3678888877655 7899999853 2222111 01111234677776543 35678999999999999999
Q ss_pred EEEEeC-----CCceEeEEEEEEc----------------CCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEEC
Q psy16425 70 CQVNTD-----PMKSQVGYLEVVV----------------PPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRRE 128 (163)
Q Consensus 70 C~~~~~-----~~~~~~~~l~v~~----------------~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~ 128 (163)
|.+.+. ........|.|.. +|.+...+ ....+.+|+++.|.|.+.+.|.+.+.|+++
T Consensus 98 C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~ 175 (256)
T 3umt_A 98 CARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSP--SSLSASLGERVSITCRASQDIGSNLNWLQQ 175 (256)
T ss_dssp EEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEEC--SEEEECTTCCEEEEEEESSCCTTCEEEEEE
T ss_pred EEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCC--CeEEEECCCCEEEEEEEecCCCcEEEEEEE
Confidence 999654 1122345566653 33444333 356788999999999999998889999984
Q ss_pred --CeEEE--e----------cCCceE----EeceEEEEcchhhhHh
Q psy16425 129 --GGELI--A----------QGNGQE----DFPFFKRTKKKKKKKK 156 (163)
Q Consensus 129 --~~~~~--~----------~~~~~~----~~~~l~i~~v~~~~~~ 156 (163)
+..+. . ..+... ....|+|.+++.+|.+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 221 (256)
T 3umt_A 176 KPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFV 221 (256)
T ss_dssp CTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCS
T ss_pred CCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCE
Confidence 22211 0 011111 1235999999999875
No 102
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.70 E-value=3.1e-16 Score=105.56 Aligned_cols=150 Identities=17% Similarity=0.278 Sum_probs=94.8
Q ss_pred ceeEEEeeeeccC--CCEEEEEEcC-CceE---Eee-e-----eeE--EecCCeEEEEeCC-CceEEEEEcccCCCCCeE
Q psy16425 3 ARMLIEIGEMLMA--ESTVAWLRVD-TQTI---LTI-Q-----THV--ITKNHRIGVTHSE-TKAWYLHIREVRESDRGW 67 (163)
Q Consensus 3 ~~~~~~~~~~~~~--~~~i~W~k~~-~~~~---~~~-~-----~~~--~~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~ 67 (163)
.++.|.|...+.+ .+.|.||+.+ +... ... . ... ....+|+.+..+. .++++|.|.+++.+|+|.
T Consensus 16 ~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~ 95 (222)
T 1q9r_B 16 GSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNTLRAEDSAT 95 (222)
T ss_dssp CCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEECSCCGGGCEE
T ss_pred CEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEECcCCcccCeE
Confidence 4688999887654 7899999854 2211 110 0 000 1124677777543 457799999999999999
Q ss_pred EEEEEEeCC------CceEeEEEEEEc----CCcccccCCCCcEEEeCCCcEEEEeEeccC-CCC-eEEEEECCeEEEec
Q psy16425 68 YMCQVNTDP------MKSQVGYLEVVV----PPDILDYPTSTDMVIREGSNVTLKCAASGS-PKP-NITWRREGGELIAQ 135 (163)
Q Consensus 68 Y~C~~~~~~------~~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p-~v~W~~~~~~~~~~ 135 (163)
|.|.+.+.. .......|.|.. +|.+...+. ...+.+|+.+.|.|.+.|. |.| .+.|++++..+...
T Consensus 96 Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~--~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~ 173 (222)
T 1q9r_B 96 YYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAP--GSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVH 173 (222)
T ss_dssp EEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECC--CSCCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEE
T ss_pred EEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEccc--cccccCCCcEEEEEEEccEECCCCEEEEecCCeEcceE
Confidence 999996543 222345677764 233333221 1124579999999999985 888 99999998653110
Q ss_pred -------CCceEEeceEEEEcchhhh
Q psy16425 136 -------GNGQEDFPFFKRTKKKKKK 154 (163)
Q Consensus 136 -------~~~~~~~~~l~i~~v~~~~ 154 (163)
.........|.|..+..+|
T Consensus 174 ~~~~~~~~~~~~~~s~L~i~~~~~~d 199 (222)
T 1q9r_B 174 TFPAVLQSDLYTLSSSVTVPSSTWPS 199 (222)
T ss_dssp EEEEEEETTEEEEEEEEEEETTTTTT
T ss_pred eccccccCCcEEEEEEEEECchhcCC
Confidence 1111123467888877665
No 103
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.70 E-value=9.2e-16 Score=100.24 Aligned_cols=133 Identities=13% Similarity=0.223 Sum_probs=94.1
Q ss_pred ceeEEEeeeeccCCC--EEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCceE
Q psy16425 3 ARMLIEIGEMLMAES--TVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKSQ 80 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~--~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~ 80 (163)
..+.|.|...+.+.+ .+.|++ ++..+.. .... .....|.|. +.+|+|.|+|.+.+. ...
T Consensus 14 ~~v~l~C~~~~~~~p~~~~~W~k-~~~~l~~--------~~~~------~~~~~l~i~--~~~d~G~Y~C~~~n~--~~~ 74 (184)
T 3b5h_A 14 SKILLTCSLNDSATEVTGHRWLK-GGVVLKE--------DALP------GQKTEFKVD--SDDQWGEYSCVFLPE--PMG 74 (184)
T ss_dssp TEEEEEEEEESCSSCCCEEEEES-SSEEEEC--------TTCC------CSEEEEEEC--GGGCCEEEEEEEEST--TSC
T ss_pred CCEEEEEECCCCCCCceEEEEEe-CCEEeec--------cccc------CCcEEEEEe--chhhCeEEEEEEECC--cCc
Confidence 467888887776666 999999 5554421 1100 112356666 689999999999763 345
Q ss_pred eEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCC-CCeEEEEE---CCeEEEecC---CceE----EeceEEEEc
Q psy16425 81 VGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSP-KPNITWRR---EGGELIAQG---NGQE----DFPFFKRTK 149 (163)
Q Consensus 81 ~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p-~p~v~W~~---~~~~~~~~~---~~~~----~~~~l~i~~ 149 (163)
.+.|.|.++|.+...+ ....+.+|+.+.|.|.+.+.| .|.+.|++ ++..+.... +... ....|.|.+
T Consensus 75 ~~~l~V~~~P~~~~~~--~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~ 152 (184)
T 3b5h_A 75 TANIQLHGPPRVKAVK--SSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIEN 152 (184)
T ss_dssp EEEEEECCSCCCEESC--SEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECS
T ss_pred EEEEEEecCCceeecC--CCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEee
Confidence 6788888888877655 356788999999999999999 79999999 555543321 1111 124799999
Q ss_pred ch-hhhHh
Q psy16425 150 KK-KKKKK 156 (163)
Q Consensus 150 v~-~~~~~ 156 (163)
++ .+|.+
T Consensus 153 v~~~~d~G 160 (184)
T 3b5h_A 153 LNMEADPG 160 (184)
T ss_dssp CCTTTSSE
T ss_pred ccccccCc
Confidence 98 88865
No 104
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.69 E-value=1.2e-16 Score=106.80 Aligned_cols=150 Identities=17% Similarity=0.188 Sum_probs=96.0
Q ss_pred ceeEEEeeeecc-------CCCEEEEEEcCCc----eEEeeee----eEEecCCeEEEEeCC-CceEEEEEcccCCCCCe
Q psy16425 3 ARMLIEIGEMLM-------AESTVAWLRVDTQ----TILTIQT----HVITKNHRIGVTHSE-TKAWYLHIREVRESDRG 66 (163)
Q Consensus 3 ~~~~~~~~~~~~-------~~~~i~W~k~~~~----~~~~~~~----~~~~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G 66 (163)
.++.|.|..... +.+.|.||+.+.. .+..... ......+|+.+..+. .++++|.|.+++.+|+|
T Consensus 16 ~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~D~G 95 (214)
T 2zg1_A 16 LCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLSIGDARMEDTG 95 (214)
T ss_dssp CCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEEECSCCGGGCE
T ss_pred ccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEEEccCCHhhCc
Confidence 467888887644 5789999995431 1111100 011234677766542 34668999999999999
Q ss_pred EEEEEEEeCCCc-----eEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccC----CCCeEEEEECCeEEEecCC
Q psy16425 67 WYMCQVNTDPMK-----SQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGS----PKPNITWRREGGELIAQGN 137 (163)
Q Consensus 67 ~Y~C~~~~~~~~-----~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~----p~p~v~W~~~~~~~~~~~~ 137 (163)
.|.|.+.+.... ...+.|.|...+..+...... .+.+|+.+.|.|.+.+. |.|.+.|++++..+...
T Consensus 96 ~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~--~~~~G~~v~L~C~~~~~~~~~p~p~v~W~~~~~~~~~~-- 171 (214)
T 2zg1_A 96 SYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHFLE--PLESGRPTRLSCSLPGSCEAGPPLTFSWTGNALSPLDP-- 171 (214)
T ss_dssp EEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC--C--CCCTTCCEEEEEECTTCCSCSSCCEEEEESSTTSSSCS--
T ss_pred eEEEEEEcCCCceeeecCCceEEEEecCCCCCceecCc--cccCCCeEEEEEEeccCCCCCCCceEEEeCCCCccCCC--
Confidence 999999765311 135667777643221111111 25689999999999764 88999999998653221
Q ss_pred ceEEeceEEEEcchhhhHh
Q psy16425 138 GQEDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 138 ~~~~~~~l~i~~v~~~~~~ 156 (163)
.....+.|+|..+..+|.+
T Consensus 172 ~~~~~~~L~i~~~~~~~~g 190 (214)
T 2zg1_A 172 ETTRSSELTLTPRPEDHGT 190 (214)
T ss_dssp SCCCSSEEEECCCTTCCSC
T ss_pred CceeEEEEEEecccHHcCc
Confidence 1235567888888777753
No 105
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.69 E-value=2.2e-16 Score=107.86 Aligned_cols=131 Identities=20% Similarity=0.360 Sum_probs=85.8
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCC-c---eEEeee---eeEEe---cCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDT-Q---TILTIQ---THVIT---KNHRIGVTHSETKAWYLHIREVRESDRGWYMCQV 72 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~-~---~~~~~~---~~~~~---~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~ 72 (163)
.++.|.|...+.+.+.|.||+... . .+.... ..... ..+|+.+.....++++|.|.+++.+|+|.|.|.+
T Consensus 17 ~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 96 (246)
T 4dzb_B 17 TSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSFYICSA 96 (246)
T ss_dssp SCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred CcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEECCCCHHHCEEEEEEE
Confidence 468899988888999999998421 1 111111 11111 1267777654456789999999999999999999
Q ss_pred EeCC-----CceEeEEEEEEc------CCcccccCCCCcEEEeCCCcEEEEeEeccCCCC--eEEEEECCeEEEe
Q psy16425 73 NTDP-----MKSQVGYLEVVV------PPDILDYPTSTDMVIREGSNVTLKCAASGSPKP--NITWRREGGELIA 134 (163)
Q Consensus 73 ~~~~-----~~~~~~~l~v~~------~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p--~v~W~~~~~~~~~ 134 (163)
.+.. .......|.|.. +|.+..... ....+.+|+.+.|.|.+.+.|++ .+.|++++..+..
T Consensus 97 ~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~-~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~ 170 (246)
T 4dzb_B 97 RTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEP-SEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHS 170 (246)
T ss_dssp CCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECC-CHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECT
T ss_pred ecCCCCcceEEcCCEEEEEecCCCcccCCceEeecC-CchhccCCCcEEEEEEEccCcCCceEEEEEECCEECCC
Confidence 6432 122344566664 333322211 12234568999999999986654 8999999987743
No 106
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.69 E-value=5.2e-16 Score=103.68 Aligned_cols=151 Identities=13% Similarity=0.205 Sum_probs=92.9
Q ss_pred ceeEEEeeeeccC---CCEEEEEEcC-CceEEeee----eeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEe
Q psy16425 3 ARMLIEIGEMLMA---ESTVAWLRVD-TQTILTIQ----THVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNT 74 (163)
Q Consensus 3 ~~~~~~~~~~~~~---~~~i~W~k~~-~~~~~~~~----~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~ 74 (163)
.++.|.|...+.| .+.|.||+.+ +..+.... ........|+.... ..++++|.|.+++.+|+|.|.|.+.+
T Consensus 16 ~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~~~~ 94 (212)
T 1q0x_L 16 ETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSL-IGDKAALTITGAQTEDEAIYFCALWS 94 (212)
T ss_dssp CCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEE-ETTEEEEEESSCCGGGCEEEEEEEEC
T ss_pred CCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEe-eCCEEEEEECCCCccCCEEEEEEEec
Confidence 4688999988776 4789999953 22221100 00001235666554 23466899999999999999999976
Q ss_pred CCCc--eEeEEEEEE----cCCcccccCCCCcEEEeCCCcEEEEeEeccC-CCC-eEEEEECCeEEEecCC---ce----
Q psy16425 75 DPMK--SQVGYLEVV----VPPDILDYPTSTDMVIREGSNVTLKCAASGS-PKP-NITWRREGGELIAQGN---GQ---- 139 (163)
Q Consensus 75 ~~~~--~~~~~l~v~----~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p-~v~W~~~~~~~~~~~~---~~---- 139 (163)
.... .....|.|. .+|.+...+. .....+|+.+.|.|.+.+. |++ .+.|++++..+..... ..
T Consensus 95 ~~~~~~~~~~~l~V~~~~~~~P~v~~~~~--~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~ 172 (212)
T 1q0x_L 95 NNKLVFGGGTKLTVLGQPKSSPTVTLFPP--SSEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAGMETTQPSKQSN 172 (212)
T ss_dssp SSCEEECCCEEEEECCSCCBCCEEEEECC--CHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEECTT
T ss_pred CchhhcCCCeEEEEecCCCCCCeeEEeCC--CHHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCCeecCCceeCCC
Confidence 5321 233455553 2444433222 1123468899999999885 443 8999999987643211 00
Q ss_pred ---EEeceEEEEcchhhhHh
Q psy16425 140 ---EDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 140 ---~~~~~l~i~~v~~~~~~ 156 (163)
.....|.|..+..+|.+
T Consensus 173 g~~~~~s~L~i~~~~~~d~g 192 (212)
T 1q0x_L 173 NKYMASSYLTLTARAWERHS 192 (212)
T ss_dssp SCEEEEEEEEEEHHHHTTCC
T ss_pred CCEEEEEEEEEcHHHccCCC
Confidence 12246788887776654
No 107
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.69 E-value=1.1e-16 Score=112.55 Aligned_cols=154 Identities=15% Similarity=0.247 Sum_probs=101.3
Q ss_pred ceeEEEeeee-ccCCCEEEEEEcCCceEEeee------eeE--EecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEE
Q psy16425 3 ARMLIEIGEM-LMAESTVAWLRVDTQTILTIQ------THV--ITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVN 73 (163)
Q Consensus 3 ~~~~~~~~~~-~~~~~~i~W~k~~~~~~~~~~------~~~--~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~ 73 (163)
.++.|.|... +.+.+.|.|+|.++....... ... ....+|+.+.....++.+|.|.+++.+|+|.|+|.+.
T Consensus 15 ~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~ 94 (308)
T 4fom_A 15 KNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSDSGKYICKAV 94 (308)
T ss_dssp SCEEECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCCGGGCEEEEEEEE
T ss_pred CcEEEEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCCHHHCEEEEEEEe
Confidence 4688888754 455567999996543322111 001 1224566655544566789999999999999999997
Q ss_pred eCCC--ceEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEe-ccCCCCeEEEEECCeEEEecCCc-----eEEeceE
Q psy16425 74 TDPM--KSQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAA-SGSPKPNITWRREGGELIAQGNG-----QEDFPFF 145 (163)
Q Consensus 74 ~~~~--~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~p~v~W~~~~~~~~~~~~~-----~~~~~~l 145 (163)
+... ......+.+...|...............|+.+.|.|.+ .|.|.|.+.|++++..+...... ......|
T Consensus 95 n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~~~~~~~~~~~s~l 174 (308)
T 4fom_A 95 TFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSFPNETATIISQY 174 (308)
T ss_dssp ETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEEECTTSCEEEEEEE
T ss_pred eCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecCCcCCceEEEEECCcccccccceeeeecccccccc
Confidence 7533 33445666777666544333334445668899999986 58999999999998776433211 1233568
Q ss_pred EEEcchhhhHh
Q psy16425 146 KRTKKKKKKKK 156 (163)
Q Consensus 146 ~i~~v~~~~~~ 156 (163)
.|..+..+|.+
T Consensus 175 ~i~~~~~~d~g 185 (308)
T 4fom_A 175 KLFPTRFARGR 185 (308)
T ss_dssp EECCCGGGTTC
T ss_pred eEEeeeecCCc
Confidence 88888888765
No 108
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.69 E-value=3.1e-17 Score=116.54 Aligned_cols=143 Identities=20% Similarity=0.357 Sum_probs=97.0
Q ss_pred eeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEeE
Q psy16425 4 RMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQVG 82 (163)
Q Consensus 4 ~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~~ 82 (163)
.+.|.|...+.|.+.|.|++ ++..+. ...++..........+|.|.+++.+|+|.|+|.+.+. +.....+
T Consensus 140 ~v~l~C~~~g~p~~~v~W~~-~~~~~~--------~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~ 210 (334)
T 1ry7_B 140 TVRFRCPAAGNPTPSISWLK-NGREFR--------GEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTY 210 (334)
T ss_dssp CEEEECCCCCSSCCEEECCB-TTBCCC--------TTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEE
T ss_pred cEEEEEEccCCCCCeEEEEE-CCEECc--------ccccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEE
Confidence 57888999889999999999 554432 1111111111123448999999999999999999776 3344556
Q ss_pred EEEEEcCC----cccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEE----CCeEEEecCCce----E---------E
Q psy16425 83 YLEVVVPP----DILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRR----EGGELIAQGNGQ----E---------D 141 (163)
Q Consensus 83 ~l~v~~~p----~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~----~~~~~~~~~~~~----~---------~ 141 (163)
.|.|...+ .+.. .......+.+|+.+.|.|.+.+.|.|.+.|++ ++..+....... . .
T Consensus 211 ~l~V~~~~~~~p~~~~-~~~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (334)
T 1ry7_B 211 TLDVLERSPHRPILQA-GLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKE 289 (334)
T ss_dssp EEEEECCCCSSCBCCT-TCSCCEEEESSCCEEECCCCBCSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTT
T ss_pred EEEEecCCCCCCceEe-cCCCceEEeCCCCEEEEEEEecCCCCeEEEEECCcCCCccccCCCCeeEEEeecCcccccccc
Confidence 67776532 2221 11235678899999999999999999999999 565543322210 0 1
Q ss_pred eceEEEEcchhhhHh
Q psy16425 142 FPFFKRTKKKKKKKK 156 (163)
Q Consensus 142 ~~~l~i~~v~~~~~~ 156 (163)
...|.|.+++.+|.+
T Consensus 290 ~~~L~i~~v~~~d~G 304 (334)
T 1ry7_B 290 LEVLSLHNVTFEDAG 304 (334)
T ss_dssp CCCEEECSCCTTSCS
T ss_pred ccEEEEccCCHHHCE
Confidence 137999999998875
No 109
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.69 E-value=6.8e-17 Score=108.56 Aligned_cols=151 Identities=18% Similarity=0.293 Sum_probs=93.3
Q ss_pred ceeEEEeeeeccCC-----CEEEEEEcCCceE-Eee-eee--EEecCCeEEEEeCC--CceEEEEEcccCCCCCeEEEEE
Q psy16425 3 ARMLIEIGEMLMAE-----STVAWLRVDTQTI-LTI-QTH--VITKNHRIGVTHSE--TKAWYLHIREVRESDRGWYMCQ 71 (163)
Q Consensus 3 ~~~~~~~~~~~~~~-----~~i~W~k~~~~~~-~~~-~~~--~~~~~~r~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~ 71 (163)
.++.|.|...+.+. +.|.|++.+.... ... ... .....+|+.+.... .++.+|.|.+++.+|+|.|+|.
T Consensus 11 ~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~ 90 (222)
T 4i0k_A 11 TDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTDEGSYTCF 90 (222)
T ss_dssp SCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGGCSCEEEE
T ss_pred CCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCcccccCEEEEEE
Confidence 46888898776654 7899999653321 111 111 12335566654421 2356899999999999999999
Q ss_pred EEeCCCceEeEEEEEEcC---CcccccCCCCcEEEeCCCcEEEEeEe-ccCCCCeEEEEECCeEEEec-CCceE---Ee-
Q psy16425 72 VNTDPMKSQVGYLEVVVP---PDILDYPTSTDMVIREGSNVTLKCAA-SGSPKPNITWRREGGELIAQ-GNGQE---DF- 142 (163)
Q Consensus 72 ~~~~~~~~~~~~l~v~~~---p~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~p~v~W~~~~~~~~~~-~~~~~---~~- 142 (163)
+.+.+.....+.|.|..+ |.+...+ ...+.+|+.+.|.|.+ .+.|.|.+.|+++++..... ..... ..
T Consensus 91 ~~~~~~~~~~~~l~V~~~~~~p~i~~~~---~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~~~~~~~~~~ 167 (222)
T 4i0k_A 91 VSIQDFDSAAVSLQVAAPYSKPSMTLEP---NKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVTTSQMANERG 167 (222)
T ss_dssp EEECCCCCCCCCCCCCBCCCCCEEECCC--------CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEEEEEEECTTS
T ss_pred EEeCCCceEEEEEEEEcCCCCCcEEeCC---CceecCCceEEEEEecccccCCCeEEEEcCCCccCCCCcceeEEcCCCC
Confidence 976654445555666554 3333222 3456789999999999 78999999999854332211 11111 11
Q ss_pred --ceEEEEcchhhhHh
Q psy16425 143 --PFFKRTKKKKKKKK 156 (163)
Q Consensus 143 --~~l~i~~v~~~~~~ 156 (163)
..|.|.+++.+|.+
T Consensus 168 ~~~~l~i~~v~~~d~G 183 (222)
T 4i0k_A 168 LFDVHSVLRVVLGANG 183 (222)
T ss_dssp CEEEEEEEEEECCTTC
T ss_pred eEEEEEEEEEEeCCCC
Confidence 23778888888865
No 110
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.69 E-value=8.1e-16 Score=115.49 Aligned_cols=151 Identities=15% Similarity=0.170 Sum_probs=98.6
Q ss_pred ceeEEEeeeeccCCCEEEEEEcC-CceEE---ee-eeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCC
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVD-TQTIL---TI-QTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPM 77 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~-~~~~~---~~-~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~ 77 (163)
..+.|.|...+.|.+.|.||+.+ +..+. .. ........+|+... ...+..+|.|.+++.+|+|.|+|.+.+...
T Consensus 16 ~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~-~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g 94 (523)
T 2rcj_C 16 QRVTISCTGTSSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGS-KSGTSASLAISGLEAEDESDYYCASWNSSD 94 (523)
T ss_pred CcEEEEEEEeccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEe-cCCCEEEEEECCCChhhCEEEEEEEccCCC
Confidence 46889999988899999999953 22211 10 00011123566633 223466899999999999999999976421
Q ss_pred ----ceEeEEEEEE----cCCcccccCCCCcEEEeCCCcEEEEeEeccCCCC--eEEEEECCeEEEecCCce--------
Q psy16425 78 ----KSQVGYLEVV----VPPDILDYPTSTDMVIREGSNVTLKCAASGSPKP--NITWRREGGELIAQGNGQ-------- 139 (163)
Q Consensus 78 ----~~~~~~l~v~----~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p--~v~W~~~~~~~~~~~~~~-------- 139 (163)
....+.|.|. .+|.+...+. ...+.+|+.+.|.|.+.|.|++ .+.|++++..+.......
T Consensus 95 ~~~~~~~~~~l~V~~~~~~~P~~~~~~~--~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~ 172 (523)
T 2rcj_C 95 NSYVFGTGTKVTVLGQPKANPTVTLFPP--SSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNN 172 (523)
T ss_pred ccccccCceEEEeccCCCcCCeEEecCC--cccccCCCceEEEEEeccccCCceEEEEecCCCCCCCceEeccccccCCC
Confidence 2234566663 3454443332 3345679999999999988764 899999998764321111
Q ss_pred --EEeceEEEEcchhhhHh
Q psy16425 140 --EDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 140 --~~~~~l~i~~v~~~~~~ 156 (163)
.....|.|.++..+|++
T Consensus 173 ~~~~~s~L~i~~~~~~d~G 191 (523)
T 2rcj_C 173 KYAASSYLSLTPEQWKSHR 191 (523)
T ss_pred CEEEEEEEEEechhcCCCc
Confidence 11246889999888875
No 111
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.69 E-value=4.1e-16 Score=107.57 Aligned_cols=121 Identities=16% Similarity=0.284 Sum_probs=79.9
Q ss_pred ceeEEEeeee---ccCCCEEEEEEcCCce-----E-Eeeeee---EEecCCeEEEEeCC-CceEEEEEcccCCCCCeEEE
Q psy16425 3 ARMLIEIGEM---LMAESTVAWLRVDTQT-----I-LTIQTH---VITKNHRIGVTHSE-TKAWYLHIREVRESDRGWYM 69 (163)
Q Consensus 3 ~~~~~~~~~~---~~~~~~i~W~k~~~~~-----~-~~~~~~---~~~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~ 69 (163)
.++.|.|... +.+.+.|.|++.+... + ...... .....+|+.+.... .++.+|.|.+++.+|+|.|+
T Consensus 21 ~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 100 (268)
T 3mj6_A 21 ESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGSLLLQDVQKADEGIYT 100 (268)
T ss_dssp CCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCCEEECSCCGGGCEEEE
T ss_pred CcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEEEEECCCCHhHCEEEE
Confidence 4678888876 6778899999954321 1 111000 01123566654322 34568999999999999999
Q ss_pred EEEEeCC-CceEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEe---ccCCCCeEEEEEC
Q psy16425 70 CQVNTDP-MKSQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAA---SGSPKPNITWRRE 128 (163)
Q Consensus 70 C~~~~~~-~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~---~~~p~p~v~W~~~ 128 (163)
|.+.+.. .......+.+.+.+.. .....+.+|+++.|.|.+ .+.|.|.+.|+++
T Consensus 101 C~~~~~~~~~~~~~~~~l~V~~~~-----p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~ 158 (268)
T 3mj6_A 101 CEIRLKNESMVMKKPVELWVLPEE-----PRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFS 158 (268)
T ss_dssp EEEEETTCCCEEEEEEEEEEECCC-----CSEEEEETTCCEEECCBCEESSSSCCCEEEEEEE
T ss_pred EEEEecCCcceEEEEEEEEEeccC-----CCccccccCCcEEEEEEecCCCCCCccceEEEec
Confidence 9997652 3323334444433221 135678899999999999 5779999999984
No 112
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.69 E-value=7.2e-17 Score=106.20 Aligned_cols=127 Identities=14% Similarity=0.183 Sum_probs=83.4
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcc-cCCCCCeEEEEEEEeC-CCceE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIRE-VRESDRGWYMCQVNTD-PMKSQ 80 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~-v~~~d~G~Y~C~~~~~-~~~~~ 80 (163)
..+.|.|...+ +. .|.|+| ++..+... . +.+|.|.+ ++.+|+|.|+|.+.+. +....
T Consensus 15 ~~v~L~C~~~~-~~-~i~W~k-~g~~l~~~--------------~----~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~ 73 (186)
T 1jbj_A 15 TSVELTCPLDS-DE-NLKWEK-NGQELPQK--------------H----DKHLVLQDFSEVEDSGYYVCYTPASNKNTYL 73 (186)
T ss_dssp TEEEEECSSCC-CT-TCEEEE-TTEEECSC--------------C----CSEEEEESCCTTTSCEEEEEECSSCCCCCCE
T ss_pred cEEEEEEeCCC-CC-ceEEEE-CCEECCCC--------------C----CCEEEECCCCccccCEEEEEEEEeCCCcEEE
Confidence 46788888877 43 499999 56554210 1 12799999 9999999999999665 33233
Q ss_pred eEEEEEEc--CCcc----------------cc--cCCCCc---EEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCC
Q psy16425 81 VGYLEVVV--PPDI----------------LD--YPTSTD---MVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGN 137 (163)
Q Consensus 81 ~~~l~v~~--~p~~----------------~~--~~~~~~---~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~ 137 (163)
...+.+.. ++.. .. ...... ..+.+|+++.|.|.+ |.|.+.|++++..+....
T Consensus 74 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~- 149 (186)
T 1jbj_A 74 YLKARVGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL---TDKTIKWLKDGSIISPLN- 149 (186)
T ss_dssp EECCCCCSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS---SCSCEEEEETTEECCCSS-
T ss_pred EEEEEEecccccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeC---CCCeEEEEECCEECcccC-
Confidence 33333222 1110 00 000001 123489999999998 889999999999875332
Q ss_pred ceEEeceEEEEcchhhhHh
Q psy16425 138 GQEDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 138 ~~~~~~~l~i~~v~~~~~~ 156 (163)
..++.|.|.+++.+|++
T Consensus 150 --~~~~~L~i~~v~~~D~G 166 (186)
T 1jbj_A 150 --ATKNTWNLGNNAKDPRG 166 (186)
T ss_dssp --CCSSCCEEEETTSCCEE
T ss_pred --CCcceEEECCCCcCcCE
Confidence 25577999999998876
No 113
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.68 E-value=8.4e-16 Score=117.95 Aligned_cols=132 Identities=19% Similarity=0.314 Sum_probs=97.4
Q ss_pred eeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCC--ceEe
Q psy16425 4 RMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPM--KSQV 81 (163)
Q Consensus 4 ~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~--~~~~ 81 (163)
.+.|.|... .|.+.+.|++ ++..+. ...++.+... +..|.|.+++.+|+|.|+|.+.|... .+..
T Consensus 484 ~v~l~C~~~-~~~~~i~W~~-~g~~l~--------~~~~~~~~~~---~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~ 550 (642)
T 1e07_A 484 AVAFTCEPE-AQNTTYLWWV-NGQSLP--------VSPRLQLSNG---NRTLTLFNVTRNDARAYVCGIQNSVSANRSDP 550 (642)
T ss_pred eEEEEEECC-CCCcEEEEEE-CCEeCC--------CCCcEEEcCC---CcEEEEeecChhcCceEEEEeEcCCCCccCCC
Confidence 567778777 4889999999 555442 2334444332 23899999999999999999977632 2335
Q ss_pred EEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceEEeceEEEEcchhhhHh
Q psy16425 82 GYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQEDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 82 ~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~l~i~~v~~~~~~ 156 (163)
+.|.|..+|....... ....+.+|+.+.|.|.+.|.|.|.+.|+++|..+.. +..|.|.+++.+|.+
T Consensus 551 ~~l~V~~~p~~~~~~~-~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~i~~-------~~~L~i~~~~~~d~G 617 (642)
T 1e07_A 551 VTLDVLYGPDTPIISP-PDSSYLSGANLNLSCHSASNPSPQYSWRINGIPQQH-------TQVLFIAKITPNNNG 617 (642)
T ss_pred EEEEEEeCCCcceecC-CceeEEcCCcEEEEEEeccCCCCeEEEEECCEECcc-------CceEEECcccccCCe
Confidence 7888887665333222 356788999999999999999999999999987643 246888888888765
No 114
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.68 E-value=3.3e-15 Score=104.22 Aligned_cols=151 Identities=17% Similarity=0.209 Sum_probs=96.6
Q ss_pred ceeEEEeeeeccC--CCEEEEEEcCC-ceEE---eee------eeEEecCCeEEEEeCC-CceEEEEEcccCCCCCeEEE
Q psy16425 3 ARMLIEIGEMLMA--ESTVAWLRVDT-QTIL---TIQ------THVITKNHRIGVTHSE-TKAWYLHIREVRESDRGWYM 69 (163)
Q Consensus 3 ~~~~~~~~~~~~~--~~~i~W~k~~~-~~~~---~~~------~~~~~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~ 69 (163)
..+.|.|...+.+ .+.|.||+.+. .... ... .......+|+.+.... .+.++|.|.+++.+|+|.|.
T Consensus 42 ~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~ 121 (282)
T 1qok_A 42 TSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLSSLTSEDTAVYY 121 (282)
T ss_dssp CCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEECSCCGGGCEEEE
T ss_pred CeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEECcCChhhCEEEE
Confidence 4678888877664 68999999642 2111 100 0001124677766542 35679999999999999999
Q ss_pred EEEEeCCC------ceEeEEEEEEcCCc---------------ccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEE-
Q psy16425 70 CQVNTDPM------KSQVGYLEVVVPPD---------------ILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRR- 127 (163)
Q Consensus 70 C~~~~~~~------~~~~~~l~v~~~p~---------------~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~- 127 (163)
|.+.+... ....+.|.|...|. +...+ ....+.+|+++.|.|.+.+.| +.+.|++
T Consensus 122 C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p--~~~~v~~G~~v~L~C~~~~~~-~~v~W~k~ 198 (282)
T 1qok_A 122 CNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSP--AIMSASPGEKVTITCSASSSV-SYMHWFQQ 198 (282)
T ss_dssp EEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEEC--SEEEECTTCCEEEEEEESSCC-SCCEEEEE
T ss_pred EEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCC--CEEEEcCCCcEEEEEEecCCC-ceEEEEEE
Confidence 99976532 11334677766431 22212 356688999999999999988 8999999
Q ss_pred -CCeEEEe------------cCCceE----EeceEEEEcchhhhHh
Q psy16425 128 -EGGELIA------------QGNGQE----DFPFFKRTKKKKKKKK 156 (163)
Q Consensus 128 -~~~~~~~------------~~~~~~----~~~~l~i~~v~~~~~~ 156 (163)
++..+.. ..+... ....|+|.++..+|.+
T Consensus 199 ~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG 244 (282)
T 1qok_A 199 KPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAA 244 (282)
T ss_dssp CTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCE
Confidence 5543311 111111 2346999999999875
No 115
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.68 E-value=9.3e-16 Score=103.09 Aligned_cols=150 Identities=17% Similarity=0.275 Sum_probs=94.3
Q ss_pred ceeEEEeeeeccC--CCEEEEEEcC-Cce---EEeee--------eeEEecCCeEEEEeCC-CceEEEEEcccCCCCCeE
Q psy16425 3 ARMLIEIGEMLMA--ESTVAWLRVD-TQT---ILTIQ--------THVITKNHRIGVTHSE-TKAWYLHIREVRESDRGW 67 (163)
Q Consensus 3 ~~~~~~~~~~~~~--~~~i~W~k~~-~~~---~~~~~--------~~~~~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~ 67 (163)
.++.|.|...+.+ .+.|.||+.+ +.. +.... .......+|+.+..+. .++++|.|.+++.+|+|.
T Consensus 16 ~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~ 95 (220)
T 1pz5_B 16 GSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMNNLRAEDTGI 95 (220)
T ss_dssp CCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEE
T ss_pred CeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEccCCHHHCEE
Confidence 4688899887665 7899999953 221 11110 0001124677776543 356799999999999999
Q ss_pred EEEEEEeCCC----ceEeEEEEEEc----CCcccccCCCCcEEEeCCCcEEEEeEeccC-CCC-eEEEEECCeE----EE
Q psy16425 68 YMCQVNTDPM----KSQVGYLEVVV----PPDILDYPTSTDMVIREGSNVTLKCAASGS-PKP-NITWRREGGE----LI 133 (163)
Q Consensus 68 Y~C~~~~~~~----~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p-~v~W~~~~~~----~~ 133 (163)
|.|.+.+... ....+.|.|.. +|.+...+. ...+.+|+.+.|.|.+.+. |.| .+.|++++.. ..
T Consensus 96 Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~--~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~ 173 (220)
T 1pz5_B 96 YYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVP--GCSDTSGSSVTLGCLVKGYFPEPVTVKWNYGALSSGVRTV 173 (220)
T ss_dssp EEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECC--CSCCSCSSSEEEEEEEEEEBSSCCEEEEGGGTCCTTEEEC
T ss_pred EEEEEecCCcccceECCCEEEEEccCCCCCCeEEEccc--ccccCCCCcEEEEEEEEEEeCCCeEEEEecCCcccceEEc
Confidence 9999976531 11345677763 333333221 1234679999999999986 888 9999998863 11
Q ss_pred e---cCCceEEeceEEEEcchhhh
Q psy16425 134 A---QGNGQEDFPFFKRTKKKKKK 154 (163)
Q Consensus 134 ~---~~~~~~~~~~l~i~~v~~~~ 154 (163)
. ........+.|.|..+..++
T Consensus 174 ~~~~~~~~~~~~s~L~i~~~~~~~ 197 (220)
T 1pz5_B 174 SSVLQSGFYSLSSLVTVPSSTWPS 197 (220)
T ss_dssp CCEEETTEEEEEEEEEECGGGTTT
T ss_pred CCcccCCeEEEEEEEEEcchhcCC
Confidence 0 01111234567787776543
No 116
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.68 E-value=7.8e-16 Score=102.73 Aligned_cols=127 Identities=16% Similarity=0.256 Sum_probs=84.5
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCceEeE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKSQVG 82 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~ 82 (163)
..+.|.|.. |.+.|.|+| ++..+... .. .+.+|.|.+++.+|+|.|+|.+.+.. +...
T Consensus 19 ~~v~L~C~~---p~~~i~W~k-~g~~l~~~-----~~-----------~~~~L~i~~v~~~DsG~Y~C~~~~~~--s~~~ 76 (204)
T 1sy6_A 19 GSVLLTCDA---EAKNITWFK-DGKMIGFL-----TE-----------DKKKWNLGSNAKDPRGMYQCKGSQNK--SKPL 76 (204)
T ss_dssp SEEEEEECS---CSSEEEEEE-TTEEEEEE-----ES-----------SCCCEEEEEGGGCCEEEEEEESSSSC--CCCE
T ss_pred CeEEEEEcC---CCCEEEEEE-CCEECCCC-----CC-----------CCCeEEeCCCCcCCCEEEEEEecCCC--CeeE
Confidence 357888877 788999999 66555321 00 11279999999999999999974332 2223
Q ss_pred EEEEEc-------------------------------CCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeE
Q psy16425 83 YLEVVV-------------------------------PPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGE 131 (163)
Q Consensus 83 ~l~v~~-------------------------------~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~ 131 (163)
.+.+.. ++.+... +.....+|+++.|.|. +.|.|.+.|++++..
T Consensus 77 ~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---p~~v~~~G~~v~L~C~--g~p~p~i~W~k~~~~ 151 (204)
T 1sy6_A 77 QVYYRMGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQT---PYKVSISGTTVILTCP--QYPGSEILWQHNDKN 151 (204)
T ss_dssp EEEEEC------------------------------------CC---CCEEEEETTEEEEECS--CCCSSCEEEEETTEE
T ss_pred EEEEEEeccccccccccccccccccccccccccccccccceecC---CceeeecCCcEEEEcC--CCCCCceEEEECCEE
Confidence 333330 1111111 1222338999999999 789999999999988
Q ss_pred EEecCC---ceEEeceEEEEcc-hhhhHh
Q psy16425 132 LIAQGN---GQEDFPFFKRTKK-KKKKKK 156 (163)
Q Consensus 132 ~~~~~~---~~~~~~~l~i~~v-~~~~~~ 156 (163)
+..... ....++.|.|.+| +.+|.+
T Consensus 152 l~~~~~~~~~~~~~~~L~I~~v~~~~D~G 180 (204)
T 1sy6_A 152 IGGDEDDKNIGSDEDHLSLKEFSELEQSG 180 (204)
T ss_dssp ESCCTTCTTEEEETTEEEETTCCHHHHCE
T ss_pred CCCccCCceEecCCCEEEEeeCCccccCE
Confidence 754321 1235789999999 999876
No 117
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.68 E-value=6.1e-17 Score=115.31 Aligned_cols=144 Identities=11% Similarity=0.128 Sum_probs=100.9
Q ss_pred ceeEEEeeee-------ccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC
Q psy16425 3 ARMLIEIGEM-------LMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD 75 (163)
Q Consensus 3 ~~~~~~~~~~-------~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 75 (163)
..+.|.|... +.|.+.|.|++. +..+.... ....|+... .+ +|.|.+++.+|+|.|+|.+.+.
T Consensus 34 ~~v~L~C~~~~~~~~~~~~p~~~v~W~k~-~~~~~~~~----~~~~~~~~~-~~----~L~i~~v~~~D~G~Y~C~~~n~ 103 (339)
T 3o4o_C 34 EPVALRCPQVPYWLWASVSPRINLTWHKN-DSARTVPG----EEETRMWAQ-DG----ALWLLPALQEDSGTYVCTTRNA 103 (339)
T ss_dssp BCCEEECTTSCSSCCSTTSSCCBCCCEES-SCCSCCSC----CSSSCEEEE-TT----EEEESSBCTTCCEEEECCEEET
T ss_pred ccEEEEeccccccccccCCCCceEEEEEC-CCCcccCc----cccccEEee-CC----eEEECCCCcccCEEEEEEEECC
Confidence 3578888887 889999999994 44321100 113344432 22 8999999999999999999765
Q ss_pred -CCceEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeE-----eccCCCCeEEEEECCeEEEecCCce-E--EeceEE
Q psy16425 76 -PMKSQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCA-----ASGSPKPNITWRREGGELIAQGNGQ-E--DFPFFK 146 (163)
Q Consensus 76 -~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~-----~~~~p~p~v~W~~~~~~~~~~~~~~-~--~~~~l~ 146 (163)
+.....+.|.|...+............+.+|+.+.|.|. +.+.|.|.+.|++++..+....... . +.+.|.
T Consensus 104 ~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~L~ 183 (339)
T 3o4o_C 104 SYCDKMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKFLSVRGTTHLL 183 (339)
T ss_dssp TEEEEEEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSSEEECTTSSEEE
T ss_pred cceEEEEEEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCceeEEcCCcceEE
Confidence 334455677777766543211112456889999999999 7889999999999998775442222 1 225799
Q ss_pred EEcchhhhHh
Q psy16425 147 RTKKKKKKKK 156 (163)
Q Consensus 147 i~~v~~~~~~ 156 (163)
|.+++.+|.+
T Consensus 184 i~~v~~~d~G 193 (339)
T 3o4o_C 184 VHDVALEDAG 193 (339)
T ss_dssp ESSCCGGGCE
T ss_pred EcccCHhhCe
Confidence 9999998875
No 118
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.68 E-value=1.2e-16 Score=106.79 Aligned_cols=151 Identities=16% Similarity=0.227 Sum_probs=95.6
Q ss_pred ceeEEEeeeeccCCCEEEEEEcC-CceEEeee----eeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-C
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVD-TQTILTIQ----THVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-P 76 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~-~~~~~~~~----~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~ 76 (163)
.++.|.|...+.|.+.|.||+.+ +..+.... ........|+..... .+.++|.|.+++.+|+|.|+|.+.+. .
T Consensus 15 ~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~~~n~~~ 93 (212)
T 1nfd_E 15 ETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTS-GTTATLTISGAQPEDEAAYYCLSSYGDN 93 (212)
T ss_dssp SCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEE-TTEEEEEETTCCGGGCSEEEEEEEETTT
T ss_pred CcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEee-CCEEEEEECcCCcccCEEEEEEEEcccC
Confidence 46788898888888899999853 22221100 000012356665542 34668999999999999999999752 2
Q ss_pred C---ceEeEEEEEE----cCCcccccCCCCcEEEeCCCcEEEEeEeccC-CC-CeEEEEECCeEEEecCCc---------
Q psy16425 77 M---KSQVGYLEVV----VPPDILDYPTSTDMVIREGSNVTLKCAASGS-PK-PNITWRREGGELIAQGNG--------- 138 (163)
Q Consensus 77 ~---~~~~~~l~v~----~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-p~v~W~~~~~~~~~~~~~--------- 138 (163)
. ......|.|. .+|.+...+. ...+.+|+.+.|.|.+.+. |+ |.+.|++++..+......
T Consensus 94 ~~~~~~~~~~l~V~~~~~~~p~v~~~~~--~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~ 171 (212)
T 1nfd_E 94 NDLVFGSGTQLTVLRGPKSSPKVTVFPP--SPEELRTNKATLVCLVNDFYPGSATVTWKANGATINDGVKTTKPSKQGQN 171 (212)
T ss_dssp TEEEECCCEEEEEECCCCBCCEEECCCC--CHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSSCBCCCCBCSSSC
T ss_pred cccccCCceEEEEccCCCCCCEEEeeCC--chHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCCeecCCceecCCC
Confidence 1 1223456664 2344433222 2223578999999999886 55 799999999887543211
Q ss_pred eEEeceEEEEcchhhhHh
Q psy16425 139 QEDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 139 ~~~~~~l~i~~v~~~~~~ 156 (163)
....+.|.|.++..+|++
T Consensus 172 ~~~~s~L~i~~~~~~d~G 189 (212)
T 1nfd_E 172 YMTSSYLSLTADQWKSHN 189 (212)
T ss_dssp EEEEEBCCEEHHHHHTCS
T ss_pred ceEEEEEEEchhhcCCCC
Confidence 112345788888888765
No 119
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.68 E-value=7.3e-16 Score=104.79 Aligned_cols=152 Identities=19% Similarity=0.207 Sum_probs=98.0
Q ss_pred ceeEEEeeeeccC----CCEEEEEEcC-CceE--Eee--eeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEE
Q psy16425 3 ARMLIEIGEMLMA----ESTVAWLRVD-TQTI--LTI--QTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVN 73 (163)
Q Consensus 3 ~~~~~~~~~~~~~----~~~i~W~k~~-~~~~--~~~--~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~ 73 (163)
.++.|.|...+.| .+.|.|++.+ +... ... .........|+..... .+.++|.|.+++.+|+|.|.|.+.
T Consensus 17 ~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~~~ 95 (240)
T 1moe_A 17 QRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGS-RTDFTLIIDPVEADDVATYYCQQT 95 (240)
T ss_dssp SCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE-TTEEEEEESSCCGGGCEEEEEEEC
T ss_pred CCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEec-CCeEEEEEcCCChhhCEEEEEEEc
Confidence 4688999988887 8899999953 2211 110 0000112457776552 356789999999999999999996
Q ss_pred eCCC--ceEeEEEEEEcCC-----cccccCCCCcEEEeCCCcEEEEeEeccCCC--CeEEEEEC--CeEEE-----e---
Q psy16425 74 TDPM--KSQVGYLEVVVPP-----DILDYPTSTDMVIREGSNVTLKCAASGSPK--PNITWRRE--GGELI-----A--- 134 (163)
Q Consensus 74 ~~~~--~~~~~~l~v~~~p-----~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~--p~v~W~~~--~~~~~-----~--- 134 (163)
+... ......|.|..++ .+.... .....+.+|+++.|.|.+.+.|. +.+.|+++ +..+. .
T Consensus 96 n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~-~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~ 174 (240)
T 1moe_A 96 NEDPYTFGGGTKLEIKGGGSGGGGEVQLQQ-SGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPAN 174 (240)
T ss_dssp SSSSCCBCCCEEEEECCCSCCCCCCCEEEE-CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTT
T ss_pred cCCceeecCCEEEEEecCCCCCCceEEEeC-CCceEEeCCCcEEEEEEEcCccCCCCEEEEEEECCCCCcEEEEEEcccC
Confidence 6522 3345567776643 121111 13567889999999999998874 58999996 22211 0
Q ss_pred ---------cCCceEE------eceEEEEcchhhhHh
Q psy16425 135 ---------QGNGQED------FPFFKRTKKKKKKKK 156 (163)
Q Consensus 135 ---------~~~~~~~------~~~l~i~~v~~~~~~ 156 (163)
..+.... ...|+|.+++.+|++
T Consensus 175 ~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G 211 (240)
T 1moe_A 175 GNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTA 211 (240)
T ss_dssp TEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCE
T ss_pred CccccCccccccEEEEEcccCCEEEEEECcCCHHHCE
Confidence 1111111 146999999999875
No 120
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.68 E-value=2.5e-15 Score=114.07 Aligned_cols=153 Identities=16% Similarity=0.169 Sum_probs=104.1
Q ss_pred ceeEEEeeeeccCCC---EEEEEEcCCc----eEEeee-eeEEecCCeEEEEeC-CCceEEEEEcccCCCCCeEEEEEEE
Q psy16425 3 ARMLIEIGEMLMAES---TVAWLRVDTQ----TILTIQ-THVITKNHRIGVTHS-ETKAWYLHIREVRESDRGWYMCQVN 73 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~---~i~W~k~~~~----~~~~~~-~~~~~~~~r~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~~~ 73 (163)
..+.|.|...+.+.+ .|.|++.+.. .+.... .......+|+.+... ..+.++|.|.+++.+|+|.|+|.+.
T Consensus 16 ~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~~~ 95 (585)
T 2ocw_A 16 NSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLG 95 (585)
T ss_pred CcEEEEEeCCCCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEECCCCcccCEEEEEEcc
Confidence 467888888777544 8999995431 111111 111123457776654 3456789999999999999999996
Q ss_pred eC-CCceEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccC-CCCeEEEEECCeEEE----e---------cCCc
Q psy16425 74 TD-PMKSQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGS-PKPNITWRREGGELI----A---------QGNG 138 (163)
Q Consensus 74 ~~-~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p~v~W~~~~~~~~----~---------~~~~ 138 (163)
+. +..+..+.|.|..+|.+...+ ....+.+|+.+.|.|.+.+. |.+.+.|++++.... . ..+.
T Consensus 96 n~~~~~~~~~~l~V~~~p~~~~~~--~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~ 173 (585)
T 2ocw_A 96 INSRGLSFDVSLEVSQGPGLLNDT--KVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRI 173 (585)
T ss_pred cCCCCceEEEEEEEecCccccCCC--ccEEEEcCCCEEEEEEecCCCCCccEEEEECCCCCceEEecCCcccCccccCcE
Confidence 55 455666788888888776543 46678899999999999865 457799999876421 1 1111
Q ss_pred eE--Eec-----eEEEEcchhhhHhh
Q psy16425 139 QE--DFP-----FFKRTKKKKKKKKK 157 (163)
Q Consensus 139 ~~--~~~-----~l~i~~v~~~~~~~ 157 (163)
.. .+. .|.|.+++.+|.+.
T Consensus 174 ~~~~~~~~~~~~~L~I~~v~~~D~G~ 199 (585)
T 2ocw_A 174 RLDIQGTGQLLFSVVINQLRLSDAGQ 199 (585)
T ss_pred EEEeccCCCcEEEEEEccCChhHCeE
Confidence 11 121 79999999998763
No 121
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.68 E-value=2.9e-17 Score=117.73 Aligned_cols=136 Identities=12% Similarity=0.135 Sum_probs=97.4
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCe-EEEEEEEeC-CCceE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRG-WYMCQVNTD-PMKSQ 80 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G-~Y~C~~~~~-~~~~~ 80 (163)
..+.+.|...+.|.+.|.|++.++...... .+. ....+.+|.|.+++.+|+| .|+|.+.+. +....
T Consensus 174 ~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~--------~~~----~~~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~ 241 (347)
T 2ifg_A 174 DDVLLRCQVEGRGLEQAGWILTELEQSATV--------MKS----GGLPSLGLTLANVTSDLNRKNVTCWAENDVGRAEV 241 (347)
T ss_dssp CCEEEEEEEECSSCCCCCEEESCCCSSEEE--------CCC----CCSSEEEEEEESCCSTTTTCCEEECCEETTEECCE
T ss_pred CcEEEEEEEecCCCCEEEEEcCCceeeccc--------ccc----eecccceEEEeeCChHHCCCeEEEEEEcCCCCEEE
Confidence 368889999999999999999544322111 000 1123458999999999999 999999766 33344
Q ss_pred eEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCce-----------EEeceEEEEc
Q psy16425 81 VGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQ-----------EDFPFFKRTK 149 (163)
Q Consensus 81 ~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~-----------~~~~~l~i~~ 149 (163)
.+.+.|..+|.+ . .....+|+.+.|.|.+.|.|.|.+.|++++..+....... ...+.|+|.+
T Consensus 242 ~~~l~V~~~P~i-~-----~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~ 315 (347)
T 2ifg_A 242 SVQVNVSFPASV-Q-----LHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQ 315 (347)
T ss_dssp EECCCCBEEEEE-E-----ECCCEESSSEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECCCCTTCCCEEEEEEESS
T ss_pred EEEEEEcCCCee-e-----eccCccCceEEEEEEeeecCCCcEEEEeCCEECCCCcceeeEEEeecCCCcccceEEEECC
Confidence 555666666654 1 1123568999999999999999999999998876443322 1356799999
Q ss_pred chhhhHh
Q psy16425 150 KKKKKKK 156 (163)
Q Consensus 150 v~~~~~~ 156 (163)
++.+|++
T Consensus 316 v~~~d~G 322 (347)
T 2ifg_A 316 PTHVNNG 322 (347)
T ss_dssp CCGGGCE
T ss_pred CCcccCc
Confidence 9999875
No 122
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.68 E-value=2.8e-16 Score=107.78 Aligned_cols=151 Identities=18% Similarity=0.201 Sum_probs=94.8
Q ss_pred ceeEEEeeeeccC-----CCEEEEEEcC-CceEEe--e-e-eeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEE
Q psy16425 3 ARMLIEIGEMLMA-----ESTVAWLRVD-TQTILT--I-Q-THVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQV 72 (163)
Q Consensus 3 ~~~~~~~~~~~~~-----~~~i~W~k~~-~~~~~~--~-~-~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~ 72 (163)
.++.|.|...+.+ .+.|.|++.+ +..+.. . . ........|+..... .+.++|.|.+++.+|+|.|.|.+
T Consensus 54 ~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~a 132 (254)
T 2c1o_A 54 QPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGS-GTDFTLKISRVEAEDLGIYYCVQ 132 (254)
T ss_dssp SCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE-TTEEEEEESSCCGGGCSEEEEEE
T ss_pred CcEEEEeeccCcccccCCCCceEEEEeCCCCCceEEEEeccccCCCccceEEEecC-CCEEEEEECcCCcccCEEEEEEE
Confidence 4688999988877 4899999853 222110 0 0 000112356666542 34668999999999999999999
Q ss_pred EeCCCc--eEeEEEEEEc---CCcccccCCCCcEEEeCCCcEEEEeEecc-CCC-CeEEEEECCeEEEec-C--------
Q psy16425 73 NTDPMK--SQVGYLEVVV---PPDILDYPTSTDMVIREGSNVTLKCAASG-SPK-PNITWRREGGELIAQ-G-------- 136 (163)
Q Consensus 73 ~~~~~~--~~~~~l~v~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~-p~v~W~~~~~~~~~~-~-------- 136 (163)
.+.... .....+.|.. +|.+...+.. ....+|+.+.|.|.+.+ .|+ +.+.|++++..+... .
T Consensus 133 ~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~--~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~ 210 (254)
T 2c1o_A 133 GSHFPPTFGAGTKLELKRADAAPTVSIFPPS--SEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDS 210 (254)
T ss_dssp CSSSSCEEBCCEEEEECCCCBCCEEEEECCC--HHHHHTTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEEEECCCCT
T ss_pred EcCcceEecCCEEEEECCCCCCCeeEeecCC--hhhccCCcEEEEEEEecccCCCcEEEEEECCCcccCcceeccccccC
Confidence 665321 2223566653 3444432221 11235789999999988 444 469999999876433 0
Q ss_pred --CceEEeceEEEEcchhhhHh
Q psy16425 137 --NGQEDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 137 --~~~~~~~~l~i~~v~~~~~~ 156 (163)
........|.|.++..+|.+
T Consensus 211 ~~g~~~~~~~L~i~~~~~~d~G 232 (254)
T 2c1o_A 211 KDSTYSMSSTLTLTKDEYERHN 232 (254)
T ss_dssp TTCCEEEEEEEEEEHHHHHTCC
T ss_pred CCCcEEEEEEEEeccccccCCC
Confidence 00112457999999888865
No 123
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.68 E-value=1.1e-15 Score=117.29 Aligned_cols=132 Identities=17% Similarity=0.278 Sum_probs=95.3
Q ss_pred eeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCC--ceEe
Q psy16425 4 RMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPM--KSQV 81 (163)
Q Consensus 4 ~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~--~~~~ 81 (163)
.+.|.|...+ |.+.|.|++ ++..+. ...++..... ...|.|.+++.+|+|.|+|.+.+... .+..
T Consensus 128 ~v~l~C~~~~-p~~~v~W~~-~g~~l~--------~~~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~ 194 (642)
T 1e07_A 128 AVAFTCEPET-QDATYLWWV-NNQSLP--------VSPRLQLSNG---NRTLTLFNVTRNDTASYKCETQNPVSARRSDS 194 (642)
T ss_pred cEEEEEECCC-CCeeEEEEE-CCeECC--------CCCceEEcCC---CCEEEEeCCCcccCeeEEEEEecCCCCcccce
Confidence 3778888877 899999999 555442 2334443322 23899999999999999999976532 3445
Q ss_pred EEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceEEeceEEEEcchhhhHh
Q psy16425 82 GYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQEDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 82 ~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~l~i~~v~~~~~~ 156 (163)
+.|.|...|....... ....+.+|+.+.|.|.+.++|.|.+.|++++..+.. +..|.|.+++.+|.+
T Consensus 195 ~~l~V~~~p~~~~~~~-~~~~~~~G~~~~l~C~~~g~p~~~i~W~~~g~~i~~-------~~~L~i~~~~~~d~G 261 (642)
T 1e07_A 195 VILNVLYGPDAPTISP-LNTSYRSGENLNLSCHAASNPPAQYSWFVNGTFQQS-------TQELFIPNITVNNSG 261 (642)
T ss_pred EEEEEEeCCCCcEEec-CCcccccCCEEEEEEEcCCCCCcEEEEEECCeEccc-------CCceEEecccccCCe
Confidence 6778876665433222 245678899999999999999999999999987632 245777777777765
No 124
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.67 E-value=4.2e-16 Score=106.93 Aligned_cols=151 Identities=19% Similarity=0.233 Sum_probs=94.3
Q ss_pred ceeEEEeeeeccC-----CCEEEEEEcC-CceE--Eeee--eeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEE
Q psy16425 3 ARMLIEIGEMLMA-----ESTVAWLRVD-TQTI--LTIQ--THVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQV 72 (163)
Q Consensus 3 ~~~~~~~~~~~~~-----~~~i~W~k~~-~~~~--~~~~--~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~ 72 (163)
.++.|.|...+.+ .+.|.||+.+ +... .... .......+|+.... ..++++|.|.+++.+|+|.|.|.+
T Consensus 50 ~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~~ 128 (252)
T 3bkj_L 50 EQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSG-SGTDFTLRISRVEAEDLGVYYCFQ 128 (252)
T ss_dssp SCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ETTEEEEEESSCCGGGCEEEEEEE
T ss_pred CcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEc-cCCEEEEEECCCCcccCEEEEEEE
Confidence 4688999988777 6899999954 2211 1100 00011245666654 235678999999999999999999
Q ss_pred EeCCCc--eEeEEEEEEc---CCcccccCCCCcEEEeCCCcEEEEeEecc-CCCC-eEEEEECCeEEEec----CCce--
Q psy16425 73 NTDPMK--SQVGYLEVVV---PPDILDYPTSTDMVIREGSNVTLKCAASG-SPKP-NITWRREGGELIAQ----GNGQ-- 139 (163)
Q Consensus 73 ~~~~~~--~~~~~l~v~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p-~v~W~~~~~~~~~~----~~~~-- 139 (163)
.+.... .....|.|.. +|.+...+.. ....+|+.+.|.|.+.+ .|++ .+.|++++..+... ....
T Consensus 129 ~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~--~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~ 206 (252)
T 3bkj_L 129 ASLVPLTFGAGTKLELKRADAAPTVSIFPPS--SEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDS 206 (252)
T ss_dssp CSBSSCEECCCEEEEECCCCBCCEEEEECCC--HHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEEECSSEEEEECCCCT
T ss_pred EcCCccEECCCEEEEEeCCCcCcEEEEeCCC--hhhcCCCcEEEEEEEeeEeCCCcEEEEEECCeecCCCeeeecCcccC
Confidence 655321 2234566653 3444332221 11336889999999988 4554 79999999876432 0000
Q ss_pred -----EEeceEEEEcchhhhHh
Q psy16425 140 -----EDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 140 -----~~~~~l~i~~v~~~~~~ 156 (163)
.....|.|..+..+|++
T Consensus 207 ~~g~~~~~s~L~i~~~~~~d~g 228 (252)
T 3bkj_L 207 KDSTYSMSSTLTLTKDEYERHN 228 (252)
T ss_dssp TTCCEEEEEEEEEEHHHHHHCC
T ss_pred CCCCEEEEEEEEEcchhccCCC
Confidence 12245889888887765
No 125
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.67 E-value=1e-15 Score=106.05 Aligned_cols=129 Identities=19% Similarity=0.371 Sum_probs=82.5
Q ss_pred ceeEEEeeeeccCCCEEEEEEcC-CceE---Eeee-eeEEec---CC-eEEEEeCCCceEEEEEcccCCCCCeEEEEEEE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVD-TQTI---LTIQ-THVITK---NH-RIGVTHSETKAWYLHIREVRESDRGWYMCQVN 73 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~-~~~~---~~~~-~~~~~~---~~-r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~ 73 (163)
.++.|.|.... +.+.|.||+.. +... .... ...... .+ |+.+.....++++|.|.+++.+|+|.|.|.+.
T Consensus 43 ~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~ 121 (270)
T 3qib_D 43 QKAKMRCIPEK-GHPVVFWYQQNKNNEFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDSALYLCASS 121 (270)
T ss_dssp SCEEEEEECCT-TCCEEEEEEECTTCCEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGGGCEEEEEEEE
T ss_pred CCEEEEEEecC-CCceEEEEEECCCCCcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCHhHCeEEEEEEe
Confidence 46788887654 77899999843 2111 1111 000011 11 77777655567899999999999999999996
Q ss_pred eCC-----CceEeEEEEEEc------CCcccccCCCCcEEEeCCCcEEEEeEecc-CCCC-eEEEEECCeEEE
Q psy16425 74 TDP-----MKSQVGYLEVVV------PPDILDYPTSTDMVIREGSNVTLKCAASG-SPKP-NITWRREGGELI 133 (163)
Q Consensus 74 ~~~-----~~~~~~~l~v~~------~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p-~v~W~~~~~~~~ 133 (163)
+.. .......|.|.. +|.+...+. ....+.+|+.+.|.|.+.+ .|.| .+.|+++|..+.
T Consensus 122 ~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~-~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~ 193 (270)
T 3qib_D 122 LNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAVFEP-SEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVH 193 (270)
T ss_dssp SCTTCCCCEECCCEEEEEESCSTTCBCCEEEEEEC-CHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEEC
T ss_pred cCCCccceEECCcEEEEEccccccccCCceEEECC-CccccccCCceEEEEEecceeCCCeEEEEEECCEECC
Confidence 431 122334667765 333222111 1222345899999999988 6767 799999998874
No 126
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.67 E-value=1e-15 Score=105.91 Aligned_cols=129 Identities=19% Similarity=0.312 Sum_probs=84.1
Q ss_pred ceeEEEeeeeccCCCEEEEEEcC-CceE---Eee-eeeEEec---C-CeEEEEeCCCceEEEEEcccCCCCCeEEEEEEE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVD-TQTI---LTI-QTHVITK---N-HRIGVTHSETKAWYLHIREVRESDRGWYMCQVN 73 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~-~~~~---~~~-~~~~~~~---~-~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~ 73 (163)
.++.|.|... .+.+.|.||+.. +... ... ....... . +|+.+.....++++|.|.+++.+|+|.|.|.+.
T Consensus 42 ~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~ 120 (268)
T 3pl6_D 42 KYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQRTERGDSAVYLCATS 120 (268)
T ss_dssp CCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEECSCCGGGCEEEEEEEE
T ss_pred CCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEECCCCcccCEEEEEEEe
Confidence 4678888765 678899999942 1111 111 1111111 1 788877765567899999999999999999997
Q ss_pred eC---CCceEeEEEEEEc------CCcccccCCCCcEEEeCCCcEEEEeEeccCCC-C-eEEEEECCeEEE
Q psy16425 74 TD---PMKSQVGYLEVVV------PPDILDYPTSTDMVIREGSNVTLKCAASGSPK-P-NITWRREGGELI 133 (163)
Q Consensus 74 ~~---~~~~~~~~l~v~~------~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~-p-~v~W~~~~~~~~ 133 (163)
+. ........|.|.. +|.+..... ....+.+|+.+.|.|.+.+.|+ | .+.|+++|..+.
T Consensus 121 ~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~-~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~~~g~~l~ 190 (268)
T 3pl6_D 121 ALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEP-SEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVH 190 (268)
T ss_dssp SSSSSCEECCCEEEEEESCGGGCBCCEEEEECC-CHHHHHHHSEEEEEEEEEEEBSSCEEEEEEESSSEEC
T ss_pred cCCCceeeCCcEEEEEecCcccccCCceEEeCC-CcccccCCCceEEEEEECcccCCCeEEEEEECCEECC
Confidence 53 1223344666665 333322211 1223446899999999998554 4 899999998874
No 127
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.67 E-value=2.4e-15 Score=103.14 Aligned_cols=126 Identities=18% Similarity=0.199 Sum_probs=95.1
Q ss_pred ceeEEEeeeeccCCC-EEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCceEe
Q psy16425 3 ARMLIEIGEMLMAES-TVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~-~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~ 81 (163)
..+.|.|...+.|.+ .+.|++ ++..+.. . ...|.|.+++.+|+|.|+|.+.+. ..+..
T Consensus 17 ~~v~l~C~~~~~~~~~~~~W~~-~g~~~~~--------~-----------~~~l~i~~~~~~d~G~Y~C~~~~~-~~s~~ 75 (262)
T 3rjd_A 17 ETVTLHCEVLHLPGSSSTQWFL-NGTATQT--------S-----------TPSYRITSASVNDSGEYRCQRGLS-GRSDP 75 (262)
T ss_dssp CCEEEEEECSSCCCTTCEEEEE-TTEECSC--------C-----------SSEEEESSCCGGGCEEEEEEESSS-CCCCC
T ss_pred CeEEEEEECCCCCCCceEEEEE-CCEEeec--------c-----------CCeEEEecCCcccCeEEEEEEecC-Ccccc
Confidence 368889998888887 999999 5554311 1 127999999999999999999543 34456
Q ss_pred EEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEe-ccCCCCeEEEEECCeEEEecCCceEEeceEEEEcchhhhHh
Q psy16425 82 GYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAA-SGSPKPNITWRREGGELIAQGNGQEDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 82 ~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~p~v~W~~~~~~~~~~~~~~~~~~~l~i~~v~~~~~~ 156 (163)
+.+.|..++.....+ ...+.+|+.+.|.|.+ .+.|.+.+.|++++..+... ..+..|.|.+++.+|.+
T Consensus 76 ~~l~v~~~~~~~~~~---~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~----~~~~~l~i~~~~~~d~G 144 (262)
T 3rjd_A 76 IQLEIHRGWLLLQVS---SRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFF----HWNSNLTILKTNISHNG 144 (262)
T ss_dssp EEEEEECSSEEEEES---CSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEE----EECCCEEESSCCGGGCE
T ss_pred EEEEEeccceEecCC---CeEEecCCeEEEEEEccCCCCCceEEEEECCcccccc----CCCCeEEEEECChhhCE
Confidence 677777665443322 4467889999999999 67888999999999887433 23567899999888865
No 128
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.67 E-value=1.6e-15 Score=101.31 Aligned_cols=150 Identities=17% Similarity=0.213 Sum_probs=93.6
Q ss_pred ceeEEEeeeeccC--CCEEEEEEcC-CceEE---eee-----eeEEecCCeEEEEeCC-CceEEEEEcccCCCCCeEEEE
Q psy16425 3 ARMLIEIGEMLMA--ESTVAWLRVD-TQTIL---TIQ-----THVITKNHRIGVTHSE-TKAWYLHIREVRESDRGWYMC 70 (163)
Q Consensus 3 ~~~~~~~~~~~~~--~~~i~W~k~~-~~~~~---~~~-----~~~~~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C 70 (163)
.++.|.|...+.+ .+.|.|++.+ +.... ... .......+|+.+.... .++++|.|.+++.+|+|.|.|
T Consensus 16 ~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 95 (210)
T 3d9a_H 16 QTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYC 95 (210)
T ss_dssp SCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEE
T ss_pred CcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCCcccCEEEEE
Confidence 4688999887764 4899999853 22211 100 0001134677776543 246799999999999999999
Q ss_pred EEEeCCCceEeEEEEEEc----CCcccccCCCCcEEEeCCCcEEEEeEeccC-CCC-eEEEEECCeEEE--ecCCc----
Q psy16425 71 QVNTDPMKSQVGYLEVVV----PPDILDYPTSTDMVIREGSNVTLKCAASGS-PKP-NITWRREGGELI--AQGNG---- 138 (163)
Q Consensus 71 ~~~~~~~~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p-~v~W~~~~~~~~--~~~~~---- 138 (163)
.+.+.........|.|.. +|.+...+. ...+.+|+.+.|.|.+.+. |.| .+.|++++..+. .....
T Consensus 96 ~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~--~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~ 173 (210)
T 3d9a_H 96 ANWDGDYWGQGTLVTVSAAKTTPPSVYPLAP--GSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSD 173 (210)
T ss_dssp EETTSSCBCCCEEEEECCCCCBCCEEEEECC--TTSCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETT
T ss_pred EEecCcccccceEEEeccCCCCCCEEEEecC--CcccccCCcEEEEEEEeeEecCCcEEEEeeCCcccceEEcCCccCCC
Confidence 996543222335666653 333333221 1224679999999999986 888 999999987531 11111
Q ss_pred -eEEeceEEEEcchhhh
Q psy16425 139 -QEDFPFFKRTKKKKKK 154 (163)
Q Consensus 139 -~~~~~~l~i~~v~~~~ 154 (163)
......|.|..+..+|
T Consensus 174 ~~~~~s~L~i~~~~~~~ 190 (210)
T 3d9a_H 174 LYTLSSSVTVPSSTWPS 190 (210)
T ss_dssp EEEEEEEEEEEGGGTTT
T ss_pred cEEEEEEEEEcHHHcCC
Confidence 1123467888777644
No 129
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.67 E-value=8.3e-16 Score=106.91 Aligned_cols=152 Identities=18% Similarity=0.221 Sum_probs=95.4
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCC-c---eEEeee-eeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCC
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDT-Q---TILTIQ-THVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPM 77 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~-~---~~~~~~-~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~ 77 (163)
.++.|.|...+.|.+.|.||+.+. . .+.... ........|+..... .+.++|.|.+++.+|+|.|.|.+.+...
T Consensus 28 ~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v~~~DsG~Y~C~~~n~~~ 106 (276)
T 3auv_A 28 DRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGS-GTDFTLTISSLQPEDFATYYCQQHYTTP 106 (276)
T ss_dssp CCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE-TTEEEEEESSCCGGGCEEEEEEECSSSS
T ss_pred CCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEecc-CCeEEEEEccCChhhCEEEEEEEecCCc
Confidence 468899999888899999999542 1 111110 000112457766542 3466899999999999999999966421
Q ss_pred --ceEeEEEEEEcCCc-------------ccccCCCCcEEEeCCCcEEEEeEeccCC--CCeEEEEECC--eEE--Ee--
Q psy16425 78 --KSQVGYLEVVVPPD-------------ILDYPTSTDMVIREGSNVTLKCAASGSP--KPNITWRREG--GEL--IA-- 134 (163)
Q Consensus 78 --~~~~~~l~v~~~p~-------------~~~~~~~~~~~~~~g~~~~l~C~~~~~p--~p~v~W~~~~--~~~--~~-- 134 (163)
......|.|...|. +....+ ....+.+|+++.|.|.+.+.| .+.+.|++++ ..+ ..
T Consensus 107 ~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p-~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~g~~~~~l~~~ 185 (276)
T 3auv_A 107 PTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVES-GGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKCLEWVAGI 185 (276)
T ss_dssp CCCCCCEEEEC-----------------CCEEEEE-CCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEE
T ss_pred ccccCCEEEEEecCCCccccccccccCcceEEECC-CceEecCCCeEEEEEEecCccCCCCEEEEEEcCCCCCcEEEEEE
Confidence 23335666655431 211111 356788999999999999876 5899999963 211 10
Q ss_pred -------------cCCceEE------eceEEEEcchhhhHh
Q psy16425 135 -------------QGNGQED------FPFFKRTKKKKKKKK 156 (163)
Q Consensus 135 -------------~~~~~~~------~~~l~i~~v~~~~~~ 156 (163)
..+.... ...|+|.+++.+|++
T Consensus 186 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG 226 (276)
T 3auv_A 186 TPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTA 226 (276)
T ss_dssp CGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCE
T ss_pred eccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCE
Confidence 1111111 137999999999875
No 130
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.67 E-value=3.8e-16 Score=112.34 Aligned_cols=140 Identities=16% Similarity=0.220 Sum_probs=95.8
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeE-----EecCCeEEEEeC--CCceEEEEEcccCCCCCeEEEEEEEeC
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHV-----ITKNHRIGVTHS--ETKAWYLHIREVRESDRGWYMCQVNTD 75 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~-----~~~~~r~~~~~~--~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 75 (163)
.++.|.|...+.|.+.|.|++.+...+....... .....|+.+... ..++.+|.|.+++.+|+|.|+|.+.+.
T Consensus 10 ~~v~L~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~ 89 (363)
T 1wio_A 10 DTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVEDQ 89 (363)
T ss_dssp SCEEECCCCTTCSSCCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSCCGGGCEEEEEEETTE
T ss_pred CeEEEEEEecCCCceEEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCCCHHHCEEEEEEEEEC
Confidence 4688999988899999999995433232111100 012345544321 113447999999999999999999544
Q ss_pred CCceEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceEEeceEEEEcchhhhH
Q psy16425 76 PMKSQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQEDFPFFKRTKKKKKKK 155 (163)
Q Consensus 76 ~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~l~i~~v~~~~~ 155 (163)
...+.|.|.. +...+ ...+.+|+++.|.|.+.+.|.|.+.|++++..+. .....|.|.+++.+|+
T Consensus 90 ---~~~~~l~V~~---~~~~~---~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~------~~~~~L~i~~v~~~d~ 154 (363)
T 1wio_A 90 ---KEEVQLLVFG---LTANS---DTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNI------QGGKTLSVSQLELQDS 154 (363)
T ss_dssp ---EEEEEEEEEE---EEESS---CSSEESBSCEEEEEECCTTCCCCEEEECSSSCEE------EESSEEEECSBCGGGC
T ss_pred ---CCcEEEEEEe---CCCCC---ceEEecCCCEEEEEEcCCCCCCeEEEEcCCCccc------ccceEEEEeeCChhcC
Confidence 2345555553 22222 2246789999999999999999999999986642 3557799999999987
Q ss_pred hh
Q psy16425 156 KK 157 (163)
Q Consensus 156 ~~ 157 (163)
+.
T Consensus 155 G~ 156 (363)
T 1wio_A 155 GT 156 (363)
T ss_dssp EE
T ss_pred CE
Confidence 63
No 131
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.67 E-value=4.6e-16 Score=104.28 Aligned_cols=151 Identities=14% Similarity=0.192 Sum_probs=91.5
Q ss_pred ceeEEEee-eecc-CCCEEEEEEcCC-ceEE--ee--eeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC
Q psy16425 3 ARMLIEIG-EMLM-AESTVAWLRVDT-QTIL--TI--QTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD 75 (163)
Q Consensus 3 ~~~~~~~~-~~~~-~~~~i~W~k~~~-~~~~--~~--~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 75 (163)
.++.|.|. ..+. +.+.|.|++.+. .... .. .........|+.... ..++++|.|.+++.+|+|.|.|.+.+.
T Consensus 16 ~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 94 (216)
T 2xzc_L 16 QKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSK-SGTSATLGITGLQTGDEADYYCGTWDS 94 (216)
T ss_dssp CCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEE-ETTEEEEEECSCCGGGCEEEEEEEECT
T ss_pred CeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEec-cCCEEEEEECCCCcccCEEEEEEEEeC
Confidence 46888888 3433 368999999542 2111 00 000011235666554 234678999999999999999999765
Q ss_pred CC---ceEeEEEEEEc---CCcccccCCCCcEEEeCCCcEEEEeEecc-CCCC-eEEEEECCeEEEec----CCce----
Q psy16425 76 PM---KSQVGYLEVVV---PPDILDYPTSTDMVIREGSNVTLKCAASG-SPKP-NITWRREGGELIAQ----GNGQ---- 139 (163)
Q Consensus 76 ~~---~~~~~~l~v~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p-~v~W~~~~~~~~~~----~~~~---- 139 (163)
.. ......|.|.. +|.+...+.. ....+|+.+.|.|.+.+ .|+| .+.|++++..+... ....
T Consensus 95 ~~~~~~~~~~~l~V~~~~~~P~v~~~~~~--~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~ 172 (216)
T 2xzc_L 95 SLNPVFGGGTKLEIKRTVAAPSVFIFPPS--DEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKD 172 (216)
T ss_dssp TSCEEEBCCEEEEECCCCBCCEEEEECCC--HHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCCCTTT
T ss_pred CCcceECCCEEEEEcCCCCCCceEEeCCC--hhhccCCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeEecCcccCCC
Confidence 43 12234566642 3444332221 11235889999999987 5665 89999999876433 0000
Q ss_pred ---EEeceEEEEcchhhhHh
Q psy16425 140 ---EDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 140 ---~~~~~l~i~~v~~~~~~ 156 (163)
.....|.|..+..+|++
T Consensus 173 g~~~~~s~L~i~~~~~~d~g 192 (216)
T 2xzc_L 173 STYSLSSTLTLSKADYEKHK 192 (216)
T ss_dssp CCEEEEEEEEEEHHHHTTCC
T ss_pred CCEEEEEEEEECHHHhCCCC
Confidence 12236888888877754
No 132
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.67 E-value=8.6e-16 Score=108.88 Aligned_cols=154 Identities=12% Similarity=0.211 Sum_probs=100.3
Q ss_pred ceeEEEeeeecc----CCCEEEEEEcCCceEEeee--------eeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEE
Q psy16425 3 ARMLIEIGEMLM----AESTVAWLRVDTQTILTIQ--------THVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMC 70 (163)
Q Consensus 3 ~~~~~~~~~~~~----~~~~i~W~k~~~~~~~~~~--------~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 70 (163)
.++.|.|...+. +.+.|.|++.+........ .......+|+.+.....++.+|.|.+++.+|+|.|+|
T Consensus 30 ~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 109 (331)
T 3u83_A 30 TDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIRLSRLELEDEGVYIC 109 (331)
T ss_dssp CCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSBCCEEECSCCGGGCEEEEE
T ss_pred CCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCCceEEEcccCcccCcEEEE
Confidence 467888887665 6678999994322111100 0011235677766444456689999999999999999
Q ss_pred EEEeC--CCceEeEEEEEEcCCcccccCCCCcEEEeCC---CcEEEEeE-eccCCCCeEEEEECCe--EEEe----cCCc
Q psy16425 71 QVNTD--PMKSQVGYLEVVVPPDILDYPTSTDMVIREG---SNVTLKCA-ASGSPKPNITWRREGG--ELIA----QGNG 138 (163)
Q Consensus 71 ~~~~~--~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g---~~~~l~C~-~~~~p~p~v~W~~~~~--~~~~----~~~~ 138 (163)
.+.+. +.....+.|.|..+|.+..........+.+| +.+.|.|. +.+.|.|.+.|++++. .... ....
T Consensus 110 ~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~ 189 (331)
T 3u83_A 110 EFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQEIRNPNGT 189 (331)
T ss_dssp EEEEETTEEEEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEESSCCEEEEEEEECTTSC
T ss_pred EEEecCCCccEEEEEEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCCceEEEEcCCCCccccceeECCCCc
Confidence 96433 3445567788888887644333346678888 77999998 7799999999998532 2111 1111
Q ss_pred eEEeceEEEEcchhhhHh
Q psy16425 139 QEDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 139 ~~~~~~l~i~~v~~~~~~ 156 (163)
......|.|..+..+|.+
T Consensus 190 ~~~~~~L~i~~~~~~d~G 207 (331)
T 3u83_A 190 VTVISRYRLVPSREAHQQ 207 (331)
T ss_dssp EEEEEEEEECCCGGGTTC
T ss_pred EEEEEEEEEEeccccCCC
Confidence 123356777777887765
No 133
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.67 E-value=9.2e-16 Score=103.00 Aligned_cols=127 Identities=19% Similarity=0.301 Sum_probs=85.3
Q ss_pred ceeEEEeeeeccC--CCEEEEEEcC-CceEEeee-------ee--EEecCCeEEEEeCC-CceEEEEEcccCCCCCeEEE
Q psy16425 3 ARMLIEIGEMLMA--ESTVAWLRVD-TQTILTIQ-------TH--VITKNHRIGVTHSE-TKAWYLHIREVRESDRGWYM 69 (163)
Q Consensus 3 ~~~~~~~~~~~~~--~~~i~W~k~~-~~~~~~~~-------~~--~~~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~ 69 (163)
.++.|.|...+.+ .+.|.||+.+ +..+.... .. .....+|+.+.... .++++|.|.+++.+|+|.|.
T Consensus 16 ~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 95 (219)
T 1c1e_H 16 ETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNLKNEDMATYF 95 (219)
T ss_dssp CCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSCCGGGCEEEE
T ss_pred CcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCCCcccCEEEE
Confidence 4688889887654 7899999963 33221110 00 01234677776542 34679999999999999999
Q ss_pred EEEEeCCC-----ceEeEEEEEEcC----CcccccCCCCcEEEeCCCcEEEEeEecc-CCCC-eEEEEECCeE
Q psy16425 70 CQVNTDPM-----KSQVGYLEVVVP----PDILDYPTSTDMVIREGSNVTLKCAASG-SPKP-NITWRREGGE 131 (163)
Q Consensus 70 C~~~~~~~-----~~~~~~l~v~~~----p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p-~v~W~~~~~~ 131 (163)
|.+.+... ......|.|... |.+...+. ...+.+|+.+.|.|.+.+ .|.| .+.|++++..
T Consensus 96 C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~--~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~ 166 (219)
T 1c1e_H 96 CARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAP--GSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLS 166 (219)
T ss_dssp EEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECC--CSSSCCSSEEEEEEEEEEEBSSCCEEEEGGGTBC
T ss_pred EEEeccCcccceeecCceEEEEecCCCCCCeEEEecC--ccccccCCeEEEEEEcccccCCCeEEEEEeCCcc
Confidence 99976531 123456666653 33332221 123467999999999998 8999 9999999875
No 134
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.67 E-value=1.8e-15 Score=104.06 Aligned_cols=151 Identities=20% Similarity=0.277 Sum_probs=97.1
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCC-ce---EEee--eeeEEecCCeEEEEe-CCCceEEEEEcccCCCCCeEEEEEEEeC
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDT-QT---ILTI--QTHVITKNHRIGVTH-SETKAWYLHIREVRESDRGWYMCQVNTD 75 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~-~~---~~~~--~~~~~~~~~r~~~~~-~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 75 (163)
..+.|.|...+.+.+.|.||+... .. +... ........+|+.+.. .....++|.|.+++.+|+|.|.|.+.+.
T Consensus 19 ~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~ 98 (256)
T 3tf7_C 19 ASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVHRSDSAVYFCAVSAK 98 (256)
T ss_dssp SCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCCGGGCSEEEEEEECT
T ss_pred CeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCCcccCEEEEEEEecC
Confidence 468899999889999999998531 11 1111 111223456666642 2346779999999999999999999764
Q ss_pred CC-----ceEeEEEEEEc--------------------CCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECC-
Q psy16425 76 PM-----KSQVGYLEVVV--------------------PPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREG- 129 (163)
Q Consensus 76 ~~-----~~~~~~l~v~~--------------------~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~- 129 (163)
.. ......|.|.. +|.+...+ ....+.+|+++.|.|.+.+. .|.+.|++..
T Consensus 99 ~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p--~~~~v~~G~~v~L~C~~~~~-~~~v~W~k~~~ 175 (256)
T 3tf7_C 99 GTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSP--RNKVTVTGENVTLSCRQTNS-HNYMYWYRQDT 175 (256)
T ss_dssp TCTTCEEECCCEEEEEEC---------------------CCEEESC--SEEEEETTCCEEECEEECSC-CSEEEEEEECT
T ss_pred CCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecC--CEEEEeCCCcEEEEEEcCCC-ceEEEEEEECC
Confidence 21 12234566654 33344333 35667799999999999876 7799999832
Q ss_pred -eE--EEe-------------cCCce-----EEeceEEEEcchhhhHh
Q psy16425 130 -GE--LIA-------------QGNGQ-----EDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 130 -~~--~~~-------------~~~~~-----~~~~~l~i~~v~~~~~~ 156 (163)
.. ... ..+.. .....|+|.+++.+|++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG 223 (256)
T 3tf7_C 176 GHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTS 223 (256)
T ss_dssp TSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCE
T ss_pred CCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCE
Confidence 11 111 01110 12347999999999875
No 135
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.66 E-value=4.5e-15 Score=101.01 Aligned_cols=129 Identities=18% Similarity=0.299 Sum_probs=83.8
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCC-ce---EEeee-ee---EEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDT-QT---ILTIQ-TH---VITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNT 74 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~-~~---~~~~~-~~---~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~ 74 (163)
.++.|.|...+ +.+.|.||+... .. +.... .. .....+|+.+.....++++|.|.+++.+|+|.|.|.+.+
T Consensus 18 ~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 96 (240)
T 3q5y_A 18 GRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSALELEDSAMYFCASSL 96 (240)
T ss_dssp CCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSCCGGGCEEEEEEEES
T ss_pred CcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcCChhHCEEEEEEEcc
Confidence 46788887764 788999999431 11 11111 11 112246888777666788999999999999999999962
Q ss_pred --C--CCceEeEEEEEEc------CCcccccCCCCcEEEeCCCcEEEEeEecc-CCCC-eEEEEECCeEEE
Q psy16425 75 --D--PMKSQVGYLEVVV------PPDILDYPTSTDMVIREGSNVTLKCAASG-SPKP-NITWRREGGELI 133 (163)
Q Consensus 75 --~--~~~~~~~~l~v~~------~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p-~v~W~~~~~~~~ 133 (163)
. ........+.|.. +|.+..... ....+.+|+.+.|.|.+.+ .|.| .+.|+++|..+.
T Consensus 97 ~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~-~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~l~ 166 (240)
T 3q5y_A 97 RWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEP-SKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEVH 166 (240)
T ss_dssp STTBCCEECCCEEEEEESCGGGCBCCEEEEECC-CHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEEC
T ss_pred CCCcceEEcCCEEEEEeccccCCCCCeeEEeCC-chhhcccCCceEEEEEEeeEECCCeEEEEEECCEECc
Confidence 1 1223344566663 333322111 1223446899999999988 6666 799999998874
No 136
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.66 E-value=9.2e-15 Score=100.45 Aligned_cols=152 Identities=16% Similarity=0.215 Sum_probs=97.5
Q ss_pred ceeEEEeeeec--cCCCEEEEEEcC-CceE---Eeee------eeEEecCCeEEEEeCC-CceEEEEEcccCCCCCeEEE
Q psy16425 3 ARMLIEIGEML--MAESTVAWLRVD-TQTI---LTIQ------THVITKNHRIGVTHSE-TKAWYLHIREVRESDRGWYM 69 (163)
Q Consensus 3 ~~~~~~~~~~~--~~~~~i~W~k~~-~~~~---~~~~------~~~~~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~ 69 (163)
..+.|.|...+ .+.+.|.||+.. +... .... .......+|+.+..+. .+.++|.|.+++.+|+|.|.
T Consensus 22 ~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~ 101 (256)
T 3juy_B 22 ASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSLRSADTAVYY 101 (256)
T ss_dssp CCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSCCGGGCEEEE
T ss_pred CeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCEEEEEECCCCcccCEEEE
Confidence 46888888776 478899999853 2111 1111 1111234678777543 45678999999999999999
Q ss_pred EEEEeC-------------CCceEeEEEEEEcCC---------------cccccCCCCcEEEeCCCcEEEEeEeccCCC-
Q psy16425 70 CQVNTD-------------PMKSQVGYLEVVVPP---------------DILDYPTSTDMVIREGSNVTLKCAASGSPK- 120 (163)
Q Consensus 70 C~~~~~-------------~~~~~~~~l~v~~~p---------------~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~- 120 (163)
|.+.+. ........|.|...+ .+...+ ....+.+|+++.|.|.+.+.|.
T Consensus 102 C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~G~~v~L~C~~~~~~~~ 179 (256)
T 3juy_B 102 CARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAP--GTLSLSPGERATFSCRSSHSIRS 179 (256)
T ss_dssp EEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEEC--SEEEECTTSCEEEEEEESSCCTT
T ss_pred EeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecC--CeEEEeCCCCEEEEEEECCCcCC
Confidence 999664 112234456666532 233322 3677889999999999998876
Q ss_pred CeEEEEEC--CeEEEe------------cCCceE----EeceEEEEcchhhhHh
Q psy16425 121 PNITWRRE--GGELIA------------QGNGQE----DFPFFKRTKKKKKKKK 156 (163)
Q Consensus 121 p~v~W~~~--~~~~~~------------~~~~~~----~~~~l~i~~v~~~~~~ 156 (163)
+.+.|++. +..+.. ..+... ....|+|.+++.+|.+
T Consensus 180 ~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG 233 (256)
T 3juy_B 180 RRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFA 233 (256)
T ss_dssp CCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCS
T ss_pred eeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCE
Confidence 89999983 222110 111111 1235999999999875
No 137
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.66 E-value=2.3e-16 Score=112.13 Aligned_cols=137 Identities=18% Similarity=0.223 Sum_probs=92.5
Q ss_pred eeEEEeeeecc---------CCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCe-EEEEEEE
Q psy16425 4 RMLIEIGEMLM---------AESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRG-WYMCQVN 73 (163)
Q Consensus 4 ~~~~~~~~~~~---------~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G-~Y~C~~~ 73 (163)
.+.|.|...+. |.+.|.|++. +..+.. ..+. ...+ +|.|.+++.+|+| .|+|.+.
T Consensus 46 ~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~-~~~~~~--------~~~~--~~~~----~L~i~~v~~~D~Gs~Y~C~a~ 110 (329)
T 3oq3_B 46 PFSAKCPPIEDSLLSHRYNDKDNVVNWEKI-GKTRRP--------LNRR--VKNG----DLWIANYTSNDSHRRYLCTVT 110 (329)
T ss_dssp CEEECCHHHHCTTTGGGSCCTTCEEEEEEC-SSSCEE--------CSTT--EETT----EEEESSCCGGGGGCCEEEEEE
T ss_pred eEEEEccCCCCccccccccCCCCeeEEEEC-CCCccc--------cCce--eecc----eEEEcCCChHhCCCcEEEEEE
Confidence 57788887663 6689999994 443321 1222 2222 8999999999999 9999997
Q ss_pred eCC-CceEeEEEEEE-cCCcccccCCCCcEEEeCCCcEEEEeEeccCC-CCeEEEEECCeEEEecC-CceEEeceEEEEc
Q psy16425 74 TDP-MKSQVGYLEVV-VPPDILDYPTSTDMVIREGSNVTLKCAASGSP-KPNITWRREGGELIAQG-NGQEDFPFFKRTK 149 (163)
Q Consensus 74 ~~~-~~~~~~~l~v~-~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p-~p~v~W~~~~~~~~~~~-~~~~~~~~l~i~~ 149 (163)
+.. .......+.+. .+|.+.... ....+.+|+.+.|.|.+.+.| .|.+.|++++..+.... .....++.|.|.+
T Consensus 111 n~~g~~~~~~~~~v~~~~p~~~~~~--~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~~~~~L~I~~ 188 (329)
T 3oq3_B 111 TKNGDCVQGIVRSHIRKPPSCIPET--YELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQSGQNLIIHN 188 (329)
T ss_dssp CTTSCEEEEEEEEEECCCCSCEEEE--EETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEEETTEEEECS
T ss_pred eCCCceeeEEEEEEEcCCCcEeccc--cceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEecCCCEEEEee
Confidence 764 32222222333 344322211 122356799999999999999 89999999999874332 2223568999999
Q ss_pred chhhhHhh
Q psy16425 150 KKKKKKKK 157 (163)
Q Consensus 150 v~~~~~~~ 157 (163)
++.+|++.
T Consensus 189 v~~~D~G~ 196 (329)
T 3oq3_B 189 PELEDSGR 196 (329)
T ss_dssp CCGGGCEE
T ss_pred cChhhCEE
Confidence 99998763
No 138
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.66 E-value=6.2e-15 Score=99.55 Aligned_cols=150 Identities=15% Similarity=0.218 Sum_probs=94.1
Q ss_pred ceeEEEeeeeccC--CCEEEEEEcC-CceEEe---ee----eeEE--ecCCeEEEEeCC-CceEEEEEcccCCCCCeEEE
Q psy16425 3 ARMLIEIGEMLMA--ESTVAWLRVD-TQTILT---IQ----THVI--TKNHRIGVTHSE-TKAWYLHIREVRESDRGWYM 69 (163)
Q Consensus 3 ~~~~~~~~~~~~~--~~~i~W~k~~-~~~~~~---~~----~~~~--~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~ 69 (163)
.++.|.|...+.+ .+.|.||+.+ +..... .. .... ...+|+.+..+. .++++|.|.+++.+|+|.|.
T Consensus 16 ~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D~G~Y~ 95 (225)
T 1op3_H 16 GSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKMRVEDTAIYY 95 (225)
T ss_dssp CCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSCCGGGCEEEE
T ss_pred CCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCCChhhCEEEE
Confidence 4688999887665 7899999864 222211 10 0011 134678776543 45679999999999999999
Q ss_pred EEEEeCCC---------ceEeEEEEEEc----CCcccccCCCCcEEEeCCCcEEEEeEeccC-CCC-eEEEEECCeEEE-
Q psy16425 70 CQVNTDPM---------KSQVGYLEVVV----PPDILDYPTSTDMVIREGSNVTLKCAASGS-PKP-NITWRREGGELI- 133 (163)
Q Consensus 70 C~~~~~~~---------~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p-~v~W~~~~~~~~- 133 (163)
|.+.+... ....+.|.|.. +|.+...++.. .+.+|+.+.|.|.+.+. |.| .+.|++++..+.
T Consensus 96 C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~--~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~ 173 (225)
T 1op3_H 96 CARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSS--KSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGV 173 (225)
T ss_dssp EEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCT--TCCCCCEEEEEEEEEEEBSSCCEEECCTTSCCTTC
T ss_pred EEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccc--cccCCCcEEEEEEEEeEECCCeEEEEecCCCcCCe
Confidence 99976531 11345677765 23333222111 24579999999999875 777 999999886521
Q ss_pred -ecC------CceEEeceEEEEcchhhh
Q psy16425 134 -AQG------NGQEDFPFFKRTKKKKKK 154 (163)
Q Consensus 134 -~~~------~~~~~~~~l~i~~v~~~~ 154 (163)
... ........|.|..+..+|
T Consensus 174 ~~~~~~~~~~g~~~~~s~L~i~~~~~~~ 201 (225)
T 1op3_H 174 HTFPAVLQSSGLYSLSSVVTVPSSSLGT 201 (225)
T ss_dssp EECCCEECTTSCEEEEEEEEEEGGGTTC
T ss_pred EecCceeCCCCCEEEEEEEEEechhcCC
Confidence 110 111123457888777655
No 139
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.66 E-value=8.5e-16 Score=105.01 Aligned_cols=152 Identities=15% Similarity=0.225 Sum_probs=94.5
Q ss_pred ceeEEEeeeeccC-----CCEEEEEEcCC-ceEE--ee--eeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEE
Q psy16425 3 ARMLIEIGEMLMA-----ESTVAWLRVDT-QTIL--TI--QTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQV 72 (163)
Q Consensus 3 ~~~~~~~~~~~~~-----~~~i~W~k~~~-~~~~--~~--~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~ 72 (163)
..+.|.|...+.+ .+.|.||+.+. .... .. ........+|+.... ..+.++|.|.+++.+|+|.|.|.+
T Consensus 17 ~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~~ 95 (247)
T 1svz_A 17 DQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSG-SGTDFTLKISRVEAEDLGIYYCFQ 95 (247)
T ss_dssp CCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEE-ETTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEecc-CCCEEEEEECCCCHHHCEEEEEEE
Confidence 4688999988777 68999999542 2111 10 000001245776654 235678999999999999999999
Q ss_pred EeCCC--ceEeEEEEEEcCC------------cccccCCCCcEEEeCCCcEEEEeEeccCC--CCeEEEEECC--eEE--
Q psy16425 73 NTDPM--KSQVGYLEVVVPP------------DILDYPTSTDMVIREGSNVTLKCAASGSP--KPNITWRREG--GEL-- 132 (163)
Q Consensus 73 ~~~~~--~~~~~~l~v~~~p------------~~~~~~~~~~~~~~~g~~~~l~C~~~~~p--~p~v~W~~~~--~~~-- 132 (163)
.+... ....+.|.|..++ .+..... ....+.+|+++.|.|.+.+.| .+.+.|++++ ..+
T Consensus 96 ~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~ 174 (247)
T 1svz_A 96 GSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQS-GPELKKPGETVKISCKATNYAFTDYSMHWVKQAPGGDLKY 174 (247)
T ss_dssp CSSSSCEECCCEEEEEC---------------CCEEEEC-CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEE
T ss_pred ccCCccEECCCEEEEEECCccccccccccccCceEEeCC-CceeecCCCcEEEEEEEcCcccCCcEEEEEEeCCCCCcEE
Confidence 66532 2233567776542 1111111 234588999999999999875 5689999863 211
Q ss_pred Ee---------------cCCceEE------eceEEEEcchhhhHh
Q psy16425 133 IA---------------QGNGQED------FPFFKRTKKKKKKKK 156 (163)
Q Consensus 133 ~~---------------~~~~~~~------~~~l~i~~v~~~~~~ 156 (163)
.. ..+.... ...|+|.+++.+|++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG 219 (247)
T 1svz_A 175 VGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTA 219 (247)
T ss_dssp EEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCE
T ss_pred EEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCE
Confidence 10 1111111 247999999999875
No 140
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.66 E-value=1.9e-15 Score=103.13 Aligned_cols=151 Identities=12% Similarity=0.139 Sum_probs=95.0
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCC-ceE---Eee-eeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCC
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDT-QTI---LTI-QTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPM 77 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~-~~~---~~~-~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~ 77 (163)
.++.|.|...+.|.+.|.||+.+. ... ... ........+|+.+... .+.++|.|.+++.+|+|.|.|.+.+...
T Consensus 17 ~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~~~n~~~ 95 (242)
T 2znx_A 17 NSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGS-GTDFTLSINSVETEDFGMYFCQQSNSXP 95 (242)
T ss_dssp CCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEE-TTEEEEEESSCCGGGCEEEEEEECSSSS
T ss_pred CcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecC-CCEEEEEECCCChHHCEEEEEeEecCCc
Confidence 468899999888899999999532 111 110 0000012457766542 3466899999999999999999966532
Q ss_pred --ceEeEEEEEEcCCc-------------ccccCCCCcEEEeCCCcEEEEeEeccCC--CCeEEEEECC--eEEE---e-
Q psy16425 78 --KSQVGYLEVVVPPD-------------ILDYPTSTDMVIREGSNVTLKCAASGSP--KPNITWRREG--GELI---A- 134 (163)
Q Consensus 78 --~~~~~~l~v~~~p~-------------~~~~~~~~~~~~~~g~~~~l~C~~~~~p--~p~v~W~~~~--~~~~---~- 134 (163)
......|.|..+|. ....+ ....+.+|+++.|.|.+.+.| .+.+.|+++. ..+. .
