Query psy16426
Match_columns 194
No_of_seqs 125 out of 1312
Neff 9.9
Searched_HMMs 29240
Date Fri Aug 16 20:59:25 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16426.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16426hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2a38_A Titin; Z1Z2, structural 99.9 3.1E-20 1.1E-24 134.2 16.4 139 7-150 3-193 (194)
2 2j8h_A Titin, connectin; cardi 99.8 6.3E-20 2.2E-24 133.0 15.4 139 8-151 3-196 (197)
3 2wv3_A Neuroplastin; igcam, me 99.8 5.7E-19 1.9E-23 127.5 19.9 140 7-151 1-189 (190)
4 2rik_A Titin; I-SET IG fold, p 99.8 6.5E-19 2.2E-23 134.5 20.0 146 5-155 1-194 (284)
5 3b43_A Titin; I-SET IG fold, e 99.8 1.2E-19 4.2E-24 151.9 16.4 145 4-152 379-570 (570)
6 3lcy_A Titin; A-BAND, IG tande 99.8 2.5E-19 8.6E-24 129.4 15.5 142 6-152 4-196 (197)
7 2iep_A Muscle-specific kinase 99.8 4.4E-20 1.5E-24 133.2 11.0 140 6-153 4-191 (192)
8 2yd6_A PTPRD protein; hydrolas 99.8 4.7E-19 1.6E-23 130.3 16.2 141 6-151 3-203 (212)
9 2yd1_A Tyrosine-protein phosph 99.8 5E-19 1.7E-23 130.0 16.1 143 7-158 4-206 (212)
10 2rik_A Titin; I-SET IG fold, p 99.8 6.1E-19 2.1E-23 134.7 17.1 143 4-151 93-283 (284)
11 2v5t_A NCAM2, N-CAM 2, neural 99.8 3.8E-19 1.3E-23 127.8 14.0 137 8-151 1-187 (189)
12 2nzi_A Titin; IG-domain, FNIII 99.8 1.3E-18 4.3E-23 134.2 17.0 146 8-158 3-203 (305)
13 3b43_A Titin; I-SET IG fold, e 99.8 1.9E-18 6.6E-23 144.7 18.7 146 4-154 285-478 (570)
14 3k0w_A Mucosa-associated lymph 99.8 9.3E-19 3.2E-23 129.4 14.3 134 7-154 16-204 (218)
15 2va4_A NCAM2, N-CAM 2, neural 99.8 4E-18 1.4E-22 122.7 17.1 138 8-150 1-191 (192)
16 2c5d_C AXL oncogene, tyrosine- 99.8 1.2E-18 4.3E-23 126.1 14.4 131 8-150 1-191 (195)
17 3grw_A Fibroblast growth facto 99.8 1.8E-18 6.2E-23 129.0 14.7 159 7-166 9-231 (241)
18 1rhf_A Tyrosine-protein kinase 99.8 2.5E-18 8.6E-23 123.1 14.5 128 9-150 2-181 (182)
19 1epf_A NCAM, protein (neural c 99.8 2E-18 6.9E-23 124.4 13.9 135 8-148 1-187 (191)
20 2ifg_A High affinity nerve gro 99.8 1.6E-18 5.3E-23 136.9 13.9 144 6-154 155-347 (347)
21 3sgj_C Human FCG3A receptor; r 99.8 1.1E-18 3.9E-23 128.0 12.2 143 6-162 4-184 (204)
22 2wim_A N-CAM 2, NCAM2, neural 99.8 6.1E-19 2.1E-23 135.0 11.0 145 4-155 93-287 (291)
23 1qz1_A Neural cell adhesion mo 99.8 2.2E-18 7.7E-23 131.9 13.9 144 4-152 95-290 (291)
24 3b5h_A Cervical EMMPRIN, HAB18 99.8 1.3E-17 4.3E-22 119.7 17.0 130 19-152 8-183 (184)
25 2vr9_A Roundabout 1, ROBO; imm 99.8 1.8E-18 6.1E-23 127.2 12.3 141 5-151 5-205 (217)
26 3kld_A Contactin 4, axcam, BIG 99.8 3.7E-18 1.3E-22 136.3 14.5 129 14-151 210-382 (384)
27 2v9r_A Roundabout homolog 1; p 99.8 1.3E-18 4.4E-23 127.2 10.9 144 6-157 6-207 (212)
28 2jll_A NCAM2, neural cell adhe 99.8 1.4E-17 4.7E-22 132.5 17.7 143 9-157 1-199 (389)
29 3ojm_B Fibroblast growth facto 99.8 5.4E-19 1.9E-23 130.7 8.7 154 7-160 13-229 (231)
30 2v44_A NCAM2, neural cell adhe 99.8 1.7E-17 5.9E-22 119.4 15.2 128 11-146 4-181 (189)
31 3laf_A Deleted in colorectal c 99.8 5.2E-18 1.8E-22 135.4 13.7 136 11-154 223-403 (403)
32 3ejj_X Macrophage colony-stimu 99.8 4.4E-17 1.5E-21 124.5 18.3 147 5-154 84-283 (289)
33 4fa8_A Secreted protein BARF1; 99.8 1.5E-18 5.1E-23 127.5 9.6 125 18-145 2-195 (203)
34 1f97_A Junction adhesion molec 99.8 6.1E-18 2.1E-22 123.4 11.3 140 9-153 1-208 (212)
35 3p3y_A Neurofascin; IG domains 99.8 7.2E-18 2.5E-22 134.5 12.3 129 18-152 231-403 (404)
36 1fnl_A Low affinity immunoglob 99.8 2.1E-17 7.3E-22 118.0 13.5 133 5-151 3-173 (175)
37 2ec8_A MAST/stem cell growth f 99.8 3E-17 1E-21 135.8 15.9 147 7-154 209-413 (524)
38 4fqp_A Poliovirus receptor; im 99.8 1.8E-17 6E-22 128.6 13.6 141 4-155 112-307 (313)
39 2yd9_A Receptor-type tyrosine- 99.8 1.4E-17 4.7E-22 128.6 12.8 136 10-156 109-295 (304)
40 1f2q_A High affinity immunoglo 99.7 7.9E-18 2.7E-22 120.3 10.5 136 6-155 1-174 (176)
41 1cs6_A Axonin-1; neural cell a 99.7 2.7E-17 9.1E-22 130.6 14.6 134 9-151 206-381 (382)
42 2yd9_A Receptor-type tyrosine- 99.7 1.3E-17 4.5E-22 128.7 12.4 131 7-143 4-191 (304)
43 3rbs_A Myomesin-1; immunoglobu 99.7 4.2E-17 1.4E-21 120.0 14.4 133 9-150 3-205 (207)
44 3s97_C Contactin-1; carbonic a 99.7 1.2E-17 4.1E-22 120.9 11.1 134 9-151 8-200 (201)
45 2o26_X MAST/stem cell growth f 99.7 3.7E-17 1.3E-21 125.3 13.7 149 4-154 86-290 (290)
46 1bih_A Hemolin; insect immunit 99.7 5.9E-17 2E-21 129.0 15.1 126 15-150 218-394 (395)
47 4f80_A Butyrophilin subfamily 99.7 1.2E-16 4.2E-21 118.4 14.9 136 15-153 10-214 (226)
48 3ry4_A Low affinity immunoglob 99.7 5.1E-17 1.8E-21 115.1 12.2 129 8-150 3-169 (170)
49 4frw_A Poliovirus receptor-rel 99.7 3.5E-16 1.2E-20 114.1 14.9 131 15-149 5-208 (218)
50 2d3v_A Leukocyte immunoglobuli 99.7 9.2E-17 3.1E-21 116.7 11.7 129 5-140 1-180 (196)
51 3rjd_A High affinity immunoglo 99.7 1.8E-16 6.1E-21 119.3 13.7 135 9-157 1-172 (262)
52 1nbq_A JAM, junctional adhesio 99.7 5.6E-18 1.9E-22 123.4 5.1 142 8-150 3-207 (209)
53 2r15_A Myomesin-1; sarcomeric 99.7 2.1E-16 7.2E-21 115.4 13.6 86 63-152 125-210 (212)
54 2x1w_L Vascular endothelial gr 99.7 2.1E-16 7.1E-21 116.4 13.4 140 14-155 12-210 (213)
55 1qz1_A Neural cell adhesion mo 99.7 2.2E-16 7.4E-21 120.7 13.8 138 8-151 1-192 (291)
56 3laf_A Deleted in colorectal c 99.7 1.9E-16 6.6E-21 126.3 13.9 142 5-153 117-312 (403)
57 2v5m_A Dscam; neurobiology SPL 99.7 4.9E-17 1.7E-21 129.3 10.2 119 17-150 220-387 (388)
58 1ugn_A LIR1, leukocyte immunog 99.7 8.5E-16 2.9E-20 111.7 15.8 128 6-140 2-181 (198)
59 3qs7_E FL cytokine receptor; i 99.7 1.6E-16 5.4E-21 128.9 12.9 142 6-158 226-420 (423)
60 4dkd_C Macrophage colony-stimu 99.7 5.3E-16 1.8E-20 118.6 15.3 151 4-157 83-286 (292)
61 3p2t_A Leukocyte immunoglobuli 99.7 3.6E-16 1.2E-20 113.5 13.2 127 6-140 2-179 (196)
62 3u83_A Poliovirus receptor-rel 99.7 2.2E-16 7.4E-21 123.0 12.7 143 4-157 125-325 (331)
63 1vca_A VCAM-D1,2, human vascul 99.7 3.5E-16 1.2E-20 114.5 13.0 142 12-155 3-200 (202)
64 3knb_B Obscurin-like protein 1 99.7 1.9E-16 6.4E-21 104.7 10.4 96 54-154 12-107 (107)
65 2ny1_B T-cell surface glycopro 99.7 5.8E-16 2E-20 111.1 13.4 124 17-156 3-183 (184)
66 3qs9_E FL cytokine receptor; i 99.7 2.5E-16 8.6E-21 131.0 12.9 139 5-154 225-416 (527)
67 3r4d_A CEA-related cell adhesi 99.7 8.1E-16 2.8E-20 112.1 14.0 134 13-156 3-204 (208)
68 3dmk_A DOWN syndrome cell adhe 99.7 9E-16 3.1E-20 133.1 16.6 150 4-154 338-528 (816)
69 3oq3_B IFN-alpha/beta binding 99.7 5.6E-16 1.9E-20 121.2 13.9 142 7-150 126-328 (329)
70 2y23_A Myomesin; structural pr 99.7 9.1E-16 3.1E-20 118.3 14.4 134 9-150 106-310 (312)
71 3jz7_A MCAR, CAR, coxsackievir 99.7 1.2E-16 4.1E-21 116.6 8.8 134 13-153 4-213 (214)
72 3mjg_X Beta-type platelet-deri 99.7 8.7E-16 3E-20 117.5 14.0 137 19-156 105-282 (289)
73 2y25_A Myomesin; structural pr 99.7 3.4E-15 1.1E-19 115.3 17.3 85 64-152 231-315 (317)
74 3sbw_C Programmed cell death 1 99.7 2.2E-15 7.5E-20 110.9 15.5 89 66-157 127-216 (222)
75 2gi7_A GPVI protein; IG-like d 99.7 8.5E-16 2.9E-20 110.6 12.8 124 4-140 3-168 (184)
76 2ec8_A MAST/stem cell growth f 99.7 1.3E-15 4.5E-20 125.9 15.2 151 4-155 109-312 (524)
77 2wim_A N-CAM 2, NCAM2, neural 99.7 8.6E-16 2.9E-20 117.4 12.8 140 8-155 3-194 (291)
78 1ry7_B FGFR-3, fibroblast grow 99.7 1.1E-16 3.7E-21 125.0 7.7 140 18-157 132-332 (334)
79 3mj8_L Stimulatory hamster ant 99.7 4E-16 1.4E-20 114.3 9.4 136 10-147 2-208 (213)
80 1uct_A Immunoglobulin alpha FC 99.7 1.7E-15 5.9E-20 112.2 12.8 141 1-153 1-199 (218)
81 2wng_A Tyrosine-protein phosph 99.6 1.6E-15 5.4E-20 118.2 12.7 124 18-144 126-311 (327)
82 3d9a_L Light chain of hyhel10 99.6 1.9E-15 6.4E-20 110.7 12.3 137 11-148 3-209 (213)
83 3bp6_B Programmed cell death 1 99.6 3E-15 1E-19 108.9 13.3 134 12-153 5-194 (202)
84 4fom_A Poliovirus receptor-rel 99.6 8.3E-17 2.8E-21 124.3 4.6 131 15-155 120-303 (308)
85 1itb_B Type 1 interleukin-1 re 99.6 3.4E-15 1.2E-19 115.5 13.7 132 19-151 113-313 (315)
86 3kld_A Contactin 4, axcam, BIG 99.6 1.8E-15 6.1E-20 120.7 12.3 82 65-154 215-296 (384)
87 4i0k_A CD276 antigen; immunogl 99.6 5.1E-15 1.7E-19 109.0 13.5 139 17-158 3-212 (222)
88 3vh8_G Killer cell immunoglobu 99.6 3.5E-15 1.2E-19 115.8 13.2 143 4-154 19-217 (316)
89 2rcj_C Light chain; immunoglob 99.6 3.4E-15 1.2E-19 123.4 13.9 144 7-152 112-316 (523)
90 1oll_A NK receptor; immune sys 99.6 1.8E-14 6E-19 104.0 15.8 119 8-139 3-172 (188)
91 2cqv_A MLCK, myosin light chai 99.6 4.9E-15 1.7E-19 98.5 11.5 100 54-158 6-105 (114)
92 3knb_A Titin; IG-like, titin, 99.6 2.3E-15 7.7E-20 98.2 9.4 94 54-152 4-99 (100)
93 3qs7_E FL cytokine receptor; i 99.6 4.7E-15 1.6E-19 120.2 13.1 145 6-155 137-326 (423)
94 2ocw_A Polymeric-immunoglobuli 99.6 8.4E-15 2.9E-19 122.5 14.9 149 4-154 326-548 (585)
95 1p6f_A NKP46, natural cytotoxi 99.6 3.2E-14 1.1E-18 107.1 16.5 141 5-158 3-197 (242)
96 3r06_A Anti-mouse CD3epsilon a 99.6 5.7E-15 1.9E-19 108.1 12.1 133 10-143 2-204 (213)
97 3v2a_R Vascular endothelial gr 99.6 3.8E-17 1.3E-21 140.5 0.0 147 4-158 545-762 (772)
98 2fbo_J V1V2;, variable region- 99.6 6.2E-15 2.1E-19 110.2 12.0 85 65-150 146-250 (250)
99 1lk3_L 9D7 light chain; antige 99.6 9.5E-15 3.2E-19 106.9 12.3 130 11-142 3-202 (210)
100 3dmk_A DOWN syndrome cell adhe 99.6 2.6E-15 8.9E-20 130.2 10.3 146 6-153 615-810 (816)
101 3sob_L Antibody light chain; b 99.6 1.2E-14 4E-19 108.0 12.2 142 6-148 21-232 (237)
102 3nl4_L Antigen binding fragmen 99.6 2.4E-14 8.4E-19 104.7 13.1 126 10-136 2-198 (213)
103 3s96_B 3B5H10 FAB light chain; 99.6 1.5E-14 5E-19 106.2 11.8 135 10-146 2-214 (218)
104 4fmk_A Poliovirus receptor-rel 99.6 5E-14 1.7E-18 103.0 14.5 134 18-153 10-220 (225)
105 3qp3_A Titin; I-SET IG-like, s 99.6 1.8E-14 6.3E-19 93.8 10.7 95 54-153 7-101 (103)
106 2kdg_A Myotilin; immonoglobuli 99.6 9.3E-15 3.2E-19 94.7 9.2 96 54-153 4-99 (100)
107 3mj6_A Junctional adhesion mol 99.6 7.4E-15 2.5E-19 111.1 9.9 149 8-156 4-241 (268)
108 3pv7_A B7-H6, IG-like domain-c 99.6 4.9E-14 1.7E-18 105.6 14.2 140 10-150 3-224 (248)
109 2dm2_A Palladin; beta-sandwich 99.6 8.1E-15 2.8E-19 96.8 8.7 101 54-158 7-108 (110)
110 1e07_A Carcinoembryonic antige 99.6 4E-14 1.4E-18 119.7 15.0 125 9-151 468-639 (642)
111 1g1c_A Immunoglobulin-like dom 99.6 3.3E-14 1.1E-18 91.8 11.3 94 54-151 4-97 (99)
112 3o4o_C Interleukin-1 receptor 99.6 4.1E-15 1.4E-19 116.3 8.3 141 6-153 15-221 (339)
113 1wwb_X Protein (brain derived 99.6 2.7E-14 9.3E-19 93.4 10.7 99 53-155 2-101 (103)
114 1q0x_L FAB 9B1, light chain; a 99.6 5.7E-14 1.9E-18 102.8 13.5 133 11-145 3-208 (212)
115 2dm3_A KIAA0992 protein, palla 99.6 5.1E-15 1.8E-19 97.6 7.1 101 54-158 8-108 (110)
116 2rgs_A I, IG gamma-2B heavy ch 99.6 6.7E-15 2.3E-19 108.8 8.5 135 7-142 7-206 (218)
117 1fhg_A Telokin; immunoglobulin 99.6 2.6E-14 9E-19 100.1 11.1 102 52-157 38-139 (154)
118 2kkq_A Myotilin; unknown funct 99.6 2.4E-14 8.2E-19 95.7 10.4 100 54-157 14-114 (116)
119 2c1o_A IGK-C protein; FAB frag 99.6 2.5E-14 8.7E-19 107.5 11.7 135 7-142 36-245 (254)
120 1wio_A CD4, T-cell surface gly 99.6 2.3E-14 8E-19 113.2 12.0 129 19-151 106-292 (363)
121 1ry7_B FGFR-3, fibroblast grow 99.6 1.1E-15 3.8E-20 119.2 4.2 140 9-153 9-217 (334)
122 1e07_A Carcinoembryonic antige 99.6 4.9E-14 1.7E-18 119.2 14.5 143 6-157 377-562 (642)
123 3rjd_A High affinity immunoglo 99.6 4.6E-14 1.6E-18 106.0 13.0 122 6-142 80-249 (262)
124 1nkr_A P58-CL42 KIR; inhibitor 99.6 7.4E-14 2.5E-18 101.7 13.4 125 4-138 3-183 (201)
125 1u2h_A APEG-1, aortic preferen 99.6 4.3E-14 1.5E-18 91.3 10.8 94 54-151 4-97 (99)
126 3oq3_B IFN-alpha/beta binding 99.6 1.3E-14 4.4E-19 113.4 9.8 138 9-154 29-226 (329)
127 1sy6_A T-cell surface glycopro 99.6 1.1E-14 3.7E-19 106.8 8.7 74 69-150 127-202 (204)
128 3ejj_X Macrophage colony-stimu 99.6 5.4E-14 1.9E-18 107.2 12.9 134 8-152 3-181 (289)
129 3irg_B Obscurin-like protein 1 99.6 3.2E-14 1.1E-18 93.2 10.0 96 54-154 12-107 (107)
130 3kvq_A Vascular endothelial gr 99.6 8.5E-15 2.9E-19 96.2 7.0 99 53-158 8-106 (108)
131 3u83_A Poliovirus receptor-rel 99.6 4.1E-14 1.4E-18 110.0 12.0 142 9-153 14-231 (331)
132 3p3y_A Neurofascin; IG domains 99.6 1.3E-14 4.5E-19 115.6 9.4 141 6-154 112-313 (404)
133 3uzq_A Anti-dengue MAB 4E11; d 99.6 1.3E-13 4.5E-18 103.8 14.4 99 56-158 134-250 (253)
134 2oz4_A Intercellular adhesion 99.6 7.2E-15 2.5E-19 111.3 7.3 120 9-152 100-264 (265)
135 3auv_A SC-DSFV derived from th 99.5 8.7E-14 3E-18 106.3 13.1 149 7-157 10-259 (276)
136 2wng_A Tyrosine-protein phosph 99.5 2.8E-14 9.7E-19 111.1 10.6 130 9-141 3-205 (327)
137 3puc_A Titin; I-SET IG-like do 99.5 8.5E-14 2.9E-18 89.8 11.0 93 54-151 5-97 (99)
138 2p1y_A Bispecific alpha/beta T 99.5 2.3E-13 7.8E-18 101.3 14.9 126 11-139 2-222 (238)
139 2o26_X MAST/stem cell growth f 99.5 2.8E-14 9.7E-19 109.1 10.1 135 5-151 8-182 (290)
140 2pet_A Lutheran blood group gl 99.5 6.3E-14 2.2E-18 103.5 11.5 123 15-138 6-211 (231)
141 2rcj_C Light chain; immunoglob 99.5 1.5E-13 5.1E-18 113.6 14.9 134 14-148 5-210 (523)
142 4dep_C Interleukin-1 receptor 99.5 6.8E-15 2.3E-19 115.4 6.5 135 18-152 129-333 (349)
143 3bkj_L WO2 IGG2A FAB fragment 99.5 7.1E-14 2.4E-18 105.2 11.7 137 5-142 30-241 (252)
144 2edj_A Roundabout homolog 2; K 99.5 7.2E-14 2.5E-18 90.5 9.9 94 54-154 7-100 (100)
145 2vol_A Murine IGG FC; FC, zinc 99.5 3.9E-14 1.3E-18 103.8 9.1 131 10-141 2-197 (207)
146 3qs9_E FL cytokine receptor; i 99.5 6.1E-14 2.1E-18 116.7 11.4 130 19-154 149-325 (527)
147 2e7c_A Myosin-binding protein 99.5 1.4E-13 4.8E-18 92.0 11.0 95 54-154 20-117 (118)
148 3umt_A SCFV heavy chain and li 99.5 6.3E-13 2.2E-17 100.2 15.6 93 57-153 140-246 (256)
149 2ocw_A Polymeric-immunoglobuli 99.5 3E-13 1E-17 113.0 15.2 139 15-154 6-223 (585)
150 3bqu_C 3H6 FAB light chain; be 99.5 1.9E-14 6.4E-19 106.9 6.9 136 5-141 19-224 (233)
151 1nfd_E H57 FAB; complex (immun 99.5 8.4E-15 2.9E-19 107.2 5.0 128 12-142 3-202 (212)
152 2znx_A SCFV; fluorotryptohpan, 99.5 6.7E-13 2.3E-17 99.3 15.5 127 10-138 2-222 (242)
153 2ghw_B Anti-SARS SCFV antibody 99.5 1.7E-12 5.9E-17 97.1 17.7 86 62-151 142-241 (247)
154 4dkd_C Macrophage colony-stimu 99.5 3.5E-14 1.2E-18 108.4 8.5 134 7-152 2-181 (292)
155 1b6u_A KIR2DL3, P58 killer cel 99.5 1.4E-13 4.8E-18 104.5 11.3 142 4-155 2-204 (257)
156 1wit_A Twitchin 18TH IGSF modu 99.5 5.3E-14 1.8E-18 90.0 7.7 90 55-150 2-92 (93)
157 3gkz_A Anti-methamphetamine si 99.5 9.8E-13 3.3E-17 99.1 15.7 93 61-157 147-254 (257)
158 1z7z_I Intercellular adhesion 99.5 3.9E-14 1.4E-18 114.8 8.5 121 12-141 2-167 (450)
159 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.5 3.7E-13 1.3E-17 101.6 13.1 129 10-142 4-236 (256)
160 1cs6_A Axonin-1; neural cell a 99.5 5E-14 1.7E-18 111.7 8.7 130 7-142 2-184 (382)
161 2yr3_A Myosin light chain kina 99.5 7.7E-14 2.6E-18 90.2 8.0 91 52-150 8-98 (99)
162 2bk8_A Connectin, M1, titin he 99.5 7E-13 2.4E-17 85.3 12.5 91 58-153 4-95 (97)
163 3tv3_L PGT128 light chain, IG 99.5 7.4E-14 2.5E-18 102.1 8.8 132 11-146 3-205 (211)
164 1bih_A Hemolin; insect immunit 99.5 3.5E-14 1.2E-18 112.9 7.6 132 5-145 2-193 (395)
165 1nqb_A Single-chain antibody f 99.5 1.5E-12 5.2E-17 98.4 16.2 88 62-153 128-234 (256)
166 1nct_A Titin; cell adhesion, g 99.5 9.2E-14 3.1E-18 91.3 8.2 93 54-151 13-105 (106)
167 2v5m_A Dscam; neurobiology SPL 99.5 5.1E-14 1.7E-18 111.8 8.3 141 6-154 100-308 (388)
168 1l6x_A Immunoglobulin gamma-1 99.5 1.2E-13 4.1E-18 101.1 9.4 131 10-141 2-197 (207)
169 2xzc_L FAB A.17 light chain; i 99.5 2.9E-13 1E-17 99.3 11.5 79 69-148 128-211 (216)
170 3esu_F Antibody 14B7* light ch 99.5 6E-13 2.1E-17 99.7 13.2 127 9-137 4-231 (250)
171 3irg_A Titin; IG-like, titin, 99.5 3.3E-13 1.1E-17 87.1 10.2 92 55-151 5-98 (100)
172 1c1e_H Catalytic antibody 1E9 99.5 4.6E-13 1.6E-17 98.4 11.9 78 68-148 137-216 (219)
173 1mju_H Immunoglobulin MS6-12; 99.5 4.9E-13 1.7E-17 99.3 12.0 89 67-158 133-223 (227)
174 1he7_A High affinity nerve gro 99.5 5.3E-13 1.8E-17 90.2 11.0 87 69-156 14-103 (126)
175 1z7z_I Intercellular adhesion 99.5 4.5E-12 1.5E-16 102.7 18.1 143 5-155 81-285 (450)
176 4fqp_A Poliovirus receptor; im 99.5 6.9E-13 2.3E-17 102.6 12.7 138 12-151 3-214 (313)
177 2oz4_A Intercellular adhesion 99.5 2.7E-13 9.2E-18 102.6 10.1 127 8-156 5-186 (265)
178 1gxe_A Myosin binding protein 99.5 2.6E-13 8.9E-18 93.6 9.1 86 62-151 25-138 (139)
179 2wqr_A IG epsilon chain C regi 99.5 7.6E-14 2.6E-18 108.7 7.1 136 7-142 5-204 (323)
180 2yuz_A Myosin-binding protein 99.5 3.3E-13 1.1E-17 87.8 9.0 92 55-155 7-98 (100)
181 1moe_A Anti-CEA MAB T84.66; an 99.5 1E-12 3.5E-17 97.8 12.9 126 10-137 2-219 (240)
182 1wio_A CD4, T-cell surface gly 99.5 3E-13 1E-17 106.8 10.5 123 18-156 3-182 (363)
183 2zg1_A Sialic acid-binding IG- 99.5 7.2E-13 2.5E-17 96.8 11.7 73 67-150 135-213 (214)
184 3o4o_C Interleukin-1 receptor 99.5 1.8E-14 6E-19 112.7 3.2 132 18-151 129-334 (339)
185 4dzb_B Vbeta2 (MAIT T cell rec 99.5 5.2E-13 1.8E-17 99.9 11.0 133 10-143 2-222 (246)
186 1i1c_A IGG2A, IG gamma-2A chai 99.5 1.9E-13 6.4E-18 102.6 8.3 134 8-142 14-212 (239)
187 1qgc_4 Protein (immunoglobulin 99.5 1.1E-12 3.6E-17 105.8 13.3 131 8-140 115-321 (438)
188 3cx2_A Myosin-binding protein 99.5 9.2E-13 3.1E-17 86.7 10.7 97 55-151 4-107 (108)
189 1dr9_A B7-1 (CD80), T lymphocy 99.5 3.3E-12 1.1E-16 92.5 14.7 77 68-148 119-197 (201)
190 1hng_A CD2; T lymphocyte adhes 99.4 3.2E-13 1.1E-17 96.6 8.8 66 69-150 109-174 (176)
191 3m45_A Cell adhesion molecule 99.4 1.3E-12 4.6E-17 85.3 11.1 96 55-154 6-108 (108)
192 2y23_A Myomesin; structural pr 99.4 1.7E-12 5.7E-17 99.9 13.3 128 18-148 10-198 (312)
193 3d9a_H Heavy chain of hyhel10 99.4 6.2E-13 2.1E-17 97.2 10.4 76 67-145 130-207 (210)
194 2wqr_A IG epsilon chain C regi 99.4 2.4E-13 8.4E-18 105.8 8.6 132 9-141 112-309 (323)
195 3vh8_G Killer cell immunoglobu 99.4 3.3E-13 1.1E-17 104.6 9.3 137 8-154 118-315 (316)
196 2dav_A SLOW MYBP-C, myosin-bin 99.4 8.5E-13 2.9E-17 89.3 10.1 100 57-157 9-117 (126)
197 1wwc_A Protein (NT-3 growth fa 99.4 7.9E-13 2.7E-17 88.3 9.9 85 71-156 21-105 (118)