T Consensus 96 ~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~~~~~~~l~~~ 173 (242)
T 2znx_A 96 YTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQES--GPSLVKPSQTLSLTCSVTGDSITSDYXSXIRKFPGNRLEYMGYV 173 (242)
T ss_dssp CEECCCEEEEEC---------------CCEEEEE--CCSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEE
T ss_pred eEECCCEEEEEcCCCCCCcccccccccceeeecC--CcceecCCCeEEEEEEEEccccCCcceeeEeeCCCCCcEEEEEE
Confidence 12345677765442 11111 134588999999999999876 4789999852 2221 0
Q ss_pred ------------cCCceEE------eceEEEEcchhhhHh
Q psy16425 135 ------------QGNGQED------FPFFKRTKKKKKKKK 156 (163)
Q Consensus 135 ------------~~~~~~~------~~~l~i~~v~~~~~~ 156 (163)
..+.... ...|+|.+++.+|++
T Consensus 174 ~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G 213 (242)
T 2znx_A 174 SYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTA 213 (242)
T ss_dssp CTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCE
T ss_pred ecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCE
Confidence 1111111 237999999999976
No 141
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.66 E-value=2.9e-15 Score=101.11 Aligned_cols=128 Identities=15% Similarity=0.286 Sum_probs=83.5
Q ss_pred ceeEEEeeeeccC--CCEEEEEEcC-CceEE---eee----eeEE--ecCCeEEEEeCC-CceEEEEEcccCCCCCeEEE
Q psy16425 3 ARMLIEIGEMLMA--ESTVAWLRVD-TQTIL---TIQ----THVI--TKNHRIGVTHSE-TKAWYLHIREVRESDRGWYM 69 (163)
Q Consensus 3 ~~~~~~~~~~~~~--~~~i~W~k~~-~~~~~---~~~----~~~~--~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~ 69 (163)
.++.|.|...+.+ .+.|.||+.+ +.... ... .... ...+|+.+..+. .++++|.|.+++.+|+|.|.
T Consensus 16 ~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D~G~Y~ 95 (223)
T 1dee_B 16 KSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYY 95 (223)
T ss_dssp CCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSCCGGGCEEEE
T ss_pred CcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCCCHHHCEEEE
Confidence 4688999887654 5789999964 22211 110 0001 124688877543 35789999999999999999
Q ss_pred EEEEeCCC-------ceEeEEEEEEc----CCcccccCCCCcEEEeCCCcEEEEeEeccC-CCC-eEEEEE-CCeEE
Q psy16425 70 CQVNTDPM-------KSQVGYLEVVV----PPDILDYPTSTDMVIREGSNVTLKCAASGS-PKP-NITWRR-EGGEL 132 (163)
Q Consensus 70 C~~~~~~~-------~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p-~v~W~~-~~~~~ 132 (163)
|.+.+... ....+.|.|.. +|.+...+. ...+.+|+.+.|.|.+.+. |.| .+.|++ ++..+
T Consensus 96 C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~--~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~g~~l 170 (223)
T 1dee_B 96 CAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLVS--CENSNPSSTVAVGCLAQDFLPDSITFSWKYKNNSDI 170 (223)
T ss_dssp EEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEEC--TTCCCSSSEEEEEEEEEEEBSSCCEEEEEETTSCBC
T ss_pred EEEeccccCcccceeecCcEEEEEccCCCCCCEEEEecC--CcccCCCCcEEEEEEEEEEeCCCeEEEeEccCCCcc
Confidence 99966431 11334677763 333332111 1124679999999999876 777 999999 87765
No 142
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.66 E-value=2.3e-15 Score=118.37 Aligned_cols=142 Identities=20% Similarity=0.317 Sum_probs=104.0
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEE----EeCCCceEEEEEcccCCCCCeEEEEEEEeC-CC
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGV----THSETKAWYLHIREVRESDRGWYMCQVNTD-PM 77 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~----~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~ 77 (163)
..+.|.|...+.|.+.|.|++ ++..+. ...++.. ...+.....|.|.+++.+|+|.|+|.+.+. +.
T Consensus 445 ~~v~L~C~~~g~p~p~v~W~~-~g~~l~--------~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 515 (816)
T 3dmk_A 445 PSVFLKCVAGGNPTPEISWEL-DGKKIA--------NNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGV 515 (816)
T ss_dssp SCEEEEEEEECSSCCEEEEEE-TTEECC--------SCTTEEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEEEETTEE
T ss_pred CCEEEEEEEecCCCCEEEEEE-CCEECC--------CCCCcccccEEecCCCcEEEEEEeeccccCCEEEEEEEEECCCe
Confidence 357889999999999999999 555442 1222222 112223347999999999999999999776 44
Q ss_pred ceEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceE-EeceEEEEcchh-hhH
Q psy16425 78 KSQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQE-DFPFFKRTKKKK-KKK 155 (163)
Q Consensus 78 ~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~-~~~~l~i~~v~~-~~~ 155 (163)
....+.|.|..+|.+... ....+.+|+.+.|.|.+.+.|.+.+.|++++..+........ .++.|.|.++.+ +|.
T Consensus 516 ~~~~~~l~V~~~p~~~~~---~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~~~~l~~~~~~~~~~~~~l~i~~v~~~~d~ 592 (816)
T 3dmk_A 516 AEHSAKLNVYGLPYIRQM---EKKAIVAGETLIVTCPVAGYPIDSIVWERDNRALPINRKQKVFPNGTLIIENVERNSDQ 592 (816)
T ss_dssp EEEEEEEEECSSCEECCC---CCEEEETTCCEEEECCEECSSEEEEEEEETTEESCCSTTEEECTTSEEEESSCCHHHHC
T ss_pred EEEEEEEEEecCCeeEcc---CCeEEecCCeEEEEEEecCCCCCEEEEEECCeEcccCCceEEecCCeEEEEecCccccC
Confidence 556677888877755432 346788999999999999999999999999988755444332 457899999974 565
Q ss_pred h
Q psy16425 156 K 156 (163)
Q Consensus 156 ~ 156 (163)
+
T Consensus 593 G 593 (816)
T 3dmk_A 593 A 593 (816)
T ss_dssp E
T ss_pred E
Confidence 4
No 143
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.66 E-value=2.4e-15 Score=103.53 Aligned_cols=152 Identities=15% Similarity=0.153 Sum_probs=89.4
Q ss_pred ceeEEEeeeeccCCCEEEEEEcC--Cce--EEeee---e-eEEe--cC-CeEEEEeCCCceEEEEEcccCCCCCeEEEEE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVD--TQT--ILTIQ---T-HVIT--KN-HRIGVTHSETKAWYLHIREVRESDRGWYMCQ 71 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~--~~~--~~~~~---~-~~~~--~~-~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 71 (163)
..+.|.|...+.+.+.|.||+.. ... +.... . .... .. .+..........++|.|.+++.+|+|.|.|.
T Consensus 18 ~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 97 (259)
T 3omz_A 18 SSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRMILRNLIENDSGVYYCA 97 (259)
T ss_dssp CCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEEEESSCCGGGCEEEEEE
T ss_pred CcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEEEECCCCcccCEEEEEE
Confidence 46889999998899999999942 111 11111 0 0000 11 2222222334566899999999999999999
Q ss_pred EEeCCC----ceEeEEEEEEcC-----------------CcccccCCCCcEEEeCCCcEEEEeEeccC-CCCeEEEEECC
Q psy16425 72 VNTDPM----KSQVGYLEVVVP-----------------PDILDYPTSTDMVIREGSNVTLKCAASGS-PKPNITWRREG 129 (163)
Q Consensus 72 ~~~~~~----~~~~~~l~v~~~-----------------p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p~v~W~~~~ 129 (163)
+.+... ......|.|... |.+...+ ....+.+|+++.|.|.+.+. |.+.+.|+++.
T Consensus 98 ~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p--~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~ 175 (259)
T 3omz_A 98 TWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQ--SSVSMPVRKAVTLNCLYETSWWSYYIFWYKRL 175 (259)
T ss_dssp EECTTSSCEEECCCEEEEEEC------------------CEEECCC--CCEEEETTCCEEECCEEECCCSSCEEEEEEEC
T ss_pred EeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeC--CEEEEcCCCCEEEEEECCCccCCceEEEeeeC
Confidence 976532 223455666653 2233322 35778899999999998874 78899999853
Q ss_pred e--EE--E-e---------cCCceE------EeceEEEEcchhhhHh
Q psy16425 130 G--EL--I-A---------QGNGQE------DFPFFKRTKKKKKKKK 156 (163)
Q Consensus 130 ~--~~--~-~---------~~~~~~------~~~~l~i~~v~~~~~~ 156 (163)
. .+ . . ..+... ....|+|.+++.+|.+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG 222 (259)
T 3omz_A 176 PSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDSA 222 (259)
T ss_dssp TTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGCS
T ss_pred CCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHCE
Confidence 1 11 1 0 111111 1245999999999875
No 144
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.66 E-value=3.4e-16 Score=112.57 Aligned_cols=129 Identities=9% Similarity=0.049 Sum_probs=92.8
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCC-ceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPM-KSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~-~~~~ 81 (163)
..+.|.|...+.|.+.|.|++.++ .+. ... ..|.|.+++.+|+|.|+|.+.+... ....
T Consensus 112 ~~v~l~C~~~~~p~~~v~W~~~~~-~~~---------------~~~----~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~ 171 (363)
T 1wio_A 112 QSLTLTLESPPGSSPSVQCRSPRG-KNI---------------QGG----KTLSVSQLELQDSGTWTCTVLQNQKKVEFK 171 (363)
T ss_dssp SCEEEEEECCTTCCCCEEEECSSS-CEE---------------EES----SEEEECSBCGGGCEECEEEEEETTEEEEEC
T ss_pred CCEEEEEEcCCCCCCeEEEEcCCC-ccc---------------ccc----eEEEEeeCChhcCCEEEEEEecCCCeEEEE
Confidence 468889998889999999999433 221 111 2899999999999999999976532 2233
Q ss_pred EEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEecc-----CCCCeEEEEECCeEEEe--------cCCceE--------
Q psy16425 82 GYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASG-----SPKPNITWRREGGELIA--------QGNGQE-------- 140 (163)
Q Consensus 82 ~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-----~p~p~v~W~~~~~~~~~--------~~~~~~-------- 140 (163)
+.+.+...|... ....+.+|+.+.|.|.+.+ +|.|.+.|++++..+.. ......
T Consensus 172 ~~l~v~~~p~~~-----~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (363)
T 1wio_A 172 IDIVVLAFQKAS-----SIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPK 246 (363)
T ss_dssp CEECEECCSCSE-----EEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSC
T ss_pred EEEEEecCCCCC-----CceEEecCCEEEEEEEEecccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchh
Confidence 455555555432 3556888999999998877 78899999999877544 222111
Q ss_pred ----E--eceEEEEcchhhhHh
Q psy16425 141 ----D--FPFFKRTKKKKKKKK 156 (163)
Q Consensus 141 ----~--~~~l~i~~v~~~~~~ 156 (163)
. ...|.|.+++.+|++
T Consensus 247 ~~~~~~~~~~L~i~~v~~~d~G 268 (363)
T 1wio_A 247 LQMGKKLPLHLTLPQALPQYAG 268 (363)
T ss_dssp CBCCSSSSCEEEESSBCGGGCE
T ss_pred hhcccCCceEEEEccCCcCcCc
Confidence 1 348999999999876
No 145
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.66 E-value=2.6e-15 Score=98.36 Aligned_cols=120 Identities=21% Similarity=0.236 Sum_probs=78.5
Q ss_pred ceeEEEeeeec-cCCCEEEEEEcCCceEEeeee---e-EE--ecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC
Q psy16425 3 ARMLIEIGEML-MAESTVAWLRVDTQTILTIQT---H-VI--TKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD 75 (163)
Q Consensus 3 ~~~~~~~~~~~-~~~~~i~W~k~~~~~~~~~~~---~-~~--~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 75 (163)
.++.|.|.... .+.+.|.|++.++..+..... . .+ ...+|+.+. ..+++|.|.+++.+|+|.|.|.+.+.
T Consensus 15 ~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~---~~~~sL~I~~v~~~D~G~Y~C~v~~~ 91 (180)
T 2dru_A 15 SNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLD---KTNGALRIYNVSKEDRGDYYMRMLHE 91 (180)
T ss_dssp SCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEEC---TTTCCEEECSCCGGGCEEEEEEEESS
T ss_pred CCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEe---CCCccEEEcCCCHHHCeEEEEEEEcC
Confidence 46888887643 457899999943333322111 1 11 122677762 12348999999999999999999654
Q ss_pred CCceEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEe-ccCCCCeEEEEECCeEEE
Q psy16425 76 PMKSQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAA-SGSPKPNITWRREGGELI 133 (163)
Q Consensus 76 ~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~p~v~W~~~~~~~~ 133 (163)
......+.|.|..++..+ ... ..+.++.|.|.+ .+ |.|.+.|++++..+.
T Consensus 92 ~~~~~~~~L~V~~~~~~P------~i~-~~~~~v~L~C~~~~g-p~p~i~W~~~~~~l~ 142 (180)
T 2dru_A 92 TEDQWKITMEVYEMVSKP------MIY-WECSNATLTCEVLEG-TDVELKLYQGKEHLR 142 (180)
T ss_dssp SEEEEEEEEEEECCCCCC------EEE-EEGGGTEEEEECSSC-TTCEEEEEETTEEEE
T ss_pred CeEEEEEEEEEECCCCCC------EEE-ecCCCEEEEEEeCCC-CCCEEEEEECCeECc
Confidence 433444566666543211 122 245679999999 56 999999999998874
No 146
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.66 E-value=1.5e-15 Score=104.28 Aligned_cols=125 Identities=20% Similarity=0.249 Sum_probs=79.4
Q ss_pred ceeEEEeeeecc--CCCEEEEEEcCC-ceE---Eee-eeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC
Q psy16425 3 ARMLIEIGEMLM--AESTVAWLRVDT-QTI---LTI-QTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD 75 (163)
Q Consensus 3 ~~~~~~~~~~~~--~~~~i~W~k~~~-~~~---~~~-~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 75 (163)
..+.|.|...+. +.+.|.||+.+. ... ... ........+|+.....+ ..++|.|.+++.+|+|.|.|.+.+.
T Consensus 18 ~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~L~I~~v~~~DsG~Y~C~~~~~ 96 (256)
T 3ux9_B 18 QRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSG-TSASLAITGLQSEDEADYYCQVRDN 96 (256)
T ss_dssp CCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEET-TEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccC-CEEEEEECCCChhhCEEEEEEEEEC
Confidence 468889988776 788999999531 111 100 01111123566665432 5678999999999999999999764
Q ss_pred CC----ceEeEEEEEEcCCccc------------------ccCCCCcEEEeCCCcEEEEeEeccCC--CCeEEEEEC
Q psy16425 76 PM----KSQVGYLEVVVPPDIL------------------DYPTSTDMVIREGSNVTLKCAASGSP--KPNITWRRE 128 (163)
Q Consensus 76 ~~----~~~~~~l~v~~~p~~~------------------~~~~~~~~~~~~g~~~~l~C~~~~~p--~p~v~W~~~ 128 (163)
.. ......|.|...+... .........+.+|+++.|.|.+.+.| .+.+.|+++
T Consensus 97 ~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 173 (256)
T 3ux9_B 97 NENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQ 173 (256)
T ss_dssp TTTEEEECCCEEEEEC----------------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEEEEEE
T ss_pred CCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcCCCeEEcCCCeEEEEEEEeCCcccccEEEEEEE
Confidence 21 2233466666543110 00011245588999999999999876 788999986
No 147
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.66 E-value=1.8e-15 Score=103.54 Aligned_cols=138 Identities=13% Similarity=0.074 Sum_probs=92.3
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCC---Cce
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDP---MKS 79 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~---~~~ 79 (163)
..+.|.|...+ +...+.||| ++..+... .... ........|.|.+++.+|+|.|+|.+.+.. ..+
T Consensus 22 ~~VtL~C~~~~-~~~~~~w~k-~g~~~~~~------~~~~----~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~s~~S 89 (242)
T 1p6f_A 22 KQVTICCQGNY-GAVEYQLHF-EGSLFAVD------RPKP----PERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPS 89 (242)
T ss_dssp CCEEEEEECCT-TCCEEEEEE-TTEEEEEE------CCSS----CTTCCEEEEEECSCCGGGCEEEEEEEEETTEECCCC
T ss_pred CcEEEEEeeCC-CCcEEEEEE-CCCccccc------cccc----cCCcceeEEEecCCCcccCeEEEEEEecCCccccCC
Confidence 46888888764 457899999 55443211 0000 011234589999999999999999996542 234
Q ss_pred EeEEEEEEc---CCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceEEeceEEEEcchhhhHh
Q psy16425 80 QVGYLEVVV---PPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQEDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 80 ~~~~l~v~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~l~i~~v~~~~~~ 156 (163)
..+.|.|.. .|.+...+ ...+.+|++++|.|.+.+. .+.+.|++++..+............|.|.+|+.+|++
T Consensus 90 ~~~~L~V~~~~~~P~i~~~p---~~~v~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~l~I~~v~~~d~G 165 (242)
T 1p6f_A 90 NLLDLVVTEMYDTPTLSVHP---GPEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHVQRGYGKVQAEFPLGPVTTAHRG 165 (242)
T ss_dssp CCEEEEEECCSCCCEEEEES---CSEEETTCEEEEEEECTTS-CSEEEEEECSSSCEEEEEECSSEEEEEEEECCGGGCE
T ss_pred cceEEEeecccCCCceEccC---CCccCCCCcEEEEEecCCC-CCEEEEEECCCccCccccCCCceEEEEeCCCccccCE
Confidence 456676664 34444333 3457899999999998764 4699999998765432111124567999999999876
No 148
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.65 E-value=1.1e-15 Score=106.49 Aligned_cols=130 Identities=20% Similarity=0.364 Sum_probs=85.3
Q ss_pred ceeEEEeeeeccCCCEEEEEEcC-Cce---EEeeee---e-E--EecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVD-TQT---ILTIQT---H-V--ITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQV 72 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~-~~~---~~~~~~---~-~--~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~ 72 (163)
.++.|.|...+.+.+.|.||+.+ +.. +..... . . ....+|+.+.....++++|.|.+++.+|+|.|.|.+
T Consensus 40 ~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~ 119 (279)
T 2wbj_D 40 TSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSFYICSA 119 (279)
T ss_dssp SCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEEESSCCGGGCEEEEEEE
T ss_pred CeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEEEccCCccCCEEEEEEE
Confidence 46888998888888999999964 111 111110 0 0 012468887765556789999999999999999999
Q ss_pred EeCC-------CceEeEEEEEEc------CCcccccCCCCcEEEeCCCcEEEEeEeccC-CC-CeEEEEECCeEEE
Q psy16425 73 NTDP-------MKSQVGYLEVVV------PPDILDYPTSTDMVIREGSNVTLKCAASGS-PK-PNITWRREGGELI 133 (163)
Q Consensus 73 ~~~~-------~~~~~~~l~v~~------~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-p~v~W~~~~~~~~ 133 (163)
.+.. .......|.|.. +|.+..... ....+.+|+.+.|.|.+.+. |+ +.+.|++++..+.
T Consensus 120 ~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~-~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~ 194 (279)
T 2wbj_D 120 RDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEP-SEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVH 194 (279)
T ss_dssp EETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEEC-CHHHHHHHSCCEEEEEEEEEBSSCEEEEEEETTEECC
T ss_pred cccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECC-CcccccCCCceEEEEEEeeEcCCCcEEEEEECCEECC
Confidence 7621 112334677765 233322111 11123368999999999986 54 6899999998764
No 149
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.65 E-value=4.3e-15 Score=100.08 Aligned_cols=127 Identities=17% Similarity=0.282 Sum_probs=84.2
Q ss_pred ceeEEEeeeeccC--CCEEEEEEcC-CceE---Eeee---e-eEE--ecCCeEEEEeCC-CceEEEEEcccCCCCCeEEE
Q psy16425 3 ARMLIEIGEMLMA--ESTVAWLRVD-TQTI---LTIQ---T-HVI--TKNHRIGVTHSE-TKAWYLHIREVRESDRGWYM 69 (163)
Q Consensus 3 ~~~~~~~~~~~~~--~~~i~W~k~~-~~~~---~~~~---~-~~~--~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~ 69 (163)
.++.|.|...+.+ .+.|.||+.+ +... .... . ... ...+|+.+..+. .++++|.|.+++.+|+|.|.
T Consensus 16 ~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~ 95 (220)
T 2fbj_H 16 GSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKVRSEDTALYY 95 (220)
T ss_dssp CCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSCCGGGCEEEE
T ss_pred CcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCCChhhCEEEE
Confidence 4688899887654 6889999964 2211 1110 0 001 134688877653 45789999999999999999
Q ss_pred EEEEeCCC----ceEeEEEEEEcC----CcccccCCCCcEEEeCCCcEEEEeEeccC-CC--CeEEEEECCeEE
Q psy16425 70 CQVNTDPM----KSQVGYLEVVVP----PDILDYPTSTDMVIREGSNVTLKCAASGS-PK--PNITWRREGGEL 132 (163)
Q Consensus 70 C~~~~~~~----~~~~~~l~v~~~----p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~--p~v~W~~~~~~~ 132 (163)
|.+.+... ....+.|.|... |.+...+ ...+.+|+.+.|.|.+.+. |. +.+.|++++..+
T Consensus 96 C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~---~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~~~ 166 (220)
T 2fbj_H 96 CARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLT---LPPALSSDPVIIGCLIHDYFPSGTMNVTWGKSGKDI 166 (220)
T ss_dssp EEEEETTTEEEEECCCEEEEECSSCCBCCEEEEEC---CCSSSCCSSEEEEEEEEEEBSCCCEEEEESCCCSSC
T ss_pred EEEeccccccceecCCEEEEecCCCCCCCEEEEee---cccccCCCcEEEEEEEEeEECCCcEEEEEecCCEec
Confidence 99976532 123356777642 3333222 1124679999999999875 76 689999998764
No 150
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.65 E-value=6.3e-17 Score=113.94 Aligned_cols=139 Identities=14% Similarity=0.262 Sum_probs=87.8
Q ss_pred ceeEEEeeeecc-CCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCceEe
Q psy16425 3 ARMLIEIGEMLM-AESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~-~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~ 81 (163)
..+.|.|...+. |.+.|.|++ ++..+. ...++... .+..+|.|.+++.+|+|.|+|.+.+... ...
T Consensus 22 ~~v~l~C~~~~~~p~~~v~W~~-~~~~~~--------~~~~~~~~---~~~~~L~i~~~~~~d~G~Y~C~~~n~~g-~~~ 88 (317)
T 2y25_A 22 CNVLLKCKVANIKKETHIVWYK-DEREIS--------VDEKHDFK---DGICTLLITEFSKKDAGIYEVILKDDRG-KDK 88 (317)
T ss_dssp TEEEEEEEEESCCTTCEEEEEE-TTEEEC--------CSCC--------CCEEEEETTCCSTTCSCEEEEEESSSC-EEE
T ss_pred CeEEEEEEEcCCCCCCEEEEEE-CCeEcC--------CCCcEEEE---CCeEEEEEccCCcccCeEEEEEEECCCC-cEE
Confidence 468888987777 789999999 555442 12233222 2345899999999999999999966532 222
Q ss_pred EEEEEEc--CCcccccCCCCcEEEeCCCcEEEEeEecc----------CCCCeEEEEECCeEEEecCCceE----EeceE
Q psy16425 82 GYLEVVV--PPDILDYPTSTDMVIREGSNVTLKCAASG----------SPKPNITWRREGGELIAQGNGQE----DFPFF 145 (163)
Q Consensus 82 ~~l~v~~--~p~~~~~~~~~~~~~~~g~~~~l~C~~~~----------~p~p~v~W~~~~~~~~~~~~~~~----~~~~l 145 (163)
..+.+.+ .|.+...+ ....+.+|+.+.|.|.+.+ .|.|.+.|++++..+........ ....|
T Consensus 89 ~~~~l~v~~~~~~~~~~--~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L 166 (317)
T 2y25_A 89 SRLKLVDEAFKELMMEV--CKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWL 166 (317)
T ss_dssp EEECCSTHHHHHHHHHH--HHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCCSSEEEEECSSEEEE
T ss_pred EEEEEEEecCccccccC--CceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCCCCCeEEeccCCEEEE
Confidence 3333322 22221111 1222345666666666655 78999999999988765544332 12349
Q ss_pred EEEcchhhhHh
Q psy16425 146 KRTKKKKKKKK 156 (163)
Q Consensus 146 ~i~~v~~~~~~ 156 (163)
.|.+++.+|.+
T Consensus 167 ~i~~~~~~d~G 177 (317)
T 2y25_A 167 QINEPTPNDKG 177 (317)
T ss_dssp EEESCCGGGCE
T ss_pred EECcCCcccCe
Confidence 99999998875
No 151
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.65 E-value=8.1e-15 Score=99.20 Aligned_cols=150 Identities=16% Similarity=0.190 Sum_probs=90.7
Q ss_pred ceeEEEeeeeccC--CCEEEEEEcC-CceEE---eee----eeEE--ecCCeEEEEeCC-CceEEEEEcccCCCCCeEEE
Q psy16425 3 ARMLIEIGEMLMA--ESTVAWLRVD-TQTIL---TIQ----THVI--TKNHRIGVTHSE-TKAWYLHIREVRESDRGWYM 69 (163)
Q Consensus 3 ~~~~~~~~~~~~~--~~~i~W~k~~-~~~~~---~~~----~~~~--~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~ 69 (163)
.++.|.|...+.+ .+.|.||+.+ +.... ... .... ...+|+.+..+. .++++|.|.+++.+|+|.|.
T Consensus 16 ~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D~G~Y~ 95 (227)
T 1mju_H 16 ASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSSLTSDDSAVYY 95 (227)
T ss_dssp CCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEE
T ss_pred CCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECCCCcccCEEEE
Confidence 4688999887765 6899999964 22211 110 0111 125688776543 45789999999999999999
Q ss_pred EEEEeCCC--ceEeEEEEEEc----CCcccccCCCCcEEEeCCCcEEEEeEeccC-CCC-eEEEEECCeEEE--ecCC--
Q psy16425 70 CQVNTDPM--KSQVGYLEVVV----PPDILDYPTSTDMVIREGSNVTLKCAASGS-PKP-NITWRREGGELI--AQGN-- 137 (163)
Q Consensus 70 C~~~~~~~--~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p-~v~W~~~~~~~~--~~~~-- 137 (163)
|.+.+... ......|.|.. +|.+..... ...+.+|+.+.|.|.+.|. |.| .+.|++++..+. ....
T Consensus 96 C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~--~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~~ 173 (227)
T 1mju_H 96 CANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLAP--VCGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVL 173 (227)
T ss_dssp EEEEETTEEEECCCEEEEECSSCCBCCEEEEECC--CC------CEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEE
T ss_pred EEECCCCceEEcCcEEEEEcCCCCCCCEEEEecC--CccccCCCcEEEEEEeecEeCCCeEEEEecCCCcCCcEECCcee
Confidence 99976421 12334677764 233332221 1235679999999999975 777 999999987531 1111
Q ss_pred --ce-EEeceEEEEcchhhh
Q psy16425 138 --GQ-EDFPFFKRTKKKKKK 154 (163)
Q Consensus 138 --~~-~~~~~l~i~~v~~~~ 154 (163)
.. .....|+|..+..+|
T Consensus 174 ~~g~~~~~s~L~i~~~~~~~ 193 (227)
T 1mju_H 174 QSDLYTLSSSVTVTSSTWPS 193 (227)
T ss_dssp ETTEEEEEEEEEECTTTTTT
T ss_pred cCCeEEEEEEEEEchhhcCC
Confidence 11 233567887777654
No 152
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.65 E-value=1.6e-14 Score=99.28 Aligned_cols=152 Identities=16% Similarity=0.191 Sum_probs=96.2
Q ss_pred ceeEEEeeeec--cCCCEEEEEEcCC-ceEEee------e--eeEEecCCeEEEEeCC-CceEEEEEcccCCCCCeEEEE
Q psy16425 3 ARMLIEIGEML--MAESTVAWLRVDT-QTILTI------Q--THVITKNHRIGVTHSE-TKAWYLHIREVRESDRGWYMC 70 (163)
Q Consensus 3 ~~~~~~~~~~~--~~~~~i~W~k~~~-~~~~~~------~--~~~~~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C 70 (163)
..+.|.|...+ .+.+.|.||+... ...... + .......+|+.+..+. .+.++|.|.+++.+|+|.|.|
T Consensus 24 ~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C 103 (257)
T 3gkz_A 24 QTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLKSVSSEDTATYYC 103 (257)
T ss_dssp CCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEE
T ss_pred CcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEECCCChhhCEEEEE
Confidence 46888898877 4588999999532 111111 0 0001234677766543 356789999999999999999
Q ss_pred EEEeCC---C--ceEeEEEEEEcC--------------CcccccCCCCcEEEeCCCcEEEEeEeccCCCC-eEEEEEC--
Q psy16425 71 QVNTDP---M--KSQVGYLEVVVP--------------PDILDYPTSTDMVIREGSNVTLKCAASGSPKP-NITWRRE-- 128 (163)
Q Consensus 71 ~~~~~~---~--~~~~~~l~v~~~--------------p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p-~v~W~~~-- 128 (163)
.+.+.. . ......|.|..+ +.+... .....+.+|+++.|.|.+.+.|.+ .+.|+++
T Consensus 104 ~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~--p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~ 181 (257)
T 3gkz_A 104 SYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQS--PAIMSASPGEKVTLTCSASSSVSSSHLYWYQQKP 181 (257)
T ss_dssp EEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECS--CSEEEECTTCCEEEEEEESSCCCGGGEEEEEECT
T ss_pred EEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcC--CceEEEeCCCcEEEEEEEccCccceEEEEEEECC
Confidence 997641 1 123345666554 223322 235778899999999999998877 8999984
Q ss_pred CeEEE--ec----------CCceE----EeceEEEEcchhhhHh
Q psy16425 129 GGELI--AQ----------GNGQE----DFPFFKRTKKKKKKKK 156 (163)
Q Consensus 129 ~~~~~--~~----------~~~~~----~~~~l~i~~v~~~~~~ 156 (163)
+..+. .. .+... ....|+|.+++.+|.+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 225 (257)
T 3gkz_A 182 GSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAA 225 (257)
T ss_dssp TSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCE
Confidence 22221 10 11111 1235999999999875
No 153
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.65 E-value=1.2e-14 Score=99.64 Aligned_cols=152 Identities=14% Similarity=0.195 Sum_probs=97.6
Q ss_pred ceeEEEeeeec--cCCCEEEEEEcC-CceEEee---------eeeEEecCCeEEEEeCC-CceEEEEEcccCCCCCeEEE
Q psy16425 3 ARMLIEIGEML--MAESTVAWLRVD-TQTILTI---------QTHVITKNHRIGVTHSE-TKAWYLHIREVRESDRGWYM 69 (163)
Q Consensus 3 ~~~~~~~~~~~--~~~~~i~W~k~~-~~~~~~~---------~~~~~~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~ 69 (163)
..+.|.|...+ .+.+.|.||+.. +...... ........+|+.+.... .+.++|.|.+++.+|+|.|.
T Consensus 17 ~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~ 96 (253)
T 3uzq_A 17 ASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHLSSLTSGDTAVYY 96 (253)
T ss_dssp CCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEE
T ss_pred CcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEeCCCCcccCEEEE
Confidence 46888898776 347899999943 2222111 01111234677776544 35778999999999999999
Q ss_pred EEEEeCCCc--eEeEEEEEEc---------------CCcccccCCCCcEEEeCCCcEEEEeEeccCCCC----eEEEEEC
Q psy16425 70 CQVNTDPMK--SQVGYLEVVV---------------PPDILDYPTSTDMVIREGSNVTLKCAASGSPKP----NITWRRE 128 (163)
Q Consensus 70 C~~~~~~~~--~~~~~l~v~~---------------~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p----~v~W~~~ 128 (163)
|.+.+.... .....|.|.. ++.+...+ ....+.+|+++.|.|.+.+.|.+ .+.|+++
T Consensus 97 C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p--~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~ 174 (253)
T 3uzq_A 97 CSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTP--ASLAVSLGQRATISCRASENVDRYGNSFMHWYQQ 174 (253)
T ss_dssp EEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEEC--SEEEECTTSCEEEEEEESSCCEETTEECEEEEEE
T ss_pred EEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcC--CeEEEeCCCCEEEEEEecCccccCCCcEEEEEEE
Confidence 999664322 2345666664 23333322 35778899999999999998876 8999984
Q ss_pred --CeEEE--ec----------CCceE----EeceEEEEcchhhhHh
Q psy16425 129 --GGELI--AQ----------GNGQE----DFPFFKRTKKKKKKKK 156 (163)
Q Consensus 129 --~~~~~--~~----------~~~~~----~~~~l~i~~v~~~~~~ 156 (163)
+..+. .. .+... ....|+|.+++.+|.+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG 220 (253)
T 3uzq_A 175 KAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVA 220 (253)
T ss_dssp CTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCE
Confidence 22211 00 11111 1235999999999875
No 154
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.64 E-value=2e-15 Score=100.03 Aligned_cols=126 Identities=23% Similarity=0.319 Sum_probs=80.3
Q ss_pred ceeEEEeeee----ccCCCEEEEEEcCCceEEeee-ee---EEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEe
Q psy16425 3 ARMLIEIGEM----LMAESTVAWLRVDTQTILTIQ-TH---VITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNT 74 (163)
Q Consensus 3 ~~~~~~~~~~----~~~~~~i~W~k~~~~~~~~~~-~~---~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~ 74 (163)
.++.|.|... +.|.+.+.|++ ++..+.... .. .....+|..+.. .++.+|.|.+++.+|+|.|.|.+.+
T Consensus 10 ~~v~L~C~~~~~~~~~~~~~~~W~~-~~~~i~~~~~~~~~~~~~~~~r~~~~~--~~~~~L~I~~v~~~D~G~Y~C~~~~ 86 (201)
T 1dr9_A 10 EVATLSCGHNVSVEELAQTRIYWQK-EKKMVLTMMSGDMNIWPEYKNRTIFDI--TNNLSIVILALRPSDEGTYECVVLK 86 (201)
T ss_dssp SCEEECCSCCCCTTHHHHCEEEEEE-TTEEEEEEETTEEEECHHHHTTEEEES--TTTTEEEECSCCGGGCEEEEEEEEE
T ss_pred CCEEEecccCCCcccccccEEEEEe-CCcEEEEEeCCceeecCcccceeEEcc--CCCcEEEEecccchhCeEEEEEEEc
Confidence 4678888874 45778999999 455443211 11 001233444422 2345899999999999999999977
Q ss_pred CC-Cc-----eEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEec-cCCCCeEEEEECCeEEEe
Q psy16425 75 DP-MK-----SQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAAS-GSPKPNITWRREGGELIA 134 (163)
Q Consensus 75 ~~-~~-----~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~-~~p~p~v~W~~~~~~~~~ 134 (163)
.. .. ...+.|.|..++..+. ........|+.+.|.|.+. |+|.|.+.|++++..+..
T Consensus 87 ~~g~~~~~~~~~~~~l~V~~~~~~p~---~~~~~~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~ 150 (201)
T 1dr9_A 87 YEKDAFKREHLAEVTLSVKADFPTPS---ISDFEIPTSNIRRIICSTSGGFPEPHLSWLENGEELNA 150 (201)
T ss_dssp CCTTSCEEEEEEEEEEEEECCCCCCE---EEEEECSSTTEEEEEEEEEEESSCEEEEEEESSCEECC
T ss_pred CCCCccccccccEEEEEEcCCCCCCc---eEeccCCCCCeEEEEEecCCccCCCEEEEEECCEECcc
Confidence 52 22 2344555554422111 0111224588899999995 999999999999887753
No 155
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.64 E-value=3.8e-17 Score=116.07 Aligned_cols=139 Identities=15% Similarity=0.226 Sum_probs=47.0
Q ss_pred eeEEEeeeecc-CCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCceEeE
Q psy16425 4 RMLIEIGEMLM-AESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKSQVG 82 (163)
Q Consensus 4 ~~~~~~~~~~~-~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~ 82 (163)
.+.|.|...+. |.+.|.|++ ++..+. ...|+... +.+|.|.+++.+|+|.|+|.+.+.+.....+
T Consensus 25 ~v~l~C~~~~~~p~~~v~W~k-~g~~~~--------~~~~~~~~-----~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~~~ 90 (334)
T 1ry7_B 25 AVELSCPPPGGGPMGPTVWVK-DGTGLV--------PSERVLVG-----PQRLQVLNASHEDSGAYSCRQRLTQRVLCHF 90 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cEEEEeeCCCCCCCcceEEEE-CCeeCC--------CcccEEec-----cceEEEeecccccCEEEEEEEEeCCeEEEEE
Confidence 57788888766 578999999 554442 12333332 2389999999999999999997663334444
Q ss_pred EEEEEcCC----------------------cccccC--CCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCc
Q psy16425 83 YLEVVVPP----------------------DILDYP--TSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNG 138 (163)
Q Consensus 83 ~l~v~~~p----------------------~~~~~~--~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~ 138 (163)
.|.|...+ .+.... ......+.+|+.+.|.|.+.|.|.|.+.|++++..+......
T Consensus 91 ~l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~ 170 (334)
T 1ry7_B 91 SVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRI 170 (334)
T ss_dssp ----------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTSST
T ss_pred EEEEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEECCEECcccccc
Confidence 55554432 221111 112356889999999999999999999999999877544332
Q ss_pred e-----EEeceEEEEcchhhhHh
Q psy16425 139 Q-----EDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 139 ~-----~~~~~l~i~~v~~~~~~ 156 (163)
. .....|.|.+++.+|.+
T Consensus 171 ~~~~~~~~~~~L~i~~v~~~d~G 193 (334)
T 1ry7_B 171 GGIKLRHQQWSLVMESVVPSDRG 193 (334)
T ss_dssp TCCCCCTTTTEEEECSCCGGGCC
T ss_pred cceecccceEEEEECCCCcccCE
Confidence 1 13457999999998876
No 156
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.64 E-value=5e-15 Score=111.17 Aligned_cols=146 Identities=11% Similarity=0.141 Sum_probs=91.8
Q ss_pred ceeEEEeeeecc-CCC-EEEEEEcCCceEEeeee-eEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCc
Q psy16425 3 ARMLIEIGEMLM-AES-TVAWLRVDTQTILTIQT-HVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMK 78 (163)
Q Consensus 3 ~~~~~~~~~~~~-~~~-~i~W~k~~~~~~~~~~~-~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~ 78 (163)
..+.|.|...+. |.+ .|.|++ ++..+..... ......+.+.. ...|.|.+++.+| |.|+|.+.|. +..
T Consensus 235 ~~~~l~C~~~g~~P~p~~v~W~k-~g~~~~~~~~~~~~~~~g~~~~------~s~L~i~~~~~~d-G~Y~C~a~n~~g~~ 306 (523)
T 2rcj_C 235 GTAALGCLVKDYFPQPVTVSWNS-GALTSGVHTFPAVLQSSGLYSL------SSVVTVPSSSLGT-QTYICNVNHKPSNT 306 (523)
T ss_pred CceEEEEEEeceeCCCeEEEEec-CCcccceEeCCcEecCCCcEEE------EEEEEechhhcCC-ceEEEEEEeCCCCc
Confidence 367888888776 767 899999 4443311110 00111122221 2379999999999 9999999776 333
Q ss_pred eEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCC----CeEEEEECCeEEEecCCce---------EEeceE
Q psy16425 79 SQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPK----PNITWRREGGELIAQGNGQ---------EDFPFF 145 (163)
Q Consensus 79 ~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~----p~v~W~~~~~~~~~~~~~~---------~~~~~l 145 (163)
.....+.+...|.+...++.....+.+|+.+.|.|.+.|.|+ +.+.|++++..+....... ...+.|
T Consensus 307 ~~~~~l~v~~~P~~~~~~p~~~~~v~~g~~~~l~C~~~g~~p~~~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L 386 (523)
T 2rcj_C 307 KVDKRVEPLSLPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPQVKFNWYVDGVQVHNAKTKPREQQYNSTYRVVSVL 386 (523)
T ss_pred ceEEecCCCcCceEEecCCCchhhcccCCceEEEEEEecccCCCCceEEEEEECCeEccCCccCCceecCCCcEEEEEEE
Confidence 444555555555543333222223678999999999998654 4899999998875443211 122357
Q ss_pred EEEcchhhhHh
Q psy16425 146 KRTKKKKKKKK 156 (163)
Q Consensus 146 ~i~~v~~~~~~ 156 (163)
.|..+..+|.+
T Consensus 387 ~i~~~~~~d~G 397 (523)
T 2rcj_C 387 TVLHQNWLDGK 397 (523)
T ss_pred EECHHHhcCCC
Confidence 77777777754
No 157
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.64 E-value=1.6e-15 Score=109.59 Aligned_cols=139 Identities=14% Similarity=0.117 Sum_probs=99.5
Q ss_pred eeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCC------CeEEEEEEEeCCC
Q psy16425 4 RMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESD------RGWYMCQVNTDPM 77 (163)
Q Consensus 4 ~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d------~G~Y~C~~~~~~~ 77 (163)
.+.|.|...+.|.+.|.|++.++..+... .........+ +|.|.+++.+| +|.|+|.+.+...
T Consensus 21 ~v~l~C~~~g~p~p~v~W~k~~g~~~~~~-------~~~~~~~~~~----~L~i~~~~~~d~~~~~d~G~Y~C~a~n~~g 89 (388)
T 2v5m_A 21 GAEIECKASGNPMPEIIWIRSDGTAVGDV-------PGLRQISSDG----KLVFPPFRAEDYRQEVHAQVYACLARNQFG 89 (388)
T ss_dssp CEEEECEEEEESCCEEEEEETTSCBCCCB-------TTTBEECSTT----EEEECCCCGGGCCHHHHEEEEEEEEEETTE
T ss_pred cEEEEEECCCCCCCEEEEEcCCCCccccC-------CCceEEcCCc----eEEecccChhhccccccCceEEEEEEccCC
Confidence 58899999999999999999555544211 1111222222 79999999997 9999999977632
Q ss_pred c--eEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCC---CeEEEEECCeEEEecC-----Cce-EEeceEE
Q psy16425 78 K--SQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPK---PNITWRREGGELIAQG-----NGQ-EDFPFFK 146 (163)
Q Consensus 78 ~--~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~---p~v~W~~~~~~~~~~~-----~~~-~~~~~l~ 146 (163)
. +..+.+.+.++|.+...+ ....+.+|+.+.|.|.+.+.|. +.+.|++++..+.... +.. ..++.|.
T Consensus 90 ~~~s~~~~v~v~~~p~~~~~~--~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~ 167 (388)
T 2v5m_A 90 SIISRDVHVRAVVAQYYEADV--NKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDGKYLVLPSGELH 167 (388)
T ss_dssp EEECCCEEEEEECCCCCCCBC--CCEEEETTSCEEECCBCCTTTTTTEEEEEEEETTCCEECSSSCBTTTEEECTTSCEE
T ss_pred eEEecceEEEEccccccccCc--cceeeecCCcEEEEEECcCCCCCCcceEEEEeCCCcccccccCCCCcEEEccCCcEE
Confidence 2 345667777777665543 3567889999999999987653 6899999988764321 111 2346899
Q ss_pred EEcchhhhH
Q psy16425 147 RTKKKKKKK 155 (163)
Q Consensus 147 i~~v~~~~~ 155 (163)
|.+++.+|.
T Consensus 168 i~~v~~~d~ 176 (388)
T 2v5m_A 168 IREVGPEDG 176 (388)
T ss_dssp ESSCCGGGG
T ss_pred EecCCcccc
Confidence 999999987
No 158
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.64 E-value=1.9e-14 Score=93.42 Aligned_cols=120 Identities=13% Similarity=0.124 Sum_probs=79.8
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEE----ecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCc
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVI----TKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMK 78 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~----~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~ 78 (163)
.++.|.|... .|.+.|.|++. +..+........ ...+|+.+.. .+.+|.|.+++.+|+|.|.|.+.+...
T Consensus 11 ~~VtL~c~~~-~~~~~i~W~~~-~~~i~~~~~~~~~~~~~~~~R~~~~~---~~~sL~I~~v~~~DsG~Y~C~~~n~~~- 84 (171)
T 1ccz_A 11 GNVTFHVPSN-VPLKEVLWKKQ-KDKVAELENSEFRAFSSFKNRVYLDT---VSGSLTIYNLTSSDEDEYEMESPNITD- 84 (171)
T ss_dssp CCEEECCCCS-SCCSCEEEEET-TEEEEEEETTEEEECGGGTTSEEECT---TTCCEEECSCCGGGCEEEEEECTTCCS-
T ss_pred CCEEEcCCCC-CCcceEEEEeC-CcEEEEEcCCCcccccccCCcEEEeC---CCCeEEECCCChhhCceEEEEEeCCCC-
Confidence 4688888874 48899999994 433332211111 1345665532 234899999999999999999965433
Q ss_pred eEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEec
Q psy16425 79 SQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQ 135 (163)
Q Consensus 79 ~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~ 135 (163)
...+.|.|..++..+. ..... ....|.|.+.+.|.|.++|++++..+...
T Consensus 85 ~~~~~L~V~~~~~~p~------i~~~~-~~~~L~C~~~~~p~p~i~W~~~~~~l~~~ 134 (171)
T 1ccz_A 85 TMKFFLYVLEMVSKPM------IYWEC-SNATLTCEVLEGTDVELKLYQGKEHLRSL 134 (171)
T ss_dssp CEEEEEEEECCCCCCE------EEEET-TTTEEEEECSSCSSCEEEEEETTEEEEEE
T ss_pred cEEEEEEEECcCCCCE------EEEec-CCcEEEEEeCCCCCcEEEEEECCEECcCC
Confidence 6667787776543211 11111 11379999999899999999999887543
No 159
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.64 E-value=1.2e-14 Score=97.81 Aligned_cols=151 Identities=17% Similarity=0.354 Sum_probs=93.7
Q ss_pred ceeEEEeeeec--cCCCEEEEEEcCC-ceEEee---ee--------eEEecCCeEEEEeCC-CceEEEEEcccCCCCCeE
Q psy16425 3 ARMLIEIGEML--MAESTVAWLRVDT-QTILTI---QT--------HVITKNHRIGVTHSE-TKAWYLHIREVRESDRGW 67 (163)
Q Consensus 3 ~~~~~~~~~~~--~~~~~i~W~k~~~-~~~~~~---~~--------~~~~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~ 67 (163)
.++.|.|...+ .+.+.|.||+... ...... .. ......+|+.+..+. .++++|.|.+++.+|+|.
T Consensus 16 ~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~ 95 (221)
T 3m8o_H 16 GSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQMNSLKSDDTAM 95 (221)
T ss_dssp CCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEECSCCGGGCEE
T ss_pred CCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEECCCCHHHCEE
Confidence 46888898775 3468999998542 111110 00 011234788777554 467889999999999999
Q ss_pred EEEEEEeCC---CceEeEEEEEEc----CCcccccCCCCcEEEeCCCcEEEEeEecc-CCC-C-eEEEEECCeEEEec--
Q psy16425 68 YMCQVNTDP---MKSQVGYLEVVV----PPDILDYPTSTDMVIREGSNVTLKCAASG-SPK-P-NITWRREGGELIAQ-- 135 (163)
Q Consensus 68 Y~C~~~~~~---~~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~-p-~v~W~~~~~~~~~~-- 135 (163)
|.|.+.+.. .......|.|.. +|.+...... .. .+|+.+.|.|.+.+ .|. + .+.|++++..+...
T Consensus 96 Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~-~~--~~g~~v~L~C~~~~~~P~~~~~v~W~~~g~~~~~~~~ 172 (221)
T 3m8o_H 96 YYCVIRGDVYNRQWGQGTLVTVSSASPTSPKVFPLSLC-ST--QPDGNVVIACLVQGFFPQEPLSVTWSESGQGVTARNF 172 (221)
T ss_dssp EEEEEESCTTCCCBBCCEEEEECSCCCBCCEEEEEECC-SC--CCTTEEEEEEEEEEEBSSCSEEEEESCCSTTCEEEEC
T ss_pred EEEEEECCChhheECCCEEEEEecCCCCCCeEEEecCc-cc--ccCCCEEEEEEEEeeECCCCEEEEEEECCEECceEEc
Confidence 999996642 223345666652 2333211111 11 67999999999987 776 4 89999988765221
Q ss_pred -------CCceEEeceEEEEcchhhhHh
Q psy16425 136 -------GNGQEDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 136 -------~~~~~~~~~l~i~~v~~~~~~ 156 (163)
.........|+|..+..+|++
T Consensus 173 ~~~~~~~~~~~~~~s~L~i~~~~~~d~g 200 (221)
T 3m8o_H 173 PPSQDASGDLYTTSSQLTLPATQCLAGK 200 (221)
T ss_dssp CCEECSSSSCEEEEEEEEEEGGGSCTTC
T ss_pred CceeeCCCCcEEEEEEEEECHHHcCCCC
Confidence 111112245778877766543
No 160
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.64 E-value=4.5e-15 Score=99.17 Aligned_cols=112 Identities=21% Similarity=0.228 Sum_probs=82.8
Q ss_pred cceeEEEeeeeccCCC--EEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCC-Cc
Q psy16425 2 AARMLIEIGEMLMAES--TVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDP-MK 78 (163)
Q Consensus 2 ~~~~~~~~~~~~~~~~--~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~-~~ 78 (163)
...+.|.|.+ +.|.| .|.|++.+... ++.... .+...|.|.+++.+|+|.|.|.+.+.. ..
T Consensus 22 G~sv~L~C~a-~~p~P~~~i~W~~~~~~l------------~~~~~~---~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~ 85 (210)
T 1gsm_A 22 GASRQLTCRL-ACADRGASVQWRGLDTSL------------GAVQSD---TGRSVLTVRNASLSAAGTRVCVGSCGGRTF 85 (210)
T ss_dssp TCCEEEEEEE-CCSSTTCEEEEESSTTTT------------CCEEEE---SSEEEEEECSCCGGGCEEEEEEEEETTEEE
T ss_pred CCCEEEEEEC-CCCCCCcceEEeeccccc------------CcEEec---CCccEEEECccCcccCceEEEEEEeCCCce
Confidence 3568899988 78878 99999954321 122211 123489999999999999999997764 33
Q ss_pred eEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEecc-CCCC----eEEEEECCeEEE
Q psy16425 79 SQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASG-SPKP----NITWRREGGELI 133 (163)
Q Consensus 79 ~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p----~v~W~~~~~~~~ 133 (163)
...+.|.|..+|....... . .+.+|+.+ |.|.+.+ .|.+ .+.|++++.++.
T Consensus 86 ~~~~~ltV~~~P~~~~i~~--~-~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~ 141 (210)
T 1gsm_A 86 QHTVQLLVYAFPNQLTVSP--A-ALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELE 141 (210)
T ss_dssp EEEEEEEEEBCCSEEEEES--S-SBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECT
T ss_pred EEEEEEEEEecCCCcEEcc--c-eEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEcc
Confidence 4577899999987655432 1 46678888 9999987 4754 799999999874
No 161
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.63 E-value=8.8e-15 Score=100.32 Aligned_cols=129 Identities=15% Similarity=0.129 Sum_probs=91.7
Q ss_pred ceeEEEeee-eccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCC-CceE
Q psy16425 3 ARMLIEIGE-MLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDP-MKSQ 80 (163)
Q Consensus 3 ~~~~~~~~~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~-~~~~ 80 (163)
..+.|.|.. .+.|.+.+.|++ ++..+... ... ..|.|.+++.+|+|.|+|.+.+.. ..+.
T Consensus 98 ~~v~l~C~~~~~~p~~~v~W~~-~g~~~~~~-------------~~~----~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~ 159 (262)
T 3rjd_A 98 EPLALRCHAWKDKLVYNVLYYR-NGKAFKFF-------------HWN----SNLTILKTNISHNGTYHCSGMGKHRYTSA 159 (262)
T ss_dssp SCEEEEEEEGGGCCCEEEEEEE-TTEEEEEE-------------EEC----CCEEESSCCGGGCEEEEEEEESSSEEEEE
T ss_pred CeEEEEEEccCCCCCceEEEEE-CCcccccc-------------CCC----CeEEEEECChhhCEEEEEEEeCCCCcccc
Confidence 357788888 677889999999 55554211 011 279999999999999999997653 3344
Q ss_pred eEEEEEEc---CCcccccCCCCcEEEeCCCcEEEEeEeccCCC-Ce----EEEEECCeEEEecCCceEEeceEEEEcchh
Q psy16425 81 VGYLEVVV---PPDILDYPTSTDMVIREGSNVTLKCAASGSPK-PN----ITWRREGGELIAQGNGQEDFPFFKRTKKKK 152 (163)
Q Consensus 81 ~~~l~v~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~-p~----v~W~~~~~~~~~~~~~~~~~~~l~i~~v~~ 152 (163)
.+.|.|.. +|.+...+ ...+.+|+.+.|.|.+.+.|. |. +.|++++..+... .....|+|.+++.
T Consensus 160 ~~~l~V~~~~~~p~~~~~~---~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~~~~~~~~----~~~~~L~i~~v~~ 232 (262)
T 3rjd_A 160 GISVTVKELFPAPVLNASV---TSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGR----NTSSEYQILTARR 232 (262)
T ss_dssp CEEEEEECSSCCCEEEESS---CSSEETTCCEEEEEECCCCCC-----EEEEEEETTEEEEEE----ESCCEEEESSCCG
T ss_pred ceEEEeccCCCCCeEeecC---ceeecCCCeEEEEeEcccCCCCCCccEEEEEEeCCcEeccc----CCCceEEEEEech
Confidence 45677765 23333322 345778999999999999876 53 7899999887533 3446799999999
Q ss_pred hhHh
Q psy16425 153 KKKK 156 (163)
Q Consensus 153 ~~~~ 156 (163)
+|.+
T Consensus 233 ~d~G 236 (262)
T 3rjd_A 233 EDSG 236 (262)
T ss_dssp GGCE
T ss_pred hhCe
Confidence 8875
No 162
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.63 E-value=2.9e-15 Score=110.22 Aligned_cols=116 Identities=9% Similarity=0.117 Sum_probs=73.8
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.|.|...+.|.+.|.|++. +..+.. ...+ ........+|.|.+++.+|+|.|+|.+.|. +.....
T Consensus 64 ~~v~L~C~v~g~P~p~i~W~~~-~~~l~~--------~~~~--~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~~~~~ 132 (423)
T 3qs7_E 64 ASITLQVLVDAPGNISCLWVFK-HSSLNC--------QPHF--DLQNRGVVSMVILKMTETQAGEYLLFIQSEATNYTIL 132 (423)
T ss_dssp CCEEEEEECSCCSSCEEEEEET-TEEECC--------CCBC-------CEEEEEESSCCSSSCSEEEEEEEC--CEEEEE
T ss_pred CcEEEEEEEEcCCCCeEEEEEC-CCccCc--------ccee--ccccceEEEEEEeecCcccCEEEEEEEEcCCCcEEEE
Confidence 4688999999999999999994 433211 0000 001112347999999999999999999776 333445
Q ss_pred EEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEE
Q psy16425 82 GYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGEL 132 (163)
Q Consensus 82 ~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~ 132 (163)
+.|.|..+|.+... .......|+.+.|.|.+.|+|.|.++|++++..+
T Consensus 133 ~~l~V~~~p~~~~~---~p~~~~~~~~~~L~C~a~G~P~P~i~W~k~~~~~ 180 (423)
T 3qs7_E 133 FTVSIRNTLLYTLR---RPYFRKMENQDALVCISESVPEPIVEWVLCDSQG 180 (423)
T ss_dssp EEEEEC-----CEE---EEEEEECSSSSCEEEEEEESSCCEEEEEEC----
T ss_pred EEEEEecCcccccc---CCcEeccCCceEEEEEEeeecCCeEEEEECCCCC
Confidence 55666655543211 1223456888899999999999999999988754
No 163
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.63 E-value=2.6e-15 Score=114.12 Aligned_cols=147 Identities=15% Similarity=0.152 Sum_probs=93.8
Q ss_pred ceeEEEeee-eccCCCEEEEEEcCCceEEeeeee---EEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCc
Q psy16425 3 ARMLIEIGE-MLMAESTVAWLRVDTQTILTIQTH---VITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMK 78 (163)
Q Consensus 3 ~~~~~~~~~-~~~~~~~i~W~k~~~~~~~~~~~~---~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~ 78 (163)
..+.|.|.. .+.|.+.|.|++.+.......... .....+|..+...+ +|.|.+++.+|+|.|+|.+.+....
T Consensus 382 ~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~----~L~i~~v~~~D~G~Y~C~~~n~~~~ 457 (581)
T 3o3u_N 382 EPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNG----SLFLPAVGIQDEGIFRCQAMNRNGK 457 (581)
T ss_dssp SCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTS----CEEESSCCGGGCEEEEEEEECTTSC
T ss_pred CcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCc----eEEEeccccccCeEEEEEEEcCCCc
Confidence 468888988 788999999999543211110000 00113344444443 8999999999999999999766332
Q ss_pred --eEeEEEEEEcCCcccccCCCCcEEEeCCCc-EEEEeEecc-CCCCeEEEEECCeEEEecCCce---------------
Q psy16425 79 --SQVGYLEVVVPPDILDYPTSTDMVIREGSN-VTLKCAASG-SPKPNITWRREGGELIAQGNGQ--------------- 139 (163)
Q Consensus 79 --~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~-~~l~C~~~~-~p~p~v~W~~~~~~~~~~~~~~--------------- 139 (163)
...+.|.|..+|..+........ +.+|+. +.|.|.+.+ +|.|.++|++++..+.......
T Consensus 458 ~~~~~~~l~V~~~~~~p~i~~~~~~-~~~~~~~~~l~C~~~~~~P~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~g~y 536 (581)
T 3o3u_N 458 ETKSNYRVRVYQIPGKPEIVDSASE-LTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPLVPNEKGVSVKEQTRRHPETGLF 536 (581)
T ss_dssp EEEEEEEEEEEBCCCCCEEESCCSE-ECTTSCEEEEEEEEEEEBSCCEEEEEETTEECCTTSTTEEEEEEEEECTTTCCE
T ss_pred eeEEEEEEEEEcCCCCCEEEcCCcc-cccCCceeEEEEECCCCCCCCeEEEEECCEECCCCCCeEEEEeeeEEcCCCceE
Confidence 45677888775543332222222 455555 467999987 6999999999998875432221
Q ss_pred EEeceEEEEcchhhh
Q psy16425 140 EDFPFFKRTKKKKKK 154 (163)
Q Consensus 140 ~~~~~l~i~~v~~~~ 154 (163)
.-...|+|..++++|
T Consensus 537 ~~~s~L~i~~~~~~d 551 (581)
T 3o3u_N 537 TLQSELMVTPARGGD 551 (581)
T ss_dssp EEEEEEEECCCTTSC
T ss_pred EEEEEEEEEeccccC
Confidence 012457777777555
No 164
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.63 E-value=3.8e-15 Score=106.52 Aligned_cols=150 Identities=13% Similarity=0.181 Sum_probs=94.9
Q ss_pred ceeEEEeeeecc--CCCEEEEEEcC-CceEEeeee-------e--EEecCCeEEEEeCC-CceEEEEEcccCCCCCeEEE
Q psy16425 3 ARMLIEIGEMLM--AESTVAWLRVD-TQTILTIQT-------H--VITKNHRIGVTHSE-TKAWYLHIREVRESDRGWYM 69 (163)
Q Consensus 3 ~~~~~~~~~~~~--~~~~i~W~k~~-~~~~~~~~~-------~--~~~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~ 69 (163)
.++.|.|...+. +.+.|.||+.+ +..+..... . .....+|+.+..+. .+.++|.|.+++.+|+|.|.
T Consensus 16 ~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 95 (344)
T 1za6_B 16 ASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSSLRSEDTAVYF 95 (344)
T ss_dssp CCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECSCCGGGCEEEE
T ss_pred CcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECCCCcccCEEEE
Confidence 467888888765 46889999963 332211100 0 01134677776543 35679999999999999999
Q ss_pred EEEEeCC-CceEeEEEEEEc----CCcccccCCCCcEEEeCCCcEEEEeEeccC-CC-CeEEEEECCeEEE--e------
Q psy16425 70 CQVNTDP-MKSQVGYLEVVV----PPDILDYPTSTDMVIREGSNVTLKCAASGS-PK-PNITWRREGGELI--A------ 134 (163)
Q Consensus 70 C~~~~~~-~~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-p~v~W~~~~~~~~--~------ 134 (163)
|.+.+.. .......|.|.. +|.+...+. ...+.+|+.+.|.|.+.|. |. +.+.|++++..+. .
T Consensus 96 C~~~n~~~~~~~~~~l~V~~~~~~~P~i~~~~~--~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~ 173 (344)
T 1za6_B 96 CTRSLNMAYWGQGTLVTVSSASTKGPSVFPLAP--SSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQ 173 (344)
T ss_dssp EEETTTTCEECCCEEEEECSSCCBCCEEEEECC--SCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBCTTEEECCCEEC
T ss_pred EEEecCcceecCcEEEEEecCCCCCCeEEEccc--cccccCCCcEEEEEEEeeEECCCeEEEEecCCccCceeECCCeEC
Confidence 9996642 223345677763 333332221 1224689999999999986 65 7999999986521 0
Q ss_pred cCCceEEeceEEEEcchhhh
Q psy16425 135 QGNGQEDFPFFKRTKKKKKK 154 (163)
Q Consensus 135 ~~~~~~~~~~l~i~~v~~~~ 154 (163)
..........|+|..+..+|
T Consensus 174 ~~~~~~~~s~L~i~~~~~~d 193 (344)
T 1za6_B 174 SSGLYSLSSVVTVPSSSLGT 193 (344)
T ss_dssp TTSCEEEEEEEEEETTHHHH
T ss_pred CCCCEEEEEEEEEcHHHcCC
Confidence 11111223478888888766
No 165
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.63 E-value=8.8e-16 Score=111.34 Aligned_cols=140 Identities=14% Similarity=0.154 Sum_probs=96.3
Q ss_pred eeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEccc-CCCCCeEEEEEEEeCCCc--eE
Q psy16425 4 RMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREV-RESDRGWYMCQVNTDPMK--SQ 80 (163)
Q Consensus 4 ~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v-~~~d~G~Y~C~~~~~~~~--~~ 80 (163)
.+.|.|...+.|.|.|.|++ ++..+... ...++... .+ +|.|.++ +.+|+|.|+|.+.|.... +.
T Consensus 25 ~v~L~C~~~g~P~p~i~W~k-~g~~l~~~------~~~~~~~~-~g----~l~i~~~~~~~D~G~Y~C~A~N~~G~~~s~ 92 (384)
T 3kld_A 25 KVKLSCEVKGNPKPHIRWKL-NGTDVDIG------MDFRYSVV-DG----SLLINNPNKTQDAGTYQCIATNSFGTIVSR 92 (384)
T ss_dssp EEEECCEEEEESCCEEEEEE-TTEECCC----------CEEEE-TT----EEEEESCCHHHHCEEEEEEEEETTEEEECC
T ss_pred eEEEEeEecCCCCCEEEEEE-CCEECcCC------CCccEEEE-CC----EEEEcCCCCcccCEEEEEEEEcCcccEEec
Confidence 58899999999999999999 56554211 12333332 22 6777765 789999999999876322 23
Q ss_pred eEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEec-cCCCCeEEEEECCeEEEecCCceE--EeceEEEEcchhhhHh
Q psy16425 81 VGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAAS-GSPKPNITWRREGGELIAQGNGQE--DFPFFKRTKKKKKKKK 156 (163)
Q Consensus 81 ~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~-~~p~p~v~W~~~~~~~~~~~~~~~--~~~~l~i~~v~~~~~~ 156 (163)
.+.+.+...+.+...+. ....+.+|+.+.|.|... +.|.+.+.|++++.++....+... ..+.|.|.+|+.+|.+
T Consensus 93 ~~~l~v~~~~~~~~~~~-~~~~v~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 170 (384)
T 3kld_A 93 EAKLQFAYLENFKTRTR-STVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVG 170 (384)
T ss_dssp CEEEEEEEECCCSCCCC-CCEEEEETCCEEECCCCCSEESCEEEEEEETTEECCCSSSEEECTTTCCEEESSCCGGGCE
T ss_pred ceEEEEecccccccCCC-CceeEEcCCCeEEecCCCCCCCCeEEEEEECCCCCEeeccEEEEcCCCcEEEeecCHHHCc
Confidence 45566655444433222 356788999999999764 567789999999987654333222 3467999999999876
No 166
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.63 E-value=2e-15 Score=113.42 Aligned_cols=141 Identities=16% Similarity=0.188 Sum_probs=100.9
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCe-EEEEEEEeCCC--ce
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRG-WYMCQVNTDPM--KS 79 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G-~Y~C~~~~~~~--~~ 79 (163)
..+.|.|...+.+.+.|.||+.++..+ ....++.....+ .|.|.+++.+|+| .|+|.+.+... .+
T Consensus 130 ~~v~l~C~~~~~~~~~v~W~~~~g~~l--------~~~~~~~~~~~~----~L~i~~~~~~d~G~~Y~C~a~n~~~~~~s 197 (524)
T 2ec8_A 130 NDTLVRCPLTDPEVTNYSLKGCQGKPL--------PKDLRFIPDPKA----GIMIKSVKRAYHRLCLHCSVDQEGKSVLS 197 (524)
T ss_dssp SCEEECCCBSCCCCSCEEEECSSSCCC--------CSSCEEEEETTT----EEEEESCCGGGTTCEEEEEEC----CCCC
T ss_pred CeEEEECcCCCCccceEEEEccCCcCc--------CCCCceeECCCc----cEEEeccchhhCCceEEEEEEECCceEEE
Confidence 367888988887779999998556554 223445544444 7999999999999 99999966532 23
Q ss_pred EeEEEEEE----cCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCe-EEEEECCeEE--EecCC-------ceEEeceE
Q psy16425 80 QVGYLEVV----VPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPN-ITWRREGGEL--IAQGN-------GQEDFPFF 145 (163)
Q Consensus 80 ~~~~l~v~----~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~-v~W~~~~~~~--~~~~~-------~~~~~~~l 145 (163)
..+.|.|. .+|.+...+ ....+.+|+++.|.|.+.+.|.|. +.|++++..+ ..... .....+.|
T Consensus 198 ~~~~l~V~~~~~~~p~i~~~~--~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 275 (524)
T 2ec8_A 198 EKFILKVRPAFKAVPVVSVSK--ASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATL 275 (524)
T ss_dssp CCEECCEECCCCSCCEEECSC--SEEEEETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEE
T ss_pred EEEEEEEEeCCCCCCcEEecC--CcceEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCccccccccccccCCccceEEEE
Confidence 35677776 456655543 355789999999999999999887 9999998772 21111 12356789
Q ss_pred EEEcchhhhHhh
Q psy16425 146 KRTKKKKKKKKK 157 (163)
Q Consensus 146 ~i~~v~~~~~~~ 157 (163)
.|.+++.+|.+.
T Consensus 276 ~I~~~~~~D~G~ 287 (524)
T 2ec8_A 276 TISSARVNDSGV 287 (524)
T ss_dssp EESSCCTTTCEE
T ss_pred EECCCCHHHCEE
Confidence 999999988753
No 167
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.63 E-value=2.9e-16 Score=110.45 Aligned_cols=142 Identities=15% Similarity=0.103 Sum_probs=93.9
Q ss_pred eeEEEee-eeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCc--e
Q psy16425 4 RMLIEIG-EMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMK--S 79 (163)
Q Consensus 4 ~~~~~~~-~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~--~ 79 (163)
.+.+.|. ..+.|.+.|.|++ ++..+..... ......... ...|.|.++...|+|.|+|.+.+. +.. .
T Consensus 131 ~~~l~C~~~~g~P~~~i~W~~-~~~~~~~~~~--~~~~~~~~~------~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 201 (308)
T 4fom_A 131 TVAAICIAATGKPVAHIDWEG-DLGEMESTTT--SFPNETATI------ISQYKLFPTRFARGRRITCVVKHPALEKDIR 201 (308)
T ss_dssp EEEEEEEEEEEBSCCEEEECC-CSSBCCEEEE--ECTTSCEEE------EEEEEECCCGGGTTCEEEEEEECTTCSSCEE
T ss_pred eEEEEEEecCCcCCceEEEEE-CCcccccccc--eeeeecccc------cccceEEeeeecCCccEEEEEEccCCCCceE
Confidence 4667776 4688999999999 4444322111 111121111 126999999999999999999775 333 3
Q ss_pred EeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCC-eEEEEECCeEEEecCCceEEeceEEEEcchhhhHh
Q psy16425 80 QVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKP-NITWRREGGELIAQGNGQEDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 80 ~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p-~v~W~~~~~~~~~~~~~~~~~~~l~i~~v~~~~~~ 156 (163)
..+.|.|..+|.+...+. ....+.+|+.+.|.|.+.|+|+| .+.|++++..+... ....++..+.|.+++.+|++
T Consensus 202 ~~~~l~V~~~P~~~~~~~-~~~~~~~g~~v~l~C~~~g~P~p~~v~W~k~~~~~~~~-~~~~~~~~l~i~~v~~~d~G 277 (308)
T 4fom_A 202 YSFILDIQYAPEVSVTGY-DGNWFVGRKGVNLKCNADANPPPFKSVWSRLDGQWPDG-LLASDNTLHFVHPLTFNYSG 277 (308)
T ss_dssp EEEECCCCEEEEECCBCC-CSCEETTCCSCEEECCEEEESCEEEEECCBSSSCCCSS-CBCSTTEEECCSCCCSCCCS
T ss_pred EeEEEEEecCCeeEEccc-ceeeeeccccEEEEEEEecCCCCcEEEEEECCeECCCc-EEEcCCeEEEECCCChhhCE
Confidence 334555666666554433 34567788999999999999988 69999998776432 12223345567788888765
No 168
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.63 E-value=4.4e-16 Score=104.71 Aligned_cols=151 Identities=19% Similarity=0.265 Sum_probs=94.3
Q ss_pred ceeEEEeeeec-cCCC----EEEEEEcCCce-E--E-eeeeeEEecCCeEEEEeC----CCceEEEEEcccCCCCCeEEE
Q psy16425 3 ARMLIEIGEML-MAES----TVAWLRVDTQT-I--L-TIQTHVITKNHRIGVTHS----ETKAWYLHIREVRESDRGWYM 69 (163)
Q Consensus 3 ~~~~~~~~~~~-~~~~----~i~W~k~~~~~-~--~-~~~~~~~~~~~r~~~~~~----~~~~~~L~i~~v~~~d~G~Y~ 69 (163)
.++.|.|...+ .+.+ .|.|++.+... + + ...+..+...+|+.+... ..++++|.|.+++.+|+|.|+
T Consensus 15 ~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~ 94 (221)
T 3eow_R 15 DSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGLRVEDEGSYT 94 (221)
T ss_dssp SCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCSSCCCCSCBE
T ss_pred CCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccCChHHCeEEE
Confidence 46788888733 3433 49999953211 1 1 111222233567776653 224669999999999999999
Q ss_pred EEEEeC--CCceEeEEEEEEcCCcccccCCCCcEEEeCCCcE-EEEeEec-cCCCCeEEEEECCeEEEe--c-----CCc
Q psy16425 70 CQVNTD--PMKSQVGYLEVVVPPDILDYPTSTDMVIREGSNV-TLKCAAS-GSPKPNITWRREGGELIA--Q-----GNG 138 (163)
Q Consensus 70 C~~~~~--~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~-~l~C~~~-~~p~p~v~W~~~~~~~~~--~-----~~~ 138 (163)
|.+.+. +.....+.|.|..+|.+...+... ..+|+.+ .|.|.+. +.|.|.++|++++..... . ...
T Consensus 95 C~~~~~~~~~~~~~~~L~V~~~P~~~~~~~~~---~~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~ 171 (221)
T 3eow_R 95 CLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKV---QLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQTSQVPGFLSGT 171 (221)
T ss_dssp EEEEESSSCSCEEECCCCCCCCCEEEEEEECC---CCCSSSCCEEEEEEESCSSCCCEEEECSSSCCCCCEEECCCCBTT
T ss_pred EEEEeCCCCceEEEEEEEEEECCCceeecCCc---ccCCceEEEEEEECCCccCCCeeEEEeCCCCCCccceeecCCCCc
Confidence 999764 344555667777777765433221 1578888 4999987 899999999987432211 0 111
Q ss_pred eEEeceEEEEcchhhhHh
Q psy16425 139 QEDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 139 ~~~~~~l~i~~v~~~~~~ 156 (163)
....+.|.|..+..+|.+
T Consensus 172 ~~~~s~L~i~~~~~~d~g 189 (221)
T 3eow_R 172 VTVTSLWILVPSSQVDGK 189 (221)
T ss_dssp BCCEEEEECCCCSCCCCC
T ss_pred EEEEEEEEEeCCHHHCCC
Confidence 112346777777776654
No 169
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.63 E-value=1.5e-16 Score=112.09 Aligned_cols=143 Identities=14% Similarity=0.154 Sum_probs=96.7
Q ss_pred eeEEEeeeeccC-CCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 4 RMLIEIGEMLMA-ESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 4 ~~~~~~~~~~~~-~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
.+.|.|...+.+ .+.|.|++.+...... .....|+..... +|.|.+++.+|+|.|+|.+.+. +.....
T Consensus 22 ~v~L~C~~~~~~~~~~v~W~k~~~~~~~~-----~~~~~~~~~~~~-----~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~ 91 (315)
T 1itb_B 22 IDVRPCPLNPNEHKGTITWYKDDSKTPVS-----TEQASRIHQHKE-----KLWFVPAKVEDSGHYYCVVRNSSYCLRIK 91 (315)
T ss_dssp CCCCBCCCCSCCCSSCCCEECTTSCSCSC-----CCTTSSSEECSS-----BEECTTCCGGGCSCCEECCCSSSCCCCEE
T ss_pred cEEEEeeccCcCCCceEEEEeCCCcCccc-----cccCCcEeccCC-----eEEECCCChhhCEEEEEEEeCCceEEEEE
Confidence 577888887777 7899999954321110 122344443322 7999999999999999999655 222333
Q ss_pred EEEEEE-cCCcccccCC-CCcEEEeCCCcEEEEeEe------ccCCCCeEEEEECCeEEEecCC-ceEEeceEEEEcchh
Q psy16425 82 GYLEVV-VPPDILDYPT-STDMVIREGSNVTLKCAA------SGSPKPNITWRREGGELIAQGN-GQEDFPFFKRTKKKK 152 (163)
Q Consensus 82 ~~l~v~-~~p~~~~~~~-~~~~~~~~g~~~~l~C~~------~~~p~p~v~W~~~~~~~~~~~~-~~~~~~~l~i~~v~~ 152 (163)
..+.+. .+|.+...+. .....+.+|+++.|.|.+ .+.|.|.+.|++++..+..... ....++.|.|.+++.
T Consensus 92 ~~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~~~~~~~~~L~i~~v~~ 171 (315)
T 1itb_B 92 ISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAE 171 (315)
T ss_dssp CCCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSSSEEEETTEEEESSCCG
T ss_pred EEEEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccceEeecCceEEEEecee
Confidence 333333 2343322211 123567889999999998 7899999999999998754322 234667999999999
Q ss_pred hhHh
Q psy16425 153 KKKK 156 (163)
Q Consensus 153 ~~~~ 156 (163)
+|.+
T Consensus 172 ~d~G 175 (315)
T 1itb_B 172 KHRG 175 (315)
T ss_dssp GGCE
T ss_pred hhCc
Confidence 9876
No 170
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.63 E-value=3.2e-15 Score=103.17 Aligned_cols=138 Identities=14% Similarity=0.093 Sum_probs=88.6
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-C-----
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-P----- 76 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~----- 76 (163)
.++.|.|... .+.+.+.|||++ ..+..... . .+ ......+..|.|.+++.+|+|.|+|.+.+. .
T Consensus 22 ~~VtL~C~~~-~~~~~~~W~k~g-~~~~~~~~---~--~~---~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~~~s 91 (257)
T 1b6u_A 22 ETVILQCWSD-VRFQHFLLHREG-KFKDTLHL---I--GE---HHDGVSKANFSIGPMMQDLAGTYRCYGSVTHSPYQLS 91 (257)
T ss_dssp CCEEEEEEES-SCCSEEEEEEES-TTCEEEEE---E--CB---CCTTCEEEEEEECSCCTTTCEEEEEEEECSSCTTSCC
T ss_pred CCEEEEEecC-CCCcEEEEEECC-CCCCccee---e--ee---ccCCCceEEEEeecCCcccCEEEEEeEeccCCCcccc
Confidence 4688888876 457889999954 33321110 0 00 011123458999999999999999999643 1
Q ss_pred CceEeEEEEEEcC---CcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCce-----EEeceEEEE
Q psy16425 77 MKSQVGYLEVVVP---PDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQ-----EDFPFFKRT 148 (163)
Q Consensus 77 ~~~~~~~l~v~~~---p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~-----~~~~~l~i~ 148 (163)
..+..+.|.|... |.+...+. ..+.+|++++|.|.+.+. .+.+.|++++..+....... ..+..|.|.
T Consensus 92 ~~S~~~~L~V~~~~~~P~l~~~p~---~~V~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~ 167 (257)
T 1b6u_A 92 APSDPLDIVITGLYEKPSLSAQPG---PTVLAGESVTLSCSSRSS-YDMYHLSREGEAHERRFSAGPKVNGTFQADFPLG 167 (257)
T ss_dssp CCCCCEEEEEECSSCCCEEECSSC---TTCBTTCEEEEEEECSSC-CSEEEEEETTSSCEECCBCBCCSSSCCBEEEEEE
T ss_pred ccCCCEEEecccCCCCcceEccCC---CccCCCCEEEEEEeCCCC-CcEEEEEECCcccCcccccccccCCceeEEEEec
Confidence 2244556777643 34433332 246889999999999875 47899999998765432111 125679999
Q ss_pred cchhhhHh
Q psy16425 149 KKKKKKKK 156 (163)
Q Consensus 149 ~v~~~~~~ 156 (163)
+|+ |++
T Consensus 168 ~v~--D~G 173 (257)
T 1b6u_A 168 PAT--HGG 173 (257)
T ss_dssp ECC--SCE
T ss_pred ccc--cCE
Confidence 987 554
No 171
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.63 E-value=8.5e-15 Score=101.28 Aligned_cols=152 Identities=17% Similarity=0.229 Sum_probs=96.2
Q ss_pred ceeEEEeeeeccC------CCEEEEEEcC-CceE---Eee-eeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEE
Q psy16425 3 ARMLIEIGEMLMA------ESTVAWLRVD-TQTI---LTI-QTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQ 71 (163)
Q Consensus 3 ~~~~~~~~~~~~~------~~~i~W~k~~-~~~~---~~~-~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 71 (163)
..+.|.|...+.+ .+.|.||+.+ +... ... ........+|+.+... ...++|.|.+++.+|+|.|.|.
T Consensus 21 ~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~-~~~~~L~I~~v~~~DsG~Y~C~ 99 (264)
T 2gjj_A 21 EKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGS-GTDFTLTIGSVKAEDLAVYYCQ 99 (264)
T ss_dssp CCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEE-TTEEEEEESSCCGGGCEEEEEE
T ss_pred CcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecC-CCEEEEEECCCCHHHCEEEEEE
Confidence 4688889887776 6899999953 2211 110 0000012467766542 3467999999999999999999
Q ss_pred EEeCCC--ceEeEEEEEEcCC------------------cccccCCCCcEEEeCCCcEEEEeEeccCCC--CeEEEEECC
Q psy16425 72 VNTDPM--KSQVGYLEVVVPP------------------DILDYPTSTDMVIREGSNVTLKCAASGSPK--PNITWRREG 129 (163)
Q Consensus 72 ~~~~~~--~~~~~~l~v~~~p------------------~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~--p~v~W~~~~ 129 (163)
+.+... ....+.|.|..+| .+..... ....+.+|+++.|.|.+.+.|. +.+.|+++.
T Consensus 100 ~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~ 178 (264)
T 2gjj_A 100 QYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQS-GPEVVKTGASVKISCKASGYSFTGYFINWVKKN 178 (264)
T ss_dssp ECSSSSCEECCCEEEEEECC-------------------CCEEEEC-CCEEECTTCCEEEEEEEESSCGGGSEEEEEEEC
T ss_pred EecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCC-CCEEEcCCCcEEEEEEEeCCccCCeEEEEEEEC
Confidence 965422 2234567777653 1211111 2346889999999999998764 789999863
Q ss_pred --eE--EEe---------------cCCceE------EeceEEEEcchhhhHh
Q psy16425 130 --GE--LIA---------------QGNGQE------DFPFFKRTKKKKKKKK 156 (163)
Q Consensus 130 --~~--~~~---------------~~~~~~------~~~~l~i~~v~~~~~~ 156 (163)
.. +.. ..+... ....|+|.+++.+|.+
T Consensus 179 ~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG 230 (264)
T 2gjj_A 179 SGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSEDSA 230 (264)
T ss_dssp TTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCE
T ss_pred CCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcccCE
Confidence 21 111 111111 1357999999999875
No 172
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.62 E-value=1.3e-15 Score=109.98 Aligned_cols=141 Identities=14% Similarity=0.148 Sum_probs=98.5
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCC-CCCeEEEEEEEeCCCc--e
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRE-SDRGWYMCQVNTDPMK--S 79 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~-~d~G~Y~C~~~~~~~~--~ 79 (163)
..+.|.|...+.|.+.|.|++ ++..+.. ....++... .+ +|.|.++.. +|+|.|+|.+.+.... +
T Consensus 23 ~~v~l~C~~~g~p~~~v~W~k-~g~~~~~------~~~~~~~~~-~~----~L~i~~~~~~~D~G~Y~C~a~n~~g~~~s 90 (382)
T 1cs6_A 23 EKVTLTCRARANPPATYRWKM-NGTELKM------GPDSRYRLV-AG----DLVISNPVKAKDAGSYQCVATNARGTVVS 90 (382)
T ss_dssp CEEEECCEEEEESCCEEEEEE-TTEECCC------STTSSEEEE-TT----EEEEESCCHHHHCEEEEEEEEETTEEEEC
T ss_pred CcEEEEEEecCCCCCEEEEEE-CCEECCc------CCCccEEee-CC----eEEEecccccccCEEEEEEEEcCCcEEEe
Confidence 367889999889999999999 5554421 123455543 22 799999996 9999999999776322 2
Q ss_pred EeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEe-ccCCCCeEEEEECCeEEEec--CCceE--EeceEEEEcchhhh
Q psy16425 80 QVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAA-SGSPKPNITWRREGGELIAQ--GNGQE--DFPFFKRTKKKKKK 154 (163)
Q Consensus 80 ~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~p~v~W~~~~~~~~~~--~~~~~--~~~~l~i~~v~~~~ 154 (163)
..+.+.+...|.+..... ....+.+|+++.|.|.+ .+.|.+.+.|++++..+... .+... ..+.|.|.+++.+|
T Consensus 91 ~~~~l~v~~~~~~~~~~~-~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 169 (382)
T 1cs6_A 91 REASLRFGFLQEFSAEER-DPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVSQTTGNLYIAKTEASD 169 (382)
T ss_dssp CCEEEEEEEECCCCSSCC-CCEEEETTSCEEECCCCCSEESCCEEEEEESSTTCBCCCCSSEEECTTTCCEEESSCCGGG
T ss_pred cceEEEeeccccccccCC-CceEEecCCcEEEEeCCCCCCCCcEEEEEECCCccccccCceEEEecCceEEEEEeeCccc
Confidence 345677766555443322 35678899999999996 46788999999998764221 11111 33679999999888
Q ss_pred Hh
Q psy16425 155 KK 156 (163)
Q Consensus 155 ~~ 156 (163)
.+
T Consensus 170 ~G 171 (382)
T 1cs6_A 170 LG 171 (382)
T ss_dssp CE
T ss_pred Ce
Confidence 75
No 173
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.62 E-value=3.9e-15 Score=99.73 Aligned_cols=126 Identities=15% Similarity=0.187 Sum_probs=79.7
Q ss_pred ceeEEEeeeec--cCCCEEEEEEcCC-ceEEee----e----eeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEE
Q psy16425 3 ARMLIEIGEML--MAESTVAWLRVDT-QTILTI----Q----THVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQ 71 (163)
Q Consensus 3 ~~~~~~~~~~~--~~~~~i~W~k~~~-~~~~~~----~----~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 71 (163)
.++.|.|...+ .+.+.|.||+... ...... . .......+|+.+.. ..++++|.|.+++.+|+|.|.|.
T Consensus 15 ~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~ 93 (215)
T 3nl4_H 15 TPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISK-TSTTVDLKITSPTTEDTATYFCV 93 (215)
T ss_dssp CCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEE-CSSEEEEEESSCCGGGCEEEEEE
T ss_pred CcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEe-eCCEEEEEECCCCcccCEEEEEE
Confidence 46888888765 4468899998532 221111 0 00112356777776 45678899999999999999999
Q ss_pred EEeCCC-----ceEeEEEEEE----cCCcccccCCCCcEEEeCCCcEEEEeEeccCCC--CeEEEEECCeE
Q psy16425 72 VNTDPM-----KSQVGYLEVV----VPPDILDYPTSTDMVIREGSNVTLKCAASGSPK--PNITWRREGGE 131 (163)
Q Consensus 72 ~~~~~~-----~~~~~~l~v~----~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~--p~v~W~~~~~~ 131 (163)
+.+... ......|.|. .+|.+...+. ...+.+|+.+.|.|.+.+.|+ +.+.|++++..
T Consensus 94 ~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~--~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~ 162 (215)
T 3nl4_H 94 RKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAP--CCGDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLT 162 (215)
T ss_dssp EECSSSSCEEEECCCEEEEECSSCCBCCEEEEECC--CTTCCC--CEEEEEEEEEEBSSCCEEEEGGGTBC
T ss_pred EecCCCccceEEcCCEEEEEeCCCcCCCEEEEecC--CccccCCCcEEEEEEEeeeeCCCeEEEEeeCCEE
Confidence 976532 2334466665 3344432222 123457999999999988543 35789998864
No 174
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.62 E-value=9.5e-15 Score=95.86 Aligned_cols=118 Identities=13% Similarity=0.251 Sum_probs=78.8
Q ss_pred ceeEEEeeeec--cCCCEEEEEE--cCCceEEeee--eeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCC
Q psy16425 3 ARMLIEIGEML--MAESTVAWLR--VDTQTILTIQ--THVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDP 76 (163)
Q Consensus 3 ~~~~~~~~~~~--~~~~~i~W~k--~~~~~~~~~~--~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~ 76 (163)
..+.|.|...+ .+.+.|.|++ .+. .+.... ...+...+|+.+..++ +|.|.+++.+|+|.|.|.+.+..
T Consensus 15 ~sv~L~~~~~~~~~~~~~i~W~k~~~~~-~i~~~~~~~~~~~~~~R~~~~~ng----sL~I~~v~~~DsG~Y~c~~~n~~ 89 (182)
T 1hnf_A 15 QDINLDIPSFQMSDDIDDIKWEKTSDKK-KIAQFRKEKETFKEKDTYKLFKNG----TLKIKHLKTDDQDIYKVSIYDTK 89 (182)
T ss_dssp SCEEECCTTCCCCSSEEEEEEEEGGGCC-EEEEECGGGCEEESCTTEEECTTS----CEEECSCCGGGCEEEEEEEEETT
T ss_pred CCEEEeCCcccccCcCCEEEEEECCCCc-EEEEEeCccCCCCCCCeEEECCCC----CEEECCCChhhCEEEEEEEEeCC
Confidence 45778875433 5678999999 443 332111 1112345777777555 89999999999999999997653
Q ss_pred -Cce--EeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEE
Q psy16425 77 -MKS--QVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGEL 132 (163)
Q Consensus 77 -~~~--~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~ 132 (163)
... ..+.|.|..+... +.... .+..+.|.|.+.+.|.|.+.|++++..+
T Consensus 90 g~~~~~~~~~L~V~~~~~~------P~i~~-~~~~v~L~C~~~~~p~~~~~W~~~g~~l 141 (182)
T 1hnf_A 90 GKNVLEKIFDLKIQERVSK------PKISW-TCINTTLTCEVMNGTDPELNLYQDGKHL 141 (182)
T ss_dssp SCEEEEEEEEEEEECCCCC------CEEEE-ETTTTEEEEECSSCSSCEEEEEESSCEE
T ss_pred CceeEEEEEEEEEcCcCCC------CEEEE-ccCcEEEEeEccCCCCCEEEEEECCEEC
Confidence 322 3445666643211 11112 2447899999999999999999999887
No 175
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.62 E-value=1.3e-14 Score=98.17 Aligned_cols=150 Identities=17% Similarity=0.202 Sum_probs=91.7
Q ss_pred ceeEEEeeeeccCC----CEEEEEEcC-CceE---Eee---eeeEE--ecCCeEEEEeCC-CceEEEEEcccCCCCCeEE
Q psy16425 3 ARMLIEIGEMLMAE----STVAWLRVD-TQTI---LTI---QTHVI--TKNHRIGVTHSE-TKAWYLHIREVRESDRGWY 68 (163)
Q Consensus 3 ~~~~~~~~~~~~~~----~~i~W~k~~-~~~~---~~~---~~~~~--~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y 68 (163)
.++.|.|...+.+. +.|.||+.+ +... ... +.... ...+|+.+.... .++++|.|.+++.+|+|.|
T Consensus 16 ~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y 95 (228)
T 3bae_H 16 QTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITSVDTADTATY 95 (228)
T ss_dssp CCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECSCCGGGCEEE
T ss_pred CeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcCCCcccCEEE
Confidence 46889999887764 899999853 2211 111 00001 124678776543 3567999999999999999
Q ss_pred EEEEEeCCC----------ceEeEEEEEEc----CCcccccCCCCcEEEeCCCcEEEEeEeccC-CCC-eEEEEECCeEE
Q psy16425 69 MCQVNTDPM----------KSQVGYLEVVV----PPDILDYPTSTDMVIREGSNVTLKCAASGS-PKP-NITWRREGGEL 132 (163)
Q Consensus 69 ~C~~~~~~~----------~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p-~v~W~~~~~~~ 132 (163)
.|.+.+... ....+.|.|.. +|.+...++ ...+.+|+.+.|.|.+.+. |.| .+.|++++..+
T Consensus 96 ~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~--~~~~~~g~~~~l~C~~~g~~P~p~~v~W~~~~~~~ 173 (228)
T 3bae_H 96 YCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAP--VCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSS 173 (228)
T ss_dssp EEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC-------CCSEEEEEEEEEEEBSSCCEEEEGGGTCCT
T ss_pred EEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEecc--cccccCCCCEEEEEEEccEeCCCEEEEEeeCCccc
Confidence 999966431 11235677763 333333221 2235689999999999875 877 99999988642
Q ss_pred E--ec-----CCceEEeceEEEEcchhhh
Q psy16425 133 I--AQ-----GNGQEDFPFFKRTKKKKKK 154 (163)
Q Consensus 133 ~--~~-----~~~~~~~~~l~i~~v~~~~ 154 (163)
. .. .........|+|..+..++
T Consensus 174 ~~~~~~~~~~~~~~~~~s~L~i~~~~~d~ 202 (228)
T 3bae_H 174 GVHTFPAVLQSDLYTLSSSVTVTSSTWPS 202 (228)
T ss_dssp TEEEEEEEEETTEEEEEEEEEEETTTTTT
T ss_pred CceEcCceeCCCcEEEEEEEEEEhhhcCC
Confidence 1 00 0111123457777776643
No 176
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.62 E-value=7.8e-15 Score=102.27 Aligned_cols=128 Identities=12% Similarity=0.086 Sum_probs=92.1
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCceEeE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKSQVG 82 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~ 82 (163)
..+.|.|...+ .|.|++.+. .+.. ..... .+|.|.+++.+|+|.|+|.+.+ + ....+
T Consensus 28 ~~v~l~C~~~~----~i~W~~~~~-~~~~------------~~~~~----~~L~i~~~~~~d~G~Y~C~~~n-g-~~~~~ 84 (290)
T 2o26_X 28 DTLSLTCIDPD----FVRWTFKTY-FNEM------------VENKK----NEWIQEKAEATRTGTYTCSNSN-G-LTSSI 84 (290)
T ss_dssp SCEEEEEECTT----EEEEEEECS-SSCE------------EEECS----SEEEETTCCGGGCEEEEEEESS-S-CEEEE
T ss_pred CcEEEEECCCC----cEEEecCCc-ceee------------ecCCC----ceEEEeccCHHhCeEEEEEeeC-C-ccEEE
Confidence 36788888776 899999544 3210 00111 2899999999999999999977 3 36667
Q ss_pred EEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCC-CeEEEE-ECCeEEEecCCce-EEeceEEEEcchhhhHh
Q psy16425 83 YLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPK-PNITWR-REGGELIAQGNGQ-EDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 83 ~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~-p~v~W~-~~~~~~~~~~~~~-~~~~~l~i~~v~~~~~~ 156 (163)
.|.|..+|..... .....+.+|+.+.|.|.+.+ |. |.+.|+ +++..+....... ...+.|.|.+++.+|.+
T Consensus 85 ~l~V~~~~~~~~~--~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~~~~~~~~~~~L~i~~v~~~d~G 158 (290)
T 2o26_X 85 YVFVRDPAKLFLV--GLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPTDLTFVPNPKAGITIKNVKRAYHR 158 (290)
T ss_dssp EEEEECSSCCBCC--CCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCTTCEEEEETTTEEEEESCCGGGTT
T ss_pred EEEEeCCCccccc--ccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCCCCceeeCCCCCEEEecccHHHCC
Confidence 8888887766532 24677889999999999986 77 899995 5666553322222 23468999999999987
No 177
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.62 E-value=1.7e-14 Score=98.19 Aligned_cols=130 Identities=16% Similarity=0.283 Sum_probs=84.5
Q ss_pred ceeEEEeeeeccCCCEEEEEEcC-CceE---Eee-ee-eEE--ecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVD-TQTI---LTI-QT-HVI--TKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNT 74 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~-~~~~---~~~-~~-~~~--~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~ 74 (163)
.++.|.|... .+.+.|.||+.+ +... ... .. ... ...+|+.+.....++++|.|.+++.+|+|.|.|.+.+
T Consensus 15 ~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 93 (238)
T 1bec_A 15 GKVTLSCQQT-NNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELATPSQTSVYFCASGG 93 (238)
T ss_dssp CCEEEEEEES-SCCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCCGGGCEEEEEEEES
T ss_pred CcEEEEEEeC-CCCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCCcccCEEEEEEEec
Confidence 4678888874 568899999964 2211 111 10 001 1256777765445678999999999999999999966
Q ss_pred CCC------ceEeEEEEEEc------CCcccccCCCCcEEEeCCCcEEEEeEeccC-CCC-eEEEEECCeEEEe
Q psy16425 75 DPM------KSQVGYLEVVV------PPDILDYPTSTDMVIREGSNVTLKCAASGS-PKP-NITWRREGGELIA 134 (163)
Q Consensus 75 ~~~------~~~~~~l~v~~------~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p-~v~W~~~~~~~~~ 134 (163)
... ......|.|.. +|.+..... ....+.+|+.+.|.|.+.|. |.| .+.|++++..+..
T Consensus 94 ~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~-~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~~~~~ 166 (238)
T 1bec_A 94 GRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLFEP-SKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEVHS 166 (238)
T ss_dssp CTTCGGGCEECCCEEEEEESCGGGCBCCEEEEECC-CSTTCSSSCSCSEEEEEEEEBSCCEEEEEEETTEEECT
T ss_pred CCCCccccccCCCEEEEEeccCCCCCCCceEEECC-ChHHcccCCceEEEEEEeeEeCCCcEEEEEECCEECCC
Confidence 421 12334577765 333332211 11224579999999999985 755 8999999987643
No 178
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.61 E-value=2.2e-16 Score=106.96 Aligned_cols=151 Identities=15% Similarity=0.182 Sum_probs=78.4
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCC-ceEE--ee--eeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCC
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDT-QTIL--TI--QTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPM 77 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~-~~~~--~~--~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~ 77 (163)
.++.|.|...+.+.+.|.||+.+. .... .. ........+|+.... ..++++|.|.+++.+|+|.|.|.+.+...
T Consensus 39 ~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 117 (233)
T 3bqu_C 39 EKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSG-YGTDFVFTIENMLSEDVADYYCLQSDNLP 117 (233)
T ss_dssp --CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCE-EEEEEEEC-----CCCCSEEEEEECSSSS
T ss_pred CCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeec-cCCEEEEEECCCCHHHCEEEEEEEecCCc
Confidence 467888988888888899998542 2111 00 000001123333222 12345899999999999999999965422
Q ss_pred --ceEeEEEEEEc---CCcccccCCCCcEEEeCCCcEEEEeEeccC-CCC-eEEEEECCeEEEec----CCc-------e
Q psy16425 78 --KSQVGYLEVVV---PPDILDYPTSTDMVIREGSNVTLKCAASGS-PKP-NITWRREGGELIAQ----GNG-------Q 139 (163)
Q Consensus 78 --~~~~~~l~v~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p-~v~W~~~~~~~~~~----~~~-------~ 139 (163)
......|.|.. +|.+...+.. ....+|+++.|.|.+.+. |++ .+.|++++..+... ... .
T Consensus 118 ~~~~~~~~l~V~~~~~~p~v~~~~~~--~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~ 195 (233)
T 3bqu_C 118 YTFGGGTNLEIKRADAAPTVSIFPPS--SEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTY 195 (233)
T ss_dssp CCBCCCCBC---CCCBCCEEEEECCC--HHHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----CCEEEEECCCCTTTCCE
T ss_pred eeecCCEEEEEeCCCCCCEEEEeCCC--HHhhcCCceEEEEEEccccCCceEEEEEECCeeCCCCceEecCCccCCCCCE
Confidence 12223455543 3444332221 112368999999999885 444 79999999876433 000 0
Q ss_pred EEeceEEEEcchhhhHh
Q psy16425 140 EDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 140 ~~~~~l~i~~v~~~~~~ 156 (163)
.....|.|..+..+|++
T Consensus 196 ~~~s~L~i~~~~~~d~g 212 (233)
T 3bqu_C 196 SMSSTLTLTKDEYERHN 212 (233)
T ss_dssp EEEEEEEEEHHHHHTCC
T ss_pred EEEEEEEECHHHhCCCC
Confidence 12346788888777654
No 179
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.61 E-value=2.7e-15 Score=108.86 Aligned_cols=142 Identities=20% Similarity=0.358 Sum_probs=96.9
Q ss_pred ceeEEEeee-eccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCC-CeEEEEEEEeCCCc--
Q psy16425 3 ARMLIEIGE-MLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESD-RGWYMCQVNTDPMK-- 78 (163)
Q Consensus 3 ~~~~~~~~~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d-~G~Y~C~~~~~~~~-- 78 (163)
..+.|.|.. .+.|.+.+.|++.+...+ ....++.....+ +|.|.+++.+| +|.|+|.+.+....
T Consensus 132 ~~v~l~C~~~~~~p~~~v~W~~~~~~~~--------~~~~~~~~~~~~----~l~i~~v~~~d~~G~Y~C~a~n~~~~~~ 199 (404)
T 3p3y_A 132 APLTLQCNPPPGLPSPVIFWMSSSMEPI--------TQDKRVSQGHNG----DLYFSNVMLQDMQTDYSCNARFHFTHTI 199 (404)
T ss_dssp SCEEECCCCCCCSSCCEEEEECTTSCBC--------CCCSSEEECTTS----CEEESSCCSGGGSSCBEEEEECTTTCCE
T ss_pred CcEEEEeCCCCCCCCCeEEEeCCCcccc--------CCCCcEEEcCCC----cEEEEeeeeccCCcceEEEEEeccccce
Confidence 357788887 788999999999543332 223444444433 79999999999 59999999765322
Q ss_pred --eEeEEEEEEcC-------CcccccCC-CCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCce-EEeceEEE
Q psy16425 79 --SQVGYLEVVVP-------PDILDYPT-STDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQ-EDFPFFKR 147 (163)
Q Consensus 79 --~~~~~l~v~~~-------p~~~~~~~-~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~-~~~~~l~i 147 (163)
.....+.+... |.+..... .....+.+|+++.|.|.+.+.|.|.+.|++++..+....... ..++.|.|
T Consensus 200 ~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~L~i 279 (404)
T 3p3y_A 200 QQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRI 279 (404)
T ss_dssp EECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEECCBCCSSCCEEEEEETTBCCCTTTEEEEGGGTEEEE
T ss_pred eccCceeEEEeccCCccccCCccccccCCCCCceEecCCCEEEEEEECCCCCCcEEEEECCEECCCCcccccccCceEEE
Confidence 12234555432 22222111 124568899999999999999999999999998764432211 13578999
Q ss_pred EcchhhhHh
Q psy16425 148 TKKKKKKKK 156 (163)
Q Consensus 148 ~~v~~~~~~ 156 (163)
.+++.+|.+
T Consensus 280 ~~~~~~d~G 288 (404)
T 3p3y_A 280 TNVSEEDSG 288 (404)
T ss_dssp SSCCGGGCE
T ss_pred ccCCHhHCE
Confidence 999999875
No 180
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.61 E-value=4.1e-15 Score=109.17 Aligned_cols=151 Identities=17% Similarity=0.206 Sum_probs=96.4
Q ss_pred ceeEEEeeeeccCC----CEEEEEEcC-CceEE---eee-eeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEE
Q psy16425 3 ARMLIEIGEMLMAE----STVAWLRVD-TQTIL---TIQ-THVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVN 73 (163)
Q Consensus 3 ~~~~~~~~~~~~~~----~~i~W~k~~-~~~~~---~~~-~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~ 73 (163)
.++.|.|...+.+. +.|.||+.+ +..+. ... ........|+..... .+..+|.|.+++.+|+|.|+|.+.
T Consensus 17 ~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~a~ 95 (438)
T 1qgc_4 17 QRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGS-RTDFTLTIDPVEADDVATYYCQQS 95 (438)
T ss_dssp SCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEE-TTEEEEEESSCCGGGCEEEEEEEC
T ss_pred CCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEcc-CCcEEEEeCCCcCcCCeeEEEEEe
Confidence 46888999877776 489999953 22211 000 000112356665542 345689999999999999999997
Q ss_pred eCCC--ceEeEEEEEEc---CCcccccCCCCcEEEeCCCcEEEEeEecc-CCCC-eEEEEECCeEEEecC----------
Q psy16425 74 TDPM--KSQVGYLEVVV---PPDILDYPTSTDMVIREGSNVTLKCAASG-SPKP-NITWRREGGELIAQG---------- 136 (163)
Q Consensus 74 ~~~~--~~~~~~l~v~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p-~v~W~~~~~~~~~~~---------- 136 (163)
+... ....+.|.|.. +|.+...+. .....+|+.+.|.|.+.+ .|.| .+.|++++..+....
T Consensus 96 n~~~~~~~~~~~l~V~~~~~~P~v~~~~~--~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~ 173 (438)
T 1qgc_4 96 NEVPLTFGAGTKLDLKRADAAPTVSIFPP--SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSK 173 (438)
T ss_dssp SSTTCCBCCCEEEEECCCCBCCEEEEECC--CHHHHHTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEEECCCTT
T ss_pred cCCCccccCceeEEecCCCCCCEEEecCC--ChhhccCCceEEEEEEccccCCCcEEEEEECCEEcCCCceeccccccCC
Confidence 6532 23345666643 444433221 112235789999999987 7777 899999998764330
Q ss_pred -CceEEeceEEEEcchhhhHh
Q psy16425 137 -NGQEDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 137 -~~~~~~~~l~i~~v~~~~~~ 156 (163)
......+.|.|.++..+|++
T Consensus 174 ~~~~~~~~~L~i~~~~~~d~G 194 (438)
T 1qgc_4 174 DSTYSMSSTLTLTKDEYERHN 194 (438)
T ss_dssp TCCEEEEEEEEEEHHHHHTCC
T ss_pred CCcEEEEEEEEEeCcccCCCC
Confidence 00112457899999988865
No 181
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.60 E-value=2.5e-14 Score=100.27 Aligned_cols=152 Identities=13% Similarity=0.167 Sum_probs=93.9
Q ss_pred ceeEEEeeeeccC--CCEEEEEEcCC-ceE---Eeee------eeEEecCCeEEEEeCC-CceEEEEEcccCCCCCeEEE
Q psy16425 3 ARMLIEIGEMLMA--ESTVAWLRVDT-QTI---LTIQ------THVITKNHRIGVTHSE-TKAWYLHIREVRESDRGWYM 69 (163)
Q Consensus 3 ~~~~~~~~~~~~~--~~~i~W~k~~~-~~~---~~~~------~~~~~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~ 69 (163)
..+.|.|...+.+ .+.|.||+.+. ... .... .......+|+.+.... .++++|.|.+++.+|+|.|.
T Consensus 38 ~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~ 117 (291)
T 2gki_A 38 ASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYY 117 (291)
T ss_dssp CCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECSCCGGGCEEEE
T ss_pred CCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECcCCHHHCEEEE
Confidence 4678888877665 68899999532 111 1100 0001123566655432 24679999999999999999
Q ss_pred EEEEeCC--Cc----eEeEEEEEEcC----------------CcccccCCCCcEEEeCCCcEEEEeEeccCCCC------
Q psy16425 70 CQVNTDP--MK----SQVGYLEVVVP----------------PDILDYPTSTDMVIREGSNVTLKCAASGSPKP------ 121 (163)
Q Consensus 70 C~~~~~~--~~----~~~~~l~v~~~----------------p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p------ 121 (163)
|.+.+.. .. ...+.|.|..+ +.+... .....+.+|+++.|.|.+.+.|.+
T Consensus 118 C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~--p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~ 195 (291)
T 2gki_A 118 CARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQS--PSSLAVSAGEKVTMSCKSSQSLFNSRTRKN 195 (291)
T ss_dssp EEEECGGGTTCEEEECCCEEEEECC----------------CCCEECS--CSEEEEETTSCEEEEEEESSCCEETTTTEE
T ss_pred EEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcC--CCEEEEcCCCcEEEEEEcCCccccccccce
Confidence 9996642 11 12335666551 112221 235678899999999999988765
Q ss_pred eEEEEECC--eE--EEe----------cCCceE----EeceEEEEcchhhhHh
Q psy16425 122 NITWRREG--GE--LIA----------QGNGQE----DFPFFKRTKKKKKKKK 156 (163)
Q Consensus 122 ~v~W~~~~--~~--~~~----------~~~~~~----~~~~l~i~~v~~~~~~ 156 (163)
.+.|+++. .. ... ..+... ....|+|.+++.+|.+
T Consensus 196 ~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG 248 (291)
T 2gki_A 196 YLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLA 248 (291)
T ss_dssp CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred eEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHHHCE
Confidence 89999863 21 111 111111 1247999999999875
No 182
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.60 E-value=2.3e-14 Score=98.44 Aligned_cols=149 Identities=15% Similarity=0.258 Sum_probs=90.5
Q ss_pred ceeEEEeeeec--cCCCEEEEEEcCC-ceEEee---e------eeEEecCCeEEEEeCC-CceEEEEEcccCCCCCeEEE
Q psy16425 3 ARMLIEIGEML--MAESTVAWLRVDT-QTILTI---Q------THVITKNHRIGVTHSE-TKAWYLHIREVRESDRGWYM 69 (163)
Q Consensus 3 ~~~~~~~~~~~--~~~~~i~W~k~~~-~~~~~~---~------~~~~~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~ 69 (163)
.++.|.|...+ .+...|.||+... ...... . .......+|+.+..+. .++++|.|.+++.+|+|.|.
T Consensus 16 ~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~ 95 (253)
T 3liz_H 16 GSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSSLKSEDTAMYY 95 (253)
T ss_dssp CCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECSCCGGGCEEEE
T ss_pred CcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCCChhhCEEEE
Confidence 46888888765 4467899998542 111111 0 0001234677776544 36788999999999999999
Q ss_pred EEEEeCC-----CceEeEEEEEE----cCCcccccCCCCcEEEeCCCcEEEEeEecc-CCCC-eEEEEECCeEE------
Q psy16425 70 CQVNTDP-----MKSQVGYLEVV----VPPDILDYPTSTDMVIREGSNVTLKCAASG-SPKP-NITWRREGGEL------ 132 (163)
Q Consensus 70 C~~~~~~-----~~~~~~~l~v~----~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p-~v~W~~~~~~~------ 132 (163)
|.+.+.. .......|.|. .+|.+...+. ...+.+|+.+.|.|.+.+ .|.+ .+.|++++..+
T Consensus 96 C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~--~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~~~~~~~~~ 173 (253)
T 3liz_H 96 CTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPLAP--GSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFP 173 (253)
T ss_dssp EEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEECC--------CCEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECC
T ss_pred EEEecCCcceeeEECCCEEEEEeccCCCCCeEEEecC--CcccCCCCcEEEEEEEeeEeCCCeEEEEEeCCeecceEeCC
Confidence 9996542 12233466665 2344432221 234557999999999987 7767 89999998721
Q ss_pred --EecCCceEEeceEEEEcchhhh
Q psy16425 133 --IAQGNGQEDFPFFKRTKKKKKK 154 (163)
Q Consensus 133 --~~~~~~~~~~~~l~i~~v~~~~ 154 (163)
... ......+.|+|..+..+|
T Consensus 174 ~~~~~-g~~~~~s~L~i~~~~~~d 196 (253)
T 3liz_H 174 AVLQS-DLYTLSSSVTVPSSTWPS 196 (253)
T ss_dssp CEEET-TEEEEEEEEEEETTSTTT
T ss_pred ccccC-CeEEEEEEEEEcHHHCCC
Confidence 111 111233567888777665
No 183
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.60 E-value=1.2e-15 Score=106.31 Aligned_cols=139 Identities=14% Similarity=0.146 Sum_probs=94.1
Q ss_pred ceeEEEeeeeccCC--CEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCc--
Q psy16425 3 ARMLIEIGEMLMAE--STVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMK-- 78 (163)
Q Consensus 3 ~~~~~~~~~~~~~~--~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~-- 78 (163)
..+.|.|...+ |. +.|.|++.++..+ ....++.....+ .|.|.+++.+|+|.|+|.+.+....
T Consensus 105 ~~v~l~C~~~~-~~~~~~v~W~~~~~~~~--------~~~~~~~~~~~~----~L~i~~~~~~d~G~Y~C~a~n~~~~~~ 171 (292)
T 4dkd_C 105 QDALLPCLLTD-PVLEAGVSLVRVRGRPL--------MRHTNYSFSPWH----GFTIHRAKFIQSQDYQCSALMGGRKVM 171 (292)
T ss_dssp SCEECCEEESS-GGGGSSEEEEEGGGCCC--------CSSCCEECCSSS----CCEETTCCGGGCSEEEEEECSTTSCEE
T ss_pred CcEEEeeeCCC-CCcceeEEEEecCCCcc--------ccCCcccccCCc----eEEECCCCHHHCeEEEEEEEeCCCcee
Confidence 35677787765 44 7899999645443 122333333322 5999999999999999999765332
Q ss_pred eEeEEEEEEc----CCcccccCCCCcEEEeCCCcEEEEeEeccCCC-CeEEEEECCeEEEecCCc------eEEeceEEE
Q psy16425 79 SQVGYLEVVV----PPDILDYPTSTDMVIREGSNVTLKCAASGSPK-PNITWRREGGELIAQGNG------QEDFPFFKR 147 (163)
Q Consensus 79 ~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~-p~v~W~~~~~~~~~~~~~------~~~~~~l~i 147 (163)
+..+.|.|.. +|.+...+. ...+.+|+.+.|.|.+.+.|+ +.+.|++++..+...... ....+.|.|
T Consensus 172 s~~~~l~V~~~~~~~p~i~~~~~--~~~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~L~i 249 (292)
T 4dkd_C 172 SISIRLKVQKVIPGPPALTLVPA--ELVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNL 249 (292)
T ss_dssp CCCEEEEEECCCCSSCEEEEESS--CBCCCSSSCEEEEEEEEESSSCCEEECCBSSCCCCCCBEEEEETTEEEEEEEEEE
T ss_pred EEEEEEEEeCCCCCCCeEEccCC--ceeEecCCCEEEEEEecCCCCceEEEEeCCCcccccCccceeccceeeeEEEEEE
Confidence 3356777776 666655443 334568999999999998765 568898888755322111 124458999
Q ss_pred EcchhhhHh
Q psy16425 148 TKKKKKKKK 156 (163)
Q Consensus 148 ~~v~~~~~~ 156 (163)
.+++.+|.+
T Consensus 250 ~~v~~~d~G 258 (292)
T 4dkd_C 250 DQVDFQHAG 258 (292)
T ss_dssp SSCCTTSCE
T ss_pred CccChhcCe
Confidence 999988865
No 184
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.60 E-value=4.1e-14 Score=96.06 Aligned_cols=129 Identities=16% Similarity=0.277 Sum_probs=80.4
Q ss_pred ceeEEEeeeeccC--CCEEEEEEcC-Cce---EEeee---eeEE--ecCCeEEEEeCC-CceEEEEEcccCCCCCeEEEE
Q psy16425 3 ARMLIEIGEMLMA--ESTVAWLRVD-TQT---ILTIQ---THVI--TKNHRIGVTHSE-TKAWYLHIREVRESDRGWYMC 70 (163)
Q Consensus 3 ~~~~~~~~~~~~~--~~~i~W~k~~-~~~---~~~~~---~~~~--~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C 70 (163)
.++.|.|...+.+ .+.|.||+.. +.. +.... .... ...+|+.+..+. .++++|.|.+++.+|+|.|.|
T Consensus 16 ~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 95 (232)
T 1dn0_B 16 ETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC 95 (232)
T ss_dssp SCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCCGGGCEEEEE
T ss_pred CcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCCCcccCEEEEE
Confidence 4688889877654 6789999964 221 11110 0011 134688877643 457899999999999999999
Q ss_pred EEEe-CC--C----ceEeEEEEEEcC----CcccccCCCCcEEEeCC-CcEEEEeEeccC-CCC-eEEEEE-CCeEEE
Q psy16425 71 QVNT-DP--M----KSQVGYLEVVVP----PDILDYPTSTDMVIREG-SNVTLKCAASGS-PKP-NITWRR-EGGELI 133 (163)
Q Consensus 71 ~~~~-~~--~----~~~~~~l~v~~~----p~~~~~~~~~~~~~~~g-~~~~l~C~~~~~-p~p-~v~W~~-~~~~~~ 133 (163)
.+.+ .+ . ......|.|... |.+....+ ...+..| +.+.|.|.+.+. |.| .+.|++ ++..+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p--~~~~~~g~~~v~L~C~~~g~~P~p~~v~W~~~~g~~l~ 171 (232)
T 1dn0_B 96 ARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLVS--CENSPSDTSSVAVGCLAQDFLPDSITFSWKYKNNSDIS 171 (232)
T ss_dssp EECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEEEEC--C------CCSEEEEEEEEEEBSSCCEEEEEETTSCEEC
T ss_pred EEecCCcCCchhhhcccceEEEEccCCCCCCceEEecc--ccccCCCCCcEEEEEEEEEEeCCCeEEEEEcCCCCcee
Confidence 9963 11 1 123456777652 33322111 1223468 899999999875 876 999999 887753
No 185
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.60 E-value=2.4e-14 Score=97.71 Aligned_cols=127 Identities=17% Similarity=0.193 Sum_probs=83.3
Q ss_pred ceeEEEeeeecc--CCCEEEEEEcC-Cce---EEeee---eeEEe---cCCeEEEEeCC-CceEEEEEcccCCCCCeEEE
Q psy16425 3 ARMLIEIGEMLM--AESTVAWLRVD-TQT---ILTIQ---THVIT---KNHRIGVTHSE-TKAWYLHIREVRESDRGWYM 69 (163)
Q Consensus 3 ~~~~~~~~~~~~--~~~~i~W~k~~-~~~---~~~~~---~~~~~---~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~ 69 (163)
.++.|.|...+. +.+.|.||+.+ +.. +.... ..... ..+|+.+.... .++++|.|.+++.+|+|.|.
T Consensus 17 ~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 96 (242)
T 1hxm_B 17 KTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLTIHNVEKQDIATYY 96 (242)
T ss_dssp CCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEEEECSCCGGGCEEEE
T ss_pred CcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEEEECCCCcccCEEEE
Confidence 468888987765 67899999954 221 11111 00111 45788876543 36789999999999999999
Q ss_pred EEEEeCC--C------ceEeEEEEEEcC-------CcccccCCCCcEEEeCCCcEEEEeEeccC-CC-CeEEEEECCe
Q psy16425 70 CQVNTDP--M------KSQVGYLEVVVP-------PDILDYPTSTDMVIREGSNVTLKCAASGS-PK-PNITWRREGG 130 (163)
Q Consensus 70 C~~~~~~--~------~~~~~~l~v~~~-------p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-p~v~W~~~~~ 130 (163)
|.+.+.. . ......|.|... |....... ....+.+|+.+.|.|.+.+. |. +.+.|++++.
T Consensus 97 C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~p-~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~ 173 (242)
T 1hxm_B 97 CALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFLP-SIAETKLQKAGTYLCLLEKFFPDVIKIHWEEKKS 173 (242)
T ss_dssp EEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCCC-CGGGGGSSSCEEEEEEEEEESSCCEEEEEEESSS
T ss_pred EeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEECC-ChhhcccCCCceEEEEEeeEECCCeEEEEEcCCC
Confidence 9996542 1 123456777753 32222211 12235579999999999875 65 6899999987
No 186
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.60 E-value=7.2e-17 Score=125.86 Aligned_cols=153 Identities=17% Similarity=0.282 Sum_probs=0.0
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEe-cC---------CeEEEEeCCCceEEEEEcccCCCCCeEEEEEE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVIT-KN---------HRIGVTHSETKAWYLHIREVRESDRGWYMCQV 72 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~-~~---------~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~ 72 (163)
.++.|.|...+.|.+.|.|++.+............. .. ....+.........|.|.+++.+|+|.|+|.+
T Consensus 565 ~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a 644 (772)
T 3v2a_R 565 ESVSLWCTADRSTFENLTWYKLGPQPLPIHVGELPTPVCKNLDTLWKLNATMFSNSTNDILIMELKNASLQDQGDYVCLA 644 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CceEEEEeccCCCCCCcEEEEcCCcccccccCcccccccccccceeeccceeeecCCCceEEEEECCCCccCCcEEEEEE
Confidence 357788988899999999999443322111000000 00 00000111112346999999999999999999
Q ss_pred EeC-CCce--EeEEEEE--EcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCce--EEeceE
Q psy16425 73 NTD-PMKS--QVGYLEV--VVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQ--EDFPFF 145 (163)
Q Consensus 73 ~~~-~~~~--~~~~l~v--~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~--~~~~~l 145 (163)
.|. +... ....+.| ..+|.+...+ ....+.+|+++.|.|.+.|.|.|.+.|++++..+....... .+++.|
T Consensus 645 ~n~~~~~~~s~~~~l~v~~~~~P~~~~~~--~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~L 722 (772)
T 3v2a_R 645 QDRKTKKRHCVVRQLTVLERVAPTITGNL--ENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDGNRNL 722 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EeCCCCeEEEEEEeecccccCCCEeecCC--CceEEeCCCCEEEEEEeCccCCCeEEEEECCeECcCCCCeEEcCCCcEE
Confidence 774 2221 2334444 5567665543 34668889999999999999999999999999886654433 246789
Q ss_pred EEEcchhhhHhh
Q psy16425 146 KRTKKKKKKKKK 157 (163)
Q Consensus 146 ~i~~v~~~~~~~ 157 (163)
+|.+++.+|.+.
T Consensus 723 ~I~~v~~~D~G~ 734 (772)
T 3v2a_R 723 TIRRVRKEDEGL 734 (772)
T ss_dssp ------------
T ss_pred EECcCCHHHCEE
Confidence 999999999874
No 187
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.60 E-value=1.6e-14 Score=99.19 Aligned_cols=128 Identities=18% Similarity=0.300 Sum_probs=80.4
Q ss_pred ceeEEEeeeeccCCCEEEEEEcC-CceE---Eeeee----eEEecCC-eEEEEeCCCceEEEEEcccCCCCCeEEEEEEE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVD-TQTI---LTIQT----HVITKNH-RIGVTHSETKAWYLHIREVRESDRGWYMCQVN 73 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~-~~~~---~~~~~----~~~~~~~-r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~ 73 (163)
.++.|.|...+.+.+.|.||+.. +... ..... ......+ |+.+....... |.|.+++.+|+|.|.|.+.
T Consensus 17 ~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~--L~I~~v~~~DsG~Y~C~~~ 94 (253)
T 3to4_D 17 QAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTE--LRLQVANMSQGRTLYCTSS 94 (253)
T ss_dssp CCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSC--CEEEEESCSSCEEEEEEEE
T ss_pred CcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCe--EEEccCChhhCeEEEEEEe
Confidence 46889998888888999999842 1111 11100 0111223 77776655333 9999999999999999996
Q ss_pred eCCC-------ceEeEEEEEEc------CCcccccCCCCcEEEeCCCcEEEEeEecc-CCCC-eEEEEECCeEEE
Q psy16425 74 TDPM-------KSQVGYLEVVV------PPDILDYPTSTDMVIREGSNVTLKCAASG-SPKP-NITWRREGGELI 133 (163)
Q Consensus 74 ~~~~-------~~~~~~l~v~~------~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p-~v~W~~~~~~~~ 133 (163)
+... ......|.|.. +|.+...+. ....+.+|+.+.|.|.+.+ .|++ .++|++++..+.
T Consensus 95 ~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~~-~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~l~ 168 (253)
T 3to4_D 95 ADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEP-SEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVH 168 (253)
T ss_dssp CSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEEC-CHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEEC
T ss_pred cCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeCC-ChhhcccCCceEEEEEEceEECCcEEEEEEECCEECC
Confidence 4421 12233566653 222221111 0111224689999999998 6777 899999998874
No 188
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.59 E-value=8.9e-15 Score=100.94 Aligned_cols=127 Identities=15% Similarity=0.319 Sum_probs=76.9
Q ss_pred ceeEEEeeeeccC--CCEEEEEEcC-CceEE---ee----eeeE--EecCCeEEEEeCC-CceEEEEEcccCCCCCeEEE
Q psy16425 3 ARMLIEIGEMLMA--ESTVAWLRVD-TQTIL---TI----QTHV--ITKNHRIGVTHSE-TKAWYLHIREVRESDRGWYM 69 (163)
Q Consensus 3 ~~~~~~~~~~~~~--~~~i~W~k~~-~~~~~---~~----~~~~--~~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~ 69 (163)
.++.|.|...+.+ .+.|.||+.+ +.... .. +... ....+|+.+..+. .++++|.|.+++.+|+|.|.
T Consensus 16 ~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~ 95 (257)
T 3bn9_D 16 GSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSSLRAEDTAVYY 95 (257)
T ss_dssp CEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEESCCGGGCEEEE
T ss_pred CcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECCCChhhCEEEE
Confidence 4688999887654 6889999964 22211 11 0011 1235788877643 45789999999999999999
Q ss_pred EEEEeCCC--------------ceEeEEEEEEc----CCcccccCCCCcEEEeCCCcEEEEeEeccC-CCC-eEEEEECC
Q psy16425 70 CQVNTDPM--------------KSQVGYLEVVV----PPDILDYPTSTDMVIREGSNVTLKCAASGS-PKP-NITWRREG 129 (163)
Q Consensus 70 C~~~~~~~--------------~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p-~v~W~~~~ 129 (163)
|.+.+... ......|.|.. +|.+....+ ...+.+|+.+.|.|.+.+. |.| .+.|++++
T Consensus 96 C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~~~P~v~~~~p--~~~~~~g~~v~L~C~~~g~~P~pi~v~W~k~g 173 (257)
T 3bn9_D 96 CARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSASTKGPSVFPLAP--SSKSTSGGTAALGCLVKDYFPEPVTVSWNSGA 173 (257)
T ss_dssp EEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSCCBCCEECCCCC-------------CCCEEEEEBSSCCEEEETTTT
T ss_pred EEEecCCCcccccccccceeeeeCCcEEEEecCCCCcCCcEEEecC--cccccCCCcEEEEEEEeeEECCCcEEEEeeCC
Confidence 99965421 11234677764 344333221 2235679999999999875 877 89999998
Q ss_pred eE
Q psy16425 130 GE 131 (163)
Q Consensus 130 ~~ 131 (163)
..
T Consensus 174 ~~ 175 (257)
T 3bn9_D 174 LT 175 (257)
T ss_dssp CC
T ss_pred Cc
Confidence 75
No 189
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.59 E-value=3.7e-14 Score=98.02 Aligned_cols=150 Identities=16% Similarity=0.174 Sum_probs=93.0
Q ss_pred ceeEEEeeeeccC--CCEEEEEEcC-CceEEe---ee----eeE--EecCCeEEEEeCC-CceEEEEEcccCCCCCeEEE
Q psy16425 3 ARMLIEIGEMLMA--ESTVAWLRVD-TQTILT---IQ----THV--ITKNHRIGVTHSE-TKAWYLHIREVRESDRGWYM 69 (163)
Q Consensus 3 ~~~~~~~~~~~~~--~~~i~W~k~~-~~~~~~---~~----~~~--~~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~ 69 (163)
.++.|.|...+.+ .+.|.||+.+ +..+.. .. ... ....+|+.+..+. .++++|.|.+++.+|+|.|.
T Consensus 22 ~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~ 101 (261)
T 2xqy_G 22 ASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSSLTSEDSAVYY 101 (261)
T ss_dssp CCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEE
T ss_pred CCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcCCCcccCeEEE
Confidence 4688899887665 6899999964 222211 00 000 1235677776542 35679999999999999999
Q ss_pred EEEEeCCC----ceEeEEEEEEc----CCcccccCCCCcEEEeCCCcEEEEeEecc-CCCC-eEEEEECCeEEEe--cCC
Q psy16425 70 CQVNTDPM----KSQVGYLEVVV----PPDILDYPTSTDMVIREGSNVTLKCAASG-SPKP-NITWRREGGELIA--QGN 137 (163)
Q Consensus 70 C~~~~~~~----~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p-~v~W~~~~~~~~~--~~~ 137 (163)
|.+.+... ....+.|.|.. +|.+...+. ...+.+|+.+.|.|.+.+ .|.| .+.|++++..+.. ...
T Consensus 102 C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p--~~~v~~g~~v~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~ 179 (261)
T 2xqy_G 102 CGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLAP--VCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPA 179 (261)
T ss_dssp EEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECC--CCC--CCSEEEEEEEEEEEBSSCCEEEEGGGTCCTTEEECCC
T ss_pred EEEecCCCcceEECCCEEEEEccCCCCCCeEEEeCC--CccccCCCcEEEEEEEEeEeCCCCEEEEecCCCcCceEecCc
Confidence 99976421 12334677764 344333222 122567999999999987 4776 8999998865311 110
Q ss_pred ----ce-EEeceEEEEcchhhh
Q psy16425 138 ----GQ-EDFPFFKRTKKKKKK 154 (163)
Q Consensus 138 ----~~-~~~~~l~i~~v~~~~ 154 (163)
.. .....|+|..+..+|
T Consensus 180 ~~~~g~~~~~s~L~i~~~~~~~ 201 (261)
T 2xqy_G 180 VLQSDLYTLSSSVTVTSSTWPS 201 (261)
T ss_dssp EEETTEEEEEEEEEEETTTTTT
T ss_pred eecCCcEEEEEEEEEeccccCC
Confidence 11 133567887777654
No 190
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.59 E-value=1.8e-15 Score=102.44 Aligned_cols=151 Identities=18% Similarity=0.242 Sum_probs=89.7
Q ss_pred ceeEEEeeeeccCC-C-EEEEEEcC-CceEE--ee-e-eeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC
Q psy16425 3 ARMLIEIGEMLMAE-S-TVAWLRVD-TQTIL--TI-Q-THVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD 75 (163)
Q Consensus 3 ~~~~~~~~~~~~~~-~-~i~W~k~~-~~~~~--~~-~-~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 75 (163)
.++.|.|...+.+. + .|.||+.+ +.... .. . ........|+.... ..++++|.|.+++.+|+|.|.|.+.+.
T Consensus 35 ~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 113 (234)
T 2j6e_L 35 QRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSK-SGTSASLAISGLRSEDEADYYCATWDD 113 (234)
T ss_dssp CEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEE-ETTEEEEEEESCCSTTCSEEEEEEEET
T ss_pred CcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEe-cCCeEEEEECCCCHHHCEEEEEEEEcC
Confidence 46889998776443 3 69999953 22211 00 0 00011235666554 235678999999999999999999766
Q ss_pred CCc----eEeEEEEEE----cCCcccccCCCCcEEEeCCCcEEEEeEeccC-CC-CeEEEEECCeEEEecCC---ce---
Q psy16425 76 PMK----SQVGYLEVV----VPPDILDYPTSTDMVIREGSNVTLKCAASGS-PK-PNITWRREGGELIAQGN---GQ--- 139 (163)
Q Consensus 76 ~~~----~~~~~l~v~----~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-p~v~W~~~~~~~~~~~~---~~--- 139 (163)
... .....|.|. .+|.+...+. .....+|+++.|.|.+.+. |+ +.+.|++++..+..... ..
T Consensus 114 ~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~--~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~ 191 (234)
T 2j6e_L 114 SLSAVIFGGGTKLTVLGQPKAAPSVTLFPP--SSEELQANKATLVCLISDFFPGAVTVAWKADGAPVKAGVETTKPSKQS 191 (234)
T ss_dssp TTTEEEECCCBCCCBCCCCCCCCCCCEECC--CHHHHTTSCCCEEECCCBCSSCCCEEEEEETTEECCSSEEECCCCCCT
T ss_pred CcceeEecCCEEEEEecCCCCCCcccccCC--ChhHhcCCceEEEEEEEEEcCCceEEEEEECCEECCCCccccCceECC
Confidence 431 122344443 2333332221 1123358899999999885 44 38999999987643210 00
Q ss_pred ----EEeceEEEEcchhhhHh
Q psy16425 140 ----EDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 140 ----~~~~~l~i~~v~~~~~~ 156 (163)
.....|.|..+..+|.+
T Consensus 192 ~~~~~~~s~L~i~~~~~~d~G 212 (234)
T 2j6e_L 192 NNKYAASSYLSLTPEQWKSHR 212 (234)
T ss_dssp TSCCBCCEEECCCGGGTTTSC
T ss_pred CCCEEEEEEEEECHHHcCCCC
Confidence 11235777777776654
No 191
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.59 E-value=1.3e-14 Score=97.64 Aligned_cols=122 Identities=19% Similarity=0.283 Sum_probs=76.7
Q ss_pred ceeEEEeeeecc---C-CCEEEEEEcCCceEEeeeee--EEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCC
Q psy16425 3 ARMLIEIGEMLM---A-ESTVAWLRVDTQTILTIQTH--VITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDP 76 (163)
Q Consensus 3 ~~~~~~~~~~~~---~-~~~i~W~k~~~~~~~~~~~~--~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~ 76 (163)
.++.|.|...+. | .+.|.|++. +..+...... .....+++.. ..+|.|.+++.+|+|.|+|.+.+..
T Consensus 27 ~~v~L~C~~~g~~~~p~~~~v~W~k~-~~~~~~~~~~~~~~~~~~~~~~------~~~L~I~~~~~~D~g~Y~C~~~~~~ 99 (218)
T 2rgs_A 27 LTPKVTCVVVDVSEDDPDVQISWFVN-NVEVHTAQTQTHREDYNSTIRV------VSTLPIQHQDWMSGKEFKCKVNNKD 99 (218)
T ss_dssp SCCEEEEEEEEECTTSCCEEEEEEET-TEEECCCEEEEEEETTTTEEEE------EEEEECCHHHHHTTCCEEEEEEETT
T ss_pred CCeeEEEEEcCCccCCCceEEEEEEC-CccccCcccccccccCCCeEEE------EEEEEEcHHHcCCCCeEEEEEECCc
Confidence 467888888776 3 379999994 4443211110 0111223322 2379999999999999999997763
Q ss_pred Cce-EeEEE----EEEcCCcccccCCCCcEEEeCCCcEEEEeEecc-CCCC-eEEEEECCeEEE
Q psy16425 77 MKS-QVGYL----EVVVPPDILDYPTSTDMVIREGSNVTLKCAASG-SPKP-NITWRREGGELI 133 (163)
Q Consensus 77 ~~~-~~~~l----~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p-~v~W~~~~~~~~ 133 (163)
... ....+ .+..+|.+...+.... ..+|+.+.|.|.+.| +|.+ .+.|++++..+.
T Consensus 100 ~~~~~~~~v~~~~~~~~~P~v~~~~~~~~--~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~ 161 (218)
T 2rgs_A 100 LPSPIERTISKIKGLVRAPQVYILPPPAE--QLSRKDVSLTCLVVGFNPGDISVEWTSNGHTEE 161 (218)
T ss_dssp CSSCEEEEECCCCCCCBCCEEEEECCCGG--GTTSSEEEEEEEEEEEBSSCCEEEEEETTEEEC
T ss_pred CCCcceEEEeecCCCCCCCEEEEECCChH--HhcCCceEEEEEEEeeeCCCcEEEEEECCEecc
Confidence 322 22222 2334555543332211 235899999999998 6766 899999998763
No 192
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.59 E-value=2.2e-14 Score=99.29 Aligned_cols=153 Identities=18% Similarity=0.243 Sum_probs=91.8
Q ss_pred ceeEEEeeeeccC-----CCEEEEEEcC-Cce---EEee-eeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEE
Q psy16425 3 ARMLIEIGEMLMA-----ESTVAWLRVD-TQT---ILTI-QTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQV 72 (163)
Q Consensus 3 ~~~~~~~~~~~~~-----~~~i~W~k~~-~~~---~~~~-~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~ 72 (163)
..+.|.|...+.+ .+.|.||+.+ +.. +... ........+|+..... .+.++|.|.+++.+|+|.|.|.+
T Consensus 31 ~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v~~~DsG~Y~C~~ 109 (268)
T 1x9q_A 31 DQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGS-GTDFTLKINRVEAEDLGVYFCSQ 109 (268)
T ss_dssp CCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEE-TTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcC-CCEEEEEECCCChhHCEEEEEEE
Confidence 4688899887776 5899999854 221 1110 0000012467766542 35678999999999999999999
Q ss_pred EeCCC--ceEeEEEEEEcCCccc---------------------ccCCCCcEEEeCCCcEEEEeEeccCCC--CeEEEEE
Q psy16425 73 NTDPM--KSQVGYLEVVVPPDIL---------------------DYPTSTDMVIREGSNVTLKCAASGSPK--PNITWRR 127 (163)
Q Consensus 73 ~~~~~--~~~~~~l~v~~~p~~~---------------------~~~~~~~~~~~~g~~~~l~C~~~~~p~--p~v~W~~ 127 (163)
.+... ......|.|...+... .........+.+|+++.|.|.+.+.|+ +.+.|++
T Consensus 110 ~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k 189 (268)
T 1x9q_A 110 STHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPGGAMKLSCVTSGFTFGHYWMNWVR 189 (268)
T ss_dssp CSSSSCEECCCEEEC------------------------CGGGCEEEEECCEEECTTCCEEEEEEEESSCGGGCEEEEEE
T ss_pred ecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEECCCceEecCCCcEEEEEEecCccccccEEEEEE
Confidence 65422 2233456665432100 000112457889999999999998764 7899998
Q ss_pred C--CeEE--Ee-----------------cCCceEE------eceEEEEcchhhhHh
Q psy16425 128 E--GGEL--IA-----------------QGNGQED------FPFFKRTKKKKKKKK 156 (163)
Q Consensus 128 ~--~~~~--~~-----------------~~~~~~~------~~~l~i~~v~~~~~~ 156 (163)
+ +..+ .. ..+.... ...|+|.+++.+|++
T Consensus 190 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG 245 (268)
T 1x9q_A 190 QSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRVEDTG 245 (268)
T ss_dssp EETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCE
T ss_pred eCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCCHHHCE
Confidence 5 2222 10 1111111 247999999999975
No 193
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.59 E-value=1.3e-14 Score=96.86 Aligned_cols=153 Identities=18% Similarity=0.298 Sum_probs=94.1
Q ss_pred cceeEEEeeeeccCCC---EEEEEEcCCceEEeeee---eE----EecCCeEEEEeC------CCceEEEEEcccCCCCC
Q psy16425 2 AARMLIEIGEMLMAES---TVAWLRVDTQTILTIQT---HV----ITKNHRIGVTHS------ETKAWYLHIREVRESDR 65 (163)
Q Consensus 2 ~~~~~~~~~~~~~~~~---~i~W~k~~~~~~~~~~~---~~----~~~~~r~~~~~~------~~~~~~L~i~~v~~~d~ 65 (163)
+..+.|.|...+.+.+ .|.|+|.++..+..... .. .....|...... ..++++|.|.+++.+|+
T Consensus 16 G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v~~~D~ 95 (225)
T 4fmk_A 16 GGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFRGLRVEDE 95 (225)
T ss_dssp TSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEECSCCGGGC
T ss_pred CCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEccCCHHHC
Confidence 4578899988776665 48999965544332110 00 011223333221 12456899999999999
Q ss_pred eEEEEEEEeCCCce--EeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEec-cCCCCeEEEEECCeEEEecCCce---
Q psy16425 66 GWYMCQVNTDPMKS--QVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAAS-GSPKPNITWRREGGELIAQGNGQ--- 139 (163)
Q Consensus 66 G~Y~C~~~~~~~~~--~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~-~~p~p~v~W~~~~~~~~~~~~~~--- 139 (163)
|.|.|.+.+..... ....+.+..+|.....+. ......++.+.+.|.+. +.|++.+.|++++..+.......
T Consensus 96 G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~~~~~~~~~~~~ 173 (225)
T 4fmk_A 96 GNYTCEFATFPNGTRRGVTWLRVIAQPENHAEAQ--EVTIGPQSVAVARCVSTGGRPPARITWISSLGGEAKDTQEPGIQ 173 (225)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEEC--CBCCSSSCEEEEEEEEEEEBSCCEEEEECSSCCEEEEEEEECSS
T ss_pred cceEEEEEeCCCcceeeeeeeeeecCCceeeccc--ceeecceeeeeeeeeecCCCCCCEEEEEECCccccCCcceEEec
Confidence 99999997653332 233455555555444332 23345677777777664 68889999999876654322111
Q ss_pred ----EEeceEEEEcchhhhHh
Q psy16425 140 ----EDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 140 ----~~~~~l~i~~v~~~~~~ 156 (163)
...+.|.|.++..+|++
T Consensus 174 ~~~~~~~s~L~i~~~~~~d~g 194 (225)
T 4fmk_A 174 AGTVTIISRYSLVPVGRADGV 194 (225)
T ss_dssp TTCEEEEEEEEECCCGGGTTC
T ss_pred CCCEEEEEEEEEeeCCHHHCC
Confidence 12346999999998875
No 194
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.59 E-value=3.7e-14 Score=104.05 Aligned_cols=145 Identities=13% Similarity=0.118 Sum_probs=90.7
Q ss_pred ceeEEEeeeec-cCCC-EEEEEEcCCceEEeeee---eE-EecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCC
Q psy16425 3 ARMLIEIGEML-MAES-TVAWLRVDTQTILTIQT---HV-ITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDP 76 (163)
Q Consensus 3 ~~~~~~~~~~~-~~~~-~i~W~k~~~~~~~~~~~---~~-~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~ 76 (163)
..+.|.|...+ .|.+ .|.|++ ++..+..... .. ...++.+.. ...|.|.+++.+|+|.|+|.+.+..
T Consensus 132 ~~~~l~C~~~g~~p~~~~v~W~k-~g~~~~~~~~~~~~~~~~~~~~~~~------~~~L~i~~~~~~d~G~Y~C~a~n~~ 204 (438)
T 1qgc_4 132 GGASVVCFLNNFYPKDINVKWKI-DGSERQNGVLNSWTDQDSKDSTYSM------SSTLTLTKDEYERHNSYTCEATHKT 204 (438)
T ss_dssp TEEEEEEEEEEEBSSCEEEEEEE-TTEEECTTEEEEEECCCTTTCCEEE------EEEEEEEHHHHHTCCEEEEEEEETT
T ss_pred CceEEEEEEccccCCCcEEEEEE-CCEEcCCCceeccccccCCCCcEEE------EEEEEEeCcccCCCCeEEEEEEecc
Confidence 36788888766 5666 899999 6655422100 00 011222222 2379999999999999999997763
Q ss_pred CceEeEEEEEEcC--CcccccCCCCcEEEeCCCcEEEEeEeccCC--CCeEEEEEC--CeEEEe----------------
Q psy16425 77 MKSQVGYLEVVVP--PDILDYPTSTDMVIREGSNVTLKCAASGSP--KPNITWRRE--GGELIA---------------- 134 (163)
Q Consensus 77 ~~~~~~~l~v~~~--p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p--~p~v~W~~~--~~~~~~---------------- 134 (163)
... ...+.+... +.....+ ....+.+|+++.|.|.+.|.| .+.+.|+++ +..+..
T Consensus 205 ~~~-~~~~~~~~~~~~~~~~~~--~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~ 281 (438)
T 1qgc_4 205 STS-PIVKSFNRNECEVMLVES--GGGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDS 281 (438)
T ss_dssp CSS-CEEEEEETTC-CCEEEEE--CCEEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGG
T ss_pred cCC-ceecccccccceeEEecC--CceEEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcc
Confidence 322 233333321 1112112 356788999999999999988 678999986 544321
Q ss_pred -cCCceEE------eceEEEEcchhhhHhh
Q psy16425 135 -QGNGQED------FPFFKRTKKKKKKKKK 157 (163)
Q Consensus 135 -~~~~~~~------~~~l~i~~v~~~~~~~ 157 (163)
..+.... ...|.|.+++.+|.+.
T Consensus 282 ~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~ 311 (438)
T 1qgc_4 282 VKGRFTISRDNAKNTLYLQMSSLRSADTAM 311 (438)
T ss_dssp GTTTEEEEEETTTTEEEEEECSCCGGGCCE
T ss_pred cCCcEEEEeecCCCeEEEEECCCChhhCEE
Confidence 1111111 2379999999998753
No 195
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.58 E-value=9.2e-15 Score=103.25 Aligned_cols=138 Identities=16% Similarity=0.125 Sum_probs=83.8
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCc----
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMK---- 78 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~---- 78 (163)
..+.|.|... .+.+.+.|++. +..+..... ............|.|.+++.+|+|.|+|.+.+....
T Consensus 134 ~~v~L~C~~~-~~~~~~~w~k~-g~~~~~~~~--------~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s 203 (316)
T 3vh8_G 134 ERVILQCWSD-IMFEHFFLHKE-GISKDPSRL--------VGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLS 203 (316)
T ss_dssp CCEEEEEEES-SCCSEEEEEET-TCCSCCEEE--------ECEEETTEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCC
T ss_pred CeEEEEEcCC-CCCcEEEEEEC-CCcccccee--------eeeecCCCceEEEEECCCChhhCceEEEEEecCCCCcccc
Confidence 3577888774 56678999994 443311100 000111112348999999999999999999765321
Q ss_pred --eEeEEEEEEc---CCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCc-----eEEeceEEEE
Q psy16425 79 --SQVGYLEVVV---PPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNG-----QEDFPFFKRT 148 (163)
Q Consensus 79 --~~~~~l~v~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~-----~~~~~~l~i~ 148 (163)
+....|.|.. +|.+...+ ...+.+|+++.|.|.+. .|.+.+.|++++..+...... ......|.|.
T Consensus 204 ~~s~~~~l~V~~~~~~p~i~~~~---~~~v~~G~~v~L~C~~~-~~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~ 279 (316)
T 3vh8_G 204 APSDPLDIVVTGPYEKPSLSAQP---GPKVQAGESVTLSCSSR-SSYDMYHLSREGGAHERRLPAVRKVNRTFQADFPLG 279 (316)
T ss_dssp CCCCCEEEEEECSSCCCEEEEES---CSCCCTTSCCEEEEEES-SCCSEEEEEETTSSCCEEEECEECTTSCEEEEEECC
T ss_pred CCCCCEEEEecCCCCCCeEEeCC---CCeecCCCcEEEEEECC-CCCcEEEEEECCCcCCCceeceeccCCceeEEEEcC
Confidence 4445666654 33333322 22467899999999997 478899999998765432111 1133678888
Q ss_pred cchhhhHh
Q psy16425 149 KKKKKKKK 156 (163)
Q Consensus 149 ~v~~~~~~ 156 (163)
+|+ |++
T Consensus 280 ~v~--D~G 285 (316)
T 3vh8_G 280 PAT--HGG 285 (316)
T ss_dssp -------C
T ss_pred CcC--CCE
Confidence 888 654
No 196
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.58 E-value=1.6e-14 Score=108.94 Aligned_cols=136 Identities=11% Similarity=0.099 Sum_probs=88.9
Q ss_pred eeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCceE--e
Q psy16425 4 RMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKSQ--V 81 (163)
Q Consensus 4 ~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~--~ 81 (163)
.+.|.|.+.+.|.|.|.|++.+ ...... . .............+...|+|.|+|.+.|...... .
T Consensus 156 ~~~L~C~a~G~P~P~i~W~~~~-~~~~~~-----------~--~~~~~~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~~~~ 221 (527)
T 3qs9_E 156 QDALVCISESVPEPIVEWVLCD-SQGESC-----------K--EESPAVVKKEEKVLHELFGTDIRCCARNELGRECTRL 221 (527)
T ss_dssp SSCEEEEEEESSCCEEEEEEC---------------------------CEEECCSEECCCCSSCEEEEEECSSCEEEEEC
T ss_pred ceEEEEEEceecCCeEEEEECC-CCCccc-----------c--ccCCcEEEEeeeeccccCCEEEEEEEEeCCCcccceE
Confidence 4568899999999999999943 322100 0 0000011223344568999999999987643322 2
Q ss_pred EEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEec-cCCCCeEEEEECCeEEEecC----------CceEEeceEEEEcc
Q psy16425 82 GYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAAS-GSPKPNITWRREGGELIAQG----------NGQEDFPFFKRTKK 150 (163)
Q Consensus 82 ~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~-~~p~p~v~W~~~~~~~~~~~----------~~~~~~~~l~i~~v 150 (163)
+.|.|...|.. +. ....+.+|+.+.|.|.+. +.|.|.+.|++++..+.... ........|.|.+|
T Consensus 222 ~~l~V~~~p~~---~p-~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v 297 (527)
T 3qs9_E 222 FTIDLNQTPQT---TL-PQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSV 297 (527)
T ss_dssp EEEESSSCCCC---SC-CEEEECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGGGEEEEEEEETTTEEEEEEEEEESSC
T ss_pred EEEEEeccCcc---CC-CceEEeCCCeEEEEEEEccCCCCeEEEEEECCEECCCCceeeeeeeccCcceeeEEEEEEccC
Confidence 45566555654 22 367788999999999996 89999999999998653321 11223456999999
Q ss_pred hhhhHhh
Q psy16425 151 KKKKKKK 157 (163)
Q Consensus 151 ~~~~~~~ 157 (163)
+.+|++.
T Consensus 298 ~~~DsG~ 304 (527)
T 3qs9_E 298 ARNDTGY 304 (527)
T ss_dssp CGGGCEE
T ss_pred CcccCeE
Confidence 9999763
No 197
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.58 E-value=3.9e-14 Score=99.86 Aligned_cols=153 Identities=16% Similarity=0.230 Sum_probs=97.4
Q ss_pred cceeEEEeeeeccCCC-----EEEEEEcCCceE--Ee--eeeeEEecCCeEEEEeCC----CceEEEEEcccCCCCCeEE
Q psy16425 2 AARMLIEIGEMLMAES-----TVAWLRVDTQTI--LT--IQTHVITKNHRIGVTHSE----TKAWYLHIREVRESDRGWY 68 (163)
Q Consensus 2 ~~~~~~~~~~~~~~~~-----~i~W~k~~~~~~--~~--~~~~~~~~~~r~~~~~~~----~~~~~L~i~~v~~~d~G~Y 68 (163)
...+.|.|...+.+.+ .|.|+|.+.... .. .....+....|+...... .++++|.|.+++.+|+|.|
T Consensus 15 G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y 94 (313)
T 4fqp_A 15 GDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRVEDEGNY 94 (313)
T ss_dssp TSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEEECSCCGGGCEEE
T ss_pred CCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEEECcCChhhCEEE
Confidence 3468888887766655 589999543211 11 112223444555544332 2456899999999999999
Q ss_pred EEEEEeCCC--ceEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEec-cCCCCeEEEEECCeEEEecCCce------
Q psy16425 69 MCQVNTDPM--KSQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAAS-GSPKPNITWRREGGELIAQGNGQ------ 139 (163)
Q Consensus 69 ~C~~~~~~~--~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~-~~p~p~v~W~~~~~~~~~~~~~~------ 139 (163)
+|.+.+... ....+.|.+...|....... ...+..|+.+.+.|.+. +.|.|.+.|++++..+.......
T Consensus 95 ~C~v~~~~~~~~~~~~~l~v~~~P~~~~~~~--~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~~~~~~~~~~~~ 172 (313)
T 4fqp_A 95 TCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQ--KVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGT 172 (313)
T ss_dssp EEEEECSSSCEEEEEEEECCBBCCEEEEEEC--CBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEEEEEEECSSTTC
T ss_pred EEEEeeccCcceeeeeeeeeccCCcceeccc--ceEeecCceEEEEEEccCccCCcEEEeecCCccccccceeeeecccc
Confidence 999855433 33444555666666544332 33456788889999875 78999999999987764332211
Q ss_pred -EEeceEEEEcchhhhHh
Q psy16425 140 -EDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 140 -~~~~~l~i~~v~~~~~~ 156 (163)
.....|.|..+..+|++
T Consensus 173 ~~~~s~l~i~~~~~~d~g 190 (313)
T 4fqp_A 173 VTVTSLWILVPSSQVDGK 190 (313)
T ss_dssp EEEEEEEEECCCGGGTTC
T ss_pred cccceeeeecccccccCe
Confidence 12245777777777754
No 198
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.58 E-value=9.1e-14 Score=102.85 Aligned_cols=150 Identities=13% Similarity=0.169 Sum_probs=95.5
Q ss_pred ceeEEEeeeeccC--CCEEEEEEcC-Cce---EEeee------eeEEecCCeEEEEeCC-CceEEEEEcccCCCCCeEEE
Q psy16425 3 ARMLIEIGEMLMA--ESTVAWLRVD-TQT---ILTIQ------THVITKNHRIGVTHSE-TKAWYLHIREVRESDRGWYM 69 (163)
Q Consensus 3 ~~~~~~~~~~~~~--~~~i~W~k~~-~~~---~~~~~------~~~~~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~ 69 (163)
..+.|.|...+.+ .+.|.||+.+ +.. +.... .......+|+.+..+. .+.++|.|.+++.+|+|.|+
T Consensus 16 ~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 95 (457)
T 1hzh_H 16 ASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSLRSADTAVYY 95 (457)
T ss_dssp CCEEECEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSCCGGGCEEEE
T ss_pred CCEEEEEEecCccccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEEEEECCCCcccCEEEE
Confidence 4678888887765 7889999853 221 11110 0011235688776543 35679999999999999999
Q ss_pred EEEEeCCC-------------ceEeEEEEEEc----CCcccccCCCCcEEEeCCCcEEEEeEeccC-CC-CeEEEEECCe
Q psy16425 70 CQVNTDPM-------------KSQVGYLEVVV----PPDILDYPTSTDMVIREGSNVTLKCAASGS-PK-PNITWRREGG 130 (163)
Q Consensus 70 C~~~~~~~-------------~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-p~v~W~~~~~ 130 (163)
|.+.+... ....+.|.|.. +|.+...+. ...+.+|+.+.|.|.+.+. |. +.+.|++++.
T Consensus 96 C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~--~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~~~ 173 (457)
T 1hzh_H 96 CARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAP--SSKSTSGGTAALGCLVKDYFPEPVTVSWNSGAL 173 (457)
T ss_dssp EEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEECC--CSCCCTTCCEEEEEEEESBBSCCCEEEETTTTB
T ss_pred EEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecCc--cccccCCCcEEEEEEEeEEeCCCeEEEEEeCCE
Confidence 99966521 22445677764 344333222 2235789999999999886 65 7899999985
Q ss_pred EEE--------ecCCceEEeceEEEEcchhhh
Q psy16425 131 ELI--------AQGNGQEDFPFFKRTKKKKKK 154 (163)
Q Consensus 131 ~~~--------~~~~~~~~~~~l~i~~v~~~~ 154 (163)
.+. ...........|.|.++..+|
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d 205 (457)
T 1hzh_H 174 TSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT 205 (457)
T ss_dssp CTTEEEEEEEECTTSCEEEEEEEEECSGGGGT
T ss_pred eccceEcCceECCCCCEEEEEEEEecccccCC
Confidence 321 011111223468888888776
No 199
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.57 E-value=7e-15 Score=114.69 Aligned_cols=152 Identities=14% Similarity=0.159 Sum_probs=49.5
Q ss_pred ceeEEEeeeec--cCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCce
Q psy16425 3 ARMLIEIGEML--MAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKS 79 (163)
Q Consensus 3 ~~~~~~~~~~~--~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~ 79 (163)
..+.|.|...+ .+.+.+.|++. +..+.............. ..........|.|.+++.+|+|.|+|.+.+. +...
T Consensus 240 ~~v~L~C~~~~~~~~~~~~~W~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~ 317 (772)
T 3v2a_R 240 EKLVLNCTARTELNVGIDFNWEYP-SSKHQHKKLVNRDLKTQS-GSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKK 317 (772)
T ss_dssp CCEEEEEEEEECTTCCCEEEEECC---------CEEEEC------CCCEEEEEEEEESSCCSTTCSEEEEEEECSSCEEE
T ss_pred CcEEEEEEEecCCCCceeEEEecC-CccCCCceeeeccccccc-cccceEEEEEEEECcCCcCCCeEEEEEEEcCCccee
Confidence 35777888766 55678999994 433211100000000000 0000012348999999999999999999765 3345
Q ss_pred EeEEEEEEcCCcccccC-CCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceEEeceEEEEcchhhhHhh
Q psy16425 80 QVGYLEVVVPPDILDYP-TSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQEDFPFFKRTKKKKKKKKK 157 (163)
Q Consensus 80 ~~~~l~v~~~p~~~~~~-~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~ 157 (163)
..+.|.|..+|.+...+ ......+.+|+.+.|.|.+.++|.|.+.|++++..+...... .....|.|.+++.+|.+.
T Consensus 318 ~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~g~~l~~~~~~-~~~~~L~i~~v~~~d~G~ 395 (772)
T 3v2a_R 318 NSTFVRVHEKPFVAFGSGMESLVEATVGERVRIPAKYLGYPPPEIKWYKNGIPLESNHTI-KAGHVLTIMEVSERDTGN 395 (772)
T ss_dssp EEEEEEEECCCC-------------------------------------------------------------------
T ss_pred EEEEEEEeCCCeeEeccCCCCcEEEcCCCcEEEEEEEeeeCCCeEEEEECCEeCCCCceE-ccceeEEEecCChhcCce
Confidence 56678888887665433 112456788999999999999999999999999887553222 244778899998888763
No 200
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.57 E-value=5.1e-14 Score=94.40 Aligned_cols=128 Identities=16% Similarity=0.309 Sum_probs=83.9
Q ss_pred ceeEEEeeeeccC--CCEEEEEEcC-CceE---Eeee--e-eEE--ecCCeEEEEeCC-CceEEEEEcccCCCCCeEEEE
Q psy16425 3 ARMLIEIGEMLMA--ESTVAWLRVD-TQTI---LTIQ--T-HVI--TKNHRIGVTHSE-TKAWYLHIREVRESDRGWYMC 70 (163)
Q Consensus 3 ~~~~~~~~~~~~~--~~~i~W~k~~-~~~~---~~~~--~-~~~--~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C 70 (163)
.++.|.|...+.+ .+.|.||+.+ +... .... . ... ...+|+.+..+. .++++|.|.+++.+|+|.|.|
T Consensus 16 ~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 95 (215)
T 1c5d_H 16 QTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQTEDTAIYFC 95 (215)
T ss_dssp CCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCCGGGCEEEEE
T ss_pred CcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCCcccCEEEEE
Confidence 4688899887654 5889999863 2211 1110 0 000 124677776543 356799999999999999999
Q ss_pred EEEeCC----CceEeEEEEEEc----CCcccccCCCCcEEEeCCCcEEEEeEeccC-CCC-eEEEEECCeEE
Q psy16425 71 QVNTDP----MKSQVGYLEVVV----PPDILDYPTSTDMVIREGSNVTLKCAASGS-PKP-NITWRREGGEL 132 (163)
Q Consensus 71 ~~~~~~----~~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p-~v~W~~~~~~~ 132 (163)
.+.+.. .....+.|.|.. +|.+...++. ..+.+|+.+.|.|.+.+. |.| .+.|++++..+
T Consensus 96 ~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~--~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~ 165 (215)
T 1c5d_H 96 TREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLAPG--CGDTTSSTVTLGCLVKGYFPEPVTVTWNSGALSS 165 (215)
T ss_dssp EECCSSSCSCCBCCCEEEEECSSCCBCCCEEEECCC--SSCCCCSSEEEEEEEEEEBSSCCEEEEGGGTTCC
T ss_pred EEecCCcccceEcCCEEEEecCCCCCCCeEEeccCC--hhhccCCcEEEEEEEeeeEcCCcEEEEccCCccC
Confidence 996542 122345677763 3333332211 124679999999999985 888 99999988653
No 201
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.57 E-value=6.2e-15 Score=104.91 Aligned_cols=140 Identities=14% Similarity=0.222 Sum_probs=95.6
Q ss_pred ceeEEEee-----eeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCC
Q psy16425 3 ARMLIEIG-----EMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPM 77 (163)
Q Consensus 3 ~~~~~~~~-----~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~ 77 (163)
..+.|.|. ..+.|.+.|.|++ ++..+. ....++..... ...|.|.+++.+|+|.|+|.+.+...
T Consensus 136 ~~v~l~C~~~~~~~~g~p~~~v~W~k-~g~~~~-------~~~~~~~~~~~---~~~L~i~~v~~~d~G~Y~C~a~n~~g 204 (339)
T 3o4o_C 136 TSGVLVCPDLSEFTRDKTDVKIQWYK-DSLLLD-------KDNEKFLSVRG---TTHLLVHDVALEDAGYYRCVLTFAHE 204 (339)
T ss_dssp SCEEEECCSCTTTCCSSSCCCBCCEE-SSCBCC-------TTCSSEEECTT---SSEEEESSCCGGGCEEEEEEEECCBT
T ss_pred CCEEEEecCCcccccCCCCceEEEec-CCeeCC-------CCCceeEEcCC---cceEEEcccCHhhCeEEEEEEEECCC
Confidence 45778888 7888999999999 555442 12234443322 13899999999999999999976522
Q ss_pred -----ceEeEEEEEEc-----CCcccccCCCCcEEEeCCCcEEEEeEe---ccCC-CCeEEEEECCeEEEec--------
Q psy16425 78 -----KSQVGYLEVVV-----PPDILDYPTSTDMVIREGSNVTLKCAA---SGSP-KPNITWRREGGELIAQ-------- 135 (163)
Q Consensus 78 -----~~~~~~l~v~~-----~p~~~~~~~~~~~~~~~g~~~~l~C~~---~~~p-~p~v~W~~~~~~~~~~-------- 135 (163)
....+.|.|.. +|.+... .....+.+|+.+.|.|.+ .|.| .+.+.|++++..+...
T Consensus 205 ~~~~~~~~~~~l~V~~~~~~~~P~i~~~--~~~~~v~~G~~v~L~C~~~~~~g~P~~~~v~W~~~g~~~~~~~~~~~~~~ 282 (339)
T 3o4o_C 205 GQQYNITRSIELRIKKKKEETIPVIISP--LKTISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTE 282 (339)
T ss_dssp TBCCEEEEEEEEEEECCCCCCCCEECCC--SCCCCCCCCSCCCCCCCEEESSSCCSSCEEEEESSSSCSSSSSCSSSCEE
T ss_pred CeEEEEEEEEEEEEEcCCCCCCCEEecC--CceeEeccCCCEEEEEEEECCCCCCCCceEEEEECCeeccccccccccee
Confidence 24455666664 3344332 234567889999999999 8999 8899999998764211
Q ss_pred -CCceE-Eec------eEEEEcchhhhH
Q psy16425 136 -GNGQE-DFP------FFKRTKKKKKKK 155 (163)
Q Consensus 136 -~~~~~-~~~------~l~i~~v~~~~~ 155 (163)
..... ..+ .|.|.+++.+|.
T Consensus 283 ~~~~~~~~~g~~~~~~~L~i~~v~~~d~ 310 (339)
T 3o4o_C 283 GPRQEYSENNENYIEVPLIFDPVTREDL 310 (339)
T ss_dssp CCCEECCCSSSCEEEECCEECSSCCCSC
T ss_pred cceEEecccCceEEEEEEEEEEechhhc
Confidence 11111 112 799999999885
No 202
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.57 E-value=9.7e-15 Score=103.52 Aligned_cols=143 Identities=15% Similarity=0.265 Sum_probs=83.3
Q ss_pred ceeEEEeeeeccCCC--EEEEEEcCCceEEeeeeeEEe--cCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCc
Q psy16425 3 ARMLIEIGEMLMAES--TVAWLRVDTQTILTIQTHVIT--KNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMK 78 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~--~i~W~k~~~~~~~~~~~~~~~--~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~ 78 (163)
..+.|.|...+.|++ .|.|++ ++..+......... ..+.+... ..|.|.....+|+|.|+|.+.+....
T Consensus 133 ~~~~l~C~~~g~p~~~~~v~W~k-~g~~l~~~~~~~~~~~~~~~~~~~------s~L~i~~~~~d~~g~Y~C~a~n~~~~ 205 (327)
T 2wng_A 133 HTVSFTCESHGFSPRDITLKWFK-NGNELSDFQTNVDPVGESVSYSIH------STAKVVLTREDVHSQVICEVAHVTLQ 205 (327)
T ss_dssp CEEEEEEEEEEEBSSCCEEEEEE-TTEECCCEEEEEECSSCCSCEEEE------EEEEEECCTTGGGCEEEEEEECTTSC
T ss_pred CEEEEEEEEeCccCCCcEEEEEE-CCEEccccccccccccCCCceEEE------EEEEEechhcCcCceEEEEEeccccC
Confidence 367888888877765 899999 56555322211111 11222222 25778877777889999999776332
Q ss_pred ----eEeEEE--EEEcCCcccccCCCCcEEEeCCCcEEEEeEeccC-CCC-eEEEEECCeEEEecCCc--eE-------E
Q psy16425 79 ----SQVGYL--EVVVPPDILDYPTSTDMVIREGSNVTLKCAASGS-PKP-NITWRREGGELIAQGNG--QE-------D 141 (163)
Q Consensus 79 ----~~~~~l--~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p-~v~W~~~~~~~~~~~~~--~~-------~ 141 (163)
.....+ .+..+|.+...+. .+.+|+.+.|.|.+.|. |++ .+.|+++|..+...... .. .
T Consensus 206 ~~~~~~~~~~~~~v~~~P~i~~~~~----~~~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~ 281 (327)
T 2wng_A 206 GDPLRGTANLSETIRVPPTLEVTQQ----PVRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNW 281 (327)
T ss_dssp SCCEEEEEEGGGTBCBCCEEEEEEE----CCSSTTCCEEEEEEEEEBSSCEEEEEEETTEEEEEEECCSCEECTTSCEEE
T ss_pred CCcccceEEeccccCCCCEEEEecC----CcCCCCcEEEEEEEccccCCCcEEEEEECCeEccCcccCceEECCCCcEEE
Confidence 122222 2345565544322 16789999999999985 444 79999999987653211 11 1
Q ss_pred eceEEEEcchhhhHh
Q psy16425 142 FPFFKRTKKKKKKKK 156 (163)
Q Consensus 142 ~~~l~i~~v~~~~~~ 156 (163)
...|.|..+..+|.+
T Consensus 282 ~~~L~i~~~~~~d~G 296 (327)
T 2wng_A 282 MSWLLVNVSAHRDDV 296 (327)
T ss_dssp EEEEEC-------CC
T ss_pred EEEEEEccccccCCC
Confidence 134777777777754
No 203
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.56 E-value=2.5e-14 Score=101.41 Aligned_cols=145 Identities=14% Similarity=0.201 Sum_probs=87.5
Q ss_pred ceeEEEeeeecc-CCC---EEEEEEcCCceEEeeeeeE-EecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCC
Q psy16425 3 ARMLIEIGEMLM-AES---TVAWLRVDTQTILTIQTHV-ITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPM 77 (163)
Q Consensus 3 ~~~~~~~~~~~~-~~~---~i~W~k~~~~~~~~~~~~~-~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~ 77 (163)
..+.|.|...+. |.+ .|.|++.++..+....... ...++++. ....|.|.+++.+|+|.|+|.+.+...
T Consensus 129 ~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~------~~~~L~I~~~~~~D~G~Y~C~a~n~~~ 202 (323)
T 2wqr_A 129 KSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLT------VTSTLPVGTRDWIEGETYQCRVTHPHL 202 (323)
T ss_dssp SCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEEECTTSCEE------EEEEEECCHHHHHTTCCEEEEEECTTS
T ss_pred CeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCccCCCCCEE------EEEEEEECHHHccCCCCEEEEEECCCC
Confidence 357888887765 445 8999995544432111110 01222322 123799999999999999999976532
Q ss_pred ceEeEEEEEE------cCCcccccCCCCcEEEeCCCcEEEEeEecc-CCCC-eEEEEECCeEEEecCC-----------c
Q psy16425 78 KSQVGYLEVV------VPPDILDYPTSTDMVIREGSNVTLKCAASG-SPKP-NITWRREGGELIAQGN-----------G 138 (163)
Q Consensus 78 ~~~~~~l~v~------~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p-~v~W~~~~~~~~~~~~-----------~ 138 (163)
.....+.+. .+|.+...+... ....|+.+.|.|.+.| .|++ .+.|++++..+..... .
T Consensus 203 -~~~~~~~v~~~~~~~~~P~v~~~~~~~--~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~ 279 (323)
T 2wqr_A 203 -PRALMRSTTKTSGPRAAPEVYAFATPE--WPGSRDKRTLACLIQNFMPEDISVQWLHNEVQLPDARHSTTQPRKTKGSG 279 (323)
T ss_dssp -SSCEEEEECCCCSCCBCCEEEEEECCC--CTTCTTEEEEEEEEEEEBSSCCEEEEEETTEECCGGGEEECCCEECSSSS
T ss_pred -CCCeeeEEEccCCCCCCCEEEEeCCCh--HHhcCCcEEEEEEeeeeeCCCcEEEEEECCEECCCCceeecCcccCCCCc
Confidence 222234442 344443322211 1123999999999988 4544 7999999988643210 0
Q ss_pred eEEeceEEEEcchhhhHh
Q psy16425 139 QEDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 139 ~~~~~~l~i~~v~~~~~~ 156 (163)
....+.|.|..+..+|.+
T Consensus 280 ~~~~s~L~i~~~~~~d~g 297 (323)
T 2wqr_A 280 FFVFSRLEVTRAEWEQKD 297 (323)
T ss_dssp EEEEEEEEEEHHHHHHCC
T ss_pred EEEEEEEEEChHHccCCC
Confidence 112356888888877754
No 204
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.55 E-value=1.7e-14 Score=106.28 Aligned_cols=131 Identities=15% Similarity=0.188 Sum_probs=95.6
Q ss_pred ceeEEEeeeeccCCCEE-----EEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCC-
Q psy16425 3 ARMLIEIGEMLMAESTV-----AWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDP- 76 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i-----~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~- 76 (163)
..+.|.|...+ |.+.+ .|++. +..+ ...+ ...|.|.+++. |+| |+|.+.+.+
T Consensus 15 ~~v~L~C~~~g-p~p~~~~~~~~w~k~-~~~~---------~~~~---------~~~l~i~~v~~-d~g-Y~C~a~~~~~ 72 (450)
T 1z7z_I 15 GSVLVTCSTSC-DQPMLLGIETPLPKK-ELLL---------PGNN---------RKVYELSNVQE-DSQ-PMCYSNCPDG 72 (450)
T ss_dssp EEEEEEEECCS-SCCCEEEECSSSCEE-ECCS---------STTT---------EEEEEEEEECS-CBC-CEEEEEETTE
T ss_pred CcEEEEEEccC-CCcccccccceeeec-ceEe---------cCCC---------ceEEEEEeccc-CCe-eEEEEeCCCC
Confidence 46888999888 88888 89983 3211 0111 22789999987 999 999996553
Q ss_pred CceEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCC---eEEEEECCeEEEecCCc-eEEeceEEEEcchh
Q psy16425 77 MKSQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKP---NITWRREGGELIAQGNG-QEDFPFFKRTKKKK 152 (163)
Q Consensus 77 ~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p---~v~W~~~~~~~~~~~~~-~~~~~~l~i~~v~~ 152 (163)
..+..+.|.|..+|....... ....+.+|+++.|.|.+.+.|+| .+.|++++..+...... ....+.|.|.++..
T Consensus 73 ~~~~~~~l~V~~~P~~~~~~~-~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~~~~~~~~~~~~L~i~~~~~ 151 (450)
T 1z7z_I 73 QSTAKTFLTVYWTPERVELAP-LPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVGEPAEVTTTVLVRRD 151 (450)
T ss_dssp EEEEECEEEEEBCCSEEEECC-CCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECCTTTEEEEEEEECCSS
T ss_pred cceeEEEEEEEeCCCcceecC-CCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEeecccccccccceEEEEEeecc
Confidence 344566788888887654332 24568899999999999998888 89999999988655322 12346899999888
Q ss_pred hhHh
Q psy16425 153 KKKK 156 (163)
Q Consensus 153 ~~~~ 156 (163)
+|.+
T Consensus 152 ~d~G 155 (450)
T 1z7z_I 152 HHGA 155 (450)
T ss_dssp CSSC
T ss_pred ccCc
Confidence 8765
No 205
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.55 E-value=1.1e-14 Score=102.86 Aligned_cols=135 Identities=13% Similarity=0.108 Sum_probs=89.4
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC------C
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD------P 76 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~------~ 76 (163)
..+.|.|...+. .+.+.|+| ++..+... . ........|.|.+++.+|+|.|+|.+.+. .
T Consensus 39 ~~v~L~C~~~~~-~~~~~W~k-~g~~~~~~---------~----~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~~~ 103 (316)
T 3vh8_G 39 GHVTLRCHYRHR-FNNFMLYK-EDRIHIPI---------F----HGRIFQESFNMSPVTTAHAGNYTCRGSHPHSPTGWS 103 (316)
T ss_dssp SCEEEEEEBTTB-CCSEEEEE-SSCSSSCH---------H----HHCCBSSCEEECSCCGGGCEEEEEEEBCSSSSSSBC
T ss_pred CCEEEEEEccCC-CceEEEEe-CCCcccee---------e----cCCcceEEEEECCCCcccCeEEEEEEEcCCCCccee
Confidence 467888888776 68899999 44432110 0 00011237999999999999999998642 1
Q ss_pred CceEeEEEEEEcC---CcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCc-----eEEeceEEEE
Q psy16425 77 MKSQVGYLEVVVP---PDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNG-----QEDFPFFKRT 148 (163)
Q Consensus 77 ~~~~~~~l~v~~~---p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~-----~~~~~~l~i~ 148 (163)
..+....|.|... |.+...+ ...+.+|+++.|.|.+. .+++.+.|++++..+...... ....+.|.|.
T Consensus 104 ~~s~~~~l~V~~~~~~p~~~~~~---~~~v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~ 179 (316)
T 3vh8_G 104 APSNPVVIMVTGNHRKPSLLAHP---GPLVKSGERVILQCWSD-IMFEHFFLHKEGISKDPSRLVGQIHDGVSKANFSIG 179 (316)
T ss_dssp CCCCCEEEEEECSSCCCEEEEES---CSEEETTCCEEEEEEES-SCCSEEEEEETTCCSCCEEEECEEETTEEEEEEEEC
T ss_pred cCCCcEEEEEecCCCCCeEEecC---CCccCCCCeEEEEEcCC-CCCcEEEEEECCCccccceeeeeecCCCceEEEEEC
Confidence 2334456666543 3333322 22378999999999995 466789999998765322111 1255789999
Q ss_pred cchhhhHh
Q psy16425 149 KKKKKKKK 156 (163)
Q Consensus 149 ~v~~~~~~ 156 (163)
+|+.+|.+
T Consensus 180 ~v~~~D~G 187 (316)
T 3vh8_G 180 PMMLALAG 187 (316)
T ss_dssp SCCGGGCE
T ss_pred CCChhhCc
Confidence 99999875
No 206
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.54 E-value=7.4e-14 Score=95.83 Aligned_cols=129 Identities=19% Similarity=0.383 Sum_probs=81.4
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCC-ce---EEeeee----eEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDT-QT---ILTIQT----HVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNT 74 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~-~~---~~~~~~----~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~ 74 (163)
.++.|.|... .+.+.|.||+... .. +..... ......+|+.+.....++++|.|.+++.+|+|.|.|.+.+
T Consensus 19 ~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 97 (252)
T 1oga_E 19 QNVTLSCEQN-LNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTSAQKNPTAFYLCASSS 97 (252)
T ss_dssp CCEEECCEEC-SCCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECSCCSCCCEEEEEEEES
T ss_pred CcEEEEEEeC-CCCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECcCChhhCEEEEEEEec
Confidence 4678888864 5678999999642 11 111100 0011346777765434567899999999999999999966
Q ss_pred CC----CceEeEEEEEEc------CCcccccCCCCcEEEeCCCcEEEEeEeccC-CCC-eEEEEECCeEEE
Q psy16425 75 DP----MKSQVGYLEVVV------PPDILDYPTSTDMVIREGSNVTLKCAASGS-PKP-NITWRREGGELI 133 (163)
Q Consensus 75 ~~----~~~~~~~l~v~~------~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p-~v~W~~~~~~~~ 133 (163)
.. .......|.|.. +|.+..... ....+.+|+.+.|.|.+.+. |.+ .+.|++++..+.
T Consensus 98 ~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~-~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~~l~ 167 (252)
T 1oga_E 98 RSSYEQYFGPGTRLTVTEDLKNVFPPEVAVFEP-SEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVH 167 (252)
T ss_dssp STTSCCEECCCEEEEEESCGGGCBCCEEEEECC-CHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEEC
T ss_pred CCccceeECCCEEEEEecccCCCCCCeEEEECC-ChhhhccCCceEEEEEEeeEcCCCcEEEEEECCEECC
Confidence 41 112234566653 333322111 11223368999999999974 754 899999998764
No 207
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.54 E-value=1.2e-13 Score=93.62 Aligned_cols=129 Identities=16% Similarity=0.276 Sum_probs=82.2
Q ss_pred ceeEEEeeeecc--CCCEEEEEEcCC-ce---EEeee-ee---EEe-cCCeEEEEeCC-CceEEEEEcccCCCCCeEEEE
Q psy16425 3 ARMLIEIGEMLM--AESTVAWLRVDT-QT---ILTIQ-TH---VIT-KNHRIGVTHSE-TKAWYLHIREVRESDRGWYMC 70 (163)
Q Consensus 3 ~~~~~~~~~~~~--~~~~i~W~k~~~-~~---~~~~~-~~---~~~-~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C 70 (163)
.++.|.|...+. +.+.|.||+... .. +.... .. ... ..+|+.+..+. .++++|.|.+++.+|+|.|.|
T Consensus 17 ~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 96 (230)
T 1ypz_F 17 ETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYSLEEEDEAIYYC 96 (230)
T ss_dssp SCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEECSCCGGGCSEEEE
T ss_pred CcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEECcCChhhCEEEEE
Confidence 467888887664 668899998642 11 11111 10 111 46788877643 367899999999999999999
Q ss_pred EEEeC---C--CceEeEEEEEEc---------CCcccccCCCCcEEEeCCCcEEEEeEeccC-CC-CeEEEEE-CCeEE
Q psy16425 71 QVNTD---P--MKSQVGYLEVVV---------PPDILDYPTSTDMVIREGSNVTLKCAASGS-PK-PNITWRR-EGGEL 132 (163)
Q Consensus 71 ~~~~~---~--~~~~~~~l~v~~---------~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-p~v~W~~-~~~~~ 132 (163)
.+.+. . .......|.|.. +|......+ ....+.+|+.+.|.|.+.+. |. +.+.|++ ++..+
T Consensus 97 ~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~~v~~p-~~~~v~~g~~~~L~C~~~g~~P~~~~v~W~~~~g~~l 174 (230)
T 1ypz_F 97 SYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLP-SVAETNLHKTGTYLCLLEAFFPDVIRVYWKEKDGNTI 174 (230)
T ss_dssp EECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCCCCEECC-CHHHHHHHSCEEEEEEEEEESSCCCEEEEECTTSSCB
T ss_pred EEECCCCCcccccCCCEEEEEecccccCcccCCCCceEECC-CchhhccCCcceEEEEEeeecCCCeEEEEEccCCeEc
Confidence 99653 1 112335677762 232222111 12223468899999999875 75 5899999 76654
No 208
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.53 E-value=1.6e-13 Score=95.64 Aligned_cols=151 Identities=15% Similarity=0.235 Sum_probs=93.6
Q ss_pred ceeEEEeeeecc--CCCEEEEEEcCC-ce---EEeee------eeEEecCCeEEEEeCC-CceEEEEEcccCCCCCeEEE
Q psy16425 3 ARMLIEIGEMLM--AESTVAWLRVDT-QT---ILTIQ------THVITKNHRIGVTHSE-TKAWYLHIREVRESDRGWYM 69 (163)
Q Consensus 3 ~~~~~~~~~~~~--~~~~i~W~k~~~-~~---~~~~~------~~~~~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~ 69 (163)
..+.|.|...+. +.+.|.||+... .. +.... .......+|+.+..+. ...++|.|.+++.+|+|.|.
T Consensus 16 ~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~ 95 (280)
T 3fku_X 16 SSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRSLRSEDTAVYY 95 (280)
T ss_dssp CCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECSCCSTTCEECC
T ss_pred CcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECCCChhhCEEEE
Confidence 467888887654 668999998531 11 11111 1111234577776543 45679999999999999999
Q ss_pred EEEEeC--------C--CceEeEEEEEEc---------------CCcccccCCCCcEEEeCCCcEEEEeEecc-CC-CCe
Q psy16425 70 CQVNTD--------P--MKSQVGYLEVVV---------------PPDILDYPTSTDMVIREGSNVTLKCAASG-SP-KPN 122 (163)
Q Consensus 70 C~~~~~--------~--~~~~~~~l~v~~---------------~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p-~p~ 122 (163)
|.+.+. . .......|.|.. ++.+... +...+.+|+++.|.|.+.+ .+ .+.
T Consensus 96 C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~---p~~~v~~G~~v~L~C~~~~~~~~~~~ 172 (280)
T 3fku_X 96 CARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQP---PSVSKGLRQTATLTCTGNSNNVGNQG 172 (280)
T ss_dssp EEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCC---SEEEECTTCCEEEEEECCCCCCCTTC
T ss_pred EEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeC---CcEEEecCCCEEEEEEecCCCCCCce
Confidence 999654 1 112234566654 2333332 2377899999999999987 44 478
Q ss_pred EEEEEC--CeEEEe------------cCCceE----EeceEEEEcchhhhHh
Q psy16425 123 ITWRRE--GGELIA------------QGNGQE----DFPFFKRTKKKKKKKK 156 (163)
Q Consensus 123 v~W~~~--~~~~~~------------~~~~~~----~~~~l~i~~v~~~~~~ 156 (163)
+.|++. +..+.. ..+... ....|+|.+++.+|.+
T Consensus 173 v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG 224 (280)
T 3fku_X 173 AAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDEA 224 (280)
T ss_dssp CEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGCS
T ss_pred EEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHCE
Confidence 999873 222211 011111 1235999999999875
No 209
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.52 E-value=4.5e-13 Score=98.75 Aligned_cols=150 Identities=16% Similarity=0.225 Sum_probs=93.9
Q ss_pred ceeEEEeeeeccC--CCEEEEEEcC-CceEEeee---------eeEEecCCeEEEEeCC-CceEEEEEcccCCCCCeEEE
Q psy16425 3 ARMLIEIGEMLMA--ESTVAWLRVD-TQTILTIQ---------THVITKNHRIGVTHSE-TKAWYLHIREVRESDRGWYM 69 (163)
Q Consensus 3 ~~~~~~~~~~~~~--~~~i~W~k~~-~~~~~~~~---------~~~~~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~ 69 (163)
..+.|.|...+.+ .+.|.||+.+ +....... .......+|+.+..+. .++++|.|.+++.+|+|.|.
T Consensus 16 ~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 95 (444)
T 1igt_B 16 GSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSRLKSEDTAMYY 95 (444)
T ss_dssp CCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEE
T ss_pred CCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEEEECCCCHHHCEEEE
Confidence 4688888887653 6789999864 22221100 0001234678776543 35679999999999999999
Q ss_pred EEEEeCCC----ceEeEEEEEEc----CCcccccCCCCcEEEeCCCcEEEEeEeccC-CCC-eEEEEECCeEE--EecCC
Q psy16425 70 CQVNTDPM----KSQVGYLEVVV----PPDILDYPTSTDMVIREGSNVTLKCAASGS-PKP-NITWRREGGEL--IAQGN 137 (163)
Q Consensus 70 C~~~~~~~----~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p-~v~W~~~~~~~--~~~~~ 137 (163)
|.+.+... ....+.|.|.. +|.+...+.. ..+.+|+.+.|.|.+.|. |.| .+.|++++..+ .....
T Consensus 96 C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~--~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~ 173 (444)
T 1igt_B 96 CARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPV--CGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPA 173 (444)
T ss_dssp EEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCC--SSCCCSSCEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCC
T ss_pred EEEecCCcccccccCcEEEEecCCCCCCCceeEeccc--ccCCCCCcEEEEEEEcceeCCCcEEEEecCCCCCCeEecCc
Confidence 99976532 12334666653 3433322221 124689999999999874 777 99999988752 11111
Q ss_pred ----c-eEEeceEEEEcchhhh
Q psy16425 138 ----G-QEDFPFFKRTKKKKKK 154 (163)
Q Consensus 138 ----~-~~~~~~l~i~~v~~~~ 154 (163)
. ....+.|+|.++..+|
T Consensus 174 ~~~~~~~~~~s~L~i~~~~~~d 195 (444)
T 1igt_B 174 VLQSDLYTLSSSVTVTSSTWPS 195 (444)
T ss_dssp EEETTEEEEEEEEEECSTTTTT
T ss_pred cccCCcEEEEEEEEEchhhcCC
Confidence 1 1123567888887666
No 210
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.52 E-value=7.2e-14 Score=97.12 Aligned_cols=134 Identities=17% Similarity=0.190 Sum_probs=89.2
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.|.|...+ .|.|++.+ .... +. .......+|.|.+++.+|+|.|+|.+.+. +.....
T Consensus 20 ~~v~L~C~~~~----~v~W~~~~-~~~~-----------~~---~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 80 (289)
T 3ejj_X 20 ETVTLRCVSNG----SVEWDGPI-SPYW-----------TL---DPESPGSTLTTRNATFKNTGTYRCTELEDPMAGSTT 80 (289)
T ss_dssp CCEEEEEECSS----CCEEECSC-SSSS-----------EE---CCCSSCCEEEESSCCGGGCEEEEEECCC-----CEE
T ss_pred CCEEEEEEeCC----cEEEccCC-CceE-----------EE---eccCCccEEEEeeeccccCEEEEEEEeccCCcceeE
Confidence 35778887765 48999743 2210 00 01112348999999999999999998554 445666
Q ss_pred EEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCe-EEEEEC-CeEEEecCCce-EEeceEEEEcchhhhHh
Q psy16425 82 GYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPN-ITWRRE-GGELIAQGNGQ-EDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 82 ~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~-v~W~~~-~~~~~~~~~~~-~~~~~l~i~~v~~~~~~ 156 (163)
+.|.|..+|....... ....+.+|+++.|.|.+.+.|.+. +.|++. +..+....... ..++.|.|.+++.+|.+
T Consensus 81 ~~l~V~~~~~~~~~~~-~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G 157 (289)
T 3ejj_X 81 IHLYVKDPAHSWNLLA-QEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFFSPWRGFIIRKAKVLDSN 157 (289)
T ss_dssp EEEEECCSSCSEEESC-SEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEEEETTTEEEESSCCGGGCE
T ss_pred EEEEEeCCCcceeccc-ceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCccEEECCCCCEEEeecccccCE
Confidence 7788877665422222 467788999999999999877665 999874 44443332322 24567999999998875
No 211
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.52 E-value=5.5e-14 Score=93.78 Aligned_cols=122 Identities=16% Similarity=0.222 Sum_probs=76.0
Q ss_pred ceeEEEeeeeccC----CCEEEEEEcCCceEEeeeee--EEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCC
Q psy16425 3 ARMLIEIGEMLMA----ESTVAWLRVDTQTILTIQTH--VITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDP 76 (163)
Q Consensus 3 ~~~~~~~~~~~~~----~~~i~W~k~~~~~~~~~~~~--~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~ 76 (163)
.++.|.|...+.+ ...|.|++.+ ..+...... .....+++.. ...|.|.+++.+|+|.|+|.+.+..
T Consensus 19 ~~v~L~C~~~g~~~~p~~~~v~W~k~~-~~~~~~~~~~~~~~~~~~~~~------~~~L~I~~~~~~D~G~Y~C~a~~~~ 91 (207)
T 2vol_A 19 LTPKVTCVVVDISKDDPEVQFSWFVDD-VEVHTAQTKPREEQFNSTFRS------VSELPIMHQDWLNGKEFKCRVNSAA 91 (207)
T ss_dssp SCCEEEEEEEEECTTCCCCEEEEEETT-EEECCCEEECCCEETTTEEEE------EEEEECCHHHHHTTCCEEEEEECTT
T ss_pred CceEEEEEEeCcccCCCceEEEEEECC-ccccccccCCCcCcCCCcEEE------EEEEEEehhHcCCCCEEEEEEEccC
Confidence 4678888887764 3599999954 433211100 0011223322 2379999999999999999997653
Q ss_pred Cc-eEeEEE----EEEcCCcccccCCCCcEEEeCCCcEEEEeEecc-CCC-CeEEEEECCeEEE
Q psy16425 77 MK-SQVGYL----EVVVPPDILDYPTSTDMVIREGSNVTLKCAASG-SPK-PNITWRREGGELI 133 (163)
Q Consensus 77 ~~-~~~~~l----~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~-p~v~W~~~~~~~~ 133 (163)
.. .....+ .+..+|.+...+.... ..+|+.+.|.|.+.| .|+ +.+.|+++|..+.
T Consensus 92 ~~~~~~~~v~~~~~~~~~P~v~~~~~~~~--~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~ 153 (207)
T 2vol_A 92 FPAPIEKTISKTKGRPKAPQVYTLPPPKE--QMAKDKVSLTCMITDFFPEDITVEWESNGQPAE 153 (207)
T ss_dssp CSSCEEEEECCCCCCCBCCEEEEECCCTG--GGSSSEEEEEEEEEEEBSSCCEEEEEETTEECS
T ss_pred CCCceEEEeccCCCCCcCCeEEEeCCCHH--HhcCCceEEEEEEeeEECCCCEEEEEECCEecc
Confidence 32 222233 3344665544332211 235899999999998 455 3899999998763
No 212
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.51 E-value=3.7e-13 Score=97.36 Aligned_cols=145 Identities=12% Similarity=0.170 Sum_probs=94.0
Q ss_pred eeEEEee-eeccCCCEEEEEEcCC--ceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCe---EEEEEEEeCCC
Q psy16425 4 RMLIEIG-EMLMAESTVAWLRVDT--QTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRG---WYMCQVNTDPM 77 (163)
Q Consensus 4 ~~~~~~~-~~~~~~~~i~W~k~~~--~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G---~Y~C~~~~~~~ 77 (163)
.+.|.|. ..+.|.+.|.|++.+. ..... ......++.....+ +|.|.+++.+|+| .|+|.+.+...
T Consensus 117 ~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~----~~~~~~~~~~~~~~----~L~i~~v~~~d~G~~~~Y~C~a~n~~~ 188 (395)
T 1bih_A 117 PFQLDCVLPNAYPKPLITWKKRLSGADPNAD----VTDFDRRITAGPDG----NLYFTIVTKEDVSDIYKYVCTAKNAAV 188 (395)
T ss_dssp EEEECCCCCEEESCCEEEEEEEETTSCGGGC----CCCCCTTEEECTTS----CEEEEEECGGGCCSSEEEEEEEECTTC
T ss_pred cEEEEecCCCCCCCCeEEEEecCCCcCcccc----cccccccEEEcCCC----cEEEEEEeeccCCCceEEEEEEEeccc
Confidence 5778888 4788999999999531 11100 00113455544443 7999999999999 99999976632
Q ss_pred c-eEeEEEEEE---cCCc-------ccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceE------
Q psy16425 78 K-SQVGYLEVV---VPPD-------ILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQE------ 140 (163)
Q Consensus 78 ~-~~~~~l~v~---~~p~-------~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~------ 140 (163)
. ......... ..+. .... ......+.+|+.+.|.|.+.|.|.|.+.|++++..+........
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~g~~~~~~~~~~~~~~~~~ 267 (395)
T 1bih_A 189 DEEVVLVEYEIKGVTKDNSGYKGEPVPQY-VSKDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRT 267 (395)
T ss_dssp SSCEEEEEEEECCCBCCSSCCCCCCEEEE-ECCSEEEETTSCEEEEEEEECSSCCCCEEEETTEECCCCTTSSEESCSSS
T ss_pred ceEEEeeeEEecccccccccccCCcCcee-cCCceEEECCCcEEEEEEeccCCCCeEEEEECCEEcCCCCceeEEEEecC
Confidence 2 222211111 1100 0000 11356788999999999999999999999999988754432221
Q ss_pred EeceEEEEcchhhhHhh
Q psy16425 141 DFPFFKRTKKKKKKKKK 157 (163)
Q Consensus 141 ~~~~l~i~~v~~~~~~~ 157 (163)
.+..|.|.+++.+|.+.
T Consensus 268 ~~~~L~i~~~~~~d~G~ 284 (395)
T 1bih_A 268 SGKRLLFKTTLPEDEGV 284 (395)
T ss_dssp TTSEEEESSCCGGGCEE
T ss_pred CCceEEEccCChhhCEE
Confidence 22379999999998753
No 213
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.51 E-value=4.8e-13 Score=90.62 Aligned_cols=150 Identities=10% Similarity=0.146 Sum_probs=84.0
Q ss_pred ceeEEEeeeecc--CCCEE--EEEEcCC-ce---EEee--ee------eEEecCCeEEEEeCC-CceEEEEEcccCCCCC
Q psy16425 3 ARMLIEIGEMLM--AESTV--AWLRVDT-QT---ILTI--QT------HVITKNHRIGVTHSE-TKAWYLHIREVRESDR 65 (163)
Q Consensus 3 ~~~~~~~~~~~~--~~~~i--~W~k~~~-~~---~~~~--~~------~~~~~~~r~~~~~~~-~~~~~L~i~~v~~~d~ 65 (163)
.++.|.|...+. ....+ .||+... .. +... .. ......+|+.+.... .++++|.|.+++.+|+
T Consensus 16 ~~v~L~C~~~~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~Ds 95 (232)
T 3qhz_H 16 QTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQVVLTMTNMDPVDT 95 (232)
T ss_dssp SCEEEEEEEESCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEEEEEECSCCGGGC
T ss_pred CcEEEEEEEeCcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEEEEEECcCChhhC
Confidence 468888887643 22344 9998532 11 1111 00 001234688877654 4678999999999999
Q ss_pred eEEEEEEEeCC---------CceEeEEEEEEc----CCcccccCCCCcEEEeCCCcEEEEeEeccCCC--CeEEEEECCe
Q psy16425 66 GWYMCQVNTDP---------MKSQVGYLEVVV----PPDILDYPTSTDMVIREGSNVTLKCAASGSPK--PNITWRREGG 130 (163)
Q Consensus 66 G~Y~C~~~~~~---------~~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~--p~v~W~~~~~ 130 (163)
|.|.|.+.+.. .......+.|.. .|.+...+. ...+..|+.+.|.|.+.+.++ ..+.|++++.
T Consensus 96 G~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~--~~~~~~g~~v~L~C~~~~~~P~~~~v~W~~~g~ 173 (232)
T 3qhz_H 96 ATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSASTKGPSVFPLAP--SSKSTSGGTAALGCLVKDYFPEPVTVSWNSGAL 173 (232)
T ss_dssp EEEEEEEECCC---CCCCCCEECCCEEEEECSSCCBCCEEEEECC---------CEEEEEEEEEEEBSSCCEEEEGGGTB
T ss_pred EEEEEEEeeccCccccccceeeCCCeEEEEecCCCCCCEEEEecc--cccccCCCcEEEEEEEeeEeCCCeEEEEEECCE
Confidence 99999996541 122334566652 333332221 234556999999999987443 3588999885
Q ss_pred EEE--------ecCCceEEeceEEEEcchhhh
Q psy16425 131 ELI--------AQGNGQEDFPFFKRTKKKKKK 154 (163)
Q Consensus 131 ~~~--------~~~~~~~~~~~l~i~~v~~~~ 154 (163)
.+. ..+........|+|..+..+|
T Consensus 174 ~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~ 205 (232)
T 3qhz_H 174 TSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT 205 (232)
T ss_dssp CTTEEECCCEECTTSCEEEEEEEEEEGGGGGT
T ss_pred ecceeeccceeCCCCCEEEEEEEEEchhhcCC
Confidence 321 111111223467777766554
No 214
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.50 E-value=1.7e-13 Score=100.98 Aligned_cols=138 Identities=14% Similarity=0.116 Sum_probs=87.2
Q ss_pred ceeEEEeeeeccCCC---EEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCC-c
Q psy16425 3 ARMLIEIGEMLMAES---TVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPM-K 78 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~---~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~-~ 78 (163)
.++.|.|...+.|++ .|.|++ ++..+..... . ....+..|.|.+++.+|+|.|+|.+.+... .
T Consensus 102 ~~v~L~C~~~g~~~~~~~~v~W~k-~g~~l~~~~~---~---------~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 168 (450)
T 1z7z_I 102 KNLTLRCQVEGGAPRANLTVVLLR-GEKELKREPA---V---------GEPAEVTTTVLVRRDHHGANFSCRTELDLRPQ 168 (450)
T ss_dssp SEEEEEEEEECCBCGGGEEEEEEE-TTEEEEEEEC---C---------TTTEEEEEEEECCSSCSSCEEEEEEEEECGGG
T ss_pred CeEEEEEEecCCCCCcCcEEEEee-CCEEeecccc---c---------ccccceEEEEEeeccccCceEEEEEEcccCCC
Confidence 468899999988888 999999 5655532110 0 011234899999999999999999976522 1
Q ss_pred e--------EeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccC-C--CCeEEEEECCeEEEecCCceEEeceEEE
Q psy16425 79 S--------QVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGS-P--KPNITWRREGGELIAQGNGQEDFPFFKR 147 (163)
Q Consensus 79 ~--------~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p--~p~v~W~~~~~~~~~~~~~~~~~~~l~i 147 (163)
. ....+.+...|....... ....+.+|+.+.|.|.+.+. | .+.+.|++++..+... ....+..+.+
T Consensus 169 ~~~~~~~~s~~~~l~v~~~~~~~p~~~-~~~~v~~G~~v~l~C~~~g~~P~~~~~~~W~~~~~~~~~~--~~~~~~~~~~ 245 (450)
T 1z7z_I 169 GLELFENTSAPYQLQTFVLPATPPQLV-SPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPT--VTYGNDSFSA 245 (450)
T ss_dssp TSCEEEEECCCEECEECCCCSSCCEEE-CCSEEETTSEEEEEEEEESCTTGGGCEEEEEETTEECCCE--EEEETTEEEE
T ss_pred CceEEeeccCccceeeeccCCCCCEec-CceeEEeCCcEEEEEEeeCCCCCCceEEEEeCCCEeCCce--EEecCCceeE
Confidence 1 223344443311100000 11568899999999999998 7 6899999999876542 2222222222
Q ss_pred E---cchhhhHh
Q psy16425 148 T---KKKKKKKK 156 (163)
Q Consensus 148 ~---~v~~~~~~ 156 (163)
. +++.+|.+
T Consensus 246 ~~~~~v~~~d~G 257 (450)
T 1z7z_I 246 KASVSVTAEDEG 257 (450)
T ss_dssp EEEEECCGGGCE
T ss_pred EEEEEeEhhhCC
Confidence 2 56677655
No 215
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.50 E-value=1.8e-13 Score=82.14 Aligned_cols=78 Identities=17% Similarity=0.285 Sum_probs=57.4
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
.++.|.|...+.|.|.|.|++ ++..+ ....++.+...+ ...+|.|.+++.+|+|.|+|.+.|. +.....
T Consensus 29 ~~~~l~C~~~G~P~p~v~W~k-~g~~l--------~~~~~~~~~~~~-~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~ 98 (107)
T 3knb_B 29 AEAELKCVVLGEPPPVVVWEK-GGQQL--------AASERLSFPADG-AEHGLLLTAALPTDAGVYVCRARNAAGEAYAA 98 (107)
T ss_dssp SCEEEEEEEEEESCCEEEEEE-TTEEC--------CCCSSEECCEET-TEEEEEESSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEEEecCCEEEEEE-Ccccc--------cceeeEEEeecC-ceEEEEEecCChhhCEEEEEEEEECCCEEEEE
Confidence 468889999999999999999 56554 233455444332 3458999999999999999999876 445556
Q ss_pred EEEEEEcCC
Q psy16425 82 GYLEVVVPP 90 (163)
Q Consensus 82 ~~l~v~~~p 90 (163)
+.|.|..+|
T Consensus 99 ~~l~V~~pP 107 (107)
T 3knb_B 99 AAVTVLEPP 107 (107)
T ss_dssp EEEEEEC--
T ss_pred EEEEEEcCC
Confidence 777777654
No 216
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.49 E-value=1.9e-12 Score=86.37 Aligned_cols=143 Identities=17% Similarity=0.220 Sum_probs=85.3
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCC-c-e-EEeeeeeEEecCCeEEEEeC--CCceEEEEEcccCCCCCeEEEEEEEeCCC
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDT-Q-T-ILTIQTHVITKNHRIGVTHS--ETKAWYLHIREVRESDRGWYMCQVNTDPM 77 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~-~-~-~~~~~~~~~~~~~r~~~~~~--~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~ 77 (163)
..+.|.|...+.+ +.|.||+.+. . . ............+|+.+..+ ..++++|.|.+++.+|+|.|.|.+.+...
T Consensus 17 ~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 95 (207)
T 1ypz_E 17 TDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLEDSGTYFCAADTWHI 95 (207)
T ss_dssp CCEEEEEEESSCC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGGCEEEEEEEECBCC
T ss_pred CcEEEEEEEeCCC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHHCEEEEEEEecCCc
Confidence 4678888876554 4899999642 1 1 11111111224577887765 24678999999999999999999965421
Q ss_pred ------------ceEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEecc-CCC-CeEEEEECCeEEEecCCce--EE
Q psy16425 78 ------------KSQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASG-SPK-PNITWRREGGELIAQGNGQ--ED 141 (163)
Q Consensus 78 ------------~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~-p~v~W~~~~~~~~~~~~~~--~~ 141 (163)
......|.|...+..... +...+..+ .+.|.|.+.+ .|. +.+.|+++ ..+....... ..