198 3juy_B 3B3 single chain varian 99.4 8.1E-12 2.8E-16 94.1 16.5 129 8-140 5-244 (256)
199 1svz_A Immunoglobulin;, single 99.4 4.2E-12 1.4E-16 95.0 14.7 127 10-138 2-228 (247)
200 4dep_C Interleukin-1 receptor 99.4 5.5E-13 1.9E-17 104.5 10.3 128 16-152 14-217 (349)
201 2eo9_A Roundabout homolog 1; b 99.4 2.5E-13 8.7E-18 90.7 7.2 94 54-154 7-100 (118)
202 3eow_R Poliovirus receptor; im 99.4 4.5E-13 1.5E-17 98.6 9.2 86 68-157 128-215 (221)
203 3omz_A Human vdelta1 gamma del 99.4 3.6E-13 1.2E-17 101.7 8.8 128 9-138 2-231 (259)
204 1igt_B IGG2A intact antibody - 99.4 5.7E-13 1.9E-17 108.0 10.6 133 9-142 123-331 (444)
205 1qgc_4 Protein (immunoglobulin 99.4 1E-12 3.6E-17 105.9 11.7 137 11-148 3-213 (438)
206 2edf_A Obscurin; beta-sandwich 99.4 1.6E-12 5.3E-17 84.6 10.1 94 54-157 7-100 (103)
207 1itb_B Type 1 interleukin-1 re 99.4 3E-13 1E-17 104.5 7.3 118 17-142 13-189 (315)
208 2cry_A KIN of IRRE-like protei 99.4 6.2E-14 2.1E-18 94.3 2.8 102 52-154 11-115 (122)
209 1pz5_B Heavy chain of FAB (SYA 99.4 1.5E-12 5.3E-17 95.7 10.5 76 68-148 138-217 (220)
210 1q9r_B S25-2 FAB (IGG1K) heavy 99.4 3.6E-12 1.2E-16 93.9 12.3 78 68-148 140-219 (222)
211 2if7_A SLAM family member 6; N 99.4 7.8E-12 2.7E-16 90.5 13.9 63 69-147 122-187 (193)
212 1f3r_B FV antibody fragment; I 99.4 2.1E-12 7E-17 97.5 10.9 86 66-155 150-248 (257)
213 1qok_A MFE-23 recombinant anti 99.4 2.3E-11 8E-16 93.0 16.9 84 64-152 171-268 (282)
214 1x44_A Myosin-binding protein 99.4 4.3E-12 1.5E-16 82.6 11.0 89 58-156 10-100 (103)
215 1jbj_A CD3 epsilon and gamma e 99.4 3.7E-13 1.3E-17 97.0 6.3 59 69-142 121-179 (186)
216 1waa_A Titin; metal binding pr 99.4 7.3E-12 2.5E-16 80.3 11.7 87 55-151 5-91 (93)
217 2j6e_L IGM, FAB light chain; a 99.4 2.7E-13 9.2E-18 100.5 5.4 77 69-146 149-229 (234)
218 2e6p_A Obscurin-like protein 1 99.4 1.8E-12 6.1E-17 84.5 8.6 93 55-157 7-102 (104)
219 2gjj_A A21 single-chain antibo 99.4 1.8E-11 6.2E-16 92.9 15.2 129 8-138 4-239 (264)
220 2w59_A IGY FCU3-4; immunoglobu 99.4 2.2E-12 7.4E-17 96.1 9.8 134 8-142 11-218 (231)
221 3ux9_B SCFV antibody; five hel 99.4 6.6E-12 2.2E-16 94.4 12.3 73 65-139 144-236 (256)
222 1gsm_A Madcam-1, mucosal addre 99.4 2.1E-11 7.3E-16 89.6 14.6 130 9-144 6-197 (210)
223 2edn_A Myosin-binding protein 99.4 2.7E-12 9.1E-17 85.9 8.9 98 56-153 13-117 (118)
224 2ckn_A Basic fibroblast growth 99.4 1.3E-12 4.5E-17 83.9 6.9 86 55-150 9-94 (95)
225 3s35_X Vascular endothelial gr 99.4 7.3E-12 2.5E-16 83.9 10.9 93 63-156 16-114 (122)
226 3caf_A Fibroblast growth facto 99.4 4.3E-13 1.5E-17 86.8 4.6 83 63-150 16-99 (100)
227 1igt_B IGG2A intact antibody - 99.4 1.5E-12 5.2E-17 105.5 8.7 134 7-141 236-434 (444)
228 1dee_B IGM RF 2A2; FAB-IBP com 99.4 3.4E-11 1.2E-15 88.9 15.4 79 68-146 139-221 (223)
229 3bfo_A Mucosa-associated lymph 99.4 4.8E-12 1.6E-16 80.5 9.3 84 55-152 3-87 (91)
230 2yuv_A Myosin-binding protein 99.4 2.1E-11 7.3E-16 78.8 12.5 91 55-155 7-98 (100)
231 3q5y_A TCR N15 beta; IG, T cel 99.4 1.2E-11 4.2E-16 92.1 12.9 72 69-141 136-213 (240)
232 3mtr_A N-CAM-1, NCAM-1, neural 99.4 1.1E-11 3.8E-16 90.8 12.2 99 54-158 18-118 (215)
233 1hzh_H IGG, immunoglobulin hea 99.4 1.9E-12 6.6E-17 105.3 8.9 134 8-142 246-444 (457)
234 2fbj_H IGA-kappa J539 FAB (hea 99.4 1.4E-11 4.9E-16 90.8 12.9 75 68-143 135-212 (220)
235 3rbg_A Cytotoxic and regulator 99.4 6.7E-12 2.3E-16 84.6 10.0 92 61-156 7-105 (124)
236 2lu7_A Obscurin-like protein 1 99.4 6.1E-12 2.1E-16 79.1 9.2 80 63-152 4-83 (84)
237 1za6_B IGG heavy chain; immuno 99.4 3.6E-12 1.2E-16 100.1 9.9 75 67-143 132-208 (344)
238 4fom_A Poliovirus receptor-rel 99.4 4.5E-12 1.5E-16 97.6 10.2 83 67-153 126-211 (308)
239 1x9q_A SCFV, 4M5.3 anti-fluore 99.4 2E-11 6.8E-16 92.6 13.6 41 6-46 12-57 (268)
240 3v2a_R Vascular endothelial gr 99.3 1.5E-11 5.1E-16 105.7 14.2 138 16-155 133-329 (772)
241 4acp_A IG gamma-1 chain C regi 99.3 3.7E-12 1.3E-16 95.7 8.4 132 8-140 21-217 (240)
242 3fku_X Neutralizing antibody F 99.3 1.8E-11 6.1E-16 93.7 12.4 86 65-154 149-252 (280)
243 2dlt_A Myosin binding protein 99.3 1E-11 3.5E-16 81.2 9.5 89 54-148 7-95 (106)
244 2dku_A KIAA1556 protein; beta- 99.3 1.2E-11 4.2E-16 80.3 9.8 94 55-158 8-101 (103)
245 2cr3_A Basic fibroblast growth 99.3 4.5E-12 1.6E-16 82.0 7.6 86 63-158 11-96 (99)
246 3nfj_J T cell receptor beta ch 99.3 1.9E-11 6.6E-16 91.3 12.1 132 11-143 3-221 (245)
247 2yd1_A Tyrosine-protein phosph 99.3 4.7E-11 1.6E-15 87.1 13.9 97 54-154 5-104 (212)
248 2eny_A Obscurin; beta-sandwich 99.3 5.8E-12 2E-16 82.4 8.1 93 56-157 9-102 (104)
249 2aty_A Complement receptor chi 99.3 7.1E-12 2.4E-16 100.0 9.9 128 13-141 171-362 (376)
250 1gl4_B Basement membrane-speci 99.3 6.4E-12 2.2E-16 80.9 7.8 80 62-151 17-97 (98)
251 1dn0_B IGM-kappa cold agglutin 99.3 6.8E-11 2.3E-15 88.0 14.3 82 69-150 139-225 (232)
252 2v9t_A Roundabout homolog 1; s 99.3 2.4E-12 8.2E-17 85.7 5.8 98 53-151 7-108 (117)
253 4ei6_B Vbeta16 XV19 type II na 99.3 1.6E-11 5.4E-16 91.7 10.9 73 69-142 138-220 (245)
254 2j8h_A Titin, connectin; cardi 99.3 2E-11 6.7E-16 87.9 11.0 97 54-153 3-99 (197)
255 2edh_A Obscurin; structural ge 99.3 6.5E-11 2.2E-15 78.2 12.7 92 55-157 19-110 (113)
256 1za6_B IGG heavy chain; immuno 99.3 5.2E-12 1.8E-16 99.2 8.4 134 8-142 119-331 (344)
257 2gki_A Nuclease; anti-DNA anti 99.3 5.2E-11 1.8E-15 91.6 13.8 72 64-139 168-258 (291)
258 2v5y_A Receptor-type tyrosine- 99.3 1.6E-11 5.5E-16 105.6 11.9 128 24-156 91-264 (731)
259 3lcy_A Titin; A-BAND, IG tande 99.3 2.8E-11 9.5E-16 86.8 11.4 97 53-154 5-101 (197)
260 2k1m_A Myosin-binding protein 99.3 3.4E-11 1.2E-15 77.2 10.6 86 56-151 9-94 (95)
261 3liz_H 4C3 monoclonal antibody 99.3 1.7E-11 5.8E-16 92.4 10.6 82 67-151 136-219 (253)
262 1igy_B IGG1 intact antibody MA 99.3 1.6E-12 5.6E-17 105.1 4.7 120 21-141 242-424 (434)
263 2lvc_A Obscurin-like protein 1 99.3 1.8E-11 6.1E-16 78.2 8.6 78 55-138 4-83 (91)
264 3bae_H WO2 IGG2A FAB fragment 99.3 3.6E-11 1.2E-15 89.1 11.4 78 68-148 143-222 (228)
265 3m8o_H Immunoglobulin A1 heavy 99.3 8E-11 2.8E-15 86.6 13.2 74 68-142 136-213 (221)
266 2xqy_G A13-D6.3 monoclonal ant 99.3 4.9E-11 1.7E-15 90.5 12.2 75 68-145 142-218 (261)
267 2yd6_A PTPRD protein; hydrolas 99.3 4.6E-11 1.6E-15 87.3 11.7 97 53-153 4-101 (212)
268 4hwu_A Fibroblast growth facto 99.3 2.7E-11 9.1E-16 77.6 9.2 84 61-155 7-90 (95)
269 2edk_A Myosin-binding protein 99.3 4.7E-12 1.6E-16 82.1 5.6 90 54-153 7-100 (101)
270 1op3_H FAB 2G12, heavy chain; 99.3 2.5E-11 8.7E-16 89.7 10.3 74 68-143 141-216 (225)
271 2e7b_A Obscurin; IG-like domai 99.3 1.7E-11 5.8E-16 79.6 8.1 91 55-155 8-98 (103)
272 3qr2_A Basigin; CD147, EMMPRIN 99.3 2.6E-11 8.8E-16 83.0 9.4 91 52-143 18-117 (137)
273 1iga_A IGA1; immunoglobulin; N 99.3 7E-11 2.4E-15 96.6 13.4 80 67-148 259-341 (475)
274 2cpc_A KIAA0657 protein; immun 99.3 6.8E-11 2.3E-15 78.0 10.8 81 65-155 23-103 (113)
275 2cr6_A KIAA1556 protein, obscu 99.3 1.4E-11 4.7E-16 81.9 7.4 91 57-155 15-105 (115)
276 3so5_A LIG-3, leucine-rich rep 99.3 3E-11 1E-15 79.0 8.9 96 54-150 9-111 (112)
277 3pl6_D MBP peptide / T-cell re 99.3 3.1E-11 1E-15 91.4 9.6 73 69-142 160-242 (268)
278 3qib_D 2B4 beta chain; IG doma 99.2 4.8E-11 1.6E-15 90.5 10.6 133 8-142 26-245 (270)
279 2nzi_A Titin; IG-domain, FNIII 99.2 5.1E-11 1.8E-15 91.4 10.8 98 54-154 3-100 (305)
280 1z9m_A GAPA225; nectin-like, I 99.2 1.3E-10 4.5E-15 80.3 11.8 95 60-158 43-144 (145)
281 3nl4_H Antigen binding fragmen 99.2 3.1E-11 1.1E-15 88.5 9.0 78 67-149 132-211 (215)
282 1ccz_A Protein (CD58); LFA-3, 99.2 5.8E-11 2E-15 84.5 10.1 114 17-148 3-167 (171)
283 1hzh_H IGG, immunoglobulin hea 99.2 1.9E-11 6.4E-16 99.4 8.0 135 9-144 132-342 (457)
284 2dm7_A KIAA1556 protein; beta- 99.2 9.5E-11 3.3E-15 76.7 9.8 91 54-155 7-97 (108)
285 2a38_A Titin; Z1Z2, structural 99.2 6.8E-11 2.3E-15 84.7 9.6 94 54-152 4-99 (194)
286 1hxm_B Gamma-delta T-cell rece 99.2 3.8E-10 1.3E-14 84.3 14.0 80 69-150 146-227 (242)
287 2wbj_D OB TCR; transmembrane, 99.2 1.4E-10 4.7E-15 88.6 11.7 135 8-143 23-247 (279)
288 2ens_A Advanced glycosylation 99.2 1.8E-11 6.2E-16 78.5 5.4 83 55-151 10-94 (96)
289 3o3u_N Maltose-binding peripla 99.2 2.4E-10 8E-15 95.6 13.0 123 17-142 374-567 (581)
290 1pd6_A Cardiac MYBP-C;, myosin 99.2 1.8E-10 6E-15 75.3 9.7 77 55-137 15-93 (104)
291 1igy_B IGG1 intact antibody MA 99.2 1E-10 3.5E-15 94.5 10.4 79 67-148 131-211 (434)
292 2e6q_A Obscurin-like protein 1 99.2 6.1E-10 2.1E-14 73.7 12.2 92 55-156 8-109 (112)
293 2c5d_C AXL oncogene, tyrosine- 99.2 3.8E-10 1.3E-14 81.0 12.1 99 55-154 2-107 (195)
294 1iga_A IGA1; immunoglobulin; N 99.2 3.7E-10 1.3E-14 92.4 13.1 132 8-141 245-443 (475)
295 1c5d_H Monoclonal antibody aga 99.2 3.2E-10 1.1E-14 83.2 11.2 73 68-145 135-209 (215)
296 3bp6_B Programmed cell death 1 99.2 2.2E-10 7.4E-15 82.9 9.8 100 58-158 5-109 (202)
297 3zyj_A Leucine-rich repeat-con 99.2 1.2E-10 4E-15 94.6 9.2 97 55-157 341-438 (440)
298 1epf_A NCAM, protein (neural c 99.2 5.8E-10 2E-14 79.7 11.7 96 55-153 2-100 (191)
299 2jll_A NCAM2, neural cell adhe 99.1 6E-10 2E-14 88.2 12.8 95 55-154 1-101 (389)
300 1zvo_C Myeloma immunoglobulin 99.1 1.3E-09 4.3E-14 90.3 15.2 145 7-152 294-505 (512)
301 2va4_A NCAM2, N-CAM 2, neural 99.1 2.2E-10 7.6E-15 81.8 9.1 93 55-154 2-96 (192)
302 3mtr_A N-CAM-1, NCAM-1, neural 99.1 7.6E-11 2.6E-15 86.3 6.8 42 7-49 17-58 (215)
303 3tv3_H PGT128 heavy chain, IG 99.1 5.6E-10 1.9E-14 83.3 11.3 81 68-150 153-235 (239)
304 1rhf_A Tyrosine-protein kinase 99.1 4.2E-10 1.4E-14 79.9 10.2 97 55-154 2-99 (182)
305 3to4_D NKT vbeta2 (mouse varia 99.1 4.7E-10 1.6E-14 84.3 10.8 70 70-140 139-218 (253)
306 2v44_A NCAM2, neural cell adhe 99.1 1.5E-09 5.3E-14 77.4 12.7 92 58-154 5-97 (189)
307 1ypz_F T-cell receptor gamma c 99.1 7E-10 2.4E-14 82.3 11.1 71 70-142 145-217 (230)
308 2iep_A Muscle-specific kinase 99.1 1.6E-10 5.6E-15 82.6 7.3 92 54-152 6-99 (192)
309 2eo1_A OBSCN protein, cDNA FLJ 99.1 5E-10 1.7E-14 72.4 9.0 83 63-155 19-101 (102)
310 1ow0_A IG alpha-1 chain C regi 99.1 4E-11 1.4E-15 88.1 4.1 131 9-141 3-200 (214)
311 2dru_A Chimera of CD48 antigen 99.1 1.2E-09 4E-14 78.3 11.4 63 69-147 114-176 (180)
312 3qhz_H Human monoclonal antibo 99.1 6.2E-10 2.1E-14 82.5 10.1 82 68-151 145-228 (232)
313 1bec_A 14.3.D T cell antigen r 99.1 1.5E-09 5.3E-14 80.7 12.3 72 69-141 135-212 (238)
314 1hnf_A CD2; T lymphocyte adhes 99.1 6.8E-10 2.3E-14 79.8 9.9 63 70-148 115-177 (182)
315 3bn9_D E2 FAB heavy chain; ant 99.1 2.7E-10 9.4E-15 86.2 7.8 79 68-148 146-226 (257)
316 3ojm_B Fibroblast growth facto 99.1 1.2E-10 4.1E-15 85.5 5.2 87 63-154 27-114 (231)
317 2wv3_A Neuroplastin; igcam, me 99.1 8.2E-10 2.8E-14 79.0 9.4 89 54-154 2-93 (190)
318 2c1o_A IGK-C protein; FAB frag 99.1 1.3E-09 4.4E-14 81.6 10.6 113 18-141 8-138 (254)
319 3u2s_H PG9 heavy chain; greek 99.1 1.3E-09 4.6E-14 81.9 10.5 81 68-150 154-236 (248)
320 3uto_A Twitchin; kinase, muscl 99.0 2E-09 6.9E-14 90.3 12.2 91 55-150 482-572 (573)
321 1oga_E TRBC1, T-cell receptor 99.0 9.9E-10 3.4E-14 82.5 9.3 73 69-142 137-219 (252)
322 1vca_A VCAM-D1,2, human vascul 99.0 2.6E-09 9E-14 77.7 11.2 86 65-158 11-96 (202)
323 3khq_A B-cell antigen receptor 99.0 1.9E-09 6.5E-14 73.5 9.7 92 57-154 19-119 (133)
324 3zyi_A Leucine-rich repeat-con 99.0 2.6E-10 8.8E-15 92.9 6.1 97 55-158 352-449 (452)
325 3n9g_H FAB fragment of MAB CR4 99.0 3E-09 1E-13 78.8 11.3 82 68-152 141-225 (230)
326 2vr9_A Roundabout 1, ROBO; imm 99.0 5.9E-10 2E-14 81.3 7.0 96 54-152 8-106 (217)
327 1f97_A Junction adhesion molec 99.0 2.2E-09 7.4E-14 77.7 9.8 95 56-158 2-109 (212)
328 1iam_A ICAM-1, CD54, intercell 99.0 2.2E-08 7.4E-13 72.0 14.7 120 12-140 2-166 (185)
329 3p2t_A Leukocyte immunoglobuli 99.0 5.5E-10 1.9E-14 80.6 6.1 92 54-153 4-97 (196)
330 1mqk_L Antibody 7E2 FV fragmen 99.0 3E-09 1E-13 71.1 9.3 97 58-158 4-115 (120)
331 3grw_A Fibroblast growth facto 99.0 6.7E-10 2.3E-14 82.2 6.5 86 63-153 23-109 (241)
332 2id5_A Lingo-1, leucine rich r 99.0 5.5E-10 1.9E-14 91.4 6.3 85 62-151 392-476 (477)
333 1zvo_C Myeloma immunoglobulin 99.0 9.7E-09 3.3E-13 84.9 13.7 74 68-142 310-387 (512)
334 1pko_A Myelin oligodendrocyte 99.0 5.6E-09 1.9E-13 71.3 10.3 94 59-153 10-122 (139)
335 3nl4_L Antigen binding fragmen 99.0 4.6E-09 1.6E-13 76.4 10.4 80 57-140 3-95 (213)
336 1mq8_A ICAM-1, intercellular a 99.0 2.1E-10 7.2E-15 88.4 3.2 141 6-154 82-284 (291)
337 1jhl_L IGG1-kappa D11.15 FV (l 99.0 4.9E-09 1.7E-13 68.5 9.4 78 58-139 4-94 (108)
338 2v5t_A NCAM2, N-CAM 2, neural 99.0 2.4E-09 8.2E-14 76.1 8.3 90 55-151 2-94 (189)
339 3sob_H Antibody heavy chain, l 98.9 1.4E-08 4.9E-13 76.3 12.4 81 68-151 167-250 (256)
340 3mlr_H Human monoclonal anti-H 98.9 6.3E-09 2.2E-13 76.9 10.3 76 69-147 143-221 (226)
341 3mjg_X Beta-type platelet-deri 98.9 6.2E-10 2.1E-14 84.7 4.7 124 10-152 1-178 (289)
342 4gos_A V-SET domain-containing 98.9 1.9E-09 6.6E-14 72.7 6.6 91 59-150 9-118 (125)
343 3k0w_A Mucosa-associated lymph 98.9 4.1E-09 1.4E-13 77.2 9.0 85 55-153 18-103 (218)
344 2xot_A Amphoterin-induced prot 98.9 2.6E-09 9.1E-14 84.5 8.0 83 63-154 254-339 (361)
345 2gi7_A GPVI protein; IG-like d 98.9 5.1E-09 1.8E-13 74.8 8.8 82 54-152 7-90 (184)
346 4fa8_A Secreted protein BARF1; 98.9 2.2E-09 7.6E-14 78.4 6.9 86 64-153 2-106 (203)
347 3mj8_L Stimulatory hamster ant 98.9 7.9E-09 2.7E-13 75.1 9.8 90 58-152 4-109 (213)
348 2v9r_A Roundabout homolog 1; p 98.9 1.8E-09 6.3E-14 78.1 6.3 98 54-152 8-109 (212)
349 1fnl_A Low affinity immunoglob 98.9 7.3E-09 2.5E-13 73.3 9.2 80 54-148 6-86 (175)
350 3sgj_C Human FCG3A receptor; r 98.9 4.4E-09 1.5E-13 76.6 8.0 80 55-151 7-87 (204)
351 2d3v_A Leukocyte immunoglobuli 98.9 1.8E-09 6E-14 77.9 5.7 92 54-153 4-97 (196)
352 3d9a_L Light chain of hyhel10 98.9 1.3E-08 4.6E-13 73.9 10.4 91 58-152 4-108 (213)
353 4f80_A Butyrophilin subfamily 98.9 2E-08 6.7E-13 73.9 11.0 94 61-155 10-122 (226)
354 3iu4_H CHP3 FAB heavy chain; a 98.9 3.2E-09 1.1E-13 80.5 6.9 78 69-149 141-221 (263)
355 3s96_B 3B5H10 FAB light chain; 98.9 1.2E-08 4.1E-13 74.3 9.6 91 57-152 3-116 (218)
356 3rrq_A Protein PD-1, programme 98.9 8.8E-09 3E-13 69.7 8.2 97 59-157 5-120 (129)
357 2y25_A Myomesin; structural pr 98.9 8.7E-09 3E-13 79.1 9.2 90 55-152 7-97 (317)
358 3rbs_A Myomesin-1; immunoglobu 98.9 1.3E-08 4.4E-13 74.4 9.7 80 63-147 10-90 (207)
359 3r06_A Anti-mouse CD3epsilon a 98.9 1.7E-08 5.7E-13 73.4 10.2 90 57-150 3-106 (213)
360 1zox_A CLM-1; IG-superfamily, 98.9 3.7E-08 1.3E-12 64.8 10.9 92 61-154 7-112 (113)
361 1f2q_A High affinity immunoglo 98.9 3.1E-09 1.1E-13 75.2 5.9 81 53-148 2-83 (176)
362 1mq8_A ICAM-1, intercellular a 98.9 1.3E-08 4.6E-13 78.3 9.8 136 12-155 2-189 (291)
363 1hng_A CD2; T lymphocyte adhes 98.9 3.4E-09 1.2E-13 75.4 6.0 88 64-158 5-105 (176)
364 1eaj_A Coxsackie virus and ade 98.9 4.6E-09 1.6E-13 69.8 6.1 90 61-152 11-125 (126)
365 2q20_A VK1 O18/O8 germline lig 98.9 1.7E-08 5.7E-13 66.1 8.7 78 57-138 5-95 (109)
366 2e27_L Anti-ciguatoxin antibod 98.9 1.7E-08 5.7E-13 67.4 8.8 78 57-138 5-95 (119)
367 1ugn_A LIR1, leukocyte immunog 98.9 2.2E-09 7.4E-14 77.5 4.7 94 54-155 4-100 (198)
368 1xau_A B- and T-lymphocyte att 98.9 3E-08 1E-12 64.2 9.4 88 63-151 22-115 (122)
369 3bn3_B ICAM-5, intercellular a 98.8 7.8E-08 2.7E-12 69.7 12.8 126 11-140 4-174 (196)
370 1nbq_A JAM, junctional adhesio 98.8 6.7E-09 2.3E-13 74.9 7.0 96 55-158 4-112 (209)
371 2qsq_A Carcinoembryonic antige 98.8 3E-08 1E-12 65.4 8.9 83 63-152 8-109 (111)
372 3q0h_A T cell immunoreceptor w 98.8 3.3E-08 1.1E-12 65.7 9.1 88 61-155 9-111 (117)
373 1i8k_A Epidermal growth factor 98.8 2.3E-08 7.8E-13 65.3 8.1 77 58-138 4-93 (107)
374 1qfw_M FV, antibody (anti beta 98.8 1.8E-08 6.1E-13 65.9 7.5 77 58-138 4-93 (108)
375 1lk3_L 9D7 light chain; antige 98.8 3.6E-08 1.2E-12 71.5 9.9 87 62-152 7-107 (210)
376 3jz7_A MCAR, CAR, coxsackievir 98.8 1.2E-08 4E-13 73.8 7.1 97 61-158 6-126 (214)
377 1uct_A Immunoglobulin alpha FC 98.8 1.3E-08 4.5E-13 74.9 7.5 91 54-152 8-102 (218)
378 1h5b_A Murine T cell receptor 98.8 1.6E-08 5.4E-13 66.7 7.1 81 58-140 4-95 (113)
379 3sob_L Antibody light chain; b 98.8 5.2E-08 1.8E-12 71.8 10.7 82 55-140 24-118 (237)
380 2or8_A Hepatitis A virus cellu 98.8 6.2E-09 2.1E-13 68.7 5.2 90 62-153 4-112 (116)
381 1gsm_A Madcam-1, mucosal addre 98.8 2.7E-08 9.2E-13 73.0 9.0 83 65-158 17-101 (210)
382 2ywz_A NEW antigen receptor va 98.8 5.5E-08 1.9E-12 63.9 9.6 78 58-137 3-87 (111)
383 2r15_A Myomesin-1; sarcomeric 98.8 5.3E-08 1.8E-12 70.4 10.4 79 68-151 15-94 (212)
384 4gjt_B Poliovirus receptor-rel 98.8 1.9E-08 6.5E-13 67.4 7.4 92 61-153 6-118 (123)
385 4ffy_L DENV1-E111 single chain 98.8 5E-08 1.7E-12 65.6 9.5 94 57-154 3-114 (126)
386 1nkr_A P58-CL42 KIR; inhibitor 98.8 2.5E-08 8.5E-13 72.1 8.6 95 54-154 7-106 (201)
387 4hwn_A FC receptor-like A; FCR 98.8 1.5E-08 5E-13 66.5 6.6 85 54-152 7-99 (108)
388 2fbo_J V1V2;, variable region- 98.8 1.5E-08 5.2E-13 75.2 7.4 89 60-153 7-132 (250)
389 2rgs_A I, IG gamma-2B heavy ch 98.8 4.3E-09 1.5E-13 77.4 4.2 87 55-142 9-102 (218)
390 1oll_A NK receptor; immune sys 98.8 1.7E-08 5.8E-13 72.3 7.3 89 55-152 4-95 (188)
391 3udw_C Poliovirus receptor; PV 98.8 4.7E-08 1.6E-12 64.2 9.0 90 63-154 8-118 (118)
392 3tv3_L PGT128 light chain, IG 98.8 2.8E-08 9.7E-13 72.1 8.5 82 64-151 9-105 (211)
393 2ifg_A High affinity nerve gro 98.8 3.6E-09 1.2E-13 83.1 3.8 95 54-155 157-252 (347)
394 3sbw_C Programmed cell death 1 98.8 2.8E-08 9.4E-13 72.5 8.3 95 61-157 7-120 (222)
395 2d9c_A Signal-regulatory prote 98.8 3.8E-08 1.3E-12 67.0 8.2 100 58-158 11-127 (136)
396 2vsd_A CHIR AB1; immune system 98.8 1.3E-08 4.4E-13 66.4 5.6 88 55-152 5-96 (105)
397 3u6r_L Antibody 1:7 (light cha 98.7 5.8E-08 2E-12 66.9 9.0 92 58-153 3-107 (143)
398 1jbj_A CD3 epsilon and gamma e 98.7 3.1E-08 1.1E-12 70.9 7.7 70 67-152 11-81 (186)
399 1ccz_A Protein (CD58); LFA-3, 98.7 2.2E-08 7.6E-13 70.9 6.7 92 64-158 4-100 (171)
400 2znx_A SCFV; fluorotryptohpan, 98.7 6.4E-08 2.2E-12 72.0 9.5 92 58-153 4-109 (242)
401 2yc1_B Single chain antibody f 98.7 2.2E-07 7.4E-12 64.3 11.3 96 55-154 16-125 (146)
402 1moe_A Anti-CEA MAB T84.66; an 98.7 5.8E-08 2E-12 71.8 9.0 92 58-153 4-113 (240)
403 3auv_A SC-DSFV derived from th 98.7 1.1E-07 3.6E-12 72.3 10.5 94 56-153 13-120 (276)
404 3ry4_A Low affinity immunoglob 98.7 4.7E-08 1.6E-12 68.4 7.9 78 55-147 4-82 (170)
405 1neu_A Myelin P0 protein; stru 98.7 5.4E-08 1.9E-12 64.7 7.9 93 61-155 5-122 (124)
406 3bkj_L WO2 IGG2A FAB fragment 98.7 1E-07 3.4E-12 71.3 10.2 94 55-152 34-146 (252)
407 4dzb_B Vbeta2 (MAIT T cell rec 98.7 1.2E-07 4.2E-12 70.4 10.5 80 58-140 4-101 (246)
408 3r4d_A CEA-related cell adhesi 98.7 8.6E-08 2.9E-12 69.1 9.4 90 62-158 6-114 (208)
409 1i3g_L Antibody FV fragment; a 98.7 6.4E-08 2.2E-12 63.6 7.9 78 57-138 6-96 (111)
410 1q0x_L FAB 9B1, light chain; a 98.7 1.2E-07 4.3E-12 68.7 10.2 85 62-150 7-108 (212)
411 1j05_L T84.66 antibody, anti-C 98.7 5.2E-08 1.8E-12 63.9 7.4 77 58-138 4-97 (111)
412 2vol_A Murine IGG FC; FC, zinc 98.7 1.1E-08 3.9E-13 74.4 4.5 75 67-142 15-94 (207)
413 1svz_A Immunoglobulin;, single 98.7 9.7E-08 3.3E-12 71.0 9.5 91 58-152 4-113 (247)
414 1xt5_A Variable region-contain 98.7 5.8E-08 2E-12 65.6 7.6 92 60-151 9-132 (135)
415 1ntl_A CRRY-IG; immunology, co 98.7 1.4E-07 4.7E-12 78.8 11.4 119 21-140 355-536 (551)
416 2coq_A NEW antigen receptor va 98.7 9.3E-08 3.2E-12 62.4 8.3 78 58-137 3-87 (108)
417 2or7_A T-cell immunoglobulin a 98.7 1.8E-08 6.3E-13 66.5 4.8 91 62-154 4-112 (115)
418 3moq_A NEW antigen receptor va 98.7 2.4E-07 8.3E-12 62.4 10.4 81 58-140 3-90 (126)
419 3pv7_A B7-H6, IG-like domain-c 98.7 1.6E-08 5.3E-13 75.4 4.9 94 61-155 9-121 (248)
420 2q87_A CMRF35-H antigen; all-b 98.7 4.9E-08 1.7E-12 63.9 6.5 86 63-150 4-106 (110)
421 2ptt_A CD48 antigen; CD244, CD 98.7 3.1E-08 1.1E-12 64.8 5.4 83 63-152 11-108 (110)
422 2oyp_A Hepatitis A virus cellu 98.7 1.9E-08 6.5E-13 65.4 4.3 85 64-150 3-106 (109)
423 3nfj_J T cell receptor beta ch 98.7 2.7E-07 9.3E-12 68.5 11.1 78 58-138 4-96 (245)
424 3knb_B Obscurin-like protein 1 98.7 2.9E-08 9.9E-13 64.9 5.1 44 7-50 11-54 (107)
425 3omz_A Human vdelta1 gamma del 98.7 3.5E-08 1.2E-12 74.1 6.1 95 56-152 3-118 (259)
426 3kg5_A B-cell antigen receptor 98.7 3.7E-07 1.3E-11 62.1 10.7 94 58-156 21-123 (134)
427 1sq2_N Novel antigen receptor; 98.7 1.5E-07 5E-12 62.1 8.4 79 58-138 3-88 (113)
428 2pet_A Lutheran blood group gl 98.7 7.2E-08 2.5E-12 70.6 7.7 98 61-158 6-120 (231)
429 3knb_A Titin; IG-like, titin, 98.7 1.9E-08 6.6E-13 64.9 4.0 43 8-50 4-46 (100)
430 1nfd_E H57 FAB; complex (immun 98.6 8.7E-08 3E-12 69.5 7.9 72 62-137 6-90 (212)
431 1i1c_A IGG2A, IG gamma-2A chai 98.6 2.3E-08 8E-13 74.6 4.9 76 67-142 29-108 (239)
432 3shs_A HOC head outer capsid p 98.6 1.6E-06 5.6E-11 65.5 14.7 116 10-141 3-170 (304)
433 3r08_E T-cell surface glycopro 98.6 1.7E-08 5.9E-13 62.7 3.4 59 63-137 7-66 (82)
434 3esu_F Antibody 14B7* light ch 98.6 2.1E-07 7.1E-12 69.3 10.0 92 57-152 6-111 (250)
435 2if7_A SLAM family member 6; N 98.6 6E-08 2.1E-12 69.8 6.8 94 62-155 5-109 (193)
436 2xzc_L FAB A.17 light chain; i 98.6 1.7E-07 6E-12 68.2 9.2 75 62-140 7-96 (216)
437 1eeq_A Kappa-4 immunoglobulin 98.6 1.3E-07 4.6E-12 62.2 7.8 77 58-138 4-99 (114)
438 3s97_C Contactin-1; carbonic a 98.6 2.7E-08 9.2E-13 71.2 4.6 78 61-143 14-93 (201)
439 2nms_A CMRF35-like-molecule 1; 98.6 3.8E-07 1.3E-11 61.2 10.0 96 61-158 8-117 (124)
440 2gjj_A A21 single-chain antibo 98.6 1.9E-07 6.5E-12 70.5 9.3 94 56-153 6-119 (264)
441 1dlf_L Anti-dansyl immunoglobu 98.6 2.4E-07 8.1E-12 60.9 8.4 77 58-138 4-98 (113)
442 1nko_A Sialic acid binding IG- 98.6 8.2E-08 2.8E-12 64.9 6.3 97 59-157 10-132 (132)
443 3u1s_H FAB PGT145 heavy chain; 98.6 3.7E-07 1.3E-11 69.1 10.5 78 69-149 182-262 (267)
444 1dr9_A B7-1 (CD80), T lymphocy 98.6 8.2E-08 2.8E-12 69.1 6.6 90 64-158 3-112 (201)
445 3tf7_C 42F3 MUT7 SCFV (42F3 al 98.6 4E-07 1.4E-11 68.2 10.6 83 56-140 4-100 (256)
446 1ncn_A T lymphocyte activation 98.6 2.5E-07 8.4E-12 60.4 8.3 78 65-148 4-101 (110)
447 2edo_A CD48 antigen; beta-sand 98.6 2.5E-08 8.6E-13 66.7 3.4 95 63-158 12-116 (121)
448 2zg1_A Sialic acid-binding IG- 98.6 1.3E-07 4.3E-12 68.6 7.4 96 61-158 6-128 (214)
449 2p1y_A Bispecific alpha/beta T 98.6 2E-07 6.9E-12 68.8 8.6 79 58-140 3-97 (238)
450 2kdg_A Myotilin; immonoglobuli 98.6 3.6E-08 1.2E-12 63.1 3.8 46 5-50 1-46 (100)
451 1c1e_H Catalytic antibody 1E9 98.6 3.8E-07 1.3E-11 66.5 9.8 77 62-140 7-103 (219)
452 1oaq_L Light chain; antibody, 98.6 3.4E-07 1.2E-11 60.8 8.8 87 64-154 9-112 (120)
453 4f9p_D 103.2 anti-BTN3A1 antib 98.6 4.9E-06 1.7E-10 61.7 15.6 77 59-139 141-230 (254)
454 2jju_A Signal regulatory prote 98.6 1.5E-07 5.2E-12 63.3 6.7 81 58-139 6-97 (127)
455 1l6x_A Immunoglobulin gamma-1 98.6 7.2E-08 2.5E-12 70.0 5.4 74 68-142 16-94 (207)
456 1x9q_A SCFV, 4M5.3 anti-fluore 98.6 2.2E-07 7.7E-12 70.1 8.3 94 55-152 15-127 (268)
457 2x1w_L Vascular endothelial gr 98.6 2E-07 7E-12 67.9 7.9 81 62-150 14-99 (213)
458 3bqu_C 3H6 FAB light chain; be 98.6 3.5E-08 1.2E-12 72.7 3.7 82 55-140 23-117 (233)
459 2ghw_B Anti-SARS SCFV antibody 98.6 1.4E-07 4.8E-12 70.1 7.0 89 63-153 10-120 (247)
460 1p6f_A NKP46, natural cytotoxi 98.6 1.6E-07 5.5E-12 70.2 7.4 90 54-152 6-98 (242)
461 1hnf_A CD2; T lymphocyte adhes 98.6 2.8E-07 9.7E-12 66.0 8.2 88 63-157 7-109 (182)
462 4ei6_B Vbeta16 XV19 type II na 98.6 5.9E-07 2E-11 66.6 10.3 76 58-137 5-97 (245)
463 1op3_H FAB 2G12, heavy chain; 98.6 6.7E-07 2.3E-11 65.7 10.5 77 62-140 7-103 (225)
464 1u2h_A APEG-1, aortic preferen 98.6 9.1E-08 3.1E-12 61.0 5.1 45 6-50 2-46 (99)
465 3mj6_A Junctional adhesion mol 98.6 4E-08 1.4E-12 73.8 3.9 94 56-151 6-121 (268)
466 1f3r_B FV antibody fragment; I 98.6 5.2E-07 1.8E-11 67.7 10.0 76 63-140 8-102 (257)
467 2v9t_A Roundabout homolog 1; s 98.5 6.5E-08 2.2E-12 63.9 4.4 47 4-50 4-50 (117)
468 4fmk_A Poliovirus receptor-rel 98.5 1.3E-07 4.3E-12 68.5 6.3 82 63-144 9-111 (225)
469 1b6u_A KIR2DL3, P58 killer cel 98.5 2.2E-07 7.4E-12 70.2 7.8 95 54-154 6-105 (257)
470 2dru_A Chimera of CD48 antigen 98.5 2.2E-07 7.4E-12 66.3 7.3 89 63-158 7-110 (180)
471 2j6e_L IGM, FAB light chain; a 98.5 1.7E-07 5.9E-12 68.9 7.0 75 62-140 26-115 (234)
472 3bik_B Programmed cell death p 98.5 5.2E-07 1.8E-11 61.3 8.8 98 58-157 12-128 (134)
473 3ux9_B SCFV antibody; five hel 98.5 2.8E-07 9.7E-12 68.8 8.2 89 62-154 9-115 (256)
474 3qp3_A Titin; I-SET IG-like, s 98.5 1.2E-07 4E-12 61.0 5.3 45 5-49 4-48 (103)
475 1q9r_B S25-2 FAB (IGG1K) heavy 98.5 3.1E-07 1.1E-11 67.1 8.2 77 62-140 7-105 (222)
476 3f8u_B Tapasin; endoplasmic re 98.5 1.5E-06 5E-11 69.5 12.6 79 69-147 306-399 (401)
477 2w59_A IGY FCU3-4; immunoglobu 98.5 6.5E-08 2.2E-12 71.7 4.5 94 55-148 12-109 (231)
478 1tvd_A T cell receptor, ES204 98.5 4.4E-07 1.5E-11 59.8 8.2 78 59-138 4-98 (116)
479 2aw2_A B and T lymphocyte atte 98.5 6.3E-07 2.1E-11 57.4 8.2 87 63-150 19-108 (120)
480 3bp6_A Programmed cell death p 98.5 1.5E-06 5.1E-11 57.5 10.7 92 59-152 3-113 (117)
481 1pew_A JTO2, A lambda-6 type i 98.5 5.7E-07 1.9E-11 58.7 8.5 74 62-138 7-94 (109)
482 1nez_G T-cell surface glycopro 98.5 1.5E-06 5.3E-11 58.5 10.8 40 7-46 2-41 (128)
483 2yr3_A Myosin light chain kina 98.5 8.5E-08 2.9E-12 61.3 4.3 46 4-49 6-51 (99)
484 1qok_A MFE-23 recombinant anti 98.5 5.6E-07 1.9E-11 68.5 9.6 78 61-140 32-129 (282)
485 3nl4_H Antigen binding fragmen 98.5 6.5E-07 2.2E-11 65.1 9.6 75 62-140 6-99 (215)
486 3b5h_A Cervical EMMPRIN, HAB18 98.5 6.9E-07 2.4E-11 63.1 9.4 75 65-154 8-84 (184)
487 1u3h_A T-cell receptor alpha-c 97.9 1.3E-08 4.3E-13 66.9 0.0 76 61-138 5-93 (110)
488 1nqb_A Single-chain antibody f 98.5 5.1E-07 1.7E-11 67.8 8.8 78 61-140 6-103 (256)
489 2edj_A Roundabout homolog 2; K 98.5 2.4E-07 8.1E-12 59.3 6.0 46 5-50 4-49 (100)
490 3juy_B 3B3 single chain varian 98.5 3.9E-07 1.3E-11 68.2 8.0 82 55-138 6-107 (256)
491 3o3u_N Maltose-binding peripla 98.5 1.5E-07 5.3E-12 78.5 6.2 89 63-158 374-475 (581)
492 3d9a_H Heavy chain of hyhel10 98.5 4.1E-07 1.4E-11 65.9 7.7 76 62-139 7-101 (210)
493 3gkz_A Anti-methamphetamine si 98.5 5.2E-07 1.8E-11 67.5 8.5 77 60-138 13-108 (257)
494 2i24_N NEW antigen receptor PB 98.5 1.3E-06 4.5E-11 58.3 9.6 78 58-137 3-87 (121)
495 2h32_A Immunoglobulin IOTA cha 98.5 1.4E-07 4.9E-12 63.5 4.8 92 62-155 7-118 (126)
496 1g1c_A Immunoglobulin-like dom 98.5 2E-07 6.7E-12 59.4 5.0 43 7-49 3-45 (99)
497 2fbj_H IGA-kappa J539 FAB (hea 98.5 9.9E-07 3.4E-11 64.6 9.4 88 63-152 8-118 (220)
498 3r0n_A Poliovirus receptor-rel 98.5 5.2E-07 1.8E-11 60.4 7.2 88 61-150 8-128 (128)
499 1fo0_A Protein (BM3.3 T cell r 98.5 7.2E-07 2.5E-11 58.9 7.5 77 59-137 4-95 (116)
500 4i0k_A CD276 antigen; immunogl 98.5 3.5E-08 1.2E-12 72.0 1.1 92 64-157 4-112 (222)
No 1
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.86 E-value=3.1e-20 Score=134.17 Aligned_cols=139 Identities=21% Similarity=0.319 Sum_probs=109.7
Q ss_pred ccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceEE-----------------------------------
Q psy16426 7 NVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEII----------------------------------- 51 (194)
Q Consensus 7 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~----------------------------------- 51 (194)
..+|.+...+.+..+.+|++++|.|.+.+.|.+.+.|++++..+.
T Consensus 3 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 82 (194)
T 2a38_A 3 TQAPTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKA 82 (194)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCCeEEccCCceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEE
Confidence 457899999999999999999999999999999999999864321
Q ss_pred --------------Ee---eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeE
Q psy16426 52 --------------AQ---VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKI 114 (194)
Q Consensus 52 --------------v~---~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (194)
|. .+|.+........+..|+.+.|.|.+.+.|.|.+.|++ ++..+....++.....+.
T Consensus 83 ~n~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~-~~~~~~~~~~~~~~~~~~---- 157 (194)
T 2a38_A 83 TNGSGQATSTAELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYR-DGAEIQSSLDFQISQEGD---- 157 (194)
T ss_dssp EETTEEEEEEEEEEEECCCEEEEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEEE-TTEECCCSSSEEEEEETT----
T ss_pred EcCCceEeEEEEEEEccCCCCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEEE-CCEECCCCCcEEEEEcCC----
Confidence 22 34444545555667889999999999999999999999 555555444443222221
Q ss_pred EEEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEc
Q psy16426 115 HMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYG 150 (194)
Q Consensus 115 ~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v 150 (194)
..+|.|.++..+|.|.|+|.|.|..|.....+.|.|
T Consensus 158 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 193 (194)
T 2a38_A 158 LYSLLIAEAYPEDSGTYSVNATNSVGRATSTAELLV 193 (194)
T ss_dssp EEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEEECCCChhcCeEEEEEEEeCCCceEEEEEEEE
Confidence 348999999999999999999999999888888876
No 2
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.84 E-value=6.3e-20 Score=132.99 Aligned_cols=139 Identities=23% Similarity=0.401 Sum_probs=107.2
Q ss_pred cCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceEE------------------------------------
Q psy16426 8 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEII------------------------------------ 51 (194)
Q Consensus 8 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~------------------------------------ 51 (194)
.+|.|...+.+..+.+|++++|.|.+.+.|.+.+.|++++..+.
T Consensus 3 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 82 (197)
T 2j8h_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRAT 82 (197)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEE
T ss_pred CCCEEEEcCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEE
Confidence 58999999999999999999999999999999999999764321
Q ss_pred -------------EeeCCeEEec-----cceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCcee
Q psy16426 52 -------------AQVPPMIWIQ-----NQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYK 113 (194)
Q Consensus 52 -------------v~~~p~i~~~-----~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~ 113 (194)
|..+|.+... .....+..|+.+.|.|.+.+.|.|.+.|++ ++..+....++.......
T Consensus 83 n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~-~~~~~~~~~~~~~~~~~~--- 158 (197)
T 2j8h_A 83 NQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQK-GQDLIDNNGHYQVIVTRS--- 158 (197)
T ss_dssp ETTEEEEEEEEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEE-SSCEECSSSSCEEEECSS---
T ss_pred ECCCceeEEEEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEE-CCEEeecCCCEEEEEcCC---
Confidence 2222222111 123446779999999999999999999999 555554444444322222
Q ss_pred EEEEEEEee-cCCCCCeEEEEEEEcCCCceEEEEEEEcc
Q psy16426 114 IHMKLTIKA-VTKQDFGAYKCVSKNSLGDTDGSIKLYGK 151 (194)
Q Consensus 114 ~~~~L~i~~-~~~~d~g~y~C~a~n~~g~~~~~~~l~v~ 151 (194)
.+.|.|.+ +..+|.|.|+|.|.|..|.....+.|.|.
T Consensus 159 -~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 196 (197)
T 2j8h_A 159 -FTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVA 196 (197)
T ss_dssp -EEEEECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred -ceEEEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEEe
Confidence 46899999 99999999999999999999888888775
No 3
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.84 E-value=5.7e-19 Score=127.53 Aligned_cols=140 Identities=25% Similarity=0.388 Sum_probs=105.7
Q ss_pred ccCCeEEEcCCeeeeeC-CCcEEEEeeeeccCC--ceeEEEecCceEE--------------------------------
Q psy16426 7 NVPPMIWIQNQLVGAME-GDQMTLECHSEAYPK--SINYWTKENGEII-------------------------------- 51 (194)
Q Consensus 7 ~~~P~~~~~~~~~~v~~-G~~v~L~C~~~g~p~--~~v~W~k~~~~l~-------------------------------- 51 (194)
+.||.|...+. ..+.+ |++++|.|.+.+.+. +.+.|++++..+.
T Consensus 1 Q~~P~i~~~~~-~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~ 79 (190)
T 2wv3_A 1 QNEPRIVTSEE-VIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNASNMEYRINKPRAEDSGEYHCVYHFVS 79 (190)
T ss_dssp --CCEEEECCC-EECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCCSEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCCCcccccce-EEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccceEeccEEEEEecCCcccCEEEEEEEEeCC
Confidence 46899887554 55666 999999999998876 8999999875432
Q ss_pred ---------EeeCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEec-CcEEee---CCCceeEEecCCceeEEEEE
Q psy16426 52 ---------AQVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKE-NGEIIA---QGSKYEPILLDNAYKIHMKL 118 (194)
Q Consensus 52 ---------v~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~L 118 (194)
|..+|.+...+....+..|+.+.|.|.+.+.|.|.+.|+++ ++.... ...++.... +.. .+.|
T Consensus 80 ~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~-~~~---~~~L 155 (190)
T 2wv3_A 80 APKANATIEVKAAPDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIIN-KEN---YTEL 155 (190)
T ss_dssp EEEEEEEEEEECCCEEEEECSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEEE-CSS---EEEE
T ss_pred cccccEEEEEecCCcccccCCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEec-CCC---eeEE
Confidence 45577777666677788999999999999999999999984 333332 233333222 111 3589
Q ss_pred EEeecC-CCCCeEEEEEEEcCCCceEEEEEEEcc
Q psy16426 119 TIKAVT-KQDFGAYKCVSKNSLGDTDGSIKLYGK 151 (194)
Q Consensus 119 ~i~~~~-~~d~g~y~C~a~n~~g~~~~~~~l~v~ 151 (194)
.|.++. .+|.|.|+|.|.|..|.....+.|.|.
T Consensus 156 ~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 156 NIVNLQITEDPGEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp EECSCCTTTSCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred EEEeccccCCCEEEEEEEEecCCcceeEEEEEEE
Confidence 999999 799999999999999999888877763
No 4
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.84 E-value=6.5e-19 Score=134.53 Aligned_cols=146 Identities=23% Similarity=0.375 Sum_probs=114.6
Q ss_pred ccccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceEE---------------------------------
Q psy16426 5 GQNVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEII--------------------------------- 51 (194)
Q Consensus 5 ~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~--------------------------------- 51 (194)
|+..||.|...+.++.+.+|++++|.|.+.+.|.+.+.|++++..+.
T Consensus 1 g~~~pP~~~~~p~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~ 80 (284)
T 2rik_A 1 GAMAPPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYA 80 (284)
T ss_dssp -CCCCCEEEECCCCEEEETTCCEEEEEEEESSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCcCCCEEEccccceEecCCCcEEEEEEEEcCCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEE
Confidence 45789999999999999999999999999999999999999865431
Q ss_pred --------------EeeCCeEEec-cceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEE
Q psy16426 52 --------------AQVPPMIWIQ-NQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHM 116 (194)
Q Consensus 52 --------------v~~~p~i~~~-~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (194)
|..+|.+... .....+.+|+.+.|.|.+.+.|.+.+.|++ ++........+....... ..
T Consensus 81 ~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~-~~~~~~~~~~~~~~~~~~----~~ 155 (284)
T 2rik_A 81 SNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYK-DETEIQESSKFRMSFVES----VA 155 (284)
T ss_dssp EETTEEEEEEEEEEEECCCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEE-TTEECCCSSSEEEEEETT----EE
T ss_pred EECCceEEEEEEEEccCCCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEE-CCEECcCCCcEEEEEcCC----EE
Confidence 4445654433 234457789999999999999999999999 555554444443222222 46
Q ss_pred EEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEcccCCC
Q psy16426 117 KLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGKKKKK 155 (194)
Q Consensus 117 ~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~p~ 155 (194)
.|.|.++..+|.|.|+|.+.|..|.....+.|.|...|.