T Consensus 96 ~~p~~~~~~~~~~~~~t~L~V~~~~~~~~~---P~v~~~~~-~~~l~C~~~g~~P~~~~v~W~~~-~~l~~~~~~~~~~~ 170 (207)
T 1ypz_E 96 SEGYELGTDKLVFGQGTQVTVEPKSQPPAK---PSVFIMKN-GTNVACLVKDFYPKEVTISLRSS-KKIVEFDPAIVISP 170 (207)
T ss_dssp CTTCCCCCCCCEECCCEEEEEECCCCCCCC---CEEEEEEE-TTEEEEEEEEESSSCCEEEEECS-SEEEECCCEEEECT
T ss_pred ccccccccceeeecCccEEEEccCCCCCCC---CeEEEeCC-CCeEEEEEeeEeCCCeEEEEecC-CcccCCccceEEcC
Confidence 123356777643222111 12233222 3699999987 454 79999999 6654332211 23
Q ss_pred eceEEEEcch
Q psy16425 142 FPFFKRTKKK 151 (163)
Q Consensus 142 ~~~l~i~~v~ 151 (163)
++.+.+....
T Consensus 171 ~g~y~~~~~~ 180 (207)
T 1ypz_E 171 SGKYSAVKLG 180 (207)
T ss_dssp TSSEEEEECE
T ss_pred CCcEEEEEee
Confidence 3556665443
No 217
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.49 E-value=1.6e-12 Score=96.76 Aligned_cols=126 Identities=20% Similarity=0.331 Sum_probs=81.3
Q ss_pred ceeEEEeeeeccC--CCEEEEEEcC-CceE---Eeee--e----eEEecCCeEEEEeCC-CceEEEEEcccCCCCCeEEE
Q psy16425 3 ARMLIEIGEMLMA--ESTVAWLRVD-TQTI---LTIQ--T----HVITKNHRIGVTHSE-TKAWYLHIREVRESDRGWYM 69 (163)
Q Consensus 3 ~~~~~~~~~~~~~--~~~i~W~k~~-~~~~---~~~~--~----~~~~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~ 69 (163)
..+.|.|...+.+ .+.|.||+.. +... .... . ......+|+.+..+. .++++|.|.+++.+|+|.|.
T Consensus 17 ~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 96 (475)
T 1iga_A 17 ASVKVSCKASGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYMGLSSLRPEDTAVYY 96 (475)
T ss_pred CCEEEEEEecCCCCCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCCCeEEEEECCCChhhCEEEE
Confidence 4688888877654 6789999953 2211 1110 0 011234677776553 35679999999999999999
Q ss_pred EEEEeCCC-------ceEeEEEEEEc----CCcccccCCCCcEEEeCCCcEEEEeEeccC-CC-C-eEEEEECCeE
Q psy16425 70 CQVNTDPM-------KSQVGYLEVVV----PPDILDYPTSTDMVIREGSNVTLKCAASGS-PK-P-NITWRREGGE 131 (163)
Q Consensus 70 C~~~~~~~-------~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-p-~v~W~~~~~~ 131 (163)
|.+.+... ....+.|.|.. +|.+...+. ..+.+|+.+.|.|.+.|. |. | .+.|++++..
T Consensus 97 C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~---~~~~~g~~v~L~C~~~g~~P~~p~~v~W~~~~~~ 169 (475)
T 1iga_A 97 CARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLSL---CSTQPDGNVVIACLVQGFFPQEPLSVTWSESGQG 169 (475)
T ss_pred EEEeccCCCccceeeecCceEEEeccCCCcCCeEEecCc---cccCCCCeEEEEEEEeeecCCCceEEEEcCCCcc
Confidence 99966531 12334566653 233332221 123689999999999986 65 5 8999998753
No 218
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.49 E-value=7.7e-13 Score=90.12 Aligned_cols=126 Identities=13% Similarity=0.272 Sum_probs=77.0
Q ss_pred ceeEEEeeeeccC----CCEEEEEEcCC-ce---EEeee-------e-e-EE--ecCCeEEEEeCC-CceEEEEEcccCC
Q psy16425 3 ARMLIEIGEMLMA----ESTVAWLRVDT-QT---ILTIQ-------T-H-VI--TKNHRIGVTHSE-TKAWYLHIREVRE 62 (163)
Q Consensus 3 ~~~~~~~~~~~~~----~~~i~W~k~~~-~~---~~~~~-------~-~-~~--~~~~r~~~~~~~-~~~~~L~i~~v~~ 62 (163)
..+.|.|...+.+ ...|.||+... .. +.... . . .. ...+|+.+..+. .+.++|.|.+++.
T Consensus 16 ~~v~L~C~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 95 (239)
T 3tv3_H 16 ETLSLTCAVSGDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTPKNLVFLKLNSVTA 95 (239)
T ss_dssp SCEEEEEEEESSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGGGTEEEEEECSCCG
T ss_pred CCEEEEEEEcCCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECCCCEEEEEECCCCh
Confidence 4688888877655 45899998532 11 11111 0 0 01 124678776543 4678899999999
Q ss_pred CCCeEEEEEEEeCC--------------CceEeEEEEEEc----CCcccccCCCCcEEEeCCCcEEEEeEecc-CCCC-e
Q psy16425 63 SDRGWYMCQVNTDP--------------MKSQVGYLEVVV----PPDILDYPTSTDMVIREGSNVTLKCAASG-SPKP-N 122 (163)
Q Consensus 63 ~d~G~Y~C~~~~~~--------------~~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p-~ 122 (163)
+|+|.|.|.+.+.. .......|.|.. .|.+...+. ...+..|+.+.|.|.+.+ .|.+ .
T Consensus 96 ~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~--~~~~~~g~~v~l~C~~~~~~p~~~~ 173 (239)
T 3tv3_H 96 ADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSASTKGPSVFPLAP--SSKSTSGGTAALGCLVKDYFPEPVT 173 (239)
T ss_dssp GGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCCCCBCCEEEEECC--CCCC--TTEEEEEEEEEEEBSSCCE
T ss_pred hhCEEEEEEEecCccccccccccccceeeeCCCcEEeeccCCCcCCEEEEECC--ChhhccCCcEEEEEEEeeEeCCCeE
Confidence 99999999995431 011223455542 233332222 223446999999999987 5544 4
Q ss_pred EEEEECCe
Q psy16425 123 ITWRREGG 130 (163)
Q Consensus 123 v~W~~~~~ 130 (163)
+.|++++.
T Consensus 174 v~W~~~g~ 181 (239)
T 3tv3_H 174 VSWNSGAL 181 (239)
T ss_dssp EEEGGGTB
T ss_pred EEEEECCc
Confidence 88999886
No 219
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.47 E-value=1.7e-13 Score=94.41 Aligned_cols=107 Identities=16% Similarity=0.185 Sum_probs=79.3
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEe-C-CCce-
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNT-D-PMKS- 79 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~-~-~~~~- 79 (163)
..+.|.|... |.+.|.| ++..+. ..+ ....|.|..+..+|.|.|+|.+.+ . +...
T Consensus 114 ~~v~l~C~~~--p~~~i~W---~g~~~~--------~~~---------~~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~ 171 (265)
T 2oz4_A 114 TEVTVKCEAH--PRAKVTL---NGVPAQ--------PLG---------PRAQLLLKATPEDNGRSFSCSATLEVAGQLIH 171 (265)
T ss_dssp CEEEEEEECC--TTSEEEE---SSCSSS--------CCS---------SEECCEEECCGGGTTEEEEEEEEEECSSSEEE
T ss_pred CcEEEEEEcc--CCCEEEE---CCEEcc--------CCC---------CcEEEEEccccccCCceEEEEEEcCCCCCccc
Confidence 3577788776 8899999 344431 011 123688999999999999999964 3 3333
Q ss_pred --EeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeE
Q psy16425 80 --QVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGE 131 (163)
Q Consensus 80 --~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~ 131 (163)
..+.|.|..+|.+..........+.+|+.+.|.|.+.|+|.|.+.|++++..
T Consensus 172 ~s~~~~l~V~~~p~~~~~~~p~~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~~~ 225 (265)
T 2oz4_A 172 KNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTF 225 (265)
T ss_dssp EEEEEEEEEEEEEECCGGGSCSEEEEETTCEECCCCCCEEESCCEEEEEETTTE
T ss_pred ccccEEEEEEeCCccccccCCCccEEcCCCeEEEEeECccCCCCeEEEEECCcc
Confidence 5567888888776554333456788999999999999999999999999984
No 220
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.47 E-value=1.7e-12 Score=89.05 Aligned_cols=126 Identities=14% Similarity=0.309 Sum_probs=75.8
Q ss_pred ceeEEEeeeec--cCCCEEEEEEcCC-ceEEee------ee---eEEecCCeEEEEeCC-CceEEEEEcccCCCCCeEEE
Q psy16425 3 ARMLIEIGEML--MAESTVAWLRVDT-QTILTI------QT---HVITKNHRIGVTHSE-TKAWYLHIREVRESDRGWYM 69 (163)
Q Consensus 3 ~~~~~~~~~~~--~~~~~i~W~k~~~-~~~~~~------~~---~~~~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~ 69 (163)
.++.|.|...+ .+...|.||+... ...... +. ......+|+.+..+. .++++|.|.+++.+|+|.|.
T Consensus 15 ~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~ 94 (248)
T 3u2s_H 15 SSLRLSCAASGFDFSRQGMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRDNSKDTLYLQMNSLRVEDTATYF 94 (248)
T ss_dssp CCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEE
T ss_pred CCEEEEEEeccccCCccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCCCHHHCEEEE
Confidence 46888888754 4567899998542 211111 00 001234788876654 46789999999999999999
Q ss_pred EEEEeCC-----------------------CceEeEEEEEEc----CCcccccCCCCcEEEeCCCcEEEEeEecc-CC-C
Q psy16425 70 CQVNTDP-----------------------MKSQVGYLEVVV----PPDILDYPTSTDMVIREGSNVTLKCAASG-SP-K 120 (163)
Q Consensus 70 C~~~~~~-----------------------~~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p-~ 120 (163)
|.+.+.. .......+.|.. .|.+...+. ...+..|+.+.|.|.+.+ .| .
T Consensus 95 C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~--~~~~~~g~~~~L~C~~~~~~P~~ 172 (248)
T 3u2s_H 95 CVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSSASTKGPSVFPLAP--SSKSTSGGTAALGCLVKDYFPEP 172 (248)
T ss_dssp EEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECSCCCBCCEEEEECC--C------CEEEEEEEEEEEBSSC
T ss_pred EEEeCCCCccccccccccccccccccccceeeCCCEEEEEcccCCCCCEEEEeCC--CccccCCCcEEEEEEEeeEECCC
Confidence 9996421 112234555552 233332221 223456999999999987 55 4
Q ss_pred CeEEEEECCe
Q psy16425 121 PNITWRREGG 130 (163)
Q Consensus 121 p~v~W~~~~~ 130 (163)
+.+.|++++.
T Consensus 173 ~~v~W~~~g~ 182 (248)
T 3u2s_H 173 VTVSWNSGAL 182 (248)
T ss_dssp CEEEEGGGTB
T ss_pred eEEEEeECCc
Confidence 5799999885
No 221
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.46 E-value=9.4e-14 Score=102.13 Aligned_cols=150 Identities=17% Similarity=0.242 Sum_probs=93.3
Q ss_pred ceeEEEeeeecc--CCCEEEEEEcC-CceEEeeee---------eEEecCCeEEEEeCC-CceEEEEEcccCCCCCeEEE
Q psy16425 3 ARMLIEIGEMLM--AESTVAWLRVD-TQTILTIQT---------HVITKNHRIGVTHSE-TKAWYLHIREVRESDRGWYM 69 (163)
Q Consensus 3 ~~~~~~~~~~~~--~~~~i~W~k~~-~~~~~~~~~---------~~~~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~ 69 (163)
..+.|.|...+. +.+.|.||+.+ +........ ......+|+.+..+. .++++|.|.+++.+|+|.|.
T Consensus 15 ~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 94 (434)
T 1igy_B 15 ASVKMSCKASGYTFTTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNTANIHLSSLTSDDSAVYY 94 (434)
T ss_dssp CCEEECCEECSSCGGGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCBBCEEECSBCGGGCSEEC
T ss_pred CCEEEEEEccCCcccCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCEEEEEECCCChHHCEEEE
Confidence 468888888765 37789999964 222211000 001124677765542 24568999999999999999
Q ss_pred EEEEeC-CCceEeEEEEEEc----CCcccccCCCCcEEEeCCCcEEEEeEeccC-CCC-eEEEEECCeEEE--e-----c
Q psy16425 70 CQVNTD-PMKSQVGYLEVVV----PPDILDYPTSTDMVIREGSNVTLKCAASGS-PKP-NITWRREGGELI--A-----Q 135 (163)
Q Consensus 70 C~~~~~-~~~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p-~v~W~~~~~~~~--~-----~ 135 (163)
|.+.+. ......+.|.|.. +|.+...+. ...+.+|+.+.|.|.+.|. |.| .+.|++++..+. . .
T Consensus 95 C~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~--~~~~~~G~~v~L~C~~~g~~P~p~~v~W~k~~~~~~~~~~~~~~~ 172 (434)
T 1igy_B 95 CVREGEVPYWGQGTTVTVSSAKTTPPSVYPLAP--GSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQ 172 (434)
T ss_dssp CCCSSSSCCCCCCEECEECCSCCBCCCEEEECC--CCCCCCTTEEEEEEEEEEEBSSCCEEEETTTTBCSSEEECCCEEC
T ss_pred EEEEccccccCCceEEEEccCCCCCCeEEEcCC--ccccCCCCcEEEEEEEeeecCCCeEEEEeeCCcCCCeEecCceec
Confidence 999654 2233445666653 343332222 1234689999999999885 776 999999987421 0 0
Q ss_pred CCceEEeceEEEEcchhhh
Q psy16425 136 GNGQEDFPFFKRTKKKKKK 154 (163)
Q Consensus 136 ~~~~~~~~~l~i~~v~~~~ 154 (163)
.......+.|+|.++..+|
T Consensus 173 ~~~~~~~s~L~i~~~~~~d 191 (434)
T 1igy_B 173 SDLYTLSSSVTVPSSPRPS 191 (434)
T ss_dssp SSCEEEEEEEEEETTTTTS
T ss_pred CCcEEEEEEEEEcchhcCC
Confidence 0111223568888887665
No 222
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.46 E-value=6.1e-13 Score=90.23 Aligned_cols=122 Identities=18% Similarity=0.230 Sum_probs=73.9
Q ss_pred ceeEEEeeeecc-CC-C-EEEEEEcCCceE-EeeeeeE-EecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCC
Q psy16425 3 ARMLIEIGEMLM-AE-S-TVAWLRVDTQTI-LTIQTHV-ITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPM 77 (163)
Q Consensus 3 ~~~~~~~~~~~~-~~-~-~i~W~k~~~~~~-~~~~~~~-~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~ 77 (163)
..+.|.|...+. |. + .|.|++ ++..+ ....... ...++.+.. ...|.|.+++.+|+|.|+|.+.+...
T Consensus 29 ~~v~L~C~~~g~~P~~p~~v~W~~-~g~~~~~~~~~~~~~~~~g~~~~------~s~L~I~~~~~~D~g~Y~C~~~~~~~ 101 (231)
T 2w59_A 29 LDAKLRCLVVNLPSDSSLSVTWTR-EKSGNLRPDPMVLQEHFNGTYSA------SSAVPVSTQDWLSGERFTCTVQHEEL 101 (231)
T ss_dssp CCCEEEEEEEEESCCTTCEEEEEC-SSSSCCCCCCCEEEECTTSCEEE------EEEEECCHHHHHTTCCEEEEEECTTC
T ss_pred CceEEEEEEeCccCCCCeEEEEEc-CCeeccccccccceECCCCcEEE------EEEEEecchhccCCCEEEEEEEcCCC
Confidence 367888888774 53 4 999998 55444 1111110 112233321 23799999999999999999976532
Q ss_pred ceEeEEEEEE------cCCcccccCCCCcEEEeCCCcEEEEeEeccC-C-CCeEEEEECCeEEEe
Q psy16425 78 KSQVGYLEVV------VPPDILDYPTSTDMVIREGSNVTLKCAASGS-P-KPNITWRREGGELIA 134 (163)
Q Consensus 78 ~~~~~~l~v~------~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p-~p~v~W~~~~~~~~~ 134 (163)
.....+.+. .+|.+...+.... . ..|+.+.|.|.+.|. | .+.+.|+++|..+..
T Consensus 102 -~~~~~~~v~~~~~~~~~P~v~v~~~~~~-~-~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~ 163 (231)
T 2w59_A 102 -PLPLSKSVYRNTGPTTPPLIYPFAPHPE-E-LSLSRVTLSCLVRGFRPRDIEIRWLRDHRAVPA 163 (231)
T ss_dssp -SSCEEEEECCCCSCCBCCEEEEECCCGG-G-GGSSEEEEEEEEEEEBSSCCEEEEEETTEECCG
T ss_pred -CCceEEEEecCCCCCcCCEEEEeCCCHH-H-hccCceEEEEEEEeccCCCcEEEEEECCEECCC
Confidence 223334443 2343332221111 1 235679999999985 5 368999999988744
No 223
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.45 E-value=1.5e-12 Score=77.73 Aligned_cols=87 Identities=21% Similarity=0.376 Sum_probs=64.0
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCceEeE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKSQVG 82 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~ 82 (163)
..+.|.|...+.|.+.|.|++.+...+. ..........|+.+......+.+|.|.+++.+|+|.|+|.+.+.+.....+
T Consensus 22 ~~v~L~C~~~~~~~~~v~W~~~~~~~~~-~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~ 100 (108)
T 3m45_A 22 GTAILTCRVDQNDNTSLQWSNPAQQTLY-FDDKKALRDNRIELVRASWHELSISVSDVSLSDEGQYTCSLFTMPVKTSKA 100 (108)
T ss_dssp SCEEEEEEESSCSSCCEEEECTTCCEEE-ETTEECSCCTTEEEEEESSSEEEEEECSCCGGGCEEEEEEECSSSCEEEEE
T ss_pred CcEEEEeEEcCCCccEEEEEcCCCceEE-EcCCcccccCcEEEeecCCCcEEEEECCCChhHCeEEEEEEEcCCCcEEEE
Confidence 4688999999999999999995432332 222223345677776555567799999999999999999997755556667
Q ss_pred EEEEEcCC
Q psy16425 83 YLEVVVPP 90 (163)
Q Consensus 83 ~l~v~~~p 90 (163)
.|.|..+|
T Consensus 101 ~L~V~~~P 108 (108)
T 3m45_A 101 YLTVLGVP 108 (108)
T ss_dssp EEEEECCC
T ss_pred EEEEEcCC
Confidence 78777654
No 224
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.45 E-value=3.1e-12 Score=86.55 Aligned_cols=148 Identities=16% Similarity=0.253 Sum_probs=87.2
Q ss_pred ceeEEEeeeec--cCCCEEEEEEcCC-ceEE---eee------eeEEecCCeEEEEeCC-CceEEEEEcccCCCCCeEEE
Q psy16425 3 ARMLIEIGEML--MAESTVAWLRVDT-QTIL---TIQ------THVITKNHRIGVTHSE-TKAWYLHIREVRESDRGWYM 69 (163)
Q Consensus 3 ~~~~~~~~~~~--~~~~~i~W~k~~~-~~~~---~~~------~~~~~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~ 69 (163)
.++.|.|...+ .....|.||+... .... ... .......+|+.+..+. .++++|.|.+++.+|+|.|.
T Consensus 16 ~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~ 95 (230)
T 3n9g_H 16 ASTKVSCKASGYTFTHYYMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRDTSTSTVYMELSSLRSEDTAVYY 95 (230)
T ss_dssp CCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEE
T ss_pred CCEEEEEEeecceecCcEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCCChhhCEEEE
Confidence 46888888754 4567899998532 1111 110 0011235688877655 46788999999999999999
Q ss_pred EEEEeCC---------CceEeEEEEEEc----CCcccccCCCCcEEEeCCCcEEEEeEecc-CC-CCeEEEEECCeEEEe
Q psy16425 70 CQVNTDP---------MKSQVGYLEVVV----PPDILDYPTSTDMVIREGSNVTLKCAASG-SP-KPNITWRREGGELIA 134 (163)
Q Consensus 70 C~~~~~~---------~~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p-~p~v~W~~~~~~~~~ 134 (163)
|.+.+.. .......|.|.. +|.+...+. ...+.+|+.+.|.|.+.+ .| .+.+.| ++..+..
T Consensus 96 C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~--~~~~~~g~~v~L~C~~~~~~P~~~~v~W--~~~~~~~ 171 (230)
T 3n9g_H 96 CARDWGSNYVWGSYPKYWGQGTLVTVSSASTKGPSVFPLAP--SSKSTSGGTAALGCLVKDYFPEPVTVSW--NSGALTS 171 (230)
T ss_dssp EEEECCCSSSTTCCEEEECCCEEEEECSSCCBCCEEEEECC--CCCCCTTCEEEEEEEEEEEBSSCCEEEE--GGGTBCT
T ss_pred EEEccCCCCcccccccccCCCEEEEEEecCCCCCEEEecCC--CccccCCCCEEEEEEEEeEECCCEEEEE--CCcccCC
Confidence 9996532 112334566642 233332221 222457999999999987 45 346999 5443311
Q ss_pred ----------cCCceEEeceEEEEcchhhh
Q psy16425 135 ----------QGNGQEDFPFFKRTKKKKKK 154 (163)
Q Consensus 135 ----------~~~~~~~~~~l~i~~v~~~~ 154 (163)
.+........|+|..+..+|
T Consensus 172 ~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~ 201 (230)
T 3n9g_H 172 GVHTFPAVLQSSGLYSLSSVVTVPSSSLGT 201 (230)
T ss_dssp TEEECCCEECTTSCEEEEEEEEEESTTBTT
T ss_pred CeEeCCceECCCCCEEEEEEEEECHHHcCC
Confidence 01111122467777776655
No 225
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.45 E-value=1.5e-13 Score=101.23 Aligned_cols=145 Identities=10% Similarity=0.079 Sum_probs=86.8
Q ss_pred eeEEEeeeecc-CCC-EEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCc-eE
Q psy16425 4 RMLIEIGEMLM-AES-TVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMK-SQ 80 (163)
Q Consensus 4 ~~~~~~~~~~~-~~~-~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~-~~ 80 (163)
.+.|.|...+. |.+ .|.|++.+ ..+...........+.+... ..|.|.++..+| |.|+|.+.+.... ..
T Consensus 140 ~v~L~C~~~g~~P~p~~v~W~~~~-~~~~~~~~~~~~~~~~~~~~------s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~ 211 (444)
T 1igt_B 140 SVTLGCLVKGYFPEPVTLTWNSGS-LSSGVHTFPAVLQSDLYTLS------SSVTVTSSTWPS-QSITCNVAHPASSTKV 211 (444)
T ss_dssp CEEEEEEEEEEBSSCCEEEEGGGT-BCTTEEECCCEEETTEEEEE------EEEEECSTTTTT-SCCEEEEEETTTTEEE
T ss_pred cEEEEEEEcceeCCCcEEEEecCC-CCCCeEecCccccCCcEEEE------EEEEEchhhcCC-CeEEEEEEeCCCCcce
Confidence 57788888774 666 99999954 33110000000111333322 279999999999 9999999776432 22
Q ss_pred eEEEEE------------------EcCCcccccCCCCcEEEeCCCcEEEEeEeccCC----CCeEEEEECCeEEEecCCc
Q psy16425 81 VGYLEV------------------VVPPDILDYPTSTDMVIREGSNVTLKCAASGSP----KPNITWRREGGELIAQGNG 138 (163)
Q Consensus 81 ~~~l~v------------------~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p----~p~v~W~~~~~~~~~~~~~ 138 (163)
...+.+ ..+|.+...++.....+.+|+++.|.|.+.|.| .+.+.|++++..+......
T Consensus 212 ~~~i~~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~ 291 (444)
T 1igt_B 212 DKKIEPRGPTIKPCPPCKCPAPNLLGGPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQ 291 (444)
T ss_dssp EEECCCCCCSCCCCCCCSCCCSCCCCCCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTCB
T ss_pred EEEeccCCCCcccCCccccCCcccCCCceEEecCCchhheeecCCCcEEEEEEeecccCCCCeEEEEEECCccccCcccc
Confidence 223322 113333122221111147899999999999874 3589999999876432211
Q ss_pred e---------EEeceEEEEcchhhhHh
Q psy16425 139 Q---------EDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 139 ~---------~~~~~l~i~~v~~~~~~ 156 (163)
. ...+.|.|.++..+|.+
T Consensus 292 ~~~~~~~~~~~~~~~L~I~~v~~~d~G 318 (444)
T 1igt_B 292 THREDYNSTLRVVSALPIQHQDWMSGK 318 (444)
T ss_dssp CCEEECSSSEEEEEEEECCHHHHHTTC
T ss_pred cceeCCCCcEEEEEEEEEcHHHhccCC
Confidence 1 23357999999988865
No 226
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.44 E-value=2.6e-13 Score=92.65 Aligned_cols=122 Identities=16% Similarity=0.198 Sum_probs=74.7
Q ss_pred ceeEEEeeeecc---CCC-EEEEEEcCCceEEeeee--eEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCC
Q psy16425 3 ARMLIEIGEMLM---AES-TVAWLRVDTQTILTIQT--HVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDP 76 (163)
Q Consensus 3 ~~~~~~~~~~~~---~~~-~i~W~k~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~ 76 (163)
.++.|.|...+. |.+ .|.||+.+ ..+..... ......+++. ....|.|.+++.+|+|.|+|.+.+..
T Consensus 33 ~~v~L~C~~~g~~~~P~~~~v~W~k~~-~~~~~~~~~~~~~~~~~~~~------~~s~L~I~~~~~~D~g~Y~C~~~~~~ 105 (239)
T 1i1c_A 33 LTPKVTCVVVDISQNDPEVRFSWFIDD-VEVHTAQTHAPEKQSNSTLR------SVSELPIVERDWLNGKTFKCKVNSGA 105 (239)
T ss_dssp SCCEEEEEEEEECTTCCCCEEEEEESS-CEECCCEECCCEECTTSCEE------EEEEEECCHHHHHTTCCEEEEEECSS
T ss_pred CcEEEEEEEecCccCCCCCEEEEEECC-ccccCcccccceEcCCCcEE------EEEEEEEEhhHccCCCeEEEEEeccc
Confidence 367888888776 665 89999954 33321110 0001112222 22479999999999999999997653
Q ss_pred Cc-eEeEEE----EEEcCCcccccCCCCcEEEeCCCcEEEEeEecc-CCC-CeEEEEECCeEEE
Q psy16425 77 MK-SQVGYL----EVVVPPDILDYPTSTDMVIREGSNVTLKCAASG-SPK-PNITWRREGGELI 133 (163)
Q Consensus 77 ~~-~~~~~l----~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~-p~v~W~~~~~~~~ 133 (163)
.. .....+ .+..+|.+...+... ....|+.+.|.|.+.| +|+ +.+.|+++|..+.
T Consensus 106 ~~~~~~~~v~~~~~~~~~P~v~v~~~~~--~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~ 167 (239)
T 1i1c_A 106 FPAPIEKSISKPEGTPRGPQVYTMAPPK--EEMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQE 167 (239)
T ss_dssp SSSCEEEEECCCSSCCBCCEEEEECCCG--GGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECS
T ss_pred CCCCcEEEEecCCCCCcCCEEEEECCCh--HHhcCCcEEEEEEEeeeECCCeEEEEEECCEECC
Confidence 32 122222 223455544333211 1234788999999998 555 4799999998763
No 227
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.43 E-value=2.2e-12 Score=88.82 Aligned_cols=128 Identities=16% Similarity=0.149 Sum_probs=82.3
Q ss_pred ceeEEEeeeec-cCCC--EEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEccc---CCCCCeE--EEEEEEe
Q psy16425 3 ARMLIEIGEML-MAES--TVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREV---RESDRGW--YMCQVNT 74 (163)
Q Consensus 3 ~~~~~~~~~~~-~~~~--~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v---~~~d~G~--Y~C~~~~ 74 (163)
..+.|.|...+ .|.+ .|.|++ ++..+.. ++ ...+. .+.+..+ +.+|+|. |+|.+.+
T Consensus 19 ~~v~l~C~~~g~~p~p~~~v~W~k-~~~~l~~----------~~--~~~~~---~~~~~~~~~~~~~d~g~g~Y~C~a~n 82 (265)
T 2oz4_A 19 TQGTVVCSLDGLFPVSEAQVHLAL-GDQRLNP----------TV--TYGND---SFSAKASVSVTAEDEGTQRLTCAVIL 82 (265)
T ss_dssp EEEEEEEEEESCSCGGGCEEEEEE-TTEECCC----------EE--EECSS---EEEEEEEEEECGGGCEEEEEEEEEEE
T ss_pred CCEEEEEEccCCCCCcceEEEEEe-CCEECCc----------eE--eeCCC---eEEEEeecccccccCCcceEEEEEec
Confidence 46788898887 6666 999999 5544321 11 11111 3444444 7888885 9999977
Q ss_pred C-CCceEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceEEeceEEEEcchhh
Q psy16425 75 D-PMKSQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQEDFPFFKRTKKKKK 153 (163)
Q Consensus 75 ~-~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~l~i~~v~~~ 153 (163)
. +.....+.|.|...|...... ....+.+|+.+.|.|.+. |.|.+.| +|..+... ...+.|.|..+..+
T Consensus 83 ~~~~~~~~~~l~V~~~p~p~~~~--~~~~v~~G~~v~l~C~~~--p~~~i~W--~g~~~~~~----~~~~~l~i~~~~~~ 152 (265)
T 2oz4_A 83 GNQSQETLQTVTIYSFPAPNVIL--TKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQPL----GPRAQLLLKATPED 152 (265)
T ss_dssp TTEEEEEEEEEEEECCCCCEEEE--SCSEEETTCEEEEEEECC--TTSEEEE--SSCSSSCC----SSEECCEEECCGGG
T ss_pred CCCCcEEEEEEEEeCCCCceeec--CCceecCCCcEEEEEEcc--CCCEEEE--CCEEccCC----CCcEEEEEcccccc
Confidence 6 444556778887644322222 244577899999999998 8999999 76665211 12245667777666
Q ss_pred hHh
Q psy16425 154 KKK 156 (163)
Q Consensus 154 ~~~ 156 (163)
|.+
T Consensus 153 ~~g 155 (265)
T 2oz4_A 153 NGR 155 (265)
T ss_dssp TTE
T ss_pred CCc
Confidence 654
No 228
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.43 E-value=1.4e-12 Score=80.13 Aligned_cols=91 Identities=18% Similarity=0.228 Sum_probs=63.2
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCceEeE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKSQVG 82 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~ 82 (163)
..+.|.|...+.|.+.|.|++.++..+.. ........+|+.+.......++|.|.+++.+|+|.|+|.+.+.+.....+
T Consensus 17 ~~v~L~C~~~~~p~~~v~W~~~~~~~~~~-~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~g~~~~~~ 95 (124)
T 3rbg_A 17 QTLTLKCVTSLRKNSSLQWLTPSGFTIFL-NEYPVLKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCLHYSDSVSTKEV 95 (124)
T ss_dssp SCEEEEEECCCCTTCEEEEECTTSCEEEE-TTEECSCSSCCEEEEEETTEEEEEESSCCGGGCEEEEEEEESSSEEEEEE
T ss_pred CCEEEEeEEeccCCCEEEEECCCCeEEEE-eccccccCCcEEEEeCCCCEEEEEECCCChHHCEEEEEEEEcCCCCcEEE
Confidence 46889999999999999999855444322 22222345566665444456799999999999999999997765556677
Q ss_pred EEEEEcCCcccc
Q psy16425 83 YLEVVVPPDILD 94 (163)
Q Consensus 83 ~l~v~~~p~~~~ 94 (163)
.|.|..+|....
T Consensus 96 ~l~V~~~P~~~~ 107 (124)
T 3rbg_A 96 KVIVLATMKGEF 107 (124)
T ss_dssp EEEEECC-----
T ss_pred EEEEEeCCCCCc
Confidence 888888776443
No 229
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.43 E-value=6.4e-13 Score=95.79 Aligned_cols=98 Identities=20% Similarity=0.262 Sum_probs=53.5
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.+.|...+ |.+.|.|++.++..+... ....|+.+ ..+ +|.|.+++.+|+|.|+|.+.+. +.....
T Consensus 262 ~~~~l~C~~~g-p~p~i~W~~~~~~~~~~~-----~~~~r~~~-~~~----~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~ 330 (361)
T 2xot_A 262 DTLTIRCDTKQ-QGMTKVWVSPSNEQVLSQ-----GSNGSVSV-RNG----DLFFKKVQVEDGGVYTCYAMGETFNETLS 330 (361)
T ss_dssp CCEEECCCCSS-TTCEEEEECTTSCBCCSC-----CSSSSEEE-ETT----EEEESSCCTTSCEEEEEEEECSSCEEEEE
T ss_pred CeEEEEeEeeC-CCCeEEEEeCCCeeEeec-----ccCCceEe-ecC----eEEEeecCcccCEEEEEEEecCCCccEEE
Confidence 36788898888 999999999554432110 12335666 444 8999999999999999999776 333444
Q ss_pred EEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEE
Q psy16425 82 GYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNIT 124 (163)
Q Consensus 82 ~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~ 124 (163)
+.+.|...+ .+|+.+.|.|.+.|.|.|.|.
T Consensus 331 ~~l~V~~~~-------------~~g~~~~l~C~~~g~P~P~i~ 360 (361)
T 2xot_A 331 VELKVYNFT-------------LHGHHDTLNAAADPWSHPQFE 360 (361)
T ss_dssp EEEEEESSC-------------CC-------------------
T ss_pred EEEEEEeee-------------ccCCceEEEEEeCCCCCCccc
Confidence 555553321 458899999999999998763
No 230
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.43 E-value=1.4e-12 Score=86.94 Aligned_cols=122 Identities=16% Similarity=0.221 Sum_probs=68.2
Q ss_pred ceeEEEeeeeccC----CCEEEEEEcCCceEEeeee--eEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCC
Q psy16425 3 ARMLIEIGEMLMA----ESTVAWLRVDTQTILTIQT--HVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDP 76 (163)
Q Consensus 3 ~~~~~~~~~~~~~----~~~i~W~k~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~ 76 (163)
.++.|.|...+.+ .+.|.|++ ++..+..... ......+.+.+.. .|.|......|+|.|+|.+.+..
T Consensus 19 ~~v~L~C~~~g~~p~~~~~~v~W~k-~~~~~~~~~~~~~~~~~~g~~~~~~------~l~i~~~d~~d~g~Y~C~a~n~~ 91 (207)
T 1l6x_A 19 RTPEVTCVVVDVSHEDPEVKFNWYV-DGVEVHNAKTKPREEQYNSTYRVVS------VLTVLHQDWLNGKEYKCKVSNKA 91 (207)
T ss_dssp SCCEEEEEEEEECSSSCCCEEEEEE-TTEEECCCEECCCEECTTSCEEEEE------EEECCHHHHHTTCCEEEEEECTT
T ss_pred CceEEEEEEecccCCCCCeEEEEEE-CCccccCcccCCceeccCCcEEEEE------EEEEEHHHccCCceEEEEEEcCc
Confidence 4678888887764 35999999 5544421110 0001112221111 34444444555999999997663
Q ss_pred Cce-EeEEE----EEEcCCcccccCCCCcEEEeCCCcEEEEeEeccC-CC-CeEEEEECCeEEE
Q psy16425 77 MKS-QVGYL----EVVVPPDILDYPTSTDMVIREGSNVTLKCAASGS-PK-PNITWRREGGELI 133 (163)
Q Consensus 77 ~~~-~~~~l----~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-p~v~W~~~~~~~~ 133 (163)
... ....+ .+..+|.+...+.. .. ...|+.+.|.|.+.|. |+ +.+.|+++|..+.
T Consensus 92 ~~~~~~~~v~~~~~~~~~P~v~~~~~~-~~-~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~ 153 (207)
T 1l6x_A 92 LPAPIEKTISKAKGQPREPQVYTLPPS-RD-ELTKNQVSLTCLVKGFYPSDIAVEWESNGQPEN 153 (207)
T ss_dssp SSSCEEEEECCCCSCCBCCEEEEECCC-GG-GGGSSEEEEEEEEEEEBSSCCEEEEEETTEEEC
T ss_pred CCcceEEEeccCCCCCcCCEEEEECCC-hH-HhcCCcEEEEEEEeCeECCCeEEEEEECCeecc
Confidence 322 22233 22344554433221 11 1246669999999984 54 3899999998764
No 231
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.42 E-value=1.1e-12 Score=92.92 Aligned_cols=144 Identities=11% Similarity=0.090 Sum_probs=85.8
Q ss_pred eeEEEeeeecc-C-CCEEEEEEcCCceEEeeee--eEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCce
Q psy16425 4 RMLIEIGEMLM-A-ESTVAWLRVDTQTILTIQT--HVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKS 79 (163)
Q Consensus 4 ~~~~~~~~~~~-~-~~~i~W~k~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~ 79 (163)
.+.|.|...+. | .+.|.|++ ++..+..... .....++++... ..|.|.++...|+|.|+|.+.+... .
T Consensus 26 ~v~L~C~~~g~~P~~~~v~W~k-~g~~l~~~~~~~~~~~~~g~~~~~------s~l~i~~~~~~d~g~Y~C~a~n~~~-~ 97 (323)
T 2wqr_A 26 TIQLLCLVSGYTPGTIQITWLE-DGQVMDVDLSTASTTQEGELASTQ------SELTLSQKHWLSDRTYTCQVTYQGH-T 97 (323)
T ss_dssp EEEEEEEEEEECCCCEEEEEEE-TTEECCGGGEEEEEEEETTEEEEE------EEEEEEHHHHHTTCCEEEEEEETTE-E
T ss_pred cEEEEEEEeCeECCCeEEEEEE-CCEEcccceecCCcCccCCcEEEE------EEEEEcHHHcCCCCcEEEEEEeCCC-C
Confidence 67888888775 3 57999999 5555421100 011113333322 2688998888999999999977532 2
Q ss_pred EeEEEEEE-----cCCcccccCCCCcEEEeCCCcEEEEeEeccC-CCC---eEEEEECCeEEEecCC---------ceEE
Q psy16425 80 QVGYLEVV-----VPPDILDYPTSTDMVIREGSNVTLKCAASGS-PKP---NITWRREGGELIAQGN---------GQED 141 (163)
Q Consensus 80 ~~~~l~v~-----~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p---~v~W~~~~~~~~~~~~---------~~~~ 141 (163)
....+.+. ..|.+...++ ....+.+|+++.|.|.+.+. |.| .+.|+++++.+..... ....
T Consensus 98 ~~~~~~~~~~~~~~~p~v~~~~p-~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~~ 176 (323)
T 2wqr_A 98 FEDSTKKCADSNPRGVSAYLSRP-SPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLTV 176 (323)
T ss_dssp EEEEECCCCCSSGGGCEEEECCC-CHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEEECTTSCEEE
T ss_pred cceeeecCCCCCCCCCEEEEcCC-CHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCccCCCCCEEE
Confidence 22222210 1222222121 12346689999999999875 566 8999997543322111 1123
Q ss_pred eceEEEEcchhhhHh
Q psy16425 142 FPFFKRTKKKKKKKK 156 (163)
Q Consensus 142 ~~~l~i~~v~~~~~~ 156 (163)
.+.|+|.++..+|.+
T Consensus 177 ~~~L~I~~~~~~D~G 191 (323)
T 2wqr_A 177 TSTLPVGTRDWIEGE 191 (323)
T ss_dssp EEEEECCHHHHHTTC
T ss_pred EEEEEECHHHccCCC
Confidence 457899999988865
No 232
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.42 E-value=9.7e-14 Score=96.59 Aligned_cols=133 Identities=16% Similarity=0.146 Sum_probs=87.4
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.|.|...+. |.|++.. ... ..... .....+|.|.+++.+|+|.|+|.+.+. +.....
T Consensus 20 ~~v~L~C~~~~~----v~W~~~~-~~~-------------~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~ 80 (292)
T 4dkd_C 20 ATVTLRCVGNGS----VEWDGPP-SPH-------------WTLYS-DGSSSILSTNNATFQNTGTYRCTEPGDPLGGSAA 80 (292)
T ss_dssp CCEEEEEECSSC----CCBCCCC-CSS-------------CEECC-BTTEEEEEESSCCGGGCSCEEECCCC----CCEE
T ss_pred CcEEEEEcCCCc----eEEccCC-CCc-------------eEEec-cCceEEEEEcccccccCEEEEEEEccCCCCcceE
Confidence 467888877663 8899632 211 11111 112348999999999999999999654 444666
Q ss_pred EEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCC--CeEEEEECCeEEEecCC-ce-EEeceEEEEcchhhhHh
Q psy16425 82 GYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPK--PNITWRREGGELIAQGN-GQ-EDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 82 ~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~--p~v~W~~~~~~~~~~~~-~~-~~~~~l~i~~v~~~~~~ 156 (163)
+.|.|..+|....... ....+.+|+++.|.|.+.+ |. +.+.|+++++....... .. ...+.|.|.+++.+|.+
T Consensus 81 ~~l~V~~~~~~~~~~~-~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 157 (292)
T 4dkd_C 81 IHLYVKDPARPWNVLA-QEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMRHTNYSFSPWHGFTIHRAKFIQSQ 157 (292)
T ss_dssp ECCEECCSSCCEEESC-SEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCSSCCEECCSSSCCEETTCCGGGCS
T ss_pred EEEEEcCccccccccC-CeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCccccCCcccccCCceEEECCCCHHHCe
Confidence 6777777665432222 3677889999999999987 54 78999998544332222 21 13345899999888875
No 233
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.42 E-value=2.1e-13 Score=94.87 Aligned_cols=131 Identities=13% Similarity=0.134 Sum_probs=82.9
Q ss_pred ceeEEEeeeeccCCCEEEEEEcC-CceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCce--
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVD-TQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKS-- 79 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~-- 79 (163)
..+.|.|... .|.+.+.|++.+ +..+. .. .... . .+. ...|+|.|+|.+.+.....
T Consensus 111 ~~v~l~C~~~-~p~~~v~w~~~~~~~~~~----------~~--~~~~---~-~~~----~~~d~G~Y~C~a~n~~~~~~s 169 (289)
T 3mjg_X 111 TEITIPCRVT-DPQLVVTLHEKKGDVALP----------VP--YDHQ---R-GFS----GIFEDRSYICKTTIGDREVDS 169 (289)
T ss_dssp CCEEECCCBS-CTTSCEEEEESSCCSCCC----------CC--EETT---T-EEE----ECCCSSEEEEEEEETTEEEEC
T ss_pred CeEEEEeEcC-CCCceEEEEeCCCCCccc----------ee--ecCC---c-Cee----eeccCcEEEEEEEeCCceeee
Confidence 3577788877 778899999954 22221 00 0000 0 111 3679999999997653322
Q ss_pred EeEEEEEEc--CCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCC---------ceEEeceEEEE
Q psy16425 80 QVGYLEVVV--PPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGN---------GQEDFPFFKRT 148 (163)
Q Consensus 80 ~~~~l~v~~--~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~---------~~~~~~~l~i~ 148 (163)
....+.+.. +|.+...+. ...+.+|+++.|.|.+.+.|.|.+.|++++........ .......|.|.
T Consensus 170 ~~~~l~v~~~~~p~i~~~~~--~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~ 247 (289)
T 3mjg_X 170 DAYYVYRLQVSSINVSVNAV--QTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIP 247 (289)
T ss_dssp CCEEEEECCCCCCCCEEEES--CSEEETTSCEEEEEEEESCSSBEEEEECTTSSSSCCCCCEEEESCTTTTEEEEEEEES
T ss_pred eeEEEEecCCCCCCcEEeCC--cceeEcCCCEEEEEEECCCCCcceEEEcCCccCCCcccccccccCCcceEEEEEEEEc
Confidence 233455554 444444332 35688999999999999999999999976543211111 12345789999
Q ss_pred cchhhhHh
Q psy16425 149 KKKKKKKK 156 (163)
Q Consensus 149 ~v~~~~~~ 156 (163)
+++.+|.+
T Consensus 248 ~v~~~D~G 255 (289)
T 3mjg_X 248 SAELEDSG 255 (289)
T ss_dssp SCCSSCCE
T ss_pred ccChhhCc
Confidence 99998875
No 234
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.40 E-value=3.4e-12 Score=77.58 Aligned_cols=82 Identities=20% Similarity=0.371 Sum_probs=62.0
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.|.|...+.|.+.|.|++ ++..+. ....++.+.....+..+|.|.+++.+|+|.|+|.+.|. +.....
T Consensus 31 ~~v~L~C~~~g~p~p~v~W~k-~~~~~~-------~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~ 102 (116)
T 2kkq_A 31 DSVKLECQISAIPPPKLFWKR-NNEMVQ-------FNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSAVNEAGVTTCN 102 (116)
T ss_dssp EEEEEEEEBCCBSCCEEEEEE-TTEECC-------CCBTTEEEEECTTCEEEEEEEEECGGGCEEEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEeccCCCEEEEEE-CCEECc-------CCCCeEEEEeCCCCeEEEEECCCCcccCEEEEEEEEcCCCeEEEE
Confidence 468899999999999999999 554432 12356666666556678999999999999999999776 444556
Q ss_pred EEEEEEcCCcc
Q psy16425 82 GYLEVVVPPDI 92 (163)
Q Consensus 82 ~~l~v~~~p~~ 92 (163)
+.|.|..+|..
T Consensus 103 ~~l~V~~~p~~ 113 (116)
T 2kkq_A 103 TRLDVTARPNQ 113 (116)
T ss_dssp EEEEEECCSCC
T ss_pred EEEEEeCCCCC
Confidence 67777776643
No 235
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.40 E-value=2.1e-12 Score=78.57 Aligned_cols=92 Identities=22% Similarity=0.271 Sum_probs=64.2
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.|.|...+.|.+.|.|++ ++..+. ....++.....+ +|.|.+++.+|+|.|+|.+.|. +.....
T Consensus 24 ~~v~l~C~~~g~p~p~i~W~k-~g~~~~-------~~~~~~~~~~~~----~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~ 91 (118)
T 2eo9_A 24 GTFVLSCVATGSPVPTILWRK-DGVLVS-------TQDSRIKQLENG----VLQIRYAKLGDTGRYTCIASTPSGEATWS 91 (118)
T ss_dssp CEEEEECBCCCSSCCEEEEEE-SSSBCC-------TTSTTEEEEETT----EEEEESCCGGGCCCEEEEEECSSCEEEEE
T ss_pred CeEEEEEEEEecCCCEEEEEE-CCEECc-------CCCCeEEEccCC----EEEEccCCcCCCEEEEEEEEcCCCcEEEE
Confidence 468899999999999999999 554442 124556555554 8999999999999999999776 444455
Q ss_pred EEEEEEcCCcccccCCCCcEEEeCC
Q psy16425 82 GYLEVVVPPDILDYPTSTDMVIREG 106 (163)
Q Consensus 82 ~~l~v~~~p~~~~~~~~~~~~~~~g 106 (163)
+.|.|..++.....+......+.+|
T Consensus 92 ~~l~V~~~~~p~~~~~~~~~~~~~G 116 (118)
T 2eo9_A 92 AYIEVQEFGVPVQPPRPTDPNLIPS 116 (118)
T ss_dssp CCEEEECCSCCCCCCCCCCCCCCCC
T ss_pred EEEEEEeCCCCccCCCCCCCccCCC
Confidence 6677777655433333333344444
No 236
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.40 E-value=8e-12 Score=75.51 Aligned_cols=83 Identities=19% Similarity=0.169 Sum_probs=60.9
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
.++.|.|...+.|.+.|.|++ ++..+ ....++.+... .....|.|.+++.+|+|.|+|.+.|. +.....
T Consensus 23 ~~v~l~C~~~g~p~p~i~W~k-~~~~~--------~~~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~ 92 (114)
T 2cqv_A 23 ESVELFGKVTGTQPITCTWMK-FRKQI--------QESEHMKVENS-ENGSKLTILAARQEHCGCYTLLVENKLGSRQAQ 92 (114)
T ss_dssp CCEEEEEEEESSSSCEEEEEE-SSSBC--------CCSSSEEEEEC-SSEEEEEETTCCTTTCEEEEEEEECSSCEEECC
T ss_pred CeEEEEEEEEcCCCCEEEEEE-CCEEC--------cCCCCEEEEEc-CCEEEEEECCCChhcCEEEEEEEEECCCcEEEE
Confidence 468899999999999999999 55544 22345555432 23558999999999999999999776 444556
Q ss_pred EEEEEEcCCccccc
Q psy16425 82 GYLEVVVPPDILDY 95 (163)
Q Consensus 82 ~~l~v~~~p~~~~~ 95 (163)
+.|.|...|.....
T Consensus 93 ~~l~V~~~p~~P~~ 106 (114)
T 2cqv_A 93 VNLTVVDKPDPPAG 106 (114)
T ss_dssp EEEEEECSCSCCCC
T ss_pred EEEEEECCCCCCCC
Confidence 77888776655443
No 237
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.40 E-value=2.1e-12 Score=89.85 Aligned_cols=111 Identities=19% Similarity=0.340 Sum_probs=71.5
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCC--ceE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPM--KSQ 80 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~--~~~ 80 (163)
..+.|.|...+. |.|++ ++..+. .+......+.....|.|.+++.+|+|.|+|.+.+... ...
T Consensus 16 ~~v~L~C~~~~~----v~W~~-~~~~~~----------~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~ 80 (289)
T 3mjg_X 16 STFVLTCSGSAP----VVWER-MSQEPP----------QEMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSRGLETDE 80 (289)
T ss_dssp CCEEEEEEESSC----CEEEB-TTBCCS----------EEEEECTTSCEEEEEEECSCCGGGCEEEEEECCC------CC
T ss_pred CcEEEEEeccce----EEEEC-CCCCcc----------cceeccCCCceeEEEEEccCChhhCEEEEEEEcccCCCCcCc
Confidence 367888877654 89999 444431 1122222222235899999999999999999966531 223
Q ss_pred eEEEEEEcC-CcccccCCCCc---EEEeCCCcEEEEeEeccCCCCeEEEEECC
Q psy16425 81 VGYLEVVVP-PDILDYPTSTD---MVIREGSNVTLKCAASGSPKPNITWRREG 129 (163)
Q Consensus 81 ~~~l~v~~~-p~~~~~~~~~~---~~~~~g~~~~l~C~~~~~p~p~v~W~~~~ 129 (163)
...+.+.+. |.....+.... ..+.+|+++.|.|.+. .|.|.++|++++
T Consensus 81 ~~~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~w~~~~ 132 (289)
T 3mjg_X 81 RKRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVT-DPQLVVTLHEKK 132 (289)
T ss_dssp CEEEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBS-CTTSCEEEEESS
T ss_pred EEeEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcC-CCCceEEEEeCC
Confidence 345555554 33333222222 6688999999999998 788899999865
No 238
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.40 E-value=2.7e-12 Score=76.01 Aligned_cols=77 Identities=14% Similarity=0.216 Sum_probs=55.6
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.|.|...+.|.|.|.|++ ++..+.. ....|+.+.... ...+|.|.+++.+|+|.|+|.+.|. +.....
T Consensus 21 ~~~~l~C~~~g~P~p~v~W~k-~g~~i~~------~~~~~~~~~~~~-~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~ 92 (100)
T 3knb_A 21 KVLTVACAFTGEPTPEVTWSC-GGRKIHS------QEQGRFHIENTD-DLTTLIIMDVQKQDGGLYTLSLGNEFGSDSAT 92 (100)
T ss_dssp SEEEEEEEEEEESCCEEEEEE-TTEECCT------TGGGTEEEEECS-SEEEEEESSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEEEecCCEEEEEE-CceEeee------eccceeeeeccc-ceEEEEEcCCCccCCEEEEEEEEECCCEEEEE
Confidence 468899999999999999999 5555421 122355554433 3458999999999999999999876 444455
Q ss_pred EEEEEE
Q psy16425 82 GYLEVV 87 (163)
Q Consensus 82 ~~l~v~ 87 (163)
+.|.|.
T Consensus 93 ~~l~V~ 98 (100)
T 3knb_A 93 VNIHIR 98 (100)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 556554
No 239
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.39 E-value=3.5e-12 Score=75.54 Aligned_cols=75 Identities=13% Similarity=0.221 Sum_probs=56.6
Q ss_pred eeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCceEeEE
Q psy16425 4 RMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKSQVGY 83 (163)
Q Consensus 4 ~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~ 83 (163)
.+.+.|.. .|.+.|.||| ++..+ ....|+.+...+ ...+|.|.+++.+|+|.|+|.+.|. ..+..+.
T Consensus 24 ~v~l~C~v--~p~p~v~W~k-~g~~l--------~~~~r~~i~~~~-~~~~L~I~~v~~~D~G~Y~C~a~N~-~~~~~a~ 90 (100)
T 2yuz_A 24 EICLKCEI--SENIPGKWTK-NGLPV--------QESDRLKVVQKG-RIHKLVIANALTEDEGDYVFAPDAY-NVTLPAK 90 (100)
T ss_dssp CCCEEEEC--SSCCCEEEEE-TTEEC--------CCCSSEEEEECS-SEEEEEESSCCGGGCSEEEEEESSS-CCCEEEE
T ss_pred CEEEEEEe--CCCCeEEEEE-CCEEC--------CCCCcEEEEEeC-CEEEEEECCCChhhCEEEEEEEcCC-CeeEEEE
Confidence 46677776 7889999999 66655 234566655543 3458999999999999999999776 5567788
Q ss_pred EEEEcCCc
Q psy16425 84 LEVVVPPD 91 (163)
Q Consensus 84 l~v~~~p~ 91 (163)
|.|..+|.
T Consensus 91 L~V~~~P~ 98 (100)
T 2yuz_A 91 VHVISGPS 98 (100)
T ss_dssp EEEECCSC
T ss_pred EEEeCCCC
Confidence 88887764
No 240
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.38 E-value=3.1e-12 Score=78.61 Aligned_cols=79 Identities=11% Similarity=0.068 Sum_probs=55.5
Q ss_pred eeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEE--e---C-CCceEEEEEcccCCCCCeEEEEEEEeC-C
Q psy16425 4 RMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVT--H---S-ETKAWYLHIREVRESDRGWYMCQVNTD-P 76 (163)
Q Consensus 4 ~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~--~---~-~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~ 76 (163)
++.+.|...+.|.|.|+|+| ++..+.. ..++... . . ....++|.|.+++..|+|.|+|.|.|. |
T Consensus 17 ~~~l~c~v~G~P~P~I~W~k-nG~~l~~--------~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G 87 (126)
T 1he7_A 17 HWCIPFSVDGQPAPSLRWLF-NGSVLNE--------TSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFG 87 (126)
T ss_dssp EEEEEEEECCSSCCEEEEEE-TTEECCC--------CSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTE
T ss_pred cEEEEEEEeeeCCCeEEEEE-CCEECCC--------CCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCC
Confidence 67789999999999999999 6666532 2222211 1 0 012358999999999999999999876 4
Q ss_pred CceEeEEEEEEcCCc
Q psy16425 77 MKSQVGYLEVVVPPD 91 (163)
Q Consensus 77 ~~~~~~~l~v~~~p~ 91 (163)
.....+.|.|...|.
T Consensus 88 ~~~~t~~l~v~~~P~ 102 (126)
T 1he7_A 88 QASASIMAAFMDNPF 102 (126)
T ss_dssp EEEEEEEECCCSCTT
T ss_pred eEEEEEEEEEEcCCC
Confidence 445555666665553
No 241
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.38 E-value=5.5e-12 Score=93.79 Aligned_cols=124 Identities=15% Similarity=0.141 Sum_probs=75.9
Q ss_pred ceeEEEeeeeccCC---CEEEEEEcCCceEEeeeee-EEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCC-
Q psy16425 3 ARMLIEIGEMLMAE---STVAWLRVDTQTILTIQTH-VITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPM- 77 (163)
Q Consensus 3 ~~~~~~~~~~~~~~---~~i~W~k~~~~~~~~~~~~-~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~- 77 (163)
..+.|.|...+.++ +.|.| + ++......... .....+.+. ....|.|.+++.+|+|.|+|.+.+...
T Consensus 263 ~~v~L~C~~~g~~p~~~~~i~W-~-~~~~~~~~~~~~~~~~~g~~~------~~~~L~I~~~~~~d~G~Y~C~a~n~~~~ 334 (475)
T 1iga_A 263 SEANLTCTLTGLRDASGVTFTW-T-PSSGKSAVQGPPERDLCGCYS------VSSVLPGCAEPWNHGKTFTCTAAYPESK 334 (475)
T ss_pred CceEEEEEEEcccCCCceEEEE-C-CCCcCCccccCceECCCCCEE------EEEEEEEchHHhccCCcEEEEEEcCCCC
Confidence 36788888877644 69999 4 33221110000 000111111 233799999999999999999976632
Q ss_pred ceEeEEEE---EEcCCcccccCCCCcEEEeCCCcEEEEeEeccC-CC-CeEEEEECCeEEEec
Q psy16425 78 KSQVGYLE---VVVPPDILDYPTSTDMVIREGSNVTLKCAASGS-PK-PNITWRREGGELIAQ 135 (163)
Q Consensus 78 ~~~~~~l~---v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-p~v~W~~~~~~~~~~ 135 (163)
......+. +..+|.+...+.. ...+.+|+++.|.|.+.|. |+ +.+.|+++|..+...
T Consensus 335 ~~~~~~v~~~~~~~~P~v~~~~~~-~~~v~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~ 396 (475)
T 1iga_A 335 TPLTATLSKSGNTFRPEVHLLPPP-SEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPRE 396 (475)
T ss_pred CceEEEeecCCCCCCCeEEEECCC-hHHhccCCceEEEEEEeeeECCCCEEEEEECCEECCCC
Confidence 22333342 2455655443322 2235679999999999986 43 489999999887443
No 242
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.38 E-value=6.7e-12 Score=73.79 Aligned_cols=76 Identities=18% Similarity=0.194 Sum_probs=54.1
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.|.|...+.|.+.|.|++ ++..+. ...++.......+..+|.|.+++.+|+|.|+|.+.|. +.....
T Consensus 21 ~~v~l~C~~~g~p~p~v~W~k-~g~~~~--------~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~ 91 (99)
T 1g1c_A 21 SDAHFRVRVVGKPDPECEWYK-NGVKIE--------RSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAINIAGETSSH 91 (99)
T ss_dssp SCEEEEEEEEEESCCEEEEEE-TTEECC--------CCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEEEeCCCEEEEEE-CCEECC--------CCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEEECCCcEEEE
Confidence 467889999999999999999 555442 2334443333334568999999999999999999776 334444
Q ss_pred EEEEEE
Q psy16425 82 GYLEVV 87 (163)
Q Consensus 82 ~~l~v~ 87 (163)
+.|.|.
T Consensus 92 ~~l~V~ 97 (99)
T 1g1c_A 92 AFLLVQ 97 (99)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 555554
No 243
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.37 E-value=1e-11 Score=85.89 Aligned_cols=121 Identities=14% Similarity=0.268 Sum_probs=71.6
Q ss_pred ceeEEEeeeecc--CCCEEEEEEcCC-ce---EEeeee-----eEEecCCeEEEEeCC-CceEEEEEcccCCCCCeEEEE
Q psy16425 3 ARMLIEIGEMLM--AESTVAWLRVDT-QT---ILTIQT-----HVITKNHRIGVTHSE-TKAWYLHIREVRESDRGWYMC 70 (163)
Q Consensus 3 ~~~~~~~~~~~~--~~~~i~W~k~~~-~~---~~~~~~-----~~~~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C 70 (163)
.++.|.|...+. ....|.||+... .. +..... ......+|+.+..+. .++++|.|.+++.+|+|.|.|
T Consensus 16 ~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C 95 (263)
T 3iu4_H 16 QSLSITCTVSGFSLSRYSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTAMYYC 95 (263)
T ss_dssp SCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECTTSCEEECGGGTTCEEEEEEGGGTEEEEEECSCCGGGCEEEEE
T ss_pred CCEEEEEEeccccCCceEEEEEEECCCCCcEEEEEEeCCCcEeeCcccCCCEEEEecCCCCEEEEEECCCCHHHCEEEEE
Confidence 468888887543 367899998532 11 111110 011235788876554 367889999999999999999
Q ss_pred EEEeCC---------CceEeEEEEEEc----CCcccccCCCCcEEEeCCCcEEEEeEecc-CCC-CeEEE
Q psy16425 71 QVNTDP---------MKSQVGYLEVVV----PPDILDYPTSTDMVIREGSNVTLKCAASG-SPK-PNITW 125 (163)
Q Consensus 71 ~~~~~~---------~~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~-p~v~W 125 (163)
.+.+.. .......|.|.. +|.+..... ...+.+|+.+.|.|.+.+ .|. +.++|
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~--~~~~~~g~~~~L~C~~~~~~P~~~~v~W 163 (263)
T 3iu4_H 96 ARSGVREGRAQAWFAYWGQGTLVTVSAASTKGPSVFPLAP--SSKGSTSGTAALGCLVKDYFPEPVTVSW 163 (263)
T ss_dssp EEEECC---CEEEEEEECCCEEEEECSSCCBCCEEEEECC--CCCC----EEEEEEEEEEEBSSCCEEEE
T ss_pred EEEeCCCCccccccceeCCceEEEEecccCCCCEEEEccC--ccccccCCcEEEEEEEEeEeCCceEEEE
Confidence 996542 111223556642 233332121 122347899999999987 453 67999
No 244
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.37 E-value=7.6e-12 Score=79.70 Aligned_cols=85 Identities=15% Similarity=0.174 Sum_probs=60.3
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.|.|...+.|.+.|.|++ ++..+ ....++.+.....+...|.|.+++..|+|.|+|.+.|. +.....
T Consensus 57 ~~v~L~C~~~g~P~p~v~W~k-~g~~~--------~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~ 127 (154)
T 1fhg_A 57 SAARFDCKVEGYPDPEVMWFK-DDNPV--------KESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVNSLGEATCT 127 (154)
T ss_dssp SCEEEEEEEEEESCCEEEEEE-TTEEC--------CCSSSEEEEECTTCEEEEEESSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEEEecCCEEEEEE-CCEEC--------CCCCcEEEEECCCCeEEEEECCCChhcCEEEEEEEEECCCeEEEE
Confidence 357889999999999999999 55444 23455665554445678999999999999999999776 445566
Q ss_pred EEEEEEcCCcccccC
Q psy16425 82 GYLEVVVPPDILDYP 96 (163)
Q Consensus 82 ~~l~v~~~p~~~~~~ 96 (163)
+.|.|..+|.....+
T Consensus 128 ~~l~V~~~p~~~~~~ 142 (154)
T 1fhg_A 128 AELLVETMGKEGEGE 142 (154)
T ss_dssp EEEEEECC-------
T ss_pred EEEEEeCcCcCCCCC
Confidence 778888877665433
No 245
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.37 E-value=3.1e-11 Score=82.95 Aligned_cols=121 Identities=16% Similarity=0.314 Sum_probs=72.4
Q ss_pred ceeEEEeeeec--cCCCEEEEEEcCC-ce---EEeee------eeEEecCCeEEEEeCC-CceEEEEEcccCCCCCeEEE
Q psy16425 3 ARMLIEIGEML--MAESTVAWLRVDT-QT---ILTIQ------THVITKNHRIGVTHSE-TKAWYLHIREVRESDRGWYM 69 (163)
Q Consensus 3 ~~~~~~~~~~~--~~~~~i~W~k~~~-~~---~~~~~------~~~~~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~ 69 (163)
.++.|.|...+ .....+.||+... .. +.... .......+|+.+..+. .++++|.|.+++.+|+|.|.
T Consensus 39 ~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~ 118 (256)
T 3sob_H 39 GSLRLSCAASGFTFTNSYIHWVRQAPGKGLEWVGWITPYGGYTNYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYY 118 (256)
T ss_dssp CCEEEEEEEESSCGGGSCEEEEEECTTCCCEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEE
T ss_pred CCEEEEEEeeccccCCCEEEEEEECCCCCcEEEEEEecCCCceecCCCCCCcEEEEEeCCCCEEEEEECCCCcccCEEEE
Confidence 46788888753 3457899998532 11 11111 0011234688876554 46788999999999999999
Q ss_pred EEEEeCC------------CceEeEEEEEEc----CCcccccCCCCcEEEeCCCcEEEEeEecc-CC-CCeEEE
Q psy16425 70 CQVNTDP------------MKSQVGYLEVVV----PPDILDYPTSTDMVIREGSNVTLKCAASG-SP-KPNITW 125 (163)
Q Consensus 70 C~~~~~~------------~~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p-~p~v~W 125 (163)
|.+.+.+ .......|.|.. +|.+...+. ...+.+|+.+.|.|.+.+ .| .+.+.|
T Consensus 119 C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~--~~~~~~g~~v~L~C~~~~~~p~~~~v~W 190 (256)
T 3sob_H 119 CARGSGHVNAVKNYGYVMDYWGQGTLVTVSSASTKGPSVFPLAP--SSKSTSGGTAALGCLVKDYFPEPVTVSW 190 (256)
T ss_dssp EEEESSCTTCSSCCTTSEEEECCCEEEEECSSCCBCCEEEEECC--C-----TTEEEEEEEEEEEBSSCCEEEE
T ss_pred EEEecCCCccccccccceeEECCCEEEEEecCCCCCCEEEEECC--CcccccCCcEEEEEEEEEEECCCeEEEE
Confidence 9996532 112233566642 233332221 223567999999999987 55 357999
No 246
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.36 E-value=9.9e-12 Score=90.06 Aligned_cols=122 Identities=13% Similarity=0.165 Sum_probs=73.9
Q ss_pred ceeEEEeeeecc---CC-CEEEEEEcCCceEEeeeee-EEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCC
Q psy16425 3 ARMLIEIGEMLM---AE-STVAWLRVDTQTILTIQTH-VITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPM 77 (163)
Q Consensus 3 ~~~~~~~~~~~~---~~-~~i~W~k~~~~~~~~~~~~-~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~ 77 (163)
..+.|.|...+. |. ..|.|+++++......... .....+.+. ....|.|.+++.+|+|.|+|.+.+...
T Consensus 184 ~~v~L~C~~~g~~P~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~------~~s~L~I~~~~~~D~g~Y~C~~~~~~~ 257 (376)
T 2aty_A 184 LTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFR------SVSELPIMHQDWLNGKEFKCRVNSAAF 257 (376)
T ss_pred CeeEEEEEEeccccCCCccEEEEEECCccccCcccCCCCcccCCcEE------EEEEEEechHhccCCCEEEEEEecCCC
Confidence 467788887766 32 4799999553321110000 000111111 223799999999999999999966532
Q ss_pred -ceEeEEE----EEEcCCcccccCCCCcEEEeCCCcEEEEeEeccC-C-CCeEEEEECCeEE
Q psy16425 78 -KSQVGYL----EVVVPPDILDYPTSTDMVIREGSNVTLKCAASGS-P-KPNITWRREGGEL 132 (163)
Q Consensus 78 -~~~~~~l----~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p-~p~v~W~~~~~~~ 132 (163)
......+ .+..+|.+...+.. ....+|+.+.|.|.+.|. | .+.|+|++++..+
T Consensus 258 ~~~~~~~v~~~~~~~~~P~v~v~~~~--~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~~ 317 (376)
T 2aty_A 258 PAPIEKTISKTKGRPKAPQLYTIPPP--KEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPA 317 (376)
T ss_pred CCceEEEEcCCCCCCcCCeEEeeCCC--HHHhcCCceEEEEEEEEeECCCcEEEEEECCEEC
Confidence 2222222 33445655544432 223458899999999985 3 4589999999876
No 247
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.36 E-value=1e-11 Score=73.16 Aligned_cols=77 Identities=19% Similarity=0.237 Sum_probs=53.2
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.|.|...+.|.+.|.|++ ++..+.. ..+........+..+|.|.+++.+|+|.|+|.+.|. +.....
T Consensus 21 ~~~~l~C~~~g~p~p~v~W~~-~g~~~~~--------~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~ 91 (100)
T 2kdg_A 21 RFCRMDFKVSGLPAPDVSWYL-NGRTVQS--------DDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKNRAGEATFT 91 (100)
T ss_dssp CCEEEEEECEEESCCEEEEEE-TTEEECC--------CSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CEEEEEEEEEeeCCCEEEEEE-CCEECcC--------CCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEEcCCCeEEEE
Confidence 467889999999999999999 5555421 111111222234458999999999999999999776 344455
Q ss_pred EEEEEEc
Q psy16425 82 GYLEVVV 88 (163)
Q Consensus 82 ~~l~v~~ 88 (163)
+.|.|..
T Consensus 92 ~~l~V~~ 98 (100)
T 2kdg_A 92 VQLDVLA 98 (100)
T ss_dssp EEEEEEC
T ss_pred EEEEEEe
Confidence 5666553
No 248
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.35 E-value=7.9e-12 Score=71.62 Aligned_cols=72 Identities=17% Similarity=0.332 Sum_probs=51.4
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCceEeE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKSQVG 82 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~ 82 (163)
.++.|.|...+ |.|.|.||| ++..+. ...++.....+ +..+|.|.+++.+|+|.|+|.+.+ ....+
T Consensus 12 ~~v~l~C~vs~-p~p~v~W~k-~g~~l~--------~~~~~~~~~~~-~~~~L~I~~~~~~D~G~Y~C~a~n---~~~~a 77 (84)
T 2lu7_A 12 GDLELVVHLSG-PGGPVRWYK-DGERLA--------SQGRVQLEQAG-ARQVLRVQGARSGDAGEYLCDAPQ---DSRIF 77 (84)
T ss_dssp SCEEEECCCSC-CSTTCEEEE-TTEECC--------CCSSEEEEECS-SCEEEEESSCSSTTCEEEEEECTT---TCEEE
T ss_pred CCEEEEEEECC-CCcEEEEEE-CCEEcc--------ccccEEEeecC-CeEEEEecCCCCcccEEEEEEECC---EEEEE
Confidence 36788887755 888999999 666652 34455555443 345899999999999999998833 35556
Q ss_pred EEEEEc
Q psy16425 83 YLEVVV 88 (163)
Q Consensus 83 ~l~v~~ 88 (163)
.|.|..
T Consensus 78 ~l~V~e 83 (84)
T 2lu7_A 78 LVSVEE 83 (84)
T ss_dssp EEEECC
T ss_pred EEEEEC
Confidence 666653
No 249
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.35 E-value=2.1e-12 Score=95.52 Aligned_cols=122 Identities=15% Similarity=0.204 Sum_probs=73.8
Q ss_pred eeEEEeeeecc-CC-CEEEEEEcCCceEEe-eeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCc-e
Q psy16425 4 RMLIEIGEMLM-AE-STVAWLRVDTQTILT-IQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMK-S 79 (163)
Q Consensus 4 ~~~~~~~~~~~-~~-~~i~W~k~~~~~~~~-~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~-~ 79 (163)
.+.|.|...+. |. +.|.|++ ++..+.. ........++++... ..|.|.++..+| |.|+|.+.+.... .
T Consensus 149 ~v~L~C~~~g~~P~~~~v~W~k-~~~~~~~~~~~~~~~~~~~~~~~------s~L~i~~~~~~d-G~Y~C~a~n~~~~~~ 220 (457)
T 1hzh_H 149 TAALGCLVKDYFPEPVTVSWNS-GALTSGVHTFPAVLQSSGLYSLS------SVVTVPSSSLGT-QTYICNVNHKPSNTK 220 (457)
T ss_dssp CEEEEEEEESBBSCCCEEEETT-TTBCTTEEEEEEEECTTSCEEEE------EEEEECSGGGGT-SCCEEEEEEGGGTEE
T ss_pred cEEEEEEEeEEeCCCeEEEEEe-CCEeccceEcCceECCCCCEEEE------EEEEecccccCC-ceEEEEEEeCCCCcc
Confidence 57888888776 54 8999999 4433211 111111223333322 279999999999 9999999775322 2
Q ss_pred EeEEEEEEc-----------------CCcccccCCCCcEEEeCCCcEEEEeEeccCCCC----eEEEEECCeEEE
Q psy16425 80 QVGYLEVVV-----------------PPDILDYPTSTDMVIREGSNVTLKCAASGSPKP----NITWRREGGELI 133 (163)
Q Consensus 80 ~~~~l~v~~-----------------~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p----~v~W~~~~~~~~ 133 (163)
....+.+.. +|.+...++.....+.+|+++.|.|.+.|.|++ .+.|++++..+.
T Consensus 221 ~~~~v~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~ 295 (457)
T 1hzh_H 221 VDKKAEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVH 295 (457)
T ss_dssp EEEECCCCCSCSSCSCCSCCCCCCSSSCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEEC
T ss_pred eeEEecccCCCcccccCCCCCccccCCceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEeCCcccc
Confidence 222232211 232211121111125679999999999987553 899999998764
No 250
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.35 E-value=4.9e-13 Score=98.32 Aligned_cols=146 Identities=8% Similarity=0.041 Sum_probs=86.5
Q ss_pred ceeEEEeeeecc-CCC-EEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCc-e
Q psy16425 3 ARMLIEIGEMLM-AES-TVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMK-S 79 (163)
Q Consensus 3 ~~~~~~~~~~~~-~~~-~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~-~ 79 (163)
..+.|.|...+. |.+ .|.|++. +..+...........+.+... ..|.|.++..+| |.|+|.+.+.... .
T Consensus 135 ~~v~L~C~~~g~~P~p~~v~W~k~-~~~~~~~~~~~~~~~~~~~~~------s~L~i~~~~~~d-g~Y~C~a~n~~~~~~ 206 (434)
T 1igy_B 135 SMVTLGCLVKGYFPEPVTVTWNSG-SLSSGVHTFPAVLQSDLYTLS------SSVTVPSSPRPS-ETVTCNVAHPASSTK 206 (434)
T ss_dssp TEEEEEEEEEEEBSSCCEEEETTT-TBCSSEEECCCEECSSCEEEE------EEEEEETTTTTS-SCCEEEEECTTTTCC
T ss_pred CcEEEEEEEeeecCCCeEEEEeeC-CcCCCeEecCceecCCcEEEE------EEEEEcchhcCC-CcEEEEEEeCCCCcc
Confidence 367888888775 665 9999994 433210000001111333322 269999999999 9999999776322 2
Q ss_pred EeEEEEEEc---------C---CcccccCCCCcEEEeCCCcEEEEeEeccCC----CCeEEEEECCeEEEecCCce----
Q psy16425 80 QVGYLEVVV---------P---PDILDYPTSTDMVIREGSNVTLKCAASGSP----KPNITWRREGGELIAQGNGQ---- 139 (163)
Q Consensus 80 ~~~~l~v~~---------~---p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p----~p~v~W~~~~~~~~~~~~~~---- 139 (163)
....+.+.. . |.+...++.....+.+|+++.|.|.+.|.| .+.++|++++..+.......
T Consensus 207 ~~~~~~~~~~~~~v~~~~~~~~p~v~~~~p~~~~~v~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~~ 286 (434)
T 1igy_B 207 VDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKDTLLITVTPKVTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQPREEQ 286 (434)
T ss_dssp EEEECCCCCCCCCCCCCCCSSSCCEEEECCCHHHHHSTTSCCEEEEEECCCCSSCCCCCBCBBSSSCCBCCCSCCCCCCC
T ss_pred ceeeccCCCCCCccccCCCCcCcEEEEeCCChHHhcccCCCcEEEEEEeccccCCCCeEEEEEeCCcccCCcccCcceeC
Confidence 333332210 0 232222211111167899999999999874 35899999997764321111
Q ss_pred -----EEeceEEEEcchhhhHh
Q psy16425 140 -----EDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 140 -----~~~~~l~i~~v~~~~~~ 156 (163)
...+.|.|.++..+|.+
T Consensus 287 ~~~~~~~~~~L~i~~~~~~d~G 308 (434)
T 1igy_B 287 FNSTFRVVSALPIMHQDWLNGK 308 (434)
T ss_dssp CSSSCCCCCCEECCHHHHHHTC
T ss_pred CCCcEEEEEEEEECHHHccCCC
Confidence 12346899999888875
No 251
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.34 E-value=9.3e-12 Score=74.70 Aligned_cols=81 Identities=16% Similarity=0.156 Sum_probs=60.7
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.|.|...+.|.+.|.|++ ++..+. ....++.+.....+...|.|.+++.+|+|.|+|.+.|. +.....
T Consensus 24 ~~v~l~C~~~g~p~p~v~W~k-~g~~~~-------~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~ 95 (110)
T 2dm2_A 24 MPVTFTCRVAGNPKPKIYWFK-DGKQIS-------PKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRISCT 95 (110)
T ss_dssp CCEEEEEEBCCSSCCEEEEEC-SSCBCC-------TTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEEEECTTCCEEEC
T ss_pred CeEEEEEEEEecCCCEEEEEE-CCEECC-------CCCCeEEEEECCCcEEEEEECCCChhhCEEEEEEEEECCCeEEEE
Confidence 468889999999999999999 555442 12355666655555668999999999999999999776 455556
Q ss_pred EEEEEEcCCc
Q psy16425 82 GYLEVVVPPD 91 (163)
Q Consensus 82 ~~l~v~~~p~ 91 (163)
+.|.|...|.
T Consensus 96 ~~l~V~~~~~ 105 (110)
T 2dm2_A 96 GRLMVQAVNS 105 (110)
T ss_dssp CCEEEECCSC
T ss_pred EEEEEECCCC
Confidence 6777776553
No 252
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.33 E-value=7.6e-12 Score=74.41 Aligned_cols=78 Identities=10% Similarity=0.090 Sum_probs=53.2
Q ss_pred eeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeE--EE--EeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCc
Q psy16425 4 RMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRI--GV--THSETKAWYLHIREVRESDRGWYMCQVNTD-PMK 78 (163)
Q Consensus 4 ~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~--~~--~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~ 78 (163)
.+.+.|...+.|.|.|.|++ ++..+.. ..+. .. .........|.|.+++.+|+|.|+|.+.|. +..
T Consensus 18 ~~~~~c~v~G~P~P~i~W~k-~g~~l~~--------~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~ 88 (103)
T 1wwb_X 18 HWCIPFTVKGNPKPALQWFY-NGAILNE--------SKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKD 88 (103)
T ss_dssp EEEEEEEEECSSCCEEEEEE-TTEEECC--------CSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEE
T ss_pred EEEEEEEEEEeCCCEEEEEE-CCEECCC--------CCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcE
Confidence 46788889999999999999 6655522 1221 11 111112346999999999999999999776 444
Q ss_pred eEeEEEEEEcCC
Q psy16425 79 SQVGYLEVVVPP 90 (163)
Q Consensus 79 ~~~~~l~v~~~p 90 (163)
...+.|.|...|
T Consensus 89 ~~~~~l~V~~~P 100 (103)
T 1wwb_X 89 EKQISAHFMGWP 100 (103)
T ss_dssp EEEEEECCSCCC
T ss_pred eEEEEEEECCCC
Confidence 555566665554
No 253
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=99.32 E-value=2.4e-11 Score=76.58 Aligned_cols=89 Identities=19% Similarity=0.322 Sum_probs=64.7
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCceEeE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKSQVG 82 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~ 82 (163)
.++.|.|...+.+.+.|.|++.+...++. .........|+........+.+|.|.+++.+|+|.|+|.+.+.+.....+
T Consensus 54 ~~v~L~C~~~~~~~~~i~W~~~~~~~i~~-~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~~~~ 132 (145)
T 1z9m_A 54 GTVVLKCQVKDHEDSSLQWSNPAQQTLYF-GEKRALRDNRIQLVTSTPHELSISISNVALADEGEYTCSIFTMPVRTAKS 132 (145)
T ss_dssp SCEEEEEECSCCTTCCEEEECTTCCEEEE-TTEECSCCTTEEEEEECSSEEEEEECSCCGGGCEEEEEEECSSSCEEEEE
T ss_pred CCEEEEEEEcCCCCcEEEEECCCCcEEEE-CCceecccCCEEEecCCCCeEEEEECCCChhhCEEEEEEEEcCCCceEEE
Confidence 46889999888888999999755444432 22222334677766555567799999999999999999997765556667
Q ss_pred EEEEEcCCcc
Q psy16425 83 YLEVVVPPDI 92 (163)
Q Consensus 83 ~l~v~~~p~~ 92 (163)
.|.|..+|..
T Consensus 133 ~L~V~~~P~~ 142 (145)
T 1z9m_A 133 LVTVLGIPQK 142 (145)
T ss_dssp EEEEECCCC-
T ss_pred EEEEEeCCCC
Confidence 7888876643
No 254
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.31 E-value=5.3e-11 Score=79.45 Aligned_cols=141 Identities=18% Similarity=0.198 Sum_probs=86.2
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.|.|...+.|.+.|.|++ ++..+.. ....++.+.... ....|.|.+++.+|+|.|+|.+.|. +.....
T Consensus 34 ~~v~l~C~~~g~p~p~i~W~~-~g~~l~~------~~~~~~~~~~~~-~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 105 (215)
T 3mtr_A 34 NQVNITCEVFAYPSATISWFR-DGQLLPS------SNYSNIKIYNTP-SASYLEVTPDSENDFGNYNCTAVNRIGQESLE 105 (215)
T ss_dssp CCEEEEEEEEEESCCEEEEEE-TTEESSC------SSSCSEEEEEET-TEEEEEECCCSGGGCEEEEEEEECSSCEEEEE
T ss_pred CCEEEEEEEeecCCCEEEEEE-CCeECCC------CCCccEEEecCC-CeeEEEEecCChhhCeEEEEEEEECCCceEEE
Confidence 468899999999999999999 5554321 111344444322 2458999999999999999999776 444555
Q ss_pred EEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEecc----CCCC--eEEEEECCeEEEecCCce----EEeceEEEEcch
Q psy16425 82 GYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASG----SPKP--NITWRREGGELIAQGNGQ----EDFPFFKRTKKK 151 (163)
Q Consensus 82 ~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~----~p~p--~v~W~~~~~~~~~~~~~~----~~~~~l~i~~v~ 151 (163)
+.|.+..+|...... .....+..+.|.|.... .|.. .+.|..++...-...... .....|+|.++.
T Consensus 106 ~~l~v~~~P~~p~~~----~~~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~l~i~~L~ 181 (215)
T 3mtr_A 106 FILVQADTPSSPSID----QVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLK 181 (215)
T ss_dssp EEEEECCCCCCCEEE----EEEEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEEHHHHHHHTEEEEECCC
T ss_pred EEEEECCCCCCCcce----EEEEecceEEEEEecCCccCCCceEEEEEEEEECCCCcccccccccccccccccEEECCCC
Confidence 666776666443211 12234677888887432 2333 377887764311100000 012567777777
Q ss_pred hhhH
Q psy16425 152 KKKK 155 (163)
Q Consensus 152 ~~~~ 155 (163)
..+.
T Consensus 182 ~~~~ 185 (215)
T 3mtr_A 182 PETT 185 (215)
T ss_dssp TTCE
T ss_pred CCCE
Confidence 6653
No 255
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.31 E-value=4.9e-11 Score=80.50 Aligned_cols=121 Identities=17% Similarity=0.259 Sum_probs=72.9
Q ss_pred ceeEEEeeeec--cCCCEEEEEEcCC-ce---EEeee------eeEEecCCeEEEEeCC-CceEEEEEcccCCCCCeEEE
Q psy16425 3 ARMLIEIGEML--MAESTVAWLRVDT-QT---ILTIQ------THVITKNHRIGVTHSE-TKAWYLHIREVRESDRGWYM 69 (163)
Q Consensus 3 ~~~~~~~~~~~--~~~~~i~W~k~~~-~~---~~~~~------~~~~~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~ 69 (163)
.++.|.|...+ .+...|.||+... .. +.... .......+|+.+..+. .++++|.|.+++.+|+|.|.
T Consensus 16 ~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~ 95 (226)
T 3mlr_H 16 QSLKISCKSSGYNFLDSWIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVDKSISTAYLQWTTLQASDTGKYF 95 (226)
T ss_dssp CCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTBTTBEEEEEGGGTEEEEEESSCCGGGCEEEE
T ss_pred CCEEEEEEecCccccCCEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEecCCCCEEEEEECCCCcccCEEEE
Confidence 46788888754 3467899998531 11 11111 0011224677776544 36788999999999999999
Q ss_pred EEEEeCC----------CceEeEEEEEEc----CCcccccCCCCcEEEeCCCcEEEEeEecc-CC-CCeEEE
Q psy16425 70 CQVNTDP----------MKSQVGYLEVVV----PPDILDYPTSTDMVIREGSNVTLKCAASG-SP-KPNITW 125 (163)
Q Consensus 70 C~~~~~~----------~~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p-~p~v~W 125 (163)
|.+.+.. .......|.|.. +|.+...+ ....+.+|+.+.|.|.+.+ .| .+.+.|
T Consensus 96 C~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~i~~~~--~~~~~~~g~~~~l~C~~~~~~p~~~~v~W 165 (226)
T 3mlr_H 96 CTRLYLFEGAQSSNAFDLWGQGTMILVSSGTTKGPSVFPLA--PSSKSTSGGTAALGCLVKDYFPEPVTVSW 165 (226)
T ss_dssp EEEEEEEESSSEEEEEEEECCCEEEEECCCCCBCCEEEEEE--EEECSTTSSEEEEEEEEEEEBSSCCEEEE
T ss_pred EeEccCCCcccccchhhhhCCccEEeeccCCCCCCcEEEec--CcccccCCCCEEEEEEEEEEECCCeEEEE
Confidence 9995431 011223455532 22222111 1222457899999999987 45 457999
No 256
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.31 E-value=5.2e-12 Score=90.21 Aligned_cols=121 Identities=18% Similarity=0.241 Sum_probs=71.6
Q ss_pred ceeEEEeeeecc-CC-CEEEEEEcCCceEEe-eeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCc-
Q psy16425 3 ARMLIEIGEMLM-AE-STVAWLRVDTQTILT-IQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMK- 78 (163)
Q Consensus 3 ~~~~~~~~~~~~-~~-~~i~W~k~~~~~~~~-~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~- 78 (163)
..+.|.|...+. |. +.|.|++ ++..+.. .........+++... ..|.|.+++.+| |.|+|.+.+....
T Consensus 136 ~~v~L~C~~~g~~P~~~~v~W~k-~g~~~~~~~~~~~~~~~~~~~~~------s~L~i~~~~~~d-G~Y~C~a~n~~~~~ 207 (344)
T 1za6_B 136 GTAALGCLVKDYFPEPVTVSWNS-GALTSGVHTFPAVLQSSGLYSLS------SVVTVPSSSLGT-QTYICNVNHKPSNT 207 (344)
T ss_dssp SEEEEEEEEEEEBSSCCCEEETT-TTBCTTEEECCCEECTTSCEEEE------EEEEEETTHHHH-BCEEEEEEEGGGTE
T ss_pred CcEEEEEEEeeEECCCeEEEEec-CCccCceeECCCeECCCCCEEEE------EEEEEcHHHcCC-CcEEEEEEeCCCCc
Confidence 367888888776 54 7999999 4443211 011111223344332 279999999888 9999999776332
Q ss_pred eEeEEEE------------------------EEcCCcccccCCCCcEEEeCCCcEEEEeEeccC-C-CCeEEEEECCeEE
Q psy16425 79 SQVGYLE------------------------VVVPPDILDYPTSTDMVIREGSNVTLKCAASGS-P-KPNITWRREGGEL 132 (163)
Q Consensus 79 ~~~~~l~------------------------v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p-~p~v~W~~~~~~~ 132 (163)
.....+. ...+|.+...+.. .. ..+|+.+.|.|.+.|. | .+.+.|+++|..+
T Consensus 208 ~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~P~v~~~~~~-~~-~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~ 285 (344)
T 1za6_B 208 KVDKKVEPKSCDKTHTCPPCGGGSSGGGSGGQPREPQVYTLPPS-RD-ELTKNQVSLTCLVKGFYPSDIAVEWESNGQPE 285 (344)
T ss_dssp EEEEEECCCCC--------------------CCBCCEEEEECCC-GG-GGGSSSEEEEEEEEEEBSSCCEEEEESSSSCC
T ss_pred cceEeecccccccccccCCCCCCccccccCCCCcCCEEEEeCCC-hH-hccCCcEEEEEEEeeEECCCeEEEEEECCeEC
Confidence 2222221 1223443332211 11 2246679999999985 4 3589999999876
Q ss_pred E
Q psy16425 133 I 133 (163)
Q Consensus 133 ~ 133 (163)
.
T Consensus 286 ~ 286 (344)
T 1za6_B 286 N 286 (344)
T ss_dssp C
T ss_pred C
Confidence 4
No 257
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.31 E-value=2e-11 Score=72.71 Aligned_cols=78 Identities=17% Similarity=0.277 Sum_probs=55.1
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.|.|...+.|.+.|.|++ ++..+. ...++.+...+ ...+|.|.+++.+|+|.|+|.+.|. +.....
T Consensus 29 ~~v~l~C~~~g~p~p~i~W~~-~~~~~~--------~~~~~~~~~~~-~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~ 98 (107)
T 3irg_B 29 AEAELKCVVLGEPPPVVVWEK-GGQQLA--------ASERLSFPADG-AEHGLLLTAALPTDAGVYVCRARNAAGEAYAA 98 (107)
T ss_dssp SCEEEEEEEEEESCCEEEEEE-TTEECC--------CCSSEECCEET-TEEEEEESSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEeecCCCEEEEEE-CCeECC--------CCCcEEEEeCC-CEEEEEEccCCHHhCEEEEEEEEcCCCcEEEE
Confidence 467889999999999999999 555442 23444433322 3458999999999999999999776 344455
Q ss_pred EEEEEEcCC
Q psy16425 82 GYLEVVVPP 90 (163)
Q Consensus 82 ~~l~v~~~p 90 (163)
+.|.|..+|
T Consensus 99 ~~l~V~~~P 107 (107)
T 3irg_B 99 AAVTVLEPP 107 (107)
T ss_dssp EEEEEEC--
T ss_pred EEEEEEcCC
Confidence 667766544
No 258
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.31 E-value=1.1e-10 Score=79.20 Aligned_cols=143 Identities=13% Similarity=0.096 Sum_probs=83.2
Q ss_pred ceeEEEeeeeccC--CCEEEEEEcC-Cce--EEee-e-eeEEecCCeEEEEeC-CCceEEEEEcccCCCCCeEEEEEEEe
Q psy16425 3 ARMLIEIGEMLMA--ESTVAWLRVD-TQT--ILTI-Q-THVITKNHRIGVTHS-ETKAWYLHIREVRESDRGWYMCQVNT 74 (163)
Q Consensus 3 ~~~~~~~~~~~~~--~~~i~W~k~~-~~~--~~~~-~-~~~~~~~~r~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~~~~ 74 (163)
..+.|.|...+.+ ...|.||+.. +.. .... . .......+|+.+..+ ..++++|.|.+++.+|+|.|.|.+.+
T Consensus 17 ~~vtL~C~~s~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~Dsg~Y~C~~~~ 96 (229)
T 1hxm_A 17 VPATLRCSMKGEAIGNYYINWYRKTQGNTMTFIYREKDIYGPGFKDNFQGDIDIAKNLAVLKILAPSERDEGSYYCACDT 96 (229)
T ss_dssp CCEEEEEEECSSCGGGSEEEEEEEESSSCSEEEEETTTEECTTTTTTEEEEEEGGGTEEEEEESSCCGGGCEEEEEEEEC
T ss_pred CCEEEEeEecCCccCcceEEEEEECCCCCcEEEEEcCCccCCCcCCeEEEEEcCCCCEEEEEECcCCHhHCeEEEEEEec
Confidence 4678888876433 5789999853 211 1111 1 111123578887754 34678999999999999999999965
Q ss_pred CC------C---ceEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccC-CCC-eEEEEECCeEEEecCCce--EE
Q psy16425 75 DP------M---KSQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGS-PKP-NITWRREGGELIAQGNGQ--ED 141 (163)
Q Consensus 75 ~~------~---~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p-~v~W~~~~~~~~~~~~~~--~~ 141 (163)
.. . ......|.|.........| ...+.. ..+.|.|.+.+. |.+ .+.|.++ ..+....... ..
T Consensus 97 ~~~~~~~~~~~~~g~gt~L~V~~~~~~~~~P---~v~~~~-~~~~L~C~~~g~~P~~i~v~W~~~-~~~~~~~~~~~~~~ 171 (229)
T 1hxm_A 97 LGMGGEYTDKLIFGKGTRVTVEPRSQPHTKP---SVFVMK-NGTNVACLVKEFYPKDIRINLVSS-KKITEFDPAIVISP 171 (229)
T ss_dssp CCCSSSCCCCCEEBCCEEEEEECCSCCCBCC---EEEEEE-ETTEEEEEEESCBSSCCEEEEECS-SEEEECCCEEEECT
T ss_pred CCCcccccchhhcCccEEEEEeccCCCCcCC---cEEEcC-CCCeEEEEEEEEeCCCEEEEEecC-CEEecCccceEECC
Confidence 42 1 1223466666422111111 222222 234899999874 654 8999999 7664332211 13
Q ss_pred eceEEEEcc
Q psy16425 142 FPFFKRTKK 150 (163)
Q Consensus 142 ~~~l~i~~v 150 (163)
++.|.+...
T Consensus 172 dg~y~~~~~ 180 (229)
T 1hxm_A 172 SGKYNAVKL 180 (229)
T ss_dssp TSSEEEEEE
T ss_pred CCcEEEEEC
Confidence 356666543
No 259
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.30 E-value=2.1e-11 Score=71.82 Aligned_cols=75 Identities=21% Similarity=0.341 Sum_probs=55.3
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.|.|...+.|.+.|.|++ ++..+. ....++.....+ +|.|.+++.+|+|.|+|.+.|. +.....
T Consensus 24 ~~~~l~C~~~g~p~p~v~W~~-~~~~~~-------~~~~~~~~~~~~----~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 91 (100)
T 2edj_A 24 GTALLKCKATGDPLPVISWLK-EGFTFP-------GRDPRATIQEQG----TLQIKNLRISDTGTYTCVATSSSGETSWS 91 (100)
T ss_dssp SEEEECCEEECSSCCEEEEEE-SSSEES-------SSCSSCEECTTC----CEEEESCCTTTCCEEEEEEECSSCCCBCC
T ss_pred CcEEEEEEEEEcCCCEEEEEE-CCEECC-------CCCCCEEEcCCC----EEEEccCCcccCEEEEEEEEcCCCCEEEE
Confidence 468889999999999999999 554442 123444443333 7999999999999999999776 555566
Q ss_pred EEEEEEcC
Q psy16425 82 GYLEVVVP 89 (163)
Q Consensus 82 ~~l~v~~~ 89 (163)
+.|.|..+
T Consensus 92 ~~l~V~~~ 99 (100)
T 2edj_A 92 AVLDVTES 99 (100)
T ss_dssp EEEEEESC
T ss_pred EEEEEecC
Confidence 67777654
No 260
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.30 E-value=4.2e-11 Score=70.86 Aligned_cols=76 Identities=16% Similarity=0.196 Sum_probs=54.9
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.|.|...+.|.+.|.|++ ++..+. ...++...... ...+|.|.+++.+|+|.|+|.+.|. +.....
T Consensus 24 ~~v~l~C~~~g~p~p~i~W~k-~~~~~~--------~~~~~~~~~~~-~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~ 93 (103)
T 3qp3_A 24 QNTRFILNVQSKPTAEVKWYH-NGVELQ--------ESSKIHYTNTS-GVLTLEILDCHTDDSGTYRAVCTNYKGEASDY 93 (103)
T ss_dssp CCEEEEEEEEEESCCEEEEEE-TTEECC--------CCSSEEEEEET-TEEEEEECSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEEecCCCEEEEEE-CCEECC--------CCCCEEEEECC-CEEEEEEcCCCcccCEEEEEEEEeCCCcEEEE
Confidence 467889999999999999999 555442 23344444322 3458999999999999999999776 444555
Q ss_pred EEEEEEc
Q psy16425 82 GYLEVVV 88 (163)
Q Consensus 82 ~~l~v~~ 88 (163)
+.|.|..
T Consensus 94 ~~l~V~~ 100 (103)
T 3qp3_A 94 ATLDVTG 100 (103)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 6666654
No 261
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.30 E-value=4.6e-11 Score=72.58 Aligned_cols=77 Identities=16% Similarity=0.188 Sum_probs=55.5
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.|.|...+.|.|.|.|++ ++..+. ..++.+.. ......|.|.+++.+|+|.|+|.+.|. +.....
T Consensus 40 ~~~~l~C~~~g~P~p~i~W~k-~g~~l~---------~~~~~~~~-~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~ 108 (118)
T 2e7c_A 40 EQLNLVVPFQGKPRPQVVWTK-GGAPLD---------TSRVHVRT-SDFDTVFFVRQAARSDSGEYELSVQIENMKDTAT 108 (118)
T ss_dssp SCEEEEEEEEEESCCEEEEEE-TTEECC---------CSSCEEEE-CSSEEEEEESSCCTTTCEEEEEEEECSSCEECCE
T ss_pred CEEEEEEEEccCCCCEEEEEE-CCEECC---------CCcEEEEE-CCCeEEEEECCCChhcCEEEEEEEEeCCCeEEEE
Confidence 367889999999999999999 555441 23333332 223457999999999999999999776 444555
Q ss_pred EEEEEEcCC
Q psy16425 82 GYLEVVVPP 90 (163)
Q Consensus 82 ~~l~v~~~p 90 (163)
+.|.|...|
T Consensus 109 ~~l~V~~~P 117 (118)
T 2e7c_A 109 IRIRVVEKA 117 (118)
T ss_dssp EEEEEECCC
T ss_pred EEEEEEcCC
Confidence 667776554
No 262
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.29 E-value=3.8e-11 Score=70.52 Aligned_cols=76 Identities=21% Similarity=0.361 Sum_probs=52.3
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.|.|...+.|.+.|.|++ ++..+. ....++..... .+..+|.|.+++.+|+|.|+|.+.|. +.....
T Consensus 21 ~~v~l~C~~~g~p~p~v~W~k-~~~~~~-------~~~~~~~~~~~-~~~~~L~i~~~~~~D~G~Y~C~a~N~~g~~~~~ 91 (99)
T 1u2h_A 21 QDVIMSIRVQGEPKPVVSWLR-NRQPVR-------PDQRRFAEEAE-GGLCRLRILAAERGDAGFYTCKAVNEYGARQCE 91 (99)
T ss_dssp CCEEEEEEEEEESCCEEEEEE-TTEECC-------CBTTEEEEECG-GGEEEEEESSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CEEEEEEEEEEcCCCEEEEEE-CCEECC-------CCCCEEEEECC-CCEEEEEEccCCcCCCEEEEEEEEECCCceeEE
Confidence 468889999999999999999 554432 11233333222 23457999999999999999999776 333444
Q ss_pred EEEEEE
Q psy16425 82 GYLEVV 87 (163)
Q Consensus 82 ~~l~v~ 87 (163)
+.|.|.