T Consensus 156 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 194 (284)
T 2rik_A 156 VLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPV 194 (284)
T ss_dssp EEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCB
T ss_pred EEEECCCCcccCEEEEEEEEcCCCceeEEEEEEEecCCc
Confidence 899999999999999999999999888888888876553
No 5
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.83 E-value=1.2e-19 Score=151.94 Aligned_cols=145 Identities=21% Similarity=0.338 Sum_probs=117.9
Q ss_pred cccccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceEE--------------------------------
Q psy16426 4 QGQNVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEII-------------------------------- 51 (194)
Q Consensus 4 ~~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~-------------------------------- 51 (194)
+.|..+|.+...+.+..+.+|++++|.|.+.|.|.+.+.|++++..+.
T Consensus 379 l~V~~~P~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 458 (570)
T 3b43_A 379 LKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCK 458 (570)
T ss_dssp ECEECCCEECSCCCCEEECTTCCEEEEEEEESSSSCCCEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred EEecCCCeeecCCCceeecCCCEEEEEEEEecCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhhCEEEEEE
Confidence 557789999888888889999999999999999999999999875431
Q ss_pred ---------------EeeCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEE
Q psy16426 52 ---------------AQVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHM 116 (194)
Q Consensus 52 ---------------v~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (194)
|..+|.+........+..|+.+.|.|.+.|.|++.+.|+++++.+.....++.....++ .+
T Consensus 459 A~N~~G~~~~~~~l~v~~~P~~~~~~~~~~~~~g~~~~l~c~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~----~~ 534 (570)
T 3b43_A 459 ASNDVGSDTCVGSITLKAPPRFVKKLSDISTVVGEEVQLQATIEGAEPISVAWFKDKGEIVRESDNIWISYSEN----IA 534 (570)
T ss_dssp EECSSCEEEEEEEEEECCCCEEEECCCCBCCBTTCCEEEEEEEESCSSCCCEEEETTEECCCCTTTEEECCCSS----EE
T ss_pred EEECCCeEEEEEEEEeccCCcccccCCCceecCCCeEEEEEEEecCCCCEEEEEeCCeEeccCCCeEEEEECCC----EE
Confidence 45677777666667778899999999999999999999995445544444443222222 46
Q ss_pred EEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEccc
Q psy16426 117 KLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGKK 152 (194)
Q Consensus 117 ~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~ 152 (194)
+|.|.++..+|.|.|+|.|.|..|...+...|.|.+
T Consensus 535 ~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~a~L~V~e 570 (570)
T 3b43_A 535 TLQFSRAEPANAGKYTCQIKNEAGTQECFATLSVLE 570 (570)
T ss_dssp EEEESSCCTTCCEEEEEEEECSSCEEEEEEEECCBC
T ss_pred EEEECcCCHHHCEEEEEEEEECCcEEEEEEEEEEeC
Confidence 999999999999999999999999999999998753
No 6
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.83 E-value=2.5e-19 Score=129.44 Aligned_cols=142 Identities=18% Similarity=0.230 Sum_probs=109.2
Q ss_pred cccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceEE----------------------------------
Q psy16426 6 QNVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEII---------------------------------- 51 (194)
Q Consensus 6 v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~---------------------------------- 51 (194)
+..+|.+...+.++.+.+|++++|.|.+.+.|.+.+.|++++..+.
T Consensus 4 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 83 (197)
T 3lcy_A 4 SGEAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIAT 83 (197)
T ss_dssp CCEEEEEEECCCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEE
T ss_pred cCCCCcccccCCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEE
Confidence 4678999999999999999999999999999999999999876542
Q ss_pred -------------EeeCCeEEe---ccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEE
Q psy16426 52 -------------AQVPPMIWI---QNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIH 115 (194)
Q Consensus 52 -------------v~~~p~i~~---~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (194)
|..+|.+.. ......+..|+.+.|.|.+.+.|.|.+.|++ ++..+.....+.....+. .
T Consensus 84 n~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~-~~~~~~~~~~~~~~~~~~----~ 158 (197)
T 3lcy_A 84 NEVGEVETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFH-GQKLLQNSENITIENTEH----Y 158 (197)
T ss_dssp CSSCEEEEEEEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEE-TTEECCCCSSEEEEECSS----E
T ss_pred CCCCceeEEEEEEEEcCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeE-CCEECCCCCceEEEEcCC----E
Confidence 222222221 1133456789999999999999999999999 566555544443222221 3
Q ss_pred EEEEEeecCC-CCCeEEEEEEEcCCCceEEEEEEEccc
Q psy16426 116 MKLTIKAVTK-QDFGAYKCVSKNSLGDTDGSIKLYGKK 152 (194)
Q Consensus 116 ~~L~i~~~~~-~d~g~y~C~a~n~~g~~~~~~~l~v~~ 152 (194)
+.|.|.++.. +|.|.|+|.+.|..|.....+.|.|.+
T Consensus 159 ~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 196 (197)
T 3lcy_A 159 THLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVEIQD 196 (197)
T ss_dssp EEEEESSCCHHHHCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred EEEEEccccchhhCceEEEEEEcCcCceEEEEEEEEec
Confidence 6899999985 899999999999999999888888754
No 7
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.83 E-value=4.4e-20 Score=133.21 Aligned_cols=140 Identities=29% Similarity=0.429 Sum_probs=108.3
Q ss_pred cccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceEE----------------------------------
Q psy16426 6 QNVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEII---------------------------------- 51 (194)
Q Consensus 6 v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~---------------------------------- 51 (194)
+..+|.|...+.++.+.+|++++|.|.+.+.|.+.+.|++++..+.
T Consensus 4 ~~~~P~i~~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 83 (192)
T 2iep_A 4 LPKAPVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENGQLLTILSVEDSDDGIYCCTANN 83 (192)
T ss_dssp CCEEEEESSCCCEEEEETTSCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEEGGGTEEEESSCCGGGCEEEEEEEEC
T ss_pred cCCCceeecCccceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEcCCccEEEEcCCCcccCeEEEEEEEc
Confidence 4678889888888899999999999999999999999999864421
Q ss_pred -------------EeeCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEE
Q psy16426 52 -------------AQVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKL 118 (194)
Q Consensus 52 -------------v~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 118 (194)
|..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++ ++.......++. .... +.|
T Consensus 84 ~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~-~~~~~~~~~~~~--~~~~-----~~L 155 (192)
T 2iep_A 84 GVGGAVESCGALQVKMKPKITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIK-GDSALRENSRIA--VLES-----GSL 155 (192)
T ss_dssp SSSCCEEEEEEEEEEEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEE-TTEECCCCSSEE--ECTT-----SCE
T ss_pred CCCceeEeEEEEEEEeCCccccCCcceEEeCCCcEEEEEEEeccCCceEEEEe-CCEEccCCCcEE--EecC-----CcE
Confidence 3344555555556667889999999999999999999999 555554443332 2222 279
Q ss_pred EEeecCCCCCeEEEEEEEcCCCceE-EEEEEEcccC
Q psy16426 119 TIKAVTKQDFGAYKCVSKNSLGDTD-GSIKLYGKKK 153 (194)
Q Consensus 119 ~i~~~~~~d~g~y~C~a~n~~g~~~-~~~~l~v~~~ 153 (194)
.|.++..+|.|.|+|.+.|..|... ..+.|.|..+
T Consensus 156 ~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~p 191 (192)
T 2iep_A 156 RIHNVQKEDAGQYRCVAKNSLGTAYSKLVKLEVEVF 191 (192)
T ss_dssp EESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC-
T ss_pred EEecCChhhCEEEEEEEEcCCCcEEEEEEEEEEEeC
Confidence 9999999999999999999998874 3577776554
No 8
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.82 E-value=4.7e-19 Score=130.28 Aligned_cols=141 Identities=20% Similarity=0.313 Sum_probs=104.4
Q ss_pred cccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceEE----------------------------------
Q psy16426 6 QNVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEII---------------------------------- 51 (194)
Q Consensus 6 v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~---------------------------------- 51 (194)
+..||.|...+.+..+.+|+++.|.|.+.|.|.+.+.|++++..+.
T Consensus 3 ~~~~P~~~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~ 82 (212)
T 2yd6_A 3 GETPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECV 82 (212)
T ss_dssp -CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEE
T ss_pred CCCCCeEEeCcceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEE
Confidence 3578999999999999999999999999999999999999864321
Q ss_pred ---------------EeeC-------CeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCC---CceeEE
Q psy16426 52 ---------------AQVP-------PMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQG---SKYEPI 106 (194)
Q Consensus 52 ---------------v~~~-------p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~---~~~~~~ 106 (194)
|..+ |.+...+....+..|+.+.|.|.+.+.|.|.+.|++ ++..+... .++...
T Consensus 83 a~n~~g~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~-~g~~l~~~~~~~~~~~~ 161 (212)
T 2yd6_A 83 ASNNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFK-DFLPVDTSNNNGRIKQL 161 (212)
T ss_dssp EEETTEEEEEEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEE-TTEEC------CCEEEE
T ss_pred EEcCCCcEEEEEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCCCeEEEEE-CCccccCcCCCceEEEE
Confidence 2211 444444455567789999999999999999999999 55444322 222211
Q ss_pred ecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEE-EEEEEcc
Q psy16426 107 LLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDG-SIKLYGK 151 (194)
Q Consensus 107 ~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~-~~~l~v~ 151 (194)
.... .+.|.|.++..+|.|.|+|.|.|..|...+ ...|.+.
T Consensus 162 ~~~~----~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~ 203 (212)
T 2yd6_A 162 RSES----IGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVR 203 (212)
T ss_dssp EETT----EEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred ecCC----eEEEEEcCCCcccCEEEEEEEECCCCccccccccEEEE
Confidence 1111 469999999999999999999999998764 3455443
No 9
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.82 E-value=5e-19 Score=130.05 Aligned_cols=143 Identities=25% Similarity=0.409 Sum_probs=107.7
Q ss_pred ccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceEE-----------------------------------
Q psy16426 7 NVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEII----------------------------------- 51 (194)
Q Consensus 7 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~----------------------------------- 51 (194)
..||.|...+.+..+.+|++++|.|.+.+.|.+.+.|++++..+.
T Consensus 4 ~~pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~ 83 (212)
T 2yd1_A 4 AHPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECV 83 (212)
T ss_dssp -CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEE
T ss_pred CCCCEEEcCCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEE
Confidence 368999999999999999999999999999999999999764431
Q ss_pred ----------------EeeC-------CeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeC-CCceeEEe
Q psy16426 52 ----------------AQVP-------PMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQ-GSKYEPIL 107 (194)
Q Consensus 52 ----------------v~~~-------p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~-~~~~~~~~ 107 (194)
|..+ |.+...+....+..|+.+.|.|.+.+.|.+.+.|++ ++..+.. ..++. .
T Consensus 84 ~~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~-~~~~~~~~~~~~~--~ 160 (212)
T 2yd1_A 84 AENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIK-NQTKVDMSNPRYS--L 160 (212)
T ss_dssp EECSSSCEEEEEEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEECSSCCEEEEEE-TTEECCTTSTTEE--E
T ss_pred EEeCCCCeEEeeEEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEeccCCCCeEEEEE-CCeEcccCCCeEE--c
Confidence 2222 444444455567789999999999999999999999 4544433 22321 1
Q ss_pred cCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEE-EEEEcccCCCCCh
Q psy16426 108 LDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGS-IKLYGKKKKKKKK 158 (194)
Q Consensus 108 ~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~-~~l~v~~~p~~p~ 158 (194)
.+ +.|.|.++..+|.|.|+|.|.|..|...+. +.|.|...+..+.
T Consensus 161 ~~------~~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~~~~~~~ 206 (212)
T 2yd1_A 161 KD------GFLQIENSREEDQGKYECVAENSMGTEHSKATNLYVKVRRVGTK 206 (212)
T ss_dssp ET------TEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC---C--
T ss_pred cC------CeEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEEecccccc
Confidence 12 289999999999999999999999988764 7888877766554
No 10
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.82 E-value=6.1e-19 Score=134.70 Aligned_cols=143 Identities=22% Similarity=0.383 Sum_probs=111.7
Q ss_pred cccccCCeEEEcCC-eeeeeCCCcEEEEeeeeccCCceeEEEecCceEE-------------------------------
Q psy16426 4 QGQNVPPMIWIQNQ-LVGAMEGDQMTLECHSEAYPKSINYWTKENGEII------------------------------- 51 (194)
Q Consensus 4 ~~v~~~P~~~~~~~-~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~------------------------------- 51 (194)
+.|..+|.+...+. ...+.+|+++.|.|.+.|.|.+.+.|++++..+.
T Consensus 93 l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 172 (284)
T 2rik_A 93 LGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTC 172 (284)
T ss_dssp EEEECCCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCSSSEEEEEETTEEEEEECSCCGGGCEEEEE
T ss_pred EEccCCCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEECCCCcccCEEEEE
Confidence 45677888776654 4568899999999999999999999999875432
Q ss_pred ----------------EeeCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEE
Q psy16426 52 ----------------AQVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIH 115 (194)
Q Consensus 52 ----------------v~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (194)
|..+|.+...+....+..|+.+.|.|.+.+.|.|.+.|++ ++..+....++.....+. .
T Consensus 173 ~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~-~~~~~~~~~~~~~~~~~~----~ 247 (284)
T 2rik_A 173 EAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHK-DKRELRSGKKYKIMSENF----L 247 (284)
T ss_dssp EEECSSCEEEEEEEEEEECCCBCCSCCCCEEECTTCCEEEEEECBSSSCCEEEEEE-TTEEECBTTTEEEEEETT----E
T ss_pred EEEcCCCceeEEEEEEEecCCcceeCCCcceecCCCeEEEEEEEEecCCCEEEEEE-CCEECcCCCCEEEEEcCC----E
Confidence 4445655545555667889999999999999999999999 555555554544322221 4
Q ss_pred EEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEcc
Q psy16426 116 MKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGK 151 (194)
Q Consensus 116 ~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~ 151 (194)
+.|.|.++..+|.|.|+|.|.|..|...+.+.|.|.
T Consensus 248 ~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 283 (284)
T 2rik_A 248 TSIHILNVDSADIGEYQCKASNDVGSYTCVGSITLK 283 (284)
T ss_dssp EEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEEEEcCCCcccCEEEEEEEEeCCCceeEEEEEEEc
Confidence 589999999999999999999999999988888774
No 11
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.82 E-value=3.8e-19 Score=127.83 Aligned_cols=137 Identities=23% Similarity=0.411 Sum_probs=101.8
Q ss_pred cCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceEE------------------------------------
Q psy16426 8 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEII------------------------------------ 51 (194)
Q Consensus 8 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~------------------------------------ 51 (194)
.+|.|...+.+..+.+|++++|.|.+.+.|.+.+.|++++..+.
T Consensus 1 s~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~ 80 (189)
T 2v5t_A 1 SMLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEA 80 (189)
T ss_dssp CCCEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEECTTSCEEETTCCGGGCEEEEEEEEETT
T ss_pred CCceeeccCCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEecCCCEEEeeCCHhHCcEEEEEEEEcC
Confidence 36889999999999999999999999999999999999865432
Q ss_pred ------------EeeCCeEEeccc--eeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEE
Q psy16426 52 ------------AQVPPMIWIQNQ--LVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMK 117 (194)
Q Consensus 52 ------------v~~~p~i~~~~~--~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (194)
+..+|.+..... ...+..|+.+.|.|.+.+.|.+.+.|++ ++........+. ...+. +.
T Consensus 81 ~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~-~g~~~~~~~~~~-~~~~~-----~~ 153 (189)
T 2v5t_A 81 RGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFR-NGKLIEENEKYI-LKGSN-----TE 153 (189)
T ss_dssp TTEEEEEEEEEEEEEEEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEE-TTEECCCSSSEE-EETTT-----TE
T ss_pred CCceEEEEEEEEecCCCCcccccccccccccCCCcEEEEEEEccCCCCeEEEEE-CCEECcCCCcEE-EecCC-----CE
Confidence 222333332222 2334579999999999999999999999 565555444433 12222 38
Q ss_pred EEEeecCCCCCeEEEEEEEcCCCceEEEEEEEcc
Q psy16426 118 LTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGK 151 (194)
Q Consensus 118 L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~ 151 (194)
|.|.++..+|.|.|+|.|.|..|.....+.|.|.
T Consensus 154 L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 187 (189)
T 2v5t_A 154 LTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVF 187 (189)
T ss_dssp EEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEcCCChhhCeeEEEEEEeCCCceeEEEEEEEE
Confidence 9999999999999999999999998888777764
No 12
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.81 E-value=1.3e-18 Score=134.21 Aligned_cols=146 Identities=22% Similarity=0.382 Sum_probs=111.8
Q ss_pred cCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceEE------------------------------------
Q psy16426 8 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEII------------------------------------ 51 (194)
Q Consensus 8 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~------------------------------------ 51 (194)
.+|.|...+.++.+.+|++++|.|.+.|.|.+.+.|++++..+.
T Consensus 3 ~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 82 (305)
T 2nzi_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRAT 82 (305)
T ss_dssp CCCEEEECCCCEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEEE
T ss_pred CCCeeeecccceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEEE
Confidence 58999999999999999999999999999999999999764321
Q ss_pred -------------EeeCCeEEec-----cceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCcee
Q psy16426 52 -------------AQVPPMIWIQ-----NQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYK 113 (194)
Q Consensus 52 -------------v~~~p~i~~~-----~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~ 113 (194)
|..+|.+... .....+..|+.+.|.|.+.+.|.+.+.|++ ++..+....++.......
T Consensus 83 n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~-~~~~~~~~~~~~~~~~~~--- 158 (305)
T 2nzi_A 83 NQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQK-GQDLIDNNGHYQVIVTRS--- 158 (305)
T ss_dssp ETTEEEEEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEE-SSSBCCSSSSCEEEECSS---
T ss_pred cCCCCccceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEE-CCEECCCCCcEEEEEcCC---
Confidence 1222222111 123446679999999999999999999999 554444444443222222
Q ss_pred EEEEEEEee-cCCCCCeEEEEEEEcCCCceEEEEEEEcccCCCCCh
Q psy16426 114 IHMKLTIKA-VTKQDFGAYKCVSKNSLGDTDGSIKLYGKKKKKKKK 158 (194)
Q Consensus 114 ~~~~L~i~~-~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~p~~p~ 158 (194)
..+|.|.+ +...|.|.|+|.|.|..|.....+.|.|...|..|.
T Consensus 159 -~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~p~ 203 (305)
T 2nzi_A 159 -FTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDPPR 203 (305)
T ss_dssp -EEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCCCCCE
T ss_pred -ceEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCCCCCC
Confidence 45899999 999999999999999999999999999888777664
No 13
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.81 E-value=1.9e-18 Score=144.71 Aligned_cols=146 Identities=23% Similarity=0.393 Sum_probs=115.7
Q ss_pred cccccCCeEEEcCC-eeeeeCCCcEEEEeeeeccCCceeEEEecCceEE-------------------------------
Q psy16426 4 QGQNVPPMIWIQNQ-LVGAMEGDQMTLECHSEAYPKSINYWTKENGEII------------------------------- 51 (194)
Q Consensus 4 ~~v~~~P~~~~~~~-~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~------------------------------- 51 (194)
+.|..+|.+..... ...+.+|+++.|.|.+.|.|.+.+.|++++..+.
T Consensus 285 l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 364 (570)
T 3b43_A 285 LGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTC 364 (570)
T ss_dssp ECCBCCCEEEECCCSBCCEESSCEEEEEEEEESSSSCEEEEEETTEECCCSSSEEEEEETTEEEEEEESCCGGGCEEEEE
T ss_pred EEeecCCcccccCCCccEEcCCCcEEEEEEEeeCCCCEEEEeECCEECCCCCcEEEEEECCEEEEEECCCCcccCEEEEE
Confidence 56778898876654 3457899999999999999999999999875431
Q ss_pred ----------------EeeCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEE
Q psy16426 52 ----------------AQVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIH 115 (194)
Q Consensus 52 ----------------v~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (194)
|..+|.+...+....+.+|+++.|.|.+.|.|.|.+.|++ ++..+..+.++.... ++. .
T Consensus 365 ~a~N~~g~~~~~~~l~V~~~P~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~v~W~k-~g~~l~~~~~~~~~~-~~~---~ 439 (570)
T 3b43_A 365 EAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHK-DKRELRSGKKYKIMS-ENF---L 439 (570)
T ss_dssp EEEBTTBCCEEEEEECEECCCEECSCCCCEEECTTCCEEEEEEEESSSSCCCEEEE-TTEECCSSSSEEEEE-ETT---E
T ss_pred EEEeCCCEEEEEEEEEecCCCeeecCCCceeecCCCEEEEEEEEecCCCCEEEEEE-CCEECcCCCCEEEEE-cCC---E
Confidence 5567777666666777889999999999999999999999 565555554544322 221 3
Q ss_pred EEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEcccCC
Q psy16426 116 MKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGKKKK 154 (194)
Q Consensus 116 ~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~p 154 (194)
.+|.|.++..+|.|.|+|.|.|..|...+...|.|..+|
T Consensus 440 ~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v~~~P 478 (570)
T 3b43_A 440 TSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLKAPP 478 (570)
T ss_dssp EEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECCCC
T ss_pred EEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEeccCC
Confidence 589999999999999999999999999888888776554
No 14
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.80 E-value=9.3e-19 Score=129.37 Aligned_cols=134 Identities=18% Similarity=0.232 Sum_probs=103.1
Q ss_pred ccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceEE-----------------------------------
Q psy16426 7 NVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEII----------------------------------- 51 (194)
Q Consensus 7 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~----------------------------------- 51 (194)
...+.|...+.++.+.+|++++|.|.+.+.|.+.+.|++++..+.
T Consensus 16 ~~~~~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~s~~ 95 (218)
T 3k0w_A 16 PRGSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNGNTSELIFNAVHVKDAGFYVCRVNNNFTFEFSQW 95 (218)
T ss_dssp ---CCEEECCCCEEEETTSBEEEECEETTTTSSEEEEEETTEECTTCCSSEEEETTCCGGGCEEEEEEEECTTCCEECCC
T ss_pred CCCCEEEECCCCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCCCCCCEEEEccCChhhCeEeEEEEEcCCCCceeeE
Confidence 466889999999999999999999999999999999999876542
Q ss_pred ----EeeC---------------CeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCce
Q psy16426 52 ----AQVP---------------PMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAY 112 (194)
Q Consensus 52 ----v~~~---------------p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~ 112 (194)
|... |.+...+....+..|+.+.|.|.+.+.|.+.+.|++ ++.......
T Consensus 96 ~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~-~~~~~~~~~----------- 163 (218)
T 3k0w_A 96 SQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFK-NELPLTHET----------- 163 (218)
T ss_dssp EEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEEBSSCCEEEEEE-TTEECTTCC-----------
T ss_pred EEEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEecccCCCeEEEEE-CCEECCCCC-----------
Confidence 2222 444545556667889999999999999999999999 554443221
Q ss_pred eEEEEEEEeecCCCCCeEEEEEEEcCCCce-EEEEEEEcccCC
Q psy16426 113 KIHMKLTIKAVTKQDFGAYKCVSKNSLGDT-DGSIKLYGKKKK 154 (194)
Q Consensus 113 ~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~-~~~~~l~v~~~p 154 (194)
...|.|.++..+|.|.|+|.|.|..|.. ...+.|.|...+
T Consensus 164 --~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~~ 204 (218)
T 3k0w_A 164 --KKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDELN 204 (218)
T ss_dssp --SSEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEECC--
T ss_pred --CCEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEEeCCc
Confidence 1389999999999999999999988874 456777776543
No 15
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.80 E-value=4e-18 Score=122.73 Aligned_cols=138 Identities=25% Similarity=0.357 Sum_probs=101.9
Q ss_pred cCCeEEEcCC--eeeeeCCCcEEEEeeeeccCCceeEEEecCceEE----------------------------------
Q psy16426 8 VPPMIWIQNQ--LVGAMEGDQMTLECHSEAYPKSINYWTKENGEII---------------------------------- 51 (194)
Q Consensus 8 ~~P~~~~~~~--~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~---------------------------------- 51 (194)
.||.+...+. ++.+.+|++++|.|.+.+.|.+.+.|++++..+.
T Consensus 1 spP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~ 80 (192)
T 2va4_A 1 SMPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNK 80 (192)
T ss_dssp CCCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEETTEECCCSSSEEEETTTTEEEECSCCGGGCEEEEEEEEET
T ss_pred CCCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEEeCCeeEEEEecCChhcCcEEEEEEEcc
Confidence 4788887765 4678889999999999999999999999875432
Q ss_pred -----------EeeCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecC-cEEeeCC-----CceeEEecCCceeE
Q psy16426 52 -----------AQVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKEN-GEIIAQG-----SKYEPILLDNAYKI 114 (194)
Q Consensus 52 -----------v~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~-~~~~~~~-----~~~~~~~~~~~~~~ 114 (194)
|..+|.+... ....+..|+.+.|.|.+.+.|.+.+.|++++ +...... .++...... .
T Consensus 81 ~~~~~~~~~l~V~~~p~~~~~-~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 155 (192)
T 2va4_A 81 AGEDEKQAFLQVFVQPHIIQL-KNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQH----G 155 (192)
T ss_dssp TEEEEEEEEEEEEEEEEEEEE-CCEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEET----T
T ss_pred ccccceEEEEEEEccCccccc-CcceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEeecc----C
Confidence 3334444322 2334567999999999999999999999853 3333221 122211111 1
Q ss_pred EEEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEc
Q psy16426 115 HMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYG 150 (194)
Q Consensus 115 ~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v 150 (194)
.+.|.|.++..+|.|.|+|.|.|..|....++.|.|
T Consensus 156 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 191 (192)
T 2va4_A 156 SSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDI 191 (192)
T ss_dssp EEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred ceEEEEecCCcccCEEEEEEEEecCCceEEEEEEEe
Confidence 468999999999999999999999999888888876
No 16
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.80 E-value=1.2e-18 Score=126.12 Aligned_cols=131 Identities=12% Similarity=0.190 Sum_probs=103.5
Q ss_pred cCCeEEEcCCeeeeeCCCcEEEEeeee-ccCCceeEEEecCceE-------------------------E----------
Q psy16426 8 VPPMIWIQNQLVGAMEGDQMTLECHSE-AYPKSINYWTKENGEI-------------------------I---------- 51 (194)
Q Consensus 8 ~~P~~~~~~~~~~v~~G~~v~L~C~~~-g~p~~~v~W~k~~~~l-------------------------~---------- 51 (194)
.+|.|...+.+..+.+|++++|.|.+. +.|.+.+.|++++..+ +
T Consensus 1 e~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 80 (195)
T 2c5d_C 1 EESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDT 80 (195)
T ss_dssp -CCSEEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTC
T ss_pred CCCeeccChhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCC
Confidence 478899999999999999999999999 8999999999976331 1
Q ss_pred ----------------------EeeCCeEEeccceeEEeeCCeEEEEEEeeccCCC-ccEEEecCcEEeeCCCceeEEec
Q psy16426 52 ----------------------AQVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKS-INYWTKENGEIIAQGSKYEPILL 108 (194)
Q Consensus 52 ----------------------v~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p-~v~W~~~~~~~~~~~~~~~~~~~ 108 (194)
|..+|.+...+....+.+|+.+.|.|.+.+.|.| .+.|++ ++.........
T Consensus 81 G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~-~~~~~~~~~~~----- 154 (195)
T 2c5d_C 81 GQYQCLVFLGHQTFVSQPGYVGLEGLPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQ-DAVPLATAPGH----- 154 (195)
T ss_dssp EEEEEEEEETTEEEECCCEEEEECCSCEEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEEE-SSCBSSSSTTS-----
T ss_pred cEEEEEEEeCCCceecccEEEEEecCCeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEE-CCEeccCCCCc-----
Confidence 4456666666666677889999999999999999 899999 44443322211
Q ss_pred CCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceE-EEEEEEc
Q psy16426 109 DNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTD-GSIKLYG 150 (194)
Q Consensus 109 ~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~-~~~~l~v 150 (194)
.....|.|.++. |.|.|+|.|.|..|... ..+.|.|
T Consensus 155 ----~~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 155 ----GPQRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp ----SCCEEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred ----CCCCeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 113589999887 78999999999999886 6788887
No 17
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.80 E-value=1.8e-18 Score=129.02 Aligned_cols=159 Identities=15% Similarity=0.291 Sum_probs=102.3
Q ss_pred ccCCeEEEcC----CeeeeeCCCcEEEEeeeeccCCceeEEEecCceEE-------------------------------
Q psy16426 7 NVPPMIWIQN----QLVGAMEGDQMTLECHSEAYPKSINYWTKENGEII------------------------------- 51 (194)
Q Consensus 7 ~~~P~~~~~~----~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~------------------------------- 51 (194)
..+|.+...+ ..+.+.+|++++|.|.+.+.|.+.+.|++++..+.
T Consensus 9 ~~~P~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 88 (241)
T 3grw_A 9 TGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYT 88 (241)
T ss_dssp --CCEESSGGGGSCCEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEE
T ss_pred CCCceeEcCCCCCCcceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEE
Confidence 4567765443 46788999999999999999999999999875432
Q ss_pred -----------------Eee----CCeEEe-ccceeEEeeCCeEEEEEEeeccCCCccEEEe----cCcEEeeCCCceeE
Q psy16426 52 -----------------AQV----PPMIWI-QNQLVGAMEGDQMTLECHSEAYPKSINYWTK----ENGEIIAQGSKYEP 105 (194)
Q Consensus 52 -----------------v~~----~p~i~~-~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~----~~~~~~~~~~~~~~ 105 (194)
|.. +|.+.. .+....+..|+.+.|.|.+.+.|.+.+.|++ ++..+.........
T Consensus 89 C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~ 168 (241)
T 3grw_A 89 CVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVT 168 (241)
T ss_dssp EEEEETTEEEEEEEEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCEE
T ss_pred EEEeecCCceEEEEEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCceeee
Confidence 211 122221 2344556789999999999999999999998 33322222211110
Q ss_pred ---EecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEcccCCCCChHHHHHHhh
Q psy16426 106 ---ILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGKKKKKKKKEKEKKVKK 166 (194)
Q Consensus 106 ---~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~p~~p~~~~~~~~~ 166 (194)
..........+.|.|.++..+|.|.|+|.+.|..|.....+.|.|..+|..+. +..+.++
T Consensus 169 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~-~~ve~~~ 231 (241)
T 3grw_A 169 VLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPRAAEE-ELVEADE 231 (241)
T ss_dssp EEEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC----------------
T ss_pred eeeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcceEEEEEEEEecCCCCCCc-cceeccc
Confidence 11112223466899999999999999999999999999999999988777666 4444433
No 18
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.79 E-value=2.5e-18 Score=123.08 Aligned_cols=128 Identities=13% Similarity=0.220 Sum_probs=97.9
Q ss_pred CCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceEE-------------------------------------
Q psy16426 9 PPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEII------------------------------------- 51 (194)
Q Consensus 9 ~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~------------------------------------- 51 (194)
+|.|...+.++.+.+|++++|.|.+.+.|.+.+.|++++..+.
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 81 (182)
T 1rhf_A 2 GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVED 81 (182)
T ss_dssp -----CCCEEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESS
T ss_pred CCEEEeCCcceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEc
Confidence 5778888888999999999999999999999999999864321
Q ss_pred -------------EeeCCeEEeccceeEEeeCCeEEEEEEeeccCCC-ccEEEecCcEEeeCCCceeEEecCCceeEEEE
Q psy16426 52 -------------AQVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKS-INYWTKENGEIIAQGSKYEPILLDNAYKIHMK 117 (194)
Q Consensus 52 -------------v~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (194)
|..+|.+...+....+..|+.+.|.|.+.+.|.| .+.|++ ++........ ....
T Consensus 82 ~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~-~~~~~~~~~~-----------~~~~ 149 (182)
T 1rhf_A 82 GGETEISQPVWLTVEGVPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWR-GTTKIGGPAP-----------SPSV 149 (182)
T ss_dssp CTTCEECCCEEEEEECSCEEEECCCCEEECTTCCEEEEEEEECSSSCCEEEEEE-TTEECSCSEE-----------SSEE
T ss_pred CCCcEEEEEEEEEEecCCeEEecCcceEecCCCEEEEEeEecCCCCCCEEEEEc-CCeECCCCCC-----------CceE
Confidence 5567777766666778899999999999999998 899999 5544432211 1358
Q ss_pred EEEeecCCCCCeEEEEEEEcCCCceEE-EEEEEc
Q psy16426 118 LTIKAVTKQDFGAYKCVSKNSLGDTDG-SIKLYG 150 (194)
Q Consensus 118 L~i~~~~~~d~g~y~C~a~n~~g~~~~-~~~l~v 150 (194)
|.|.++ +|.|.|+|.|.|..|...+ ++.|.|
T Consensus 150 L~i~~~--~d~G~Y~C~a~N~~g~~~s~~~~l~V 181 (182)
T 1rhf_A 150 LNVTGV--TQSTMFSCEAHNLKGLASSRTATVHL 181 (182)
T ss_dssp EEECCC--SSCEEEEEEEEETTEEEECCCEEEEE
T ss_pred EEEecc--ccCeEEEEEEECCCCCcccceEEEEe
Confidence 888888 5889999999999998754 666655
No 19
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.79 E-value=2e-18 Score=124.42 Aligned_cols=135 Identities=15% Similarity=0.158 Sum_probs=99.9
Q ss_pred cCCeEEEcCCeeeeeCCCcEEEEeeeeccC-CceeEEEe-cCceEE----------------------------------
Q psy16426 8 VPPMIWIQNQLVGAMEGDQMTLECHSEAYP-KSINYWTK-ENGEII---------------------------------- 51 (194)
Q Consensus 8 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p-~~~v~W~k-~~~~l~---------------------------------- 51 (194)
+|+.+...+.+..+.+|++++|.|.+.+.+ .+.+.|++ ++..+.
T Consensus 1 rp~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 80 (191)
T 1epf_A 1 RVLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCV 80 (191)
T ss_dssp --CCEEEESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred CceEEEecCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEE
Confidence 367888999999999999999999999976 78999999 543221
Q ss_pred ----------------EeeCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEE
Q psy16426 52 ----------------AQVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIH 115 (194)
Q Consensus 52 ----------------v~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (194)
|..+|.+...+....+.+|+.+.|.|.+.+.|.|.+.|++ ++...............+
T Consensus 81 ~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~-~~~~~~~~~~~~~~~~~~----- 154 (191)
T 1epf_A 81 VTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKH-KGRDVILKKDVRFIVLSN----- 154 (191)
T ss_dssp EEETTTEEEEEEEEEEEECCSEEEECCSSEECCTTSCEEECCEEECSSCCEEEEEE-TTEEGGGGCCTTEEECTT-----
T ss_pred EEcCCCcceEEEEEEEeecCceEecCCCcEeecCCCeEEEEEEECCCCCCEEEEEE-CCEEeeccCCceEEEecC-----
Confidence 3445666555556667889999999999999999999999 554443221111122222
Q ss_pred EEEEEeecCCCCCeEEEEEEEcCCCceEEEEEE
Q psy16426 116 MKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKL 148 (194)
Q Consensus 116 ~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l 148 (194)
..|.|.++..+|.|.|+|.|.|..+.......+
T Consensus 155 ~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~i 187 (191)
T 1epf_A 155 NYLQIRGIKKTDEGTYRCEGRILARGEINFKDI 187 (191)
T ss_dssp SCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEE
T ss_pred CeEEECCCChhhCEEEEEEEEEecceeEEEEEE
Confidence 279999999999999999999988665544433
No 20
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.79 E-value=1.6e-18 Score=136.88 Aligned_cols=144 Identities=21% Similarity=0.237 Sum_probs=109.3
Q ss_pred cccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceEE----------------------------------
Q psy16426 6 QNVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEII---------------------------------- 51 (194)
Q Consensus 6 v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~---------------------------------- 51 (194)
+..+|.+...+.+..+.+|++++|.|.+.|.|.+.+.|++++..+.
T Consensus 155 ~c~~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~~Y~C~a~n 234 (347)
T 2ifg_A 155 SCGVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKSGGLPSLGLTLANVTSDLNRKNVTCWAEN 234 (347)
T ss_dssp TCCCCEEEEECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECCCCCSSEEEEEEESCCSTTTTCCEEECCEE
T ss_pred cCCCCceeccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeecccccceecccceEEEeeCChHHCCCeEEEEEEc
Confidence 3468999999999999999999999999999999999999875421
Q ss_pred ------------EeeCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecC---CceeEEE
Q psy16426 52 ------------AQVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLD---NAYKIHM 116 (194)
Q Consensus 52 ------------v~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 116 (194)
|..+|.+ .......|+.+.|.|.+.|.|.|.+.|++ ++............... ......+
T Consensus 235 ~~g~~~~~~~l~V~~~P~i----~~~~~~~g~~v~l~C~~~g~P~p~i~W~~-~g~~l~~~~~~~~~~~~~~~~~~~~~~ 309 (347)
T 2ifg_A 235 DVGRAEVSVQVNVSFPASV----QLHTAVEMHHWCIPFSVDGQPAPSLRWLF-NGSVLNETSFIFTEFLEPAANETVRHG 309 (347)
T ss_dssp TTEECCEEECCCCBEEEEE----EECCCEESSSEEEEEEEEEESCCEEEEEE-TTEECCCCSSEEEEECCCCTTCCCEEE
T ss_pred CCCCEEEEEEEEEcCCCee----eeccCccCceEEEEEEeeecCCCcEEEEe-CCEECCCCcceeeEEEeecCCCcccce
Confidence 1112221 11224568999999999999999999998 55555443332221111 1123467
Q ss_pred EEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEcccCC
Q psy16426 117 KLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGKKKK 154 (194)
Q Consensus 117 ~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~p 154 (194)
+|.|.++..+|.|.|+|.|.|..|...+.+.|.|...|
T Consensus 310 ~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P 347 (347)
T 2ifg_A 310 CLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMDNP 347 (347)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTEEEEEEEEECSCCCC
T ss_pred EEEECCCCcccCceEEEEEecCCCceeeEEEEEecCCC
Confidence 89999999999999999999999999999999887654
No 21
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.79 E-value=1.1e-18 Score=128.04 Aligned_cols=143 Identities=16% Similarity=0.190 Sum_probs=99.3
Q ss_pred cccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCce-eEEEecCceEE---------------------------------
Q psy16426 6 QNVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSI-NYWTKENGEII--------------------------------- 51 (194)
Q Consensus 6 v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~-v~W~k~~~~l~--------------------------------- 51 (194)
...+|.+...+.+..+.+|++++|.|.+.+.|.+. +.|++++..+.
T Consensus 4 ~~p~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~s~~~~ 83 (204)
T 3sgj_C 4 DLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQASSYFIDAATVDDSGEYRCQTQLSTLSDPVQ 83 (204)
T ss_dssp --CBCEEEEESCCSEEETTCCEEEEEECCSSSSCCCEEEEETTEEESCCSSEEEESSCCGGGCEEEEEEETTSBCCCCEE
T ss_pred CCCCCeEEEcCCCeEEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccCccEEEEecccccCCEEEEEEeCCCcccccEE
Confidence 34568888888888899999999999999988775 99999876542
Q ss_pred --EeeCCeEEeccceeEEeeCCeEEEEEEeecc-CCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCC
Q psy16426 52 --AQVPPMIWIQNQLVGAMEGDQMTLECHSEAY-PKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDF 128 (194)
Q Consensus 52 --v~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~-p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 128 (194)
|..+|.+...+. ..+.+|+.+.|.|.+.+. |.+.+.|++ ++...... . ....|.|.++..+|.
T Consensus 84 l~V~~~p~~~~~~~-~~v~~G~~v~L~C~~~~~~p~~~v~W~k-~g~~~~~~------~------~~~~L~i~~v~~~D~ 149 (204)
T 3sgj_C 84 LEVHIGWLLLQAPR-WVFKEEDPIHLRCHSWKNTALHKVTYLQ-NGKGRKYF------H------HNSDFYIPKATLKDS 149 (204)
T ss_dssp EEEECSSEEEECSC-SEEETTCCEEEEEEEGGGCCCEEEEEEE-TTEEEEEE------E------ECCCEEESSCCGGGC
T ss_pred EEEecCceEecCCc-eeEeCCCcEEEEEEecCCCCCceEEEEE-CCcEeecc------c------CCceEEECcCCcccC
Confidence 444554443333 557789999999999766 457899999 44433211 0 124899999999999
Q ss_pred eEEEEEEEcCC-CceEEEEEEEcccCCCCChHHHH
Q psy16426 129 GAYKCVSKNSL-GDTDGSIKLYGKKKKKKKKEKEK 162 (194)
Q Consensus 129 g~y~C~a~n~~-g~~~~~~~l~v~~~p~~p~~~~~ 162 (194)
|.|+|.|.|.. +.....+.|.|...+..|.+...
T Consensus 150 G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~P~i~~~ 184 (204)
T 3sgj_C 150 GSYFCRGLVGSKNVSSETVQITITQGLAVSTISSF 184 (204)
T ss_dssp EEEEEEEEETTEEEECCCEEEEEEC----------
T ss_pred EEEEEEEEeCCCceecCcEEEEEeCcCCCCccccc
Confidence 99999999954 44455688888877777665433
No 22
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.79 E-value=6.1e-19 Score=135.04 Aligned_cols=145 Identities=22% Similarity=0.389 Sum_probs=105.0
Q ss_pred cccccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceEE--------------------------------
Q psy16426 4 QGQNVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEII-------------------------------- 51 (194)
Q Consensus 4 ~~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~-------------------------------- 51 (194)
+.|..+|.+...+.+..+.+|++++|.|.+.+.|.+.+.|++++..+.
T Consensus 93 l~v~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~ 172 (291)
T 2wim_A 93 LEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEG 172 (291)
T ss_dssp EEEECCCBCCSCCCSEEEETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEEECTTSCEEETTCCGGGCEEEEEEE
T ss_pred EEecCCcceEeCCCChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceEEEccCCCEEEEecchhhCEEEEEEE
Confidence 345667777777778889999999999999999999999999865432
Q ss_pred ----------------EeeCCeEEeccc--eeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCcee
Q psy16426 52 ----------------AQVPPMIWIQNQ--LVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYK 113 (194)
Q Consensus 52 ----------------v~~~p~i~~~~~--~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~ 113 (194)
+..+|.+..... ...+.+|+.+.|.|.+.+.|.|.+.|++ ++..+.....+. ....
T Consensus 173 ~n~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~-~g~~~~~~~~~~--~~~~--- 246 (291)
T 2wim_A 173 RVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFR-NGKLIEENEKYI--LKGS--- 246 (291)
T ss_dssp EETTTTEEEEEEEEEEEEBCCCCBCSCSEEECCSSSCCEEEEECBCCCBSCCEEEEEE-TTEECCCTTTEE--ECST---
T ss_pred EECCCCeeEEeeEEEEeccCCccccCcccccceecCCCeEEEEEEeecCCCCeEEEEE-CCEECcCCccEE--EcCC---
Confidence 222333322221 2345679999999999999999999999 566555444432 1121
Q ss_pred EEEEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEcccCCC
Q psy16426 114 IHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGKKKKK 155 (194)
Q Consensus 114 ~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~p~ 155 (194)
.+.|.|.++..+|.|.|+|.|.|..|...+.+.|.|...++
T Consensus 247 -~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~~~ 287 (291)
T 2wim_A 247 -NTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQHH 287 (291)
T ss_dssp -TCEEEEESCCSTTCEEEEEEEEETTEEEEEEEEEEC-----
T ss_pred -ccEEEEeeCCcccCEEEEEEEEECCCceeeeEEEEEEEecc
Confidence 24899999999999999999999999999999998877654
No 23
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.79 E-value=2.2e-18 Score=131.86 Aligned_cols=144 Identities=26% Similarity=0.415 Sum_probs=108.3
Q ss_pred cccccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceEE--------------------------------
Q psy16426 4 QGQNVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEII-------------------------------- 51 (194)
Q Consensus 4 ~~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~-------------------------------- 51 (194)
+.|..+|.+...+....+.+|+++.|.|.+.+.|.+.+.|++++..+.
T Consensus 95 l~v~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a 174 (291)
T 1qz1_A 95 VKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTYRCEG 174 (291)
T ss_dssp EEEECCSEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEETTSCSSTTCCTTEEECTTSCEEETTCCGGGCEEEEEEE
T ss_pred EEeeccccccCCCCcccccCCCeEEEEEEeccCCCCEEEEEECCEEcccCCCceEEEccCCcEEEccCccccCeEEEEEE
Confidence 345678999888888899999999999999999999999999875431
Q ss_pred ----------------EeeCCeEEeccc--eeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCc--eeEEecCCc
Q psy16426 52 ----------------AQVPPMIWIQNQ--LVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSK--YEPILLDNA 111 (194)
Q Consensus 52 ----------------v~~~p~i~~~~~--~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~--~~~~~~~~~ 111 (194)
|..+|.+..... ...+..|+.+.|.|.+.+.|.|.+.|++ ++..+..... ........
T Consensus 175 ~n~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~-~g~~~~~~~~~~~~~~~~~~- 252 (291)
T 1qz1_A 175 RILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTK-DGEPIENEEEDDEKHIFSDD- 252 (291)
T ss_dssp EEGGGTEEEEEEEEEEEEEEEEEEESCSEEEEETTSCCCEEEEEEEEEESCCEEEEEE-TTEECCCC--CCSSEEECTT-
T ss_pred EecCCCceeeEEEEEEEecCCcccccccccccccccCceEEEEEEEEEeCCCcEEEEE-CCEECcCCCCCCcceEEcCC-
Confidence 223444433222 3345679999999999999999999999 5554443321 11112221
Q ss_pred eeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEccc
Q psy16426 112 YKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGKK 152 (194)
Q Consensus 112 ~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~ 152 (194)
.+.|.|.++..+|.|.|+|.|.|..|.....+.|.|..
T Consensus 253 ---~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 290 (291)
T 1qz1_A 253 ---SSELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKVFA 290 (291)
T ss_dssp ---SCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred ---CcEEEEEecChhcCEEEEEEEEeCCCceEEEEEEEEEc
Confidence 24899999999999999999999999998888888753
No 24
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.79 E-value=1.3e-17 Score=119.70 Aligned_cols=130 Identities=22% Similarity=0.318 Sum_probs=100.5
Q ss_pred eeeeCCCcEEEEeeeeccCCc--eeEEEecCceEE-------------------------------------EeeCCeEE
Q psy16426 19 VGAMEGDQMTLECHSEAYPKS--INYWTKENGEII-------------------------------------AQVPPMIW 59 (194)
Q Consensus 19 ~~v~~G~~v~L~C~~~g~p~~--~v~W~k~~~~l~-------------------------------------v~~~p~i~ 59 (194)
..+.+|++++|.|.+.+.+.+ .+.|++++..+. |.++|.+.
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~~~~~~l~i~~~~d~G~Y~C~~~n~~~~~~~l~V~~~P~~~ 87 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVDSDDQWGEYSCVFLPEPMGTANIQLHGPPRVK 87 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCCCSEEEEEECGGGCCEEEEEEEESTTSCEEEEEECCSCCCE
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEeCCEEeecccccCCcEEEEEechhhCeEEEEEEECCcCcEEEEEEecCCcee
Confidence 467889999999999987776 899999876543 45567666
Q ss_pred eccceeEEeeCCeEEEEEEeeccC-CCccEEEe---cCcEEeeCC--CceeEEecCCceeEEEEEEEeecC-CCCCeEEE
Q psy16426 60 IQNQLVGAMEGDQMTLECHSEAYP-KSINYWTK---ENGEIIAQG--SKYEPILLDNAYKIHMKLTIKAVT-KQDFGAYK 132 (194)
Q Consensus 60 ~~~~~~~~~~g~~~~l~C~~~~~p-~p~v~W~~---~~~~~~~~~--~~~~~~~~~~~~~~~~~L~i~~~~-~~d~g~y~ 132 (194)
..+....+.+|+.+.|.|.+.+.| .+.+.|++ ++....... .++...... ..+.|.|.++. .+|.|.|+
T Consensus 88 ~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~L~i~~v~~~~d~G~Y~ 163 (184)
T 3b5h_A 88 AVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQ----GRSELHIENLNMEADPGQYR 163 (184)
T ss_dssp ESCSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEET----TEEEEEECSCCTTTSSEEEE
T ss_pred ecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecC----CeeEEEEeeccccccCceEE
Confidence 666666788999999999999999 78999998 444444322 233322111 14689999999 99999999
Q ss_pred EEEEcCCCceEEEEEEEccc
Q psy16426 133 CVSKNSLGDTDGSIKLYGKK 152 (194)
Q Consensus 133 C~a~n~~g~~~~~~~l~v~~ 152 (194)
|.|.|..|.....+.|.|..
T Consensus 164 C~a~N~~g~~~~~~~l~V~~ 183 (184)
T 3b5h_A 164 CNGTSSKGSDQAIITLRVRS 183 (184)
T ss_dssp EEEEETTEEEEEEEEEEEC-
T ss_pred EEEEeCCCcceEEEEEEEec
Confidence 99999999999888888753
No 25
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.78 E-value=1.8e-18 Score=127.21 Aligned_cols=141 Identities=23% Similarity=0.355 Sum_probs=103.3
Q ss_pred ccccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceEE---------------------------------
Q psy16426 5 GQNVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEII--------------------------------- 51 (194)
Q Consensus 5 ~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~--------------------------------- 51 (194)
+...+|.|...+.++.+.+|++++|.|.+.+.|.+.+.|++++..+.
T Consensus 5 ~~~~~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y 84 (217)
T 2vr9_A 5 GQYQSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEY 84 (217)
T ss_dssp -CCCCCEEEECCCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEE
T ss_pred cccCCCEEecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceE
Confidence 45689999999999999999999999999999999999999765432
Q ss_pred -------------------Eee-CCeEEeccceeEEeeCCeEEEEEEe-eccCCCccEEEecCcEEeeCCCcee------
Q psy16426 52 -------------------AQV-PPMIWIQNQLVGAMEGDQMTLECHS-EAYPKSINYWTKENGEIIAQGSKYE------ 104 (194)
Q Consensus 52 -------------------v~~-~p~i~~~~~~~~~~~g~~~~l~C~~-~~~p~p~v~W~~~~~~~~~~~~~~~------ 104 (194)
|.. +|.+...+....+..|+.+.|.|.+ .+.|.+.+.|++ ++..+.......
T Consensus 85 ~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~-~g~~~~~~~~~~~~~~~~ 163 (217)
T 2vr9_A 85 WCVAKNRVGQAVSRHASLQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIK-DGVPLDDLKAMSFGASSR 163 (217)
T ss_dssp EEEEEETTEEEECCCEEEEECEECCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEE-TTEEECCCCCC---CCCS
T ss_pred EEEEecCCCccccccceEEEEEeCCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEE-CCcCCCcccccccccCCc
Confidence 111 2222223344557789999999998 889999999999 555444221110
Q ss_pred EEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEcc
Q psy16426 105 PILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGK 151 (194)
Q Consensus 105 ~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~ 151 (194)
..... .+.|.|.++..+|.|.|+|.|.|..|...+...+.+.
T Consensus 164 ~~~~~-----~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~lv~ 205 (217)
T 2vr9_A 164 VRIVD-----GGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIV 205 (217)
T ss_dssp EEEET-----TTEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEE
T ss_pred EEecC-----CCcEEEeeCCHHHCeEEEEEEEcccceeccccEEEEE
Confidence 01111 2379999999999999999999999988766444443
No 26
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.78 E-value=3.7e-18 Score=136.30 Aligned_cols=129 Identities=24% Similarity=0.359 Sum_probs=102.2
Q ss_pred EcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceEE------------------------------------------
Q psy16426 14 IQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEII------------------------------------------ 51 (194)
Q Consensus 14 ~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~------------------------------------------ 51 (194)
..+.+..+.+|++++|.|.+.|.|.|.+.|+++++..+
T Consensus 210 ~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~ 289 (384)
T 3kld_A 210 QFPETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQ 289 (384)
T ss_dssp ECCSEEEEETTSCEEEEEEEEEESCCEEEEEETTCCCCCTTCEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred cCCCceEecCCCcEEEEEEEeecCCCcEEEEeCCCccccccceecCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEE
Confidence 34566778999999999999999999999999654211
Q ss_pred --EeeCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCe
Q psy16426 52 --AQVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFG 129 (194)
Q Consensus 52 --v~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g 129 (194)
|..+|.+........+..|+.+.|.|.+.|.|.|.+.|++ ++..+....++. .. + .+|.|.++..+|.|
T Consensus 290 l~v~~~P~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~i~W~k-~g~~l~~~~~~~--~~-~-----~~L~i~~v~~~D~G 360 (384)
T 3kld_A 290 LTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLK-NGDPLLTRDRIQ--IE-Q-----GTLNITIVNLSDAG 360 (384)
T ss_dssp EEEEEEEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEE-TTEECCCBTTEE--EE-T-----TEEEESSCCGGGCE
T ss_pred EEEecCCccccCCCceEecCCCCEEEEeECCccCCCeEEEEE-CCEECCCCccEE--Ee-C-----CEEEEeecChhhCE
Confidence 4445555555566677889999999999999999999999 555544433332 11 1 28999999999999
Q ss_pred EEEEEEEcCCCceEEEEEEEcc
Q psy16426 130 AYKCVSKNSLGDTDGSIKLYGK 151 (194)
Q Consensus 130 ~y~C~a~n~~g~~~~~~~l~v~ 151 (194)
.|+|.|.|..|...++..|.|.