T Consensus 92 ~~l~V~ 97 (99)
T 1u2h_A 92 ARLEVR 97 (99)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 455553
No 263
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.28 E-value=2.2e-10 Score=86.09 Aligned_cols=128 Identities=18% Similarity=0.250 Sum_probs=78.8
Q ss_pred ceeEEEeeeeccCC----CEEEEEEcC-Cce---EEe-eee----eEEecCCeEEEEeCC-CceEEEEEcccCCCCCeEE
Q psy16425 3 ARMLIEIGEMLMAE----STVAWLRVD-TQT---ILT-IQT----HVITKNHRIGVTHSE-TKAWYLHIREVRESDRGWY 68 (163)
Q Consensus 3 ~~~~~~~~~~~~~~----~~i~W~k~~-~~~---~~~-~~~----~~~~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y 68 (163)
..+.|.|...+.+. ..|.||+.. +.. +.. ... ......+|+.+..+. .++++|.|.+++.+|+|.|
T Consensus 16 ~~v~L~C~~~~~~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~Dsg~Y 95 (512)
T 1zvo_C 16 ETLSLTCIVSGGPIRRTGYYWGWIRQPPGKGLEWIGGVYYTGSIYYNPSLRGRVTISVDTSRNQFSLNLRSMSAADTAMY 95 (512)
T ss_pred CCEEEEEEEcccccCCCCeeEEEEEeCCCCCcEEEEEEecCCCEEECCccCCceEEEecCCCCEEEEEECcCCHHHCEEE
Confidence 46888888765443 689999853 221 111 110 011234688877653 3578999999999999999
Q ss_pred EEEEEeCCC--------------ceEeEEEEEEc----CCcccccCCCCcEEEeCCCcEEEEeEeccC-CCC-eEEEEEC
Q psy16425 69 MCQVNTDPM--------------KSQVGYLEVVV----PPDILDYPTSTDMVIREGSNVTLKCAASGS-PKP-NITWRRE 128 (163)
Q Consensus 69 ~C~~~~~~~--------------~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p-~v~W~~~ 128 (163)
.|.+.+... ......|.|.. +|.+...... ......|+.+.|.|.+.+. |.| .++|+++
T Consensus 96 ~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~-~~~~~~~~~v~L~C~~~g~~P~p~~v~W~~~ 174 (512)
T 1zvo_C 96 YCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISG-CRHPKDNSPVVLACLITGYHPTSVTVTWYMG 174 (512)
T ss_pred EEEEECCCCccccccccccccccccCceEEEecccCCcCCeEEeccCC-cccccCCCeEEEEEEEEeeecCceEEEEEcC
Confidence 999965421 12334566653 2333211110 1101246899999999886 765 8999997
Q ss_pred CeE
Q psy16425 129 GGE 131 (163)
Q Consensus 129 ~~~ 131 (163)
+..
T Consensus 175 ~~~ 177 (512)
T 1zvo_C 175 TQS 177 (512)
T ss_pred ccc
Confidence 643
No 264
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.27 E-value=2.2e-11 Score=83.14 Aligned_cols=121 Identities=17% Similarity=0.232 Sum_probs=72.9
Q ss_pred ceeEEEeeeeccC----CCEEEEEEcCCceEEeeeee--EEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCC
Q psy16425 3 ARMLIEIGEMLMA----ESTVAWLRVDTQTILTIQTH--VITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDP 76 (163)
Q Consensus 3 ~~~~~~~~~~~~~----~~~i~W~k~~~~~~~~~~~~--~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~ 76 (163)
..+.|.|...+.. ...|.|++ ++..+...... ....++++... ..|.|......|.|.|+|.+.+..
T Consensus 40 ~~~~L~C~v~g~~p~P~~i~v~W~k-~g~~l~~~~~~~~~~~~~g~~~~~------s~L~i~~~~~~d~~~YtC~v~h~~ 112 (240)
T 4acp_A 40 RTPEVTCVVVDVSHEDPEVKFNWYV-DGVEVHNAKTKPREEQYNSTYRVV------SVLTVLHQDWLNGKEYKCKVSNKA 112 (240)
T ss_dssp SCCEEEEEEESCCC--CCCEEEEEE-TTEEECCCEECCCEEC---CEEEE------EEEECCHHHHHHTCCEEEEEECC-
T ss_pred CCcEEEEEEeccccCCCccEEEEEE-CCcccCCceeccceECCCCeEEEE------EEEEEechhccCCCEEEEEEEcCC
Confidence 4678888887753 45899999 56554221110 11123333333 268888888888999999997653
Q ss_pred C-ceEeEEEE----EEcCCcccccCCCCcEEEeCCCcEEEEeEecc-CCCC-eEEEEECCeEE
Q psy16425 77 M-KSQVGYLE----VVVPPDILDYPTSTDMVIREGSNVTLKCAASG-SPKP-NITWRREGGEL 132 (163)
Q Consensus 77 ~-~~~~~~l~----v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p-~v~W~~~~~~~ 132 (163)
. ......+. +..+|.+...+... ...+|+.+.|.|.+.+ +|.+ .++|++++..+
T Consensus 113 ~~~~~~~~i~~~~~~~~~P~V~v~~~~~--~~~~g~~~~L~C~~~gf~P~~i~v~W~k~g~~~ 173 (240)
T 4acp_A 113 LPAPIEKTISKAKGQPREPQVYTLPPSR--DELTKNQVSLTCLVKGFYPSDIAVEWESNGQPE 173 (240)
T ss_dssp ---CEEEEECCCCSCCBCCEEEEECCCG--GGGGSSEEEEEEEEEEEBSSCCEEEEEETTEEC
T ss_pred CCccccccccccCCCCCCCEEEEECCCh--HHhcCCceEEEEEEeEEeCCCcEEEEEECCEEC
Confidence 3 22222222 23455554433221 1224889999999998 5654 79999999875
No 265
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.27 E-value=7.6e-11 Score=69.15 Aligned_cols=75 Identities=20% Similarity=0.366 Sum_probs=54.3
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.|.|...+.|.+.|.|++ ++..+ ....++.+.... +..+|.|.+++.+|+|.|+|.+.|. +.....
T Consensus 22 ~~~~l~C~~~g~p~p~v~W~~-~g~~~--------~~~~~~~~~~~~-~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 91 (99)
T 3puc_A 22 SVAKFAVKATGEPRPTAIWTK-DGKAI--------TQGGKYKLSEDK-GGFFLEIHKTDTSDSGLYTCTVKNSAGSVSSS 91 (99)
T ss_dssp SCEEEEEEEEEESCCEEEEEE-TTEEC--------CSSSSEEEEEET-TEEEEEECSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEEecCCCEEEEEE-CCEEC--------cCCCCEEEEEeC-CEEEEEECCCCcccCEEEEEEEEeCCCcEeEE
Confidence 468889999999999999999 55544 233455554432 3458999999999999999999776 344445
Q ss_pred EEEEEE
Q psy16425 82 GYLEVV 87 (163)
Q Consensus 82 ~~l~v~ 87 (163)
+.|.|.
T Consensus 92 ~~l~V~ 97 (99)
T 3puc_A 92 CKLTIK 97 (99)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 555554
No 266
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.26 E-value=1.2e-11 Score=74.08 Aligned_cols=80 Identities=16% Similarity=0.163 Sum_probs=56.8
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.|.|...+.|.+.|.|++ ++..+. ...+........+..+|.|.+++.+|+|.|+|.+.|. +.....
T Consensus 25 ~~v~l~C~~~g~p~p~v~W~~-~g~~~~--------~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~ 95 (110)
T 2dm3_A 25 KLCRMDCKVSGLPTPDLSWQL-DGKPVR--------PDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATNRAGQNSFS 95 (110)
T ss_dssp SCBCCEEEEECSSCCEEECBB-SSSBCC--------CCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEEECSSCEEEEC
T ss_pred CEEEEEEEEEEcCCCEEEEEE-CCEECC--------CCCceEEEEecCCeEEEEEeeCCcccCEEEEEEEECCCCEEEEE
Confidence 357788998899999999999 554442 1222222223334568999999999999999999776 445556
Q ss_pred EEEEEEcCCc
Q psy16425 82 GYLEVVVPPD 91 (163)
Q Consensus 82 ~~l~v~~~p~ 91 (163)
+.|.|..+|.
T Consensus 96 ~~l~V~~~p~ 105 (110)
T 2dm3_A 96 LELVVAAKES 105 (110)
T ss_dssp CEEEEECCCC
T ss_pred EEEEEeCCCC
Confidence 6777776654
No 267
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.25 E-value=2.3e-11 Score=73.63 Aligned_cols=82 Identities=13% Similarity=0.144 Sum_probs=58.6
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCceEeE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKSQVG 82 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~ 82 (163)
.++.+.|...+.|.|.|.||+ ++..+. ...++.+.....+..+|.|.+++.+|+|.|+|.+ +.....+
T Consensus 29 ~~v~l~C~~~g~p~p~v~W~k-~g~~l~--------~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~---g~~~~~~ 96 (115)
T 2cr6_A 29 SSATFRCRISPANYEPVHWFL-DKTPLH--------ANELNEIDAQPGGYHVLTLRQLALKDSGTIYFEA---GDQRASA 96 (115)
T ss_dssp SCEECCCEEESTTCCSCEEEE-SSCEEC--------CSSSCCBCCBTTTBCCBEECSCCTTTCEEEEEEE---TTEECCE
T ss_pred CcEEEEEEEcCCCCCccEEEE-CCEECC--------CCCcEEEEEcCCCEEEEEEcCCChhhCEEEEEEE---CCeeEEE
Confidence 367888999999999999999 555542 2233333322223457999999999999999995 4455567
Q ss_pred EEEEEcCCcccccC
Q psy16425 83 YLEVVVPPDILDYP 96 (163)
Q Consensus 83 ~l~v~~~p~~~~~~ 96 (163)
.|.|..+|.+...+
T Consensus 97 ~L~V~~~p~~~~~~ 110 (115)
T 2cr6_A 97 ALRVTEKPSVFSRS 110 (115)
T ss_dssp EEEEECCSSCCSSS
T ss_pred EEEEECCCceeccC
Confidence 89998888765433
No 268
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.24 E-value=1.2e-10 Score=68.15 Aligned_cols=74 Identities=18% Similarity=0.250 Sum_probs=52.3
Q ss_pred ceeEEEeeeecc-CCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceE
Q psy16425 3 ARMLIEIGEMLM-AESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQ 80 (163)
Q Consensus 3 ~~~~~~~~~~~~-~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~ 80 (163)
.++.|.|...+. |.+.|.|++ ++..+ ....++.+... .+...|.|.+++.+|+|.|+|.+.|. +....
T Consensus 17 ~~v~l~C~~~g~~p~~~v~W~~-~~~~~--------~~~~~~~~~~~-~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~ 86 (97)
T 2bk8_A 17 GHVKYVCKIENYDQSTQVTWYF-GVRQL--------ENSEKYEITYE-DGVAILYVKDITKLDDGTYRCKVVNDYGEDSS 86 (97)
T ss_dssp CCEEEEEEEESCCTTCEEEEEE-TTEEC--------CSSSSEEEEEE-TTEEEEEECSCCGGGCEEEEEEEECSSCEEEE
T ss_pred CcEEEEEEEeccCCCCEEEEEE-CCEEC--------cCCCCEEEEEc-CCeEEEEEecCChhhCeEEEEEEECCCCeEeE
Confidence 468889999886 999999999 55443 23345544332 23558999999999999999999766 33334
Q ss_pred eEEEEE
Q psy16425 81 VGYLEV 86 (163)
Q Consensus 81 ~~~l~v 86 (163)
.+.|.|
T Consensus 87 ~~~l~V 92 (97)
T 2bk8_A 87 YAELFV 92 (97)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 444544
No 269
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=99.24 E-value=1.5e-10 Score=84.01 Aligned_cols=78 Identities=21% Similarity=0.300 Sum_probs=57.5
Q ss_pred ceEEEEEcccCCCCCeEEEEEEEeCC-CceEeEEEEEEcCCcccccCCCCcEEEeCCC-cEEEEeEecc-CCC--CeEEE
Q psy16425 51 KAWYLHIREVRESDRGWYMCQVNTDP-MKSQVGYLEVVVPPDILDYPTSTDMVIREGS-NVTLKCAASG-SPK--PNITW 125 (163)
Q Consensus 51 ~~~~L~i~~v~~~d~G~Y~C~~~~~~-~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~-~~~l~C~~~~-~p~--p~v~W 125 (163)
++++|.|.+++.+|+|.|.|.+.+.. .....+.|.|..+|.+...+.. ...+..|+ .+.|.|.+.+ +|. +.+.|
T Consensus 252 g~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~v~L~V~~pP~V~v~p~~-~~~~~~G~~~vtL~C~a~GfyP~~~~~VtW 330 (401)
T 3f8u_B 252 GNGTFWLPRVQPFQEGTYLATIHLPYLQGQVTLELAVYKPPKVSLMPAT-LARAAPGEAPPELLCLVSHFYPSGGLEVEW 330 (401)
T ss_dssp EEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCEEEEESSS-CCCCCTTCCCCCEEEEEEEEBSSTTCEEEE
T ss_pred CcEEEEECcCCHhhCceEEEEEEecccceeEEEEEeeccCCeEeeccCc-ceeecCCCccEEEEEEecCCcCCCCcEEEE
Confidence 67899999999999999999996652 3334567778888876654321 11134576 7999999987 566 78999
Q ss_pred E-ECC
Q psy16425 126 R-REG 129 (163)
Q Consensus 126 ~-~~~ 129 (163)
. +++
T Consensus 331 ~~rdg 335 (401)
T 3f8u_B 331 ELRGG 335 (401)
T ss_dssp EEESS
T ss_pred EecCC
Confidence 5 765
No 270
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.24 E-value=6.2e-11 Score=70.70 Aligned_cols=77 Identities=18% Similarity=0.354 Sum_probs=48.5
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.|.|...+.|.+.|.|++ ++..+. ...++..... +.+|.|.+++.+|+|.|+|.+.|. +.....
T Consensus 26 ~~v~l~C~~~g~p~p~i~W~~-~~~~~~--------~~~~~~~~~~---~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~ 93 (108)
T 3kvq_A 26 ESIEVSCTASGNPPPQIMWFK-DNETLV--------EDSGIVLKDG---NRNLTIRRVRKEDEGLYTCQACSVLGCAKVE 93 (108)
T ss_dssp CCEEEECBCC----CCEEEEE-SSSBCC--------CBTTEEEETT---TTEEEECSCCGGGCEEEEEEEC----CEEEE
T ss_pred CeEEEEEECcCcCCCeEEEEE-CCeEcc--------cCCCeEEeCC---CcEEEEeecCcccCEEEEEEEEeCCCceEEE
Confidence 468889999999999999999 444432 1222332221 238999999999999999999765 555666
Q ss_pred EEEEEEcCCc
Q psy16425 82 GYLEVVVPPD 91 (163)
Q Consensus 82 ~~l~v~~~p~ 91 (163)
+.|.|..+|.
T Consensus 94 ~~l~V~~~~~ 103 (108)
T 3kvq_A 94 AFFIIEGAQE 103 (108)
T ss_dssp EEEEEEC---
T ss_pred EEEEEeCCCc
Confidence 7788877654
No 271
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.22 E-value=8.6e-11 Score=68.31 Aligned_cols=73 Identities=12% Similarity=0.165 Sum_probs=49.3
Q ss_pred ceeEEEeeeeccCCCEEEEEEcC-CceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVD-TQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQ 80 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~ 80 (163)
..+.|.|...+.|.|.|.|++.+ +..+. ...++... .....|.|.+++.+|+|.|+|.+.|. +....
T Consensus 18 ~~~~l~C~~~g~P~p~i~W~k~~~~~~~~--------~~~~~~~~---~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~ 86 (93)
T 1wit_A 18 FTHNLEVDFIGAPDPTATWTVGDSGAALA--------PELLVDAK---SSTTSIFFPSAKRADSGNYKLKVKNELGEDEA 86 (93)
T ss_dssp BCCEEEEEEECCSSCEEEEECSTTTCBCS--------TTSEEEEE---TTEEEEECTTBCGGGCEEEEEEEEETTEEEEE
T ss_pred CEEEEEEEEEEcCCCEEEEEECCCCcccC--------CcEEEEec---CCEEEEEECCCChhcCEEEEEEEEcCCCeEEE
Confidence 46788999999999999999944 14431 11111111 23358999999999999999999776 33333
Q ss_pred eEEEEE
Q psy16425 81 VGYLEV 86 (163)
Q Consensus 81 ~~~l~v 86 (163)
.+.|.|
T Consensus 87 ~~~l~V 92 (93)
T 1wit_A 87 IFEVIV 92 (93)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 344443
No 272
>3c6l_A TCR 2W20 alpha chain; TCR-PMHC complex; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.86 E-value=9.5e-13 Score=86.44 Aligned_cols=126 Identities=14% Similarity=0.205 Sum_probs=76.2
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCC-c---eE-EeeeeeEEecCCeEEEEeC-CCceEEEEEcccCCCCCeEEEEEEEeC-
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDT-Q---TI-LTIQTHVITKNHRIGVTHS-ETKAWYLHIREVRESDRGWYMCQVNTD- 75 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~-~---~~-~~~~~~~~~~~~r~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~~~~~- 75 (163)
..+.|.|...+.+.+.|.||+... . .+ +..........+|+.+..+ ..+.++|.|.+++.+|+|.|.|.+.+.
T Consensus 16 ~svtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~R~s~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~ 95 (185)
T 3c6l_A 16 ETAILNCSYEDSTFDYFPWYHQFPGESPALLIAIRPVSNKKEDGRFTIFFNKREKKFSLHIADSQPGDSATYFCAASDNR 95 (185)
Confidence 467788887666656899998531 1 11 1111111123567766543 235678999999999999999998542
Q ss_pred CCceEeEEEEEEcC-----CcccccCCCCcEEEeCCCcEEEEeEecc-CCCCeEEEEECCeEEEec
Q psy16425 76 PMKSQVGYLEVVVP-----PDILDYPTSTDMVIREGSNVTLKCAASG-SPKPNITWRREGGELIAQ 135 (163)
Q Consensus 76 ~~~~~~~~l~v~~~-----p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p~v~W~~~~~~~~~~ 135 (163)
........|.|... |.+.... ...+.+.|.|.+.| +|.|.|.|.........+
T Consensus 96 ~~fg~gT~L~V~~~~~~~~P~V~~~~-------~~~~~vtL~C~~~gf~P~p~v~~~~~~~~~~~~ 154 (185)
T 3c6l_A 96 IFFGDGTQLVVKPNIQNPEPAVYQLK-------DPRSQDSTLCLFTDFDSQINVPKTMESGTFITD 154 (185)
Confidence 11222334555432 2221111 11227899999987 789999998766555433
No 273
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.22 E-value=4.4e-11 Score=69.54 Aligned_cols=60 Identities=15% Similarity=0.282 Sum_probs=44.1
Q ss_pred eeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEe
Q psy16425 4 RMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNT 74 (163)
Q Consensus 4 ~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~ 74 (163)
++.|.|...+ |.+.|.|+| ++..+. ...++.+...+ +..+|.|.+++.+|+|.|+|.+.|
T Consensus 23 ~v~l~C~v~~-p~~~v~W~k-~g~~i~--------~~~~~~i~~~~-~~~~L~I~~v~~~D~G~Y~C~a~n 82 (91)
T 2lvc_A 23 CVMLACEVDR-EDAPVRWYK-DGQEVE--------ESDFVVLENEG-PHRRLVLPATQPSDGGEFQCVAGD 82 (91)
T ss_dssp CEEEEEECSC-TTSCCEEEE-TTSCCC--------CCSSCEEEEET-TEEEEEESSCCGGGCSEEEEECSS
T ss_pred cEEEEEEECC-CCcEEEEEE-CCEEee--------eeeeeeEEecC-CeEEEEeCCCChhhcEEEEEEEcc
Confidence 5778887654 888999999 666652 23445544433 345899999999999999999844
No 274
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.21 E-value=8.9e-11 Score=73.56 Aligned_cols=83 Identities=14% Similarity=0.210 Sum_probs=52.3
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceE-------------------EeeeeeEE-ecCCeEEEEeCCCceEEEEEcccCC
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTI-------------------LTIQTHVI-TKNHRIGVTHSETKAWYLHIREVRE 62 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~-------------------~~~~~~~~-~~~~r~~~~~~~~~~~~L~i~~v~~ 62 (163)
..+.|.|...+.|.|.|.|++.+.... ...+...+ ....|+.+...+ ....|.|.+++.
T Consensus 34 ~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~-~~s~L~I~~v~~ 112 (139)
T 1gxe_A 34 NKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTK-DRSIFTVEGAEK 112 (139)
T ss_dssp SCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEET-TEEEEECSCCCT
T ss_pred CeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCC-CEEEEEECCCCc
Confidence 367889999999999999999551000 00000001 123455544332 235799999999
Q ss_pred CCCeEEEEEEEeC-CCceEeEEEEE
Q psy16425 63 SDRGWYMCQVNTD-PMKSQVGYLEV 86 (163)
Q Consensus 63 ~d~G~Y~C~~~~~-~~~~~~~~l~v 86 (163)
+|+|.|+|.+.|. +.....+.|.|
T Consensus 113 ~DsG~Y~C~A~N~~G~~~~~~~L~V 137 (139)
T 1gxe_A 113 EDEGVYTVTVKNPVGEDQVNLTVKV 137 (139)
T ss_dssp TTCEEEEEEEECSSCEEEEEEEEEE
T ss_pred ccCEEEEEEEEeCCceEEEEEEEEE
Confidence 9999999999776 43334444443
No 275
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.21 E-value=2e-12 Score=86.65 Aligned_cols=124 Identities=16% Similarity=0.150 Sum_probs=73.5
Q ss_pred ceeEEEeeeeccCC---CEEEEEEcCCceEEeeeee-EEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCc
Q psy16425 3 ARMLIEIGEMLMAE---STVAWLRVDTQTILTIQTH-VITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMK 78 (163)
Q Consensus 3 ~~~~~~~~~~~~~~---~~i~W~k~~~~~~~~~~~~-~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~ 78 (163)
.++.|.|...+.++ +.|.| + +.......... .....+++. ....|.|.+++.+|+|.|+|.+.+....
T Consensus 20 ~~v~L~C~~~g~~p~~~~~v~W-~-~~~~~~~~~~~~~~~~~g~~~------~~~~L~I~~~~~~D~g~Y~C~~~~~~~~ 91 (214)
T 1ow0_A 20 SEANLTCTLTGLRDASGVTFTW-T-PSSGKSAVQGPPERDLCGCYS------VSSVLPGCAEPWNHGKTFTCTAAYPESK 91 (214)
T ss_dssp SSCCCEEEETTCCSCCCCCCCB-S-SCSSCCCEECCCCCCSTTCCC------EEEECTTTHHHHHHTCEEEEEECCSSCS
T ss_pred CCcEEEEEEeeeECCCCeEEEE-c-CCCCCCcccCCceECCCCcEE------EEEEEEEeHHHcCCCCeEEEEEecCCCC
Confidence 35778888877654 68999 4 33221100000 001112211 2347899999999999999999665322
Q ss_pred -eEeEEEE---EEcCCcccccCCCCcEEEeCCCcEEEEeEeccC-CC-CeEEEEECCeEEEec
Q psy16425 79 -SQVGYLE---VVVPPDILDYPTSTDMVIREGSNVTLKCAASGS-PK-PNITWRREGGELIAQ 135 (163)
Q Consensus 79 -~~~~~l~---v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-p~v~W~~~~~~~~~~ 135 (163)
.....+. +..+|.+...+.. ...+.+|+.+.|.|.+.|. |+ +.+.|++++..+...
T Consensus 92 ~~~~~~i~~~~~~~~P~v~~~~~~-~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~ 153 (214)
T 1ow0_A 92 TPLTATLSKSGNTFRPEVHLLPPP-SEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPRE 153 (214)
T ss_dssp SCEEEEEECCSSCCCCEEEEECCC-TTTTTSSSEEEEEEEEEEESSSCCEEEEEETTEECCGG
T ss_pred CceeEeeccCCCCCCCEEEecCCC-HHHhccCCceEEEEEEeeeECCCcEEEEEECCEECCCC
Confidence 2223332 2345554332221 1224578889999999984 54 489999999876443
No 276
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.21 E-value=2.2e-10 Score=67.47 Aligned_cols=74 Identities=18% Similarity=0.164 Sum_probs=53.2
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCceEeE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKSQVG 82 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~ 82 (163)
..+.|.|... .|.+.|.||+ ++..+. ...++.+...+ ....|.|.+++.+|+|.|+|.+ +.....+
T Consensus 24 ~~v~l~C~~~-~p~~~v~W~k-~g~~i~--------~~~~~~~~~~~-~~~~L~I~~~~~~D~G~Y~C~a---g~~~~~~ 89 (100)
T 2yuv_A 24 GRVRFVVELA-DPKLEVKWYK-NGQEIR--------PSTKYIFEHKG-CQRILFINNCQMTDDSEYYVTA---GDEKCST 89 (100)
T ss_dssp EEEEEEEEES-CTTSCEEEEE-SSCBCC--------CBTTEEEEEET-TEEEEEEEEECTTTCCEEEEEE---TTEEEEE
T ss_pred CcEEEEEEec-CCCceEEEEE-CCEECC--------CCCCEEEEecC-CEEEEEEcCCCcCcCEEEEEEE---CCceEEE
Confidence 3577888877 6899999999 555442 23345544333 2347999999999999999999 4455667
Q ss_pred EEEEEcCC
Q psy16425 83 YLEVVVPP 90 (163)
Q Consensus 83 ~l~v~~~p 90 (163)
.|.|..+|
T Consensus 90 ~l~V~~~P 97 (100)
T 2yuv_A 90 ELFVRSGP 97 (100)
T ss_dssp EEEECCSC
T ss_pred EEEEecCC
Confidence 77777665
No 277
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.19 E-value=1e-10 Score=69.25 Aligned_cols=76 Identities=24% Similarity=0.319 Sum_probs=54.7
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCceEeE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKSQVG 82 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~ 82 (163)
..+.|.|...+ |.+.|.|++ ++..+ ....++.+...+ ....|.|.+++.+|+|.|+|.+.+ ....+
T Consensus 24 ~~v~l~C~~~~-~~~~v~W~k-~g~~~--------~~~~~~~~~~~~-~~~~L~I~~v~~~D~G~Y~C~a~n---~~~~~ 89 (103)
T 2edf_A 24 EDVELRCELSR-AGTPVHWLK-DRKAI--------RKSQKYDVVCEG-TMAMLVIRGASLKDAGEYTCEVEA---SKSTA 89 (103)
T ss_dssp SCEEECCEESS-SSCCCCEEE-SSCBC--------CCSSSEEEEEET-TEEEEEESSCCTTTCSEEEEECSS---CEEEE
T ss_pred CCEEEEEEEeC-CCCcEEEEE-CCEEc--------cCCCCEEEEECC-CEEEEEECCCCcccCEEEEEEEcc---CCcEE
Confidence 35778888876 788999999 55544 223455555433 245799999999999999999966 35667
Q ss_pred EEEEEcCCcc
Q psy16425 83 YLEVVVPPDI 92 (163)
Q Consensus 83 ~l~v~~~p~~ 92 (163)
.|.|..+|..
T Consensus 90 ~l~V~~~p~~ 99 (103)
T 2edf_A 90 SLHVEEKASG 99 (103)
T ss_dssp EEEECCCSSS
T ss_pred EEEEeCCCCC
Confidence 7787776643
No 278
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.19 E-value=5.5e-10 Score=78.02 Aligned_cols=117 Identities=16% Similarity=0.227 Sum_probs=72.7
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcc-cCCCCCeEEEEEEEeC-CCceE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIRE-VRESDRGWYMCQVNTD-PMKSQ 80 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~-v~~~d~G~Y~C~~~~~-~~~~~ 80 (163)
..+.|.|...+.|.+.|.|++ ++..+ ....++...... ...+|.|.+ ++.+|+|.|+|.+.|. +....
T Consensus 120 ~~~~l~C~~~g~p~p~i~W~~-~~~~~--------~~~~~~~~~~~~-~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~ 189 (305)
T 2nzi_A 120 EVVSIKIPFSGKPDPVITWQK-GQDLI--------DNNGHYQVIVTR-SFTSLVFPNGVERKDAGFYVVCAKNRFGIDQK 189 (305)
T ss_dssp CCEEEEEEEEEESCCEEEEEE-SSSBC--------CSSSSCEEEECS-SEEEEEETTCCCSTTCEEEEEEEEETTEEEEE
T ss_pred CEEEEEEEECCCCCCEEEEEE-CCEEC--------CCCCcEEEEEcC-CceEEEEecCCccCccEEEEEEEEeCCCceee
Confidence 357888999999999999999 55444 223344433222 234899999 9999999999999776 44455
Q ss_pred eEEEEEEcCCcccccC-----CCCcEEE------eCCCcEEEEeEeccCCCCeEEEEECC
Q psy16425 81 VGYLEVVVPPDILDYP-----TSTDMVI------REGSNVTLKCAASGSPKPNITWRREG 129 (163)
Q Consensus 81 ~~~l~v~~~p~~~~~~-----~~~~~~~------~~g~~~~l~C~~~~~p~p~v~W~~~~ 129 (163)
.+.|.+...|...... ......+ ..|....+.|.+...+.+...|...+
T Consensus 190 ~~~l~v~~~P~~p~~~~~~~~~~~~v~l~w~~p~~~g~~~i~~y~v~~~~~~~~~w~~~~ 249 (305)
T 2nzi_A 190 TVELDVADVPDPPRGVKVSDVSRDSVNLTWTEPASDGGSKITNYIVEKCATTAERWLRVG 249 (305)
T ss_dssp EEEEEEEBCCCCCEEEEEESCCSSCEEEEEECCSCCSBSCEEEEEEEEEETTSCCEEEEE
T ss_pred EEEEEEecCCCCCCCceeeeccCCEEEEEEcCCccCCCCceeEEEEEEecCCCCccEECc
Confidence 5667777655422110 0011111 12344455666666666667777654
No 279
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=99.19 E-value=8.6e-10 Score=76.25 Aligned_cols=125 Identities=17% Similarity=0.322 Sum_probs=74.5
Q ss_pred ceeEEEeeeec--cCCCEEEEEEcCC-ce---EEeee------eeEEecCCeEEEEeCC-CceEEEEEcccCCCCCeEEE
Q psy16425 3 ARMLIEIGEML--MAESTVAWLRVDT-QT---ILTIQ------THVITKNHRIGVTHSE-TKAWYLHIREVRESDRGWYM 69 (163)
Q Consensus 3 ~~~~~~~~~~~--~~~~~i~W~k~~~-~~---~~~~~------~~~~~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~ 69 (163)
..+.|.|...+ .....+.||+... .. +.... .......+|+.+..+. .++++|.|.+++.+|+|.|.
T Consensus 39 ~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~ 118 (267)
T 3u1s_H 39 SSVKVSCKASGNSFSNHDVHWVRQATGQGLEWMGWMSHEGDKTGLAQKFQGRVTITRDSGASTVYMELRGLTADDTAIYY 118 (267)
T ss_dssp CCEEEEEEEGGGGGGTSEEEEEEECTTSCCEEEEEECTTSSCEEECGGGTTTEEEEECGGGCCEEEEECSCCGGGCEEEE
T ss_pred CcEEEEEEeeCCccCCCEEEEEEECCCCCcEEEEEEeCCCCceecCcccCCcEEEEEcCCCCEEEEEECCCChhhCEEEE
Confidence 46788887643 3457899998632 11 11111 0111235788877655 36789999999999999999
Q ss_pred EEEEe-------CC-------------------CceEeEEEEEEc----CCcccccCCCCcEEEeCCCcEEEEeEecc-C
Q psy16425 70 CQVNT-------DP-------------------MKSQVGYLEVVV----PPDILDYPTSTDMVIREGSNVTLKCAASG-S 118 (163)
Q Consensus 70 C~~~~-------~~-------------------~~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~ 118 (163)
|.+.+ .+ .......|.|.. +|.+...++.. ...+|+.+.|.|.+.+ .
T Consensus 119 C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~l~V~~~~~~~P~v~~~~~~~--~~~~g~~~~l~C~~~~~~ 196 (267)
T 3u1s_H 119 CLTGSKHRLRDYFLYNEYGPNYEEWGDYLATLDVWGHGTAVTVSSASTKGPSVFPLAPSS--KSTSGGTAALGCLVKDYF 196 (267)
T ss_dssp EEEEEEEEEEEEEECCTTSSCEEEEEEEEEEEEEECCCEEEEECCCCCBCCEEEEECCCG--GGEETTEEEEEEEEEEEB
T ss_pred EEECcCCcccccccccccccccccccccccccceecCCeEEEecCCCCCCCEEEEecCCc--ccCCCCcEEEEEEEeEEE
Confidence 99851 11 011123455542 23332212111 1246899999999986 5
Q ss_pred C-CCeEEEEECCeE
Q psy16425 119 P-KPNITWRREGGE 131 (163)
Q Consensus 119 p-~p~v~W~~~~~~ 131 (163)
| .+.+.| ++..
T Consensus 197 p~~~~v~W--~~~~ 208 (267)
T 3u1s_H 197 PEPVTVSW--NSGA 208 (267)
T ss_dssp SSCCEEEE--GGGT
T ss_pred CCCeEEEE--CCcc
Confidence 6 457999 5543
No 280
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=99.18 E-value=1.6e-10 Score=69.59 Aligned_cols=82 Identities=16% Similarity=0.225 Sum_probs=55.2
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCc----eEEee------eeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQ----TILTI------QTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQV 72 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~----~~~~~------~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~ 72 (163)
.+++|.|...+.+...+.|||.... .+... ........+|..+..++ +|.|.+++.+|+|.|+|.+
T Consensus 16 ~~v~L~~~~~p~~~~~i~W~kg~~~~~~~~I~~y~~~~~~~~~~~~~~gR~~~~~ng----SL~I~nvt~~D~G~Ytc~v 91 (111)
T 2qsq_A 16 KEVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPNA----SLLIQNIIQNDAGFYTLHV 91 (111)
T ss_dssp SCEEEEEESCCSSEEEEEEEESSSCCGGGEEEEEETTTTEEEECTTCCSCEEECTTS----CEEECSCCGGGCEEEEEEE
T ss_pred CCEEEEEeCCCCCceEEEEEeCCCCCCCcEEEEEECCCcceecCcccCCcEEEecCC----cEEEccCcccCCeEEEEEE
Confidence 4789999876666678999994321 12111 01111246788887766 9999999999999999999
Q ss_pred EeCCC--ceEeEEEEEEc
Q psy16425 73 NTDPM--KSQVGYLEVVV 88 (163)
Q Consensus 73 ~~~~~--~~~~~~l~v~~ 88 (163)
.+... ....+.|.|..
T Consensus 92 ~~~~~~~~~~~~~L~V~~ 109 (111)
T 2qsq_A 92 IKSDLVNEEATGQFRVYP 109 (111)
T ss_dssp EETTSCCEEEEEEEEEEC
T ss_pred EeCCCcEEEEEEEEEEec
Confidence 76632 34445565553
No 281
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.18 E-value=6.5e-10 Score=68.26 Aligned_cols=80 Identities=15% Similarity=0.233 Sum_probs=51.8
Q ss_pred ceeEEEeeeec---cCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeC--C---CceEEEEEcccCCCCCeEEEEEEEe
Q psy16425 3 ARMLIEIGEML---MAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHS--E---TKAWYLHIREVRESDRGWYMCQVNT 74 (163)
Q Consensus 3 ~~~~~~~~~~~---~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~--~---~~~~~L~i~~v~~~d~G~Y~C~~~~ 74 (163)
.++.|.|...+ .|.|.|.||| ++...... ....++.+... . ..+++|.|.+++..|+|.|+|++.+
T Consensus 23 ~~v~L~C~v~g~~~~p~P~V~W~K-gk~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DaG~Y~Cevsn 96 (126)
T 2dav_A 23 EDITFIAKVKAEDLLRKPTIKWFK-GKWMDLAS-----KAGKHLQLKETFERHSRVYTFEMQIIKAKDNFAGNYRCEVTY 96 (126)
T ss_dssp CCEEEEEEEECCCSSSCCEEEEEE-SSSCCHHH-----HTTSSEEEEEEEETTTTEEEEEEEECSCCTTSCEEEEEEEEC
T ss_pred CCEEEEEEEeccCCCCCCcEEEee-CcCcccCC-----CCCceEEEccccccccccceEEEEEccCCcccCEEEEEEEEe
Confidence 35778887655 3899999999 43111000 00122222110 0 1245899999999999999999977
Q ss_pred C-CCceEeEEEEEEc
Q psy16425 75 D-PMKSQVGYLEVVV 88 (163)
Q Consensus 75 ~-~~~~~~~~l~v~~ 88 (163)
. +..+..+.|.|.+
T Consensus 97 ~~g~~~~~~~L~V~~ 111 (126)
T 2dav_A 97 KDKFDSCSFDLEVHE 111 (126)
T ss_dssp SSCEEEECCEEEEEC
T ss_pred CCCcEEEEEEEEEEe
Confidence 6 4556778899988
No 282
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.18 E-value=3.3e-10 Score=66.40 Aligned_cols=76 Identities=14% Similarity=0.228 Sum_probs=53.6
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.|.|...+.|.+.|.|++ ++..+.. ....++.+.... ...+|.|.+++.+|+|.|+|.+.|. +.....
T Consensus 21 ~~~~l~C~~~g~p~p~v~W~~-~~~~~~~------~~~~~~~~~~~~-~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~ 92 (100)
T 3irg_A 21 KVLTVACAFTGEPTPEVTWSC-GGRKIHS------QEQGRFHIENTD-DLTTLIIMDVQKQDGGLYTLSLGNEFGSDSAT 92 (100)
T ss_dssp SEEEEEEEEEEESCCEEEEEE-TTEECCT------TGGGTEEEEECS-SEEEEEESSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEEEcCCCceEEEE-CCEEeec------CCCCEEEEEecC-CEEEEEEeecCcccCEEEEEEEEeCCCcEEEE
Confidence 468889999999999999999 5544321 123455555432 3458999999999999999999776 333444
Q ss_pred EEEEE
Q psy16425 82 GYLEV 86 (163)
Q Consensus 82 ~~l~v 86 (163)
+.|.|
T Consensus 93 ~~l~V 97 (100)
T 3irg_A 93 VNIHI 97 (100)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 44544
No 283
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.18 E-value=4.6e-10 Score=84.37 Aligned_cols=121 Identities=13% Similarity=0.088 Sum_probs=73.4
Q ss_pred ceeEEEeeeeccCC--CEEEEEEcCCceEE-eee--eeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCC
Q psy16425 3 ARMLIEIGEMLMAE--STVAWLRVDTQTIL-TIQ--THVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPM 77 (163)
Q Consensus 3 ~~~~~~~~~~~~~~--~~i~W~k~~~~~~~-~~~--~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~ 77 (163)
..+.|.|...+..+ ..|.|++ ++..+. ... ......++.+... ..|.|..+...|.|.|+|.+.+...
T Consensus 313 ~~~~L~C~v~g~~P~~~~i~W~k-~g~~~~~~~~~~~~~~~~~gt~~~~------s~L~i~~~~~~d~g~y~C~a~n~~~ 385 (512)
T 1zvo_C 313 DKATFTCFVVGSDLKDAHLTWEV-AGKVPTGGVEEGLLERHSNGSQSQH------SRLTLPRSLWNAGTSVTCTLNHPSL 385 (512)
T ss_pred CceEEEEEEeceECCCeEEEEEE-CCEeccCceeccceecCCCCeEEEE------EEEEEchHHhcCCCeEEEEEEeCCC
Confidence 35777888766533 4999999 554432 110 0111122333322 2699999999999999999977632
Q ss_pred ceEeEEEEE------EcCCcccccCCCCcEEEeCCCcEE-EEeEeccCCCC--eEEEEECCeEEEec
Q psy16425 78 KSQVGYLEV------VVPPDILDYPTSTDMVIREGSNVT-LKCAASGSPKP--NITWRREGGELIAQ 135 (163)
Q Consensus 78 ~~~~~~l~v------~~~p~~~~~~~~~~~~~~~g~~~~-l~C~~~~~p~p--~v~W~~~~~~~~~~ 135 (163)
......+.. ..+|.+...+.. . +|+.+. |.|.+.|++++ .+.|+++|..+...
T Consensus 386 ~~~~~~~~~~~~~~~~~~p~v~~~~~~-~----~~~~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~ 447 (512)
T 1zvo_C 386 PPQRLMALREPAAQAPVKLSLNLLASS-D----PPEAASWLLCEVSGFSPPNILLMWLEDQREVNTS 447 (512)
T ss_pred CCCceeEEeecCCCCCCCCEEEEEccC-c----CCCCceEEEEEEeeeCCCCcEEEEEECCeECcCc
Confidence 221222222 234444333221 1 688899 99999985443 58999999887543
No 284
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.18 E-value=9.2e-10 Score=72.05 Aligned_cols=79 Identities=23% Similarity=0.381 Sum_probs=60.5
Q ss_pred EEEEcccCCCCCeEEEEEEEeC-CCceEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEecc-CCCC--eEEEEECC
Q psy16425 54 YLHIREVRESDRGWYMCQVNTD-PMKSQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASG-SPKP--NITWRREG 129 (163)
Q Consensus 54 ~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p--~v~W~~~~ 129 (163)
.|.|.+++. | |.|.|.+... ......+.|.|..+|........ ...+.+|+.++|.|.+.| .|.+ .|+|++++
T Consensus 51 ~l~l~~vs~-~-g~y~C~~~c~~~~~~~~~~l~V~~~P~~v~i~~~-~~~~~~G~~~tL~C~v~g~~P~~~l~i~w~kg~ 127 (185)
T 1iam_A 51 VYELSNVQE-D-SQPMCYSNCPDGQSTAKTFLTVYWTPERVELAPL-PSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGE 127 (185)
T ss_dssp EEEEEEECS-C-BCCEEEEECSSCEEEEECEEEEEBCCSEEEECCC-CSEECTTSEEEEEEEEECCBCGGGEEEEEEETT
T ss_pred EEEEEecCc-C-CEEEEEEECCCCceEEEEEEEEeCCCCCCEEccC-CccccCCCcEEEEEEcCCccCCCCcEEEEEeCC
Confidence 689999983 4 9999999655 34456678889888876555443 345889999999999987 5654 48999999
Q ss_pred eEEEec
Q psy16425 130 GELIAQ 135 (163)
Q Consensus 130 ~~~~~~ 135 (163)
..+...
T Consensus 128 ~~l~~~ 133 (185)
T 1iam_A 128 KELKRE 133 (185)
T ss_dssp EEEEEE
T ss_pred EEcccc
Confidence 988653
No 285
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.18 E-value=2.4e-10 Score=67.66 Aligned_cols=75 Identities=17% Similarity=0.252 Sum_probs=53.6
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCC--eEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCceE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNH--RIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKSQ 80 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~--r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~ 80 (163)
.++.|.|...+ +.+.|.|++ ++..+. ... ++.+...+ ....|.|.+++.+|+|.|+|.+.+ ...
T Consensus 23 ~~v~l~C~~~~-~~~~v~W~k-~g~~l~--------~~~~~~~~~~~~~-~~~~L~I~~~~~~D~G~Y~C~a~n---~~~ 88 (103)
T 1x44_A 23 ERVELECEVSE-DDANVKWFK-NGEEII--------PGPKSRYRIRVEG-KKHILIIEGATKADAAEYSVMTTG---GQS 88 (103)
T ss_dssp EEEEEEEECSS-SSCCCEEEE-TTEECC--------CSTTCSEEEEEET-TEEEEEEEEECTTTCSEEEEEETT---EEE
T ss_pred CCEEEEEEecC-CCCeEEEEE-CCEECC--------CCCceEEEEEEcC-CEEEEEECCCCcccCEEEEEEECC---CcE
Confidence 36778888866 779999999 555442 222 44554432 345899999999999999999955 466
Q ss_pred eEEEEEEcCCc
Q psy16425 81 VGYLEVVVPPD 91 (163)
Q Consensus 81 ~~~l~v~~~p~ 91 (163)
.+.|.|..+|.
T Consensus 89 ~~~l~V~~~p~ 99 (103)
T 1x44_A 89 SAKLSVDLKSG 99 (103)
T ss_dssp EEEEEEECCCS
T ss_pred EEEEEEeCCCC
Confidence 67788877654
No 286
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.18 E-value=1.5e-10 Score=67.55 Aligned_cols=68 Identities=18% Similarity=0.337 Sum_probs=48.2
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.|.|...+.| +.|.|++ ++..+. ...++... .+ .|.|.+++.+|+|.|+|.+.|. +.....
T Consensus 25 ~~v~l~C~~~g~p-p~i~W~k-~g~~~~--------~~~~~~~~-~~----~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~ 89 (95)
T 2ckn_A 25 DLLQLRCRLRDDV-QSINWLR-DGVQLV--------ESNRTRIT-GE----EVEVRDSIPADSGLYACVTSSPSGSDTTY 89 (95)
T ss_dssp SCEEEECCEESSC-CEEEEEB-TTBCCC--------CCSSEEEC-SS----EEEESSCCGGGSEEEEEEEEETTEEEEEE
T ss_pred CeEEEEEECCCCC-CceEEEE-CCEecC--------CCCCEEEe-CC----EEEECCCChHHCEEEEEEeccCCCcEEEE
Confidence 3678889888887 7999999 565542 23444443 22 8999999999999999999776 333333
Q ss_pred EEEE
Q psy16425 82 GYLE 85 (163)
Q Consensus 82 ~~l~ 85 (163)
+.|.
T Consensus 90 ~~l~ 93 (95)
T 2ckn_A 90 FSVN 93 (95)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 3443
No 287
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.17 E-value=1.5e-10 Score=70.34 Aligned_cols=77 Identities=17% Similarity=0.129 Sum_probs=51.0
Q ss_pred eEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEE--eCC-CceEEEEEcccCCCCCeEEEEEEEeC-CCceE
Q psy16425 5 MLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVT--HSE-TKAWYLHIREVRESDRGWYMCQVNTD-PMKSQ 80 (163)
Q Consensus 5 ~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~--~~~-~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~ 80 (163)
..+.|...+.|.+.|.|++ ++..+.. ..+.... ... ....+|.|.+++.+|+|.|+|.+.|. +....
T Consensus 23 ~~l~C~~~g~P~p~i~W~k-~g~~l~~--------~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~ 93 (118)
T 1wwc_A 23 HCIEFVVRGNPPPTLHWLH-NGQPLRE--------SKIIHVEYYQEGEISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQ 93 (118)
T ss_dssp EEEEEEEECSSCCEEEEEE-TTEECCC--------SSSEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEEETTEEEEE
T ss_pred eEEEEEeeeeCCCeEEEEE-CCEECCC--------CCceeEEEeccCccccEEEEECCCChhcCEEEEEEEECCCCeEee
Confidence 4567888999999999999 5554421 1222211 111 12348999999999999999999776 33444
Q ss_pred eEEEEEEcCC
Q psy16425 81 VGYLEVVVPP 90 (163)
Q Consensus 81 ~~~l~v~~~p 90 (163)
.+.|.+...|
T Consensus 94 ~~~l~v~~~P 103 (118)
T 1wwc_A 94 TINGHFLKEP 103 (118)
T ss_dssp EEEECCSCCC
T ss_pred EEEEEEccCC
Confidence 4555555554
No 288
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.16 E-value=4.7e-11 Score=71.28 Aligned_cols=74 Identities=23% Similarity=0.240 Sum_probs=53.5
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.|.|...+.|.+.|.|++ ++..+ ....++...... ...+|.|.+++.+|+|.|+|.+.|. +.....
T Consensus 30 ~~v~L~C~~~g~p~p~v~W~k-~g~~l--------~~~~~~~~~~~~-~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~ 99 (106)
T 1nct_A 30 ESARFSCDTDGEPVPTVTWLR-KGQVL--------STSARHQVTTTK-YKSTFEISSVQASDEGNYSVVVENSEGKQEAE 99 (106)
T ss_dssp SCEECCEEEECSSCCBCCBCS-SSSCC--------TTCSSEEEEECS-SEEEEEECCCCSSCCSEEEECCBCSSCBCCEE
T ss_pred CcEEEEEEEEEcCCCEEEEEE-CCEEC--------CCCCCEEEEECC-CEEEEEECcCCchhCEEEEEEEEeCCCeEEEE
Confidence 367888999999999999999 55443 233455544422 3458999999999999999999766 444455
Q ss_pred EEEEE
Q psy16425 82 GYLEV 86 (163)
Q Consensus 82 ~~l~v 86 (163)
+.|.|
T Consensus 100 ~~l~V 104 (106)
T 1nct_A 100 FTLTI 104 (106)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55554
No 289
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.16 E-value=3.7e-10 Score=65.84 Aligned_cols=71 Identities=14% Similarity=0.103 Sum_probs=49.3
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCceEeE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKSQVG 82 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~ 82 (163)
..+.+.|...+ +.+.|.|+| ++..+. ...|+.+...+ ...+|.|.+++.+|+|.|+|.+.|. ...+
T Consensus 21 ~~v~l~C~v~~-~~~~v~W~k-~g~~i~--------~~~~~~i~~~g-~~~~L~I~~v~~~D~G~Y~C~a~n~---~~sa 86 (93)
T 1waa_A 21 ETAHFEIELSE-PDVHGQWKL-KGQPLA--------ASPDCEIIEDG-KKHILILHNCQLGMTGEVSFQAANT---KSAA 86 (93)
T ss_dssp SCEEEEEEESS-SSCCCEEEE-TTEECC--------CBTTEEEEEET-TEEEEEECSCCGGGCEEEEEEETTE---EEEE
T ss_pred CCEEEEEEECC-CCCeEEEEE-CCEECc--------CCCCEEEEEEC-CEEEEEECCCChhhCEEEEEEECCC---cEEE
Confidence 35777887765 557899999 666552 23455554433 3458999999999999999999542 3455
Q ss_pred EEEEE
Q psy16425 83 YLEVV 87 (163)
Q Consensus 83 ~l~v~ 87 (163)
.|.|.
T Consensus 87 ~L~V~ 91 (93)
T 1waa_A 87 NLKVK 91 (93)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66665
No 290
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.16 E-value=4.5e-10 Score=65.45 Aligned_cols=72 Identities=18% Similarity=0.328 Sum_probs=49.4
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.|.|...+ .|.|.|++ ++..+ ....++.... + +|.|.+++.+|+|.|+|.+.+. +.....
T Consensus 17 ~~~~l~C~~~~--~p~v~W~k-~g~~~--------~~~~~~~~~~-~----~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~ 80 (95)
T 4hwu_A 17 ESLELQCMLKD--AAVISWTK-DGVHL--------GPNNRTVLIG-E----YLQIKGATPRDSGLYACTAARTVDSETWI 80 (95)
T ss_dssp SCEEEECCCCT--TCEEEEEE-TTEEE--------CCCSSEEEET-T----EEEECSCCGGGCEEEEEEEECSSCEEEEE
T ss_pred CEEEEEEEeCC--CCEEEEEE-CCEEC--------CCCceEEEeC-C----EEEECcCCcccCEEEEEEEccCCCcEEEE
Confidence 46788888775 57999999 55554 2234554432 2 8999999999999999999765 433444
Q ss_pred EEEEEEcCC
Q psy16425 82 GYLEVVVPP 90 (163)
Q Consensus 82 ~~l~v~~~p 90 (163)
+.|.|..++
T Consensus 81 ~~l~V~~~~ 89 (95)
T 4hwu_A 81 FMVNVTDAA 89 (95)
T ss_dssp EEEEECCC-
T ss_pred EEEEEeCCc
Confidence 555555443
No 291
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.16 E-value=2.4e-10 Score=68.77 Aligned_cols=77 Identities=18% Similarity=0.344 Sum_probs=55.4
Q ss_pred eeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCceEeEE
Q psy16425 4 RMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKSQVGY 83 (163)
Q Consensus 4 ~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~ 83 (163)
++.|.|... .|.+.+.|++ ++..+. ...++.+...+ ....|.|.+++.+|+|.|+|.+.+ ....+.
T Consensus 30 ~v~L~C~~~-~p~~~v~W~k-~g~~~~--------~~~~~~~~~~~-~~~~L~I~~v~~~D~G~Y~C~a~n---~~~~~~ 95 (113)
T 2cpc_A 30 RVVLTCELC-RPWAEVRWTK-DGEEVV--------ESPALLLQKED-TVRRLVLPAVQLEDSGEYLCEIDD---ESASFT 95 (113)
T ss_dssp CEEEEEEES-CTTCCCEEEE-TTEECC--------CBTTBEEEECS-SEEEEEESSCCTTTCEEEEEESSS---CEEEEE
T ss_pred eEEEEEEec-CCCCeEEEEE-CCEECc--------cCCCEEEEECC-CEEEEEECCCCcccCEEEEEEEec---CcEEEE
Confidence 567778774 7889999999 555442 22344444332 234899999999999999999966 566778
Q ss_pred EEEEcCCcccc
Q psy16425 84 LEVVVPPDILD 94 (163)
Q Consensus 84 l~v~~~p~~~~ 94 (163)
|.|..+|....
T Consensus 96 l~V~~~p~~~~ 106 (113)
T 2cpc_A 96 VTVTEPPVRII 106 (113)
T ss_dssp EEEECCCCCCC
T ss_pred EEEecCCchhc
Confidence 88888875544
No 292
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.16 E-value=2.5e-10 Score=67.17 Aligned_cols=58 Identities=19% Similarity=0.388 Sum_probs=43.3
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD 75 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 75 (163)
..+.|.|...+.| +.|.|++ ++..+. ...++.+.. . .|.|.+++.+|+|.|+|.+.+.
T Consensus 19 ~~v~L~C~~~g~p-p~i~W~k-~g~~~~--------~~~~~~~~~-~----~L~i~~v~~~D~G~Y~C~a~n~ 76 (99)
T 2cr3_A 19 DLLQLRCRLRDDV-QSINWLR-DGVQLA--------ESNRTRITG-E----EVEVQDSVPADSGLYACVTSSP 76 (99)
T ss_dssp SCEEEECCCCSSC-CEEEEEE-SSSBCC--------CCSSEEECS-S----EEEETTCCTTTCEEEEEEEEET
T ss_pred CcEEEEEEecCCC-CeEEEEE-CCEECC--------CCCcEEEEC-C----EEEEccCCHHHCEEEEEEEEeC
Confidence 3678889888776 7999999 554431 233444432 2 8999999999999999999776
No 293
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.16 E-value=3.6e-11 Score=70.79 Aligned_cols=74 Identities=19% Similarity=0.278 Sum_probs=48.7
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCC-CceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDP-MKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~-~~~~~ 81 (163)
..+.|.|...+.|.+.|.|++ ++..+... .....+.... ...+|.|.+++.+|+|.|+|.+.|.. .....
T Consensus 24 ~~v~l~C~~~g~p~p~v~W~~-~~~~~~~~-----~~~~~~~~~~---~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~ 94 (100)
T 3caf_A 24 NTVKFRCPAGGNPMPTMRWLK-NGKEFKQE-----HRIGGYKVRN---QHWSLIMESVVPSDKGNYTCVVENEYGSINHT 94 (100)
T ss_dssp CCEEEECCEEEESCCEEEEEE-TTEECCGG-----GSTTCCEEEG---GGTEEEECSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CEEEEEEEccccCCCEEEEEE-CCEEcccc-----cccccEEEec---CeEEEEEccCCcCCCEEEEEEEEeCCCEEEEE
Confidence 468899999999999999999 55443211 0011122221 12389999999999999999997763 33333
Q ss_pred EEEE
Q psy16425 82 GYLE 85 (163)
Q Consensus 82 ~~l~ 85 (163)
+.|.
T Consensus 95 ~~l~ 98 (100)
T 3caf_A 95 YHLD 98 (100)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 3443
No 294
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.16 E-value=1.5e-10 Score=68.63 Aligned_cols=75 Identities=17% Similarity=0.250 Sum_probs=53.6
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCceEeE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKSQVG 82 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~ 82 (163)
..+.|.|...+.|.+ |.|++ ++..+. ...++.+...+ ....|.|.+++.+|+|.|+|.+.+. ...+
T Consensus 26 ~~v~l~C~~~~~p~~-v~W~k-~g~~~~--------~~~~~~~~~~~-~~~~L~I~~~~~~D~G~Y~C~a~n~---~~~~ 91 (104)
T 2e6p_A 26 ERVVLTCELSRVDFP-ATWYK-DGQKVE--------ESELLVVKMDG-RKHRLILPEAKVQDSGEFECRTEGV---SAFF 91 (104)
T ss_dssp SCEECCEECSSTTCC-CEEEE-TTEECC--------CBTTBEEEEET-TEEEEEESSCCTTTCEEEEEECSSC---CCCE
T ss_pred CcEEEEEEecCCCCc-cEEee-CCEECC--------CCCCEEEEeCC-CEEEEEECCCChhhCEEEEEEECCc---eEEE
Confidence 357888888888888 99999 555442 22344443322 3458999999999999999999654 3466
Q ss_pred EEEEEcCCc
Q psy16425 83 YLEVVVPPD 91 (163)
Q Consensus 83 ~l~v~~~p~ 91 (163)
.|.|..+|.
T Consensus 92 ~l~V~~~P~ 100 (104)
T 2e6p_A 92 GVTVQDPSG 100 (104)
T ss_dssp EEEEECCCC
T ss_pred EEEEcCCCC
Confidence 788887664
No 295
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.15 E-value=1e-10 Score=69.96 Aligned_cols=79 Identities=18% Similarity=0.249 Sum_probs=50.8
Q ss_pred ceeEEEeeeeccCC---CEEEEEEcCCceEEeeeeeEEecCCeEEEEeC-----CCceEEEEEcccCCCCCeEEEEEEEe
Q psy16425 3 ARMLIEIGEMLMAE---STVAWLRVDTQTILTIQTHVITKNHRIGVTHS-----ETKAWYLHIREVRESDRGWYMCQVNT 74 (163)
Q Consensus 3 ~~~~~~~~~~~~~~---~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~-----~~~~~~L~i~~v~~~d~G~Y~C~~~~ 74 (163)
.++.|.|...+.|. +.|.||| ++...... ....++.+... .....+|.|.+++.+|+|.|+|.+.|
T Consensus 20 ~~v~L~C~~~g~p~~~~p~v~W~k-~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 93 (108)
T 3cx2_A 20 GSITFSARVAGASLLKPPVVKWFK-GKWVDLSS-----KVGQHLQLHDSYDRASKVYLFELHITDAQPAFTGSYRCEVST 93 (108)
T ss_dssp CCEEEEEEEECC-CCSCCEEEEEE-TTTEEGGG-----GCBTTEEEEEEEETTTTEEEEEEEECSCCGGGCEEEEEEEEC
T ss_pred CCEEEEEEECCCccCCCcEEEEcc-CCcccccc-----cCCceEEEeeEEecccccceEEEEEecCCCccCEEEEEEEec
Confidence 46889999988888 9999999 44211100 01123332210 11346899999999999999999977
Q ss_pred C-CCceEeEEEEEE
Q psy16425 75 D-PMKSQVGYLEVV 87 (163)
Q Consensus 75 ~-~~~~~~~~l~v~ 87 (163)
. +.....+.|.|.
T Consensus 94 ~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 94 KDKFDCSNFNLTVH 107 (108)
T ss_dssp SSCEEEEEEEEEEE
T ss_pred CCCceEEEEEEEEe
Confidence 6 444555566653
No 296
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.15 E-value=7.4e-11 Score=69.31 Aligned_cols=60 Identities=18% Similarity=0.313 Sum_probs=44.4
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD 75 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 75 (163)
..+.|.|...+.|.+.|.|++ ++..+.. .... .. .+...|.|.+++.+|+|.|+|.+.|.
T Consensus 27 ~~v~l~C~~~g~p~p~v~W~~-~g~~~~~--------~~~~-~~---~~~~~L~i~~v~~~D~G~Y~C~a~N~ 86 (99)
T 2yr3_A 27 QDFVLQCSVRGTPVPRITWLL-NGQPIQY--------ARST-CE---AGVAELHIQDALPEDHGTYTCLAENA 86 (99)
T ss_dssp CCEEEECEEEEESCCCCEEEE-SSSBCSS--------CCCE-EE---TTEEEEEECSCCTTCCBCEEEEEECS
T ss_pred CeEEEEEEEeeeCCCeEEEEE-CCEECcc--------cceE-ee---CCeEEEEECCCChhhCEEEEEEEEEC
Confidence 467889999999999999999 5544421 1111 11 12348999999999999999999776
No 297
>3rgv_A YAE62 TCR A chain; TCR, MHC, MHC class I, immune system; 2.90A {Mus musculus} PDB: 3c60_A
Probab=99.14 E-value=1.9e-10 Score=76.27 Aligned_cols=132 Identities=16% Similarity=0.161 Sum_probs=78.6
Q ss_pred ceeEEEeeeeccCCCEEEEEEcC-Cce---EEe-eeeeEEecCCeEEEEeC-CCceEEEEEcccCCCCCeEEEEEEEeC-
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVD-TQT---ILT-IQTHVITKNHRIGVTHS-ETKAWYLHIREVRESDRGWYMCQVNTD- 75 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~-~~~---~~~-~~~~~~~~~~r~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~~~~~- 75 (163)
..+.|.|.........+.||+.. +.. +.. .........+|+....+ ....++|.|.+++++|+|.|.|.+...
T Consensus 16 ~svtL~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~l~~~DsG~Y~Ca~~~~~ 95 (200)
T 3rgv_A 16 DFLFINCTYSTTGYPTLFWYVQYSGEGPQLLLQVTTANNKGSSRGFEATYDKGTTSFHLQKTSVQEIDSAVYYCAANSGT 95 (200)
T ss_dssp CCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSTTCEEEETTEEEECBTTTTBCCEEESSCCSTTCEEEEEEEESSS
T ss_pred CCEEEEEEecCCCCcEEEEEEeCCCCCcEEEEEecCCCCcccCCceEEEECCCCCEEEEEEcCCcCccCCCEEEEeccCc
Confidence 46788888776556789999863 211 111 11111123467777643 346789999999999999999998532
Q ss_pred -CCceEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccC-CCCeEEEEECCeEEEecC
Q psy16425 76 -PMKSQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGS-PKPNITWRREGGELIAQG 136 (163)
Q Consensus 76 -~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p~v~W~~~~~~~~~~~ 136 (163)
........|.|...... ..|. ..........+.|.|.+.+. |...+.|.++|..+....
T Consensus 96 ~~~fG~GT~L~V~~~~~~-~~P~-V~~~~~~~~~~tl~Cl~~gf~P~i~v~~~~~g~~~~~~~ 156 (200)
T 3rgv_A 96 YQRFGTGTKLQVVPNIQN-PDPA-VYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDK 156 (200)
T ss_dssp CCCCCCCEEEEEECCCSS-CCCE-EEEEEESSSSSCEEEEEESCCTTCCCCCCSSTTCEECCC
T ss_pred ccccCcCEEEEEeCCCCC-CCCe-EEEccCCCCCceEEEEcccccCCeEeEeccCCcEEeecc
Confidence 12223346666543110 0010 00111122347899999874 544699999998775543
No 298
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.14 E-value=7.6e-11 Score=82.59 Aligned_cols=131 Identities=15% Similarity=0.079 Sum_probs=41.7
Q ss_pred eeEEEeeeeccCCC---EEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCC---
Q psy16425 4 RMLIEIGEMLMAES---TVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPM--- 77 (163)
Q Consensus 4 ~~~~~~~~~~~~~~---~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~--- 77 (163)
.+.|.|...+..+. .|.||| ++..+.... ... ......|.+......|.+.|+|++.+...
T Consensus 103 ~~~LtC~v~g~~P~~~l~itW~k-g~~~l~~~~---~~~---------~~~~~~l~~~~~~~D~g~~~~C~A~~~l~~~g 169 (291)
T 1mq8_A 103 NLTLRCQVEGGAPRANLTVVLLR-GEKELKREP---AVG---------EPAEVTTTVLVRRDHHGANFSCRTELDLRPQG 169 (291)
T ss_dssp CCEEEEEECCCBSTTTEEEEEES-SSSEEEEEE---CCB---------TTEEEEEECCCSSSCSSCEEEEEEEEECGGGT
T ss_pred CEEEEEEecCccCCCCcEEEEEE-CCEEeeccc---CCC---------CCceEEEEeeeeeccCCceEEEEEEecCCccC
Confidence 56677776554443 699999 555553221 000 11233677777777777799999976411
Q ss_pred ------ceEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCC---eEEEEECCeEEEecCCceEEeceEEEE
Q psy16425 78 ------KSQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKP---NITWRREGGELIAQGNGQEDFPFFKRT 148 (163)
Q Consensus 78 ------~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p---~v~W~~~~~~~~~~~~~~~~~~~l~i~ 148 (163)
.+....|.|+++|........ ...+.+|+.+.|.|.+.|+|++ .+.|.++|+.+.... ..++..++++
T Consensus 170 ~~l~~~~s~~~~L~V~~~P~~~~~~~~-p~~l~eG~~v~l~C~~~g~~P~~~~~v~w~~~g~~l~~~~--~~~g~~~~~~ 246 (291)
T 1mq8_A 170 LELFENTSAPYQLQTFVLPATPPQLVS-PRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTV--TYGNDSFSAK 246 (291)
T ss_dssp SCEEEECCCCEECBC-----------------------------------------------------------------
T ss_pred CccccccccceEEEEEecCCCCceecC-CcCccCCCeEEEEEEcCCCCCCcccEEEEEECCEecCcee--eecCCeEEEE
Confidence 234457888887643221111 2257899999999999997554 599999998875432 2234444444
Q ss_pred cc
Q psy16425 149 KK 150 (163)
Q Consensus 149 ~v 150 (163)
..
T Consensus 247 ~~ 248 (291)
T 1mq8_A 247 AS 248 (291)
T ss_dssp --
T ss_pred Ee
Confidence 33
No 299
>2bnu_A TCR alpha chain, T-cell receptor alpha chain C region; superagonist peptide T-cell vaccines, transmembrane, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2bnq_D 2bnr_D 2f54_D 2pyf_A* 2pye_D* 2f53_D 2p5e_D* 2p5w_D* 3mv7_D 3mv8_D 3mv9_D 3utt_D 2cdg_A
Probab=99.14 E-value=6.1e-10 Score=74.07 Aligned_cols=117 Identities=16% Similarity=0.189 Sum_probs=72.2
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCC-ce---E-EeeeeeEEecCCeEEEEeC-CCceEEEEEcccCCCCCeEEEEEEEeCC
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDT-QT---I-LTIQTHVITKNHRIGVTHS-ETKAWYLHIREVRESDRGWYMCQVNTDP 76 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~-~~---~-~~~~~~~~~~~~r~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~~~~~~ 76 (163)
.++.|.|...+.....|.||+... .. + +..........+|+.+..+ ..++++|.|.+++.+|+|.|.|.+.+..
T Consensus 16 ~~v~L~C~~s~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~Dsg~Y~C~~~~~~ 95 (203)
T 2bnu_A 16 ENLVLNCSFTDSAIYNLQWFRQDPGKGLTSLLLIQSSQREQTSGRLNASLDKSSGRSTLYIAASQPGDSATYLCAVRPTS 95 (203)
T ss_dssp CCEEEEEEESCCCEEEEEEEEECTTSCEEEEEEEETTCSEEEETTEEEEEETTTTEEEEEESSCCGGGCEEEEEEEEECS
T ss_pred CCEEEEEEECCCCcceEEEEEeCCCCCcEEEEEECCCCccccCCCeEEEEcCCCCEEEEEEeeCCcccCeEEEEEEEcCc
Confidence 468888887666556899998642 21 1 1111111123577877643 3467899999999999999999996531
Q ss_pred ------CceEeEEEEEEcCCcccccCCCCcEEE--eCCCcEEEEeEecc-CCCCeE
Q psy16425 77 ------MKSQVGYLEVVVPPDILDYPTSTDMVI--REGSNVTLKCAASG-SPKPNI 123 (163)
Q Consensus 77 ------~~~~~~~l~v~~~p~~~~~~~~~~~~~--~~g~~~~l~C~~~~-~p~p~v 123 (163)
.......|.|...+... .| ...+ .....+.|.|.+.| +|.|.+
T Consensus 96 ~~~~~~~~g~gt~L~V~~~~~~~-~P---~V~~~~~~~~~~~L~C~~~g~~P~p~v 147 (203)
T 2bnu_A 96 GGSYIPTFGRGTSLIVHPYIQNP-DP---AVYQLRRSKSSDKSVCLFTDFDSQTNV 147 (203)
T ss_dssp SSTTCCEECCCEEEEEECCCSSC-CC---EEEEECCSSSSSCEEEEEESCCTTCCC
T ss_pred CcceeeeeCCCEEEEEeCCCCCC-CC---eEEecCCCCCCcEEEEEccccccCccc
Confidence 11133567776532100 00 1111 12347899999998 798877
No 300
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.13 E-value=7.7e-10 Score=73.27 Aligned_cols=77 Identities=14% Similarity=0.245 Sum_probs=56.8
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.|.|...+.|.+.+.|++ ++..+ ....++...........|.|.+++.+|+|.|+|.+.|. +.....
T Consensus 133 ~~~~l~C~~~g~p~p~v~W~~-~~~~~--------~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~ 203 (212)
T 2r15_A 133 KALNLTCNVWGDPPPEVSWLK-NEKAL--------AQTDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSD 203 (212)
T ss_dssp CCEEEEEEEECSSCCEEEEEE-TTEEE--------CCCSSEEEEEETTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEcCCCCceEEEEE-CCeEC--------ccCCCEEEEEcCCCEEEEEEcCcchHHCeEEEEEEEcCCCcEEEE
Confidence 357888999999999999999 55554 23345555544344568999999999999999999776 444455
Q ss_pred EEEEEEc
Q psy16425 82 GYLEVVV 88 (163)
Q Consensus 82 ~~l~v~~ 88 (163)
+.|.|.+
T Consensus 204 ~~l~V~~ 210 (212)
T 2r15_A 204 FTVSVFI 210 (212)
T ss_dssp EEEEEEC
T ss_pred EEEEEEc
Confidence 5666654
No 301
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.12 E-value=1.6e-10 Score=68.74 Aligned_cols=76 Identities=18% Similarity=0.153 Sum_probs=54.2
Q ss_pred ceeEEEeeeeccCC-CEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCceEe
Q psy16425 3 ARMLIEIGEMLMAE-STVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~-~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~ 81 (163)
.++.|.|...+.|. +.+.||| ++..+. ...|+.+...+ ...+|.|.+++.+|+|.|+|.+. .....
T Consensus 24 ~~v~l~C~v~~~~~~~~v~W~k-~g~~i~--------~~~r~~~~~~~-~~~~L~I~~v~~~D~G~Y~C~a~---~~~~~ 90 (104)
T 2eny_A 24 ESCSFECVLSHESASDPAMWTV-GGKTVG--------SSSRFQATRQG-RKYILVVREAAPSDAGEVVFSVR---GLTSK 90 (104)
T ss_dssp CCEEEEEECSSCCCSSCBCCBS-SSSBCS--------BCSSCEEEEET-TEEEEEECSCCTTTCSCEEEEET---TEEEE
T ss_pred CcEEEEEEEcCCCCCceeEEEE-CCEECC--------CCCCEEEEEcC-CEEEEEECCCCHHHCEEEEEEEC---CeeEE
Confidence 35788888877664 4799999 565542 23455544433 34589999999999999999883 34566
Q ss_pred EEEEEEcCCc
Q psy16425 82 GYLEVVVPPD 91 (163)
Q Consensus 82 ~~l~v~~~p~ 91 (163)
+.|.|..+|.
T Consensus 91 a~L~V~~~p~ 100 (104)
T 2eny_A 91 ASLIVRERSG 100 (104)
T ss_dssp ECEEEECCCS
T ss_pred EEEEEeCCCc
Confidence 7888887764
No 302
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.12 E-value=4.1e-10 Score=68.63 Aligned_cols=90 Identities=16% Similarity=0.177 Sum_probs=53.9
Q ss_pred ceeEEEeeeec--cCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCC--CceEEEEEcccCCCCCeEEEEEEEeC-CC
Q psy16425 3 ARMLIEIGEML--MAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSE--TKAWYLHIREVRESDRGWYMCQVNTD-PM 77 (163)
Q Consensus 3 ~~~~~~~~~~~--~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~ 77 (163)
..+.|.|...+ .|.+.|.|++.+. .+.... .....+....... ....+|.|.+++.+|+|.|+|.+.|. +.
T Consensus 24 ~~v~L~C~~~g~p~~~~~i~W~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~ 99 (122)
T 3s35_X 24 EKLVLNCTARTELNVGIDFNWEYPSS-KHQHKK---LVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMT 99 (122)
T ss_dssp CCEEEEEEEEECTTCCCEEEEECSCT-TCCHHH---HBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEEEEECSSCE
T ss_pred CeEEEEEEEEcCCCCcEEEEEECCCc-ccCCce---eeeeccccccCCceeeEEEEEEECCCCcccCEEEEEEEccCCCc
Confidence 36788888877 5567899999543 211000 0001111111110 12347999999999999999999776 44
Q ss_pred ceEeEEEEEEcCCcccccC
Q psy16425 78 KSQVGYLEVVVPPDILDYP 96 (163)
Q Consensus 78 ~~~~~~l~v~~~p~~~~~~ 96 (163)
....+.|.|..+|.+...+
T Consensus 100 ~~~~~~l~V~~~p~i~~~p 118 (122)
T 3s35_X 100 KKNSTFVRVHEKPFVAFGS 118 (122)
T ss_dssp EEEEEEEEEEEEECC----
T ss_pred eEEEEEEEEeccCeEEeec
Confidence 5566778888777766543
No 303
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.12 E-value=7.5e-10 Score=64.55 Aligned_cols=71 Identities=23% Similarity=0.287 Sum_probs=49.5
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCceEeE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKSQVG 82 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~ 82 (163)
..+.|.|.. +.|.+.|.|++ ++..+. ...++.+...+ ...+|.|.+++.+|+|.|+|.+ +.....+
T Consensus 24 ~~v~l~C~~-~~p~~~v~W~k-~~~~l~--------~~~~~~~~~~~-~~~~L~I~~v~~~D~G~Y~C~a---g~~~~~~ 89 (95)
T 2k1m_A 24 SPAVFEAET-ERAGVKVRWQR-GGSDIS--------ASNKYGLATEG-TRHTLTVREVGPADQGSYAVIA---GSSKVKF 89 (95)
T ss_dssp SCEEEEEEC-SSSSCCCEEEC-SSSEEC--------SSTTCEEEEET-TEEEEEESSCCTTCCSEEEEEE---TTEEEEE
T ss_pred CcEEEEEEe-CCCCCeEEEEE-CCEECC--------CCCcEEEEEcC-CEEEEEEcCCCcccCEEEEEEE---CCceEEE
Confidence 357788877 78889999999 555542 23344444333 2458999999999999999999 3344445
Q ss_pred EEEEE
Q psy16425 83 YLEVV 87 (163)
Q Consensus 83 ~l~v~ 87 (163)
.|.|.
T Consensus 90 ~l~V~ 94 (95)
T 2k1m_A 90 DLKVI 94 (95)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 56553
No 304
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=99.12 E-value=3.5e-10 Score=68.73 Aligned_cols=86 Identities=17% Similarity=0.216 Sum_probs=55.0
Q ss_pred ceeEEEeeeec--cCCCEEEEEEcCCceEEeee---eeEE--ecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC
Q psy16425 3 ARMLIEIGEML--MAESTVAWLRVDTQTILTIQ---THVI--TKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD 75 (163)
Q Consensus 3 ~~~~~~~~~~~--~~~~~i~W~k~~~~~~~~~~---~~~~--~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 75 (163)
.++.|.|...+ .+...|.|++.+ ..+.... +... ...+|+.+.. +++|.|.+++.+|+|.|+|.+.+.
T Consensus 19 ~~v~L~C~~~~~~~~~~~v~W~k~~-~~i~~~~~~~~~~~~~~~~~R~~~~~----~~sL~I~~v~~~D~G~Y~C~v~~~ 93 (117)
T 3q0h_A 19 GSIILQCHLSSTTAQVTQVNWEQQD-QLLAICNADLGWHISPSFKDRVAPGP----GLGLTLQSLTVNDTGEYFCIYHTY 93 (117)
T ss_dssp CCEEECEEEESCCCEEEEEEEEETT-EEEEEEETTTEEECCGGGTTTEEECS----TTCEEECSCCGGGCEEEEEEEEEE
T ss_pred CCEEEEEEecCCCCCEEEEEEEeCC-EEEEEEECCCCceeCccccCcEEeCC----ceEEEEeeCChhhCEEEEEEEEEC
Confidence 46888888765 445679999953 3332211 1111 2246776533 348999999999999999998543
Q ss_pred --CCceEeEEEEEEcCCccc
Q psy16425 76 --PMKSQVGYLEVVVPPDIL 93 (163)
Q Consensus 76 --~~~~~~~~l~v~~~p~~~ 93 (163)
+.....+.|.|.++|...
T Consensus 94 ~~g~~~~~~~L~V~~pp~~~ 113 (117)
T 3q0h_A 94 PDGTYTGRIFLEVLESSVAE 113 (117)
T ss_dssp TTCCEEEEEEEEEECC----
T ss_pred CCCCeEEEEEEEEEccCccc
Confidence 455667788998887553
No 305
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.12 E-value=1.9e-10 Score=69.82 Aligned_cols=81 Identities=21% Similarity=0.253 Sum_probs=51.4
Q ss_pred ceeEEEeeeecc---CCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeC--C---CceEEEEEcccCCCCCeEEEEEEEe
Q psy16425 3 ARMLIEIGEMLM---AESTVAWLRVDTQTILTIQTHVITKNHRIGVTHS--E---TKAWYLHIREVRESDRGWYMCQVNT 74 (163)
Q Consensus 3 ~~~~~~~~~~~~---~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~--~---~~~~~L~i~~v~~~d~G~Y~C~~~~ 74 (163)
.++.|.|...+. |.|.|.||| ++...... ....++.+... . ..+++|.|.+++..|+|.|+|++.+
T Consensus 28 ~~v~L~C~v~g~~~~p~P~V~W~K-gk~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~Cevsn 101 (118)
T 2edn_A 28 KDAVVVAKVNGKELPDKPTIKWFK-GKWLELGS-----KSGARFSFKESHNSASNVYTVELHIGKVVLGDRGYYRLEVKA 101 (118)
T ss_dssp SCEECCEEEETTTSSSCCCCEEEE-TTTCCCCC-----STTSSCEEEEEECSSSCEEEEEEEESSCCTTTCSCEEEEEEC
T ss_pred CCEEEEEEEeccCCCCCCcEEEee-CCEeccCC-----CCccEEEeccccccccccceEEEEEeeCChhhCEEEEEEEEE
Confidence 357777876653 789999999 43211100 00122222211 0 1246899999999999999999977
Q ss_pred C-CCceEeEEEEEEcC
Q psy16425 75 D-PMKSQVGYLEVVVP 89 (163)
Q Consensus 75 ~-~~~~~~~~l~v~~~ 89 (163)
. +..+..+.|.|..+
T Consensus 102 ~~g~~s~~~~L~V~~~ 117 (118)
T 2edn_A 102 KDTCDSCGFNIDVEAP 117 (118)
T ss_dssp SSCEEEEEECCEEECC
T ss_pred cCCcEEEEEEEEEEcC
Confidence 6 55566777777653
No 306
>3tjh_C 42F3 alpha; IG MHC, antigen recognition, TCR-PMHC, membrane receptor, IM system; 2.12A {Mus musculus} PDB: 3tpu_A 3tfk_C 1j8h_D* 1fyt_D* 4gkz_A* 3rev_A 1mwa_A* 1g6r_A* 1tcr_A* 2ckb_A 1zgl_M 3c5z_A 1i9e_A* 2oi9_B 2e7l_A 2icw_I 3e2h_B 3e3q_D 4h1l_G
Probab=99.11 E-value=9.9e-10 Score=74.05 Aligned_cols=133 Identities=15% Similarity=0.174 Sum_probs=77.2
Q ss_pred ceeEEEeeeeccCCCEEEEEEcC-Cce---EEe-eeeeEEecC-CeEEEEeC-CCceEEEEEcccCCCCCeEEEEEEEeC
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVD-TQT---ILT-IQTHVITKN-HRIGVTHS-ETKAWYLHIREVRESDRGWYMCQVNTD 75 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~-~~~---~~~-~~~~~~~~~-~r~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 75 (163)
..+.|.|.........+.||+.. +.. +.. ......... +|+....+ ....++|+|.+++++|+|.|.|.+...
T Consensus 25 ~sVtL~C~~s~~~~~~v~WyrQ~pg~~~~~Li~~~~~~~~~~~~~Rfs~s~~~~~~~~sLtI~~lq~~DSG~YyCa~~~~ 104 (226)
T 3tjh_C 25 ASLQLRCKYSYSATPYLFWYVQYPRQGLQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVHWSDSAVYFCAVSAK 104 (226)
T ss_dssp SCEEECCEEEESSCEEEEEEEECTTSCCEEEEEECSSSSEEECGGGEEEEEETTTTEEEEEESSCCGGGCEEEEEEEEES
T ss_pred CCEEEEEEEecCCCCeEEEEEECCCCCcEEEEEecCCCccccccCcEEEEEcCCCCEEEEEEecCCcccCCCEEEEEEec
Confidence 45788888766556689999963 221 111 111111223 78877643 356889999999999999999998532
Q ss_pred ---CC--ceEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEecc-CCCCeEEEEECCeEEEecCC
Q psy16425 76 ---PM--KSQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASG-SPKPNITWRREGGELIAQGN 137 (163)
Q Consensus 76 ---~~--~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p~v~W~~~~~~~~~~~~ 137 (163)
.. ......|.|... +....+...........+.|.|.+.+ +|...+.|.+++..+.....
T Consensus 105 ~~~~~~~fG~GT~LtV~~~--~~~~~P~V~~~~~~~~~~tl~Cl~~~f~P~i~v~~~~~~~~~~~~~t 170 (226)
T 3tjh_C 105 GTGSKLSFGKGAKLTVSPN--IQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKC 170 (226)
T ss_dssp SCSSSEEECCCEEEEEECC--CSSCCCEEEEEEECC---CEEEEEESCCTTCCCCCCSCTTEEECCCE
T ss_pred CCccccccCCCeEEEEeCC--CCCCCCEEEEcccCCCCeEEEEEcccccCCcEEEeeccCceeecCce
Confidence 11 112245666532 10000000001111234789999987 56457999999988765543
No 307
>3mbe_C I-AG7; T cell receptor, histocompatability antigen, MHC class II, I immune system; HET: NAG; 2.89A {Mus musculus}
Probab=99.11 E-value=1.6e-09 Score=73.26 Aligned_cols=131 Identities=18% Similarity=0.219 Sum_probs=78.9
Q ss_pred ceeEEEeeeeccCCCEEEEEEcC-Cce---EEeeeeeEEecCCeEEEEe-CCCceEEEEEcccCCCCCeEEEEEEEeCC-
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVD-TQT---ILTIQTHVITKNHRIGVTH-SETKAWYLHIREVRESDRGWYMCQVNTDP- 76 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~-~~~---~~~~~~~~~~~~~r~~~~~-~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~- 76 (163)
..+.|.|..... ...+.||+.. +.. +....... ...+|+.... .....++|+|.+++++|+|.|.|.+....
T Consensus 17 ~sVtL~C~~s~~-~~~v~Wyrq~pg~~~~~l~~~~~~~-~~~~Rfs~~~~~~~~~~sLtI~~lq~~DSG~Y~Ca~~~~~~ 94 (229)
T 3mbe_C 17 ADSGLRCNFSTT-MKSVQWFQQNHRGRLITLFYLAQGT-KENGRLKSTFNSKERYSTLHIKDAQLEDSGTYFCAAEDGGS 94 (229)
T ss_dssp CCEEEEEEESSC-CSCEEEEEECSSSCBCCCEEESSEE-EEETTEEEEEETTTTEEEEEECSCCSTTCBEEEEEEECSSS
T ss_pred CCEEEEEEEeCC-CcEEEEEEECCCCCcEEEEEeCCCC-ccCCCEEEEECCCCCEEEEEEECCcccCCCCEEEEEEeCCC
Confidence 467888887666 6689999863 111 11111111 3357777764 33567899999999999999999996421
Q ss_pred ----CceEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccC-CCCeEEEEECCeEEEecCC
Q psy16425 77 ----MKSQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGS-PKPNITWRREGGELIAQGN 137 (163)
Q Consensus 77 ----~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p~v~W~~~~~~~~~~~~ 137 (163)
.......|.|...... ..|. ..........+.|.|.+.+. |...+.|.+++..+.....
T Consensus 95 ~~~~~fG~GT~L~V~~~~~~-p~P~-Vf~~~~~~~~vtl~Cl~~gf~P~i~v~~~~~~~~~~~~~t 158 (229)
T 3mbe_C 95 GNKLIFGTGTLLSVKPNIQN-PEPA-VYQLKDPRSQDSTLCLFTDFDSQINVPKTMESGTFITDKC 158 (229)
T ss_dssp TTCEEECCCCEEEEECCCSS-CCCE-EEEEECTTCTTCEEEEEESCCSSSCCCCCCSSSEEECCCC
T ss_pred cccceeCCCEEEEEecccCC-CCCE-EEEccCCCCCEEEEEEccccCCceEeEeeccCceEecCce
Confidence 1122235666542100 0000 00111122358899999874 5457999999988755443
No 308
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.10 E-value=1.3e-09 Score=65.57 Aligned_cols=75 Identities=21% Similarity=0.341 Sum_probs=53.7
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCceEeE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKSQVG 82 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~ 82 (163)
.++.|.|...+. +.|.||+ ++..+ ....++.+...+ ....|.|.+++.+|+|.|+|.+ +.....+
T Consensus 35 ~~v~l~C~~~~~--p~v~W~k-~~~~l--------~~~~~~~~~~~~-~~~~L~I~~v~~~D~G~Y~C~a---~~~~~~~ 99 (113)
T 2edh_A 35 ATAVLRCELSKM--APVEWWK-GHETL--------RDGDRHSLRQDG-ARCELQIRGLVAEDAGEYLCMC---GKERTSA 99 (113)
T ss_dssp SCEEEEEEESSC--CCCEEEE-SSSBC--------CCSSSEEEEEET-TEEEEEECSCCSTTCEEEEEEE---TTEEEEE
T ss_pred CeEEEEEEECCC--CcEEEEE-CCEEC--------CCCCcEEEEECC-CEEEEEECCCChhhCEEEEEEe---CCCCEEE
Confidence 367788887654 6799999 55544 223555555443 3458999999999999999999 4556667
Q ss_pred EEEEEcCCcc
Q psy16425 83 YLEVVVPPDI 92 (163)
Q Consensus 83 ~l~v~~~p~~ 92 (163)
.|.|..+|..
T Consensus 100 ~l~V~~~p~~ 109 (113)
T 2edh_A 100 MLTVRAMPSG 109 (113)
T ss_dssp EEEECCCCCS
T ss_pred EEEEeCCCCC
Confidence 7888776643
No 309
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.09 E-value=6.4e-10 Score=65.76 Aligned_cols=75 Identities=17% Similarity=0.298 Sum_probs=54.6
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCceEeE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKSQVG 82 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~ 82 (163)
.++.|.|...+.|.+ |.|++ ++..+ ....++.+...+ ...+|.|.+++.+|+|.|+|.+ +.....+
T Consensus 24 ~~v~l~C~~~~~p~~-v~W~k-~~~~l--------~~~~~~~~~~~~-~~~~L~I~~v~~~D~G~Y~C~~---g~~~~~~ 89 (103)
T 2e7b_A 24 GAATLRCVLSSVAAP-VKWCY-GNNVL--------RPGDKYSLRQEG-AMLELVVRNLRPQDSGRYSCSF---GDQTTSA 89 (103)
T ss_dssp SCEEEEEECSSCCCS-CEEEE-SSSBC--------CCSSSEEEEECS-SEEEEEECSCCTTTCCCEEEEC---SSCBCCB
T ss_pred CcEEEEEEEeCCCCC-eEEEE-CCEEC--------CCCCcEEEEEcC-CEEEEEEccCCcccCEEEEEEE---CCcEEEE
Confidence 468889998888888 99999 55544 223455555443 3457999999999999999983 3445556
Q ss_pred EEEEEcCCc
Q psy16425 83 YLEVVVPPD 91 (163)
Q Consensus 83 ~l~v~~~p~ 91 (163)
.|.|..+|.
T Consensus 90 ~l~V~~~p~ 98 (103)
T 2e7b_A 90 TLTVTALPS 98 (103)
T ss_dssp CEEEECCCC
T ss_pred EEEEEeccc
Confidence 778877664
No 310
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.08 E-value=3.4e-10 Score=67.36 Aligned_cols=73 Identities=18% Similarity=0.218 Sum_probs=50.9
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCceEeE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKSQVG 82 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~ 82 (163)
..+.|.|...+.|.+ |.||+ ++..+. ...++.+...+ ....|.|.+++.+|+|.|+|.+.|. .....+
T Consensus 24 ~~v~l~C~~~~~~~~-v~W~k-~g~~~~--------~~~~~~~~~~~-~~~~L~I~~v~~~D~G~Y~C~a~n~-~~~~~~ 91 (106)
T 2dlt_A 24 EQAVFKCEVSDEKVT-GKWYK-NGVEVR--------PSKRITISHVG-RFHKLVIDDVRPEDEGDYTFVPDGY-ALSLSA 91 (106)
T ss_dssp CCEECCCEESCSSCE-EEEEE-SSCBCC--------CCSSCEEEEET-TEEEEEESSCCTTTCSCEEEEEETS-CCCCCB
T ss_pred CeEEEEEEEcCCCcc-eEEEc-CCEECc--------CCCCEEEEEeC-CEEEEEECCCCcCCCEEEEEEEccC-CceEEE
Confidence 357788888887777 99999 555442 23444444332 3458999999999999999999776 444445
Q ss_pred EEEEE
Q psy16425 83 YLEVV 87 (163)
Q Consensus 83 ~l~v~ 87 (163)
.|.|.
T Consensus 92 ~l~V~ 96 (106)
T 2dlt_A 92 KLNFL 96 (106)
T ss_dssp CEEEE
T ss_pred EEEEE
Confidence 55555
No 311
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.08 E-value=1.1e-10 Score=68.94 Aligned_cols=77 Identities=18% Similarity=0.215 Sum_probs=50.7
Q ss_pred eeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCceEeEE
Q psy16425 4 RMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKSQVGY 83 (163)
Q Consensus 4 ~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~ 83 (163)
.+.|.|...+.| +.|.|++ ++..+..... ...++.+...+ ....|.|.+++.+|+|.|+|.+.+ ....+.
T Consensus 25 ~v~l~C~~~~~~-~~v~W~k-~g~~i~~~~~----~~~~~~~~~~~-~~~~L~I~~~~~~D~G~Y~C~a~n---~~~~~~ 94 (101)
T 2edk_A 25 RVEMAVEVSEEG-AQVMWMK-NGVELTREDS----FKARYRFKKDG-KRHILIFSDVVQEDRGRYQVITNG---GQCEAE 94 (101)
T ss_dssp CCBCCEEESCSS-CCCEEEE-SSCBCCCSCC----SSCCCEEEECS-SEEEEECSSCCGGGCSBEEEECSS---CEECCB
T ss_pred CEEEEEEEeCCC-CEEEEEE-CCEECCCCCC----cceeEEEEECC-CEEEEEECCCChhhCEEEEEEEcC---CcEEEE
Confidence 567788888777 8999999 5554421110 00044444332 345799999999999999999854 344456
Q ss_pred EEEEcCC
Q psy16425 84 LEVVVPP 90 (163)
Q Consensus 84 l~v~~~p 90 (163)
|.|..+|
T Consensus 95 l~V~~~P 101 (101)
T 2edk_A 95 LIVEEKQ 101 (101)
T ss_dssp EEEECCC
T ss_pred EEEeCCC
Confidence 6666543
No 312
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.08 E-value=9.2e-10 Score=64.45 Aligned_cols=69 Identities=25% Similarity=0.369 Sum_probs=47.3
Q ss_pred ceeEEEeeee-ccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceE
Q psy16425 3 ARMLIEIGEM-LMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQ 80 (163)
Q Consensus 3 ~~~~~~~~~~-~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~ 80 (163)
.++.|.|... +.|.+.|.|++.+.... ..+. ....+ +|.|.+++.+|+|.|+|.+.|. +....
T Consensus 26 ~~v~l~C~~~~~~p~~~v~W~k~~~~~~----------~~~~-~~~~~----~L~i~~v~~~D~G~Y~C~a~n~~g~~~~ 90 (98)
T 1gl4_B 26 ADVTFICTAKSKSPAYTLVWTRLHNGKL----------PSRA-MDFNG----ILTIRNVQPSDAGTYVCTGSNMFAMDQG 90 (98)
T ss_dssp CCEEEEEEEEESSSCCEEEEEEGGGBCC----------CTTE-EEETT----EEEECSCCGGGCEEEEEEEECSSCEEEE
T ss_pred CCEEEEEeCCCCCCCcEEEEEeCCCCCC----------Ccee-ecCCC----EEEEeCCChhhCEEEEEEecCCCCcccc
Confidence 4678889887 68999999999533221 0111 12222 8999999999999999999776 33344
Q ss_pred eEEEEE
Q psy16425 81 VGYLEV 86 (163)
Q Consensus 81 ~~~l~v 86 (163)
.+.|.|
T Consensus 91 ~~~l~V 96 (98)
T 1gl4_B 91 TATLHV 96 (98)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 445554
No 313
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.08 E-value=1.7e-09 Score=63.90 Aligned_cols=75 Identities=13% Similarity=0.154 Sum_probs=53.2
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCceEeE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKSQVG 82 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~ 82 (163)
.++.|.|. .+.|.+.|.|++ ++..+ ....++.+...+ ....|.|.+++.+|+|.|+|. .+.....+
T Consensus 24 ~~v~l~C~-~~~p~~~v~W~k-~~~~l--------~~~~~~~~~~~~-~~~~L~I~~v~~~D~G~Y~C~---~g~~~~~~ 89 (103)
T 2dku_A 24 GTAVFTCK-TEHPAATVTWRK-GLLEL--------RASGKHQPSQEG-LTLRLTISALEKADSDTYTCD---IGQAQSRA 89 (103)
T ss_dssp SEEEEEEE-CSSCCSCCEEEE-SSCBC--------CSSSSEEEEEET-TEEEEEEESCCTTTCSEEEEE---CSSCBCCE
T ss_pred CcEEEEEE-eCCCCCeEEEEe-CCEEC--------CCCCeEEEEeCC-CEEEEEECCCCcccCEEEEEE---eCCceEEE
Confidence 36778888 578889999999 55544 223455544322 345899999999999999998 34445567
Q ss_pred EEEEEcCCc
Q psy16425 83 YLEVVVPPD 91 (163)
Q Consensus 83 ~l~v~~~p~ 91 (163)
.|.|...|.
T Consensus 90 ~l~V~~~p~ 98 (103)
T 2dku_A 90 QLLVQGRRS 98 (103)
T ss_dssp EEEEECSCC
T ss_pred EEEEeCccC
Confidence 788877654
No 314
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.08 E-value=8.9e-10 Score=65.00 Aligned_cols=73 Identities=15% Similarity=0.266 Sum_probs=51.2
Q ss_pred eeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCceEeEE
Q psy16425 4 RMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKSQVGY 83 (163)
Q Consensus 4 ~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~ 83 (163)
.+.|.|... .|.+.|.|++ ++..+ ....++.+...+ ....|.|.+++.+|+|.|+|.+. .....+.
T Consensus 28 ~v~L~C~~~-~p~~~v~W~k-~g~~~--------~~~~~~~~~~~~-~~~~L~I~~~~~~D~G~Y~C~a~---~~~~~~~ 93 (102)
T 2eo1_A 28 SATLSCEVA-QAQTEVTWYK-DGKKL--------SSSSKVRVEAVG-CTRRLVVQQAGQAEAGEYSCEAG---GQQLSFR 93 (102)
T ss_dssp CEEECCBCS-CSSSCCEEEE-TTEEC--------CCCSSEEEEEET-TEEEEEETTCCTTTCSCEEEEET---TEECCEE
T ss_pred cEEEEEEec-CCCCceEEEE-CCEEC--------CCCCCEEEEEcC-CEEEEEECCCCcccCEEEEEEcC---CCcEEEE
Confidence 577888876 8889999999 55544 223344444332 23489999999999999999983 2344567
Q ss_pred EEEEcCC
Q psy16425 84 LEVVVPP 90 (163)
Q Consensus 84 l~v~~~p 90 (163)
|.|..+|
T Consensus 94 l~V~~p~ 100 (102)
T 2eo1_A 94 LQVAGQC 100 (102)
T ss_dssp EEEESCC
T ss_pred EEEeCCC
Confidence 7777654
No 315
>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}
Probab=99.06 E-value=5.4e-10 Score=68.71 Aligned_cols=86 Identities=15% Similarity=0.135 Sum_probs=54.4
Q ss_pred cceeEEEeeeeccCC---CEEEEEEcCCce-EE-eeeee------EEecCCeEEEEeCC--CceEEEEEcccCCCCCeEE
Q psy16425 2 AARMLIEIGEMLMAE---STVAWLRVDTQT-IL-TIQTH------VITKNHRIGVTHSE--TKAWYLHIREVRESDRGWY 68 (163)
Q Consensus 2 ~~~~~~~~~~~~~~~---~~i~W~k~~~~~-~~-~~~~~------~~~~~~r~~~~~~~--~~~~~L~i~~v~~~d~G~Y 68 (163)
..++.|.|...+.+. ..|.|+|.+... +. ...+. .....+|+.+.... .++++|.|.+++++|+|.|
T Consensus 20 G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~R~~~~~~~~~~g~~sL~I~~v~~~D~G~Y 99 (125)
T 4gos_A 20 GEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNVQLTDAGTY 99 (125)
T ss_dssp TSCEEEEEEECCCSCGGGCEEEEEETTCSSBSEEEETTEECCTTBCGGGTTCEEECTTTGGGTBCCEEESSCCGGGCEEE
T ss_pred CCCEEEEEEEcCCcccCcEEEEEEEeccCceEEEEEeecccccccCccccceEEEecCCccCCeEEEEECCCChHHCEEE
Confidence 457889998654332 479999954322 11 11111 12235677766554 3578999999999999999
Q ss_pred EEEEEeCCCceEeEEEEEEc
Q psy16425 69 MCQVNTDPMKSQVGYLEVVV 88 (163)
Q Consensus 69 ~C~~~~~~~~~~~~~l~v~~ 88 (163)
+|.+.+. .....+.+++.+
T Consensus 100 ~C~v~~~-~g~~~~~v~LkV 118 (125)
T 4gos_A 100 KCYIITS-KGKGNANLEYKT 118 (125)
T ss_dssp EEEEEET-TEEEEEEEEEEE
T ss_pred EEEEEeC-CCeEEEEEEEEE
Confidence 9999664 344445555544
No 316
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.06 E-value=1.9e-09 Score=64.08 Aligned_cols=60 Identities=18% Similarity=0.290 Sum_probs=43.7
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQV 72 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~ 72 (163)
..+.|.|.. +.|.+.|.|++ ++..+.. ...++.+...+ ...+|.|.+++.+|+|.|+|.+
T Consensus 32 ~~v~L~C~~-~~p~~~v~W~k-~g~~l~~-------~~~~~~~~~~~-~~~~L~I~~v~~~D~G~Y~C~a 91 (104)
T 1pd6_A 32 HKIRLTVEL-ADHDAEVKWLK-NGQEIQM-------SGSKYIFESIG-AKRTLTISQCSLADDAAYQCVV 91 (104)
T ss_dssp SCEEEEEEC-SSSSSCCEEEE-SSSEECC-------CSSSSEEEEET-TEEEEEECSCSSSSCEEEEEEE
T ss_pred CCEEEEEEE-cCCCCEEEEEE-CCEECCC-------CCCeEEEEecC-CEEEEEECCCCcccCEEEEEEE
Confidence 357788877 68888999999 5655421 11445544333 2458999999999999999999
No 317
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.05 E-value=1.2e-09 Score=72.85 Aligned_cols=61 Identities=20% Similarity=0.359 Sum_probs=46.1
Q ss_pred ceeEEEeeeecc-CCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC
Q psy16425 3 ARMLIEIGEMLM-AESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD 75 (163)
Q Consensus 3 ~~~~~~~~~~~~-~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 75 (163)
.++.|.|...+. |.|.|.|+| ++..+.. ..++ ....+..+|.|.+++.+|+|.|+|.+.|.