T Consensus 361 ~Y~C~A~N~~G~~~~~a~L~V~ 382 (384)
T 3kld_A 361 MYQCVAENKHGVIFSSAELSVI 382 (384)
T ss_dssp EEEEEEEETTEEEEEEEEEEEC
T ss_pred EEEEEEEeCCceEEeceEEEEe
Confidence 9999999999999999888875
No 27
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.78 E-value=1.3e-18 Score=127.19 Aligned_cols=144 Identities=22% Similarity=0.350 Sum_probs=104.5
Q ss_pred cccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceEE----------------------------------
Q psy16426 6 QNVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEII---------------------------------- 51 (194)
Q Consensus 6 v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~---------------------------------- 51 (194)
...||.|...+.++.+.+|++++|.|.+.+.|.+.+.|++++..+.
T Consensus 6 ~~~pp~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G 85 (212)
T 2v9r_A 6 EDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEG 85 (212)
T ss_dssp CCEEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCE
T ss_pred ccCCcceecCCCceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCe
Confidence 3578999999999999999999999999999999999999764431
Q ss_pred ---------------------Eee-CCeEEeccceeEEeeCCeEEEEEEe-eccCCCccEEEecCcEEeeCCCceeEEec
Q psy16426 52 ---------------------AQV-PPMIWIQNQLVGAMEGDQMTLECHS-EAYPKSINYWTKENGEIIAQGSKYEPILL 108 (194)
Q Consensus 52 ---------------------v~~-~p~i~~~~~~~~~~~g~~~~l~C~~-~~~p~p~v~W~~~~~~~~~~~~~~~~~~~ 108 (194)
|.. ++.+...+....+..|+.+.|.|.+ .+.|.+.+.|++ ++..+....... ...
T Consensus 86 ~Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~-~~~~l~~~~~~~-~~~ 163 (212)
T 2v9r_A 86 VYVCVARNYLGEAVSHDASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKK-DGSPLDDKDERI-TIR 163 (212)
T ss_dssp EEEEEEEETTEEEECCCEEEEECEECSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEE-TTEEECTTSTTE-EEE
T ss_pred EEEEEEECCCCceeecceEEEEEeccccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEE-CCccCCCCcceE-Ecc
Confidence 110 1111222334557789999999998 888999999999 555444332211 111
Q ss_pred CCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEE-EEEEEcccCCCCC
Q psy16426 109 DNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDG-SIKLYGKKKKKKK 157 (194)
Q Consensus 109 ~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~-~~~l~v~~~p~~p 157 (194)
+ ..|.|.++..+|.|.|+|.+.|..|...+ .+.|.|...|...
T Consensus 164 ~------~~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~~~P~~~ 207 (212)
T 2v9r_A 164 G------GKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFV 207 (212)
T ss_dssp T------TEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC-----
T ss_pred C------CeEEEeeCCHhhCeeEEEEEecccCceecceEEEEEEeCchHh
Confidence 1 38999999999999999999999998665 4788887766533
No 28
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.78 E-value=1.4e-17 Score=132.49 Aligned_cols=143 Identities=19% Similarity=0.328 Sum_probs=108.4
Q ss_pred CCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEec--CceE----------------------E-------------
Q psy16426 9 PPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKE--NGEI----------------------I------------- 51 (194)
Q Consensus 9 ~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~--~~~l----------------------~------------- 51 (194)
+|.|.. +.+..+.+|++++|.|.+.|.|.+.|.|+++ +..+ .
T Consensus 1 ~P~i~~-~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 79 (389)
T 2jll_A 1 QPHIIQ-LKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYD 79 (389)
T ss_dssp CCEEEE-CCCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEE
T ss_pred CCeEEe-cCceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEE
Confidence 578876 5567788999999999999999999999998 3211 1
Q ss_pred -----------------EeeCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCC--ceeEEecCCce
Q psy16426 52 -----------------AQVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGS--KYEPILLDNAY 112 (194)
Q Consensus 52 -----------------v~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~--~~~~~~~~~~~ 112 (194)
|..+|.+........+.+|+.+.|.|.+.+.|.+.+.|++ ++..+.... ++.... +.
T Consensus 80 C~a~n~~g~~~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~-~g~~l~~~~~~~~~~~~-~~-- 155 (389)
T 2jll_A 80 CEAASRIGGHQKSMYLDIEYAPKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRR-DKLVLPAKNTTNLKTYS-TG-- 155 (389)
T ss_dssp EEEECSSCEEEEEEEEEEEEEEEECCSCCEEEECTTCCEEEEECEEEESCCEEEEEE-TTEESSCTTCTTEEEEE-CS--
T ss_pred EEEEeCCCCcceEEEEEEEeCCEEecCcceEEeccCCEEEEEEEEEecCCCeEEEEE-CCccCCcccCceEEEec-cC--
Confidence 4445555444344456789999999999999999999999 555544332 232211 11
Q ss_pred eEEEEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEcccCCCCC
Q psy16426 113 KIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGKKKKKKK 157 (194)
Q Consensus 113 ~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~p~~p 157 (194)
..+.|.|.++...|.|.|+|.|.|..|.....+.|.+...|..|
T Consensus 156 -~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~P 199 (389)
T 2jll_A 156 -RKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPSSP 199 (389)
T ss_dssp -SCEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCCCCCC
T ss_pred -CEEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCCCCCC
Confidence 13589999999999999999999999998888888887777666
No 29
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.78 E-value=5.4e-19 Score=130.73 Aligned_cols=154 Identities=18% Similarity=0.247 Sum_probs=106.4
Q ss_pred ccCCeEEEcC----CeeeeeCCCcEEEEeeeeccCCceeEEEecCceEE-------------------------------
Q psy16426 7 NVPPMIWIQN----QLVGAMEGDQMTLECHSEAYPKSINYWTKENGEII------------------------------- 51 (194)
Q Consensus 7 ~~~P~~~~~~----~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~------------------------------- 51 (194)
..+|.+...+ ....+.+|++++|.|.+.+.|.+.+.|++++..+.
T Consensus 13 ~~~P~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 92 (231)
T 3ojm_B 13 KRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYT 92 (231)
T ss_dssp CEEEEESCGGGGCCSCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEE
T ss_pred ccCCccccccccCceeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEE
Confidence 4678887666 67889999999999999999999999999875532
Q ss_pred -----------------Eee----CCeEEe-ccceeEEeeCCeEEEEEEeeccCCCccEEEec---CcEEeeCCCc-eeE
Q psy16426 52 -----------------AQV----PPMIWI-QNQLVGAMEGDQMTLECHSEAYPKSINYWTKE---NGEIIAQGSK-YEP 105 (194)
Q Consensus 52 -----------------v~~----~p~i~~-~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~---~~~~~~~~~~-~~~ 105 (194)
|.. +|.+.. .+....+..|+.+.|.|.+.+.|.+.+.|++. ++..+..... ...
T Consensus 93 C~~~n~~~~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~ 172 (231)
T 3ojm_B 93 CVVENEYGSINHTYHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLK 172 (231)
T ss_dssp EEEEETTEEEEEEEEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTTSCBCEE
T ss_pred EEEecccCcccccEEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCCCcceEe
Confidence 211 122211 13445677899999999999999999999982 2222221111 110
Q ss_pred E--ecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEcccCCCCChHH
Q psy16426 106 I--LLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGKKKKKKKKEK 160 (194)
Q Consensus 106 ~--~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~p~~p~~~ 160 (194)
. .........+.|.|.++..+|.|.|+|.+.|..|.....+.|.|...|..|..+
T Consensus 173 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~p~~~ 229 (231)
T 3ojm_B 173 VLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLPKQQAPGRE 229 (231)
T ss_dssp EEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC------
T ss_pred EecccccccCCccEEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEecCCCCCccc
Confidence 1 011111123479999999999999999999999999999999999888887743
No 30
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.77 E-value=1.7e-17 Score=119.39 Aligned_cols=128 Identities=17% Similarity=0.265 Sum_probs=94.7
Q ss_pred eEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEe-cCceE-----------------E---------------------
Q psy16426 11 MIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTK-ENGEI-----------------I--------------------- 51 (194)
Q Consensus 11 ~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k-~~~~l-----------------~--------------------- 51 (194)
.+...+.+..+.+|++++|.|.+.+.|. .+.|++ ++..+ .
T Consensus 4 ~~~~~~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g 82 (189)
T 2v44_A 4 QVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKG 82 (189)
T ss_dssp EEEESCSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTS
T ss_pred EEEecCCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCC
Confidence 4667788889999999999999999877 899999 43221 1
Q ss_pred ----------EeeCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEee-CCCceeEEecCCceeEEEEEEE
Q psy16426 52 ----------AQVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIA-QGSKYEPILLDNAYKIHMKLTI 120 (194)
Q Consensus 52 ----------v~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~-~~~~~~~~~~~~~~~~~~~L~i 120 (194)
|..+|.+........+..|+.+.|.|.+.+.|.|.+.|++++..+.. ...++. ...+ ..|.|
T Consensus 83 ~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~--~~~~-----~~L~i 155 (189)
T 2v44_A 83 QTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFA--MLAN-----NNLQI 155 (189)
T ss_dssp CEEEEEEEEEEECCCEEESCCCSEEEETTSCEEECCEEECSSCCEEEEEEEC--CEECCCTTEE--ECTT-----SCEEE
T ss_pred CcEEEEEEEEEecCCceeecCCcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEeccCCCCEE--EecC-----CcEEE
Confidence 34455555444556678999999999999999999999995544432 222322 2222 28999
Q ss_pred eecCCCCCeEEEEEEEcCCCceEEEE
Q psy16426 121 KAVTKQDFGAYKCVSKNSLGDTDGSI 146 (194)
Q Consensus 121 ~~~~~~d~g~y~C~a~n~~g~~~~~~ 146 (194)
.++..+|.|.|+|.|.|..+......
T Consensus 156 ~~v~~~d~G~Y~C~a~n~~~~~~~~~ 181 (189)
T 2v44_A 156 LNINKSDEGIYRCEGRVEARGEIDFR 181 (189)
T ss_dssp TTCCGGGCEEEEEEEEETTTTEEEEE
T ss_pred EEcCcccCeEEEEEEEccccCceeee
Confidence 99999999999999999987765443
No 31
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.77 E-value=5.2e-18 Score=135.43 Aligned_cols=136 Identities=27% Similarity=0.469 Sum_probs=107.5
Q ss_pred eEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceEE---------------------------------------
Q psy16426 11 MIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEII--------------------------------------- 51 (194)
Q Consensus 11 ~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~--------------------------------------- 51 (194)
.+...+....+.+|++++|.|.+.+.|.+.+.|++++..+.
T Consensus 223 ~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 302 (403)
T 3laf_A 223 YFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSLLGGSNLLISNVTDDDSGTYTCVVTYKNENIS 302 (403)
T ss_dssp EEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCSSSSEEEETTTEEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred eEecCCCceEecCCCcEEEEEEcCCCCCCeEEEEECCeeccCCCceEEECCccEEEEeCCCHHHCEEEEEEEEcCCCceE
Confidence 45556677788999999999999999999999999765432
Q ss_pred ------EeeCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCC
Q psy16426 52 ------AQVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTK 125 (194)
Q Consensus 52 ------v~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~ 125 (194)
|..+|.+...+....+.+|+.+.|.|.+.+.|.|.+.|++ ++........+. ...+ +.|.|.++..
T Consensus 303 ~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~-~g~~~~~~~~~~--~~~~-----~~L~i~~v~~ 374 (403)
T 3laf_A 303 ASAELTVLVPPWFLNHPSNLYAYESMDIEFECAVSGKPVPTVNWMK-NGDVVIPSDYFQ--IVGG-----SNLRILGVVK 374 (403)
T ss_dssp EEEEEEEEEEEEEEECCCCEECCTTCCEEECCEEEEESCCEEEEEE-TTEECCCSSSEE--EETT-----TEEEESSCCG
T ss_pred EEEEEEEECCCcEeecCcceEEecCCeEEEEEEEeeccCCEEEEEE-CCEECCCCCcEE--EecC-----ccEEEecccc
Confidence 4456666666666667889999999999999999999999 555544443332 1122 3799999999
Q ss_pred CCCeEEEEEEEcCCCceEEEEEEEcccCC
Q psy16426 126 QDFGAYKCVSKNSLGDTDGSIKLYGKKKK 154 (194)
Q Consensus 126 ~d~g~y~C~a~n~~g~~~~~~~l~v~~~p 154 (194)
+|.|.|+|.|.|..|...+.+.|.|..+|
T Consensus 375 ~d~G~Y~C~a~N~~G~~~~~~~l~V~~P~ 403 (403)
T 3laf_A 375 SDEGFYQCVAENEAGNAQSSAQLIVPKPA 403 (403)
T ss_dssp GGCEEEEEEEEETTEEEEEEEEEECCCC-
T ss_pred ccCEEEEEEEEcCCceEEEEEEEEEeCCC
Confidence 99999999999999999999999887653
No 32
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.77 E-value=4.4e-17 Score=124.49 Aligned_cols=147 Identities=20% Similarity=0.254 Sum_probs=107.8
Q ss_pred ccccCCe-EEEcCCeeeeeCCCcEEEEeeeeccCCce-eEEEecCceEE-------------------------------
Q psy16426 5 GQNVPPM-IWIQNQLVGAMEGDQMTLECHSEAYPKSI-NYWTKENGEII------------------------------- 51 (194)
Q Consensus 5 ~v~~~P~-~~~~~~~~~v~~G~~v~L~C~~~g~p~~~-v~W~k~~~~l~------------------------------- 51 (194)
.|..+|. +...+....+.+|+++.|.|.+.+.+.+. +.|++.++..+
T Consensus 84 ~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 163 (289)
T 3ejj_X 84 YVKDPAHSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFFSPWRGFIIRKAKVLDSNTYVCKT 163 (289)
T ss_dssp EECCSSCSEEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEEEETTTEEEESSCCGGGCEEEEEEE
T ss_pred EEeCCCcceecccceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCccEEECCCCCEEEeecccccCEEEEEEE
Confidence 3445555 56677888899999999999999877665 99997543321
Q ss_pred ---------------Ee----eCCeEEeccceeEEeeCCeEEEEEEeec-cCCCccEEEecCcEEeeCCCceeEEecCCc
Q psy16426 52 ---------------AQ----VPPMIWIQNQLVGAMEGDQMTLECHSEA-YPKSINYWTKENGEIIAQGSKYEPILLDNA 111 (194)
Q Consensus 52 ---------------v~----~~p~i~~~~~~~~~~~g~~~~l~C~~~~-~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~ 111 (194)
|. .+|.+...+....+.+|+.+.|.|.+.+ .|.+.+.|++ ++......... ......
T Consensus 164 ~~~~~~~~~~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~-~~~~~~~~~~~--~~~~~~ 240 (289)
T 3ejj_X 164 MVNGRESTSTGIWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIVCSATNAEVGFNVILKR-GDTKLEIPLNS--DFQDNY 240 (289)
T ss_dssp EETTEEEECCCEEEEEESSCCCCCEEEEESSSEECCSSSCEEEEEEEEESSSCCEEEEEE-TTEECCCCEEE--EECSSS
T ss_pred EeCCCccccccEEEEEEECCCCCCeEEecCCceEEEeCCcEEEEEEeCCCCCceEEEEEE-CCEEeeccCCc--ccccce
Confidence 33 4566665555555678999999999998 6888999999 55544332111 122333
Q ss_pred eeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEcccCC
Q psy16426 112 YKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGKKKK 154 (194)
Q Consensus 112 ~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~p 154 (194)
....+.|.|.++..+|.|.|+|.|.|..|...+++.|.+...+
T Consensus 241 ~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~~L~~~~~~ 283 (289)
T 3ejj_X 241 YKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQVVESH 283 (289)
T ss_dssp EEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEEECC---
T ss_pred EEeeEEEEEEeecccCCEEEEEEEEcCCCCccccEEEEEEecc
Confidence 4456799999999999999999999999999999999876554
No 33
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.77 E-value=1.5e-18 Score=127.54 Aligned_cols=125 Identities=18% Similarity=0.200 Sum_probs=87.8
Q ss_pred eeeeeCCCcEEEEee---eeccCCceeEEEecCce----------------------------------EE---------
Q psy16426 18 LVGAMEGDQMTLECH---SEAYPKSINYWTKENGE----------------------------------II--------- 51 (194)
Q Consensus 18 ~~~v~~G~~v~L~C~---~~g~p~~~v~W~k~~~~----------------------------------l~--------- 51 (194)
++.+.+|++++|.|. +.+.|.+.|+||+++.. |.
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 81 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHD 81 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHC
Confidence 567899999999995 56778999999996521 10
Q ss_pred ---------------------EeeCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeC-CCceeE-Eec
Q psy16426 52 ---------------------AQVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQ-GSKYEP-ILL 108 (194)
Q Consensus 52 ---------------------v~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~-~~~~~~-~~~ 108 (194)
|..||.+...+....+.+|+.+.|.|.+.|.|.|.+.|+++++..... ...... ...
T Consensus 82 G~Y~C~a~n~~g~~~~~~~l~V~~p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~~~~r~~~~~ 161 (203)
T 4fa8_A 82 GNYLCRMKLGETEVTKQEHLSVVKPLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVMKEK 161 (203)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEEEEEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC------------CCEECT
T ss_pred eEEEEEEEcCCCcEEEEEEEEecCCceeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCcccccceEEEeC
Confidence 455666665556666778999999999999999999998855544321 111111 222
Q ss_pred CCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEE
Q psy16426 109 DNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGS 145 (194)
Q Consensus 109 ~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~ 145 (194)
++. ...+.|.++..+|.|.|+|.|.|..|..+..
T Consensus 162 ~g~---l~il~i~~v~~~D~G~YtC~A~N~~G~a~~v 195 (203)
T 4fa8_A 162 DGS---LSVAVDLSLPKPWHLPVTCVGKNDKEEAHGV 195 (203)
T ss_dssp TSC---EEEEEEEEECSSCCCCEEEEEESSSCEEEEE
T ss_pred CCC---EEEEEECCCCHHHCEEEEEEEEcCCCEEEEE
Confidence 222 3456778999999999999999999988764
No 34
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.76 E-value=6.1e-18 Score=123.45 Aligned_cols=140 Identities=19% Similarity=0.314 Sum_probs=100.1
Q ss_pred CCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceE-------------------------E------------
Q psy16426 9 PPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEI-------------------------I------------ 51 (194)
Q Consensus 9 ~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l-------------------------~------------ 51 (194)
|+.+...+.++.+.+|++++|.|.+.+.|.+.+.|++++..+ .
T Consensus 1 ~~~v~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~v~~~D~G~Y 80 (212)
T 1f97_A 1 KGSVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSSSGITFSSVTRKDNGEY 80 (212)
T ss_dssp CCEEECSCSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEETTEEEESCCCGGGCEEE
T ss_pred CceEEecCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeeceeEEEcccCcccCeEE
Confidence 466777888899999999999999999899999999987552 0
Q ss_pred --------------------EeeCCeEEeccceeEEeeCCeEEEEEE-eeccCCCccEEEecCcE-EeeCCCce------
Q psy16426 52 --------------------AQVPPMIWIQNQLVGAMEGDQMTLECH-SEAYPKSINYWTKENGE-IIAQGSKY------ 103 (194)
Q Consensus 52 --------------------v~~~p~i~~~~~~~~~~~g~~~~l~C~-~~~~p~p~v~W~~~~~~-~~~~~~~~------ 103 (194)
|..+|.+........+.+|+.+.|.|. +.+.|.|.+.|++ ++. .+......
T Consensus 81 ~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~-~~~~~l~~~~~~~~~~~~ 159 (212)
T 1f97_A 81 TCMVSEEGGQNYGEVSIHLTVLVPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFK-DGISMLTADAKKTRAFMN 159 (212)
T ss_dssp EEEEEETTSSSEEEEEEEEEEEBCCCCCEEECCSEEETTSCEEEEEECSCCBSCCEEEEEE-TTEESBC-----CBSCSS
T ss_pred EEEEEccCCCcccEEEEEEEEEcCCCCcccCCccccCCCCeEEEEEEcccCcCCCEEEEEe-CCcccccccccccccccC
Confidence 223332222223345678999999999 7899999999999 444 43322111
Q ss_pred -eEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCce--EEEEEEEcccC
Q psy16426 104 -EPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDT--DGSIKLYGKKK 153 (194)
Q Consensus 104 -~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~--~~~~~l~v~~~ 153 (194)
....... .+.|.|.++..+|.|.|+|.|.|..|.. ...+.|.|.+.
T Consensus 160 ~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~~~ 208 (212)
T 1f97_A 160 SSFTIDPK----SGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAVEL 208 (212)
T ss_dssp SCEEECTT----TCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEEESS
T ss_pred ceeEecCC----CceEEEEecChhhCcEEEEEEccccCCccccceEEEEEEEe
Confidence 0011111 2489999999999999999999999988 45677776553
No 35
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.75 E-value=7.2e-18 Score=134.55 Aligned_cols=129 Identities=17% Similarity=0.265 Sum_probs=100.7
Q ss_pred eeeeeCCCcEEEEeeeeccCCceeEEEecCceEE--------------------------------------------Ee
Q psy16426 18 LVGAMEGDQMTLECHSEAYPKSINYWTKENGEII--------------------------------------------AQ 53 (194)
Q Consensus 18 ~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~--------------------------------------------v~ 53 (194)
...+.+|++++|.|.+.+.|.+.+.|++++..+. |.
T Consensus 231 ~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 310 (404)
T 3p3y_A 231 SQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVK 310 (404)
T ss_dssp EEEEETTSCEEEECCBCCSSCCEEEEEETTBCCCTTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred CceEecCCCEEEEEEECCCCCCcEEEEECCEECCCCcccccccCceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEe
Confidence 4568899999999999999999999999875432 44
Q ss_pred eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEE
Q psy16426 54 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKC 133 (194)
Q Consensus 54 ~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C 133 (194)
.+|.+...+....+.+|+.+.|.|.+.+.|.|.+.|++ ++..+............ ..+|.|.++..+|.|.|+|
T Consensus 311 ~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~-~g~~~~~~~~~~~~~~~-----~~~L~i~~v~~~d~G~Y~C 384 (404)
T 3p3y_A 311 AAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMV-NGEPLQSAPPNPNREVA-----GDTIIFRDTQISSRAVYQC 384 (404)
T ss_dssp EEEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEE-TTEEGGGSCCCTTEEEE-----TTEEEESSCCSSCCCEEEE
T ss_pred CCCeeeccCCcceeecCCcEEEEEEccccCCCceEEEE-CCEecCCCCCCceEEec-----CCEEEEeecCHHHCEEEEE
Confidence 56666666666778889999999999999999999999 55544332211001111 2389999999999999999
Q ss_pred EEEcCCCceEEEEEEEccc
Q psy16426 134 VSKNSLGDTDGSIKLYGKK 152 (194)
Q Consensus 134 ~a~n~~g~~~~~~~l~v~~ 152 (194)
.|.|..|...+.+.|.|.+
T Consensus 385 ~a~N~~G~~~~~~~l~V~d 403 (404)
T 3p3y_A 385 NTSNEHGYLLANAFVSVLD 403 (404)
T ss_dssp EEEETTEEEEEEEEEEEC-
T ss_pred EEEeCCCcEEEEEEEEEEe
Confidence 9999999999998888754
No 36
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.75 E-value=2.1e-17 Score=117.99 Aligned_cols=133 Identities=17% Similarity=0.237 Sum_probs=98.6
Q ss_pred ccccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCce-eEEEecCceEE--------------------------------
Q psy16426 5 GQNVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSI-NYWTKENGEII-------------------------------- 51 (194)
Q Consensus 5 ~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~-v~W~k~~~~l~-------------------------------- 51 (194)
+...+|.+...+....+.+|++++|.|.+.+.|.+. +.|++++..+.
T Consensus 3 ~~~~~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~s~~~ 82 (175)
T 1fnl_A 3 EDLPKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFIDAATVNDSGEYRCQTNLSTLSDPV 82 (175)
T ss_dssp CCCCCCEEEEESCCSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEESSCSEEEESSCCGGGCEEEEEECSSSCCCCCE
T ss_pred CCCCCCEEEEcCCceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEccCCceEEEEeCCCcccCEEEEEEeeCCcccccE
Confidence 456789999999888999999999999999987765 88999876543
Q ss_pred ---EeeCCeEEeccceeEEeeCCeEEEEEEeeccCCC-ccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCC
Q psy16426 52 ---AQVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKS-INYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQD 127 (194)
Q Consensus 52 ---v~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 127 (194)
|..++.+... ....+.+|+.+.|.|.+.+.+++ .+.|++ ++...... .....|.|.++..+|
T Consensus 83 ~l~V~~~~~~~~~-~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k-~g~~~~~~------------~~~~~L~i~~v~~~d 148 (175)
T 1fnl_A 83 QLEVHIGWLLLQA-PRWVFKEEDPIHLRCHSWKNTALHKVTYLQ-NGKDRKYF------------HHNSDFHIPKATLKD 148 (175)
T ss_dssp EEEEECSSEEEEC-SCSEEETTCCEEEEEEECTTCCCEEEEEEE-TTEEEEEE------------EECCCEEESSCCGGG
T ss_pred EEEEeCCCceeeC-CCceecCCCCEEEEEEcCCCCCceEEEEEE-CCeEccCC------------CCCCEEEEcccChhh
Confidence 3333333322 33557789999999999887654 899999 44443210 012489999999999
Q ss_pred CeEEEEEEEcCCCc-eEEEEEEEcc
Q psy16426 128 FGAYKCVSKNSLGD-TDGSIKLYGK 151 (194)
Q Consensus 128 ~g~y~C~a~n~~g~-~~~~~~l~v~ 151 (194)
.|.|+|.|.|..+. ....+.|.|.
T Consensus 149 ~G~Y~C~a~n~~~~~~s~~~~l~V~ 173 (175)
T 1fnl_A 149 SGSYFCRGLVGSKNVSSETVNITIT 173 (175)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEEE
T ss_pred CeEEEEEEEcCCCCccCccEEEEEe
Confidence 99999999997654 3345666654
No 37
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.75 E-value=3e-17 Score=135.80 Aligned_cols=147 Identities=18% Similarity=0.281 Sum_probs=113.3
Q ss_pred ccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCce-eEEEecCceE---------------E-------------------
Q psy16426 7 NVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSI-NYWTKENGEI---------------I------------------- 51 (194)
Q Consensus 7 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~-v~W~k~~~~l---------------~------------------- 51 (194)
..+|.+...+.+..+.+|++++|.|.+.+.|.+. +.|++++..+ .
T Consensus 209 ~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y 288 (524)
T 2ec8_A 209 KAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVF 288 (524)
T ss_dssp CSCCEEECSCSEEEEETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEE
T ss_pred CCCCcEEecCCcceEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCccccccccccccCCccceEEEEEECCCCHHHCEEE
Confidence 3789999999888999999999999999988886 9999988761 0
Q ss_pred ------------------EeeCCeEEecc---ceeEEeeCCeEEEEEEeeccCCCc-cEEEecCcEEeeCCC-ceeEEec
Q psy16426 52 ------------------AQVPPMIWIQN---QLVGAMEGDQMTLECHSEAYPKSI-NYWTKENGEIIAQGS-KYEPILL 108 (194)
Q Consensus 52 ------------------v~~~p~i~~~~---~~~~~~~g~~~~l~C~~~~~p~p~-v~W~~~~~~~~~~~~-~~~~~~~ 108 (194)
|..+|.+...+ ....+.+|+.+.|.|.+.+.|.|. +.|+++ +....... .+.....