T Consensus 132 ~~v~l~C~v~g~~P~p~i~W~k-~g~~l~~--------~~~~---~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 193 (207)
T 3rbs_A 132 CNVLLKCKVANIKKETHIVWYK-DEREISV--------DEKH---DFKDGICTLLITEFSKKDAGIYEVILKDD 193 (207)
T ss_dssp TEEEEEEEEESCCTTCEEEEEE-TTEEECC--------CCCC---CCSSEEEEEEETTCCGGGCEEEEEEEEET
T ss_pred CcEEEEEEEeCCCCCCEEEEEE-CCEECCC--------CCce---EcCCCEEEEEECCCCcccCEEEEEEEEcC
Confidence 468899999998 999999999 6665522 2222 11123457999999999999999999776
No 318
>2q86_A Valpha14 TCR; INKT cells, TCR, glycolipid recognition, innate immunity, IM system; HET: NAG BMA MAN FUC; 1.85A {Mus musculus} PDB: 3quy_C* 3o9w_C* 3qux_C* 3o8x_C* 3quz_C* 3rtq_C* 3rzc_C* 3ta3_C* 3tvm_C* 3qi9_C* 3ard_C* 3are_C* 3arf_C* 3arg_C* 3he6_C* 3he7_C* 3arb_C* 3scm_C* 3sda_C* 3sdc_C* ...
Probab=99.04 E-value=1.3e-09 Score=73.85 Aligned_cols=122 Identities=17% Similarity=0.211 Sum_probs=73.0
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCC-ce---E-EeeeeeEEecCCeEEEEeC-CCceEEEEEcccCCCCCeEEEEEEEeCC
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDT-QT---I-LTIQTHVITKNHRIGVTHS-ETKAWYLHIREVRESDRGWYMCQVNTDP 76 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~-~~---~-~~~~~~~~~~~~r~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~~~~~~ 76 (163)
..+.|.|.........+.||+... .. + +..........+|+.+..+ ..++++|.|.+++.+|+|.|.|.+.+..
T Consensus 17 ~svtL~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~~~ 96 (229)
T 2q86_A 17 ENCVLQCNYSVTPDNHLRWYKQDTGKGLVLLTVLVDQKDKTSNGRYSATLDKDAKHSTLHITATLLDDTATYFCVVGDRG 96 (229)
T ss_dssp CCEEEEEEECCSCCSCEEEEEECTTCCEEEEEEECSSEEEEEETTEEEEEETTTTEEEEEECSCCGGGCEEEEEEESCGG
T ss_pred CCEEEEEEECCCCCcEEEEEEECCCCCcEEEEEEcCCCCcccCCCEEEEEcCCCCEEEEEEcccCcccCccEEEEEEecC
Confidence 468888887666667899998642 21 1 1111111233577877653 3467899999999999999999985421
Q ss_pred --CceEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEecc-CCCCeEEEE
Q psy16425 77 --MKSQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASG-SPKPNITWR 126 (163)
Q Consensus 77 --~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p~v~W~ 126 (163)
.......|.|...+... .|. ..........+.|.|.+.+ +|.|.+.+.
T Consensus 97 ~~~~g~gt~L~V~~~~~~~-~P~-V~~~~~~~~~~tL~Cl~~gf~P~p~V~~~ 147 (229)
T 2q86_A 97 SALFGSGTQLIVIPYIQNP-EPA-VYQLKDPRSQDSTLCLFTDFDSQINVPKT 147 (229)
T ss_dssp GCEECCCEEEEEECCCSSC-CCE-EEEEECTTSTTCEEEEEEEECTTCCCCCC
T ss_pred cccccCCEEEEEECcCCCC-CCE-EEEccCCCCCeEEEEEECCcCcCCccccc
Confidence 11223466666422100 010 0111112337899999987 688877553
No 319
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=99.04 E-value=5.9e-09 Score=64.95 Aligned_cols=86 Identities=17% Similarity=0.129 Sum_probs=55.1
Q ss_pred ceeEEEeeeeccC---CCEEEEEEcCCc-eEEee-eeeE------EecCCeEEEEeCC--CceEEEEEcccCCCCCeEEE
Q psy16425 3 ARMLIEIGEMLMA---ESTVAWLRVDTQ-TILTI-QTHV------ITKNHRIGVTHSE--TKAWYLHIREVRESDRGWYM 69 (163)
Q Consensus 3 ~~~~~~~~~~~~~---~~~i~W~k~~~~-~~~~~-~~~~------~~~~~r~~~~~~~--~~~~~L~i~~v~~~d~G~Y~ 69 (163)
.++.|.|...+.+ .+.|.|++.+.. .+... .+.. ....+|+.+.... .++++|.|.+++.+|+|.|+
T Consensus 22 ~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~v~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~ 101 (139)
T 1pko_A 22 DEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESIGEGKVALRIQNVRFSDEGGYT 101 (139)
T ss_dssp SCEEEEEEEESCCCCTTSEEEEEEC--CCEEEEEETTEECGGGSCSTTTTSEEEECTTGGGTEEEEEESSCCGGGCEEEE
T ss_pred CCEEEeeEccCCCCCCceEEEEEECCCCceEEEEeCCcccccccCcccCCceEEccccccCCeEEEEEccCCHHHCEEEE
Confidence 4688888876544 378999995432 22111 1110 1224677776542 35679999999999999999
Q ss_pred EEEEeCC-CceEeEEEEEEc
Q psy16425 70 CQVNTDP-MKSQVGYLEVVV 88 (163)
Q Consensus 70 C~~~~~~-~~~~~~~l~v~~ 88 (163)
|.+.+.. .....+.|.|..
T Consensus 102 C~v~~~~~~~~~~~~L~V~~ 121 (139)
T 1pko_A 102 CFFRDHSYQEEAAVELKVED 121 (139)
T ss_dssp EEEEETTEEEEEEEEEEEEC
T ss_pred EEEEcCCCceEEEEEEEEec
Confidence 9997653 334455677763
No 320
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.04 E-value=3.5e-09 Score=63.71 Aligned_cols=83 Identities=10% Similarity=0.085 Sum_probs=54.4
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeee--eeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCceE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQ--THVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKSQ 80 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~--~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~ 80 (163)
.++.+.|...+ .+.+.||+ ++..+.... ........|+.+...+ ...+|.|.+++.+|+|.|+|...+ ....
T Consensus 24 ~~a~f~C~vs~--~p~v~W~k-nG~~l~~~~~~~~~~~~~~r~~i~~~g-~~~~L~I~~v~~~D~G~Y~~~~~~--~~~s 97 (112)
T 2e6q_A 24 EDAVFSLDLST--IIQGTWFL-NGEELKSNEPEGQVEPGALRYRIEQKG-LQHRLILHAVKHQDSGALVGFSCP--GVQD 97 (112)
T ss_dssp CEEEEEEEESS--CCCCEEEE-SSCBCCSSCCCTTSCTTSCEEEECCBT-TEEEEEEESCCSTTCSEEEEEEET--TEEE
T ss_pred CcEEEEEEECC--CCeEEEEE-CCEECccCcccccccccccEEEEEeCC-cEEEEEECCCCHHHCccEEEEEEC--CeeE
Confidence 46788888876 77899999 666663211 0000000166655443 345899999999999999886532 3355
Q ss_pred eEEEEEEcCCc
Q psy16425 81 VGYLEVVVPPD 91 (163)
Q Consensus 81 ~~~l~v~~~p~ 91 (163)
.+.|.|..+|.
T Consensus 98 sA~L~V~~~p~ 108 (112)
T 2e6q_A 98 SAALTIQESSG 108 (112)
T ss_dssp EEEEEEECSSC
T ss_pred EEEEEEeCCCc
Confidence 77888887764
No 321
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.04 E-value=2.2e-10 Score=68.53 Aligned_cols=67 Identities=24% Similarity=0.408 Sum_probs=52.0
Q ss_pred CCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceE----EeceEEEEcchhhhHhh
Q psy16425 89 PPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQE----DFPFFKRTKKKKKKKKK 157 (163)
Q Consensus 89 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~----~~~~l~i~~v~~~~~~~ 157 (163)
+|.+...+ ....+.+|+++.|.|.+.|.|.|.+.|++++..+....+... ....|.|.+++.+|.+.
T Consensus 13 pP~f~~~p--~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 83 (107)
T 3knb_B 13 PPCFLRFP--RPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGV 83 (107)
T ss_dssp EEEEEECC--CCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEE
T ss_pred CCEEEeCC--CcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEE
Confidence 34444433 356788999999999999999999999999999876654432 22479999999999763
No 322
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.03 E-value=1.8e-10 Score=68.08 Aligned_cols=67 Identities=31% Similarity=0.602 Sum_probs=50.8
Q ss_pred CCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCc--eE----EeceEEEEcchhhhHhh
Q psy16425 89 PPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNG--QE----DFPFFKRTKKKKKKKKK 157 (163)
Q Consensus 89 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~--~~----~~~~l~i~~v~~~~~~~ 157 (163)
+|.+...+ ....+.+|+++.|.|.+.|.|.|.+.|++++..+...... .. ....|.|.+++.+|.+.
T Consensus 5 PP~i~~~p--~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~ 77 (100)
T 3knb_A 5 PPKIEALP--SDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGL 77 (100)
T ss_dssp EEEECCCC--SEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEE
T ss_pred CCEEEeCC--CcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEE
Confidence 34444433 3677899999999999999999999999999988654322 11 23579999999999763
No 323
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.03 E-value=8.3e-09 Score=74.39 Aligned_cols=117 Identities=12% Similarity=0.186 Sum_probs=72.4
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.|.|...+.|.+.|.|++ ++..+.. ....++.....+ ....|.|.+++.+|+|.|+|.+.|. +.....
T Consensus 116 ~~~~l~C~~~g~p~~~i~W~~-~g~~l~~------~~~~~~~~~~~~-~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~ 187 (389)
T 2jll_A 116 NPINISCDVKSNPPASIHWRR-DKLVLPA------KNTTNLKTYSTG-RKMILEIAPTSDNDFGRYNCTATNHIGTRFQE 187 (389)
T ss_dssp CCEEEEECEEEESCCEEEEEE-TTEESSC------TTCTTEEEEECS-SCEEEEECCCSTTSSEEEEEEEEETTEEEEEE
T ss_pred CEEEEEEEEEecCCCeEEEEE-CCccCCc------ccCceEEEeccC-CEEEEEECCCChhhCEEEEEEEEcCCCcEEEE
Confidence 357889999999999999999 5544321 111244444332 3458999999999999999999776 333444
Q ss_pred EEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEecc----CCCC--eEEEEECCe
Q psy16425 82 GYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASG----SPKP--NITWRREGG 130 (163)
Q Consensus 82 ~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~----~p~p--~v~W~~~~~ 130 (163)
+.+.+...|.... ........+..+.|.|.... .|.. .+.|..++.
T Consensus 188 ~~l~v~~~P~~P~---~~~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~ 239 (389)
T 2jll_A 188 YILALADVPSSPY---GVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVAS 239 (389)
T ss_dssp EEEEECCCCCCCE---EEEEEEECSSCEEEEEECCSCCTTSCEEEEEEEEEETTC
T ss_pred EEEEecCCCCCCc---ceEEeeccCCEEEEEEeCCCCCCCcceEEEEEEEEECCC
Confidence 4555544443221 11222334567888887432 2322 467877654
No 324
>4ei6_A Valpha1 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_C 4elk_A 4elm_E* 3qeu_A 1ao7_D 3qdj_D 3qdg_D 3qfj_D 1qsf_D 1qse_D* 3d39_D* 3d3v_D* 3h9s_D 3pwp_D 2gj6_D 3utp_D* 3uts_D 1qrn_D 3hg1_D 3rdt_A ...
Probab=99.02 E-value=1.3e-09 Score=72.58 Aligned_cols=134 Identities=14% Similarity=0.122 Sum_probs=77.6
Q ss_pred ceeEEEeeeeccCCCEEEEEEcC-Cce---EEeeeeeEEecCCeEEEEeC-CCceEEEEEcccCCCCCeEEEEEEEeCC-
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVD-TQT---ILTIQTHVITKNHRIGVTHS-ETKAWYLHIREVRESDRGWYMCQVNTDP- 76 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~-~~~---~~~~~~~~~~~~~r~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~~~~~~- 76 (163)
..+.|.|.........+.||+.. +.. +...........+|+....+ ....++|+|.+++++|+|.|.|.+....
T Consensus 18 ~sVtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~lq~~DsG~Y~Ca~~~~~~ 97 (208)
T 4ei6_A 18 GMASLNCTSSDRNFQYFWWYRQHSGEGPKALMSIFSDGDKKEGRFTAHLNKASLHVSLHIRDSQPSDSALYFCAASEQNN 97 (208)
T ss_dssp CCEECEEEECCTTEEEEEEEEECTTSCCEEEEECCSSEEEEETTEEEEEBTTTTBC-CEECSCCGGGCEEEEEEEEECCS
T ss_pred CCEEEEEEEcCCCCceEEEEEeCCCCCcEEEEEECCCCcccCCcEEEEEcCCCCEEEEEEEeCcccCCCcEEEEEecCCC
Confidence 45788888766555689999863 111 11111111114577777643 3467899999999999999999985321
Q ss_pred -----CceEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccC-CCCeEEEEECCeEEEecCCc
Q psy16425 77 -----MKSQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGS-PKPNITWRREGGELIAQGNG 138 (163)
Q Consensus 77 -----~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p~v~W~~~~~~~~~~~~~ 138 (163)
.......|.|....... .|. ..........+.|.|.+.+. |...++|.+++..+...+..
T Consensus 98 ~~~~~~fG~GT~L~V~~~~~~~-~Ps-Vf~l~~~~~~~tl~Cl~~~f~P~i~v~~~~~~~~~~~~~~~ 163 (208)
T 4ei6_A 98 YAQGLTFGLGTRVSVFPYIQNP-DPA-VYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCV 163 (208)
T ss_dssp SCCCCEECCCEEEEEECCCSSC-CCE-EEEEEBSSCTTCEEEEEESCCTTCCCCCCSSTTCEECCCEE
T ss_pred ccccccCCCCEEEEEeCcccCC-CCE-EEEcccCCCCceEEEEeeccCCceEeeecccCcEEEeCCEE
Confidence 11233456665421000 010 00011111236789999875 53469999998877655443
No 325
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.02 E-value=6.7e-10 Score=64.21 Aligned_cols=56 Identities=13% Similarity=0.255 Sum_probs=43.4
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCC
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPM 77 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~ 77 (163)
..+.|.|...+.|.+.+.|++ ++..+. ... ...|.|.+++.+|+|.|+|.+.+...
T Consensus 19 ~~~~l~C~~~g~p~p~i~W~~-~~~~~~--------~~~----------~~~L~i~~v~~~d~G~Y~C~a~n~~g 74 (91)
T 3bfo_A 19 STLVLQCVAVGSPIPHYQWFK-NELPLT--------HET----------KKLYMVPYVDLEHQGTYWCHVYNDRD 74 (91)
T ss_dssp SCEEEECEEECSSCCEEEEEE-TTEECT--------TCC----------SSEEEESSCCGGGCEEEEEEEECSSC
T ss_pred CcEEEEEEeccCCCCEEEEEc-CCeeCC--------cCC----------CCeEEECCCCHHhCEEEEEEEEcCCC
Confidence 468899999999999999999 554331 111 12799999999999999999977633
No 326
>1oga_D T-cell receptor alpha chain V region, beta-2-microglobulin; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2xna_A 2xn9_A 2vlm_D 2vlk_D 2vlj_D 2vlr_D 2cdf_A 2wbj_C* 3qdm_D 3qeq_D
Probab=99.02 E-value=4.3e-09 Score=70.63 Aligned_cols=118 Identities=16% Similarity=0.208 Sum_probs=70.5
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCC-c---eE-EeeeeeEEecCCeEEEEeC-CCceEEEEEcccCCCCCeEEEEEEEeCC
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDT-Q---TI-LTIQTHVITKNHRIGVTHS-ETKAWYLHIREVRESDRGWYMCQVNTDP 76 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~-~---~~-~~~~~~~~~~~~r~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~~~~~~ 76 (163)
..+.|.|... .....+.||+... . .+ +..........+|+.+..+ ..++++|.|.+++.+|+|.|.|.+....
T Consensus 17 ~~vtL~C~~~-~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~v~~~Dsg~Y~C~~~~~~ 95 (215)
T 1oga_D 17 ENLTVYCNSS-SVFSSLQWYRQEPGEGPVLLVTVVTGGEVKKLKRLTFQFGDARKDSSLHITAAQPGDTGLYLCAGAGSQ 95 (215)
T ss_dssp CCEEEEEECS-SCCSCEEEEEECTTSCCEEEEEECSTTCEEEETTEEEEECTTSSEEEEEESSCCGGGCEEEEEEEECTT
T ss_pred CCEEEEEEEc-CCCceEEEEEeCCCCCcEEEEEEcCCCCcccCCCEEEEEcCCCCEEEEEEccCCcccCceEEEEEeccc
Confidence 4678888763 3456799998642 1 11 1111111223578887754 3467899999999999999999996431
Q ss_pred C---ceEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEecc-CCCCeE
Q psy16425 77 M---KSQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASG-SPKPNI 123 (163)
Q Consensus 77 ~---~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p~v 123 (163)
. ......|.|...+... .|. .......++.+.|.|.+.+ +|.|.+
T Consensus 96 ~~~~fg~gt~L~V~~~~~~~-~P~-V~~~~~~~~~vtL~C~~~gf~P~p~v 144 (215)
T 1oga_D 96 GNLIFGKGTKLSVKPNIQNP-DPA-VYQLRDSKSSDKSVCLFTDFDSQTNV 144 (215)
T ss_dssp SSEEECCCEEEEEECCCSSC-CCE-EEEEEBSSSSSCEEEEEESCCTTCCC
T ss_pred ccceeCCCEEEEEeccCCCc-CCE-EEEcCCCCCCeEEEEEccccccCccc
Confidence 1 1123467776532111 010 0111112347899999987 788866
No 327
>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptv_A
Probab=99.01 E-value=3.1e-09 Score=63.61 Aligned_cols=82 Identities=26% Similarity=0.362 Sum_probs=53.1
Q ss_pred ceeEEEeee-eccCCCEEEEEEcCCceEEeee---ee-EE--ecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC
Q psy16425 3 ARMLIEIGE-MLMAESTVAWLRVDTQTILTIQ---TH-VI--TKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD 75 (163)
Q Consensus 3 ~~~~~~~~~-~~~~~~~i~W~k~~~~~~~~~~---~~-~~--~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 75 (163)
..+.|.|.. .+.+.+.|.||+..+..+.... .. .. ...+|+.+.. ++++|.|.+++.+|+|.|.|.+.+.
T Consensus 19 ~~v~L~C~~~~~~~~~~v~W~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~---~~~sL~I~~v~~~DsG~Y~C~v~~~ 95 (110)
T 2ptt_A 19 SNVTLKIHKDPLGPYRRITWLHTKNQKILEYNYNSTKTIFESEFKGRVYLEE---NNGALHISNVRKEDKGTYYMRVLRE 95 (110)
T ss_dssp SCEEECSCSSCCCSCSEEEEEESTTBEEEEEETTSCEEECSSTTTTTEEECT---TTCCEEESSCCGGGCEEEEEEEESS
T ss_pred CcEEEeCCccCCCCcCEEEEEecCCccEEEEECCCCceeeccccCCcEEEeC---CCccEEECCCCcccCeEEEEEEEcC
Confidence 468888987 6677789999994343332110 10 11 1225666542 3458999999999999999999655
Q ss_pred CCceEeEEEEEE
Q psy16425 76 PMKSQVGYLEVV 87 (163)
Q Consensus 76 ~~~~~~~~l~v~ 87 (163)
......+.|.|.
T Consensus 96 ~~~~~~~~L~V~ 107 (110)
T 2ptt_A 96 TENELKITLEVF 107 (110)
T ss_dssp SBCCEEEEEEEE
T ss_pred CCcEEEEEEEEE
Confidence 433445556655
No 328
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=99.01 E-value=2.3e-09 Score=64.00 Aligned_cols=72 Identities=17% Similarity=0.275 Sum_probs=49.6
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCC-ce---EEee-eeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDT-QT---ILTI-QTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD 75 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~-~~---~~~~-~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 75 (163)
.++.|.|...+.+.+.|.||+... .. +... .........|+.... ..+.++|.|.+++++|+|.|.|.+.+.
T Consensus 17 ~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~DsG~Y~C~~~n~ 93 (108)
T 1jhl_L 17 ETITINCRASKSISKSLAWYQEKPGKTNNLLIYSGSTLQSGIPSRFSGSG-SGTDFTLTISSLEPEDFAMYICQQHNE 93 (108)
T ss_dssp SCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-SSSEEEEEECSCCTTCCSEEEEEECSS
T ss_pred CCEEEEeEECCCCCceEEEEEECCCCCCEEEEEcCCCcCCCCCceEEEEe-cCCEEEEEECCCCHHHCEEEEEEEccC
Confidence 468899998888889999999642 11 1111 110011246776654 335678999999999999999999654
No 329
>3gsn_A RA14 TCR alpha chain (TRAV24, TRAJ49); HLA, human cytomegalovirus, PP65, T cell receptor (TCR), immune response, public response; 2.80A {Homo sapiens}
Probab=99.01 E-value=1.9e-10 Score=76.22 Aligned_cols=128 Identities=16% Similarity=0.214 Sum_probs=76.5
Q ss_pred ceeEEEeeeeccCCCEEEEEEcC-Cce---EEee-eeeEEecCCeEEEEeC-CCceEEEEEcccCCCCCeEEEEEEEeCC
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVD-TQT---ILTI-QTHVITKNHRIGVTHS-ETKAWYLHIREVRESDRGWYMCQVNTDP 76 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~-~~~---~~~~-~~~~~~~~~r~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~~~~~~ 76 (163)
..+.|.|.........+.||+.. +.. +... ........+|+....+ ....++|.|.+++.+|+|.|.|.+....
T Consensus 16 ~svtL~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~l~~~DsG~Y~Ca~~~~~ 95 (199)
T 3gsn_A 16 DSTNFTCSFPSSNFYALHWYRWETAKSPEALFVMTLNGDEKKKGRISATLNTKEGYSYLYIKGSQPEDSATYLCARNTGN 95 (199)
T ss_dssp CCCEEEEECCCTTCCCEEEEEECTTSCCEEEEEECSTTCCCEETTEECCCBTTTTEEEEEBSSCCGGGCEEEEEEEESSS
T ss_pred CCEEEEEEEcCCCCCEEEEEEECCCCCcEEEEEECCCCCccccCceEEEECCCCCEEEEEEccCcccCCccEEEEEcccc
Confidence 45788888766556689999863 211 1111 1111112456665532 3467899999999999999999985321
Q ss_pred C--ceEeEEEEEEcC---C--cccccCCCCcEEEeCCCcEEEEeEeccC-CCCeEEEEECCeEEEecCC
Q psy16425 77 M--KSQVGYLEVVVP---P--DILDYPTSTDMVIREGSNVTLKCAASGS-PKPNITWRREGGELIAQGN 137 (163)
Q Consensus 77 ~--~~~~~~l~v~~~---p--~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p~v~W~~~~~~~~~~~~ 137 (163)
. ......|.|... + .+.. +.. ....+.|.|.+.+. |...+.|.+++..+.....
T Consensus 96 ~~~fG~GT~L~V~~~~~~~~P~V~~-~~~------~~~~~tl~Cl~~gf~P~i~~~~~~~~~~~~~~~t 157 (199)
T 3gsn_A 96 QFYFGTGTSLTVIPNIQNPDPAVYQ-LRD------SKSSDKSVCLFTDFDSQTNVSQSKDSDAYITDKT 157 (199)
T ss_dssp CEEECSCEEEEEECCCSSCCCEEEE-CCC------SSSSSSCCEEEETCCTTCCSSCSSCSSEEECCCB
T ss_pred cccCCCCEEEEEecccCCCCCEEEE-ccc------CCCCceEEEEeecccCCeEeEeccCCCeEecCce
Confidence 1 122345666542 1 1111 110 11236789999875 5446899999988765443
No 330
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=98.99 E-value=4e-09 Score=62.77 Aligned_cols=74 Identities=19% Similarity=0.326 Sum_probs=51.6
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCceEeE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKSQVG 82 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~ 82 (163)
..+.|.|...+. +.|.|++ ++..+ ....++.+...+ ...+|.|.+++.+|+|.|+|.+. .....+
T Consensus 24 ~~v~l~C~~~~~--p~v~W~k-~~~~~--------~~~~~~~~~~~~-~~~~L~I~~v~~~D~G~Y~C~a~---n~~~~~ 88 (108)
T 2dm7_A 24 ATATLQCELSKV--APVEWKK-GPETL--------RDGGRYSLKQDG-TRCELQIHDLSVADAGEYSCMCG---QERTSA 88 (108)
T ss_dssp SCEEEEEEBSSS--CCCEEES-SSSBC--------CSSSSCEEEEET-TEEEEEESSCCTTTCSEEEEEET---TEEEEE
T ss_pred CcEEEEEEeCCC--CeeEEEE-CCEEC--------CCCCCEEEEecC-CEEEEEECCCCcccCEEEEEEEc---CCEEEE
Confidence 357788877654 6899999 45443 223455555433 34579999999999999999993 345666
Q ss_pred EEEEEcCCc
Q psy16425 83 YLEVVVPPD 91 (163)
Q Consensus 83 ~l~v~~~p~ 91 (163)
.|.|...|.
T Consensus 89 ~l~V~~~p~ 97 (108)
T 2dm7_A 89 TLTVRALPA 97 (108)
T ss_dssp ECEEECCCS
T ss_pred EEEEecCCH
Confidence 788877554
No 331
>1lp9_E T-cell receptor alpha chain; immunoregulatory complex, class I MHC:TCR CO-crystal, immune; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 2j8u_E 2jcc_E 2uwe_E 1nfd_A*
Probab=98.98 E-value=1.4e-09 Score=71.92 Aligned_cols=117 Identities=14% Similarity=0.161 Sum_probs=70.2
Q ss_pred ceeEEEeeeeccCCCEEEEEEcC-Cce---EEe-eeeeEEecCCeEEEEeCC-CceEEEEEcccCCCCCeEEEEEEEeC-
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVD-TQT---ILT-IQTHVITKNHRIGVTHSE-TKAWYLHIREVRESDRGWYMCQVNTD- 75 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~-~~~---~~~-~~~~~~~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~~~~~- 75 (163)
..+.|.|.........|.||+.. +.. +.. .........+|+.+..+. .++++|.|.+++.+|+|.|.|.+.+.
T Consensus 17 ~~v~L~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~~~ 96 (194)
T 1lp9_E 17 LPVMLNCTYQSTYSPFLFWYVQHLNEAPKLLLKSFTDNKRPEHQGFHATLHKSSSSFHLQKSSAQLSDSALYYCALFLAS 96 (194)
T ss_dssp SCEEECEEEECSSSCCEEEEEECTTSCCEEEEESCSSTTCCCCSSCEECCBGGGTBCCEEESSCCGGGCEEEEEEEEECS
T ss_pred CCEEEEEEeCCCCCceEEEEEeCCCCCeEEEEEEcCCCCcccCCCeEEEecCCCCEEEEEEcccCcccCeeEEEEEeccc
Confidence 46788888766666789999964 221 111 111111235677766432 35678999999999999999999652
Q ss_pred ---CC--ceEeEEEEEEcCCcccccCCCCcEEE--eCCCcEEEEeEecc-CCCCeE
Q psy16425 76 ---PM--KSQVGYLEVVVPPDILDYPTSTDMVI--REGSNVTLKCAASG-SPKPNI 123 (163)
Q Consensus 76 ---~~--~~~~~~l~v~~~p~~~~~~~~~~~~~--~~g~~~~l~C~~~~-~p~p~v 123 (163)
.. ......|.|...+.. ..| ...+ ...+.+.|.|.+.+ +|.|.|
T Consensus 97 ~~~~~~~~g~gt~L~V~~~~~~-~~P---~V~~~~~~~~~~tL~Cl~~gf~P~~~V 148 (194)
T 1lp9_E 97 SSFSKLVFGQGTSLSVVPNIQN-PEP---AVYQLKDPRSQDSTLCLFTDFDSQINV 148 (194)
T ss_dssp SSSCEEEECCCEEEEEECCCSS-CCC---EEEEEECTTSSSCEEEEEESCCTTSCC
T ss_pred CCcceeeeccCceEEecCcCCC-CCC---eeEecCCCCCCcEEEEEeecccCCccc
Confidence 11 112346666543110 001 1111 12346899999988 688877
No 332
>1zox_A CLM-1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, structural genomics, PSI, protein structure initiative; 2.10A {Mus musculus}
Probab=98.98 E-value=7.3e-09 Score=62.25 Aligned_cols=88 Identities=13% Similarity=0.208 Sum_probs=54.8
Q ss_pred ceeEEEeeeeccCC-CEEEEEEcCCc--e--EEee-eeeEEecCCeEEEEeC-CCceEEEEEcccCCCCCeEEEEEEEeC
Q psy16425 3 ARMLIEIGEMLMAE-STVAWLRVDTQ--T--ILTI-QTHVITKNHRIGVTHS-ETKAWYLHIREVRESDRGWYMCQVNTD 75 (163)
Q Consensus 3 ~~~~~~~~~~~~~~-~~i~W~k~~~~--~--~~~~-~~~~~~~~~r~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 75 (163)
..+.|.|....... ..+.||+.... . +... +.......+|+.+... ..+.++|.|.+++.+|+|.|.|.+.+.
T Consensus 17 ~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~~~~~DsG~Y~C~v~~~ 96 (113)
T 1zox_A 17 GSLTVQCRYTSGWKDYKKYWCQGVPQRSCKTLVETDASEQLVKKNRVSIRDNQRDFIFTVTMEDLRMSDAGIYWCGITKG 96 (113)
T ss_dssp SCEEEEEEECGGGTTSCEEEEESSSGGGCEEEEECCSSSCCEEETTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCS
T ss_pred CcEEEEeECCCCcccceEEEEeCCCCCCCeEEEEecCccccccCCCEEEEECCcCCEEEEEEccCCHHHCEEEEEeeEcC
Confidence 46788888765443 36999996421 1 1111 1111123467776643 346789999999999999999999655
Q ss_pred C-CceEeEEEEEEcCC
Q psy16425 76 P-MKSQVGYLEVVVPP 90 (163)
Q Consensus 76 ~-~~~~~~~l~v~~~p 90 (163)
+ .....+.|.|..+|
T Consensus 97 ~~~~~~~v~L~V~~~p 112 (113)
T 1zox_A 97 GLDPMFKVTVNIGPVP 112 (113)
T ss_dssp SSCCEEEEEEEEECC-
T ss_pred CCCccEEEEEEEEcCC
Confidence 3 33455566665443
No 333
>1neu_A Myelin P0 protein; structural protein, glycoprotein, transmembrane, phosphorylation, immunoglobulin fold, signal; 1.90A {Rattus norvegicus} SCOP: b.1.1.1
Probab=98.98 E-value=5e-09 Score=63.81 Aligned_cols=88 Identities=18% Similarity=0.189 Sum_probs=53.3
Q ss_pred ceeEEEeeeec----cCCCEEEEEEcCCc---e--EEee-eeeEE-----ecCCeEEEEeC-CCceEEEEEcccCCCCCe
Q psy16425 3 ARMLIEIGEML----MAESTVAWLRVDTQ---T--ILTI-QTHVI-----TKNHRIGVTHS-ETKAWYLHIREVRESDRG 66 (163)
Q Consensus 3 ~~~~~~~~~~~----~~~~~i~W~k~~~~---~--~~~~-~~~~~-----~~~~r~~~~~~-~~~~~~L~i~~v~~~d~G 66 (163)
.++.|.|.... .+...|.|++.+.. . +... .+... ...+|+.+... ..++++|.|.+++.+|+|
T Consensus 15 ~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D~G 94 (124)
T 1neu_A 15 SQVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPSWKDGSIVIHNLDYSDNG 94 (124)
T ss_dssp SCEEECCEEECSSCCCSCCEEEEEEEETTCCCCEEEEEEETTEEEECSSSTTTTCEEECCBGGGTBCCEEECSCCGGGCE
T ss_pred CeEEEEeEEeCCCCCCCceEEEEEEcCCCCCceEEEEEecCCeeccccCccccCcEEEecCCcCCeEEEEEccCChhhCE
Confidence 46788888643 25688999985431 1 2211 11111 12567776543 134568999999999999
Q ss_pred EEEEEEEeCCC---ceEeEEEEEEcCC
Q psy16425 67 WYMCQVNTDPM---KSQVGYLEVVVPP 90 (163)
Q Consensus 67 ~Y~C~~~~~~~---~~~~~~l~v~~~p 90 (163)
.|.|.+.+... ....+.|.|...|
T Consensus 95 ~Y~C~v~~~~~~~~~~~~v~L~V~~~p 121 (124)
T 1neu_A 95 TFTCDVKNPPDIVGKTSQVTLYVFEKV 121 (124)
T ss_dssp EEEEEEEC----CCEEEEEEEEEEC--
T ss_pred EEEEEEEcCCCCcCcEeeEEEEEecCC
Confidence 99999976532 2445566666554
No 334
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=98.98 E-value=5.9e-10 Score=64.70 Aligned_cols=68 Identities=13% Similarity=0.151 Sum_probs=49.2
Q ss_pred CCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceE--Ee--ceEEEEcchhhhHhh
Q psy16425 89 PPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQE--DF--PFFKRTKKKKKKKKK 157 (163)
Q Consensus 89 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~--~~--~~l~i~~v~~~~~~~ 157 (163)
|+.+..........+.+|+++.|.|.+.+ |.|.+.|++||..+........ .+ ..|.|.+++.+|.+.
T Consensus 4 P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~ 75 (91)
T 2lvc_A 4 PVHIVDPREHVFVHAITSECVMLACEVDR-EDAPVRWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGE 75 (91)
T ss_dssp CCCCCBCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSE
T ss_pred CcEEeccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEECCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEE
Confidence 44444422222344568999999999866 8889999999999876665543 22 369999999999864
No 335
>3bn3_B ICAM-5, intercellular adhesion molecule 5, telencephalin; I domain, integrin, allosteric mobility, cell adhesi immune system; HET: NAG; 2.10A {Homo sapiens}
Probab=98.97 E-value=1.5e-08 Score=66.84 Aligned_cols=116 Identities=15% Similarity=0.170 Sum_probs=76.0
Q ss_pred cceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCC-CceE
Q psy16425 2 AARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDP-MKSQ 80 (163)
Q Consensus 2 ~~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~-~~~~ 80 (163)
++.+.+.|...-..+..+.|...-+.... ..+.....+.|.+++ +|++.|.|.++..+ ....
T Consensus 17 G~Sv~l~Cs~~c~~p~~~~~~t~l~~~~~----------------~~g~~~~~~~ls~vs-~d~~~~~C~~~c~~~~~~~ 79 (196)
T 3bn3_B 17 GGSLWLNCSTNCPRPERGGLETSLRRNGT----------------QRGLRWLARQLVDIR-EPETQPVCFFRCARRTLQA 79 (196)
T ss_dssp TEEEEEEEEECCSSCSEEEEECSSEEEEE----------------EEETTEEEEEEEEEC-SSEECCEEEEEETTEEEEE
T ss_pred CCeEEEEEeCCCCCCCccEEEEccCCeeE----------------ccccCceEEEEEEEc-cCCCceEEEEECCCCceEE
Confidence 34677778775333336777642111111 001111248899999 88888999986543 4456
Q ss_pred eEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEecc-CCCCe--EEEEECCeEEEec
Q psy16425 81 VGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASG-SPKPN--ITWRREGGELIAQ 135 (163)
Q Consensus 81 ~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p~--v~W~~~~~~~~~~ 135 (163)
.+.|.|+.+|........ ...+.+|+.++|.|.+.+ .|... ++|++++..+...
T Consensus 80 ~v~l~Vy~~P~~v~i~~~-~~~~~~G~~~tL~C~v~~~~P~~~L~i~wlkg~~~l~~~ 136 (196)
T 3bn3_B 80 RGLIRTFQRPDRVELMPL-PPWQPVGENFTLSCRVPGAGPRASLTLTLLRGAQELIRR 136 (196)
T ss_dssp ECEEEEEBCCCCCEECCC-CSSEETTSEEEEEEEETTCBCGGGEEEEEEETTEEEEEE
T ss_pred EEEEEEecCCCcCEEccC-CccccCCCcEEEEEEeCCccCCCCcEEEEEeCCEEeecc
Confidence 678888888876554432 223788999999999987 56554 8999999987544
No 336
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=98.96 E-value=4.4e-09 Score=63.31 Aligned_cols=88 Identities=18% Similarity=0.214 Sum_probs=53.0
Q ss_pred ceeEEEeee-eccCCC----EEEEEEcCCce--EEee--eeeEEecCCeEEEEeCCC----ceEEEEEcccCCCCCeEEE
Q psy16425 3 ARMLIEIGE-MLMAES----TVAWLRVDTQT--ILTI--QTHVITKNHRIGVTHSET----KAWYLHIREVRESDRGWYM 69 (163)
Q Consensus 3 ~~~~~~~~~-~~~~~~----~i~W~k~~~~~--~~~~--~~~~~~~~~r~~~~~~~~----~~~~L~i~~v~~~d~G~Y~ 69 (163)
.++.|.|.. .+.+.+ .|.|++.+... .... ....+...+|+.+..... ++++|.|.+++.+|+|.|.
T Consensus 16 ~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~ 95 (118)
T 3udw_C 16 DSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRVEDEGNYT 95 (118)
T ss_dssp SCEEECCEEECCTTCCCEEEEEEEEETTCSBCSEEEETTTEEEETTCSSEEETTCCTTSCCCBCCEEECSCCGGGCEEEE
T ss_pred CcEEEEEEeECCCCCCCceEEEEEEEcCCCceEEEEeCCCCCccCCcCcEEEecccccCCCCCcEEEEeecChHHCeEEE
Confidence 467888887 344433 49999953221 1111 111122256666654321 2679999999999999999
Q ss_pred EEEEeC--CCceEeEEEEEEcCC
Q psy16425 70 CQVNTD--PMKSQVGYLEVVVPP 90 (163)
Q Consensus 70 C~~~~~--~~~~~~~~l~v~~~p 90 (163)
|.+.+. +.....+.|.|.++|
T Consensus 96 C~v~~~~~~~~~~~~~L~V~~~P 118 (118)
T 3udw_C 96 CLFVTFPQGSRSVDIWLRVLAKP 118 (118)
T ss_dssp EEEEEETTEEEEEEEEEEEEC--
T ss_pred EEEEECCCCCccceEEEEEEeCC
Confidence 999663 234455667776654
No 337
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=98.96 E-value=2e-09 Score=70.11 Aligned_cols=75 Identities=27% Similarity=0.415 Sum_probs=53.3
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCc--eE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMK--SQ 80 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~--~~ 80 (163)
..+.|.|...+.|.+.+.|++ ++..+ ....++.....+ .|.|.+++.+|+|.|+|.+.|.... +.
T Consensus 116 ~~~~l~C~~~g~p~~~v~W~~-~~~~~--------~~~~~~~~~~~~----~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~ 182 (192)
T 2iep_A 116 LKAVLPCTTMGNPKPSVSWIK-GDSAL--------RENSRIAVLESG----SLRIHNVQKEDAGQYRCVAKNSLGTAYSK 182 (192)
T ss_dssp SCEEECCEEEEESCCEEEEEE-TTEEC--------CCCSSEEECTTS----CEEESSCCGGGCEEEEEEEEETTEEEECC
T ss_pred CcEEEEEEEeccCCceEEEEe-CCEEc--------cCCCcEEEecCC----cEEEecCChhhCEEEEEEEEcCCCcEEEE
Confidence 357888988899999999999 55443 223344444433 7999999999999999999876332 33
Q ss_pred eEEEEEEcCC
Q psy16425 81 VGYLEVVVPP 90 (163)
Q Consensus 81 ~~~l~v~~~p 90 (163)
.+.|.|.++|
T Consensus 183 ~~~l~V~~pp 192 (192)
T 2iep_A 183 LVKLEVEVFA 192 (192)
T ss_dssp CEEEEEEC--
T ss_pred EEEEEEEeCC
Confidence 5677777654
No 338
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=98.96 E-value=3.4e-09 Score=70.06 Aligned_cols=81 Identities=26% Similarity=0.366 Sum_probs=52.8
Q ss_pred ceeEEEeee-eccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCc--e
Q psy16425 3 ARMLIEIGE-MLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMK--S 79 (163)
Q Consensus 3 ~~~~~~~~~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~--~ 79 (163)
..+.|.|.. .+.|.+.+.|++ ++..+. ....++... .+ .|.|.+++.+|+|.|+|.+.|.... +
T Consensus 127 ~~~~l~C~~~~~~p~~~v~W~~-~~~~l~-------~~~~~~~~~-~~----~L~i~~~~~~d~G~Y~C~a~N~~g~~~s 193 (212)
T 2v9r_A 127 EPAVMECQPPRGHPEPTISWKK-DGSPLD-------DKDERITIR-GG----KLMITYTRKSDAGKYVCVGTNMVGERES 193 (212)
T ss_dssp SCEEEECBCCCEESCCEEEEEE-TTEEEC-------TTSTTEEEE-TT----EEEESSCCGGGCEEEEEEEEETTEEEEC
T ss_pred CcEEEEEecCCCCCCCEEEEEE-CCccCC-------CCcceEEcc-CC----eEEEeeCCHhhCeeEEEEEecccCceec
Confidence 357888887 888999999999 555442 112333332 22 8999999999999999999876432 2
Q ss_pred EeEEEEEEcCCcccccC
Q psy16425 80 QVGYLEVVVPPDILDYP 96 (163)
Q Consensus 80 ~~~~l~v~~~p~~~~~~ 96 (163)
..+.|.|..+|.+...|
T Consensus 194 ~~~~l~V~~~P~~~~~P 210 (212)
T 2v9r_A 194 EVAELTVLERPSFVKAA 210 (212)
T ss_dssp CCEEEEEEC--------
T ss_pred ceEEEEEEeCchHhhhc
Confidence 24788888888766543
No 339
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=98.95 E-value=6.6e-09 Score=81.15 Aligned_cols=138 Identities=10% Similarity=0.108 Sum_probs=83.2
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCceEeE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKSQVG 82 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~ 82 (163)
+.+.|.|...+.|.+.|.|.+.+.... ... ..++.+......+..+.+..+...+.|.|.|.......
T Consensus 92 g~l~v~c~~~g~P~p~i~W~k~g~~~~-~~~------~~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~~v~~~~----- 159 (731)
T 2v5y_A 92 GLLNVYVKVNNGPLGNPIWNISGDPTR-TWN------RAELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLG----- 159 (731)
T ss_dssp EEEEEEEEETTCCCCSEEEEECCCCCS-SCE------EEEEEECCCTTSCEEEEEEEEECSSCCEEEECCBEEES-----
T ss_pred ceEEEEEecCCCCccceeEEEeCCcCC-cee------EEEEEEeecCCCceEEEEEEEecCCceEEEEeeEEeee-----
Confidence 478899999999999999999543321 100 01122211112233455655666666666653211000
Q ss_pred EEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEE-EE--ECCeEEEecCCc----eEEeceEEEEcchhhhH
Q psy16425 83 YLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNIT-WR--REGGELIAQGNG----QEDFPFFKRTKKKKKKK 155 (163)
Q Consensus 83 ~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~-W~--~~~~~~~~~~~~----~~~~~~l~i~~v~~~~~ 155 (163)
..+..+|.+.. + ....+.+|+++.|.|.+.|.|.|.+. |+ +++..+...... ....+.|+|.++...|.
T Consensus 160 -~~~~~~p~~~~-~--~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d~ 235 (731)
T 2v5y_A 160 -HPCTRTPHFLR-I--QNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDA 235 (731)
T ss_dssp -SCCSSSCEECC-C--CCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEEEEECCSSEEEEEEEECSCCTTTC
T ss_pred -ccccccccccc-c--cceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccccceEEeccccceEEEEEcccccccC
Confidence 01113455442 2 35778899999999999999999988 88 677665433211 12346899999988875
Q ss_pred h
Q psy16425 156 K 156 (163)
Q Consensus 156 ~ 156 (163)
+
T Consensus 236 g 236 (731)
T 2v5y_A 236 G 236 (731)
T ss_dssp E
T ss_pred e
Confidence 4
No 340
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 2.50A {Mus musculus}
Probab=98.94 E-value=3.1e-09 Score=64.10 Aligned_cols=89 Identities=20% Similarity=0.230 Sum_probs=55.2
Q ss_pred ceeEEEeeeec-cCCCEEEEEEcCCc------eEEeee-e-eEEecCCeEEEEeC-CCceEEEEEcccCCCCCeEEEEEE
Q psy16425 3 ARMLIEIGEML-MAESTVAWLRVDTQ------TILTIQ-T-HVITKNHRIGVTHS-ETKAWYLHIREVRESDRGWYMCQV 72 (163)
Q Consensus 3 ~~~~~~~~~~~-~~~~~i~W~k~~~~------~~~~~~-~-~~~~~~~r~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~~ 72 (163)
..+.|.|.... .....+.||+.... .+.... . ......+|+.+... ..++++|.|.+++.+|+|.|.|.+
T Consensus 13 ~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~v 92 (116)
T 2or8_A 13 HPVTLPCTYSTYRGITTTCWGRGQCPSSACQNTLIWTNGHRVTYQKSSRYNLKGHISEGDVSLTIENSVESDSGLYCCRV 92 (116)
T ss_dssp SCEEECCBCCCTTCCCCEEEEESCCCSSSCTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCCGGGCEEEEEEE
T ss_pred CcEEEEEEeeCCCCCcEEEEEEECCCCCCceEEEEEeCCcccCcCCCCeEEEecCCCCCeEEEEECCCCcccCEEEEEEE
Confidence 46788888654 34567999996411 111111 1 11234567765432 235678999999999999999999
Q ss_pred EeCCCc-eEeEEEEEEcCCc
Q psy16425 73 NTDPMK-SQVGYLEVVVPPD 91 (163)
Q Consensus 73 ~~~~~~-~~~~~l~v~~~p~ 91 (163)
.+.+.. .....+.+.+.|.
T Consensus 93 ~~~~~~~~~~~~~~l~V~p~ 112 (116)
T 2or8_A 93 EIPGWFNDQKVTFSLQVKPE 112 (116)
T ss_dssp CCSSTTCCEEEEEEEEEECS
T ss_pred EcCCcccccEEEEEEEECCc
Confidence 665422 2355566665553
No 341
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.94 E-value=7.1e-10 Score=64.76 Aligned_cols=54 Identities=15% Similarity=0.300 Sum_probs=42.7
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD 75 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 75 (163)
..+.|.|...+.|.+.|.|++ ++..+.. . .+..|.|.+++.+|+|.|+|.+.+.
T Consensus 26 ~~v~l~C~~~g~p~~~v~W~k-~~~~~~~--------~----------~~~~L~i~~v~~~d~G~Y~C~a~n~ 79 (96)
T 2ens_A 26 GTVTLTCEVPAQPSPQIHWMK-DGVPLPL--------P----------PSPVLILPEIGPQDQGTYSCVATHS 79 (96)
T ss_dssp CEEEEECCCSSCSSCCCCCEE-SSSBCSS--------C----------CCSEEEEESCCTTTCEEEECEECCS
T ss_pred CeEEEEEEEccCCCCEEEEEE-CCEECcC--------C----------CCCEEEECCCCcccCEEEEEEEEeC
Confidence 468899999899999999999 5544311 0 1128999999999999999999774
No 342
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=98.94 E-value=8.2e-09 Score=66.97 Aligned_cols=73 Identities=22% Similarity=0.386 Sum_probs=51.8
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.|.|...+.|.+.+.|++ ++..+. ...++..... +..|.|.+++.+|+|.|+|.+.|. +.....
T Consensus 114 ~~v~l~C~~~g~p~~~v~W~~-~g~~~~--------~~~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 181 (189)
T 2v5t_A 114 EEMTFSCRASGSPEPAISWFR-NGKLIE--------ENEKYILKGS---NTELTVRNIINSDGGPYVCRATNKAGEDEKQ 181 (189)
T ss_dssp CCEEEECEEEEESCCEEEEEE-TTEECC--------CSSSEEEETT---TTEEEECSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEccCCCCeEEEEE-CCEECc--------CCCcEEEecC---CCEEEEcCCChhhCeeEEEEEEeCCCceeEE
Confidence 357888998889999999999 555442 2233333322 227999999999999999999776 344445
Q ss_pred EEEEEE
Q psy16425 82 GYLEVV 87 (163)
Q Consensus 82 ~~l~v~ 87 (163)
+.|.|.
T Consensus 182 ~~l~V~ 187 (189)
T 2v5t_A 182 AFLQVF 187 (189)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 555554
No 343
>1zxq_A ICAM-2, intercellular adhesion molecule-2; immunoglobulin fold, cell adhesion, glycoprotein, transmembr; HET: NAG; 2.20A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=98.94 E-value=5.3e-08 Score=63.85 Aligned_cols=79 Identities=14% Similarity=0.228 Sum_probs=60.9
Q ss_pred EEEEcccCCCCCeEEEEEEEeCC-CceEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEecc-CCCCe--EEEEECC
Q psy16425 54 YLHIREVRESDRGWYMCQVNTDP-MKSQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASG-SPKPN--ITWRREG 129 (163)
Q Consensus 54 ~L~i~~v~~~d~G~Y~C~~~~~~-~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p~--v~W~~~~ 129 (163)
.|.|.+|+ |+|.|.|.+...+ .....+.+.|+.+|........ ...+.+|+.++|.|.+.+ .|... +.|++++
T Consensus 53 ~l~l~~vs--~~g~~~C~~~c~~~~~~~~~~itVy~~P~~v~i~~~-p~~~~~G~~~tL~C~v~~v~P~~~L~v~llrG~ 129 (192)
T 1zxq_A 53 HYLVSNIS--HDTVLQCHFTCSGKQESMNSNVSVYQPPRQVILTLQ-PTLVAVGKSFTIECRVPTVEPLDSLTLFLFRGN 129 (192)
T ss_dssp EEEEEEEC--SCEEEEEEEEETTEEEEEEEEEEECBCCCCCEEEEE-SSEECTTSEEEEEEEECSCBCGGGEEEEEEETT
T ss_pred EEEEeccc--cCCeeEEEEECCCcceEEEEEEEEEeCCCCceEccC-CccccCCCcEEEEEEeCCeECCCCcEEEEEcCC
Confidence 69999998 7899999996653 4456778899988876554321 235788999999999985 77765 8999999
Q ss_pred eEEEec
Q psy16425 130 GELIAQ 135 (163)
Q Consensus 130 ~~~~~~ 135 (163)
..+...
T Consensus 130 ~~l~~~ 135 (192)
T 1zxq_A 130 ETLHYE 135 (192)
T ss_dssp EEEEEE
T ss_pred EEeeec
Confidence 887544
No 344
>1kgc_D T-cell receptor alpha chain; LC13 clone, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1mi5_D 3kpr_D 3kps_D 3o6f_C 3t0e_C 3pqy_D 2esv_D 3dxa_D 3dx9_A
Probab=98.93 E-value=1.6e-08 Score=67.40 Aligned_cols=116 Identities=14% Similarity=0.100 Sum_probs=70.2
Q ss_pred ceeEEEeeeec-cCCCEEEEEEcCC-c---eEEeeeeeEEecCCeEEEEeC-CCceEEEEEcccCCCCCeEEEEEEEeC-
Q psy16425 3 ARMLIEIGEML-MAESTVAWLRVDT-Q---TILTIQTHVITKNHRIGVTHS-ETKAWYLHIREVRESDRGWYMCQVNTD- 75 (163)
Q Consensus 3 ~~~~~~~~~~~-~~~~~i~W~k~~~-~---~~~~~~~~~~~~~~r~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~~~~~- 75 (163)
.++.|.|...+ .....+.||+... . .+...... ....+|+.+..+ ..++++|.|.+++.+|+|.|.|.+.+.
T Consensus 15 ~~v~L~C~~s~~~~~~~v~Wyrq~~g~~~~~l~~~~~~-~~~~~Rf~~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~~~ 93 (206)
T 1kgc_D 15 EPVHLPCNHSTISGTDYIHWYRQLPSQGPEYVIHGLTS-NVNNRMASLAIAEDRKSSTLILHRATLRDAAVYYCILPLAG 93 (206)
T ss_dssp SCEEEEEEESCCCTTCCEEEEEECTTSCCEEEEEESSS-SEECSSEEEEECTTSSEEEEEESSCCGGGCEEEEEECCCCS
T ss_pred CCEEEEEEEcCCCCCccEEEEEECCCCCcEEEEEECCC-CccCCCEEEEEcCCCCEEEEEECCCCcccCccEEEEEeccc
Confidence 46888888755 3445899998642 1 11111110 112678887754 346789999999999999999998542
Q ss_pred ------CCceEeEEEEEEcCCcccccCCCCcEEEe--CCCcEEEEeEecc-CCCCeE
Q psy16425 76 ------PMKSQVGYLEVVVPPDILDYPTSTDMVIR--EGSNVTLKCAASG-SPKPNI 123 (163)
Q Consensus 76 ------~~~~~~~~l~v~~~p~~~~~~~~~~~~~~--~g~~~~l~C~~~~-~p~p~v 123 (163)
........|.|...+... . +...+. ..+.+.|.|.+.+ +|.|.+
T Consensus 94 ~~~~~~~~~g~gt~L~V~~~~~~~-~---P~V~~~~~~~~~v~L~C~~~g~~P~~~V 146 (206)
T 1kgc_D 94 GTSYGKLTFGQGTILTVHPNIQNP-D---PAVYQLRDSKSSDKSVCLFTDFDSQTNV 146 (206)
T ss_dssp TTCCCCCCCCCCEEEEEECCCSSC-C---CEEEECCCCTTCCCEEEEEESCCTTCCC
T ss_pred CCCcccceECCCEEEEEeCCCCCC-C---CeEEeecCCCCCeEEEEEeeceeccccc
Confidence 112233467776432100 0 111111 1247899999987 688866
No 345
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=98.93 E-value=8.7e-09 Score=61.25 Aligned_cols=80 Identities=15% Similarity=0.229 Sum_probs=46.8
Q ss_pred ceeEEEeeee--ccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeC--CCceEEEEEcccCCCCCeEEEEEEEeCCCc
Q psy16425 3 ARMLIEIGEM--LMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHS--ETKAWYLHIREVRESDRGWYMCQVNTDPMK 78 (163)
Q Consensus 3 ~~~~~~~~~~--~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~--~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~ 78 (163)
..+.|.|... +.+.+.+.|++ ++..+........ .++..... .....+|.|.+++.+|+|.|+|.+.+....
T Consensus 26 ~~v~L~C~~~~~~~~~~~i~W~k-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~ 101 (112)
T 3so5_A 26 SDVSFTCSAASSSDSPMTFAWXX-DNEALQDAEMENY---AHLRAQGGELMEYTTILRLRNVEFTSEGXYQCVISNHFGS 101 (112)
T ss_dssp CCEEEEEEEEESCCCCCEEEEEE-TTEECTTCEEEEE---EETTGGGSSCEEEEEEEEECSCCGGGCEEEEEEEEETTEE
T ss_pred CCEEEEEEEecCCCCCEEEEEcc-CCcccccccccce---eeeeccCCCccccceEEEEeccccccCCeEEEEEEeCCCc
Confidence 4677888877 45568999999 5544321110000 00000000 001348999999999999999999776332
Q ss_pred --eEeEEEEE
Q psy16425 79 --SQVGYLEV 86 (163)
Q Consensus 79 --~~~~~l~v 86 (163)
+..+.|.|
T Consensus 102 ~~s~~~~l~V 111 (112)
T 3so5_A 102 SYSVXAXLTI 111 (112)
T ss_dssp EECCCEEEEE
T ss_pred EEEeEEEEEe
Confidence 34445544
No 346
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=98.92 E-value=3.6e-08 Score=64.25 Aligned_cols=79 Identities=15% Similarity=0.146 Sum_probs=54.7
Q ss_pred ceeEEEeeeeccCCCEEEEEEc-CCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccC-CCCCeEEEEEEEeC-CCce
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRV-DTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVR-ESDRGWYMCQVNTD-PMKS 79 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~-~~d~G~Y~C~~~~~-~~~~ 79 (163)
..+.|.|...+.|.+.+.|++. ++..+.. .....++...... ....|.|.+++ .+|+|.|+|.+.|. +...
T Consensus 108 ~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~-----~~~~~~~~~~~~~-~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~ 181 (190)
T 2wv3_A 108 QDAMMYCKSVGYPHPEWMWRKKENGVFEEI-----SNSSGRFFIINKE-NYTELNIVNLQITEDPGEYECNATNSIGSAS 181 (190)
T ss_dssp SCEEEEEEEECSSCCEEEEEEEETTEEEEC-----CCTTSCEEEEECS-SEEEEEECSCCTTTSCEEEEEEEECSSCEEE
T ss_pred CcEEEEEEeCccCCCceEEEEcCCCceeee-----ecCCCeEEEecCC-CeeEEEEEeccccCCCEEEEEEEEecCCcce
Confidence 3578889999999999999995 2333211 0234556555433 34489999999 69999999999776 4444
Q ss_pred EeEEEEEE
Q psy16425 80 QVGYLEVV 87 (163)
Q Consensus 80 ~~~~l~v~ 87 (163)
..+.|.|.
T Consensus 182 ~~~~l~V~ 189 (190)
T 2wv3_A 182 VSTVLRVR 189 (190)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEE
Confidence 55556554
No 347
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=98.92 E-value=6.1e-09 Score=62.25 Aligned_cols=72 Identities=13% Similarity=0.195 Sum_probs=48.9
Q ss_pred ceeEEEeeeeccCCCEEEEEEcC-Cce---EEeeee-eEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVD-TQT---ILTIQT-HVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD 75 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~-~~~---~~~~~~-~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 75 (163)
..+.|.|...+.+.+.|.||+.. +.. +..... ......+|+.... ...+++|.|.+++++|+|.|.|.+.+.
T Consensus 19 ~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~-~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 95 (109)
T 2q20_A 19 DRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSG-SGTDFTFTISSLQPEDIATYYCQQYDN 95 (109)
T ss_dssp CCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEE-ETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred CcEEEEEeeccCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEec-cCCEEEEEECCCChhhCEEEEEEEeeC
Confidence 46889999887778899999964 221 111111 1011246777654 235678999999999999999999553
No 348
>2ak4_D SB27 T cell receptor alpha chain; bulged epitopes, PMHC/TCR complex, immune system; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kxf_D 3nfj_I 3ffc_D
Probab=98.92 E-value=2.8e-08 Score=66.43 Aligned_cols=117 Identities=11% Similarity=0.117 Sum_probs=69.8
Q ss_pred ceeEEEeeeeccCCC-EEEEEEcC-Cce---EEee-eeeE-EecCCeEEEEeC-CCceEEEEEcccCCCCCeEEEEEEEe
Q psy16425 3 ARMLIEIGEMLMAES-TVAWLRVD-TQT---ILTI-QTHV-ITKNHRIGVTHS-ETKAWYLHIREVRESDRGWYMCQVNT 74 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~-~i~W~k~~-~~~---~~~~-~~~~-~~~~~r~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~~~~ 74 (163)
..+.|.|...+.... .+.||+.. +.. +... .... ....+|+.+..+ ..++++|.|.+++.+|+|.|.|.+.+
T Consensus 19 ~~vtL~C~~s~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~ 98 (211)
T 2ak4_D 19 EDVTLDCVYETRDTTYYLFWYKQPPSGELVFLIRRNSFDEQNEISGRYSWNFQKSTSSFNFTITASQVVDSAVYFCALSG 98 (211)
T ss_dssp CCEEECCEEECSCSSCEEEEEEECTTCCCEEEEEEETTSCSEEEETTEEEEEETTTTEEEEEESSCCGGGCEEEEEEEEC
T ss_pred CCEEEEEEecCCcCceeEEEEEECCCCccEEEEEECCCcCccCcCCCEEEEEcCCCCEEEEEECccccccCceEEEEEEc
Confidence 467888887654444 89999864 221 1111 1110 023567877643 34678999999999999999999964
Q ss_pred CC-----CceEeEEEEEEcCCcccccCCCCcEEE--eCCCcEEEEeEecc-CCCCeE
Q psy16425 75 DP-----MKSQVGYLEVVVPPDILDYPTSTDMVI--REGSNVTLKCAASG-SPKPNI 123 (163)
Q Consensus 75 ~~-----~~~~~~~l~v~~~p~~~~~~~~~~~~~--~~g~~~~l~C~~~~-~p~p~v 123 (163)
.. .......|.|...+... .| ...+ ...+.+.|.|.+.+ +|.|.+
T Consensus 99 ~~~~~~~~~g~gt~L~V~~~~~~~-~P---~V~~~~~~~~~vtL~Cl~~gf~P~~~v 151 (211)
T 2ak4_D 99 FYNTDKLIFGTGTRLQVFPNIQNP-DP---AVYQLRDSKSSDKSVCLFTDFDSQTNV 151 (211)
T ss_dssp SBTTSCCEECCCEEEEEECCCSSC-CC---EEEEEBCCSSSCCEEEEEESCCTTCCC
T ss_pred CCCcceeeECCCEEEEEeCcCCCC-CC---EEEEccCCCCceEEEEEeeeecCCccc
Confidence 21 11233467666432100 01 1111 12347899999987 787766
No 349
>2eys_A NKT15; natural killer T cell receptor, immune system; 2.21A {Homo sapiens} PDB: 2eyr_A 2eyt_A 3huj_E* 3tyf_A 3tzv_A* 3sdx_E* 2po6_C* 2cde_A 3to4_C*
Probab=98.92 E-value=1.9e-08 Score=67.22 Aligned_cols=119 Identities=18% Similarity=0.182 Sum_probs=69.9
Q ss_pred ceeEEEeeeeccCCCEEEEEEcC-Cc---eEEe-eeeeEEecCCeEEEEeC-CCceEEEEEcccCCCCCeEEEEEEEeCC
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVD-TQ---TILT-IQTHVITKNHRIGVTHS-ETKAWYLHIREVRESDRGWYMCQVNTDP 76 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~-~~---~~~~-~~~~~~~~~~r~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~~~~~~ 76 (163)
..+.|.|...+.....+.||+.. +. .+.. .........+|+....+ ..+.++|.|.+++.+|+|.|.|.+.+..
T Consensus 19 ~svtL~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~~~ 98 (210)
T 2eys_A 19 KNCTLQCNYTVSPFSNLRWYKQDTGRGPVSLTIMTFSENTKSNGRYTATLDADTKQSSLHITASQLSDSASYICVVSDRG 98 (210)
T ss_dssp CCEEEEEEECCSSCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEESSCCGGGCEEEEEEEESCS
T ss_pred CCEEEEEEECCCCCCeEEEEEeCCCCCCEEEEEEecCCCCccCCCEEEEEcCCCCEEEEEEccCCcccCceEEEEEEccC
Confidence 46888888776666789999964 21 1111 11011123578887643 3467899999999999999999996521
Q ss_pred ----C--ceEeEEEEEEcCCcccccCCCCcEEEe--CCCcEEEEeEeccC-CCCeEEE
Q psy16425 77 ----M--KSQVGYLEVVVPPDILDYPTSTDMVIR--EGSNVTLKCAASGS-PKPNITW 125 (163)
Q Consensus 77 ----~--~~~~~~l~v~~~p~~~~~~~~~~~~~~--~g~~~~l~C~~~~~-p~p~v~W 125 (163)
. ......|.|...+.. ..| ...+. ....+.|.|.+.+. |.+.+.+
T Consensus 99 ~~~~~~~fg~gt~L~V~~~~~~-~~P---~V~~~~~~~~~~tl~Cl~~gf~P~~~v~~ 152 (210)
T 2eys_A 99 STLGRLYFGRGTQLTVWPDIQN-PDP---AVYQLRDSKSSDKSVCLFTDFDSQTNVSQ 152 (210)
T ss_dssp STTCCEEECCCEEEEEECCCSS-CCC---EEEEECCCSSSSCEEEEEESCCTTCCCCC
T ss_pred CCcccceECCCEEEEEECCCCC-CCC---eEEecCCCCCCceEEEEcccccCCcEecc
Confidence 1 112345666542110 001 11111 12367899999885 4444433
No 350
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=98.91 E-value=6.4e-09 Score=63.37 Aligned_cols=72 Identities=18% Similarity=0.193 Sum_probs=49.1
Q ss_pred ceeEEEeeeeccCCCEEEEEEcC-Cce---EEee-eeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVD-TQT---ILTI-QTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD 75 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~-~~~---~~~~-~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 75 (163)
..+.|.|...+.+.+.|.||+.. +.. +... ........+|+.... ..++++|.|.+++.+|+|.|.|.+.+.
T Consensus 17 ~~v~L~C~~~~~~~~~v~W~r~~~g~~~~~li~~~~~~~~~~~~R~~~~~-~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 93 (120)
T 1mqk_L 17 ETVTITCRASENIYSYLAWYQQKQGKSPQFLVYNAKTLGEGVPSRFSGSG-SGTQFSLKINSLLPEDFGSYYCQHHYG 93 (120)
T ss_dssp CCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred CcEEEEEEeCCCCCceEEEEEECCCCCCEEEEEeCCcCCCCCCceEEEec-cCCEEEEEECCCCHHHCEEEEEEEEeC
Confidence 46889999887778899999964 221 1111 111011246777654 235678999999999999999999654
No 351
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=98.91 E-value=4.5e-09 Score=63.87 Aligned_cols=86 Identities=21% Similarity=0.290 Sum_probs=53.7
Q ss_pred ceeEEEeeeeccCC----CEEEEEEcCC------ceEEe-eeeeE-----EecCCeEEEEeC--CCceEEEEEcccCCCC
Q psy16425 3 ARMLIEIGEMLMAE----STVAWLRVDT------QTILT-IQTHV-----ITKNHRIGVTHS--ETKAWYLHIREVRESD 64 (163)
Q Consensus 3 ~~~~~~~~~~~~~~----~~i~W~k~~~------~~~~~-~~~~~-----~~~~~r~~~~~~--~~~~~~L~i~~v~~~d 64 (163)
..+.|.|...+.+. +.|.|++.+. ..+.. ..... ....+|+.+... ..++++|.|.+++.+|
T Consensus 21 ~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D 100 (126)
T 1eaj_A 21 ETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSD 100 (126)
T ss_dssp SCEEECCBEECCTTCCSCEEEEEEEEETTSSCCSEEEEEEETTEEECTTSSTTTTTEEECCSCGGGTBCCEEECSCCGGG
T ss_pred CCEEEEEEEecCCCCCCceEEEEEEeCCCcCCCceEEEEEeCCeeccccCccccCeeEEEcccccCCeEEEEECcCChHH
Confidence 46788888766554 4599999642 22221 11111 123467776654 2345689999999999
Q ss_pred CeEEEEEEEeCCC-ceEeEEEEEEc
Q psy16425 65 RGWYMCQVNTDPM-KSQVGYLEVVV 88 (163)
Q Consensus 65 ~G~Y~C~~~~~~~-~~~~~~l~v~~ 88 (163)
+|.|.|.+.+... ....+.|.|.+
T Consensus 101 ~G~Y~C~v~~~~~~~~~~~~L~V~~ 125 (126)
T 1eaj_A 101 IGTYQCKVKKAPGVANKKIHLVVLV 125 (126)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CeEEEEEEEcCCccCCcEEEEEEEc
Confidence 9999999976532 23445555543
No 352
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=98.90 E-value=1.2e-08 Score=66.35 Aligned_cols=73 Identities=18% Similarity=0.304 Sum_probs=50.5
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCC-CceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDP-MKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~-~~~~~ 81 (163)
..+.|.|...+.|.+.+.|++.+ ..+.. ....++.....+ .|.|.+++.+|+|.|+|.+.+.. .....
T Consensus 112 ~~~~l~C~~~g~p~p~v~W~~~~-~~~~~------~~~~~~~~~~~~----~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~ 180 (189)
T 2v44_A 112 EDAEVVCRVSSSPAPAVSWLYHN-EEVTT------ISDNRFAMLANN----NLQILNINKSDEGIYRCEGRVEARGEIDF 180 (189)
T ss_dssp SCEEECCEEECSSCCEEEEEEEC---CEE------CCCTTEEECTTS----CEEETTCCGGGCEEEEEEEEETTTTEEEE
T ss_pred CCEEEEEEECcCCCCcEEEEECC-cEEec------cCCCCEEEecCC----cEEEEEcCcccCeEEEEEEEccccCceee
Confidence 36788899999999999999954 33321 123455554443 79999999999999999997764 33333
Q ss_pred EEEEE
Q psy16425 82 GYLEV 86 (163)
Q Consensus 82 ~~l~v 86 (163)
..+.+
T Consensus 181 ~~~~v 185 (189)
T 2v44_A 181 RDIIV 185 (189)
T ss_dssp EEEEE
T ss_pred eeEEE
Confidence 34433
No 353
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=98.90 E-value=1.1e-08 Score=66.67 Aligned_cols=74 Identities=16% Similarity=0.232 Sum_probs=51.4
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.|.|...+.|.+.+.|++ ++..+. ...++.....+ ...+|.|.+++.+|+|.|+|.+.|. +.....
T Consensus 119 ~~~~l~C~~~g~p~~~v~W~~-~~~~~~--------~~~~~~~~~~~-~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 188 (194)
T 2a38_A 119 SQVRLQVRVTGIPTPVVKFYR-DGAEIQ--------SSLDFQISQEG-DLYSLLIAEAYPEDSGTYSVNATNSVGRATST 188 (194)
T ss_dssp EEEEEEEEEEEESCCEEEEEE-TTEECC--------CSSSEEEEEET-TEEEEEEEEECGGGCEEEEEEEEETTEEEEEE
T ss_pred CEEEEEEEEEEecCCeEEEEE-CCEECC--------CCCcEEEEEcC-CEEEEEECCCChhcCeEEEEEEEeCCCceEEE
Confidence 357888988899999999999 555442 23344443332 2347999999999999999999776 333344
Q ss_pred EEEEE
Q psy16425 82 GYLEV 86 (163)
Q Consensus 82 ~~l~v 86 (163)
+.|.|
T Consensus 189 ~~l~V 193 (194)
T 2a38_A 189 AELLV 193 (194)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 44443
No 354
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.90 E-value=2.9e-09 Score=64.05 Aligned_cols=66 Identities=17% Similarity=0.291 Sum_probs=52.1
Q ss_pred CCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceEE----eceEEEEcchhhhHh
Q psy16425 89 PPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQED----FPFFKRTKKKKKKKK 156 (163)
Q Consensus 89 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~----~~~l~i~~v~~~~~~ 156 (163)
+|.+...+ ....+.+|+.+.|.|.+.|.|.|.+.|++++..+....+.... ...|.|.+++.+|.+
T Consensus 7 pp~i~~~~--~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 76 (114)
T 2cqv_A 7 GPQIIQFP--EDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCG 76 (114)
T ss_dssp CCEESCCC--CSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCE
T ss_pred CCEEEeCC--CCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCE
Confidence 45555433 3677899999999999999999999999999887655444432 568999999999876
No 355
>2nw2_A ELS4 TCR alpha chain; T cell receptor, immune system; 1.40A {Homo sapiens} PDB: 2nx5_D 4dzb_A
Probab=98.90 E-value=3.4e-08 Score=65.46 Aligned_cols=118 Identities=15% Similarity=0.149 Sum_probs=66.9
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCC-c---eE-EeeeeeEEecCCeEEEEeC-CCceEEEEEcccCCCCCeEEEEEEEeC-
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDT-Q---TI-LTIQTHVITKNHRIGVTHS-ETKAWYLHIREVRESDRGWYMCQVNTD- 75 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~-~---~~-~~~~~~~~~~~~r~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~~~~~- 75 (163)
..+.|.|.........+.||+... . .+ +...... ...+|+....+ ..+.++|.|.+++.+|+|.|.|.+...
T Consensus 15 ~~vtL~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~-~~~~Rf~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~~ 93 (200)
T 2nw2_A 15 AIVQINCTYQTSGFNGLFWYQQHAGEAPTFLSYNVLDGL-EEKGRFSSFLSRSKGYSYLLLKELQMKDSASYLCAVQASG 93 (200)
T ss_dssp CCEEEEEECCCSSCCCEEEEEECTTSCCEEEEEECSSEE-EEETTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEC---
T ss_pred CCEEEEEEECCCCCceEEEEEeCCCCCcEEEEEEcCCCc-ccCCceEEEecCCCCEEEEEECccCcccCCcEEEEEEcCC
Confidence 468888887666667899998642 1 11 1111111 12578877643 346789999999999999999998541
Q ss_pred --C--CceEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccC-CCCeE
Q psy16425 76 --P--MKSQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGS-PKPNI 123 (163)
Q Consensus 76 --~--~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p~v 123 (163)
. .......|.|...+.. ..|. ..........+.|.|.+.+. |.+.+
T Consensus 94 ~~~~~~fg~gt~L~V~~~~~~-~~P~-V~~~~~~~~~~tl~Cl~~gf~P~~~v 144 (200)
T 2nw2_A 94 GSYIPTFGRGTSLIVHPYIQN-PDPA-VYQLRDSKSSDKSVCLFTDFDSQTNV 144 (200)
T ss_dssp CCCCCEECCCEEEEEECCCSS-CCCE-EEEEEECC--CCEEEEEESCCTTCCC
T ss_pred cceeeeeCCCEEEEEecCccc-CCCe-EEEcCCCCCCceEEEEeecccCCcEe
Confidence 1 1113345666542110 0110 01111122378899999885 44444
No 356
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=98.90 E-value=1.3e-08 Score=66.58 Aligned_cols=74 Identities=18% Similarity=0.246 Sum_probs=52.3
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcc-cCCCCCeEEEEEEEeC-CCceE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIRE-VRESDRGWYMCQVNTD-PMKSQ 80 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~-v~~~d~G~Y~C~~~~~-~~~~~ 80 (163)
..+.|.|...+.|.+.|.|++ ++..+ ....++...... ....|.|.+ ++.+|+|.|+|.+.|. +....
T Consensus 120 ~~~~l~C~~~g~p~p~i~W~~-~~~~~--------~~~~~~~~~~~~-~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~ 189 (197)
T 2j8h_A 120 EVVSIKIPFSGKPDPVITWQK-GQDLI--------DNNGHYQVIVTR-SFTSLVFPNGVERKDAGFYVVCAKNRFGIDQK 189 (197)
T ss_dssp CCCEEEEEEEEESCCEEEEEE-SSCEE--------CSSSSCEEEECS-SEEEEECTTCCCGGGCEEEEEEEEETTEEEEE
T ss_pred CEEEEEEEEEecCCCcEEEEE-CCEEe--------ecCCCEEEEEcC-CceEEEEeCCCCcccCEeEEEEEEeCCCcEeE
Confidence 357888998999999999999 55554 223444443332 345899999 9999999999999776 33344
Q ss_pred eEEEEE
Q psy16425 81 VGYLEV 86 (163)
Q Consensus 81 ~~~l~v 86 (163)
.+.|.|
T Consensus 190 ~~~l~V 195 (197)
T 2j8h_A 190 TVELDV 195 (197)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 445544
No 357
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=98.89 E-value=1.6e-09 Score=64.47 Aligned_cols=72 Identities=19% Similarity=0.343 Sum_probs=48.5
Q ss_pred EEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceE--EeceEEEEcchhhhHh
Q psy16425 83 YLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQE--DFPFFKRTKKKKKKKK 156 (163)
Q Consensus 83 ~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~--~~~~l~i~~v~~~~~~ 156 (163)
.+.+..+|.+...+ ....+.+|+++.|.|.+.|.|.|.+.|++++..+........ .+..|.|.+++.+|.+
T Consensus 4 ~v~~~~~P~~~~~~--~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G 77 (108)
T 3kvq_A 4 TVLERVAPTITGNL--ENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDGNRNLTIRRVRKEDEG 77 (108)
T ss_dssp -------CCCBSCC--CCEEEETTCCEEEECBCC----CCEEEEESSSBCCCBTTEEEETTTTEEEECSCCGGGCE
T ss_pred eECccCCCceecCC--CCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccCCCeEEeCCCcEEEEeecCcccCE
Confidence 45556677776644 467889999999999999999999999999988755544332 4468999999999875
No 358
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=98.89 E-value=2.9e-08 Score=65.48 Aligned_cols=77 Identities=12% Similarity=0.108 Sum_probs=51.6
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.+.|...+.|.|.|.|++ ++..+..... ....+.... ...|.|.++..+|+|.|+|.+.|. +.....
T Consensus 134 ~~~~~~c~~~g~p~p~i~W~~-~~~~~~~~~~--~~~~~~~~~------~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~ 204 (218)
T 4frw_A 134 LTLAASCTAEGSPAPSVTWDT-EVKGTTSSRS--FKHSRSAAV------TSEFHLVPSRSMNGQPLTCVVSHPGLLQDQR 204 (218)
T ss_dssp SEEEEEEEEEEBSCCEEEEEE-SSCCEEEEEE--EECSSSEEE------EEEEEECCCGGGTTCEEEEEEECTTCSSCEE
T ss_pred cccceeeeccCCcCceEEEEE-CCcccccCce--EecCCcEEE------EEEEEEeeCCHHhCeEEEEEEEeCCCCeEEE
Confidence 357888999999999999999 4544432221 111121111 237999999999999999999876 444555
Q ss_pred EEEEEEc
Q psy16425 82 GYLEVVV 88 (163)
Q Consensus 82 ~~l~v~~ 88 (163)
+.+.|.+
T Consensus 205 ~t~~v~V 211 (218)
T 4frw_A 205 ITHILHV 211 (218)
T ss_dssp EEEECCE
T ss_pred EEEEEEE
Confidence 5555443
No 359
>4gjt_B Poliovirus receptor-related protein 4; six-bladed -propeller, IGV-like fold, viral entry, MV-H, NEC BETA4/BETA5 groove; HET: NAG; 3.10A {Homo sapiens}
Probab=98.88 E-value=2.5e-08 Score=60.94 Aligned_cols=86 Identities=20% Similarity=0.195 Sum_probs=51.2
Q ss_pred cceeEEEeeeeccCC---CEEEEEEcCCc----eEEee-eee----EEecCCeEEEEeCC--CceEEEEEcccCCCCCeE
Q psy16425 2 AARMLIEIGEMLMAE---STVAWLRVDTQ----TILTI-QTH----VITKNHRIGVTHSE--TKAWYLHIREVRESDRGW 67 (163)
Q Consensus 2 ~~~~~~~~~~~~~~~---~~i~W~k~~~~----~~~~~-~~~----~~~~~~r~~~~~~~--~~~~~L~i~~v~~~d~G~ 67 (163)
..++.|.|...+.+. ..|.|+|.+.. .+... ... .....+|+.+.... .++++|.|.+++.+|+|.
T Consensus 15 G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~DsG~ 94 (123)
T 4gjt_B 15 GQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRNAVQADEGE 94 (123)
T ss_dssp TSEEEECCEECCCTTCCEEEEEEEECCCSSCCCEEEEECSSSCCCBCGGGTTTEECCCSSCCTTBCCEEEESCCSSSCSE
T ss_pred CCCEEEEEEEeCCccCceeEEEEEEcCCCCCcceeEEEEecCCcEeCccceeEEEEecCCCcCCEEEEEECCCChHHCEE
Confidence 357889997655443 45889995321 11111 000 01224566654433 356789999999999999
Q ss_pred EEEEEEeCCCc--eEeEEEEEE
Q psy16425 68 YMCQVNTDPMK--SQVGYLEVV 87 (163)
Q Consensus 68 Y~C~~~~~~~~--~~~~~l~v~ 87 (163)
|.|.+.+.+.. ...+.|.|.
T Consensus 95 Y~C~v~t~~~g~~~~~~~L~Vl 116 (123)
T 4gjt_B 95 YECRVSTFPAGSFQARLRLRVL 116 (123)
T ss_dssp EEEEEEESSSCEEEEEEEEEC-
T ss_pred EEEEEEECCCCeEEeEEEEEEE
Confidence 99998665333 334445443
No 360
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin mucin, signaling protein; 1.95A {Mus musculus} PDB: 3kaa_A*
Probab=98.88 E-value=1.3e-08 Score=60.40 Aligned_cols=85 Identities=16% Similarity=0.207 Sum_probs=52.3
Q ss_pred ceeEEEeeeeccCC---CEEEEEEcCCc------eEEeeee--eEEecCCeEEEEeC-CCceEEEEEcccCCCCCeEEEE
Q psy16425 3 ARMLIEIGEMLMAE---STVAWLRVDTQ------TILTIQT--HVITKNHRIGVTHS-ETKAWYLHIREVRESDRGWYMC 70 (163)
Q Consensus 3 ~~~~~~~~~~~~~~---~~i~W~k~~~~------~~~~~~~--~~~~~~~r~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C 70 (163)
.++.|.|...+.+. ..|.|++.... .+....+ ......+|+.+... ..++++|.|.+++.+|+|.|.|
T Consensus 10 ~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C 89 (109)
T 2oyp_A 10 KNAYLPCSYTLPTSGTLVPMCWGKGFCPWSQCTNELLRTDERNVTYQKSSRYQLKGDLNKGDVSLIIKNVTLDDHGTYCC 89 (109)
T ss_dssp SCEEECCBCCCCTTCCCCCEEEESSSCCSSSCSSEEEEECSSSEEEESCTTEEECSCGGGTBCCEEECSCCGGGCEEEEE
T ss_pred CCEEEEEEeECCCCCCeEEEEEEecCCCCCCceeEEEEcCCcCccccccceEEEccCccCCcEeEEEccCCChhCeEEEE
Confidence 46888888765543 34999995421 1111111 11234566665543 2345789999999999999999
Q ss_pred EEEeCC-CceEeEEEEEE
Q psy16425 71 QVNTDP-MKSQVGYLEVV 87 (163)
Q Consensus 71 ~~~~~~-~~~~~~~l~v~ 87 (163)
.+.+.+ .....+.|.|.
T Consensus 90 ~v~~~~~~~~~~~~l~V~ 107 (109)
T 2oyp_A 90 RIQFPGLMNDKKLELKLD 107 (109)
T ss_dssp EECCSSTTCCEEEEEEEE
T ss_pred EEEcCCcccceEEEEEEE
Confidence 996653 33345555554
No 361
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=98.87 E-value=9.4e-09 Score=73.46 Aligned_cols=77 Identities=10% Similarity=0.053 Sum_probs=51.4
Q ss_pred eeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEE--e----CCCceEEEEEcccCCCCCeEEEEEEEeC-C
Q psy16425 4 RMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVT--H----SETKAWYLHIREVRESDRGWYMCQVNTD-P 76 (163)
Q Consensus 4 ~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~--~----~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~ 76 (163)
.+.+.|...+.|.|.|.|++ ++..+.. ....... . ....+.+|.|.+++.+|+|.|+|.+.|. +
T Consensus 263 ~v~l~C~~~g~P~p~i~W~~-~g~~l~~--------~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G 333 (347)
T 2ifg_A 263 HWCIPFSVDGQPAPSLRWLF-NGSVLNE--------TSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFG 333 (347)
T ss_dssp SEEEEEEEEEESCCEEEEEE-TTEECCC--------CSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTE
T ss_pred eEEEEEEeeecCCCcEEEEe-CCEECCC--------CcceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCC
Confidence 57889999999999999999 5554421 1111111 1 0113458999999999999999999776 3
Q ss_pred CceEeEEEEEEcC
Q psy16425 77 MKSQVGYLEVVVP 89 (163)
Q Consensus 77 ~~~~~~~l~v~~~ 89 (163)
.....+.|.|..+
T Consensus 334 ~~~~~~~l~V~~~ 346 (347)
T 2ifg_A 334 QASASIMAAFMDN 346 (347)
T ss_dssp EEEEEEEECSCCC
T ss_pred ceeeEEEEEecCC
Confidence 3444445554443
No 362
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=98.87 E-value=1.7e-09 Score=61.82 Aligned_cols=57 Identities=19% Similarity=0.339 Sum_probs=46.6
Q ss_pred cEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceE--E--eceEEEEcchhhhHhh
Q psy16425 100 DMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQE--D--FPFFKRTKKKKKKKKK 157 (163)
Q Consensus 100 ~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~--~--~~~l~i~~v~~~~~~~ 157 (163)
...+.+|+++.|.|.+.+ |.|.+.|+++|.++........ . ...|.|.+++.+|.+.
T Consensus 5 ~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~ 65 (84)
T 2lu7_A 5 RVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGE 65 (84)
T ss_dssp CEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCCSSEEEEECSSCEEEEESSCSSTTCEE
T ss_pred EEEEecCCCEEEEEEECC-CCcEEEEEECCEEccccccEEEeecCCeEEEEecCCCCcccEE
Confidence 567889999999999966 8999999999999876665543 2 2479999999999763
No 363
>2q87_A CMRF35-H antigen; all-beta, immunoglobulin, IG-superfamily, IG-V, NKP44-like, natural killer cell IG-like receptor, inhibitory receptor; 1.70A {Homo sapiens}
Probab=98.87 E-value=6e-09 Score=62.34 Aligned_cols=88 Identities=20% Similarity=0.270 Sum_probs=54.7
Q ss_pred ceeEEEeeeeccC-CCEEEEEEcCC-c-e--EEeeeeeEEecCCeEEEEeC-CCceEEEEEcccCCCCCeEEEEEEEeCC
Q psy16425 3 ARMLIEIGEMLMA-ESTVAWLRVDT-Q-T--ILTIQTHVITKNHRIGVTHS-ETKAWYLHIREVRESDRGWYMCQVNTDP 76 (163)
Q Consensus 3 ~~~~~~~~~~~~~-~~~i~W~k~~~-~-~--~~~~~~~~~~~~~r~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~~~~~~ 76 (163)
..+.|.|...... ...+.||+... . . +...........+|+.+... ..+.++|.|.+++.+|+|.|.|.+.+..
T Consensus 12 ~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~~~ 91 (110)
T 2q87_A 12 GSLSVQCPYEKEHRTLNKYWCRPPQIFLCDKIVETKGSAGKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPW 91 (110)
T ss_dssp SCEEEEEECCGGGTTSEEEEESCCSSSSCCCSEESSSTTCSEETTEEEEEEGGGTEEEEEESSCCGGGCEEEEEEEECTT
T ss_pred CcEEEEeEecCCcCCceEEEEecCCCCCCeEEEEeCCccccccCCEEEEEcCcCCEEEEEEccCCHHHCEEEEEEEecCc
Confidence 4678888865543 36899998542 1 1 11111000013467776643 3457899999999999999999997653
Q ss_pred -C--ceEeEEEEEEcCC
Q psy16425 77 -M--KSQVGYLEVVVPP 90 (163)
Q Consensus 77 -~--~~~~~~l~v~~~p 90 (163)
. ......+.|.+.|
T Consensus 92 ~g~~~~~~~~v~v~V~p 108 (110)
T 2q87_A 92 LQDFHDPVVEVEVSVFP 108 (110)
T ss_dssp SCCBCCCSEEEEEEEC-
T ss_pred cCccCCccEEEEEEEec
Confidence 1 2345566666655
No 364
>2or7_A T-cell immunoglobulin and mucin domain- containing protein 2; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 1.50A {Mus musculus}
Probab=98.87 E-value=1e-08 Score=61.82 Aligned_cols=86 Identities=13% Similarity=0.063 Sum_probs=53.6
Q ss_pred ceeEEEeeeecc--CCCEEEEEEcCC------ceEEeeee--eEEecCCeEEEEeCC-CceEEEEEcccCCCCCeEEEEE
Q psy16425 3 ARMLIEIGEMLM--AESTVAWLRVDT------QTILTIQT--HVITKNHRIGVTHSE-TKAWYLHIREVRESDRGWYMCQ 71 (163)
Q Consensus 3 ~~~~~~~~~~~~--~~~~i~W~k~~~------~~~~~~~~--~~~~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~ 71 (163)
.++.|.|..... ....+.|++... ..+....+ ......+|+.+.... .++++|.|.+++.+|+|.|.|.
T Consensus 13 ~~v~L~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~i~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~ 92 (115)
T 2or7_A 13 HPVTLPCIYSTHLGGIVPMCWGLGECRHSYCIRSLIWTNGYTVTHQRNSRYQLKGNISEGNVSLTIENTVVGDGGPYCCV 92 (115)
T ss_dssp SCEEECCBCCHHHHCSCCEEEEESCHHHHTTTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCCGGGCEEEEEE
T ss_pred CCEEEEEEeecCCCCCEEEEEECCCCCcCCCceEEEEeCCeEcccccCccEEEecCccCCeEEEEEccCCHHHCEEEEEE
Confidence 468888876543 346899999541 22222211 122345677755322 3567999999999999999999
Q ss_pred EEeCCCceEeEEEEEEcC
Q psy16425 72 VNTDPMKSQVGYLEVVVP 89 (163)
Q Consensus 72 ~~~~~~~~~~~~l~v~~~ 89 (163)
+...+... ...+.+.+.
T Consensus 93 v~~~~~~~-~~~v~L~V~ 109 (115)
T 2or7_A 93 VEIPGAFH-FVDYMLEVK 109 (115)
T ss_dssp ECCTTSCE-EEEEEEEEE
T ss_pred EECCCcee-EEEEEEEEc
Confidence 96544332 445555443
No 365
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=98.87 E-value=1.7e-08 Score=67.05 Aligned_cols=82 Identities=23% Similarity=0.244 Sum_probs=54.0
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCC--ceE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPM--KSQ 80 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~--~~~ 80 (163)
..+.|.|...+.|.+.|.|++ ++..+... ....++...... ....|.|.+++.+|+|.|+|.+.|... .+.
T Consensus 124 ~~v~l~C~~~g~p~p~v~W~~-~g~~l~~~-----~~~~~~~~~~~~-~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~ 196 (212)
T 2yd6_A 124 RTATMLCAASGNPDPEITWFK-DFLPVDTS-----NNNGRIKQLRSE-SIGALQIEQSEESDQGKYECVATNSAGTRYSA 196 (212)
T ss_dssp SCEEEEEEEECSSCCEEEEEE-TTEEC-----------CCEEEEEET-TEEEEEECSCCGGGCEEEEEEEEETTEEEECC
T ss_pred CCEEEEEEecCCCCCeEEEEE-CCccccCc-----CCCceEEEEecC-CeEEEEEcCCCcccCEEEEEEEECCCCccccc
Confidence 357888999999999999999 55544221 112344433322 245899999999999999999987732 234
Q ss_pred eEEEEEEcCCc
Q psy16425 81 VGYLEVVVPPD 91 (163)
Q Consensus 81 ~~~l~v~~~p~ 91 (163)
.+.|.+.+.+.
T Consensus 197 ~a~l~~~~~~~ 207 (212)
T 2yd6_A 197 PANLYVRGTKH 207 (212)
T ss_dssp CEEEEEEC---
T ss_pred cccEEEEeccc
Confidence 56777776553
No 366
>2edo_A CD48 antigen; beta-sandwich, IG-fold, B-lymphocyte activation marker blast-1, BCM1 surface antigen, leukocyte antigen MEM-102, TCT.1; NMR {Homo sapiens}
Probab=98.86 E-value=7.6e-09 Score=63.11 Aligned_cols=86 Identities=17% Similarity=0.212 Sum_probs=53.9
Q ss_pred ceeEEEeee-eccCCCEEEEEEcCCceEEeeee--eE---EecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCC
Q psy16425 3 ARMLIEIGE-MLMAESTVAWLRVDTQTILTIQT--HV---ITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDP 76 (163)
Q Consensus 3 ~~~~~~~~~-~~~~~~~i~W~k~~~~~~~~~~~--~~---~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~ 76 (163)
.++.|.|.. .+.....|.||+.....+..... .. ....+|+.+.. .+.+|.|.+++.+|+|.|.|.+.+..
T Consensus 20 ~~VtL~c~~~~~~~~~~i~W~~~~~~~i~~~~~~~~~~~~~~f~~R~~l~~---~~~sL~I~nv~~~DsG~Y~c~v~~~~ 96 (121)
T 2edo_A 20 SNVTLNISESLPENYKQLTWFYTFDQKIVEWDSRKSKYFESKFKGRVRLDP---QSGALYISKVQKEDNSTYIMRVLKKT 96 (121)
T ss_dssp SCEEECCSSCCCSSEEEEEEEEETTEEEEEECSSCEEECSCTTTTTCEECT---TTCCEEESSCCGGGCSEEEEEEEETT
T ss_pred CCEEEeCCCCCCCceeEEEEEcCCCCeEEEEECcCCeEeChhcCCcEEEeC---CCceEEEeCCCHHHCeEEEEEEEcCC
Confidence 468888876 44456789999965423322111 11 12235655541 23489999999999999999996553
Q ss_pred C--ceEeEEEEEEcCCc
Q psy16425 77 M--KSQVGYLEVVVPPD 91 (163)
Q Consensus 77 ~--~~~~~~l~v~~~p~ 91 (163)
. ....+.|.|..++.
T Consensus 97 ~~~~~~~~~L~V~~~~~ 113 (121)
T 2edo_A 97 GNEQEWKIKLQVLDPVP 113 (121)
T ss_dssp TEEEECCEECEEECCSC
T ss_pred CcEEEEEEEEEEECCCC
Confidence 2 33455667765443
No 367
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Probab=98.86 E-value=5.2e-09 Score=62.48 Aligned_cols=72 Identities=17% Similarity=0.235 Sum_probs=48.1
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCC-c-e--EEeee-eeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDT-Q-T--ILTIQ-THVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD 75 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~-~-~--~~~~~-~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 75 (163)
..+.|.|...+.+.+.|.||+... . + +.... .......+|+.... ..++++|.|.+++++|+|.|.|.+.+.
T Consensus 17 ~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 93 (108)
T 1qfw_M 17 ERVTLSCKASETVDSFVSWYQQKPEQSPKLLIFGASNRFSGVPDRFTGSG-SATDFTLTISSVQAEDFADYHCGQTYN 93 (108)
T ss_dssp CCEEEEEEESSCCCSCEEEEEECTTSCCEEEECSSSCBCTTCCTTEECCB-CSSEEEEEESSCCTTCCSEEEEEECSS
T ss_pred CCEEEEeeeCCCCCcEEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEEc-CCCEEEEEECCCChhhCEEEEEEEccC
Confidence 468899988777778999999642 1 1 11111 10001245666543 335679999999999999999999653
No 368
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=98.86 E-value=1.1e-08 Score=67.89 Aligned_cols=69 Identities=22% Similarity=0.382 Sum_probs=49.1
Q ss_pred ceeEEEeee-eccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCC
Q psy16425 3 ARMLIEIGE-MLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDP 76 (163)
Q Consensus 3 ~~~~~~~~~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~ 76 (163)
..+.|.|.. .+.|.+.+.|++ ++..+............++.....+ .|.|.+++.+|+|.|+|.+.|..
T Consensus 124 ~~v~l~C~~~~g~p~~~v~W~~-~g~~~~~~~~~~~~~~~~~~~~~~~----~L~i~~~~~~d~G~Y~C~a~N~~ 193 (217)
T 2vr9_A 124 ETALLECGPPKGIPEPTLIWIK-DGVPLDDLKAMSFGASSRVRIVDGG----NLLISNVEPIDEGNYKCIAQNLV 193 (217)
T ss_dssp SCEEECCBCCCEESCCEEEEEE-TTEEECCCCCC---CCCSEEEETTT----EEEESSCCSTTCEEEEEEEEETT
T ss_pred CeEEEEEECCCCCCCCeEEEEE-CCcCCCcccccccccCCcEEecCCC----cEEEeeCCHHHCeEEEEEEEccc
Confidence 357788887 889999999999 5655532222222234555555444 89999999999999999998763
No 369
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=98.86 E-value=3e-08 Score=66.00 Aligned_cols=86 Identities=14% Similarity=0.172 Sum_probs=49.7
Q ss_pred ceeEEEeeeeccC--CCEEEEEEcCCceEEeeee-e-EEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CC
Q psy16425 3 ARMLIEIGEMLMA--ESTVAWLRVDTQTILTIQT-H-VITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PM 77 (163)
Q Consensus 3 ~~~~~~~~~~~~~--~~~i~W~k~~~~~~~~~~~-~-~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~ 77 (163)
..+.|.|...+.| .+.|.|++.+. .+..... . ........+ .......|.|.+++.+|+|.|+|.+.|. +.
T Consensus 121 ~~v~L~C~~~g~p~~~~~i~W~~~g~-~~~~~~~~~~~~~~~~~~~---~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~ 196 (213)
T 2x1w_L 121 EKLVLNCTARTELNVGIDFNWEYPSS-KHQHKKLVNRDLKTQSGSE---MKKFLSTLTIDGVTRSDQGLYTCAASSGLMT 196 (213)
T ss_dssp CCEEEEEEEEECTTBCCEEEEECSCS-SCCSEEEEEEEECCCSSCS---CEEEEEEEEESSCCGGGCEEEEEEEECSSCE
T ss_pred CCEEEEEEEECCCCCceEEEEEecCC-ccceEEEeccccccccCcc---ceeeeEEEEECCCCcccCEEEEEEEecCCCc
Confidence 4678888887644 46899999543 3211100 0 001000000 0001237999999999999999999776 45
Q ss_pred ceEeEEEEEEcCCcc
Q psy16425 78 KSQVGYLEVVVPPDI 92 (163)
Q Consensus 78 ~~~~~~l~v~~~p~~ 92 (163)
....+.|.|...|.+
T Consensus 197 ~~~~~~l~V~~~p~i 211 (213)
T 2x1w_L 197 KKNSTFVRVHEDPIE 211 (213)
T ss_dssp EEEEEEEEEEC----
T ss_pred EEEEEEEEEeccccc
Confidence 566677888776654
No 370
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=98.86 E-value=2.2e-09 Score=73.24 Aligned_cols=93 Identities=12% Similarity=0.121 Sum_probs=43.8
Q ss_pred cCCCCCeEEEEEEEeCCCceEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCC-----CCeEEEEECC--eEE
Q psy16425 60 VRESDRGWYMCQVNTDPMKSQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSP-----KPNITWRREG--GEL 132 (163)
Q Consensus 60 v~~~d~G~Y~C~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p-----~p~v~W~~~~--~~~ 132 (163)
++++|+|.|+|.+. +.......+.+..++.+...+ ....+.+|+++.|.|.+.+.| .+.+.|++++ ..+
T Consensus 11 v~~~dsg~Y~C~a~--g~~~~~~~~~~~~~~~~~~~p--~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~ 86 (254)
T 2c1o_A 11 VRPGTSVKLSCKAS--GYSFTNYWMNWLRELVMTQSP--LTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSP 86 (254)
T ss_dssp -----------------------------CCCEEEEC--SEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCC
T ss_pred ecCCccEEEEEcCc--hhhhhhhhhheeeceeEEeCC--ceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCc
Confidence 78999999999996 222222223333344444433 367889999999999999887 3889999743 221
Q ss_pred E---------ec---CCceE----EeceEEEEcchhhhHh
Q psy16425 133 I---------AQ---GNGQE----DFPFFKRTKKKKKKKK 156 (163)
Q Consensus 133 ~---------~~---~~~~~----~~~~l~i~~v~~~~~~ 156 (163)
. .. .+... ....|+|.+++.+|.+
T Consensus 87 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 126 (254)
T 2c1o_A 87 KRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLG 126 (254)
T ss_dssp EEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCS
T ss_pred eEEEEeccccCCCccceEEEecCCCEEEEEECcCCcccCE
Confidence 1 00 11111 1237999999999875
No 371
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=98.85 E-value=4.2e-09 Score=61.30 Aligned_cols=57 Identities=14% Similarity=0.299 Sum_probs=48.6
Q ss_pred CcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceEEeceEEEEcchhhhHh
Q psy16425 99 TDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQEDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 99 ~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~l~i~~v~~~~~~ 156 (163)
....+.+|+++.|.|.+.+.| |.+.|++++..+....+....++.|.|.+++.+|++
T Consensus 17 ~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~~~~L~i~~~~~~D~G 73 (95)
T 2ckn_A 17 ESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVESNRTRITGEEVEVRDSIPADSG 73 (95)
T ss_dssp CCEEECTTSCEEEECCEESSC-CEEEEEBTTBCCCCCSSEEECSSEEEESSCCGGGSE
T ss_pred ceEEEcCCCeEEEEEECCCCC-CceEEEECCEecCCCCCEEEeCCEEEECCCChHHCE
Confidence 367789999999999999987 899999999887666555556788999999999876
No 372
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=98.85 E-value=4.3e-09 Score=69.93 Aligned_cols=73 Identities=8% Similarity=-0.023 Sum_probs=45.3
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~ 81 (163)
..+.|.|...+.|.|.|.|++.++...... ....|+....++ .-..|.|.+++.+|+|.|+|.+.|.......