T Consensus 289 ~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~-g~~~~~~~~~~~~~~~ 367 (524)
T 2ec8_A 289 MCYANNTFGSANVTTTLEVVDKGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWIYM-NRTFTDKWEDYPKSEN 367 (524)
T ss_dssp EEEEECSSCEEEEEEEEEEESSCEEEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEEESS-SCBCSSSBCCEESCCS
T ss_pred EEEEEecCCceEEEEEEEEeccCceEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEEEEC-CeeccCCccceeEEcc
Confidence 44566665433 256788999999999999999999 999994 44433332 2221111
Q ss_pred CCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEcccCC
Q psy16426 109 DNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGKKKK 154 (194)
Q Consensus 109 ~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~p 154 (194)
++.+...+.|.|.++..+|.|.|+|.|.|..|....++.|.|...|
T Consensus 368 ~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P 413 (524)
T 2ec8_A 368 ESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFNVYVNTKP 413 (524)
T ss_dssp SSCCEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEEE
T ss_pred CCCceeEEEEEEeecCcccCeEEEEEEEecCceEEEEEEEEEecCC
Confidence 1123346799999999999999999999999998888888876544
No 38
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.75 E-value=1.8e-17 Score=128.60 Aligned_cols=141 Identities=18% Similarity=0.213 Sum_probs=105.1
Q ss_pred cccccCCeEEEcCCeeeeeCCCcEEEEeeee-ccCCceeEEEecCceEE-------------------------------
Q psy16426 4 QGQNVPPMIWIQNQLVGAMEGDQMTLECHSE-AYPKSINYWTKENGEII------------------------------- 51 (194)
Q Consensus 4 ~~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~-g~p~~~v~W~k~~~~l~------------------------------- 51 (194)
+.+..+|.+...+....+..|+.+.|.|.+. +.|.+.+.|++++..+.
T Consensus 112 l~v~~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~ 191 (313)
T 4fqp_A 112 LRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGKN 191 (313)
T ss_dssp ECCBBCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCE
T ss_pred eeeccCCcceecccceEeecCceEEEEEEccCccCCcEEEeecCCccccccceeeeecccccccceeeeecccccccCee
Confidence 3456788888888777888899999999865 67899999999875542
Q ss_pred ---------------------EeeCCeEEecc-ceeEEeeCCeEEEEEEeeccCCC-ccEEEecCcEEeeCCCceeEEec
Q psy16426 52 ---------------------AQVPPMIWIQN-QLVGAMEGDQMTLECHSEAYPKS-INYWTKENGEIIAQGSKYEPILL 108 (194)
Q Consensus 52 ---------------------v~~~p~i~~~~-~~~~~~~g~~~~l~C~~~~~p~p-~v~W~~~~~~~~~~~~~~~~~~~ 108 (194)
|.++|.+.+.. ....+..|+.+.|.|.+.|+|.| .+.|+++ +..+.... ..
T Consensus 192 Y~C~a~n~~~~~~~~~~~~l~V~~~P~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~~-~~~l~~~~----~~- 265 (313)
T 4fqp_A 192 VTCKVEHESFEKPQLLTVNLTVYYPPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTT-MGPLPPFA----VA- 265 (313)
T ss_dssp EEEEEECTTSSSCEEEEEECCBCEEEEEEEECCCSCEETTCCCEEEEEEEEEESCCCEEEEEET-TBSCCTTE----EE-
T ss_pred EEEEEEccCcCccceeeeecccccCCccccccccceeecCCCeEEEEEEecCCCCCcEEEEEEC-CEECCCce----EE-
Confidence 33345443322 23334567889999999999988 4899994 44333221 11
Q ss_pred CCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEcccCCC
Q psy16426 109 DNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGKKKKK 155 (194)
Q Consensus 109 ~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~p~ 155 (194)
. ..+|.|.++..+|.|.|+|.|.|..|...+.+.|.|.+.|+
T Consensus 266 ~-----~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~PP 307 (313)
T 4fqp_A 266 Q-----GAQLLIRPVDKPINTTLICNVTNALGARQAELTVQVKEGPP 307 (313)
T ss_dssp E-----TTEEEECCCSSCCEEEEEEEEECSSCEEEEEEEEEEECCC-
T ss_pred e-----CCEEEECcCChhhCEEEEEEEEeCCCcEEEEEEEEEEeCCC
Confidence 1 13899999999999999999999999999999999887654
No 39
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.75 E-value=1.4e-17 Score=128.63 Aligned_cols=136 Identities=21% Similarity=0.280 Sum_probs=99.2
Q ss_pred CeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceEE--------------------------------------
Q psy16426 10 PMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEII-------------------------------------- 51 (194)
Q Consensus 10 P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~-------------------------------------- 51 (194)
|.+...+....+.+|++++|.|.+.|.|.+.+.|++++..+.
T Consensus 109 p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g 188 (304)
T 2yd9_A 109 PNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKYECVATNSAG 188 (304)
T ss_dssp CEEEECCCCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEEECTTSCEEECSCCGGGCEEEEEEEEETTE
T ss_pred CeeecCCccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEEeCCCeEEEEccCCcccCEEEEEEEEeCCC
Confidence 788888888889999999999999999999999999864431
Q ss_pred ----------E---eeCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEE
Q psy16426 52 ----------A---QVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKL 118 (194)
Q Consensus 52 ----------v---~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 118 (194)
| ..+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+.....+. .....|
T Consensus 189 ~~~~~~~~l~v~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~-~~~~l~~~~~~~--------~~~~~L 259 (304)
T 2yd9_A 189 VRYSSPANLYVRVQNVAPRFSILPMSHEIMPGGNVNITCVAVGSPMPYVKWMQ-GAEDLTPEDDMP--------VGRNVL 259 (304)
T ss_dssp EEECCCEEEEEECCCEEEEEEECCCCBCCCTTCCEEEEEEEEEESCCEEEEEE-TTEECSCSSSCC--------BSEEEE
T ss_pred CEEeccEEEEEEeeccCCcEEecCCceEEcCCCeEEEEEEEeeeCCCEEEEEE-CCEECCCccccc--------CCcEEE
Confidence 1 123444444444557789999999999999999999999 555443332211 113467
Q ss_pred EEeecCCCCCeEEEEEEEcCCCceEEEEEEEcccCCCC
Q psy16426 119 TIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGKKKKKK 156 (194)
Q Consensus 119 ~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~p~~ 156 (194)
.|.++ +|.|.|+|.|.|..|...+.+.|.|...+..
T Consensus 260 ~i~~~--~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~ 295 (304)
T 2yd9_A 260 ELTDV--KDSANYTCVAMSSLGVIEAVAQITVKSLPKA 295 (304)
T ss_dssp EECSC--CSCEEEEEEEEETTEEEEEEEEEC-------
T ss_pred EEccc--ccCEEEEEEEEeCCCcEEEEEEEEEecCccc
Confidence 77665 5899999999999999999999988766543
No 40
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.75 E-value=7.9e-18 Score=120.29 Aligned_cols=136 Identities=18% Similarity=0.276 Sum_probs=96.2
Q ss_pred cccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCc-eeEEEecCceEE---------------------------------
Q psy16426 6 QNVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKS-INYWTKENGEII--------------------------------- 51 (194)
Q Consensus 6 v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~-~v~W~k~~~~l~--------------------------------- 51 (194)
|..+|.+...+..+.+.+|++++|.|.+.+.+.+ .+.|++++..+.
T Consensus 1 v~~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~s~~~~ 80 (176)
T 1f2q_A 1 VPQKPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEETNSSLNIVNAKFEDSGEYKCQHQQVNESEPVY 80 (176)
T ss_dssp ---CCCCEEESSCSEEETTCCEEEECCTTCC----CCEEEETTEECSCCSSEEEECSCCGGGCEEEEEECTTSSCCCCEE
T ss_pred CCCCCEEEcCCCCcceecCCcEEEEEeCCCCCCcceEEEEECCeECCCCceEEEEeccceecCEEEEEEcCCccccccEE
Confidence 4568999999988899999999999999988775 699999875532
Q ss_pred --EeeCCeEEeccceeEEeeCCeEEEEEEee-ccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCC
Q psy16426 52 --AQVPPMIWIQNQLVGAMEGDQMTLECHSE-AYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDF 128 (194)
Q Consensus 52 --v~~~p~i~~~~~~~~~~~g~~~~l~C~~~-~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 128 (194)
|..++.+. ......+.+|+.+.|.|.+. +.|.+.+.|++ ++....... . ...|.|.++..+|.
T Consensus 81 l~V~~~~~~~-~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~-~g~~~~~~~-------~-----~~~L~i~~v~~~d~ 146 (176)
T 1f2q_A 81 LEVFSDWLLL-QASAEVVMEGQPLFLRCHGWRNWDVYKVIYYK-DGEALKYWY-------E-----NHNISITNATVEDS 146 (176)
T ss_dssp EEEECSSEEE-EESCSEEETTSCEEEEEEEGGGCCEEEEEEEE-TTEECCSCC-------C-----SSEEEESSCCGGGC
T ss_pred EEEeCcceee-cCCcceeeCCCCEEEEEEecCCCCceEEEEEE-CCEEEeeec-------C-----CCeEEECCCCcccC
Confidence 33233333 22334567999999999995 55667899999 555442111 1 23899999999999
Q ss_pred eEEEEEEEcCCCc-eEEEEEEEcccCCC
Q psy16426 129 GAYKCVSKNSLGD-TDGSIKLYGKKKKK 155 (194)
Q Consensus 129 g~y~C~a~n~~g~-~~~~~~l~v~~~p~ 155 (194)
|.|+|.+.|..+. ....+.|.|...|.
T Consensus 147 G~Y~C~a~n~~~~~~s~~~~l~V~~~p~ 174 (176)
T 1f2q_A 147 GTYYCTGKVWQLDYESEPLNITVIKAPR 174 (176)
T ss_dssp EEEEEEEEETTEEEECCCEEEEEECSCC
T ss_pred EEEEEEEEeCCcceEecCEEEEEecCCC
Confidence 9999999997443 33457777766653
No 41
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.75 E-value=2.7e-17 Score=130.64 Aligned_cols=134 Identities=23% Similarity=0.356 Sum_probs=106.2
Q ss_pred CCeEEEc-CCeeeeeCCCcEEEEeeeeccCCceeEEEecCceEE------------------------------------
Q psy16426 9 PPMIWIQ-NQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEII------------------------------------ 51 (194)
Q Consensus 9 ~P~~~~~-~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~------------------------------------ 51 (194)
+|.+... +....+.+|++++|.|.+.+.|.+.+.|+++++.+.
T Consensus 206 ~P~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~ 285 (382)
T 1cs6_A 206 APSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKWRKLDGSQTSKWLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTY 285 (382)
T ss_dssp EEEEEECCCSEEEEETTCCEEEECEEEEESCCEEEEEECCSCCSCCCSBSSSEEEECSCCGGGCEEEEEEEEETTEEEEE
T ss_pred CCceeccCCCceEEeCCCeEEEEEEEccCCCCEEEEEECCcccccEEecCCcEEEEccCChhhCEEEEEEEEcCCCeEEE
Confidence 5666553 467788999999999999999999999999765431
Q ss_pred -----EeeCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCC
Q psy16426 52 -----AQVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQ 126 (194)
Q Consensus 52 -----v~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 126 (194)
|..+|.+........+..|+.+.|.|.+.+.|.|.+.|++ ++..+....++. ..+ +.|.|.++..+
T Consensus 286 ~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~-~g~~~~~~~~~~--~~~------~~L~i~~v~~~ 356 (382)
T 1cs6_A 286 QGRIIIHAQPDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLR-DGQPLASQNRIE--VSG------GELRFSKLVLE 356 (382)
T ss_dssp EEEEEEEEEEEEEECCCCEEEETTCCEEEECEEEEESCCEEEEEE-TTEECCCCSSEE--EET------TEEEESSCCGG
T ss_pred EEEEEEecCCCcccCCCccEEcCCCeEEEEEEeeeecCCEEEEEE-CCEECCCCceEE--EEC------CEEEECcCCcc
Confidence 4445666555556677889999999999999999999999 555554444432 111 38999999999
Q ss_pred CCeEEEEEEEcCCCceEEEEEEEcc
Q psy16426 127 DFGAYKCVSKNSLGDTDGSIKLYGK 151 (194)
Q Consensus 127 d~g~y~C~a~n~~g~~~~~~~l~v~ 151 (194)
|.|.|+|.|.|..|...+.+.|.|.
T Consensus 357 d~G~Y~C~a~N~~G~~~~~~~l~V~ 381 (382)
T 1cs6_A 357 DSGMYQCVAENKHGTVYASAELTVQ 381 (382)
T ss_dssp GCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred cCEEEEEEEEeCCCeEEEEEEEEEe
Confidence 9999999999999999988888774
No 42
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.75 E-value=1.3e-17 Score=128.75 Aligned_cols=131 Identities=22% Similarity=0.289 Sum_probs=96.5
Q ss_pred ccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceEE-----------------------------------
Q psy16426 7 NVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEII----------------------------------- 51 (194)
Q Consensus 7 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~----------------------------------- 51 (194)
..||.|...+.+..+.+|++++|.|.+.|.|.+.|.|++++..+.
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~g~~i~~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a 83 (304)
T 2yd9_A 4 EEPPRFIKEPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNSQRFETIEFDESAGAVLRIQPLRTPRDENVYECVA 83 (304)
T ss_dssp CCCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEC-------CTTEEEEEETTTTEEEEEECSCCTTTTCSEEEEEE
T ss_pred ccCCeeeecCCceEecCCCeEEEEEEEEEeCCCeEEEEECCEECCCCceEEEEecCCCceEEEEecccccCCCeEEEEEE
Confidence 578999999999999999999999999999999999999764321
Q ss_pred --------------EeeC-------CeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCC-CceeEEecC
Q psy16426 52 --------------AQVP-------PMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQG-SKYEPILLD 109 (194)
Q Consensus 52 --------------v~~~-------p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~-~~~~~~~~~ 109 (194)
|..+ |.+...+....+..|+.+.|.|.+.+.|.+.+.|++ ++...... .........
T Consensus 84 ~n~~g~~~~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k-~~~~~~~~~~~~~~~~~~ 162 (304)
T 2yd9_A 84 QNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFK-DFLPVDPSASNGRIKQLR 162 (304)
T ss_dssp ECSSCEECCEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSCCEEEEEE-TTEECCGGGGTTSEEECT
T ss_pred ECCCCeEEEEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCCCeEEEEE-CCEECcCCCCcceEEeCC
Confidence 2222 445545555667789999999999999999999999 44443322 111111222
Q ss_pred CceeEEEEEEEeecCCCCCeEEEEEEEcCCCceE
Q psy16426 110 NAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTD 143 (194)
Q Consensus 110 ~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~ 143 (194)
. ..|.|.++..+|.|.|+|.+.|..|...
T Consensus 163 ~-----~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 191 (304)
T 2yd9_A 163 S-----GALQIESSEETDQGKYECVATNSAGVRY 191 (304)
T ss_dssp T-----SCEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred C-----eEEEEccCCcccCEEEEEEEEeCCCCEE
Confidence 2 2899999999999999999999988765
No 43
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.75 E-value=4.2e-17 Score=120.02 Aligned_cols=133 Identities=18% Similarity=0.203 Sum_probs=96.9
Q ss_pred CCeEEEcCCeeeeeCCCcEEEEeeeec-cCCceeEEEecCceEE--------------------------------E---
Q psy16426 9 PPMIWIQNQLVGAMEGDQMTLECHSEA-YPKSINYWTKENGEII--------------------------------A--- 52 (194)
Q Consensus 9 ~P~~~~~~~~~~v~~G~~v~L~C~~~g-~p~~~v~W~k~~~~l~--------------------------------v--- 52 (194)
+|.|... .+..+.+|+.+.|.|.+.+ .|.|.|+|++|+..+. .
T Consensus 3 ~p~~~~~-~~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~ 81 (207)
T 3rbs_A 3 DPFTKSE-LAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQ 81 (207)
T ss_dssp ---CCEE-EEEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEE
T ss_pred CCeeecC-CceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEE
Confidence 3555433 3578899999999999864 7999999999876652 0
Q ss_pred --------e-------------------------eCCeEEeccceeEEeeCCeEEEEEEeecc-CCCccEEEecCcEEee
Q psy16426 53 --------Q-------------------------VPPMIWIQNQLVGAMEGDQMTLECHSEAY-PKSINYWTKENGEIIA 98 (194)
Q Consensus 53 --------~-------------------------~~p~i~~~~~~~~~~~g~~~~l~C~~~~~-p~p~v~W~~~~~~~~~ 98 (194)
. .+|.+.... ...+.+|+.+.|.|.+.+. |.|.+.|++ ++..+.
T Consensus 82 Ng~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~-~~~v~~g~~v~l~C~v~g~~P~p~i~W~k-~g~~l~ 159 (207)
T 3rbs_A 82 DGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYK-DEREIS 159 (207)
T ss_dssp ETTEEEEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEE-EEEEETTTEEEEEEEEESCCTTCEEEEEE-TTEEEC
T ss_pred CCCeEEEEEEEEEccchhhhcccccccccccccCCCCceEecC-CcEEcCCCcEEEEEEEeCCCCCCEEEEEE-CCEECC
Confidence 0 023333222 2456789999999999998 899999999 555554
Q ss_pred CCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEc
Q psy16426 99 QGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYG 150 (194)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v 150 (194)
...++. . . ....+|.|.++..+|.|.|+|.|.|..|...++..|.+
T Consensus 160 ~~~~~~--~-~---~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~~ 205 (207)
T 3rbs_A 160 VDEKHD--F-K---DGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVD 205 (207)
T ss_dssp CCCCCC--C-S---SEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEECC
T ss_pred CCCceE--c-C---CCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEec
Confidence 433321 1 1 12458999999999999999999999999999888865
No 44
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.74 E-value=1.2e-17 Score=120.94 Aligned_cols=134 Identities=25% Similarity=0.358 Sum_probs=99.9
Q ss_pred CCeEEEcCCeeeeeCCCcEEEEee-eeccCC-ceeEEEecCceEE-----------------------------------
Q psy16426 9 PPMIWIQNQLVGAMEGDQMTLECH-SEAYPK-SINYWTKENGEII----------------------------------- 51 (194)
Q Consensus 9 ~P~~~~~~~~~~v~~G~~v~L~C~-~~g~p~-~~v~W~k~~~~l~----------------------------------- 51 (194)
|+.....+.++.+.+|+++.|.|. +.+.|. +.+.|++++..+.
T Consensus 8 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~ 87 (201)
T 3s97_C 8 DPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSS 87 (201)
T ss_dssp CCCCSSCCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEE
T ss_pred CccCcCCCceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEe
Confidence 333334457788999999999999 888888 9999999875531
Q ss_pred ---------------E-------eeCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecC
Q psy16426 52 ---------------A-------QVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLD 109 (194)
Q Consensus 52 ---------------v-------~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~ 109 (194)
+ ..+|.+........+..|+.+.|.|.+.+.|.|.+.|+++ +..+.... . ....
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~-~~~~~~~~--~-~~~~ 163 (201)
T 3s97_C 88 PSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKV-LEPMPSTA--E-ISTS 163 (201)
T ss_dssp GGGTEEEECCCEEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEEEEESCCEEEEEET-TBCCCTTC--E-EETT
T ss_pred cCCCcchhhcccceeeccccccCCCCCceEecCCceEEecCCcEEEEEEccCCCCCceEEEeC-CCcCCCce--e-ecCC
Confidence 0 0233344333456678899999999999999999999994 44333221 1 1222
Q ss_pred CceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEcc
Q psy16426 110 NAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGK 151 (194)
Q Consensus 110 ~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~ 151 (194)
. ..|.|.++..+|.|.|+|.+.|..|.....+.|.|.
T Consensus 164 ~-----~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 164 G-----AVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp T-----TEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred C-----CEEEEccCChhhCEEEEEEEEecCCceeeeEEEEEe
Confidence 2 389999999999999999999999999888888764
No 45
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.74 E-value=3.7e-17 Score=125.31 Aligned_cols=149 Identities=17% Similarity=0.237 Sum_probs=104.6
Q ss_pred cccccCCeEEEcCCeeeeeCCCcEEEEeeeeccCC-ceeEEEe-cCceEE------------------------------
Q psy16426 4 QGQNVPPMIWIQNQLVGAMEGDQMTLECHSEAYPK-SINYWTK-ENGEII------------------------------ 51 (194)
Q Consensus 4 ~~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~-~~v~W~k-~~~~l~------------------------------ 51 (194)
+.|..+|.+...+....+.+|++++|.|.+.+ |. +.+.|++ ++..+.
T Consensus 86 l~V~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~~~~~~~~~~~L~i~~v~~~d~G~~Y~C~ 164 (290)
T 2o26_X 86 VFVRDPAKLFLVGLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPTDLTFVPNPKAGITIKNVKRAYHRLCVRCA 164 (290)
T ss_dssp EEEECSSCCBCCCCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCTTCEEEEETTTEEEEESCCGGGTTCEEEEE
T ss_pred EEEeCCCcccccccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCCCCceeeCCCCCEEEecccHHHCCCEEEEE
Confidence 34556666656667788899999999999996 67 8999964 432221
Q ss_pred ----------------Ee----eCCeEEeccceeEEeeCCeEEEEEEeeccCCCc-cEEEecCcEE---eeCCCceeEEe
Q psy16426 52 ----------------AQ----VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSI-NYWTKENGEI---IAQGSKYEPIL 107 (194)
Q Consensus 52 ----------------v~----~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~-v~W~~~~~~~---~~~~~~~~~~~ 107 (194)
|. .+|.+...+....+.+|+.+.|.|.+.+.|.|. +.|++++..+ ........ ..
T Consensus 165 a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~-~~ 243 (290)
T 2o26_X 165 AQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHIAQVKHNSW-HR 243 (290)
T ss_dssp EEETTEEEECCCEEEEEECCCCSCCEEECSCSBCCCCTTCCEEEEEEEEESSTTCEEEEEEESSSEEECCCEECCEE-EE
T ss_pred EEECCceEEeEEEEEEEEeCCCCCCccccCCCcceEecCCcEEEEEEEecCCcceeEEEecCCCCCccceeeccccc-cc
Confidence 22 355555555555678899999999999999887 9999955442 11111111 11
Q ss_pred cCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEcccCC
Q psy16426 108 LDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGKKKK 154 (194)
Q Consensus 108 ~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~p 154 (194)
........+.|.|.++..+|.|.|+|.|.|..|.....+.|.|.+.|
T Consensus 244 ~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P 290 (290)
T 2o26_X 244 GDFNYERQETLTISSARVDDSGVFMCYANNTFGSANVTTTLKVVEKG 290 (290)
T ss_dssp ETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEECC----
T ss_pred CceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcEEEEEEEEEEeCC
Confidence 11123446799999999999999999999999999999999887654
No 46
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.74 E-value=5.9e-17 Score=129.00 Aligned_cols=126 Identities=21% Similarity=0.331 Sum_probs=100.3
Q ss_pred cCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceE-------------------E------------------------
Q psy16426 15 QNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEI-------------------I------------------------ 51 (194)
Q Consensus 15 ~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l-------------------~------------------------ 51 (194)
.+.+..+.+|++++|.|.+.|.|.+.+.|++++..+ .
T Consensus 218 ~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 297 (395)
T 1bih_A 218 VSKDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQ 297 (395)
T ss_dssp ECCSEEEETTSCEEEEEEEECSSCCCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCE
T ss_pred cCCceEEECCCcEEEEEEeccCCCCeEEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCce
Confidence 356678999999999999999999999999987443 1
Q ss_pred -------EeeCCeEEeccce-eEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeec
Q psy16426 52 -------AQVPPMIWIQNQL-VGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAV 123 (194)
Q Consensus 52 -------v~~~p~i~~~~~~-~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~ 123 (194)
|..+|.+...+.. ..+..|+.+.|.|.+.|.|.|.+.|++ ++..+... ++. ..+ ..|.|.++
T Consensus 298 ~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~-~g~~~~~~-~~~--~~~------~~L~i~~~ 367 (395)
T 1bih_A 298 KHSLKLTVVSAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSH-NAKPLSGG-RAT--VTD------SGLVIKGV 367 (395)
T ss_dssp EEEEEEEEEEEEEEEECCCSEEEECTTSCEEEECEEEEESCCCCEEEE-TTEECCSS-SEE--EET------TEEEESSC
T ss_pred EEEEEEEEEcCCccccCCCcceEecCCCeEEEEEEECcccCCeeEEEE-CCEECCCC-ceE--EEC------CEEEEeeC
Confidence 4455666555544 667889999999999999999999999 55554333 332 222 28999999
Q ss_pred CCCCCeEEEEEEEcCCCceEEEEEEEc
Q psy16426 124 TKQDFGAYKCVSKNSLGDTDGSIKLYG 150 (194)
Q Consensus 124 ~~~d~g~y~C~a~n~~g~~~~~~~l~v 150 (194)
..+|.|.|+|.|.|..|.....+.|.|
T Consensus 368 ~~~d~G~Y~C~a~N~~G~~~~~~~l~V 394 (395)
T 1bih_A 368 KNGDKGYYGCRATNEHGDKYFETLVQV 394 (395)
T ss_dssp CSTTCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CcccCEEEEEEEEccCCCceEEEEEEE
Confidence 999999999999999999988888876
No 47
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.73 E-value=1.2e-16 Score=118.36 Aligned_cols=136 Identities=17% Similarity=0.158 Sum_probs=87.0
Q ss_pred cCCeeeeeCCCcEEEEeeeeccCCc---eeEEEecCceE-------------------------------------E---
Q psy16426 15 QNQLVGAMEGDQMTLECHSEAYPKS---INYWTKENGEI-------------------------------------I--- 51 (194)
Q Consensus 15 ~~~~~~v~~G~~v~L~C~~~g~p~~---~v~W~k~~~~l-------------------------------------~--- 51 (194)
+.+++.+.+|++|+|.|.+.+.+.+ .|.|++++... .
T Consensus 10 P~~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~ 89 (226)
T 4f80_A 10 PSGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHN 89 (226)
T ss_dssp CSSCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESS
T ss_pred CCCCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEee
Confidence 3456789999999999999876544 69999865321 1
Q ss_pred -------------------------EeeCCeEEeccceeEEeeCCeEEEEEEeec-cCCCccEEEecCcEEeeCCCceeE
Q psy16426 52 -------------------------AQVPPMIWIQNQLVGAMEGDQMTLECHSEA-YPKSINYWTKENGEIIAQGSKYEP 105 (194)
Q Consensus 52 -------------------------v~~~p~i~~~~~~~~~~~g~~~~l~C~~~~-~p~p~v~W~~~~~~~~~~~~~~~~ 105 (194)
+..++.+........+..|..+.|.|.+.+ .|.|.+.|+++++...........