T Consensus 122 ~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~-----~~~~r~~~~~~g-~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~ 194 (203)
T 4fa8_A 122 SVLTVTCTVNAFPHPHVQWLMPEGVEPAPT-----AANGGVMKEKDG-SLSVAVDLSLPKPWHLPVTCVGKNDKEEAHG 194 (203)
T ss_dssp CCEEEEEEEEEESCCEEEECCC-----------------CCEECTTS-CEEEEEEEEECSSCCCCEEEEEESSSCEEEE
T ss_pred CEEEEEEEcCCCCCCEEEEEECCeeecCcc-----cccceEEEeCCC-CEEEEEECCCCHHHCEEEEEEEEcCCCEEEE
Confidence 357899999999999999998554432111 123344444333 1124566899999999999999887554443
No 373
>3r0n_A Poliovirus receptor-related protein 2; IG-domain, cell-adhesion molecule, virus entry receptor, STR genomics, PSI-biology; 1.30A {Homo sapiens} PDB: 4dfh_A 4dfi_A
Probab=98.85 E-value=2.1e-08 Score=61.46 Aligned_cols=77 Identities=18% Similarity=0.284 Sum_probs=49.2
Q ss_pred ceeEEEeeeeccCCC----EEEEEEcCC----ceEEee---eeeEEe----cCCeEEEEeCC----------CceEEEEE
Q psy16425 3 ARMLIEIGEMLMAES----TVAWLRVDT----QTILTI---QTHVIT----KNHRIGVTHSE----------TKAWYLHI 57 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~----~i~W~k~~~----~~~~~~---~~~~~~----~~~r~~~~~~~----------~~~~~L~i 57 (163)
.++.|.|...+.+.+ .|.|++... ..+... .+.... ..+|+.+.... ..+++|.|
T Consensus 18 ~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~g~~~~~~~~~~sL~I 97 (128)
T 3r0n_A 18 GTVELPCHLLPPVPGLYISLVTWQRPDAPANHQNVAAFHPKMGPSFPSPKPGSERLSFVSAKQSTGQDTEAELQDATLAL 97 (128)
T ss_dssp SCEEECCEEESCCTTCEEEEEEEECTTSCGGGCEEEEEETTTEEECCSSSSCGGGEEESSCBCCCSTTCCCBCSBCCEEE
T ss_pred CCEEEEEEeecCCCCCcEEEEEEEEeCCCCCCeeEEEEecccCcccccccccCCcEEEeccccccccccccCCCCeEEEE
Confidence 468888988776654 899999521 111111 011111 23677765553 23679999
Q ss_pred cccCCCCCeEEEEEEEeCCCce
Q psy16425 58 REVRESDRGWYMCQVNTDPMKS 79 (163)
Q Consensus 58 ~~v~~~d~G~Y~C~~~~~~~~~ 79 (163)
.+++.+|+|.|+|.+.+.+...
T Consensus 98 ~~v~~~D~G~Y~C~v~~~~~g~ 119 (128)
T 3r0n_A 98 HGLTVEDEGNYTCEFATFPKGS 119 (128)
T ss_dssp CSCCGGGCEEEEEEEEEETTEE
T ss_pred ccCCchhCeEEEEEEEeCCCCC
Confidence 9999999999999986554333
No 374
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A
Probab=98.84 E-value=9e-09 Score=61.31 Aligned_cols=72 Identities=13% Similarity=0.214 Sum_probs=48.9
Q ss_pred ceeEEEeeeeccCCCEEEEEEcC-Cc-e--EEee-eeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVD-TQ-T--ILTI-QTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD 75 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~-~~-~--~~~~-~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 75 (163)
..+.|.|...+.+.+.|.||+.. +. + +... ........+|+.... ..+.++|.|.+++++|+|.|.|.+.+.
T Consensus 17 ~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 93 (107)
T 1i8k_A 17 EKVTIRCMTSTDIDDDMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSG-TGTDFVFTIENTLSEDVGDYYCLQSFN 93 (107)
T ss_dssp CCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE-ETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred CCEEEEEEECCCCCCcEEEEEECCCCCCEEEEEecCccCCCCCCCEEEEc-cCCEEEEEECCCCHHHCEEEEEEEeeC
Confidence 46889998877778899999964 11 1 1111 111011246777654 335678999999999999999999543
No 375
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=98.83 E-value=1.9e-09 Score=63.59 Aligned_cols=66 Identities=14% Similarity=0.162 Sum_probs=50.5
Q ss_pred CCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceE----EeceEEEEcchhhhHh
Q psy16425 89 PPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQE----DFPFFKRTKKKKKKKK 156 (163)
Q Consensus 89 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~----~~~~l~i~~v~~~~~~ 156 (163)
+|.+...+ ....+.+|+++.|.|.+.+.|.|.+.|++++..+........ ....|.|.+++.+|.+
T Consensus 8 ~P~~~~~~--~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G 77 (103)
T 3qp3_A 8 APRITLRM--RSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSG 77 (103)
T ss_dssp EEEEEECC--CCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEETTEEEEEECSCCGGGCE
T ss_pred CCEEEeCC--cceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEEEECCCEEEEEEcCCCcccCE
Confidence 34444433 356788999999999999999999999999988766544332 2246999999999875
No 376
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=98.83 E-value=2.3e-08 Score=64.88 Aligned_cols=69 Identities=10% Similarity=0.064 Sum_probs=50.4
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCC-CceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDP-MKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~-~~~~~ 81 (163)
..+.|.|...+.|.+.+.|++. +..+. ... ..|.|.+++.+|+|.|+|.+.+.. .....
T Consensus 113 ~~~~l~C~~~~~p~~~v~W~~~-~~~~~---------------~~~----~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~ 172 (184)
T 2ny1_B 113 QSLTLTLESPPGSSPSVQCRSP-RGKNI---------------QGG----KTLSVSQLELQDSGTWTCTVLQNQKKVEFK 172 (184)
T ss_dssp CCEEEEEECCTTCCCEEEEECT-TSCEE---------------EES----SEEEESSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CCEEEEEEcCCCCCCEEEEEeC-CCccc---------------cCc----eEEEEecCCcCCCeEEEEEEEECCceEEEE
Confidence 3678889988889999999994 33321 111 289999999999999999997653 34455
Q ss_pred EEEEEEcCCc
Q psy16425 82 GYLEVVVPPD 91 (163)
Q Consensus 82 ~~l~v~~~p~ 91 (163)
+.|.|...|.
T Consensus 173 ~~l~V~~~p~ 182 (184)
T 2ny1_B 173 IDIVVLAFQK 182 (184)
T ss_dssp EEEEEECCCC
T ss_pred EEEEEEecCC
Confidence 6666666553
No 377
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=98.82 E-value=3.8e-08 Score=59.09 Aligned_cols=71 Identities=18% Similarity=0.393 Sum_probs=47.8
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCC-ceE---EeeeeeEEecCCeEEEEeC--CCceEEEEEcccCCCCCeEEEEEEEeC
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDT-QTI---LTIQTHVITKNHRIGVTHS--ETKAWYLHIREVRESDRGWYMCQVNTD 75 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~-~~~---~~~~~~~~~~~~r~~~~~~--~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 75 (163)
..+.|.|...+.+ +.|.||+... ... ...... ....+|+.+... ...+++|.|.+++++|+|.|.|.+.+.
T Consensus 17 ~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~l~~~~~~-~~~~~r~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~ 93 (113)
T 1h5b_A 17 TDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASG-TKENGRLKSAFDSERARYSTLHIRDAQLEDSGTYFCAAEAS 93 (113)
T ss_dssp CCEEEEEEESSCC-SEEEEEEECTTSCEEEEEEESSS-EEEETTEEEECCSSSSSEEEEEECSCCGGGCEEEEEEEECS
T ss_pred CcEEEEEEECCCC-ceEEEEEECCCCCeEEEEEECCC-CccCCceEEEEccCCCCEEEEEECCCChhhCEEEEEEEecC
Confidence 4678888877654 6899998642 211 111100 123466766544 346789999999999999999999764
No 378
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A
Probab=98.82 E-value=9.1e-09 Score=62.59 Aligned_cols=72 Identities=13% Similarity=0.232 Sum_probs=48.9
Q ss_pred ceeEEEeeeeccCCCEEEEEEcC-Cc-e--EEeee-eeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVD-TQ-T--ILTIQ-THVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD 75 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~-~~-~--~~~~~-~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 75 (163)
..+.|.|...+.+.+.|.||+.. +. + +.... .......+|+.... ..++++|.|.+++++|+|.|.|.+.+.
T Consensus 19 ~~vtL~C~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~-~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 95 (119)
T 2e27_L 19 GKVTITCKANQDIKKKIAWYQHKPGKGPRLLIYYTSTLKSGISSRFSGSG-SGRDYSFSISNLEPEDAATYYCLQYDN 95 (119)
T ss_dssp CCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE-ETTEEEEEECSCCGGGCEEEEEEECGG
T ss_pred CCEEEEEEeCCCCCceEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEc-cCCEEEEEECCCChHHCEEEEEEEccC
Confidence 46888998887778899999964 11 1 11111 11111246777654 235678999999999999999999653
No 379
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.82 E-value=1.2e-08 Score=70.27 Aligned_cols=113 Identities=13% Similarity=0.000 Sum_probs=47.2
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCC------
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDP------ 76 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~------ 76 (163)
..+.|.|...+. .+.+.|+| ++..+..... + .....+.....|.|.+++ |+|.|+|.+.+..
T Consensus 122 ~~vtL~C~~~~~-~~~~~w~k-~g~~~~~~~~-------~-~~~~~~~~~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s 189 (257)
T 1b6u_A 122 ESVTLSCSSRSS-YDMYHLSR-EGEAHERRFS-------A-GPKVNGTFQADFPLGPAT--HGGTYRCFGSFRDSPYEWS 189 (257)
T ss_dssp CEEEEEEECSSC-CSEEEEEE-TTSSCEECCB-------C-BCCSSSCCBEEEEEEECC--SCEEEEEEEECSSCTTBBC
T ss_pred CEEEEEEeCCCC-CcEEEEEE-CCcccCcccc-------c-ccccCCceeEEEEecccc--cCEEEEEEEEcCCCCcccc
Confidence 367888887765 47899999 4544321100 0 000111123489999998 9999999996531
Q ss_pred CceEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECC
Q psy16425 77 MKSQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREG 129 (163)
Q Consensus 77 ~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~ 129 (163)
..+....|.|...|.... +.........|..+.|.|.+ |.+.+.+.|...+
T Consensus 190 ~~S~pl~L~V~g~p~~~~-p~~~~~~~~~g~~~~l~~~~-~~~~~~~~~~~~~ 240 (257)
T 1b6u_A 190 NSSDPLLVSVTGNPSNSW-PSPTEPSSETGNPRHLHAAA-EQKLISEEDLNLD 240 (257)
T ss_dssp CCCCCEEECCBCCC---------------------------------------
T ss_pred cCCCCEEEEEeccCCCCC-CCCcccCccCCCeEEEEEEE-cchHHHHHHhhhh
Confidence 224456677777776552 22222334568889999876 5577789997654
No 380
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=98.82 E-value=5.9e-09 Score=68.87 Aligned_cols=73 Identities=12% Similarity=0.203 Sum_probs=48.1
Q ss_pred ceeEEEeee-eccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceE
Q psy16425 3 ARMLIEIGE-MLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQ 80 (163)
Q Consensus 3 ~~~~~~~~~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~ 80 (163)
..+.|.|.. .+.|.+.|.|++.++..... . .+.. ...+..|.|.+++.+|+|.|+|.+.|. +....
T Consensus 137 ~~v~l~C~~~~g~p~~~v~W~~~~~~~~~~-------~-~~~~----~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~ 204 (214)
T 3jz7_A 137 NDFKLKCEPKEGSLPLQFEWQKLSDSQTMP-------T-PWLA----EMTSPVISVKNASSEYSGTYSCTVQNRVGSDQC 204 (214)
T ss_dssp CCEEEEEECSBCCSSCEEEEEECSTTCCCC-------G-GGGG----GTTSSEEEECSCCGGGCEEEEEEEECSSCEEEE
T ss_pred CcEEEEecCCCCCCCCEEEEEECCCCCccC-------c-ccee----ccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEE
Confidence 357888988 89999999999953322110 0 0000 011228999999999999999999776 33444
Q ss_pred eEEEEEE
Q psy16425 81 VGYLEVV 87 (163)
Q Consensus 81 ~~~l~v~ 87 (163)
.+.|.|.
T Consensus 205 ~~~l~V~ 211 (214)
T 3jz7_A 205 MLRLDVV 211 (214)
T ss_dssp EEEECCB
T ss_pred EEEEEEe
Confidence 4455544
No 381
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=98.82 E-value=1.5e-08 Score=65.98 Aligned_cols=63 Identities=22% Similarity=0.413 Sum_probs=47.1
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCC
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDP 76 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~ 76 (163)
..+.|.|...+.|.+.+.|++ ++..+.. ....++.....+ +|.|.+++.+|+|.|+|.+.|..
T Consensus 116 ~~~~l~C~~~g~p~~~v~W~~-~~~~~~~------~~~~~~~~~~~~----~L~i~~~~~~d~G~Y~C~a~n~~ 178 (191)
T 1epf_A 116 EDAVIVCDVVSSLPPTIIWKH-KGRDVIL------KKDVRFIVLSNN----YLQIRGIKKTDEGTYRCEGRILA 178 (191)
T ss_dssp SCEEECCEEECSSCCEEEEEE-TTEEGGG------GCCTTEEECTTS----CEEETTCCGGGCEEEEEEEEEGG
T ss_pred CeEEEEEEECCCCCCEEEEEE-CCEEeec------cCCceEEEecCC----eEEECCCChhhCEEEEEEEEEec
Confidence 357888999999999999999 4544311 123445544443 79999999999999999997763
No 382
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.82 E-value=1.5e-08 Score=74.76 Aligned_cols=79 Identities=18% Similarity=0.255 Sum_probs=53.1
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.+.|.+ +.|.|.|.|++.++..+... ....|+.....+ +|.|.+++.+|+|.|+|.+.|. +.....
T Consensus 357 ~~v~L~C~~-~~p~p~i~W~~~~~~~~~~~-----~~~~~~~~~~~~----~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~ 426 (440)
T 3zyj_A 357 MAAELKCRA-STSLTSVSWITPNGTVMTHG-----AYKVRIAVLSDG----TLNFTNVTVQDTGMYTCMVSNSVGNTTAS 426 (440)
T ss_dssp SCCEECCEE-SSTTSEEEEECTTSCEEESS-----SCCSSEEECTTC----CEEESSCCSTTCEEEEEEEECSSCEEEEE
T ss_pred ceEEEEeec-CCCCCceEEEeCCCceeecc-----CCCceEEEccCC----eEEEccCChhhCEEEEEEEEcCCCcEEEE
Confidence 357778887 56899999999555443211 122455555544 7999999999999999999776 445556
Q ss_pred EEEEEEcCCc
Q psy16425 82 GYLEVVVPPD 91 (163)
Q Consensus 82 ~~l~v~~~p~ 91 (163)
+.+.|...|.
T Consensus 427 ~~~~v~~~~~ 436 (440)
T 3zyj_A 427 ATLNVTGTHH 436 (440)
T ss_dssp EEEEEC----
T ss_pred EEEEEecccc
Confidence 6666665543
No 383
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=98.81 E-value=1.4e-08 Score=66.93 Aligned_cols=76 Identities=17% Similarity=0.381 Sum_probs=50.5
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCc--eE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMK--SQ 80 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~--~~ 80 (163)
..+.|.|...+.| +.|.|++ ++..+ ....++...... .+|.|.+++.+|+|.|+|.+.|.... +.
T Consensus 126 ~~v~l~C~~~~~p-p~i~W~~-~g~~l--------~~~~~~~~~~~~---~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~ 192 (208)
T 3r4d_A 126 DSVTLTCLSNDIG-ANIQWLF-NSQSL--------QLTERMTLSQNN---SILRIDPIKREDAGEYQCEISNPVSVRRSN 192 (208)
T ss_dssp CCEEEEEECSCTT-CEEEEEE-TTEEC--------CCCSSEEEETTT---TEEEESSCCGGGCEEEEEEEECTTCCEECC
T ss_pred CCEEEEEECCCCC-CceEEEE-CCEeC--------CCCCCeEEcCCC---CEEEEeccCHHhCeEEEEEEecCCCcccCC
Confidence 3577888888766 7999999 55544 223445444332 28999999999999999999877433 34
Q ss_pred eEEEEEEcCCc
Q psy16425 81 VGYLEVVVPPD 91 (163)
Q Consensus 81 ~~~l~v~~~p~ 91 (163)
.+.|.+..+|.
T Consensus 193 ~~~l~v~~~~~ 203 (208)
T 3r4d_A 193 SIKLDIIFDPH 203 (208)
T ss_dssp CEEECCC----
T ss_pred ceeeeEEeCCc
Confidence 45555555443
No 384
>1hkf_A NKP44, NK cell activating receptor; natural cytotoxicity receptor, immunoglobulin domain; 2.2A {Homo sapiens} SCOP: b.1.1.1
Probab=98.81 E-value=7e-08 Score=58.91 Aligned_cols=85 Identities=12% Similarity=0.237 Sum_probs=53.6
Q ss_pred ceeEEEeeeecc--CCCEEEEEEcCC-c---e-EEeeeeeEEecCCeEEEEe-CCCceEEEEEcccCCCCCeEEEEEEEe
Q psy16425 3 ARMLIEIGEMLM--AESTVAWLRVDT-Q---T-ILTIQTHVITKNHRIGVTH-SETKAWYLHIREVRESDRGWYMCQVNT 74 (163)
Q Consensus 3 ~~~~~~~~~~~~--~~~~i~W~k~~~-~---~-~~~~~~~~~~~~~r~~~~~-~~~~~~~L~i~~v~~~d~G~Y~C~~~~ 74 (163)
..+.|.|..... ....+.||+... . . +...........+|+.+.. ...+.++|.|.+++++|+|.|.|.+..
T Consensus 26 ~svtL~C~~s~~~~~~~~v~W~rq~~~~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~l~~~Dsg~Y~C~v~~ 105 (122)
T 1hkf_A 26 QTLTVRCQYPPTGSLYEKKGWCKEASALVCIRLVTSSKPRTMAWTSRFTIWDDPDAGFFTVTMTDLREEDSGHYWCRIYR 105 (122)
T ss_dssp CCEEEEEECCCCTTCCCEEEEEEEEETTEEEEEEEECSTTCCBCSTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred CCEEEEeEccCCCCcccEEEEEcCCCCCCceEEEEeCCeEeEeecCcEEEEEcCcCCEEEEEEeCCCHHHCEEEEEEEEc
Confidence 467888876543 236899999631 1 1 1111111123457887753 345788999999999999999999965
Q ss_pred CC--CceEeEEEEEE
Q psy16425 75 DP--MKSQVGYLEVV 87 (163)
Q Consensus 75 ~~--~~~~~~~l~v~ 87 (163)
.+ .......|.+.
T Consensus 106 ~~~~~~~~~~~l~L~ 120 (122)
T 1hkf_A 106 PSDNSVSKSVRFYLV 120 (122)
T ss_dssp TTTCCEEEEEEEEEE
T ss_pred CCCCcccccEEEEEE
Confidence 43 33444445444
No 385
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=98.81 E-value=1.1e-08 Score=76.15 Aligned_cols=74 Identities=19% Similarity=0.261 Sum_probs=49.9
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.+.|.+.+.|.|.|.|++.+ ..+... ....|+.....+ +|.|.+++.+|+|.|+|.+.+. +.....
T Consensus 401 ~~v~l~C~~~g~P~p~i~W~~~~-~~~~~~-----~~~~~~~~~~~~----~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~ 470 (477)
T 2id5_A 401 HTVQFVCRADGDPPPAILWLSPR-KHLVSA-----KSNGRLTVFPDG----TLEVRYAQVQDNGTYLCIAANAGGNDSMP 470 (477)
T ss_dssp CCEEECCCEEEESCCEEEEECTT-SCBC------------CEECTTS----CEEESSCCSTTCEEEEEEEEETTEEEEEE
T ss_pred CeEEEEEeccccCCCEEEEEECC-cccccc-----CCCceEEeCCCC----EEEEeeCChHHCEEEEEEEEeCCCcEEEE
Confidence 46788899999999999999954 333211 123444444443 7999999999999999999776 333444
Q ss_pred EEEEE
Q psy16425 82 GYLEV 86 (163)
Q Consensus 82 ~~l~v 86 (163)
+.+.|
T Consensus 471 ~~l~V 475 (477)
T 2id5_A 471 AHLHV 475 (477)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 45544
No 386
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=98.81 E-value=6.8e-09 Score=60.66 Aligned_cols=57 Identities=12% Similarity=0.246 Sum_probs=46.8
Q ss_pred cEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceE-----EeceEEEEcchhhhHh
Q psy16425 100 DMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQE-----DFPFFKRTKKKKKKKK 156 (163)
Q Consensus 100 ~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~-----~~~~l~i~~v~~~~~~ 156 (163)
...+.+|+++.|.|.+.|.|.|.+.|++++..+........ ....|.|.+++.+|.+
T Consensus 14 ~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G 75 (99)
T 1g1c_A 14 SQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSA 75 (99)
T ss_dssp CEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCE
T ss_pred ceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCE
Confidence 56788999999999999999999999999998765544332 2237999999999876
No 387
>3u6r_L Antibody 1:7 (light chain); IG-like domain, neutralizing single chain FV, immune system; 2.67A {Homo sapiens}
Probab=98.80 E-value=1.4e-08 Score=63.76 Aligned_cols=72 Identities=17% Similarity=0.249 Sum_probs=48.3
Q ss_pred ceeEEEeeeeccCCCEEEEEEcC-Cc---eEEee-eeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVD-TQ---TILTI-QTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD 75 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~-~~---~~~~~-~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 75 (163)
..+.|.|.....+...+.||+.. +. .+... ........+|+.... ...+++|.|.+++.+|+|.|.|.+.+.
T Consensus 16 ~~vtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~-~~~~~sL~I~~l~~~DsG~Y~C~~~~~ 92 (143)
T 3u6r_L 16 ERATLSCRASQSVNKYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSG-SGTDFTLTISNLEPEDFAVYYCQQRSD 92 (143)
T ss_dssp CCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ETTEEEEEECSCCGGGCEEEEEEECSS
T ss_pred CCEEEEEEECCCCceeeEEEEECCCCCCEEEEEeCCccCCCccCcEeEEc-cCCEEEEEEccCcccCCEEEEEEEecC
Confidence 46788888776667789999963 11 11111 111112346777663 346789999999999999999999543
No 388
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=98.80 E-value=2.7e-09 Score=61.85 Aligned_cols=67 Identities=19% Similarity=0.268 Sum_probs=48.9
Q ss_pred CCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECC--eEEEecCCceE--EeceEEEEcchhhhHhh
Q psy16425 89 PPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREG--GELIAQGNGQE--DFPFFKRTKKKKKKKKK 157 (163)
Q Consensus 89 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~--~~~~~~~~~~~--~~~~l~i~~v~~~~~~~ 157 (163)
+|.+...+ ....+.+|+.+.|.|.+.|.|.|.+.|++++ ..+........ ....|.|.++..+|++.
T Consensus 2 ~P~i~~~~--~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~ 72 (93)
T 1wit_A 2 KPKILTAS--RKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVDAKSSTTSIFFPSAKRADSGN 72 (93)
T ss_dssp CCEECCCC--CEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTTSEEEEETTEEEEECTTBCGGGCEE
T ss_pred CCeEEcCC--CceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCcEEEEecCCEEEEEECCCChhcCEE
Confidence 45554322 4677899999999999999999999999999 66533211111 23679999999998763
No 389
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=98.80 E-value=5.3e-09 Score=80.65 Aligned_cols=101 Identities=21% Similarity=0.199 Sum_probs=49.7
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCC-C----
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDP-M---- 77 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~-~---- 77 (163)
..+.|.|...+ |.+.|.|+++ +..+.. ....++ +... ..|.|.+++.+|+|.|.|.+.+.+ .
T Consensus 549 ~~~~L~C~~~s-p~a~v~W~~~-~~~l~~------~~~~~~-~~~~----~~LlI~~v~~~DsG~Y~C~A~e~~~~~~~~ 615 (663)
T 1olz_A 549 GTAELKCSQKS-NLARVFWKFQ-NGVLKA------ESPKYG-LMGR----KNLLIFNLSEGDSGVYQCLSEERVKNKTVF 615 (663)
T ss_dssp SCEEECCCCSC-TTCEEEEEES-SSBCCC------CSSSBC-CTTT----TCEEECSCCGGGCEEEEEEEEEECSSSEEE
T ss_pred CcEEEEccCCC-CCCcEEEEEC-Ceeccc------cCcceE-EecC----CeEEEEecCcccCeEEEEEEEECccCCCce
Confidence 46788898888 9999999994 443311 111111 1111 269999999999999999997662 1
Q ss_pred -ceEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEecc
Q psy16425 78 -KSQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASG 117 (163)
Q Consensus 78 -~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~ 117 (163)
......|+|.++|.+...|.. .....+|+.+.++|.+..
T Consensus 616 ~~~~~~~l~V~v~P~~~~~p~~-~~~~~~g~~~~~~~~~~~ 655 (663)
T 1olz_A 616 QVVAKHVLEVKVVPKPVVAPTL-SVVQTEGSRIATKVLVAS 655 (663)
T ss_dssp EEEEEEEEEEEC-----------------------------
T ss_pred EEEEEEEEEEEeCCccCCCCCC-hhhhhcCCceEEEeeccc
Confidence 134567888999988887654 467889999999999854
No 390
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=98.80 E-value=7.4e-09 Score=62.51 Aligned_cols=81 Identities=15% Similarity=0.165 Sum_probs=46.1
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceE--EEEEcccCCCCCeEEEEEEEeCCCc--
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAW--YLHIREVRESDRGWYMCQVNTDPMK-- 78 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~--~L~i~~v~~~d~G~Y~C~~~~~~~~-- 78 (163)
..+.|.|...+.|.|.|.|++ ++..+..... ....+......+ ... .|.+.+++.+|+|.|+|.+.|....
T Consensus 25 ~~v~L~C~~~g~P~p~v~W~k-~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~i~~~~v~~~D~G~Y~C~a~N~~G~~~ 99 (117)
T 2v9t_A 25 EPATLNCKAEGRPTPTIEWYK-GGERVETDKD---DPRSHRMLLPSG-SLFFLRIVHGRKSRPDEGVYVCVARNYLGEAV 99 (117)
T ss_dssp CCEEECCEEEEESCCEEEEEE-TTEECCCTTT---CSSCSEEECTTS-CEEESSCCCBTTBCSSCEEEEEEEEETTEEEE
T ss_pred CcEEEEEECCccCCCeEEEEE-CCEeccccCC---CCcceeEEecCC-cEEEEEEEeCCCCcCcCEEEEEEEEeCccceE
Confidence 357889999999999999999 5544321100 000111111221 111 1223367899999999999877332
Q ss_pred eEeEEEEEEc
Q psy16425 79 SQVGYLEVVV 88 (163)
Q Consensus 79 ~~~~~l~v~~ 88 (163)
+..+.+.+..
T Consensus 100 s~~~~l~~~~ 109 (117)
T 2v9t_A 100 SHDASLEVAA 109 (117)
T ss_dssp CCCEEEEEC-
T ss_pred eeeEEEEhhh
Confidence 3344555544
No 391
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=98.80 E-value=6.4e-08 Score=62.84 Aligned_cols=81 Identities=21% Similarity=0.292 Sum_probs=51.9
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.|.|...+.|.+.+.|++.+........ ......++...... ....|.|.+++.+|+|.|+|.+.|. +.....
T Consensus 110 ~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 186 (192)
T 2va4_A 110 GQVTLVCDAEGEPIPEITWKRAVDGFTFTEG--DKSLDGRIEVKGQH-GSSSLHIKDVKLSDSGRYDCEAASRIGGHQKS 186 (192)
T ss_dssp SEEEEEEEEEEESCCEEEEEETTTTEEECTT--CBCTTSCEEEEEET-TEEEEEEESCCGGGCEEEEEEEECSSCEEEEE
T ss_pred CeEEEEEEecCCCCCcEEEEeCCCCceeecc--ccccCCcEEEeecc-CceEEEEecCCcccCEEEEEEEEecCCceEEE
Confidence 4678889999999999999995322221100 01123444443322 3458999999999999999999776 333344
Q ss_pred EEEEE
Q psy16425 82 GYLEV 86 (163)
Q Consensus 82 ~~l~v 86 (163)
+.|.|
T Consensus 187 ~~l~V 191 (192)
T 2va4_A 187 MYLDI 191 (192)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 44443
No 392
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=98.79 E-value=2.3e-08 Score=65.36 Aligned_cols=71 Identities=14% Similarity=0.212 Sum_probs=48.9
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.|.|...+.|.+.|.|++ ++..+. ... ..... +..|.|.+++.+|+|.|+|.+.|. +.....
T Consensus 129 ~~~~l~C~~~g~p~p~v~W~~-~~~~~~--------~~~--~~~~~---~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 194 (201)
T 3s97_C 129 QNVTLECFALGNPVPDIRWRK-VLEPMP--------STA--EISTS---GAVLKIFNIQLEDEGIYECEAENIRGKDKHQ 194 (201)
T ss_dssp CCEEEEEEEEEESCCEEEEEE-TTBCCC--------TTC--EEETT---TTEEEECSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CcEEEEEEccCCCCCceEEEe-CCCcCC--------Cce--eecCC---CCEEEEccCChhhCEEEEEEEEecCCceeee
Confidence 357888988899999999999 444331 111 11111 128999999999999999999776 344445
Q ss_pred EEEEEE
Q psy16425 82 GYLEVV 87 (163)
Q Consensus 82 ~~l~v~ 87 (163)
+.|.|.
T Consensus 195 ~~l~V~ 200 (201)
T 3s97_C 195 ARIYVQ 200 (201)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 555553
No 393
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=98.79 E-value=2.5e-08 Score=66.17 Aligned_cols=75 Identities=20% Similarity=0.353 Sum_probs=52.2
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCCce-E-
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPMKS-Q- 80 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~-~- 80 (163)
..+.|.|...+.|.+.|.|++ ++..+. ....++... .+ .|.|.+++.+|+|.|+|.+.|..... .
T Consensus 126 ~~v~l~C~~~g~p~p~i~W~~-~~~~~~-------~~~~~~~~~-~~----~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~ 192 (212)
T 2yd1_A 126 HTVLMTCKAIGNPTPNIYWIK-NQTKVD-------MSNPRYSLK-DG----FLQIENSREEDQGKYECVAENSMGTEHSK 192 (212)
T ss_dssp CCEEECCEEECSSCCEEEEEE-TTEECC-------TTSTTEEEE-TT----EEEECSCCGGGCEEEEEEEEETTEEEECC
T ss_pred CeEEEEEEeccCCCCeEEEEE-CCeEcc-------cCCCeEEcc-CC----eEEEccCChhhCEEEEEEeecCCCceeEE
Confidence 357888999999999999999 554432 112334332 22 89999999999999999998764332 2
Q ss_pred eEEEEEEcCC
Q psy16425 81 VGYLEVVVPP 90 (163)
Q Consensus 81 ~~~l~v~~~p 90 (163)
.+.|.|...+
T Consensus 193 ~~~l~V~~~~ 202 (212)
T 2yd1_A 193 ATNLYVKVRR 202 (212)
T ss_dssp CEEEEEEC--
T ss_pred EEEEEEEecc
Confidence 3577777543
No 394
>1i3g_L Antibody FV fragment; antibiotic; 2.44A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy6_A
Probab=98.79 E-value=1.4e-08 Score=60.90 Aligned_cols=72 Identities=21% Similarity=0.271 Sum_probs=48.8
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCC-c---eEEeee-eeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDT-Q---TILTIQ-THVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD 75 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~-~---~~~~~~-~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 75 (163)
..+.|.|...+.+.+.|.||+... . .+.... .......+|+.... ..+.++|.|.+++++|+|.|.|.+.+.
T Consensus 20 ~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~-~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 96 (111)
T 1i3g_L 20 DRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSG-SGTDFTLTISNVQSEDLADYFCQQYSS 96 (111)
T ss_dssp CCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ETTEEEEEESSCCGGGCSEEEEEECSS
T ss_pred CCEEEEEEeCCCCCCCEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEc-CCCEEEEEECCCCHHHCEEEEEEEecC
Confidence 468889988777778899999642 1 111111 11111246777654 335678999999999999999999543
No 395
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=98.79 E-value=5.9e-09 Score=61.05 Aligned_cols=66 Identities=20% Similarity=0.386 Sum_probs=50.1
Q ss_pred CCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceE---Ee--ceEEEEcchhhhHh
Q psy16425 89 PPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQE---DF--PFFKRTKKKKKKKK 156 (163)
Q Consensus 89 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~---~~--~~l~i~~v~~~~~~ 156 (163)
+|.+...+ ....+.+|+++.|.|.+.|.|.|.+.|++++..+........ .+ ..|.|.+++.+|.+
T Consensus 5 ~P~~~~~p--~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G 75 (100)
T 2kdg_A 5 PPRFIQVP--ENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAG 75 (100)
T ss_dssp EEECCCCC--CCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCE
T ss_pred CCeEEeCC--CCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCE
Confidence 34444433 356788999999999999999999999999988765543321 11 37999999999875
No 396
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=98.79 E-value=1.5e-08 Score=58.85 Aligned_cols=57 Identities=14% Similarity=0.139 Sum_probs=46.1
Q ss_pred CcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceE--Ee--ceEEEEcchhhhHh
Q psy16425 99 TDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQE--DF--PFFKRTKKKKKKKK 156 (163)
Q Consensus 99 ~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~--~~--~~l~i~~v~~~~~~ 156 (163)
....+.+|+++.|.|.+.+ |+|.+.|+++|.++....+... ++ ..|.|.+++.+|.+
T Consensus 13 ~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G 73 (93)
T 1waa_A 13 YGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTG 73 (93)
T ss_dssp CCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCBTTEEEEEETTEEEEEECSCCGGGCE
T ss_pred cceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCCCCEEEEEECCEEEEEECCCChhhCE
Confidence 3678899999999999976 5588999999999876655443 22 37999999999976
No 397
>3rrq_A Protein PD-1, programmed cell death protein 1; programmed death-1, costimulatory, immune system; 2.10A {Homo sapiens}
Probab=98.78 E-value=8.8e-08 Score=59.01 Aligned_cols=89 Identities=17% Similarity=0.232 Sum_probs=55.4
Q ss_pred ceeEEEeeeeccC-CCEEEEEEcC-C-ce--EEee-ee-eEEecCCeEEEEeCC-CceEEEEEcccCCCCCeEEEEEEEe
Q psy16425 3 ARMLIEIGEMLMA-ESTVAWLRVD-T-QT--ILTI-QT-HVITKNHRIGVTHSE-TKAWYLHIREVRESDRGWYMCQVNT 74 (163)
Q Consensus 3 ~~~~~~~~~~~~~-~~~i~W~k~~-~-~~--~~~~-~~-~~~~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~~~~ 74 (163)
..+.|.|...... ...+.||+.. + .. +... .. ......+|+....+. .++++|.|.+++.+|+|.|.|.+.+
T Consensus 17 ~~vtL~C~~s~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~ 96 (129)
T 3rrq_A 17 DNATFTCSFSNTSESFVLNWYRMSPSNQTDKLAAFPEDRSQPGQDCRFRVTQLPNGRDFHMSVVRARRNDSGTYLCGAIS 96 (129)
T ss_dssp SCEEEEEECCCCC-CEEEEEEEEESTTSCEEEEEETC--------CCEEEEECTTSSEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCEEEEeEecCCCCCcEEEEeEeCCCCCccEEEEEcCCccCCCcCCcEEEEEcCCCCEEEEEECCCChhHCEEEEEEEEe
Confidence 4678888876654 5679999853 1 11 1111 11 111224688877533 4678999999999999999999966
Q ss_pred CC-Cc----eEeEEEEEEcCCc
Q psy16425 75 DP-MK----SQVGYLEVVVPPD 91 (163)
Q Consensus 75 ~~-~~----~~~~~l~v~~~p~ 91 (163)
.. .. +..+.|.|...+.
T Consensus 97 ~~~~~~~~~s~~~~L~V~~~~~ 118 (129)
T 3rrq_A 97 LAPKLQIKESLRAELRVTERRA 118 (129)
T ss_dssp CGGGCEEEECCCEEEEEECCCC
T ss_pred cCCCceeeEeceEEEEEecCcc
Confidence 42 22 3456777776543
No 398
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=98.78 E-value=5.7e-08 Score=63.28 Aligned_cols=75 Identities=12% Similarity=0.239 Sum_probs=52.2
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCC-CCCeEEEEEEEeC-CCceE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRE-SDRGWYMCQVNTD-PMKSQ 80 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~-~d~G~Y~C~~~~~-~~~~~ 80 (163)
..+.|.|...+.|.+.+.|++ ++..+ ....++...... ....|.|.++.. +|+|.|+|.+.|. +....
T Consensus 119 ~~~~l~C~~~~~p~p~v~W~~-~~~~~--------~~~~~~~~~~~~-~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~ 188 (197)
T 3lcy_A 119 STLRLHVMYIGRPVPAMTWFH-GQKLL--------QNSENITIENTE-HYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDA 188 (197)
T ss_dssp SCEEEEEEEEEESCCEEEEEE-TTEEC--------CCCSSEEEEECS-SEEEEEESSCCHHHHCEEEEEEEECSSCEEEE
T ss_pred CeEEEEEEEeeeeCCeeEEeE-CCEEC--------CCCCceEEEEcC-CEEEEEEccccchhhCceEEEEEEcCcCceEE
Confidence 357888998999999999999 55544 223344443332 235899999995 8999999999776 44444
Q ss_pred eEEEEEE
Q psy16425 81 VGYLEVV 87 (163)
Q Consensus 81 ~~~l~v~ 87 (163)
.+.|.|.
T Consensus 189 ~~~l~V~ 195 (197)
T 3lcy_A 189 ILDVEIQ 195 (197)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 4555554
No 399
>1ncn_A T lymphocyte activation antigen CD86; IG V, beta strands, immune system; 2.70A {Homo sapiens} SCOP: b.1.1.1 PDB: 1i85_A
Probab=98.78 E-value=1.5e-07 Score=56.09 Aligned_cols=71 Identities=13% Similarity=0.255 Sum_probs=45.7
Q ss_pred cceeEEEeeeeccCCC-----EEEEEEcCCceEEee-eeeE------EecCCeEEEEeCCCceEEEEEcccCCCCCeEEE
Q psy16425 2 AARMLIEIGEMLMAES-----TVAWLRVDTQTILTI-QTHV------ITKNHRIGVTHSETKAWYLHIREVRESDRGWYM 69 (163)
Q Consensus 2 ~~~~~~~~~~~~~~~~-----~i~W~k~~~~~~~~~-~~~~------~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 69 (163)
..++.|.|...+.|.+ .|.|++.+...+... .+.. ....+|+.+... +++|.|.+++.+|+|.|.
T Consensus 9 G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~---~~sL~I~~v~~~D~G~Y~ 85 (110)
T 1ncn_A 9 NETADLPCQFANSQNQSLSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSFDSD---SWTLRLHNLQIKDKGLYQ 85 (110)
T ss_dssp TSCEEEECCCCCTTCCCGGGEEEEEEETTCCEEEEEETTEECCSSBCTTTTTSEEEETT---TTEEEECSCCGGGCEEEE
T ss_pred CCCEEEEeEeCCCCcCCCccEEEEEEeCCCccEEEEECCcccccccCcccCCcEEEECC---CEEEEEcCCChHHCEEEE
Confidence 3468899987654433 499999643323211 1111 122456665532 359999999999999999
Q ss_pred EEEEeC
Q psy16425 70 CQVNTD 75 (163)
Q Consensus 70 C~~~~~ 75 (163)
|.+.+.
T Consensus 86 C~v~~~ 91 (110)
T 1ncn_A 86 CIIHHK 91 (110)
T ss_dssp EEEEEE
T ss_pred EEEEcC
Confidence 999655
No 400
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.78 E-value=2e-09 Score=63.06 Aligned_cols=67 Identities=22% Similarity=0.406 Sum_probs=50.2
Q ss_pred cCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceE-EeceEEEEcchhhhHh
Q psy16425 88 VPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQE-DFPFFKRTKKKKKKKK 156 (163)
Q Consensus 88 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~-~~~~l~i~~v~~~~~~ 156 (163)
.+|.+...+ ....+.+|+++.|.|.+.|.|.|.+.|++++..+........ ....|.|.+++.+|.+
T Consensus 10 ~~P~~~~~~--~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~L~i~~v~~~D~G 77 (99)
T 2yr3_A 10 VAPSFSSVL--KDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARSTCEAGVAELHIQDALPEDHG 77 (99)
T ss_dssp EEEEEEECC--CCEEECTTCCEEEECEEEEESCCCCEEEESSSBCSSCCCEEETTEEEEEECSCCTTCCB
T ss_pred cCCceeecC--CCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECcccceEeeCCeEEEEECCCChhhCE
Confidence 345554433 356788999999999999999999999999987654432222 3357999999998875
No 401
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.77 E-value=1e-08 Score=60.12 Aligned_cols=66 Identities=24% Similarity=0.463 Sum_probs=50.0
Q ss_pred CCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecC-Cce-EEeceEEEEcchhhhHh
Q psy16425 89 PPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQG-NGQ-EDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 89 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~-~~~-~~~~~l~i~~v~~~~~~ 156 (163)
+|.+...+ ....+.+|+++.|.|.+.+.|.|.+.|++++..+.... ... ..++.|.|.+++.+|.+
T Consensus 8 ~P~i~~~p--~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G 75 (100)
T 2edj_A 8 PPIILQGP--ANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQEQGTLQIKNLRISDTG 75 (100)
T ss_dssp SCEEEECC--CCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCEECTTCCEEEESCCTTTCC
T ss_pred CCEEEeCc--CCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEEEcCCCEEEEccCCcccCE
Confidence 44444433 35678899999999999999999999999998875322 222 24568999999999875
No 402
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=98.77 E-value=3.3e-08 Score=67.76 Aligned_cols=104 Identities=15% Similarity=0.137 Sum_probs=52.0
Q ss_pred ceeEEEeee---eccCCCEEEEEEcCCceEEeeeeeE---------E----ecCCeEEEEeCC-CceEEEEEcccCCCCC
Q psy16425 3 ARMLIEIGE---MLMAESTVAWLRVDTQTILTIQTHV---------I----TKNHRIGVTHSE-TKAWYLHIREVRESDR 65 (163)
Q Consensus 3 ~~~~~~~~~---~~~~~~~i~W~k~~~~~~~~~~~~~---------~----~~~~r~~~~~~~-~~~~~L~i~~v~~~d~ 65 (163)
..+.|.|.. .+.|.+.|.|++.++.......... . ....|+.+.... ..+.+|.|.+++.+|+
T Consensus 134 ~~v~L~C~~~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~ 213 (268)
T 3mj6_A 134 DTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQ 213 (268)
T ss_dssp CCEEECCBCEESSSSCCCEEEEEEECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGC
T ss_pred CcEEEEEEecCCCCCCccceEEEecCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhC
Confidence 357788887 6779999999995443211000000 0 112233332211 2345899999999999
Q ss_pred eEEEEEEEeC-CCceEeEEEEEEc-CCcccccCCCCcEEEeCCCc
Q psy16425 66 GWYMCQVNTD-PMKSQVGYLEVVV-PPDILDYPTSTDMVIREGSN 108 (163)
Q Consensus 66 G~Y~C~~~~~-~~~~~~~~l~v~~-~p~~~~~~~~~~~~~~~g~~ 108 (163)
|.|+|.+.+. +.....+.|.|.. +|.+...+. ...+.+|+.
T Consensus 214 G~Y~C~a~n~~g~~~~~~~l~V~~~~p~~~~~p~--~~~~~~~q~ 256 (268)
T 3mj6_A 214 GIYTCSIYVGKLESRKTIVLHVVQDEFQRTISPT--PPTDKGQQG 256 (268)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEECC--------------------
T ss_pred eEEEEEEEcCCceEEEEEEEEEEcCCCeeeeCCC--CCCCCccee
Confidence 9999999775 3334455666643 444444332 333444444
No 403
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.76 E-value=6.4e-08 Score=62.64 Aligned_cols=77 Identities=19% Similarity=0.345 Sum_probs=51.7
Q ss_pred ceeEEEeeeeccC-CCEEEEEEc---CCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccC-CCCCeEEEEEEEeC-C
Q psy16425 3 ARMLIEIGEMLMA-ESTVAWLRV---DTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVR-ESDRGWYMCQVNTD-P 76 (163)
Q Consensus 3 ~~~~~~~~~~~~~-~~~i~W~k~---~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~-~~d~G~Y~C~~~~~-~ 76 (163)
..+.|.|...+.| .+.|.|++. +...+.. ...+++.+...+ ....|.|.+++ .+|+|.|+|.+.|. +
T Consensus 99 ~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~------~~~~~~~~~~~~-~~~~L~i~~v~~~~d~G~Y~C~a~N~~g 171 (184)
T 3b5h_A 99 ETAMLVCKSESVPPVTDWAWYKITDSEDKALMN------GSESRFFVSSSQ-GRSELHIENLNMEADPGQYRCNGTSSKG 171 (184)
T ss_dssp SCEEEEEECCCSSCCCEEEEEECCSSSCEECCT------TGGGTEEEEEET-TEEEEEECSCCTTTSSEEEEEEEEETTE
T ss_pred CcEEEEEEECCCCCCCeEEEEEcCCCCCEEeec------CCCCEEEEEecC-CeeEEEEeeccccccCceEEEEEEeCCC
Confidence 3678889999999 799999993 3222210 112455555432 34589999999 99999999999776 3
Q ss_pred CceEeEEEEE
Q psy16425 77 MKSQVGYLEV 86 (163)
Q Consensus 77 ~~~~~~~l~v 86 (163)
.....+.|.|
T Consensus 172 ~~~~~~~l~V 181 (184)
T 3b5h_A 172 SDQAIITLRV 181 (184)
T ss_dssp EEEEEEEEEE
T ss_pred cceEEEEEEE
Confidence 3334444444
No 404
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.76 E-value=1.8e-08 Score=60.88 Aligned_cols=67 Identities=25% Similarity=0.442 Sum_probs=51.4
Q ss_pred CCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCC-ce-EEeceEEEEcchhhhHhh
Q psy16425 89 PPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGN-GQ-EDFPFFKRTKKKKKKKKK 157 (163)
Q Consensus 89 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~-~~-~~~~~l~i~~v~~~~~~~ 157 (163)
+|.+...+ ....+.+|+++.|.|.+.|.|.|.+.|++++..+..... .. ..++.|.|.+++.+|.+.
T Consensus 8 pP~i~~~p--~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~ 76 (118)
T 2eo9_A 8 PPVIRQGP--VNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENGVLQIRYAKLGDTGR 76 (118)
T ss_dssp SCCCSBCC--CCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEEEEETTEEEEESCCGGGCCC
T ss_pred CCEEEcCC--CCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEEEccCCEEEEccCCcCCCEE
Confidence 45555433 357789999999999999999999999999987753222 22 356789999999999763
No 405
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=98.76 E-value=6.8e-08 Score=59.88 Aligned_cols=84 Identities=19% Similarity=0.277 Sum_probs=52.0
Q ss_pred ceeEEEeeeeccCCCEEEEEEcC-CceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCC----
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVD-TQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPM---- 77 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~---- 77 (163)
..+.|.|...+. +.|.||+.. +...... ....+|+.....+ ..++|.|.+++.+|+|.|.|.+.+...
T Consensus 33 ~~v~L~C~~~~~--~~v~W~r~~~g~~~~~l----~~~~~r~~~~~~~-~~~~L~I~~~~~~DsG~Y~C~a~n~~g~~~~ 105 (133)
T 3khq_A 33 SMVKFHCYTNHS--GALTWFRKRGSQQPQEL----VSEEGRIVQTQNG-SVYTLTIQNIQYEDNGIYFCKQKCDSANHNV 105 (133)
T ss_dssp CCEEEEEEESSS--SCEEEEEECTTSCCEEC----CCTTTTEEEEEET-TEEEEEECSCCGGGCEEEEEEESSCC-----
T ss_pred CeEEEEEEeCCC--CEEEEEEeCCCCCCEEE----EEeCCCEEEEcCC-CEEEEEECCCChHHCEEEEEEEEeCCCCcce
Confidence 467888888766 889999963 2221110 1235677765543 467899999999999999999965421
Q ss_pred -ceEeEEEEEEcCCccc
Q psy16425 78 -KSQVGYLEVVVPPDIL 93 (163)
Q Consensus 78 -~~~~~~l~v~~~p~~~ 93 (163)
....+.|.|...|.+.
T Consensus 106 ~~g~gt~L~V~~~p~~~ 122 (133)
T 3khq_A 106 TDSCGTELLVLGFSTLD 122 (133)
T ss_dssp --CCCEEEEEC------
T ss_pred eECCCEEEEEEecccch
Confidence 2344567776655443
No 406
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=98.75 E-value=1.4e-09 Score=66.27 Aligned_cols=77 Identities=16% Similarity=0.139 Sum_probs=50.0
Q ss_pred ceeEEEeeeeccCCCE-EEEEEcCCceEEeeeeeEEecCCeEEEE--eCCC-ceEEEEEcccCCCCC-eEEEEEEEeC-C
Q psy16425 3 ARMLIEIGEMLMAEST-VAWLRVDTQTILTIQTHVITKNHRIGVT--HSET-KAWYLHIREVRESDR-GWYMCQVNTD-P 76 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~-i~W~k~~~~~~~~~~~~~~~~~~r~~~~--~~~~-~~~~L~i~~v~~~d~-G~Y~C~~~~~-~ 76 (163)
.++.|.|...+.|.|. |.|++ ++..+... ...|+.+. .... ....|.|.+++.+|+ |.|+|.+.|. +
T Consensus 29 ~~v~l~C~~~g~P~p~~i~W~~-~~~~l~~~------~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~~G~Y~C~a~N~~G 101 (122)
T 2cry_A 29 EKGQIKCFIRSTPPPDRIAWSW-KENVLESG------TSGRYTVETISTEEGVISTLTISNIVRADFQTIYNCTAWNSFG 101 (122)
T ss_dssp SCCCCCEEECCSSCCSEEEEES-SSCEECSE------EETTEEEEEEEETTEEEEEEECTTCCHHHHHSCEEEEEECSSC
T ss_pred CCEEEEEEEeecCCCcEeEEEE-CCEEccCC------CCCCEEEEEecCCCceEEEEEEcCCChhhCCceEEEEEECCCC
Confidence 3678889999999987 99999 45444211 12344432 1111 134899999999999 9999999776 3
Q ss_pred CceEeEEEEE
Q psy16425 77 MKSQVGYLEV 86 (163)
Q Consensus 77 ~~~~~~~l~v 86 (163)
.....+.|.|
T Consensus 102 ~~~~~~~l~V 111 (122)
T 2cry_A 102 SDTEIIRLKE 111 (122)
T ss_dssp EEEEEECCCC
T ss_pred eEEEEEEEEE
Confidence 3333333333
No 407
>2d9c_A Signal-regulatory protein beta-1; beta-sandwich, SIRP-beta-1, CD172B antigen, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.75 E-value=4.2e-08 Score=60.88 Aligned_cols=85 Identities=14% Similarity=0.211 Sum_probs=51.6
Q ss_pred ceeEEEeeeecc-CCCEEEEEEcCCce---EEeeeeeEEecCCeEEEEeC----CCceEEEEEcccCCCCCeEEEEEEEe
Q psy16425 3 ARMLIEIGEMLM-AESTVAWLRVDTQT---ILTIQTHVITKNHRIGVTHS----ETKAWYLHIREVRESDRGWYMCQVNT 74 (163)
Q Consensus 3 ~~~~~~~~~~~~-~~~~i~W~k~~~~~---~~~~~~~~~~~~~r~~~~~~----~~~~~~L~i~~v~~~d~G~Y~C~~~~ 74 (163)
..+.|.|...+. +.+.|.||+..+.. +..... ....|+..... ...+++|.|.+++.+|+|.|.|.+.+
T Consensus 24 ~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~i~~~~~---~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 100 (136)
T 2d9c_A 24 ESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKE---GHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFR 100 (136)
T ss_dssp SCEEECCEESCCCSCCCCEEEETTTSSCEEEEESSS---CCCSSBCCSSCSSSSSCCBCCEEESSCCTTTCEEEEEEEEE
T ss_pred CCEEEEEEEcCCCCCceEEEEeecCCCeEEEEEcCC---CcccceeeeeeeccCCCCEEEEEECCCCHHHCEEEEEEEEe
Confidence 468888887655 56789999965321 111110 00124332211 12357899999999999999999965
Q ss_pred CCC---ce----EeEEEEEEcCC
Q psy16425 75 DPM---KS----QVGYLEVVVPP 90 (163)
Q Consensus 75 ~~~---~~----~~~~l~v~~~p 90 (163)
... .. ..+.|.|...|
T Consensus 101 ~~~~~~~~~~~g~~t~L~V~~~~ 123 (136)
T 2d9c_A 101 KGSPDDVEFKSGAGTELSVRAKP 123 (136)
T ss_dssp CCSSSCEEEEECCCEEEEEECCC
T ss_pred CCCCcccceeeCCCeEEEEEeCC
Confidence 432 11 34567777655
No 408
>3qjh_A 5C.C7 alpha chain; immunoglobulin domain, T cell receptor, immune system; 1.90A {Mus musculus} PDB: 3qiu_C* 3qiw_C* 3qjf_A 3qib_C 2ial_A 2iam_C 2ian_D 4e41_D 4e42_A 3rug_E* 3axl_A
Probab=98.75 E-value=1.7e-07 Score=62.25 Aligned_cols=112 Identities=16% Similarity=0.244 Sum_probs=64.5
Q ss_pred ceeEEEeeeeccCCCEEEEEEcC-Cce---EEeeeeeEEecCCeEEEEe-CCCceEEEEEcccCCCCCeEEEEEEEeCC-
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVD-TQT---ILTIQTHVITKNHRIGVTH-SETKAWYLHIREVRESDRGWYMCQVNTDP- 76 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~-~~~---~~~~~~~~~~~~~r~~~~~-~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~- 76 (163)
..+.|.|..... ...+.||+.. +.. +....... ...+|+.... .....++|+|.+++++|+|.|.|.+....
T Consensus 19 ~svtL~C~~s~~-~~~v~Wyrq~~g~~~~~l~~~~~~~-~~~~Rfs~~~~~~~~~~sL~I~~l~~~DsG~Y~Cav~~~~~ 96 (205)
T 3qjh_A 19 TGSALRCNFTTT-MRAVQWFRKNSRGSLINLFYLASGT-KENGRLKSAFDSKERYSTLHIRDAQLEDSGTYFCAAEASNT 96 (205)
T ss_dssp CCEEEEEECSSC-EEEEEEEEEC-CCCEEEEEEESSEE-EEETTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETTT
T ss_pred CCEEEEEEEECC-cceEEEEEECCCCCcEEEEEECCCC-ccCCCEEEEEcCCCCEEEEEEeccccccCeEEEEEEEcCCC
Confidence 457888877665 5689999963 221 11111111 3356777664 33567899999999999999999996321
Q ss_pred ---CceEeEEEEEEcCCcccccCCCCcEE--EeCCCcEEEEeEeccCCC
Q psy16425 77 ---MKSQVGYLEVVVPPDILDYPTSTDMV--IREGSNVTLKCAASGSPK 120 (163)
Q Consensus 77 ---~~~~~~~l~v~~~p~~~~~~~~~~~~--~~~g~~~~l~C~~~~~p~ 120 (163)
.......|.|..... . +.+.+. ......++|.|.+.+..+
T Consensus 97 ~~~~fG~GT~L~V~~~~~--~--~~p~V~~l~~~~~~~tl~Cl~~~f~P 141 (205)
T 3qjh_A 97 NKVVFGTGTRLQVLPNIQ--N--PDPAVYQLRDSKSSDKSVCLFTDFDS 141 (205)
T ss_dssp CCEEEBCCEEEEEECCCS--S--CCCEEEEEEBCC--CCEEEEEESCCT
T ss_pred CccccCCCEEEEEeCccc--C--CCCEEEEecccCCCcEEEEEEEcccc
Confidence 112234566653210 0 001111 111234789999988654
No 409
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=98.75 E-value=1.8e-08 Score=58.74 Aligned_cols=57 Identities=21% Similarity=0.417 Sum_probs=46.3
Q ss_pred cEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceE--E--eceEEEEcchhhhHh
Q psy16425 100 DMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQE--D--FPFFKRTKKKKKKKK 156 (163)
Q Consensus 100 ~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~--~--~~~l~i~~v~~~~~~ 156 (163)
...+.+|+++.|.|.+.+.|.|.+.|++++..+....+... . ...|.|.+++.+|.+
T Consensus 15 ~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 75 (99)
T 3puc_A 15 DTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSEDKGGFFLEIHKTDTSDSG 75 (99)
T ss_dssp CEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCE
T ss_pred cEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEeCCEEEEEECCCCcccCE
Confidence 56788999999999999999999999999988765544432 1 126999999999875
No 410
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=98.75 E-value=1.4e-07 Score=55.62 Aligned_cols=69 Identities=17% Similarity=0.328 Sum_probs=46.6
Q ss_pred eeEEEeeeec-cCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCC-ceEEEEEcccCCCCCeEEEEEEEeC
Q psy16425 4 RMLIEIGEML-MAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSET-KAWYLHIREVRESDRGWYMCQVNTD 75 (163)
Q Consensus 4 ~~~~~~~~~~-~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~L~i~~v~~~d~G~Y~C~~~~~ 75 (163)
.+.|.|.+.+ .+.|.|+|.|.++..-..... ....+......++ ..+.|.|.+|.+.|+|.|+|.+++.
T Consensus 31 ~~~LeCpv~yc~~rPnVtWcK~~~~~c~~L~~---~~q~~~~w~e~~n~s~fiL~f~~V~~sDsG~YrCsAn~~ 101 (122)
T 1xau_A 31 LFKIECPVKYCVHRPNVTWCKHNGTIWVPLEV---GPQLYTSWEENRSVPVFVLHFKPIHLSDNGSYSCSTNFN 101 (122)
T ss_dssp CEEEEEEEECSSSCCCEEEEEECSSSEEECCC---BTTEEEEEECSSSSCEEEEEETTCCGGGCEEEEEEEEET
T ss_pred eEEEEeEecCCCCCCcEEEEecCCeecccccc---ceeeecceeccCCceeEEEEEeeEEEcCCccEEEEeeCC
Confidence 4678888855 689999999976543322110 1122333333332 4568999999999999999999764
No 411
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=98.75 E-value=1.4e-08 Score=75.15 Aligned_cols=77 Identities=23% Similarity=0.317 Sum_probs=50.8
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQV 81 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~ 81 (163)
..+.+.|.+. |.|.|.|++.++..+... ....|+.....+ +|.|.+++.+|+|.|+|.+.|. +.....
T Consensus 368 ~~~~l~C~~~--p~p~i~W~~~~~~~~~~~-----~~~~~~~~~~~g----~L~i~~v~~~D~G~Y~C~a~N~~G~~~~~ 436 (452)
T 3zyi_A 368 RMAELKCRTP--PMSSVKWLLPNGTVLSHA-----SRHPRISVLNDG----TLNFSHVLLSDTGVYTCMVTNVAGNSNAS 436 (452)
T ss_dssp SCCEECCBCC--TTSEEEEECTTSCEECSS-----CCCSSCEECTTS----CEECSSCCTTCCEEEEEEEECSSCEEEEE
T ss_pred CEEEEEEeCC--CCCcEEEEeCCCcEeccC-----CCCCCEEECCCC----eEEEeecCHHHCEEEEEEEEcCCCcEEEE
Confidence 3577788776 999999999655443211 122355555444 7999999999999999999776 444455
Q ss_pred EEEEEEcCC
Q psy16425 82 GYLEVVVPP 90 (163)
Q Consensus 82 ~~l~v~~~p 90 (163)
+.+.|...+
T Consensus 437 ~~l~v~~~~ 445 (452)
T 3zyi_A 437 AYLNVSTAG 445 (452)
T ss_dssp EEEEC----
T ss_pred EEEEEEccc
Confidence 556555443
No 412
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=98.74 E-value=1.5e-08 Score=59.17 Aligned_cols=57 Identities=19% Similarity=0.350 Sum_probs=45.5
Q ss_pred cEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceE---Ee--ceEEEEcchhhhHh
Q psy16425 100 DMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQE---DF--PFFKRTKKKKKKKK 156 (163)
Q Consensus 100 ~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~---~~--~~l~i~~v~~~~~~ 156 (163)
...+.+|+++.|.|.+.+.|.|.+.|++++..+........ .+ ..|.|.+++.+|.+
T Consensus 14 ~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G 75 (99)
T 1u2h_A 14 DQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAG 75 (99)
T ss_dssp CEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCE
T ss_pred ceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCE
Confidence 55788999999999999999999999999988765533221 11 26999999999875
No 413
>2nms_A CMRF35-like-molecule 1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, inhibitory receptor, myelo-monocytic cells; 2.60A {Homo sapiens}
Probab=98.74 E-value=1.4e-07 Score=57.77 Aligned_cols=88 Identities=9% Similarity=0.167 Sum_probs=53.9
Q ss_pred ceeEEEeeeeccC-CCEEEEEEcCC--c--eEEe-eeeeEEecCCeEEEEeC-CCceEEEEEcccCCCCCeEEEEEEEeC
Q psy16425 3 ARMLIEIGEMLMA-ESTVAWLRVDT--Q--TILT-IQTHVITKNHRIGVTHS-ETKAWYLHIREVRESDRGWYMCQVNTD 75 (163)
Q Consensus 3 ~~~~~~~~~~~~~-~~~i~W~k~~~--~--~~~~-~~~~~~~~~~r~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 75 (163)
..+.|.|...... ...+.||+... . .+.. .+.......+|+.+..+ ..+.++|.|.+++.+|+|.|.|.+...
T Consensus 18 ~svtL~C~~s~~~~~~~~~W~rq~~~~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~l~~~Dsg~Y~C~~~~~ 97 (124)
T 2nms_A 18 GSLTVQCVYRSGWETYLKWWCRGAIWRDCKILVKTSGSEQEVKRDRVSIKDNQKNRTFTVTMEDLMKTDADTYWCGIEKT 97 (124)
T ss_dssp CCEEEEEEECTTCTTSEEEEEESSSSTTCEEEEECCSSSCCEEETTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCEEEEeEEeCCcccccEEEEeCCCCCCceEEEEcCCcccceeCCCEEEEEcCcCCEEEEEEeCCCHHHCEEEEEEEEcC
Confidence 4678888765443 23699999642 1 1111 11111123467777654 356789999999999999999999654
Q ss_pred C-CceEeEEEEEEcCC
Q psy16425 76 P-MKSQVGYLEVVVPP 90 (163)
Q Consensus 76 ~-~~~~~~~l~v~~~p 90 (163)
+ .....+.|.|..+|
T Consensus 98 ~~~~~~~v~L~V~~~~ 113 (124)
T 2nms_A 98 GNDLGVTVQVTIDPAP 113 (124)
T ss_dssp TEEEEEEEEEEEECCC
T ss_pred CCCccEEEEEEEeCCC
Confidence 3 22333455555444
No 414
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=98.74 E-value=8.2e-08 Score=63.93 Aligned_cols=84 Identities=14% Similarity=0.101 Sum_probs=52.1
Q ss_pred ceeEEEeee-eccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCce-EEEEEcccCCCCCeEEEEEEEeC-CCce
Q psy16425 3 ARMLIEIGE-MLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKA-WYLHIREVRESDRGWYMCQVNTD-PMKS 79 (163)
Q Consensus 3 ~~~~~~~~~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~L~i~~v~~~d~G~Y~C~~~~~-~~~~ 79 (163)
..+.|.|.. .+.|.+.|.|++.++..+... ..........+. ..|.|.+++.+|+|.|+|.+.+. +...
T Consensus 126 ~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~ 197 (222)
T 4i0k_A 126 NMVTITCSSYQGYPEAEVFWKDGQGVPLTGN--------VTTSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQD 197 (222)
T ss_dssp SEEEEEEEEEEEBSCCEEEEECTTSCBCCSE--------EEEEEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEE
T ss_pred ceEEEEEecccccCCCeEEEEcCCCccCCCC--------cceeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCc
Confidence 367888888 788999999998555443211 111111112222 24789999999999999999776 5556
Q ss_pred EeEEEEEEcCCcccc
Q psy16425 80 QVGYLEVVVPPDILD 94 (163)
Q Consensus 80 ~~~~l~v~~~p~~~~ 94 (163)
..+.|.|..+|....
T Consensus 198 ~~~~l~V~~~p~~~~ 212 (222)
T 4i0k_A 198 AHGSVTITGQPLTFP 212 (222)
T ss_dssp EEEEEECCC------
T ss_pred eEEEEEEeCCccccC
Confidence 666777776664433
No 415
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.74 E-value=2.5e-09 Score=64.54 Aligned_cols=72 Identities=18% Similarity=0.206 Sum_probs=53.3
Q ss_pred EEEEEcCC-cccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceE-----EeceEEEEcchhhhHh
Q psy16425 83 YLEVVVPP-DILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQE-----DFPFFKRTKKKKKKKK 156 (163)
Q Consensus 83 ~l~v~~~p-~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~-----~~~~l~i~~v~~~~~~ 156 (163)
.|.|..+| .+...+ ....+.+|+++.|.|.+.+.|.|.+.|++++..+....+... ....|.|.+++.+|.+
T Consensus 6 ~l~V~~~p~~~~~~~--~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 83 (115)
T 2cr6_A 6 SGLVQGRRVHIIEDL--EDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHANELNEIDAQPGGYHVLTLRQLALKDSG 83 (115)
T ss_dssp CCCCCSSCCEEEECC--CEEEEETTSCEECCCEEESTTCCSCEEEESSCEECCSSSCCBCCBTTTBCCBEECSCCTTTCE
T ss_pred EEEEcCCCCeEeccC--ccEEEeCCCcEEEEEEEcCCCCCccEEEECCEECCCCCcEEEEEcCCCEEEEEEcCCChhhCE
Confidence 34454444 233322 467889999999999999999999999999998866644332 2247999999999876
No 416
>2frg_P TREM-like transcript-1; immunoglobulin-like, beta-sandwich, cell surface receptor, triggering receptor, platelet receptor, ITIM, immune system; 1.19A {Homo sapiens}
Probab=98.73 E-value=2.4e-07 Score=55.08 Aligned_cols=88 Identities=15% Similarity=0.187 Sum_probs=52.5
Q ss_pred ceeEEEeeeecc-CCCEEEEEEcCCce-E---EeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCC
Q psy16425 3 ARMLIEIGEMLM-AESTVAWLRVDTQT-I---LTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPM 77 (163)
Q Consensus 3 ~~~~~~~~~~~~-~~~~i~W~k~~~~~-~---~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~ 77 (163)
..+.|.|..... ....+.||+..... . ...........+|+.+.....+.++|+|.+++++|+|.|.|.+.....
T Consensus 13 ~svtl~C~~s~~~~~~~~~Wyrq~~g~~~~li~~~~~~~~~~~~R~s~~~~~~~~~~L~I~~l~~~Dsg~Y~C~~~~~~~ 92 (106)
T 2frg_P 13 SSILVQCHYRLQDVKAQKVWCRFLPEGCQPLVSSAVDRRAPAGRRTFLTDLGGGLLQVEMVTLQEEDAGEYGCMVDGARG 92 (106)
T ss_dssp CCEEEEEECCGGGTTSEEEEEEEETTEEEEEEECCBTCEEEETTTEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTE
T ss_pred CcEEEEeEecCCcccCcEEEEECCCCCCcEEEEeCCcEeeecCCCEEEEcCCCCEEEEEEccCCHHHCEEEEEEeecCCC
Confidence 467888876432 23457899864211 1 111111223457887654445678999999999999999999965432
Q ss_pred ceEeEEEEEEcCC
Q psy16425 78 KSQVGYLEVVVPP 90 (163)
Q Consensus 78 ~~~~~~l~v~~~p 90 (163)
.-....+.+.+.|
T Consensus 93 ~d~~~~v~L~V~p 105 (106)
T 2frg_P 93 PQILHRVSLNILP 105 (106)
T ss_dssp EEEEEEEEEEECC
T ss_pred CCEeEEEEEEEeC
Confidence 2222344444433
No 417
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=98.73 E-value=4.7e-08 Score=56.88 Aligned_cols=58 Identities=16% Similarity=0.142 Sum_probs=47.1
Q ss_pred CcEEEeCCCcEEEEeEeccC-CCCeEEEEECCeEEEecCCceE--Eec--eEEEEcchhhhHh
Q psy16425 99 TDMVIREGSNVTLKCAASGS-PKPNITWRREGGELIAQGNGQE--DFP--FFKRTKKKKKKKK 156 (163)
Q Consensus 99 ~~~~~~~g~~~~l~C~~~~~-p~p~v~W~~~~~~~~~~~~~~~--~~~--~l~i~~v~~~~~~ 156 (163)
....+.+|+++.|.|.+.+. |.|.+.|++++..+........ .++ .|.|.+++.+|.+
T Consensus 9 ~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G 71 (97)
T 2bk8_A 9 MHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDG 71 (97)
T ss_dssp CCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCE
T ss_pred cCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCCCCEEEEEcCCeEEEEEecCChhhCe
Confidence 36778899999999999997 9999999999988765544432 333 8999999999875
No 418
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=98.73 E-value=4.5e-08 Score=63.11 Aligned_cols=71 Identities=14% Similarity=0.180 Sum_probs=50.1
Q ss_pred ceeEEEeee-eccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCC--Cce
Q psy16425 3 ARMLIEIGE-MLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDP--MKS 79 (163)
Q Consensus 3 ~~~~~~~~~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~--~~~ 79 (163)
..+.|.|.. .+.|.+.+.|++ ++..+.. . ..+..|.|.+++.+|+|.|+|.+.+.. ..+
T Consensus 101 ~~~~l~C~~~~~~p~~~~~W~~-~g~~~~~--------~---------~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s 162 (176)
T 1f2q_A 101 QPLFLRCHGWRNWDVYKVIYYK-DGEALKY--------W---------YENHNISITNATVEDSGTYYCTGKVWQLDYES 162 (176)
T ss_dssp SCEEEEEEEGGGCCEEEEEEEE-TTEECCS--------C---------CCSSEEEESSCCGGGCEEEEEEEEETTEEEEC
T ss_pred CCEEEEEEecCCCCceEEEEEE-CCEEEee--------e---------cCCCeEEECCCCcccCEEEEEEEEeCCcceEe
Confidence 357788887 466778999999 5554310 0 112389999999999999999998752 234
Q ss_pred EeEEEEEEcCCc
Q psy16425 80 QVGYLEVVVPPD 91 (163)
Q Consensus 80 ~~~~l~v~~~p~ 91 (163)
..+.|.|..+|.
T Consensus 163 ~~~~l~V~~~p~ 174 (176)
T 1f2q_A 163 EPLNITVIKAPR 174 (176)
T ss_dssp CCEEEEEECSCC
T ss_pred cCEEEEEecCCC
Confidence 456777777664
No 419
>1j05_L T84.66 antibody, anti-CEA MAB T84.66, light chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1qfw_L* 1qnz_L 3iy3_A 3iy4_A
Probab=98.73 E-value=2.4e-08 Score=59.79 Aligned_cols=72 Identities=17% Similarity=0.176 Sum_probs=47.6
Q ss_pred ceeEEEeeeeccC----CCEEEEEEcC-Cce---EEeee-eeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEE
Q psy16425 3 ARMLIEIGEMLMA----ESTVAWLRVD-TQT---ILTIQ-THVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVN 73 (163)
Q Consensus 3 ~~~~~~~~~~~~~----~~~i~W~k~~-~~~---~~~~~-~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~ 73 (163)
..+.|.|...+.+ .+.|.||+.. +.. +.... .......+|+.... ..++++|.|.+++++|+|.|.|.+.
T Consensus 17 ~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~-~~~~~~L~I~~v~~~DsG~Y~C~~~ 95 (111)
T 1j05_L 17 QRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTG-SRTDFTLIIDPVEADDVATYYCQQT 95 (111)
T ss_dssp SCEEEEEEESSCCEETTEECEEEEEECTTSCEEEEEETTTEECTTSCTTEEEEE-ETTEEEEEESSCCGGGCEEEEEEEC
T ss_pred CCEEEEeecCCCcccCCCceEEEEEeCCCCCCEEEEEecCcCCCCCCCcEEEEc-cCCEEEEEECCCCcccCEEEEEEEe
Confidence 4688889877665 5789999963 221 11111 11011246777654 3356789999999999999999995
Q ss_pred eC
Q psy16425 74 TD 75 (163)
Q Consensus 74 ~~ 75 (163)
+.
T Consensus 96 ~~ 97 (111)
T 1j05_L 96 NE 97 (111)
T ss_dssp SS
T ss_pred cC
Confidence 43
No 420
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=98.72 E-value=2.8e-08 Score=57.21 Aligned_cols=52 Identities=21% Similarity=0.388 Sum_probs=43.3
Q ss_pred cEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceEEeceEEEEcchhhhHh
Q psy16425 100 DMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQEDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 100 ~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~l~i~~v~~~~~~ 156 (163)
...+.+|+++.|.|.+.|.|.|.+.|++++..+... ....|.|.+++.+|.+
T Consensus 12 ~~~v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~-----~~~~L~i~~v~~~d~G 63 (91)
T 3bfo_A 12 SQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHE-----TKKLYMVPYVDLEHQG 63 (91)
T ss_dssp CEEECTTSCEEEECEEECSSCCEEEEEETTEECTTC-----CSSEEEESSCCGGGCE
T ss_pred ccEecCCCcEEEEEEeccCCCCEEEEEcCCeeCCcC-----CCCeEEECCCCHHhCE
Confidence 456889999999999999999999999999876433 2357899999988875
No 421
>2yc1_B Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_B 3lh2_L 3h3p_L 3lhp_L
Probab=98.72 E-value=3.6e-08 Score=62.13 Aligned_cols=85 Identities=16% Similarity=0.168 Sum_probs=53.4
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCC-c---eEEeee-eeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCC
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDT-Q---TILTIQ-THVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPM 77 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~-~---~~~~~~-~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~ 77 (163)
..+.|.|.....+.+.|.||+... . .+.... ........|+.... ...+++|.|.+++++|+|.|.|.+.+...
T Consensus 32 ~sVtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~-~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~ 110 (146)
T 2yc1_B 32 ERATLSCRASQSVRSYLAWYQQKPGQAPRLLFSDASNRATGIPARFTGSG-SGTDFTLTISSLEPEDFAIYYCQQYRYSP 110 (146)
T ss_dssp SCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ETTEEEEEESSCCGGGCSEEEEEECSSSS
T ss_pred CCEEEEEEECCCCCCEEEEEEECCCCCCEEEEEeCCccCCCcCCCeEEec-CCCEEEEEECCCCHHHCEEEEEEEecCCC
Confidence 468888988777778899999642 1 111111 11111246777654 23567899999999999999999965422
Q ss_pred --ceEeEEEEEEc
Q psy16425 78 --KSQVGYLEVVV 88 (163)
Q Consensus 78 --~~~~~~l~v~~ 88 (163)
......|.|..
T Consensus 111 ~~fg~GT~L~V~~ 123 (146)
T 2yc1_B 111 RTFGQGTKVEIKR 123 (146)
T ss_dssp CEECCCEEEEEC-
T ss_pred CeECCCEEEEEeC
Confidence 12234555543
No 422
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.72 E-value=1e-08 Score=61.68 Aligned_cols=57 Identities=16% Similarity=0.131 Sum_probs=46.4
Q ss_pred CcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecC----------CceE-Ee---ceEEEEcchhhhHhh
Q psy16425 99 TDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQG----------NGQE-DF---PFFKRTKKKKKKKKK 157 (163)
Q Consensus 99 ~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~----------~~~~-~~---~~l~i~~v~~~~~~~ 157 (163)
....+.+|+++.|.|.+.+ .|.+.|++||.++..+. +... .+ ..|+|.+++.+|++.
T Consensus 16 ~d~~v~eG~~a~f~C~vs~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~g~~~~L~I~~v~~~D~G~ 86 (112)
T 2e6q_A 16 EDVQVYDGEDAVFSLDLST--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVKHQDSGA 86 (112)
T ss_dssp CCEEEETTCEEEEEEEESS--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECCBTTEEEEEEESCCSTTCSE
T ss_pred CCeEEcCCCcEEEEEEECC--CCeEEEEECCEECccCcccccccccccEEEEEeCCcEEEEEECCCCHHHCcc
Confidence 4678999999999999987 77899999999987665 3333 12 379999999999874
No 423
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=98.72 E-value=5.1e-09 Score=65.09 Aligned_cols=73 Identities=14% Similarity=0.172 Sum_probs=45.9
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeee-EEecCCeEEEEe--CCCceEEEEEcccCCCCCeEEEEEEEeC
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTH-VITKNHRIGVTH--SETKAWYLHIREVRESDRGWYMCQVNTD 75 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~-~~~~~~r~~~~~--~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 75 (163)
..+.|.|...+.|.+.|.|++.+.......... ......++.... ....+.+|.|.+++.+|+|.|+|.+.|.
T Consensus 37 ~~v~L~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 112 (137)
T 3qr2_A 37 GSVELHCEAVGSPVPEIQWWFEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISIDTLVEEDTGTYECRASND 112 (137)
T ss_dssp SCEEEEEEEECSSCCEEEEEEEESSTTCCCEECCTTHHHHTEEEEEEESSSEEEEEEECSCCGGGCEEEEEEEECC
T ss_pred CCEEEEEEEeeecCCeEEEEECCCCccccceeecccCcccceEEecccccccceEEEECCCCcccCEEEEEEEEec
Confidence 468899999999999999999443221100000 000011222221 1123458999999999999999999776
No 424
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A
Probab=98.72 E-value=9.7e-08 Score=57.17 Aligned_cols=68 Identities=25% Similarity=0.332 Sum_probs=46.6
Q ss_pred ceeEEEeeeecc--CCCEEEEEEcC-CceEEeeeeeEEecCCeEEEEe-CCCceEEEEEcccCCCCCeEEEEEEEe
Q psy16425 3 ARMLIEIGEMLM--AESTVAWLRVD-TQTILTIQTHVITKNHRIGVTH-SETKAWYLHIREVRESDRGWYMCQVNT 74 (163)
Q Consensus 3 ~~~~~~~~~~~~--~~~~i~W~k~~-~~~~~~~~~~~~~~~~r~~~~~-~~~~~~~L~i~~v~~~d~G~Y~C~~~~ 74 (163)
..+.|.|...+. +.+.|.||+.. +.... ......+|+.... ....+++|.|.+++++|+|.|.|.+.+
T Consensus 16 ~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 87 (111)
T 2ywz_A 16 ESLTIKCVLKDHSCGLSSTTWYRTQLGSTNE----KTISIGGRYDETVDKGSKSFSLRISDLRVEDSGTYKCQADY 87 (111)
T ss_dssp CCEEEEEEEESCSSCCCEEEEEEEETTCCCC----EECCSBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCEEEEeEECCCCCCCCEEEEEEeCCCCCce----EeeEeCCCEEEEEeCCCCEEEEEECCCChhcCEEEEEEEEc
Confidence 468888887655 57899999953 21110 0112345666543 234578999999999999999999976
No 425
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=98.71 E-value=4.2e-08 Score=57.98 Aligned_cols=54 Identities=15% Similarity=0.219 Sum_probs=42.7
Q ss_pred eCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCce---------EEeceEEEEcchhhhHhh
Q psy16425 104 REGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQ---------EDFPFFKRTKKKKKKKKK 157 (163)
Q Consensus 104 ~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~---------~~~~~l~i~~v~~~~~~~ 157 (163)
..+..+.|.|.+.|.|.|.+.|++++..+....... ...+.|.|.+++.+|.+.
T Consensus 14 ~~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 76 (103)
T 1wwb_X 14 TSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGD 76 (103)
T ss_dssp CCCCEEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEE
T ss_pred eECcEEEEEEEEEEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEE
Confidence 357789999999999999999999999886654321 123459999999999763
No 426
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=98.71 E-value=6.1e-08 Score=58.52 Aligned_cols=67 Identities=21% Similarity=0.317 Sum_probs=51.4
Q ss_pred cCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEec-CCceE-E-e---ceEEEEcchhhhHh
Q psy16425 88 VPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQ-GNGQE-D-F---PFFKRTKKKKKKKK 156 (163)
Q Consensus 88 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~-~~~~~-~-~---~~l~i~~v~~~~~~ 156 (163)
.+|.+...+ ....+.+|+++.|.|.+.|.|.|.+.|++++..+... .+... . + ..|.|.+++.+|.+
T Consensus 14 ~~p~f~~~p--~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 86 (116)
T 2kkq_A 14 RAPMFIYKP--QSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAG 86 (116)
T ss_dssp BCCCBSSCC--CCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCE
T ss_pred CCCeEEeCC--CcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCE
Confidence 456666644 3678999999999999999999999999999887643 22222 1 1 27999999999875
No 427
>4ffy_L DENV1-E111 single chain variable fragment (light; viral envelope proteins, structural genomics, antibody epito flavivirus, niaid; 2.50A {Mus musculus}
Probab=98.71 E-value=4.2e-08 Score=60.18 Aligned_cols=72 Identities=18% Similarity=0.267 Sum_probs=47.8
Q ss_pred ceeEEEeeeeccC----CCEEEEEEcCC--ce--EEee-eeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEE
Q psy16425 3 ARMLIEIGEMLMA----ESTVAWLRVDT--QT--ILTI-QTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVN 73 (163)
Q Consensus 3 ~~~~~~~~~~~~~----~~~i~W~k~~~--~~--~~~~-~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~ 73 (163)
..+.|.|.....+ .+.|.||+... .+ +... .........|+.... ...+++|.|.+++++|+|.|.|.+.
T Consensus 17 ~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~-~~~~~sL~I~~v~~~DsG~Y~C~~~ 95 (126)
T 4ffy_L 17 QRATISCRASESVDHYGNSFIYWYQQKPGQPPKLLIYLASNLESGVPARFSGSG-SETDFTLTIDSVETDDAATYYCQQN 95 (126)
T ss_dssp SCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE-ETTEEEEEESSCCGGGCEEEEEEEC
T ss_pred CCEEEEEecCCCcccCCCceEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEec-CCCEEEEEECCCCHHHCEEEEEEEe
Confidence 4688889887766 67899999631 11 1111 111112245776653 2357899999999999999999996
Q ss_pred eC
Q psy16425 74 TD 75 (163)
Q Consensus 74 ~~ 75 (163)
+.
T Consensus 96 ~~ 97 (126)
T 4ffy_L 96 NE 97 (126)
T ss_dssp SS
T ss_pred cC
Confidence 53
No 428
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=98.71 E-value=6e-08 Score=63.89 Aligned_cols=81 Identities=19% Similarity=0.246 Sum_probs=49.8
Q ss_pred ceeEEEee-eeccCCCEEEEEEcCCc-eEEeeeeeE-EecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCc
Q psy16425 3 ARMLIEIG-EMLMAESTVAWLRVDTQ-TILTIQTHV-ITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMK 78 (163)
Q Consensus 3 ~~~~~~~~-~~~~~~~~i~W~k~~~~-~~~~~~~~~-~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~ 78 (163)
..+.|.|. ..+.|.+.|.|++ ++. .+....... .....++.... ....|.|.+++.+|+|.|+|.+.|. +..
T Consensus 120 ~~~~l~C~~~~~~p~~~i~W~~-~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 195 (212)
T 1f97_A 120 NRAVLTCSEHDGSPPSEYSWFK-DGISMLTADAKKTRAFMNSSFTIDP---KSGDLIFDPVTAFDSGEYYCQAQNGYGTA 195 (212)
T ss_dssp SCEEEEEECSCCBSCCEEEEEE-TTEESBC-----CBSCSSSCEEECT---TTCCEEESSCCGGGCEEEEEEEECSSSCC
T ss_pred CeEEEEEEcccCcCCCEEEEEe-CCcccccccccccccccCceeEecC---CCceEEEEecChhhCcEEEEEEccccCCc
Confidence 35788888 7889999999999 554 442211100 00112232221 1237999999999999999999876 333
Q ss_pred --eEeEEEEEE
Q psy16425 79 --SQVGYLEVV 87 (163)
Q Consensus 79 --~~~~~l~v~ 87 (163)
+..+.|.|.
T Consensus 196 ~~s~~~~l~V~ 206 (212)
T 1f97_A 196 MRSEAAHMDAV 206 (212)
T ss_dssp EECCCEEEEEE
T ss_pred cccceEEEEEE
Confidence 334445444
No 429
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=98.71 E-value=1.2e-08 Score=64.71 Aligned_cols=69 Identities=20% Similarity=0.296 Sum_probs=52.7
Q ss_pred EEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceEE-----eceEEEEcchhhhHh
Q psy16425 86 VVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQED-----FPFFKRTKKKKKKKK 156 (163)
Q Consensus 86 v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~-----~~~l~i~~v~~~~~~ 156 (163)
+..+|.+...+ ....+.+|+.+.|.|.+.|.|.|.+.|++++..+......... ...|.|.+++.+|.+
T Consensus 38 v~~~P~~~~~~--~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 111 (154)
T 1fhg_A 38 PHVKPYFTKTI--LDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDA 111 (154)
T ss_dssp CCEEEEEEECC--CCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCGGGCE
T ss_pred CCCCCeEEccC--CcEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCChhcCE
Confidence 33455555543 3567889999999999999999999999999887655444332 348999999999875
No 430
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=98.70 E-value=5e-08 Score=66.04 Aligned_cols=68 Identities=16% Similarity=0.220 Sum_probs=44.4
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeee---eeEE-------------ecCCeEEEEeCCCceEEEEEcccCCCCCe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQ---THVI-------------TKNHRIGVTHSETKAWYLHIREVRESDRG 66 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~---~~~~-------------~~~~r~~~~~~~~~~~~L~i~~v~~~d~G 66 (163)
..+.|.|...+.|.|.|.|++. +..+.... ...+ ....+...... ..|.|.+++.+|+|
T Consensus 152 ~~v~L~C~~~g~p~p~v~W~k~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~L~i~~v~~~D~G 226 (250)
T 2fbo_J 152 NDITMTCPCTDCANANVTWYTG-PTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGA----RNLVIRAAKITDAG 226 (250)
T ss_dssp CCEEECCCEESCTTCEEEEEEE-EECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETT----TEEEECSCCGGGCE
T ss_pred CcEEEEEEecCCCCCeeEEEeC-CCcccccccCcceeEeccCCCCccccCceEecccccCCc----cEEEEecCCcccCE
Confidence 4688999999989999999994 33321100 0000 00122222121 38999999999999
Q ss_pred EEEEEEEeC
Q psy16425 67 WYMCQVNTD 75 (163)
Q Consensus 67 ~Y~C~~~~~ 75 (163)
.|+|.+.|.
T Consensus 227 ~Y~C~a~N~ 235 (250)
T 2fbo_J 227 RVWCELATG 235 (250)
T ss_dssp EEEEEEESS
T ss_pred EEEEEecCC
Confidence 999999874
No 431
>2qhl_A Novel immune-type receptor 10; immunoglobulin variable domain-like beta-sandwich, immune system; 1.56A {Ictalurus punctatus} PDB: 3b5t_A 2qjd_A 2qte_A 2qqq_A
Probab=98.70 E-value=9.4e-08 Score=57.20 Aligned_cols=72 Identities=19% Similarity=0.331 Sum_probs=49.1
Q ss_pred ceeEEEeeee-ccCCCEEEEEEcCC-c---eEEe-e--eee-EE--ec-CCeEEEEeCCCceEEEEEcccCCCCCeEEEE
Q psy16425 3 ARMLIEIGEM-LMAESTVAWLRVDT-Q---TILT-I--QTH-VI--TK-NHRIGVTHSETKAWYLHIREVRESDRGWYMC 70 (163)
Q Consensus 3 ~~~~~~~~~~-~~~~~~i~W~k~~~-~---~~~~-~--~~~-~~--~~-~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 70 (163)
..+.|.|... +.+...|.||+... . .+.. . +.. .. .. .+|+..... .++++|.|.+++++|+|.|.|
T Consensus 15 ~~v~L~C~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~L~I~~~~~~DsG~Y~C 93 (111)
T 2qhl_A 15 ENVTMECSMSKVKDKDKLAWYRQSFGKVPQYFVRYYSSNSGYKFAEGFKDSRFSMTVN-DQKFDLNIIGTREDDGGEYFC 93 (111)
T ss_dssp CCEEECCBCTTCSCGGGEEEEEECTTBCCEEEEEECSSSSCEEECTTCCCTTEEEEES-SSBEEEEESSCCGGGCEEEEE
T ss_pred CCEEEEEEccCCcccceEEEEEecCCCCCEEEEEEeccCCccccccCCCCCcEEEEEc-CCeEEEEECCCChhHCEEEEE
Confidence 4688889876 66678899999642 1 1111 1 111 11 11 567877654 467899999999999999999
Q ss_pred EEEeC
Q psy16425 71 QVNTD 75 (163)
Q Consensus 71 ~~~~~ 75 (163)
.+.+.
T Consensus 94 ~~~~~ 98 (111)
T 2qhl_A 94 GEVEG 98 (111)
T ss_dssp EEEET
T ss_pred EEccC
Confidence 99654
No 432
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=98.70 E-value=2.5e-08 Score=59.07 Aligned_cols=66 Identities=24% Similarity=0.417 Sum_probs=50.5
Q ss_pred CCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceE-Eec---eEEEEcchhhhHh
Q psy16425 89 PPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQE-DFP---FFKRTKKKKKKKK 156 (163)
Q Consensus 89 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~-~~~---~l~i~~v~~~~~~ 156 (163)
+|.+...+ ....+.+|+++.|.|.+.+.|.|.+.|++++..+....+... ..+ .|.|.+++.+|.+
T Consensus 13 ~P~~~~~~--~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G 82 (107)
T 3irg_B 13 PPCFLRFP--RPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAG 82 (107)
T ss_dssp EEEEEECC--CCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCE
T ss_pred CCeeEcCC--ccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCCCcEEEEeCCCEEEEEEccCCHHhCE
Confidence 44454433 356788999999999999999999999999988765544332 233 7999999999875
No 433
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.70 E-value=3.7e-08 Score=58.71 Aligned_cols=66 Identities=23% Similarity=0.329 Sum_probs=49.3
Q ss_pred CCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEec-CCceEE---e--ceEEEEcchhhhHh
Q psy16425 89 PPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQ-GNGQED---F--PFFKRTKKKKKKKK 156 (163)
Q Consensus 89 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~-~~~~~~---~--~~l~i~~v~~~~~~ 156 (163)
+|.+...+ ....+.+|+.+.|.|.+.+.|.|.+.|++++..+... ...... . ..|.|.+++.+|.+
T Consensus 8 ~P~~~~~~--~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G 79 (110)
T 2dm2_A 8 APFFEMKL--KHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDG 79 (110)
T ss_dssp CCCBSSCC--CCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCS
T ss_pred CCEEEecC--cCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCE
Confidence 45555433 3677899999999999999999999999998877542 222221 1 26999999998875
No 434
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.70 E-value=4.1e-08 Score=57.78 Aligned_cols=56 Identities=16% Similarity=0.242 Sum_probs=46.1
Q ss_pred CcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceE--E--eceEEEEcchhhhHh
Q psy16425 99 TDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQE--D--FPFFKRTKKKKKKKK 156 (163)
Q Consensus 99 ~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~--~--~~~l~i~~v~~~~~~ 156 (163)
....+.+|+.+.|.|.+ .|.|.+.|+++|..+....+... . ...|.|.+++.+|.+
T Consensus 15 ~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G 74 (100)
T 2yuz_A 15 TDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEG 74 (100)
T ss_dssp CCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCCSSEEEEECSSEEEEEESSCCGGGCS
T ss_pred CceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCCCcEEEEEeCCEEEEEECCCChhhCE
Confidence 46788999999999999 79999999999999876655443 2 237999999999976
No 435
>1eeq_A Kappa-4 immunoglobulin (light chain); protein stability, hydrogen bonds, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 PDB: 1eeu_A 1lve_A 2lve_A 3lve_A 5lve_A 4lve_A 1efq_A 1qac_A 1ek3_A 2imm_A 1mvu_A 2ap2_A 1ap2_A 3bd3_A* 3bd4_A* 3bd5_A* 2imn_A 3dus_A* 3duu_A* 3dv4_A* ...
Probab=98.70 E-value=5.1e-08 Score=58.64 Aligned_cols=72 Identities=18% Similarity=0.251 Sum_probs=47.5
Q ss_pred ceeEEEeeeeccC------CCEEEEEEcCC-c-e--EEeee-eeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEE
Q psy16425 3 ARMLIEIGEMLMA------ESTVAWLRVDT-Q-T--ILTIQ-THVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQ 71 (163)
Q Consensus 3 ~~~~~~~~~~~~~------~~~i~W~k~~~-~-~--~~~~~-~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 71 (163)
..+.|.|...+.+ .+.|.||+... . + +.... .......+|+.... ..++++|.|.+++++|+|.|.|.
T Consensus 17 ~~v~L~C~~~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~DsG~Y~C~ 95 (114)
T 1eeq_A 17 ERATINCKSSQSVLDSSNSKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSG-SGTDFTLTISSLQAEDVAVYYCQ 95 (114)
T ss_dssp SCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ETTEEEEEESSCCGGGCEEEEEE
T ss_pred CeEEEEEEcCCCccccccCCccEEEEEECCCCCCEEEEEecCccCCCCCCCEEEee-cCCEEEEEECCCCcccCEEEEEE
Confidence 4688888876665 37899999641 1 1 11111 11111246777654 34577899999999999999999
Q ss_pred EEeC
Q psy16425 72 VNTD 75 (163)
Q Consensus 72 ~~~~ 75 (163)
+.+.
T Consensus 96 ~~~~ 99 (114)
T 1eeq_A 96 QYYS 99 (114)
T ss_dssp ECSS
T ss_pred EeeC
Confidence 9543
No 436
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=98.70 E-value=1.2e-06 Score=60.21 Aligned_cols=109 Identities=15% Similarity=0.225 Sum_probs=67.7
Q ss_pred eeEEEeeee-ccC---CCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCc
Q psy16425 4 RMLIEIGEM-LMA---ESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMK 78 (163)
Q Consensus 4 ~~~~~~~~~-~~~---~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~ 78 (163)
.+.|.|... +.| +..++|+| ++..+ ... ...|.|..+...|+|.|+|.+.+. +..
T Consensus 19 sVTLTatVaGGkP~pspyTYqWyK-DG~~I--------sGa-----------T~tLti~s~t~sdSG~YqCvVTDa~Gcs 78 (304)
T 3shs_A 19 GFTLTATVAGDEPLPSNLTYTWTK-DDQPH--------ENN-----------TATLTVADATSENAGSYKVTVQDTDTMT 78 (304)
T ss_dssp CEEEEEEEEESSSCCCCEEEEEEE-TTEEC--------SCC-----------SSEEEESSCCGGGCEEEEEEEEETTTCC
T ss_pred CEEEEEEecCCCCCCCCceEEEEE-CCccc--------cCC-----------cceEEeeeccccCCeEEEEEEEECCCCe
Confidence 456777643 445 45899999 55443 111 127999999999999999999765 333
Q ss_pred eEeEEEEEEcCCc--ccccCCCCcEEEeCCCcEEEEeEe--c-cCC-----CCeEEEEECCeEEE
Q psy16425 79 SQVGYLEVVVPPD--ILDYPTSTDMVIREGSNVTLKCAA--S-GSP-----KPNITWRREGGELI 133 (163)
Q Consensus 79 ~~~~~l~v~~~p~--~~~~~~~~~~~~~~g~~~~l~C~~--~-~~p-----~p~v~W~~~~~~~~ 133 (163)
.....+.+...+. +.... .....+..|..+.|.+.+ . |.| ...+.|++++..+.
T Consensus 79 ~tSs~VtVT~~a~l~i~it~-P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~Is 142 (304)
T 3shs_A 79 SVESEVFLMEEAELIVNITE-PQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVID 142 (304)
T ss_dssp EEECCCEEECBCCEEEEESS-CSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEEE
T ss_pred eeeeeEEEeccCceeEEecC-CCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEcc
Confidence 2222333333222 21111 123445667889999887 5 344 35899999998764
No 437
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=98.69 E-value=2.8e-07 Score=64.49 Aligned_cols=116 Identities=16% Similarity=0.222 Sum_probs=72.4
Q ss_pred cceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCC-CceE
Q psy16425 2 AARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDP-MKSQ 80 (163)
Q Consensus 2 ~~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~-~~~~ 80 (163)
+..+.+.|...-..+..+.|.-.-.... ....+.....|.|.+++.. +.|.|.+...+ ....
T Consensus 14 G~sv~l~Cs~~c~~p~~~~~~t~l~~~~---------------~~~~g~~~~~~~l~~v~~~--~~y~C~~~~~~~~~~~ 76 (291)
T 1mq8_A 14 GGSVLVTCSTSCDQPKLLGIETPLPKKE---------------LLLPGNNRKVYELSNVQED--SQPMCYSNCPDGQSTA 76 (291)
T ss_dssp TCEEEEEEEECCSSCSEEEEECSSCCCC---------------CCCSCSSEEEEEEESCCSC--CCCEEEEECSSCEEEE
T ss_pred CCeEEEEEeCCCCCCccceEEecCCCcc---------------cccCCCceEEEEEEecccC--CeEEEEEEcCCccEEE
Confidence 3467788887533333478864211110 0001111225788888854 46999996543 3345
Q ss_pred eEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEecc-CCCC--eEEEEECCeEEEec
Q psy16425 81 VGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASG-SPKP--NITWRREGGELIAQ 135 (163)
Q Consensus 81 ~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p--~v~W~~~~~~~~~~ 135 (163)
.+.+.|..+|........ ...+.+|+.++|.|.+.+ .|.+ .|+|++++..+...
T Consensus 77 ~v~l~V~~~P~~v~I~~~-~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~ 133 (291)
T 1mq8_A 77 KTFLTVYWTPERVELAPL-PSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKRE 133 (291)
T ss_dssp ECEEEECBCCSCCCBCCC-CSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEE
T ss_pred EEEEEEecCCCCCEEecC-CccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeecc
Confidence 567888888876554432 234788999999999986 4554 58999999887544
No 438
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=98.69 E-value=2.7e-08 Score=58.06 Aligned_cols=58 Identities=29% Similarity=0.542 Sum_probs=45.7
Q ss_pred CcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEec--CCceE----EeceEEEEcchhhhHh
Q psy16425 99 TDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQ--GNGQE----DFPFFKRTKKKKKKKK 156 (163)
Q Consensus 99 ~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~--~~~~~----~~~~l~i~~v~~~~~~ 156 (163)
....+.+|+++.|.|.+.+.|.|.+.|++++..+... .+... ....|.|.+++.+|.+
T Consensus 13 ~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G 76 (100)
T 3irg_A 13 SDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGG 76 (100)
T ss_dssp SEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCE
T ss_pred CcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEecCCEEEEEEeecCcccCE
Confidence 3567889999999999999999999999999887522 22222 1267999999999875
No 439
>2yz1_A Tyrosine-protein phosphatase non-receptor type substrate 1; beta-sandwich, structural genomics, NPPSFA; 1.40A {Mus musculus}
Probab=98.69 E-value=5e-08 Score=59.14 Aligned_cols=71 Identities=15% Similarity=0.243 Sum_probs=44.1
Q ss_pred ceeEEEeeeecc-CCCEEEEEEcCCce--EEeeeeeEEecCCeEEEE----eCCCceEEEEEcccCCCCCeEEEEEEEeC
Q psy16425 3 ARMLIEIGEMLM-AESTVAWLRVDTQT--ILTIQTHVITKNHRIGVT----HSETKAWYLHIREVRESDRGWYMCQVNTD 75 (163)
Q Consensus 3 ~~~~~~~~~~~~-~~~~i~W~k~~~~~--~~~~~~~~~~~~~r~~~~----~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 75 (163)
.++.|.|...+. +.+.|.||+.++.. +...... ....|+... ......++|.|.+++++|+|.|.|.+.+.
T Consensus 23 ~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~i~~~~~--~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 100 (120)
T 2yz1_A 23 DSTVLNCTLTSLLPVGPIKWYRGVGQSRLLIYSFTG--EHFPRVTNVSDATKRNNMDFSIRISNVTPEDAGTYYCVKFQK 100 (120)
T ss_dssp CCEEECCEESCCCSCCCEEEEESSSTTCEEEEEECE--ECTTTCCSEEECCBSSTTBCCEEECSCCGGGCEEEEEEEEEC
T ss_pred CCEEEEeEECCCCCCcEEEEEcCCCCCcEEEEEcCC--cccCcccceeeccccCCCeEEEEECCCCHHHCEEEEEEEEcC
Confidence 468888887654 56789999964321 2111110 011233211 11234568999999999999999999654
No 440
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=98.69 E-value=2.1e-07 Score=62.68 Aligned_cols=90 Identities=18% Similarity=0.217 Sum_probs=50.7
Q ss_pred ceeEEEeeeeccCCCEEEEEEc---CCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCc
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRV---DTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMK 78 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~---~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~ 78 (163)
..+.|.|...+.|.+.+.|++. ++..+...+...... ..............|.|.+++.+|+|.|+|.+.|. +..
T Consensus 130 ~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~ 208 (241)
T 3grw_A 130 SDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTV-LKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVA 208 (241)
T ss_dssp CCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCEEE-EEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCEE
T ss_pred CEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCceeeee-eeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcceE
Confidence 3578899999999999999993 222221100000000 00000111123458999999999999999999776 445
Q ss_pred eEeEEEEEEcCCccc
Q psy16425 79 SQVGYLEVVVPPDIL 93 (163)
Q Consensus 79 ~~~~~l~v~~~p~~~ 93 (163)
...+.|.|..+|...
T Consensus 209 ~~~~~l~V~~~p~~~ 223 (241)
T 3grw_A 209 EKAFWLSVHGPRAAE 223 (241)
T ss_dssp EEEEEEEC-------
T ss_pred EEEEEEEecCCCCCC
Confidence 555667776666543
No 441
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=98.69 E-value=9.6e-08 Score=63.31 Aligned_cols=71 Identities=14% Similarity=0.148 Sum_probs=47.6
Q ss_pred ceeEEEeeeecc-CCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCC--Cce
Q psy16425 3 ARMLIEIGEMLM-AESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDP--MKS 79 (163)
Q Consensus 3 ~~~~~~~~~~~~-~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~--~~~ 79 (163)
..+.|.|...+. |.+.|.|++ ++..+... ... ..|.|.+++.+|+|.|+|.+.|.. ..+
T Consensus 104 ~~v~L~C~~~~~~p~~~v~W~k-~g~~~~~~-------------~~~----~~L~i~~v~~~D~G~Y~C~a~n~~~~~~s 165 (204)
T 3sgj_C 104 DPIHLRCHSWKNTALHKVTYLQ-NGKGRKYF-------------HHN----SDFYIPKATLKDSGSYFCRGLVGSKNVSS 165 (204)
T ss_dssp CCEEEEEEEGGGCCCEEEEEEE-TTEEEEEE-------------EEC----CCEEESSCCGGGCEEEEEEEEETTEEEEC
T ss_pred CcEEEEEEecCCCCCceEEEEE-CCcEeecc-------------cCC----ceEEECcCCcccCEEEEEEEEeCCCceec
Confidence 367888888554 668899999 55544211 011 279999999999999999998742 334
Q ss_pred EeEEEEEEcCCc
Q psy16425 80 QVGYLEVVVPPD 91 (163)
Q Consensus 80 ~~~~l~v~~~p~ 91 (163)
..+.|.|..+|.
T Consensus 166 ~~~~l~V~~~~~ 177 (204)
T 3sgj_C 166 ETVQITITQGLA 177 (204)
T ss_dssp CCEEEEEEC---
T ss_pred CcEEEEEeCcCC
Confidence 455677765543
No 442
>1ymm_D T cell receptor alpha chain; protein-protein complex, T cell repertoire, auto-immunity, I system; HET: NAG; 3.50A {Homo sapiens} SCOP: b.1.1.1
Probab=98.69 E-value=2.2e-09 Score=71.62 Aligned_cols=118 Identities=18% Similarity=0.215 Sum_probs=47.3
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCC-c----eEEeeeeeEEecCCeEEEEeC-CCceEEEEEcccCCCCCeEEEEEEEeCC
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDT-Q----TILTIQTHVITKNHRIGVTHS-ETKAWYLHIREVRESDRGWYMCQVNTDP 76 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~-~----~~~~~~~~~~~~~~r~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~~~~~~ 76 (163)
..+.|.|...+.. ..|.||+... . .++..........+|+.+..+ ..++++|.|.+++.+|+|.|.|.+.+..
T Consensus 17 ~~v~L~C~~s~~~-~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~~~ 95 (207)
T 1ymm_D 17 ENATMNCSYKTSI-NNLQWYRQNSGRGLVHLILIRSNEREKHSGRLRVTLDTSKKSSSLLITASRAADTASYFCATDTTS 95 (207)
T ss_dssp CCCCBCCBCSSCE-EEEEEECCCSSCCCCCCCEEESSSCCCCSSSCCBCCBGGGTBCCBCCSSCCSTTCSCCEEEEEETT
T ss_pred CCEEEEEEecCCC-ceEEEEEECCCCCcEEEEEEcCCCccccCCCEEEEEcCCCCEEEEEECcCCcccCceEEEEEEcCC
Confidence 4677788765555 7899998642 1 122221111123566665532 2356789999999999999999996531
Q ss_pred ---C--ceEeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEecc-CCCCeE
Q psy16425 77 ---M--KSQVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASG-SPKPNI 123 (163)
Q Consensus 77 ---~--~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p~v 123 (163)
. ......|.|...+... .|. ........+.+.|.|.+.+ +|.|.+
T Consensus 96 ~~~~~~~g~gt~L~V~~~~~~~-~P~-V~~~~~~~~~vtL~C~~~gf~P~p~v 146 (207)
T 1ymm_D 96 GTYKYIFGTGTRLKVLANIQNP-DPA-VYQLRDSKSSDKSVCLFTDFDSQTNV 146 (207)
T ss_dssp SCSCEEECC--------------------------------------------
T ss_pred CcceeeECCCEEEEEECCCCCC-CCE-EEecCCCCCCeEEEEEccccccCCcc
Confidence 1 1122345554321100 010 0000011247899999987 688866
No 443
>1nko_A Sialic acid binding IG-like lectin 7; immunoglobulin, siglec7, immune system; 1.45A {Homo sapiens} SCOP: b.1.1.1 PDB: 2g5r_A* 1o7v_A* 2df3_A* 1o7s_A* 2hrl_A*
Probab=98.69 E-value=5.7e-08 Score=59.95 Aligned_cols=73 Identities=19% Similarity=0.230 Sum_probs=47.7
Q ss_pred ceeEEEeeee-------ccCCCEEEEEEcCCc-----eEEeeeee---EEecCCeEEEEeCC-CceEEEEEcccCCCCCe
Q psy16425 3 ARMLIEIGEM-------LMAESTVAWLRVDTQ-----TILTIQTH---VITKNHRIGVTHSE-TKAWYLHIREVRESDRG 66 (163)
Q Consensus 3 ~~~~~~~~~~-------~~~~~~i~W~k~~~~-----~~~~~~~~---~~~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G 66 (163)
..+.|.|... ......|.||+.... .+...... .....+|+.+..+. .++++|.|.+++.+|+|
T Consensus 22 ~~v~L~C~~~~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG 101 (132)
T 1nko_A 22 MCVHVRCSFSYPVDSDTDSDPVHGYWFRAGNDISWKAPVATNNPAWAVQEETRDRFHLLGDPQTKNCTLSIRDARMSDAG 101 (132)
T ss_dssp CCEEECEEEECCCCTTTTTSCCEEEEEEC-----CCSCSEESCTTCCCCGGGTTTEEECSCGGGTBCCEEECSCCGGGCE
T ss_pred CeEEEEccccCCCccccCCCccEEEEEECCCCCCcccEEEeCCCccccccccCccEEEeCCCCCCceEEEEcccCcccCe
Confidence 4678888865 345678999995421 12211100 01234788876542 46779999999999999
Q ss_pred EEEEEEEeC
Q psy16425 67 WYMCQVNTD 75 (163)
Q Consensus 67 ~Y~C~~~~~ 75 (163)
.|.|.+.+.
T Consensus 102 ~Y~C~v~~~ 110 (132)
T 1nko_A 102 RYFFRMEKG 110 (132)
T ss_dssp EEEEEEEET
T ss_pred eEEEEEEcC
Confidence 999999654
No 444
>1pew_A JTO2, A lambda-6 type immunoglobulin light chain, domain; beta sheet, immune system; 1.60A {Homo sapiens} SCOP: b.1.1.1 PDB: 1cd0_A 1pw3_A 2cd0_A 2w0k_A 3b5g_A 3bdx_A* 2w0l_A
Probab=98.68 E-value=4.4e-08 Score=58.46 Aligned_cols=73 Identities=15% Similarity=0.158 Sum_probs=47.5
Q ss_pred ceeEEEee-eeccC-CCEEEEEEcCCceEE--ee-eeeEEecCCeEEEEe-CCCceEEEEEcccCCCCCeEEEEEEEeC
Q psy16425 3 ARMLIEIG-EMLMA-ESTVAWLRVDTQTIL--TI-QTHVITKNHRIGVTH-SETKAWYLHIREVRESDRGWYMCQVNTD 75 (163)
Q Consensus 3 ~~~~~~~~-~~~~~-~~~i~W~k~~~~~~~--~~-~~~~~~~~~r~~~~~-~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 75 (163)
..+.|.|. ..+.+ .+.+.||+....+.. .. ........+|+.... ...+.++|.|.+++++|+|.|.|.+.+.
T Consensus 16 ~~v~L~C~v~~~~~~~~~v~W~r~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 94 (109)
T 1pew_A 16 KTVTISCTRSSGNIASNYVQWYQQRSAPITVIYEDNQRPSGVPDRFAGSIDRSSNSASLTISGLKTEDEADYYCQSYDA 94 (109)
T ss_dssp SCEEEEEEESSSCGGGSCCEEEEC-CCCEEEEBTTTBCCTTCCTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCEEEEEEeCCCCCCCccEEEEEECCCCcEEEEecCCcCCCCCCcEEEEeccCCCEEEEEECCCChhhCEEEEEEEEeC
Confidence 46888888 65554 478999996522111 00 000011246777764 3346789999999999999999999653
No 445
>4f9l_D 20.1 anti-BTN3A1 antibody fragment; B7 superfamily, butyrophilin, CD277, immune system; HET: NAG; 3.14A {Mus musculus}
Probab=98.68 E-value=1.5e-07 Score=63.78 Aligned_cols=125 Identities=17% Similarity=0.215 Sum_probs=69.5
Q ss_pred ceeEEEeeeeccCCCEEEEEEcC-Cce----EEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCC-
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVD-TQT----ILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDP- 76 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~-~~~----~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~- 76 (163)
..+.|.|.....-...+.||++. +.. ++.......-...|+.-+..+ .+++|.|.+++++|++.|.|......
T Consensus 17 ~~vtisC~~S~~i~~y~~WyqQ~pG~~P~lLiy~~s~~~sGvp~RFSgS~Sg-t~ftLtIs~lq~eD~A~YyC~~~~~~~ 95 (259)
T 4f9l_D 17 DTITITCHASQNINLWLSWYQQRPGNIPKLLIYRASNLHTGVPSRFSGSGSA-TGFTLTISSLQPEDIATYYCQQGHSYP 95 (259)
T ss_dssp CEEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEET-TEEEEEEESCCGGGCEEEEEEECSSSS
T ss_pred CCEEEEEEcCCCCCCCEEEEEECCCCCCEEEEECCCccCCCCCCCEEeeccC-CeEEEEEcccChhhCEEEEEeecCCCC
Confidence 46788886654444568999863 221 111111111123566655443 56789999999999999999863221
Q ss_pred -CceEeEEEEEEc---CCcc-----------------cccCCCCcEEEeCCCcEEEEeEeccCCC--CeEEEEEC
Q psy16425 77 -MKSQVGYLEVVV---PPDI-----------------LDYPTSTDMVIREGSNVTLKCAASGSPK--PNITWRRE 128 (163)
Q Consensus 77 -~~~~~~~l~v~~---~p~~-----------------~~~~~~~~~~~~~g~~~~l~C~~~~~p~--p~v~W~~~ 128 (163)
.......|++.- .|.. ..........+.+|+++.|.|.+.|+.- -.+.|.+.
T Consensus 96 ~tFG~GTkLeikr~~aa~~~s~~~~s~~a~ssGv~sqvqL~eSG~~lvkPG~Sl~LSC~aSG~tfs~y~~~WvRQ 170 (259)
T 4f9l_D 96 YTFGGGTKLDIKRADAGGGGSGGGGSGGGGSGGGGSQVQLQESGAELVKPGASVKLSCKASGYTFTRYYLYWVKQ 170 (259)
T ss_dssp CCBCCCCEECBCCC----------------------CCCEEEECCCEEESSSCEEEEEEEESSCGGGSCEEEEEE
T ss_pred CCccCCeEEEEeccccCccccccccccccccCCccccceEEeECCCEECCCCcEEEEEeeeCCCcccCcEEEEEE
Confidence 111122333321 0100 0000111345778999999999998642 34778763
No 446
>1oaq_L Light chain; antibody, allergy, IGE, conformational diversity, multispecificity; 1.50A {Rattus rattus} SCOP: b.1.1.1 PDB: 1ocw_L 2bjm_L* 1oau_L* 1oar_L* 1oaz_L 1mfa_L* 1a6v_L* 1oax_L* 1oay_L* 1a6w_L* 1a6u_L 1dl7_L*
Probab=98.68 E-value=6.3e-08 Score=58.81 Aligned_cols=72 Identities=11% Similarity=0.145 Sum_probs=47.8
Q ss_pred ceeEEEeeeeccC---CCEEEEEEcCC-ce---EEee-eeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEe
Q psy16425 3 ARMLIEIGEMLMA---ESTVAWLRVDT-QT---ILTI-QTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNT 74 (163)
Q Consensus 3 ~~~~~~~~~~~~~---~~~i~W~k~~~-~~---~~~~-~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~ 74 (163)
..+.|.|.....+ ...+.||+... .. +... ........+|+..... .++++|.|.+++.+|+|.|.|.+.+
T Consensus 16 ~~v~L~C~~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~-~~~~~L~I~~~~~~DsG~Y~C~~~~ 94 (120)
T 1oaq_L 16 ETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLI-GNKAALTITGAQTEDEAIYFCALWY 94 (120)
T ss_dssp CEEEEEEEETTBCCCGGGCCEEEEEETTTEEEEEEETTTEECTTSCTTEEEEEE-TTEEEEEEESCCGGGCEEEEEEEEE
T ss_pred CCEEEEEEeCCCccCCCCEEEEEEeCCCCCCeEEEEEcCccCCCCCCceEEecC-CCeEEEEECCCChhhCeEEEEEEcc
Confidence 4688888876654 57899998532 11 1111 1111112467776643 3578999999999999999999965
Q ss_pred C
Q psy16425 75 D 75 (163)
Q Consensus 75 ~ 75 (163)
.
T Consensus 95 ~ 95 (120)
T 1oaq_L 95 S 95 (120)
T ss_dssp T
T ss_pred C
Confidence 4
No 447
>2z35_A T-cell receptor alpha-chain; immune receptor, immune system; 2.20A {Mus musculus} PDB: 2pxy_A 2z31_A 1ac6_A
Probab=98.68 E-value=8.6e-08 Score=57.44 Aligned_cols=71 Identities=15% Similarity=0.228 Sum_probs=48.1
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCC-c-e--EEeee-eeEEecCCeEEEEe-CCCceEEEEEcccCCCCCeEEEEEEE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDT-Q-T--ILTIQ-THVITKNHRIGVTH-SETKAWYLHIREVRESDRGWYMCQVN 73 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~-~-~--~~~~~-~~~~~~~~r~~~~~-~~~~~~~L~i~~v~~~d~G~Y~C~~~ 73 (163)
..+.|.|.....+...|.||+... . + +.... .......+|+.+.. ...++++|.|.+++++|+|.|.|.+.
T Consensus 16 ~~v~L~C~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~ 92 (112)
T 2z35_A 16 DFLTIHCNYSASGYPALFWYVQYPGEGPQFLFRASRDKEKGSSRGFEATYNKEATSFHLQKASVQESDSAVYYCALS 92 (112)
T ss_dssp CCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSTTCEEEETTEEEECBTTTTBCCEEESSCCSTTCSEEEEEEE
T ss_pred CCEEEEEEECCCCCCeEEEEEECCCCCcEEeEEEecccCCccCCCEEEEEcCCCCEEEEEECCCChhhCEEEEEEEE
Confidence 468888987776778999999642 1 1 11111 00111246777663 23467799999999999999999995
No 448
>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune system; NMR {Mus musculus}
Probab=98.68 E-value=1.9e-07 Score=70.91 Aligned_cols=120 Identities=15% Similarity=0.182 Sum_probs=70.0
Q ss_pred eEEEeeeeccCC----CEEEEEEcCCceEEeeeee--EEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCC-
Q psy16425 5 MLIEIGEMLMAE----STVAWLRVDTQTILTIQTH--VITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPM- 77 (163)
Q Consensus 5 ~~~~~~~~~~~~----~~i~W~k~~~~~~~~~~~~--~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~- 77 (163)
..|.|.+.+..+ ..|+|++. +..+...... ....++.+.+. ..|.|......|.+.|+|.+.+...
T Consensus 361 ~~l~C~~~~~~p~~~~i~v~W~~~-~~~~~~~~t~~~~~~~n~~~~~~------s~L~i~~~~~~~~~~y~C~v~~~~~~ 433 (551)
T 1ntl_A 361 PKVTCVVVDISKDDPEVQFSWFVD-DVEVHTAQTQPREEQFNSTFRSV------SELPIMHQDWLNGKEFKCRVNSAAFP 433 (551)
T ss_pred cceEEEEEecccCCCceEEEEEEC-CccccccccCCceECCCCeEEEE------EeeEcCHHHccCCceEEEEEecCCCC
Confidence 345555554443 58999994 4443211110 01122333332 2688888888889999999965532
Q ss_pred ce--EeEEEE--EEcCCcccccCCCCcEEEeCCCcEEEEeEecc-CCC-CeEEEEECCeEEE
Q psy16425 78 KS--QVGYLE--VVVPPDILDYPTSTDMVIREGSNVTLKCAASG-SPK-PNITWRREGGELI 133 (163)
Q Consensus 78 ~~--~~~~l~--v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~-p~v~W~~~~~~~~ 133 (163)
.. ..+.+. ..++|.+...+. ......|+.+.|.|.+.+ +|+ ..|+|++++..+.
T Consensus 434 ~~~~~~~~~~~~~~~~P~V~~~~~--~~~~~~~~~~~L~C~v~gfyP~~i~v~W~k~g~~~~ 493 (551)
T 1ntl_A 434 APIEKTISKTKGRPKAPQLYTIPP--PKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAE 493 (551)
T ss_pred CCeEEEEecCCCCCcCCceEEeCC--ChhhccCCceEEEEEEEEeECCCCEEEEEECCEEcc
Confidence 11 222222 234565544332 122346889999999998 454 4799999998764
No 449
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=98.68 E-value=9.6e-08 Score=64.38 Aligned_cols=73 Identities=14% Similarity=0.242 Sum_probs=49.4
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCC-ce---EEe-eeeeEEecCCeEEEEe-CCCceEEEEEcccCCCCCeEEEEEEEeC
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDT-QT---ILT-IQTHVITKNHRIGVTH-SETKAWYLHIREVRESDRGWYMCQVNTD 75 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~-~~---~~~-~~~~~~~~~~r~~~~~-~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 75 (163)
..+.|.|...+.|.+.|.|++.+. .. +.. .........+|+.... ......+|.|.+++.+|+|.|+|.+.+.
T Consensus 143 ~~v~L~C~~~~~p~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 221 (238)
T 2p1y_A 143 ETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDT 221 (238)
T ss_dssp SCEEEEEECCCTTCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEET
T ss_pred CeEEEEEEEecCCCCcEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeC
Confidence 367889999888999999999542 11 111 0000112235666553 2335678999999999999999999765
No 450
>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}
Probab=98.67 E-value=4.4e-07 Score=55.89 Aligned_cols=71 Identities=18% Similarity=0.183 Sum_probs=46.2
Q ss_pred ceeEEEeeee---ccCCCEEEEEEcCCce---EEeeee----------------eE--EecCCeEEEEeCCCceEEEEEc
Q psy16425 3 ARMLIEIGEM---LMAESTVAWLRVDTQT---ILTIQT----------------HV--ITKNHRIGVTHSETKAWYLHIR 58 (163)
Q Consensus 3 ~~~~~~~~~~---~~~~~~i~W~k~~~~~---~~~~~~----------------~~--~~~~~r~~~~~~~~~~~~L~i~ 58 (163)
..+.|.|... ..+.+.|.||+.+... +..... .. ....+|+.+.. .++.+|.|.
T Consensus 20 ~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~--~~~~sL~I~ 97 (135)
T 1xt5_A 20 GTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVAN--LAAPTLRLT 97 (135)
T ss_dssp SCEEECCEEEEETCCSCCEEEEEEESSSSSEEEEEEEEECCCCTTCCCCTTSEEEEECGGGTTTEEESC--TTSCCEEEC
T ss_pred CCEEEeeEeecCCCCCccEEEEEeeCCCCCceEEEEeccccccccccccccccccccChhhcCcEEEec--CCCCeEEEC
Confidence 4678888754 3577899999964321 111100 00 11226766544 235689999
Q ss_pred ccCCCCCeEEEEEEEeC
Q psy16425 59 EVRESDRGWYMCQVNTD 75 (163)
Q Consensus 59 ~v~~~d~G~Y~C~~~~~ 75 (163)
+++.+|+|.|.|.+.+.
T Consensus 98 ~v~~~D~G~Y~C~v~~~ 114 (135)
T 1xt5_A 98 HVHPQDGGRYWCQVAQW 114 (135)
T ss_dssp SCCGGGCEEEEEEEECS
T ss_pred CCChhhCcEEEEEEEcC
Confidence 99999999999999654
No 451
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=98.67 E-value=1.5e-08 Score=59.38 Aligned_cols=57 Identities=18% Similarity=0.328 Sum_probs=46.5
Q ss_pred cEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCc---eE--EeceEEEEcchhhhHh
Q psy16425 100 DMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNG---QE--DFPFFKRTKKKKKKKK 156 (163)
Q Consensus 100 ~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~---~~--~~~~l~i~~v~~~~~~ 156 (163)
...+.+|+++.|.|.+.|.|.|.+.|++++..+...... .. .+..|.|.+++.+|.+
T Consensus 17 ~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G 78 (100)
T 3caf_A 17 LHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKG 78 (100)
T ss_dssp EEEECTTCCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCE
T ss_pred EEEecCCCEEEEEEEccccCCCEEEEEECCEEcccccccccEEEecCeEEEEEccCCcCCCE
Confidence 567889999999999999999999999999887654332 11 3358999999999875
No 452
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=98.67 E-value=5.2e-08 Score=58.86 Aligned_cols=69 Identities=16% Similarity=0.225 Sum_probs=49.3
Q ss_pred EEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceE--------EeceEEEEcchhhh
Q psy16425 83 YLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQE--------DFPFFKRTKKKKKK 154 (163)
Q Consensus 83 ~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~--------~~~~l~i~~v~~~~ 154 (163)
.|.|.++|.+...... . ......|.|.+.|.|.|.+.|++++..+........ ..+.|.|.+++.+|
T Consensus 2 ~L~V~~pP~i~~~~~~---~--~~~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 76 (118)
T 1wwc_A 2 ALTVYYPPRVVSLEEP---E--LRLEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYN 76 (118)
T ss_dssp --CCCCCCCCCCCCCC---C--CCCEEEEEEEEECSSCCEEEEEETTEECCCSSSEEEEEEECSSEEEEEEEEESCCGGG
T ss_pred EEEEecCCceeccCCC---e--eccceEEEEEeeeeCCCeEEEEECCEECCCCCceeEEEeccCccccEEEEECCCChhc
Confidence 4566777776554321 1 225678899999999999999999998866543332 35689999999998
Q ss_pred Hh
Q psy16425 155 KK 156 (163)
Q Consensus 155 ~~ 156 (163)
++
T Consensus 77 ~G 78 (118)
T 1wwc_A 77 NG 78 (118)
T ss_dssp CE
T ss_pred CE
Confidence 76
No 453
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=98.67 E-value=4.2e-08 Score=57.74 Aligned_cols=65 Identities=17% Similarity=0.242 Sum_probs=49.0
Q ss_pred CCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceE-Eec---eEEEEcchhhhHh
Q psy16425 89 PPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQE-DFP---FFKRTKKKKKKKK 156 (163)
Q Consensus 89 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~-~~~---~l~i~~v~~~~~~ 156 (163)
+|.+...+ ....+.+|+++.|.|.+.+.|.| +.|++++..+....+... ..+ .|.|.+++.+|.+
T Consensus 8 pp~~~~~~--~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G 76 (103)
T 2e7b_A 8 PVRFQEAL--KDLEVLEGGAATLRCVLSSVAAP-VKWCYGNNVLRPGDKYSLRQEGAMLELVVRNLRPQDSG 76 (103)
T ss_dssp CCCCTBCC--CCEEEESSSCEEEEEECSSCCCS-CEEEESSSBCCCSSSEEEEECSSEEEEEECSCCTTTCC
T ss_pred CCEEEecC--ccEEEECCCcEEEEEEEeCCCCC-eEEEECCEECCCCCcEEEEEcCCEEEEEEccCCcccCE
Confidence 44444433 36788999999999999999988 999999988755444332 222 5999999999876
No 454
>1u3h_A T-cell receptor alpha-chain; complex, immune system; 2.42A {Mus musculus} SCOP: b.1.1.1 PDB: 1b88_A 1kj2_A* 1kb5_A 1d9k_A*
Probab=98.11 E-value=2.6e-09 Score=64.06 Aligned_cols=72 Identities=14% Similarity=0.237 Sum_probs=48.5
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCC-ce---E-EeeeeeEEecCCeEEEEeC-CCceEEEEEcccCCCCCeEEEEEEEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDT-QT---I-LTIQTHVITKNHRIGVTHS-ETKAWYLHIREVRESDRGWYMCQVNT 74 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~-~~---~-~~~~~~~~~~~~r~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~~~~ 74 (163)
..+.|.|...+.+.+.|.||+... .. + ...........+|+.+..+ ..++++|.|.+++++|+|.|.|.+.+
T Consensus 15 ~~v~L~C~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 92 (110)
T 1u3h_A 15 ETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAASA 92 (110)
Confidence 367888888777788999998531 11 1 1111111233567766553 33567899999999999999999954
No 455
>2jjs_C Leukocyte surface antigen CD47; signal regulatory protein alpha, immunoglobulin superfamily, transmembrane, phosphoprotein, paired receptor; HET: NAG; 1.85A {Homo sapiens} PDB: 2jjt_C* 2vsc_A*
Probab=98.66 E-value=4.2e-08 Score=59.87 Aligned_cols=86 Identities=17% Similarity=0.137 Sum_probs=51.2
Q ss_pred cceeEEEeeeeccCC-----CEEEEEEcCCceEEeeeee-EE-ec---CCeEEEEeCC--CceEEEEEcccCC-CCCeEE
Q psy16425 2 AARMLIEIGEMLMAE-----STVAWLRVDTQTILTIQTH-VI-TK---NHRIGVTHSE--TKAWYLHIREVRE-SDRGWY 68 (163)
Q Consensus 2 ~~~~~~~~~~~~~~~-----~~i~W~k~~~~~~~~~~~~-~~-~~---~~r~~~~~~~--~~~~~L~i~~v~~-~d~G~Y 68 (163)
..+++|.|.....+. ..|.|++ ++..+....+. .. .. -.+..+..+. .|+++|+|.+++. +|+|.|
T Consensus 16 n~~vtLpC~l~~~~~~~~~~m~V~W~~-~~~~i~~~~G~~~~~~q~~~~~~a~l~~~~l~~GnaSL~i~~v~~~sD~G~Y 94 (127)
T 2jjs_C 16 NDTVVIPCFVTNMEAQNTTEVYVKWKF-KGRDIYTFDGALNKSTVPTDFSSAKIEVSQLLKGDASLKMDKSDAVSHTGNY 94 (127)
T ss_dssp CSEEEECCBBSSCCCSSGGGEEEEEEE-TTEEEEEEEGGGTEEECCGGGTTCBCCGGGGGGTBCCEEEEHHHHHTSCEEE
T ss_pred CCCEEEEEEeCCcCCCCcceEEEEEEE-CCeEeEeeCCceeeccccccccceEechhhhccCcEEEEEcccccccCCcEE
Confidence 457889998774333 5799999 45554432221 11 00 0111222221 3678999999998 699999
Q ss_pred EEEEEeCCCceEeEEEEEEcC
Q psy16425 69 MCQVNTDPMKSQVGYLEVVVP 89 (163)
Q Consensus 69 ~C~~~~~~~~~~~~~l~v~~~ 89 (163)
+|++..... .....+++.+.
T Consensus 95 tC~v~~~~~-~~~~~i~Lkv~ 114 (127)
T 2jjs_C 95 TCEVTELTR-EGETIIELKYR 114 (127)
T ss_dssp EEEEEETTE-EEEEEEEEEEC
T ss_pred EEEEEeCCc-eEEEEEEEEEE
Confidence 999965533 33445555543
No 456
>1dlf_L Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 1wz1_L* 2dlf_L 1maj_A 1mak_A 1ktr_L 2cju_L* 2uud_K* 1dsf_L 3nn8_B 1n4x_L 1bfv_L* 1cfv_L* 2bfv_L* 1wt5_C
Probab=98.65 E-value=9.1e-08 Score=57.44 Aligned_cols=72 Identities=17% Similarity=0.247 Sum_probs=47.4
Q ss_pred ceeEEEeeeeccC-----CCEEEEEEcCC-c-e--EEeee-eeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEE
Q psy16425 3 ARMLIEIGEMLMA-----ESTVAWLRVDT-Q-T--ILTIQ-THVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQV 72 (163)
Q Consensus 3 ~~~~~~~~~~~~~-----~~~i~W~k~~~-~-~--~~~~~-~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~ 72 (163)
..+.|.|...+.+ .+.|.||+... . + +.... .......+|+.... ...+++|.|.+++++|+|.|.|.+
T Consensus 17 ~~v~L~C~~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~R~~~~~-~~~~~~L~I~~v~~~DsG~Y~C~~ 95 (113)
T 1dlf_L 17 NQASISCRSSQSLVHSNGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSG-SGTDFTLKISRVEAEDLGVYFCSQ 95 (113)
T ss_dssp CCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ETTEEEEEECSCCGGGCEEEEEEE
T ss_pred CCEEEEEEccccccccCCCceEEEEEECCCCCCeEEEEecCccCCCCCCCEEEEc-cCCEEEEEECCCChHHCEEEEEEE
Confidence 4688888876655 47899998642 1 1 11111 11111246777654 335778999999999999999999
Q ss_pred EeC
Q psy16425 73 NTD 75 (163)
Q Consensus 73 ~~~ 75 (163)
.+.
T Consensus 96 ~~~ 98 (113)
T 1dlf_L 96 STH 98 (113)
T ss_dssp CSS
T ss_pred ecC
Confidence 543
No 457
>3bik_B Programmed cell death protein 1; CO-stimulation, receptor-ligand complex, immunoglobulin-like sandwich, T cell, B cell, programmed death; 2.65A {Mus musculus} SCOP: b.1.1.1
Probab=98.65 E-value=1.2e-06 Score=54.21 Aligned_cols=73 Identities=15% Similarity=0.278 Sum_probs=49.1
Q ss_pred ceeEEEeeeeccC-CCEEEEEEcC-Cc-e--EEe-eee-eEEecCCeEEEEeC-CCceEEEEEcccCCCCCeEEEEEEEe
Q psy16425 3 ARMLIEIGEMLMA-ESTVAWLRVD-TQ-T--ILT-IQT-HVITKNHRIGVTHS-ETKAWYLHIREVRESDRGWYMCQVNT 74 (163)
Q Consensus 3 ~~~~~~~~~~~~~-~~~i~W~k~~-~~-~--~~~-~~~-~~~~~~~r~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~~~~ 74 (163)
..+.|.|...... ...+.||+.. +. . +.. ... ......+|+....+ ....++|.|.+++.+|+|.|.|.+..
T Consensus 25 ~~vtL~C~~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~ 104 (134)
T 3bik_B 25 ANATFTCSLSNWSEDLMLNWNRLSPSNQTEKQAAFSNGLSQPVQDARFQIIQLPNRHDFHMNILDTRRNDSGIYLCGAIS 104 (134)
T ss_dssp SCEEEEEEESSCCTTCEEEEEEECTTCCEEEEEEEETTEEEESSCTTEEEEECTTSSEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCEEEEEEeCCCCCCcEEEEEEcCCCCCceEEEEEcCCCCCcccCCCEEEEecCCCCEEEEEECCCChHHCEEEEEEEEe
Confidence 4678888876543 4789999963 21 1 111 111 12234678887643 34678999999999999999999865
Q ss_pred C
Q psy16425 75 D 75 (163)
Q Consensus 75 ~ 75 (163)
.
T Consensus 105 ~ 105 (134)
T 3bik_B 105 L 105 (134)
T ss_dssp C
T ss_pred C
Confidence 4
No 458
>3bp6_A Programmed cell death protein 1; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3rnk_A 3sbw_A 3bp5_A 1npu_A 3rnq_A
Probab=98.65 E-value=1.1e-06 Score=53.01 Aligned_cols=73 Identities=15% Similarity=0.284 Sum_probs=49.6
Q ss_pred ceeEEEeeeeccC-CCEEEEEEcCC-c-e--EEee-ee-eEEecCCeEEEEeC-CCceEEEEEcccCCCCCeEEEEEEEe
Q psy16425 3 ARMLIEIGEMLMA-ESTVAWLRVDT-Q-T--ILTI-QT-HVITKNHRIGVTHS-ETKAWYLHIREVRESDRGWYMCQVNT 74 (163)
Q Consensus 3 ~~~~~~~~~~~~~-~~~i~W~k~~~-~-~--~~~~-~~-~~~~~~~r~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~~~~ 74 (163)
..+.|.|...... ...+.||+... . + +... .. ......+|+....+ ....++|.|.+++.+|+|.|.|.+.+
T Consensus 15 ~~vtL~C~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~ 94 (117)
T 3bp6_A 15 ANATFTCSLSNWSEDLMLNWNRLSPSNQTEKQAAFSNGLSQPVQDARFQIIQLPNRHDFHMNILDTRRNDSGIYLCGAIS 94 (117)
T ss_dssp CCEEEEEEESSCCTTCEEEEEEECTTCCEEEEEEEETTEEEESSCTTEEEEECTTSSEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCEEEEeEeecCCCCCEEEEEEeCCCCCceEEEEECCCCccccccCcEEEEEcCCCCEEEEEECcCCHHHCEEEEEEEEe
Confidence 4678888876543 57899999632 1 1 1111 11 12234678887653 35678999999999999999999865
Q ss_pred C
Q psy16425 75 D 75 (163)
Q Consensus 75 ~ 75 (163)
.
T Consensus 95 ~ 95 (117)
T 3bp6_A 95 L 95 (117)
T ss_dssp C
T ss_pred c
Confidence 4
No 459
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=98.65 E-value=1.6e-07 Score=61.58 Aligned_cols=64 Identities=9% Similarity=0.115 Sum_probs=39.8
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD 75 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 75 (163)
.++.|.|...+. .+.+.|++ ++..+..... ++.....+.....|.|.+++.+|+|.|+|.+.+.
T Consensus 116 ~~v~L~C~~~~~-~~~v~W~k-~g~~~~~~~~-------~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 179 (198)
T 1ugn_A 116 GNVTLQCDSQVA-FDGFILCK-EGEDEHPQCL-------NSQPHARGSSRAIFSVGPVSPSRRWWYRCYAYDS 179 (198)
T ss_dssp CCEEEEEECSSC-CSEEEEEE-C------CEE-------EC------CCEEEEEECCCCTTSCEEEEEEEECT
T ss_pred CcEEEEEecCCC-CcEEEEEE-CCCccCCccc-------cccccCCCcceeEEEecccCcccCeEEEEEEEeC
Confidence 467888988877 78999999 4544321110 0111111112348999999999999999999765
No 460
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=98.64 E-value=2.9e-08 Score=65.89 Aligned_cols=61 Identities=16% Similarity=0.389 Sum_probs=41.5
Q ss_pred eeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEccc-CCCCCeEEEEEEEeCCC
Q psy16425 4 RMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREV-RESDRGWYMCQVNTDPM 77 (163)
Q Consensus 4 ~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v-~~~d~G~Y~C~~~~~~~ 77 (163)
.+.|.|. +.|.+.|.|++ ++..+... .....+. ...+ +|.|.++ +.+|+|.|+|.+.|...
T Consensus 130 ~v~L~C~--g~p~p~i~W~k-~~~~l~~~-----~~~~~~~-~~~~----~L~I~~v~~~~D~G~Y~C~A~N~~g 191 (204)
T 1sy6_A 130 TVILTCP--QYPGSEILWQH-NDKNIGGD-----EDDKNIG-SDED----HLSLKEFSELEQSGYYVCYPRGSKP 191 (204)
T ss_dssp EEEEECS--CCCSSCEEEEE-TTEEESCC-----TTCTTEE-EETT----EEEETTCCHHHHCEEEEEEETTSCG
T ss_pred cEEEEcC--CCCCCceEEEE-CCEECCCc-----cCCceEe-cCCC----EEEEeeCCccccCEEEEEEeccCCC
Confidence 5778887 67888999999 55544211 0011121 1222 8999999 99999999999977643
No 461
>2jju_A Signal regulatory protein beta-1; immunoglobulin domain, immunoglobulin superfamily, immune system, transmembrane, paired receptor; 1.19A {Homo sapiens} PDB: 2jjv_A 2uv3_A* 2jjt_A* 2jjs_A* 2jjw_A
Probab=98.64 E-value=8e-08 Score=58.95 Aligned_cols=70 Identities=13% Similarity=0.252 Sum_probs=44.1
Q ss_pred ceeEEEeeeecc-CCCEEEEEEcCCce---EEeeeeeEEecCCeEEEEeC----CCceEEEEEcccCCCCCeEEEEEEEe
Q psy16425 3 ARMLIEIGEMLM-AESTVAWLRVDTQT---ILTIQTHVITKNHRIGVTHS----ETKAWYLHIREVRESDRGWYMCQVNT 74 (163)
Q Consensus 3 ~~~~~~~~~~~~-~~~~i~W~k~~~~~---~~~~~~~~~~~~~r~~~~~~----~~~~~~L~i~~v~~~d~G~Y~C~~~~ 74 (163)
.++.|.|...+. +.+.|.||+..+.. +..... ....|+..... ....++|.|.+++.+|+|.|.|.+.+
T Consensus 19 ~~vtL~C~~~~~~~~~~v~W~r~~~~~~~li~~~~~---~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 95 (127)
T 2jju_A 19 ESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKE---GHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFR 95 (127)
T ss_dssp SCEEECCEESCCCSCCCEEEEECSSTTCEEEEESSS---SCCTTEEEC-------CCBCCEEECSCCGGGCEEEEEEEEE
T ss_pred CCEEEEEEEeCCCCCCEEEEEecCCCCcEEEEECCC---CccCcEEeeEeeeecCCCEEEEEECCCCHHHCEEEEEEEEc
Confidence 468888887654 56789999965321 111100 01134443211 12356899999999999999999965
Q ss_pred C
Q psy16425 75 D 75 (163)
Q Consensus 75 ~ 75 (163)
.
T Consensus 96 ~ 96 (127)
T 2jju_A 96 K 96 (127)
T ss_dssp C
T ss_pred C
Confidence 4
No 462
>1tvd_A T cell receptor, ES204 V delta; immunoreceptor, TCR, delta chain, variable domain; 1.90A {Homo sapiens} SCOP: b.1.1.1
Probab=98.64 E-value=1.8e-07 Score=56.41 Aligned_cols=72 Identities=19% Similarity=0.325 Sum_probs=48.1
Q ss_pred ceeEEEeeeecc-CCCEEEEEEcCC-ce---EEee-eeeEE---ecCCeEEEEeC-CCceEEEEEcccCCCCCeEEEEEE
Q psy16425 3 ARMLIEIGEMLM-AESTVAWLRVDT-QT---ILTI-QTHVI---TKNHRIGVTHS-ETKAWYLHIREVRESDRGWYMCQV 72 (163)
Q Consensus 3 ~~~~~~~~~~~~-~~~~i~W~k~~~-~~---~~~~-~~~~~---~~~~r~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~~ 72 (163)
.++.|.|..... +...|.||+... .. +... ..... ...+|+.+..+ ..++++|.|.+++.+|+|.|.|.+
T Consensus 16 ~~vtL~C~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~ 95 (116)
T 1tvd_A 16 SEVVLLCTYDTVYSNPDLFWYRIRPDYSFQFVFYGDDSRSEGADFTQGRFSVKHILTQKAFHLVISPVRTEDSATYYCAF 95 (116)
T ss_dssp CCEEECCEEECCSSSCCEEEEEECTTSCEEEEEEECSSCEEECGGGTTTEEEEEEGGGTEEEEEESSCCGGGCEEEEEEE
T ss_pred CeEEEEeEeEcCCCCcEEEEEEeCCCCCcEEEEEECCcccccCcccCCCEEEEEecCCCEEEEEEccCChHHCEEEEEEE
Confidence 468888886544 567899998642 11 1111 11111 12577877653 346789999999999999999999
Q ss_pred Ee
Q psy16425 73 NT 74 (163)
Q Consensus 73 ~~ 74 (163)
.+
T Consensus 96 ~~ 97 (116)
T 1tvd_A 96 TL 97 (116)
T ss_dssp EC
T ss_pred eC
Confidence 65
No 463
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=98.64 E-value=2.2e-07 Score=59.81 Aligned_cols=67 Identities=15% Similarity=0.223 Sum_probs=45.6
Q ss_pred ceeEEEeeeeccCC-CEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCC--ce
Q psy16425 3 ARMLIEIGEMLMAE-STVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPM--KS 79 (163)
Q Consensus 3 ~~~~~~~~~~~~~~-~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~--~~ 79 (163)
..+.|.|...+.++ +.+.|++ ++..+... ... ..|.|.+++.+|+|.|+|.+.|... .+
T Consensus 104 ~~~~l~C~~~~~~~~~~~~W~k-~g~~~~~~-------------~~~----~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s 165 (175)
T 1fnl_A 104 DPIHLRCHSWKNTALHKVTYLQ-NGKDRKYF-------------HHN----SDFHIPKATLKDSGSYFCRGLVGSKNVSS 165 (175)
T ss_dssp CCEEEEEEECTTCCCEEEEEEE-TTEEEEEE-------------EEC----CCEEESSCCGGGCEEEEEEEEETTEEEEC
T ss_pred CCEEEEEEcCCCCCceEEEEEE-CCeEccCC-------------CCC----CEEEEcccChhhCeEEEEEEEcCCCCccC
Confidence 35788888776655 5999999 55554211 011 2799999999999999999987532 23
Q ss_pred EeEEEEEE
Q psy16425 80 QVGYLEVV 87 (163)
Q Consensus 80 ~~~~l~v~ 87 (163)
..+.|.|.
T Consensus 166 ~~~~l~V~ 173 (175)
T 1fnl_A 166 ETVNITIT 173 (175)
T ss_dssp CCEEEEEE
T ss_pred ccEEEEEe
Confidence 34445544
No 464
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.64 E-value=7.2e-08 Score=58.22 Aligned_cols=57 Identities=16% Similarity=0.327 Sum_probs=46.0
Q ss_pred CcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceE----EeceEEEEcchhhhHh
Q psy16425 99 TDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQE----DFPFFKRTKKKKKKKK 156 (163)
Q Consensus 99 ~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~----~~~~l~i~~v~~~~~~ 156 (163)
....+.+|+.+.|.|.+.|.|.|.+.|++++..+.. .+... ....|.|.+++.+|.+
T Consensus 32 ~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~~-~~~~~~~~~~~~~L~i~~~~~~D~G 92 (118)
T 2e7c_A 32 QTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLDT-SRVHVRTSDFDTVFFVRQAARSDSG 92 (118)
T ss_dssp SCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCC-SSCEEEECSSEEEEEESSCCTTTCE
T ss_pred CCEEEECCCEEEEEEEEccCCCCEEEEEECCEECCC-CcEEEEECCCeEEEEECCCChhcCE
Confidence 467788999999999999999999999999988752 22222 2355999999999876
No 465
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=98.64 E-value=4.1e-07 Score=60.12 Aligned_cols=63 Identities=8% Similarity=0.044 Sum_probs=41.7
Q ss_pred EEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC
Q psy16425 6 LIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD 75 (163)
Q Consensus 6 ~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 75 (163)
++.|...+.|++.+.|++. +..............+.+... ..|.|.++..+|+|.|+|.+.|.
T Consensus 141 ~~c~~~~~~P~~~~~w~~~-~~~~~~~~~~~~~~~~~~~~~------s~L~i~~~~~~d~g~YtC~a~N~ 203 (225)
T 4fmk_A 141 ARCVSTGGRPPARITWISS-LGGEAKDTQEPGIQAGTVTII------SRYSLVPVGRADGVKVTCRVEHE 203 (225)
T ss_dssp EEEEEEEEBSCCEEEEECS-SCCEEEEEEEECSSTTCEEEE------EEEEECCCGGGTTCEEEEEEECT
T ss_pred eeeeecCCCCCCEEEEEEC-CccccCCcceEEecCCCEEEE------EEEEEeeCCHHHCCEEEEEEEcC
Confidence 4445566788899999984 433333222222333333322 26999999999999999999876
No 466
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.63 E-value=8.3e-08 Score=56.84 Aligned_cols=66 Identities=8% Similarity=0.144 Sum_probs=49.6
Q ss_pred CCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEec-CCceE-Eec---eEEEEcchhhhHh
Q psy16425 89 PPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQ-GNGQE-DFP---FFKRTKKKKKKKK 156 (163)
Q Consensus 89 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~-~~~~~-~~~---~l~i~~v~~~~~~ 156 (163)
+|.+...+. ....+.+|+++.|.|.+ +.|.|.+.|++++..+... .+... ..+ .|.|.+++.+|++
T Consensus 15 ~p~f~~~~~-~~~~v~~G~~v~L~C~~-~~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 85 (104)
T 1pd6_A 15 STAFQKKLE-PAYQVSKGHKIRLTVEL-ADHDAEVKWLKNGQEIQMSGSKYIFESIGAKRTLTISQCSLADDA 85 (104)
T ss_dssp TSSCSEECC-SEEEEETTSCEEEEEEC-SSSSSCCEEEESSSEECCCSSSSEEEEETTEEEEEECSCSSSSCE
T ss_pred CCEEEEcCC-CcEEEecCCCEEEEEEE-cCCCCEEEEEECCEECCCCCCeEEEEecCCEEEEEECCCCcccCE
Confidence 444444332 24778999999999999 7899999999999988665 34332 234 8999999998875
No 467
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=98.63 E-value=8.8e-08 Score=64.14 Aligned_cols=75 Identities=11% Similarity=0.155 Sum_probs=41.5
Q ss_pred eeEEEeeeec-cCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceE-EEEEcccCCCCCeEEEEEEEeC-CCceE
Q psy16425 4 RMLIEIGEML-MAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAW-YLHIREVRESDRGWYMCQVNTD-PMKSQ 80 (163)
Q Consensus 4 ~~~~~~~~~~-~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~-~L~i~~v~~~d~G~Y~C~~~~~-~~~~~ 80 (163)
.+.+.|...+ .|.|.|.|++.++..+...... ......+.+ .+.+.+++.+|+|.|+|.+.|. +....
T Consensus 135 ~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~~~---------~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~ 205 (226)
T 4f80_A 135 GIHLECRSTGWYPQPQIQWSNNKGENIPTVEAP---------VVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEK 205 (226)
T ss_dssp EEEEEEEEEEEBSCCEEEEECTTSCBCCCEECC---------CEECTTSCEEEEEEEEECC----CEEEEEEETTTTEEE
T ss_pred ceeeEEEeccCCCCCEEEEEECCceEcCCCceE---------EEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEE
Confidence 5677788776 5999999999655544221111 111111111 2345567889999999999876 44444
Q ss_pred eEEEEEE
Q psy16425 81 VGYLEVV 87 (163)
Q Consensus 81 ~~~l~v~ 87 (163)
.+.|.|.
T Consensus 206 ~~~v~v~ 212 (226)
T 4f80_A 206 TASISIA 212 (226)
T ss_dssp EEEECCC
T ss_pred EEEEEEC
Confidence 4445443
No 468
>3bia_X T-cell immunoglobulin and mucin domain- containing protein 4; beta barrel, immunoglobulin fold, IGV domain, TIM, glycoprotein; HET: TLA; 2.20A {Mus musculus} PDB: 3bi9_X* 3bib_X*
Probab=98.63 E-value=5.7e-07 Score=54.13 Aligned_cols=73 Identities=15% Similarity=0.263 Sum_probs=46.9
Q ss_pred ceeEEEeeee--ccCCCEEEEEEcC-Cc-----eEE-eeee-eEEecCCeEEEEeC-CCceEEEEEcccCCCCCeEEEEE
Q psy16425 3 ARMLIEIGEM--LMAESTVAWLRVD-TQ-----TIL-TIQT-HVITKNHRIGVTHS-ETKAWYLHIREVRESDRGWYMCQ 71 (163)
Q Consensus 3 ~~~~~~~~~~--~~~~~~i~W~k~~-~~-----~~~-~~~~-~~~~~~~r~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~ 71 (163)
..+.|.|... ......+.||+.. .. .+. ..+. ......+|+.+... ..++++|.|.+++.+|+|.|.|.
T Consensus 12 ~~vtL~C~~~~~~~~~~~v~W~r~~~~~~~~~~~l~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~Dsg~Y~C~ 91 (116)
T 3bia_X 12 QPVTLPCHYLSWSQSRNSMCWGKGSCPNSKCNAELLRTDGTRIISRKSTKYTLLGKVQFGEVSLTISNTNRGDSGVYCCR 91 (116)
T ss_dssp SCEEECCBCTTCCTTTCEEEEEESSCCSSSCTTEEEEECSSSEEEESSTTEEECSCGGGTBCCEEECSCCGGGCEEEEEE
T ss_pred CcEEEEEEeeCCCCCeEEEEEeeecCCCCCCceEEEEECCcccccccCceEEEeccCCCCEEEEEEccCChhHCEEEEEE
Confidence 4678888765 2234569999965 11 122 1111 12233456665543 24678999999999999999999
Q ss_pred EEeC
Q psy16425 72 VNTD 75 (163)
Q Consensus 72 ~~~~ 75 (163)
+...
T Consensus 92 v~~~ 95 (116)
T 3bia_X 92 IEVP 95 (116)
T ss_dssp EECS
T ss_pred EEcC
Confidence 9654
No 469
>2xt1_B Camelid VHH 9; viral protein-immune system complex; 1.32A {Vicugna pacos} PDB: 2xv6_B 2xxc_B 2xxm_B
Probab=98.63 E-value=8.1e-07 Score=53.99 Aligned_cols=71 Identities=17% Similarity=0.371 Sum_probs=47.8
Q ss_pred ceeEEEeeeecc--CCCEEEEEEcCC-c-e--EEeeee------eEEecCCeEEEEeCC-CceEEEEEcccCCCCCeEEE
Q psy16425 3 ARMLIEIGEMLM--AESTVAWLRVDT-Q-T--ILTIQT------HVITKNHRIGVTHSE-TKAWYLHIREVRESDRGWYM 69 (163)
Q Consensus 3 ~~~~~~~~~~~~--~~~~i~W~k~~~-~-~--~~~~~~------~~~~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~ 69 (163)
..+.|.|...+. ....|.||+... . + +..... ......+|+.+..+. .++++|.|.+++++|+|.|.
T Consensus 18 ~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~ 97 (121)
T 2xt1_B 18 GSLRLSCAASGSFFMSNVMAWYRQAPGKARELIAAIRGGDMSTVYDDSVKGRFTITRDDDKNILYLQMNDLKPEDTAMYY 97 (121)
T ss_dssp CCEEEEEEEESSSCCCSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEE
T ss_pred CCEEEEEEecCeeccCceEEEEEECCCCCcEEEEEEecCCCcceeCcccCCeEEEEEeCCCCEEEEEECCCCHHHCEEEE
Confidence 468888887643 367899999641 1 1 211110 011235688877653 46789999999999999999
Q ss_pred EEEE
Q psy16425 70 CQVN 73 (163)
Q Consensus 70 C~~~ 73 (163)
|.+.
T Consensus 98 C~~~ 101 (121)
T 2xt1_B 98 CKAS 101 (121)
T ss_dssp EEET
T ss_pred EEEE
Confidence 9984
No 470
>1fo0_A Protein (BM3.3 T cell receptor alpha-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_A*
Probab=98.63 E-value=2.6e-07 Score=55.66 Aligned_cols=72 Identities=8% Similarity=0.140 Sum_probs=48.0
Q ss_pred ceeEEEeeeecc-CCCEEEEEEcCC-ce---EEeee--eeEEecCCeEEEEe-CCCceEEEEEcccCCCCCeEEEEEEEe
Q psy16425 3 ARMLIEIGEMLM-AESTVAWLRVDT-QT---ILTIQ--THVITKNHRIGVTH-SETKAWYLHIREVRESDRGWYMCQVNT 74 (163)
Q Consensus 3 ~~~~~~~~~~~~-~~~~i~W~k~~~-~~---~~~~~--~~~~~~~~r~~~~~-~~~~~~~L~i~~v~~~d~G~Y~C~~~~ 74 (163)
..+.|.|..... +...+.||+... .. +.... .......+|+.+.. ...++++|.|.+++++|+|.|.|.+.+
T Consensus 16 ~~vtL~C~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~ 95 (116)
T 1fo0_A 16 TTVTMDCVYETQDSSYFLFWYKQTASGEIVFLIRQDSYKKENATVGHYSLNFQKPKSSIGLIITATQIEDSAVYFCAMRG 95 (116)
T ss_dssp CCEEECCEECCCCSSCEEEEEEECTTCCEEEEEEEETTCCSCCEETTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred CcEEEEeEecCCCCCeEEEEEEeCCCCCeEEEEEEccCCcCcccCCcEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEc
Confidence 468888887666 566899999642 21 11111 11111246777753 334678999999999999999999964
No 471
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.63 E-value=2.6e-08 Score=59.34 Aligned_cols=66 Identities=20% Similarity=0.470 Sum_probs=50.5
Q ss_pred CCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceE-----EeceEEEEcchhhhHh
Q psy16425 89 PPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQE-----DFPFFKRTKKKKKKKK 156 (163)
Q Consensus 89 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~-----~~~~l~i~~v~~~~~~ 156 (163)
+|.+...+ ....+.+|+.+.|.|.+.+.|.|.+.|++++..+........ ....|.|.+++.+|.+
T Consensus 9 ~P~i~~~~--~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G 79 (110)
T 2dm3_A 9 RPHFLQAP--GDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAG 79 (110)
T ss_dssp CCEEEECC--CEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCS
T ss_pred CCcEEeCC--CcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCE
Confidence 45555433 367788999999999999999999999999987755443322 1247999999999876
No 472
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=98.62 E-value=4.4e-09 Score=64.07 Aligned_cols=73 Identities=21% Similarity=0.310 Sum_probs=54.9
Q ss_pred EeEEEEEEcCCcccccCCCCcEEEeCCCcEEEEeEeccCCCCe-EEEEECCeEEEe--cCCceE----E----eceEEEE
Q psy16425 80 QVGYLEVVVPPDILDYPTSTDMVIREGSNVTLKCAASGSPKPN-ITWRREGGELIA--QGNGQE----D----FPFFKRT 148 (163)
Q Consensus 80 ~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~-v~W~~~~~~~~~--~~~~~~----~----~~~l~i~ 148 (163)
..+.|.|..+|.+.. + ....+.+|+.+.|.|.+.|.|.|. +.|++++..+.. ..+... . ...|.|.
T Consensus 5 ~~~~l~V~~~P~i~~-~--~~~~~~~G~~v~l~C~~~g~P~p~~i~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~I~ 81 (122)
T 2cry_A 5 SSGTLTVNGPPIISS-T--QTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTIS 81 (122)
T ss_dssp CCCCCCCCSSCCEEE-E--CCCCCCTTSCCCCCEEECCSSCCSEEEEESSSCEECSEEETTEEEEEEEETTEEEEEEECT
T ss_pred eEEEEEEecCCCccC-C--CeEEEecCCCEEEEEEEeecCCCcEeEEEECCEEccCCCCCCEEEEEecCCCceEEEEEEc
Confidence 344567777887766 3 355688999999999999999997 999999988753 222222 1 3479999
Q ss_pred cchhhhH
Q psy16425 149 KKKKKKK 155 (163)
Q Consensus 149 ~v~~~~~ 155 (163)
+++.+|.
T Consensus 82 ~v~~~D~ 88 (122)
T 2cry_A 82 NIVRADF 88 (122)
T ss_dssp TCCHHHH
T ss_pred CCChhhC
Confidence 9999987
No 473
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=98.62 E-value=4.6e-07 Score=60.19 Aligned_cols=79 Identities=11% Similarity=0.167 Sum_probs=47.4
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEe--cCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCce
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVIT--KNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKS 79 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~--~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~ 79 (163)
..+.|.|...+.|.|.|.|++.++..+......... ..+.+. ...+..++..|+|.|+|.+.|. +...
T Consensus 132 ~~v~L~C~~~g~P~p~i~W~~~~g~~~~~~~~~~~~~~~~~~~~---------~~~~l~v~~~d~g~Y~C~a~n~~g~~~ 202 (222)
T 3sbw_C 132 SEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLFN---------VTSTLRINTTTNEIFYCTFRRLDPEEN 202 (222)
T ss_dssp TEEEEEEEEEEBSCCEEEEEETTCCEECCEEEEEECC----CEE---------EEEEEEEECCTTCEEEEEEEETTTTEE
T ss_pred CcEEEEEEecCCCCCeEEEEECCCceecCccceEEEcCCCCCEE---------EEEEEEEeccCCcEEEEEEEeCcccee
Confidence 468889999999999999999545544221111011 111111 1222345679999999999876 4455
Q ss_pred EeEEEEEEcCC
Q psy16425 80 QVGYLEVVVPP 90 (163)
Q Consensus 80 ~~~~l~v~~~p 90 (163)
..+.|.|...|
T Consensus 203 ~~~~l~v~~~p 213 (222)
T 3sbw_C 203 HTAELVIPELP 213 (222)
T ss_dssp EEEEEECCCC-
T ss_pred eEEEEEecCCc
Confidence 55666665544
No 474
>2coq_A NEW antigen receptor variable domain; IG VNAR, natural TYPE2, immune system; 2.10A {Orectolobus maculatus}
Probab=98.62 E-value=1.9e-07 Score=55.60 Aligned_cols=68 Identities=24% Similarity=0.293 Sum_probs=46.1
Q ss_pred ceeEEEeeeecc--CCCEEEEEEcC-CceEEeeeeeEEecCCeEEEEe-CCCceEEEEEcccCCCCCeEEEEEEEe
Q psy16425 3 ARMLIEIGEMLM--AESTVAWLRVD-TQTILTIQTHVITKNHRIGVTH-SETKAWYLHIREVRESDRGWYMCQVNT 74 (163)
Q Consensus 3 ~~~~~~~~~~~~--~~~~i~W~k~~-~~~~~~~~~~~~~~~~r~~~~~-~~~~~~~L~i~~v~~~d~G~Y~C~~~~ 74 (163)
..+.|.|...+. +.+.|.||+.. +.... ......+|+.... .....++|.|.+++++|+|.|.|.+.+
T Consensus 16 ~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~ 87 (108)
T 2coq_A 16 ESLTINCVLRDTACALDSTNWYRTKLGSTKE----QTISIGGRYSETVDEGSNSASLTIRDLRVEDSGTYKCKAYR 87 (108)
T ss_dssp CCEEEEEEECCSSEEEEEEEEEEEETTCCCE----EECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCEEEEeEeCCCcCCCCEEEEEEcCCCCCcE----EEEEeCCceEEEEcCCCCEEEEEECCCCcccCEEEEEEEEe
Confidence 467888887654 36789999953 22110 0112345666543 234678999999999999999999965
No 475
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=98.62 E-value=2.5e-07 Score=61.69 Aligned_cols=84 Identities=18% Similarity=0.232 Sum_probs=53.4
Q ss_pred ceeEEEeeeeccCCCEEEEEEc---CCceEEeeeeeEEecCCeEEEEe----CCCceEEEEEcccCCCCCeEEEEEEEeC
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRV---DTQTILTIQTHVITKNHRIGVTH----SETKAWYLHIREVRESDRGWYMCQVNTD 75 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~---~~~~~~~~~~~~~~~~~r~~~~~----~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 75 (163)
..+.|.|...+.|.+.+.|++. ++..+.... ........ ......+|.|.+++.+|+|.|+|.+.|.
T Consensus 134 ~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~------~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 207 (231)
T 3ojm_B 134 GDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDG------LPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNY 207 (231)
T ss_dssp CCEEEECCEECSSCCEEEEEEECCBTTBSBCTTS------CBCEEEEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEET
T ss_pred CcEEEEEEEecCCCCEEEEEECCCCCCccccCCC------cceEeEecccccccCCccEEEEecCCHHHCeEEEEEEEec
Confidence 3578889999999999999993 233221100 00111110 0112347999999999999999999776
Q ss_pred -CCceEeEEEEEEcCCcc
Q psy16425 76 -PMKSQVGYLEVVVPPDI 92 (163)
Q Consensus 76 -~~~~~~~~l~v~~~p~~ 92 (163)
+.....+.|.|..+|..
T Consensus 208 ~g~~~~~~~l~V~~~p~~ 225 (231)
T 3ojm_B 208 IGQANQSAWLTVLPKQQA 225 (231)
T ss_dssp TEEEEEEEEEEEECCC--
T ss_pred cceEeeEEEEEEecCCCC
Confidence 44456667777776644
No 476
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=98.61 E-value=2.6e-07 Score=70.43 Aligned_cols=73 Identities=16% Similarity=0.300 Sum_probs=54.2
Q ss_pred eeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC-CCceEeE
Q psy16425 4 RMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD-PMKSQVG 82 (163)
Q Consensus 4 ~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~~~~~~ 82 (163)
.+.+.|...+.|.|.|.|++ ++..+ ....++.....+ .+.+|.|.++...|+|.|+|.+.|. |..+..+
T Consensus 499 ~~~~~~~v~g~P~P~v~W~k-~~~el--------~~s~~~~i~~~~-~~~~L~I~~~~~~D~G~Yt~~A~N~~G~~~~~v 568 (573)
T 3uto_A 499 SANFYCRVIASSPPVVTWHK-DDREL--------KQSVKYMKRYNG-NDYGLTINRVKGDDKGEYTVRAKNSYGTKEEIV 568 (573)
T ss_dssp CEEEEEEEECSSCCEEEEEE-TTEEC--------CSSSSEEEEEET-TEEEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred cEEEEEEEEccCCCeEEEEE-CCEEc--------ccCCcEEEEEcC-CEEEEEEcCCCcccCcEEEEEEEeCCCcEEEEE
Confidence 56788888999999999999 55554 334555555443 4568999999999999999999776 4444545
Q ss_pred EEEE
Q psy16425 83 YLEV 86 (163)
Q Consensus 83 ~l~v 86 (163)
.|.|
T Consensus 569 ~l~V 572 (573)
T 3uto_A 569 FLNV 572 (573)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5544
No 477
>3t0v_A Immunoglobulin variable lambda domain; immunoglobulin fold, fluorogen activation, dimethylindole RE binding protein; HET: 1PE PE3; 1.45A {Homo sapiens} PDB: 3t0w_A* 3t0x_A* 3lrg_A 3lrh_A 2rhe_A
Probab=98.61 E-value=2.4e-07 Score=56.60 Aligned_cols=72 Identities=17% Similarity=0.190 Sum_probs=47.5
Q ss_pred ceeEEEeeeeccC--CCEEEEEEcC-Cce---EEeee-eeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC
Q psy16425 3 ARMLIEIGEMLMA--ESTVAWLRVD-TQT---ILTIQ-THVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD 75 (163)
Q Consensus 3 ~~~~~~~~~~~~~--~~~i~W~k~~-~~~---~~~~~-~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 75 (163)
..+.|.|.....+ ...+.||+.. +.. +.... .......+|+.... ...+++|.|.+++.+|+|.|.|.+.+.
T Consensus 16 ~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~-~~~~~sL~I~~l~~~DsG~Y~C~~~~~ 94 (123)
T 3t0v_A 16 QKVTIFCSGSSSNVEDNSVYWYQQFPGTTPKVLIYNDDRRSSGVPDRFSGSK-SGTSASLAISGLRSEDEADYYCLSWDD 94 (123)
T ss_dssp CCEEEEEECCTTTTTTSCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ETTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCEEEEEecCCCccCCCeEEEEEECCCCCCEEEEEECCcCCCCCcCCEEEEc-cCCEEEEEECCCCHHHCEEEEEEEEcC
Confidence 4678888876543 4789999963 111 11111 11111246777664 346789999999999999999999654
No 478
>2oi9_C V beta, T cell receptor beta chain; TCR, MHC, immune system; 2.35A {Mus musculus} PDB: 2e7l_C
Probab=98.61 E-value=4.5e-07 Score=55.16 Aligned_cols=72 Identities=13% Similarity=0.213 Sum_probs=48.2
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCC-c---eEEeeeee----EEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDT-Q---TILTIQTH----VITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNT 74 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~-~---~~~~~~~~----~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~ 74 (163)
..+.|.|.. ......|.||+... . .+...... .....+|+.+.....++++|.|.+++++|+|.|.|.+.+
T Consensus 17 ~~vtL~C~~-~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~ 95 (121)
T 2oi9_C 17 EKVTLSCNQ-TNNHNNMYWYRQDTGHELRLIYYSYGAGSTEKGDIPDGYKASRPSQENFSLTLESATPSQTSVYFCASGG 95 (121)
T ss_dssp CCEEEEEEE-SSCCSEEEEEEESSSSCCEEEEEESSTTCCEECSSCTTEEEECCSSSEEEEEESSCCGGGCEEEEEEEES
T ss_pred CcEEEEEEe-cCCCCeEEEEEECCCCCcEEEEEECCCceeeCCccCCCeEEEcCCCCEEEEEECCCCHHHCEEEEEEEcc
Confidence 467888874 34567899999642 1 12111110 112256888776445678999999999999999999954
Q ss_pred C
Q psy16425 75 D 75 (163)
Q Consensus 75 ~ 75 (163)
.
T Consensus 96 ~ 96 (121)
T 2oi9_C 96 G 96 (121)
T ss_dssp S
T ss_pred C
Confidence 3
No 479
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=98.61 E-value=9.2e-09 Score=61.19 Aligned_cols=66 Identities=26% Similarity=0.486 Sum_probs=50.4
Q ss_pred CCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceE----EeceEEEEcchhhhHh
Q psy16425 89 PPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQE----DFPFFKRTKKKKKKKK 156 (163)
Q Consensus 89 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~----~~~~l~i~~v~~~~~~ 156 (163)
.|.+...+ ....+.+|+++.|.|.+.|.|.|.+.|++++..+....+... ....|.|.+++.+|.+
T Consensus 14 ~~~i~~~p--~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G 83 (106)
T 1nct_A 14 AARILTKP--RSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEG 83 (106)
T ss_dssp CCEEEECC--CCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTTCSSEEEEECSSEEEEEECCCCSSCCS
T ss_pred CCEEEECC--CCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCEEEEEECcCCchhCE
Confidence 34444433 367788999999999999999999999999887654444332 2468999999998875
No 480
>2otu_A FV light chain variable domain; antibody FV polyglutamine complex, immune system; 1.68A {Mus musculus} PDB: 2otw_A 2gsg_A
Probab=98.60 E-value=4.6e-07 Score=54.52 Aligned_cols=72 Identities=17% Similarity=0.340 Sum_probs=48.2
Q ss_pred ceeEEEeeeecc-CCCEEEEEEcCC--ce--EEeeee---eEEe--cCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEE
Q psy16425 3 ARMLIEIGEMLM-AESTVAWLRVDT--QT--ILTIQT---HVIT--KNHRIGVTHSETKAWYLHIREVRESDRGWYMCQV 72 (163)
Q Consensus 3 ~~~~~~~~~~~~-~~~~i~W~k~~~--~~--~~~~~~---~~~~--~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~ 72 (163)
..+.|.|..... +...+.||+... .+ +..... .... ..+|+.... ..++++|.|.+++++|+|.|.|.+
T Consensus 17 ~~v~L~C~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~-~~~~~~L~I~~~~~~Dsg~Y~C~~ 95 (115)
T 2otu_A 17 ASAKLTCTLSSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSS-SGADRYLSISNIQPEDEAIYICGV 95 (115)
T ss_dssp CCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECTTCCTTEEEEE-ETTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCEEEEEEecCCCCCeEEEEEEeCCCCCceEEEEEecCCceecCcccCCCEEEEc-cCCEEEEEECCCChhHCEEEEEEE
Confidence 468888887654 567899998631 11 211110 1111 246777765 346789999999999999999999
Q ss_pred EeC
Q psy16425 73 NTD 75 (163)
Q Consensus 73 ~~~ 75 (163)
.+.
T Consensus 96 ~~~ 98 (115)
T 2otu_A 96 GDT 98 (115)
T ss_dssp EEC
T ss_pred ecC
Confidence 654
No 481
>2pnd_A V-SET and immunoglobulin domain containing 4; complement receptor, IG-like domain, immune system; 1.00A {Mus musculus} PDB: 2icc_A 2ice_S* 2icf_S*
Probab=98.59 E-value=3.9e-07 Score=55.17 Aligned_cols=73 Identities=21% Similarity=0.253 Sum_probs=46.8
Q ss_pred cceeEEEeeeeccCC---CEEEEEEcCCc-e--EEee--eeeE---EecCCeEEEEeCCCceEEEEEcccCCCCCeEEEE
Q psy16425 2 AARMLIEIGEMLMAE---STVAWLRVDTQ-T--ILTI--QTHV---ITKNHRIGVTHSETKAWYLHIREVRESDRGWYMC 70 (163)
Q Consensus 2 ~~~~~~~~~~~~~~~---~~i~W~k~~~~-~--~~~~--~~~~---~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 70 (163)
..++.|.|....... ..|.||+..+. . +... +... ....+|+.+.....++++|.|.+++.+|+|.|.|
T Consensus 16 G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~i~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G~Y~C 95 (119)
T 2pnd_A 16 KGDVKIQCIYDPLRGYRQVLVKWLVRHGSDSVTIFLRDSTGDHIQQAKYRGRLKVSHKVPGDVSLQINTLQMDDRNHYTC 95 (119)
T ss_dssp TSCEEECCBCCCCTTCEEEEEEEEEEETTEEEEEEEEETTEEECCSGGGTTTEEECCSSTTBCCEEESSCCGGGCEEEEE
T ss_pred CCcEEEEEEEcCCCCCCceEEEEEEeCCCCceEEEEEcCCCceeecccccCcEEEccCCCCCEEEEEccCCcccCEEEEE
Confidence 346888887654322 25799985322 1 1111 1111 1134677776555577899999999999999999
Q ss_pred EEEe
Q psy16425 71 QVNT 74 (163)
Q Consensus 71 ~~~~ 74 (163)
.+..
T Consensus 96 ~v~~ 99 (119)
T 2pnd_A 96 EVTW 99 (119)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9954
No 482
>1sq2_N Novel antigen receptor; immunoglobulin fold, protein-protein complex, hydrolase/immune system complex; 1.45A {Ginglymostoma cirratum} SCOP: b.1.1.1 PDB: 1t6v_N
Probab=98.59 E-value=1.8e-07 Score=56.21 Aligned_cols=68 Identities=21% Similarity=0.276 Sum_probs=46.5
Q ss_pred ceeEEEeeeeccC--CCEEEEEEcC-CceEEeeeeeEEecCCeEEEEeC-CCceEEEEEcccCCCCCeEEEEEEEe
Q psy16425 3 ARMLIEIGEMLMA--ESTVAWLRVD-TQTILTIQTHVITKNHRIGVTHS-ETKAWYLHIREVRESDRGWYMCQVNT 74 (163)
Q Consensus 3 ~~~~~~~~~~~~~--~~~i~W~k~~-~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~~~~ 74 (163)
..+.|.|...+.+ .+.|.||+.. +.... ..+...+|+..... ....++|.|.+++++|+|.|.|.+.+
T Consensus 16 ~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~----~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~ 87 (113)
T 1sq2_N 16 ESLTINCVLRDASYALGSTCWYRKKSGEGNE----ESISKGGRYVETVNSGSKSFSLRINDLTVEDGGTYRCGLGV 87 (113)
T ss_dssp CCEEEEEEECSCSSCCCCEEEEEEETTSCCC----EECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECB
T ss_pred CCEEEEEEECCCcCCCCEEEEEEeCCCCCce----EeEEeCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEe
Confidence 4688888876554 5789999963 22111 01123456665433 34678999999999999999999965
No 483
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.59 E-value=1.2e-07 Score=55.76 Aligned_cols=65 Identities=20% Similarity=0.298 Sum_probs=49.4
Q ss_pred CCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceE-Eec---eEEEEcchhhhHh
Q psy16425 89 PPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQE-DFP---FFKRTKKKKKKKK 156 (163)
Q Consensus 89 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~-~~~---~l~i~~v~~~~~~ 156 (163)
+|.+...+ ....+.+|+++.|.|. .+.|.|.+.|++++..+....+... ..+ .|.|.+++.+|.+
T Consensus 8 pp~~~~~~--~~~~v~~G~~v~l~C~-~~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G 76 (103)
T 2dku_A 8 ANCFTEEL--TNLQVEEKGTAVFTCK-TEHPAATVTWRKGLLELRASGKHQPSQEGLTLRLTISALEKADSD 76 (103)
T ss_dssp CCCCSSCC--CCEEEETTSEEEEEEE-CSSCCSCCEEEESSCBCCSSSSEEEEEETTEEEEEEESCCTTTCS
T ss_pred CCEeEecC--CcEEEeCCCcEEEEEE-eCCCCCeEEEEeCCEECCCCCeEEEEeCCCEEEEEECCCCcccCE
Confidence 34444433 4678899999999999 4889999999999988765544443 233 7999999999876
No 484
>1kxv_C Camelid VHH domain CAB10; beta 8 alpha 8, beta barrel, hydrolase, immune system; 1.60A {Camelus dromedarius} SCOP: b.1.1.1
Probab=98.59 E-value=6.5e-07 Score=54.37 Aligned_cols=73 Identities=12% Similarity=0.314 Sum_probs=48.7
Q ss_pred ceeEEEeeeecc--CCCEEEEEEcCC-c-e--EEeeee---eEE--ecCCeEEEEeCC-CceEEEEEcccCCCCCeEEEE
Q psy16425 3 ARMLIEIGEMLM--AESTVAWLRVDT-Q-T--ILTIQT---HVI--TKNHRIGVTHSE-TKAWYLHIREVRESDRGWYMC 70 (163)
Q Consensus 3 ~~~~~~~~~~~~--~~~~i~W~k~~~-~-~--~~~~~~---~~~--~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C 70 (163)
..+.|.|...+. ....+.||+... . + +..... ... ...+|+.+..+. .++++|.|.+++++|+|.|.|
T Consensus 16 ~~vtL~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C 95 (121)
T 1kxv_C 16 GSLRLSCAASGNTLCTYDMSWYRRAPGKGRDFVSGIDNDGTTTYVDSVAGRFTISQGNAKNTAYLQMDSLKPDDTAMYYC 95 (121)
T ss_dssp CCEEEEEEEESCTTCCEEEEEEEECTTSCEEEEEEECTTCCEEECGGGBTTEEEEECSSTTEEEEEECSCCGGGCEEEEE
T ss_pred CcEEEEEEecCCCcCceEEEEEEeCCCCCCEEEEEEeCCCCeeeCcccCCcEEEEEECCCCEEEEEECCCCHHHCEEEEE
Confidence 468888887643 357899998631 1 1 111110 011 124688877653 467899999999999999999
Q ss_pred EEEeC
Q psy16425 71 QVNTD 75 (163)
Q Consensus 71 ~~~~~ 75 (163)
.+.+.
T Consensus 96 ~~~~~ 100 (121)
T 1kxv_C 96 KPSLR 100 (121)
T ss_dssp EEEES
T ss_pred EEEec
Confidence 99653
No 485
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=98.59 E-value=8.1e-08 Score=62.67 Aligned_cols=52 Identities=23% Similarity=0.429 Sum_probs=38.6
Q ss_pred eeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeC
Q psy16425 4 RMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTD 75 (163)
Q Consensus 4 ~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 75 (163)
.+.|.|.. |.|.|.|+| ++..+.. ..+ ....|.|.+++.+|+|.|+|.+.|.
T Consensus 124 ~v~l~C~~---p~p~i~W~k-~g~~i~~--------~~~--------~~~~L~i~~v~~~D~G~Y~C~a~N~ 175 (186)
T 1jbj_A 124 SVLLTCGL---TDKTIKWLK-DGSIISP--------LNA--------TKNTWNLGNNAKDPRGTYQCQGAKE 175 (186)
T ss_dssp EEEEECSS---SCSCEEEEE-TTEECCC--------SSC--------CSSCCEEEETTSCCEEEEEEEESSC
T ss_pred eEEEEeeC---CCCeEEEEE-CCEECcc--------cCC--------CcceEEECCCCcCcCEEEEEEEEcC
Confidence 57777876 788999999 5655421 010 1227999999999999999999665
No 486
>3moq_A NEW antigen receptor variable domain, P3(40) PEPT amyloid beta A4 protein; AB-ignar, AB-12Y-2, glycoprotein, membran protease inhibitor; 2.05A {Orectolobus maculatus} PDB: 2z8w_C 2z8v_C 1ves_A 1ver_A
Probab=98.58 E-value=2.4e-07 Score=56.85 Aligned_cols=69 Identities=23% Similarity=0.264 Sum_probs=46.8
Q ss_pred ceeEEEeeeecc--CCCEEEEEEcC-CceEEeeeeeEEecCCeEEEEeC-CCceEEEEEcccCCCCCeEEEEEEEeC
Q psy16425 3 ARMLIEIGEMLM--AESTVAWLRVD-TQTILTIQTHVITKNHRIGVTHS-ETKAWYLHIREVRESDRGWYMCQVNTD 75 (163)
Q Consensus 3 ~~~~~~~~~~~~--~~~~i~W~k~~-~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 75 (163)
..+.|.|...+. +.+.+.||+.. +... .......+|+..... ...+++|.|.+++++|+|.|.|.+.+.
T Consensus 16 ~svtL~C~~s~~~~~~~~v~Wyrq~~g~~~----~~li~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~ 88 (126)
T 3moq_A 16 ESLTINCVLRDASFELKDTGWYRTKLGSTN----EQSISIGGRYVETVNKGSKSFSLRISDLRVEDSGTYKCQAFYV 88 (126)
T ss_dssp CCEEEEEEEESCSSCCCEEEEEEEETTCCC----CEECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEEE
T ss_pred CCEEEEEEeecCccCCceEEEEEeCCCCCc----eEEEEeCCcEEEEEeCCCCEEEEEECcCChHhCEEEEEEEEEc
Confidence 467888887654 56789999952 1111 011123467765543 346789999999999999999999543
No 487
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.57 E-value=7.5e-08 Score=57.01 Aligned_cols=57 Identities=12% Similarity=0.233 Sum_probs=46.3
Q ss_pred CcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceE-Ee---ceEEEEcchhhhHh
Q psy16425 99 TDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQE-DF---PFFKRTKKKKKKKK 156 (163)
Q Consensus 99 ~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~-~~---~~l~i~~v~~~~~~ 156 (163)
....+.+|+++.|.|.+.+.|.+ +.|++++..+....+... .. ..|.|.+++.+|.+
T Consensus 16 ~~~~v~~G~~v~l~C~~~~~~~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 76 (106)
T 2dlt_A 16 ADLTVKAAEQAVFKCEVSDEKVT-GKWYKNGVEVRPSKRITISHVGRFHKLVIDDVRPEDEG 76 (106)
T ss_dssp CCEEEESSCCEECCCEESCSSCE-EEEEESSCBCCCCSSCEEEEETTEEEEEESSCCTTTCS
T ss_pred CCeEEeCCCeEEEEEEEcCCCcc-eEEEcCCEECcCCCCEEEEEeCCEEEEEECCCCcCCCE
Confidence 36778999999999999998877 999999988766555443 22 47999999999876
No 488
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.57 E-value=1.4e-07 Score=55.48 Aligned_cols=57 Identities=21% Similarity=0.355 Sum_probs=45.7
Q ss_pred CcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCc--eE--E--eceEEEEcchhhhHh
Q psy16425 99 TDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNG--QE--D--FPFFKRTKKKKKKKK 156 (163)
Q Consensus 99 ~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~--~~--~--~~~l~i~~v~~~~~~ 156 (163)
....+.+|+++.|.|.+.+ |.+.+.|++++..+...... .. . ...|.|.+++.+|.+
T Consensus 15 ~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G 77 (103)
T 1x44_A 15 EDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAA 77 (103)
T ss_dssp CCEEEETTEEEEEEEECSS-SSCCCEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECTTTCS
T ss_pred CCEEEECCCCEEEEEEecC-CCCeEEEEECCEECCCCCceEEEEEEcCCEEEEEECCCCcccCE
Confidence 3577889999999999987 77999999999988666522 32 1 257999999999876
No 489
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=98.57 E-value=1.6e-07 Score=57.52 Aligned_cols=53 Identities=13% Similarity=0.202 Sum_probs=42.9
Q ss_pred CCCcEEEEeEeccCCCCeEEEEECCeEEEecCCce-----------EEeceEEEEcchhhhHhh
Q psy16425 105 EGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQ-----------EDFPFFKRTKKKKKKKKK 157 (163)
Q Consensus 105 ~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~-----------~~~~~l~i~~v~~~~~~~ 157 (163)
.+..+.|.|.+.|+|.|.|+|++||.++....... ...+.|.|.+++..|++.
T Consensus 14 ~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~ 77 (126)
T 1he7_A 14 EMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGN 77 (126)
T ss_dssp CCCEEEEEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEE
T ss_pred cCccEEEEEEEeeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEE
Confidence 56789999999999999999999999886654421 124679999999998763
No 490
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=98.56 E-value=1.3e-07 Score=54.79 Aligned_cols=55 Identities=15% Similarity=0.297 Sum_probs=46.9
Q ss_pred cEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceEEeceEEEEcchhhhHh
Q psy16425 100 DMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQEDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 100 ~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~l~i~~v~~~~~~ 156 (163)
...+.+|+++.|.|.+.+ .|.+.|++++..+....+....++.|.|.+++.+|++
T Consensus 10 ~~~v~~G~~~~l~C~~~~--~p~v~W~k~g~~~~~~~~~~~~~~~L~i~~~~~~D~G 64 (95)
T 4hwu_A 10 AYVVAPGESLELQCMLKD--AAVISWTKDGVHLGPNNRTVLIGEYLQIKGATPRDSG 64 (95)
T ss_dssp EEEECTTSCEEEECCCCT--TCEEEEEETTEEECCCSSEEEETTEEEECSCCGGGCE
T ss_pred cEEECCCCEEEEEEEeCC--CCEEEEEECCEECCCCceEEEeCCEEEECcCCcccCE
Confidence 566889999999999987 5799999999988766665667789999999999876
No 491
>2yc1_A Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_A 1dql_H 3cfi_C
Probab=98.56 E-value=8.6e-07 Score=53.40 Aligned_cols=72 Identities=15% Similarity=0.269 Sum_probs=48.2
Q ss_pred ceeEEEeeeecc--CCCEEEEEEcCC-c-e--EEeeee----eE--EecCCeEEEEeCC-CceEEEEEcccCCCCCeEEE
Q psy16425 3 ARMLIEIGEMLM--AESTVAWLRVDT-Q-T--ILTIQT----HV--ITKNHRIGVTHSE-TKAWYLHIREVRESDRGWYM 69 (163)
Q Consensus 3 ~~~~~~~~~~~~--~~~~i~W~k~~~-~-~--~~~~~~----~~--~~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~ 69 (163)
..+.|.|...+. ....|.||+... . + +..... .. ....+|+.+..+. .++++|.|.+++++|+|.|.
T Consensus 16 ~~vtL~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~ 95 (117)
T 2yc1_A 16 GSLRLSCTGSGFTFDNYAMHWLRQVPGEGLEWVSGISRSSGDIDYADSVKGRFTISRDDAKKTLSLQMNSLRAEDTAVYY 95 (117)
T ss_dssp CCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEE
T ss_pred CeEEEEEEecCcccCCCeEEEEEECCCCCcEEEEEEccCCCceeeCcccCCeEEEEEeCCCCEEEEEECCCCHHHCEEEE
Confidence 468888887643 257899999642 2 1 111110 01 1134688877653 56789999999999999999
Q ss_pred EEEEe
Q psy16425 70 CQVNT 74 (163)
Q Consensus 70 C~~~~ 74 (163)
|.+.+
T Consensus 96 C~~~~ 100 (117)
T 2yc1_A 96 CARGG 100 (117)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99864
No 492
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=98.56 E-value=1.3e-07 Score=62.99 Aligned_cols=67 Identities=12% Similarity=0.189 Sum_probs=48.2
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEEeCCC--ceE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREVRESDRGWYMCQVNTDPM--KSQ 80 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~--~~~ 80 (163)
..+.|.|...+.|.+.+.|++ ++..+. ... ...|.|.+++.+|+|.|+|.+.|... .+.
T Consensus 134 ~~v~L~C~~~g~p~~~v~W~~-~~~~~~--------~~~----------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~ 194 (218)
T 3k0w_A 134 STLVLQCVAVGSPIPHYQWFK-NELPLT--------HET----------KKLYMVPYVDLEHQGTYWCHVYNDRDSQDSK 194 (218)
T ss_dssp CCEEEECEEEBSSCCEEEEEE-TTEECT--------TCC----------SSEEEESSCCGGGCEEEEEEEECSSCEEECC
T ss_pred CcEEEEEEecccCCCeEEEEE-CCEECC--------CCC----------CCEEEEeecChhcCEEEEEEEEcCCCCceee
Confidence 357888999999999999999 554431 111 12799999999999999999987533 233
Q ss_pred eEEEEEEc
Q psy16425 81 VGYLEVVV 88 (163)
Q Consensus 81 ~~~l~v~~ 88 (163)
.+.|.|..
T Consensus 195 ~~~l~V~~ 202 (218)
T 3k0w_A 195 KVEIIIDE 202 (218)
T ss_dssp CEEEEECC
T ss_pred eEEEEEeC
Confidence 44555544
No 493
>1fo0_B Protein (BM3.3 T cell receptor beta-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_B* 2ol3_B* 1kb5_B 1kj2_B*
Probab=98.56 E-value=7e-07 Score=53.48 Aligned_cols=70 Identities=11% Similarity=0.117 Sum_probs=45.9
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCC-ce---EEee-ee---eEEec-CCeEEEEeCCCceEEEEEcccCCCCCeEEEEEEE
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDT-QT---ILTI-QT---HVITK-NHRIGVTHSETKAWYLHIREVRESDRGWYMCQVN 73 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~-~~---~~~~-~~---~~~~~-~~r~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~ 73 (163)
..+.|.|.....+...+.||+... .. +... .. ..... ++|+....... + +|.|.+++++|+|.|.|.+.
T Consensus 17 ~~vtL~C~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~-~-~L~I~~~~~~Dsg~Y~C~~~ 94 (112)
T 1fo0_B 17 QAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTD-T-ELRLQVANMSQGRTLYCTCS 94 (112)
T ss_dssp CCEEEEEEESCTTCCEEEEEEECTTCCEEEEEECCSTTCEEEEEETTEEEEEEEEET-T-EEEEEEESCCSCEEEEEEEE
T ss_pred CcEEEEEEeCCCCCceEEEEEECCCCCCEEEEEEeCCCceecCccccCCEEEEcCCC-C-eEEEcCCCHhHCEEEEEEEE
Confidence 468888887666778899999642 21 1111 10 00112 26777665432 3 89999999999999999995
Q ss_pred e
Q psy16425 74 T 74 (163)
Q Consensus 74 ~ 74 (163)
+
T Consensus 95 ~ 95 (112)
T 1fo0_B 95 A 95 (112)
T ss_dssp S
T ss_pred c
Confidence 4
No 494
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=98.55 E-value=1.4e-07 Score=54.88 Aligned_cols=57 Identities=18% Similarity=0.309 Sum_probs=44.4
Q ss_pred CcEEEeCCCcEEEEeEec-cCCCCeEEEEECCeEEEecCCceEEeceEEEEcchhhhHh
Q psy16425 99 TDMVIREGSNVTLKCAAS-GSPKPNITWRREGGELIAQGNGQEDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 99 ~~~~~~~g~~~~l~C~~~-~~p~p~v~W~~~~~~~~~~~~~~~~~~~l~i~~v~~~~~~ 156 (163)
....+.+|+++.|.|.+. +.|.|.+.|++++...... .....++.|.|.+++.+|.+
T Consensus 18 ~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~~~-~~~~~~~~L~i~~v~~~D~G 75 (98)
T 1gl4_B 18 RSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPS-RAMDFNGILTIRNVQPSDAG 75 (98)
T ss_dssp CEEEECTTCCEEEEEEEEESSSCCEEEEEEGGGBCCCT-TEEEETTEEEECSCCGGGCE
T ss_pred CCeEEecCCCEEEEEeCCCCCCCcEEEEEeCCCCCCCc-eeecCCCEEEEeCCChhhCE
Confidence 356788999999999998 6899999999975443222 22345678999999999875
No 495
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.55 E-value=3.2e-08 Score=57.98 Aligned_cols=56 Identities=14% Similarity=0.278 Sum_probs=45.9
Q ss_pred cEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceEEeceEEEEcchhhhHh
Q psy16425 100 DMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQEDFPFFKRTKKKKKKKK 156 (163)
Q Consensus 100 ~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~l~i~~v~~~~~~ 156 (163)
...+.+|+.+.|.|.+.+.| |.+.|++++..+.........+..|.|.+++.+|.+
T Consensus 12 ~~~v~~G~~v~L~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~~~~L~i~~v~~~D~G 67 (99)
T 2cr3_A 12 SFLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAESNRTRITGEEVEVQDSVPADSG 67 (99)
T ss_dssp ECCBCTTSCEEEECCCCSSC-CEEEEEESSSBCCCCSSEEECSSEEEETTCCTTTCE
T ss_pred CeEEeCCCcEEEEEEecCCC-CeEEEEECCEECCCCCcEEEECCEEEEccCCHHHCE
Confidence 44577899999999999977 799999999887655555555778999999998875
No 496
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.54 E-value=9.4e-08 Score=56.31 Aligned_cols=55 Identities=18% Similarity=0.233 Sum_probs=45.2
Q ss_pred EEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceE--E--eceEEEEcchhhhHh
Q psy16425 101 MVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQE--D--FPFFKRTKKKKKKKK 156 (163)
Q Consensus 101 ~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~--~--~~~l~i~~v~~~~~~ 156 (163)
..+.+|+++.|.|.+.+.|.| +.|++++..+........ . ...|.|.+++.+|.+
T Consensus 20 ~~v~~G~~v~l~C~~~~~p~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G 78 (104)
T 2e6p_A 20 LTFTTSERVVLTCELSRVDFP-ATWYKDGQKVEESELLVVKMDGRKHRLILPEAKVQDSG 78 (104)
T ss_dssp EEEESSSCEECCEECSSTTCC-CEEEETTEECCCBTTBEEEEETTEEEEEESSCCTTTCE
T ss_pred EEEeCCCcEEEEEEecCCCCc-cEEeeCCEECCCCCCEEEEeCCCEEEEEECCCChhhCE
Confidence 678999999999999999988 999999998866555443 1 246999999999875
No 497
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=98.54 E-value=1.4e-07 Score=55.17 Aligned_cols=66 Identities=11% Similarity=0.149 Sum_probs=48.6
Q ss_pred CCcccccCCCCcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceE--Ee--ceEEEEcchhhhHh
Q psy16425 89 PPDILDYPTSTDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQE--DF--PFFKRTKKKKKKKK 156 (163)
Q Consensus 89 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~--~~--~~l~i~~v~~~~~~ 156 (163)
+|.+...+. ....+.+|+++.|.|.+. .|.|.+.|++++..+........ .+ ..|.|.+++.+|.+
T Consensus 7 ~p~~~~~~~-~~~~v~~G~~v~l~C~~~-~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G 76 (100)
T 2yuv_A 7 GAAFAKILD-PAYQVDKGGRVRFVVELA-DPKLEVKWYKNGQEIRPSTKYIFEHKGCQRILFINNCQMTDDS 76 (100)
T ss_dssp SCCEEECCC-SCEEECTTEEEEEEEEES-CTTSCEEEEESSCBCCCBTTEEEEEETTEEEEEEEEECTTTCC
T ss_pred CCeEEecCC-CccEEcCCCcEEEEEEec-CCCceEEEEECCEECCCCCCEEEEecCCEEEEEEcCCCcCcCE
Confidence 444544332 235788999999999998 69999999999988765544432 21 36999999999876
No 498
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=98.54 E-value=3.7e-08 Score=55.71 Aligned_cols=51 Identities=16% Similarity=0.339 Sum_probs=38.1
Q ss_pred ceeEEEeeeeccCCCEEEEEEcCCceEEeeeeeEEecCCeEEEEeCCCceEEEEEccc-CCCCCeEEEEEEEe
Q psy16425 3 ARMLIEIGEMLMAESTVAWLRVDTQTILTIQTHVITKNHRIGVTHSETKAWYLHIREV-RESDRGWYMCQVNT 74 (163)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~i~~v-~~~d~G~Y~C~~~~ 74 (163)
..+.|.|...+.|. |+|+| ++..+.. . . +.+|.|.++ +.+|+|.|+|.+.+
T Consensus 15 ~~v~L~C~~~g~P~--i~W~k-dg~~l~~--------~------~----~~~L~I~~v~~~~DsG~Y~C~A~t 66 (82)
T 3r08_E 15 TSVELTCPLDSDEN--LKWEK-NGQELPQ--------K------H----DKHLVLQDFSEVEDSGYYVCYTPA 66 (82)
T ss_dssp TEEEEECSSCCCSS--CEEEE-TTEECTT--------C------C----SSCCBCCSCCTTTTCSCEEEECSS
T ss_pred CeEEEEEECCCCCc--EEEEE-CCEECcC--------C------C----CCEEEECccCccCcCEEEEEEEcc
Confidence 36889999988884 99999 5554411 0 1 127999996 78999999999853
No 499
>3b9v_A Heavy chain variable domain; antibody engineering, phage display, immune system; 1.80A {Homo sapiens} PDB: 1fvc_B 3p9w_B 1fgv_H 2vh5_H*
Probab=98.54 E-value=1.1e-06 Score=53.21 Aligned_cols=73 Identities=14% Similarity=0.310 Sum_probs=48.1
Q ss_pred ceeEEEeeeecc--CCCEEEEEEcCC-c-e--EEeee---ee-EE--ecCCeEEEEeCC-CceEEEEEcccCCCCCeEEE
Q psy16425 3 ARMLIEIGEMLM--AESTVAWLRVDT-Q-T--ILTIQ---TH-VI--TKNHRIGVTHSE-TKAWYLHIREVRESDRGWYM 69 (163)
Q Consensus 3 ~~~~~~~~~~~~--~~~~i~W~k~~~-~-~--~~~~~---~~-~~--~~~~r~~~~~~~-~~~~~L~i~~v~~~d~G~Y~ 69 (163)
..+.|.|...+. ....|.||+... . + +.... .. .. ...+|+.+..+. .++++|.|.+++++|+|.|.
T Consensus 16 ~~vtL~C~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~ 95 (120)
T 3b9v_A 16 GSLRLSCAASGFNIKDTYIGWVRRAPGKGEEWVASIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYY 95 (120)
T ss_dssp CCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEE
T ss_pred ccEEEEEEeeCccccccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCeEEEEEcCCCCEEEEEECCCCHHHCEEEE
Confidence 468888887643 357899999642 2 1 11111 00 11 124688877543 46789999999999999999
Q ss_pred EEEEeC
Q psy16425 70 CQVNTD 75 (163)
Q Consensus 70 C~~~~~ 75 (163)
|.+.+.
T Consensus 96 C~~~~~ 101 (120)
T 3b9v_A 96 CARWGG 101 (120)
T ss_dssp EEEECT
T ss_pred EEEEcC
Confidence 999543
No 500
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=98.53 E-value=2.3e-07 Score=53.80 Aligned_cols=57 Identities=11% Similarity=0.198 Sum_probs=46.1
Q ss_pred CcEEEeCCCcEEEEeEeccCCCCeEEEEECCeEEEecCCceE--Ee--ceEEEEcchhhhHh
Q psy16425 99 TDMVIREGSNVTLKCAASGSPKPNITWRREGGELIAQGNGQE--DF--PFFKRTKKKKKKKK 156 (163)
Q Consensus 99 ~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~--~~--~~l~i~~v~~~~~~ 156 (163)
....+.+|+++.|.|.+ +.|.+.+.|++++..+........ .+ ..|.|.+++.+|.+
T Consensus 16 ~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G 76 (95)
T 2k1m_A 16 RSVEVAAGSPAVFEAET-ERAGVKVRWQRGGSDISASNKYGLATEGTRHTLTVREVGPADQG 76 (95)
T ss_dssp CCEEEETTSCEEEEEEC-SSSSCCCEEECSSSEECSSTTCEEEEETTEEEEEESSCCTTCCS
T ss_pred CcEEEeCCCcEEEEEEe-CCCCCeEEEEECCEECCCCCcEEEEEcCCEEEEEEcCCCcccCE
Confidence 46778999999999999 788999999999998865554443 22 36999999999876
Done!