T Consensus 90 v~~~D~G~Y~C~a~n~~~~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~~~~~ 169 (226)
T 4f80_A 90 VTASDSGKYLCYFQDGDFYEKALVELKVAALGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAPVV 169 (226)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCEECCCE
T ss_pred CchHHCeeEEEEEECCCcEEEEEEEEeeccceecccceeeeccCCceeeEEEeccCCCCCEEEEEECCceEcCCCceEEE
Confidence 111111111223344678999999999988 489999999866555433222111
Q ss_pred EecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEcccC
Q psy16426 106 ILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGKKK 153 (194)
Q Consensus 106 ~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~ 153 (194)
...++.+ ..+.+..+..+|.|+|+|.|.|..|.......|.|.++
T Consensus 170 ~~~~g~~---~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v~ep 214 (226)
T 4f80_A 170 ADGVGLY---AVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISIADP 214 (226)
T ss_dssp ECTTSCE---EEEEEEEECC----CEEEEEEETTTTEEEEEEECCCTT
T ss_pred ECCCCcE---EEEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEECCC
Confidence 1222222 23445567788999999999999999999988888654
No 48
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.73 E-value=5.1e-17 Score=115.06 Aligned_cols=129 Identities=16% Similarity=0.246 Sum_probs=94.8
Q ss_pred cCCeEEEcCCeeeeeCCCcEEEEeeeeccC-CceeEEEecCceEE-----------------------------------
Q psy16426 8 VPPMIWIQNQLVGAMEGDQMTLECHSEAYP-KSINYWTKENGEII----------------------------------- 51 (194)
Q Consensus 8 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p-~~~v~W~k~~~~l~----------------------------------- 51 (194)
.+|.+...+....+.+|++++|.|.+.+.| .+.+.|++++..+.
T Consensus 3 p~p~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~~~~~~~~~~~~~d~G~Y~C~~~~~~~s~~~~l~ 82 (170)
T 3ry4_A 3 PKAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSLSDPVHLT 82 (170)
T ss_dssp CBCEEEEESCCSEEETTCEEEEEEESCCCSSSSCEEEEETTEECTTCCSSEEEEECCGGGCEEEEEEETTSBCCCCEEEE
T ss_pred CCCEEEeCCCCeEEECCCcEEEEEEecCCCCcceEEEEECCeEcccCccceEEEecccccCeEEEEEEeCCCceEeEEEE
Confidence 357788888878899999999999999886 67999999875542
Q ss_pred EeeCCeEEeccceeEEeeCCeEEEEEEee-ccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeE
Q psy16426 52 AQVPPMIWIQNQLVGAMEGDQMTLECHSE-AYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGA 130 (194)
Q Consensus 52 v~~~p~i~~~~~~~~~~~g~~~~l~C~~~-~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~ 130 (194)
|..++.+.. .....+.+|+.+.|.|.+. +.|.+.+.|++ ++...... .. ...|.|.++..+|.|.
T Consensus 83 v~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~-~g~~~~~~-------~~-----~~~L~i~~v~~~d~G~ 148 (170)
T 3ry4_A 83 VLFEWLVLQ-TPHLEFQEGETIMLRCHSWKDKPLVKVTFFQ-NGKSQKFS-------HL-----DPTFSIPQANHSHSGD 148 (170)
T ss_dssp EECCSEEEE-CSCSEECTTCCEEEEEEEGGGCCEEEEEEEE-TTEEEEEE-------SS-----CCEEEESSCCGGGCEE
T ss_pred EECCceEec-CCCceeecCCeEEEEEECCCCCCCceEEEEE-CCeEcccc-------CC-----CCeEEEEeccccCCEE
Confidence 333443332 2345567899999999995 44568899999 55443211 11 2379999999999999
Q ss_pred EEEEEEcCCCce-EEEEEEEc
Q psy16426 131 YKCVSKNSLGDT-DGSIKLYG 150 (194)
Q Consensus 131 y~C~a~n~~g~~-~~~~~l~v 150 (194)
|+|.+.|..|.. ...+.|.|
T Consensus 149 Y~C~a~n~~g~~~s~~~~l~V 169 (170)
T 3ry4_A 149 YHCTGNIGYTLFSSKPVTITV 169 (170)
T ss_dssp EEEEEEETTEEEECCCEEEEE
T ss_pred EEEEEEeCcCccccccEEEEE
Confidence 999999998863 34455554
No 49
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.71 E-value=3.5e-16 Score=114.05 Aligned_cols=131 Identities=14% Similarity=0.206 Sum_probs=90.1
Q ss_pred cCCeeeeeCCCcEEEEeeeeccCCc---eeEEEecCceE--------------------------------------E--
Q psy16426 15 QNQLVGAMEGDQMTLECHSEAYPKS---INYWTKENGEI--------------------------------------I-- 51 (194)
Q Consensus 15 ~~~~~~v~~G~~v~L~C~~~g~p~~---~v~W~k~~~~l--------------------------------------~-- 51 (194)
.+..+.+.+|++++|.|.+.+.|.+ .|.|++++..+ .
T Consensus 5 ~p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~ 84 (218)
T 4frw_A 5 TSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLR 84 (218)
T ss_dssp CCSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEES
T ss_pred CCCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEe
Confidence 4566789999999999999987655 48999875321 0
Q ss_pred -----------------------------EeeCC-eEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCC
Q psy16426 52 -----------------------------AQVPP-MIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGS 101 (194)
Q Consensus 52 -----------------------------v~~~p-~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~ 101 (194)
+..++ ..........+..+..+.+.|.+.+.|+|.+.|++++..+....
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~~~~- 163 (218)
T 4frw_A 85 NAVQADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTAEGSPAPSVTWDTEVKGTTSSR- 163 (218)
T ss_dssp SCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEEEEEEEEEBSCCEEEEEESSCCEEEEE-
T ss_pred eccHHHCCceeEEEEeccCceeeeEEEEEEeeeccceeeeeeeeeeeeccccceeeeccCCcCceEEEEECCcccccCc-
Confidence 11111 11122233344568889999999999999999999544333211
Q ss_pred ceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEE
Q psy16426 102 KYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLY 149 (194)
Q Consensus 102 ~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~ 149 (194)
. ...+..+...+.|.|.++...|.|.|+|.|.|..|.....+.+.
T Consensus 164 ~---~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~ 208 (218)
T 4frw_A 164 S---FKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHI 208 (218)
T ss_dssp E---EECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEE
T ss_pred e---EecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEE
Confidence 1 12233344567899999999999999999999998766544443
No 50
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.71 E-value=9.2e-17 Score=116.71 Aligned_cols=129 Identities=15% Similarity=0.155 Sum_probs=81.3
Q ss_pred ccccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceEE---------------------------------
Q psy16426 5 GQNVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEII--------------------------------- 51 (194)
Q Consensus 5 ~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~--------------------------------- 51 (194)
|...+|.|...+.. .+.+|++++|.|.+.+.+. .+.|++++..+.
T Consensus 1 g~~~~P~i~~~p~~-~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 78 (196)
T 2d3v_A 1 GNLSKATLWAEPGS-VISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQNPLEPKNKARFSIPSMTEHHAGRYRCYYY 78 (196)
T ss_dssp --CCBCEEEEESCS-EEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEECCCSSTTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCCCCEEEeCCCC-cccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcccccccCCccccEEEeccCChhHCeEEEEEEe
Confidence 35678999988874 7899999999999998765 999999875431
Q ss_pred ---------------Eee---CCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCcee
Q psy16426 52 ---------------AQV---PPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYK 113 (194)
Q Consensus 52 ---------------v~~---~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~ 113 (194)
|.. +|.+...+ ...+.+|+.+.|.|.+.+.| +.+.|+++ +...............+ .
T Consensus 79 n~~g~~~~s~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~p-~~~~W~k~-g~~~~~~~~~~~~~~~~--~ 153 (196)
T 2d3v_A 79 SPAGWSEPSDPLELVVTGFYNKPTLSALP-SPVVTSGENVTLQCGSRLRF-DRFILTEE-GDHKLSWTLDSQLTPSG--Q 153 (196)
T ss_dssp ETTEECBCCCCEEEEEECSSCCCEEEC------------CEEEEEESSCC-SEEEEEEC----CCEEEEECEECTTS--C
T ss_pred CCCCcCCcCccEEEEecCCCCCCeEEccC-CccccCCCcEEEEEEcCCCC-CEEEEEcc-CCcccccccccccccCC--C
Confidence 221 23333222 23567899999999999888 88999994 43321110000011111 1
Q ss_pred EEEEEEEeecCCCCCeEEEEEEEcCCC
Q psy16426 114 IHMKLTIKAVTKQDFGAYKCVSKNSLG 140 (194)
Q Consensus 114 ~~~~L~i~~~~~~d~g~y~C~a~n~~g 140 (194)
....|.|.+++.+|.|.|+|.|.|..+
T Consensus 154 ~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 154 FQALFPVGPVTPSHRWMLRCYGSRRHI 180 (196)
T ss_dssp EEEEEECCCCBTTBCEEEEEEEEETTE
T ss_pred ceeEEEeeecCcccCeeEEEEEEccCC
Confidence 246899999999999999999999764
No 51
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.71 E-value=1.8e-16 Score=119.33 Aligned_cols=135 Identities=19% Similarity=0.236 Sum_probs=102.8
Q ss_pred CCeEEEcCCeeeeeCCCcEEEEeeeeccCCc-eeEEEecCceEE-----------------------------------E
Q psy16426 9 PPMIWIQNQLVGAMEGDQMTLECHSEAYPKS-INYWTKENGEII-----------------------------------A 52 (194)
Q Consensus 9 ~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~-~v~W~k~~~~l~-----------------------------------v 52 (194)
+|.|...+.+..+.+|++++|.|.+.+.|.+ .+.|++++..+. |
T Consensus 1 kP~i~~~p~~~~v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~s~~~~l~v 80 (262)
T 3rjd_A 1 KAVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTSTPSYRITSASVNDSGEYRCQRGLSGRSDPIQLEI 80 (262)
T ss_dssp CCEEEESSCCSEEETTCCEEEEEECSSCCCTTCEEEEETTEECSCCSSEEEESSCCGGGCEEEEEEESSSCCCCCEEEEE
T ss_pred CCeEecCCCcEEeeCCCeEEEEEECCCCCCCceEEEEECCEEeeccCCeEEEecCCcccCeEEEEEEecCCccccEEEEE
Confidence 5889999998899999999999999998877 999999876552 3
Q ss_pred eeCCeEEeccceeEEeeCCeEEEEEEe-eccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEE
Q psy16426 53 QVPPMIWIQNQLVGAMEGDQMTLECHS-EAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAY 131 (194)
Q Consensus 53 ~~~p~i~~~~~~~~~~~g~~~~l~C~~-~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y 131 (194)
..++.+ ..+....+.+|+.+.|.|.+ .+.|.+.+.|++ ++...... .....|.|.++..+|.|.|
T Consensus 81 ~~~~~~-~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~-~g~~~~~~------------~~~~~l~i~~~~~~d~G~Y 146 (262)
T 3rjd_A 81 HRGWLL-LQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYR-NGKAFKFF------------HWNSNLTILKTNISHNGTY 146 (262)
T ss_dssp ECSSEE-EEESCSEEETTSCEEEEEEEGGGCCCEEEEEEE-TTEEEEEE------------EECCCEEESSCCGGGCEEE
T ss_pred eccceE-ecCCCeEEecCCeEEEEEEccCCCCCceEEEEE-CCcccccc------------CCCCeEEEEECChhhCEEE
Confidence 333332 23344557789999999999 667778899998 44443211 0124789999999999999
Q ss_pred EEEEEcCCCceEEEEEEEcccCCCCC
Q psy16426 132 KCVSKNSLGDTDGSIKLYGKKKKKKK 157 (194)
Q Consensus 132 ~C~a~n~~g~~~~~~~l~v~~~p~~p 157 (194)
+|.+.|..+.....+.|.|...+..|
T Consensus 147 ~C~~~n~~~~~~~~~~l~V~~~~~~p 172 (262)
T 3rjd_A 147 HCSGMGKHRYTSAGISVTVKELFPAP 172 (262)
T ss_dssp EEEEESSSEEEEECEEEEEECSSCCC
T ss_pred EEEEeCCCCccccceEEEeccCCCCC
Confidence 99999998777777777776643333
No 52
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.71 E-value=5.6e-18 Score=123.41 Aligned_cols=142 Identities=20% Similarity=0.377 Sum_probs=98.5
Q ss_pred cCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceE-------------------------E-----------
Q psy16426 8 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEI-------------------------I----------- 51 (194)
Q Consensus 8 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l-------------------------~----------- 51 (194)
.++.+...+.++.+.+|+++.|.|.+.+.|.+.+.|++++..+ .
T Consensus 3 ~~~~i~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~~~~~d~G~ 82 (209)
T 1nbq_A 3 GSVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDTGT 82 (209)
T ss_dssp CCCEEECSCSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEETTEEECSCCCTTSCSE
T ss_pred ceEEEEcCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeeccEEEEeeCCHHHCcE
Confidence 4677888888889999999999999999999999999976542 0
Q ss_pred ---------------------EeeCCeEEeccceeEEeeCCeEEEEEEe-eccCCCccEEEecCcEEeeCCCceeEEecC
Q psy16426 52 ---------------------AQVPPMIWIQNQLVGAMEGDQMTLECHS-EAYPKSINYWTKENGEIIAQGSKYEPILLD 109 (194)
Q Consensus 52 ---------------------v~~~p~i~~~~~~~~~~~g~~~~l~C~~-~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~ 109 (194)
|..+|.+........+..|+.+.|.|.+ .+.|.|.+.|++ ++..+............
T Consensus 83 Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~ 161 (209)
T 1nbq_A 83 YTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFK-DGIVMPTNPKSTRAFSN 161 (209)
T ss_dssp EEEEEEETTSSCEECCEEECCEEBCCCCCCCCCBSEEETTSCEEECCCCCSCBSCCEEEEEE-TTCCCCSCSSSSSSCTT
T ss_pred EEEEEecCCCCccceEEEEEEEecCCcCCCcccccceecCCEEEEEEeCCCCCCCceeEEEE-CCeeCCCccccceeeec
Confidence 2223332222233456789999999996 889999999999 44433322211000000
Q ss_pred Cce---eEEEEEEEeecCCCCCeEEEEEEEcCCCceE--EEEEEEc
Q psy16426 110 NAY---KIHMKLTIKAVTKQDFGAYKCVSKNSLGDTD--GSIKLYG 150 (194)
Q Consensus 110 ~~~---~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~--~~~~l~v 150 (194)
..+ ...+.|.|.++..+|.|.|+|.|.|..|... ..+.|.|
T Consensus 162 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~v~l~V 207 (209)
T 1nbq_A 162 SSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTSNAVRMEA 207 (209)
T ss_dssp CCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCCEECCCBCCEE
T ss_pred cceEEcCCcceEEEEeccccCCeEEEEEEeCCcCcccccccEEEEE
Confidence 000 0134899999999999999999999999883 3344444
No 53
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.71 E-value=2.1e-16 Score=115.45 Aligned_cols=86 Identities=24% Similarity=0.324 Sum_probs=68.9
Q ss_pred ceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCce
Q psy16426 63 QLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDT 142 (194)
Q Consensus 63 ~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~ 142 (194)
....+..|+.+.|.|.+.+.|.|.+.|++ ++..+....++.....+.. .+.|.|.++..+|.|.|+|.|.|..|..
T Consensus 125 ~~~~v~~g~~~~l~C~~~g~p~p~v~W~~-~~~~~~~~~~~~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~a~N~~g~~ 200 (212)
T 2r15_A 125 DVVTIQEGKALNLTCNVWGDPPPEVSWLK-NEKALAQTDHCNLKFEAGR---TAYFTINGVSTADSGKYGLVVKNKYGSE 200 (212)
T ss_dssp SEEEEETTCCEEEEEEEECSSCCEEEEEE-TTEEECCCSSEEEEEETTT---EEEEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred CcEEEccCCeEEEEEEEcCCCCceEEEEE-CCeECccCCCEEEEEcCCC---EEEEEEcCcchHHCeEEEEEEEcCCCcE
Confidence 35667889999999999999999999999 5665555555543333222 4699999999999999999999999999
Q ss_pred EEEEEEEccc
Q psy16426 143 DGSIKLYGKK 152 (194)
Q Consensus 143 ~~~~~l~v~~ 152 (194)
...+.|.|..
T Consensus 201 ~~~~~l~V~~ 210 (212)
T 2r15_A 201 TSDFTVSVFI 210 (212)
T ss_dssp EEEEEEEEEC
T ss_pred EEEEEEEEEc
Confidence 8888888763
No 54
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.71 E-value=2.1e-16 Score=116.35 Aligned_cols=140 Identities=14% Similarity=0.157 Sum_probs=93.0
Q ss_pred EcCCeeeeeCC--CcEEEEeeeeccCCceeEEEec--CceEE--------------------------------------
Q psy16426 14 IQNQLVGAMEG--DQMTLECHSEAYPKSINYWTKE--NGEII-------------------------------------- 51 (194)
Q Consensus 14 ~~~~~~~v~~G--~~v~L~C~~~g~p~~~v~W~k~--~~~l~-------------------------------------- 51 (194)
..+..+.+.+| ++++|.|.+.+ |.+.++|+++ ++.++
T Consensus 12 ~~p~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~n~~~~~ 90 (213)
T 2x1w_L 12 DQHGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISWDSKKGFTIPSYMISYAGMVFCEAKINDESY 90 (213)
T ss_dssp --CEEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCSSSCEEETTTEEEEEGGGTTTCSEEEEEEC----CE
T ss_pred CCceEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCCCcccccCCccEEEccCChhcCceEEEEEEECCeeE
Confidence 34567889999 99999999987 6789999985 33221
Q ss_pred --------Eee--CCeEEecc-ceeEEeeCCeEEEEEEeeccCC--CccEEEecCcEEeeCCCc-eeEEecCC---ceeE
Q psy16426 52 --------AQV--PPMIWIQN-QLVGAMEGDQMTLECHSEAYPK--SINYWTKENGEIIAQGSK-YEPILLDN---AYKI 114 (194)
Q Consensus 52 --------v~~--~p~i~~~~-~~~~~~~g~~~~l~C~~~~~p~--p~v~W~~~~~~~~~~~~~-~~~~~~~~---~~~~ 114 (194)
|.. +|.+...+ ..+.+.+|+.+.|.|.+.+.|. +.+.|++++..+. .... ........ ....
T Consensus 91 ~s~~~~l~v~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~-~~~~~~~~~~~~~~~~~~~~ 169 (213)
T 2x1w_L 91 QSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQ-HKKLVNRDLKTQSGSEMKKF 169 (213)
T ss_dssp ECCCEEEEECBCCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCC-SEEEEEEEECCCSSCSCEEE
T ss_pred EEEEEEEEEeCCcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccc-eEEEeccccccccCccceee
Confidence 111 12222222 3336789999999999998653 4688998543321 1000 00000001 0334
Q ss_pred EEEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEcccCCC
Q psy16426 115 HMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGKKKKK 155 (194)
Q Consensus 115 ~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~p~ 155 (194)
.++|.|.+++.+|.|.|+|.|.|..|...+.+.|.|.+.|.
T Consensus 170 ~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~ 210 (213)
T 2x1w_L 170 LSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEDPI 210 (213)
T ss_dssp EEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC---
T ss_pred eEEEEECCCCcccCEEEEEEEecCCCcEEEEEEEEEecccc
Confidence 56899999999999999999999999999999999887654
No 55
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.71 E-value=2.2e-16 Score=120.74 Aligned_cols=138 Identities=14% Similarity=0.164 Sum_probs=100.2
Q ss_pred cCCeEEEcCCeeeeeCCCcEEEEeeeeccC-CceeEEEe-cCceEE----------------------------------
Q psy16426 8 VPPMIWIQNQLVGAMEGDQMTLECHSEAYP-KSINYWTK-ENGEII---------------------------------- 51 (194)
Q Consensus 8 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p-~~~v~W~k-~~~~l~---------------------------------- 51 (194)
.||.+.+.|.+..+.+|++++|.|.+.+.+ .+.+.|++ ++..+.
T Consensus 1 r~~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 80 (291)
T 1qz1_A 1 RVLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCV 80 (291)
T ss_dssp -CCCEEEESSSEEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred CCcceEecCCCceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEE
Confidence 478899999999999999999999999976 68999999 432211
Q ss_pred ----------------EeeCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEE
Q psy16426 52 ----------------AQVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIH 115 (194)
Q Consensus 52 ----------------v~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (194)
|..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+ ............+
T Consensus 81 ~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~-~~~~~~~~~~~~~----- 154 (291)
T 1qz1_A 81 VTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDV-ILKKDVRFIVLSN----- 154 (291)
T ss_dssp EECTTSCEEEEEEEEEEECCSEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEETTSCS-STTCCTTEEECTT-----
T ss_pred EEcCCCCeeEEEEEEEeeccccccCCCCcccccCCCeEEEEEEeccCCCCEEEEEECCEEc-ccCCCceEEEccC-----
Confidence 334555555556667889999999999999999999999944333 2221111122222
Q ss_pred EEEEEeecCCCCCeEEEEEEEcCCCceE--EEEEEEcc
Q psy16426 116 MKLTIKAVTKQDFGAYKCVSKNSLGDTD--GSIKLYGK 151 (194)
Q Consensus 116 ~~L~i~~~~~~d~g~y~C~a~n~~g~~~--~~~~l~v~ 151 (194)
..|.|.++..+|.|.|+|.+.|..+... ..+.|.+.
T Consensus 155 ~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~ 192 (291)
T 1qz1_A 155 NYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVN 192 (291)
T ss_dssp SCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEE
T ss_pred CcEEEccCccccCeEEEEEEEecCCCceeeEEEEEEEe
Confidence 2799999999999999999998764432 34555544
No 56
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.71 E-value=1.9e-16 Score=126.32 Aligned_cols=142 Identities=27% Similarity=0.363 Sum_probs=106.4
Q ss_pred ccccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceEE---------------------------------
Q psy16426 5 GQNVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEII--------------------------------- 51 (194)
Q Consensus 5 ~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~--------------------------------- 51 (194)
.+..||.+...+.+..+.+|++++|.|.+.+.|.+.+.|++++..+.
T Consensus 117 ~v~~p~~~~~~~~~~~~~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 196 (403)
T 3laf_A 117 MVAGPLRFLSQTESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGDSRVVVLPSGALQISRLQPGDSGVYRCSA 196 (403)
T ss_dssp EECCCCEECSCCCCEEEETTSCEEECCCEECSSCCEEEEEESSSBCCCCTTCCSEEECTTSCEEECSCCGGGCEEEEEEE
T ss_pred EecCCCccccCCCcEEEEcCCeEEEEEEEcccCCCeEEEEECCEeccccCCceEEEEcCCceEEEcccccccCEEEEEEE
Confidence 35568888877888899999999999999999999999999876541
Q ss_pred ---------------EeeCC------eEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCC
Q psy16426 52 ---------------AQVPP------MIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDN 110 (194)
Q Consensus 52 ---------------v~~~p------~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~ 110 (194)
|...| .+...+....+.+|+.+.|.|.+.+.|.+.+.|++ ++.......... ....+
T Consensus 197 ~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~-~~~~~~~~~~~~-~~~~~ 274 (403)
T 3laf_A 197 RNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLR-GEEVIQLRSKKY-SLLGG 274 (403)
T ss_dssp ECSSCCCBCCCEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEE-TTEECCCSSSSE-EEETT
T ss_pred EcCCCceeccceeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEcCCCCCCeEEEEE-CCeeccCCCceE-EECCc
Confidence 22222 12223344556789999999999999999999999 554443322211 12222
Q ss_pred ceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEcccC
Q psy16426 111 AYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGKKK 153 (194)
Q Consensus 111 ~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~ 153 (194)
+.|.|.++..+|.|.|+|.+.|..|.....+.|.|..+
T Consensus 275 -----~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 312 (403)
T 3laf_A 275 -----SNLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVP 312 (403)
T ss_dssp -----TEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEE
T ss_pred -----cEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEECC
Confidence 37999999999999999999999998888887777654
No 57
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.70 E-value=4.9e-17 Score=129.28 Aligned_cols=119 Identities=23% Similarity=0.381 Sum_probs=96.1
Q ss_pred CeeeeeCCCcEEEEeeeeccCCceeEEEecCce-------------------EE--------------------------
Q psy16426 17 QLVGAMEGDQMTLECHSEAYPKSINYWTKENGE-------------------II-------------------------- 51 (194)
Q Consensus 17 ~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~-------------------l~-------------------------- 51 (194)
.+..+.+|++++|.|.+.|.|.+.+.|++++.. +.
T Consensus 220 ~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 299 (388)
T 2v5m_A 220 KPLELMVAHTISLLCPAQGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVE 299 (388)
T ss_dssp CCEEEETTSCEEECCCCEEESCCEEEEEEECTTSSCEEECCCSSSEEEETTEEEESSCCGGGCEEEEEEEECSSCEEEEE
T ss_pred CceEEeeCCcEEEEEECCCCCCCEEEEEecCCCCcccccccccCceecccCEEEECcCCHHHCeEEEEEEecCCCceeEE
Confidence 445688999999999999999999999997321 11
Q ss_pred ----EeeCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCC
Q psy16426 52 ----AQVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQD 127 (194)
Q Consensus 52 ----v~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 127 (194)
|..+|.+...+....+..|+.+.|.|.+.+.|.|.+.|++ ++..+... .+.|.|.++..+|
T Consensus 300 ~~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~-~g~~i~~~--------------~~~L~i~~v~~~d 364 (388)
T 2v5m_A 300 TVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMK-DGKAIGHS--------------ESVLRIESVKKED 364 (388)
T ss_dssp EEEEEEEEEEEEEESSEEEECTTSCEEEEEEEEEECCCEEEEEE-TTEECSCC--------------SSEEEESSCCGGG
T ss_pred EEEEEeCCCccccCCCcEEecCCCCEEEEEEeccccCCeEEEEE-CCEECccC--------------CCEEEEecCChhh
Confidence 4455655555666778899999999999999999999999 55543221 1389999999999
Q ss_pred CeEEEEEEEcCCCceEEEEEEEc
Q psy16426 128 FGAYKCVSKNSLGDTDGSIKLYG 150 (194)
Q Consensus 128 ~g~y~C~a~n~~g~~~~~~~l~v 150 (194)
.|.|+|.|.|..|...+.+.|.|
T Consensus 365 ~G~Y~C~a~N~~G~~~~~~~l~V 387 (388)
T 2v5m_A 365 KGMYQCFVRNDRESAEASAELKL 387 (388)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEE
T ss_pred CEEEEEEEEcCCCcEEEEEEEEe
Confidence 99999999999999998888865
No 58
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.70 E-value=8.5e-16 Score=111.66 Aligned_cols=128 Identities=16% Similarity=0.167 Sum_probs=86.7
Q ss_pred cccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceEE----------------------------------
Q psy16426 6 QNVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEII---------------------------------- 51 (194)
Q Consensus 6 v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~---------------------------------- 51 (194)
...+|.|...+. ..+.+|++++|.|.+.+.+. .+.|++++..+.
T Consensus 2 ~~~~P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 79 (198)
T 1ugn_A 2 HLPKPTLWAEPG-SVITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRIPQELVKKGQFPIPSITWEHTGRYRCYYGS 79 (198)
T ss_dssp CCCCCEEEEESC-SEEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTSCHHHHTTTEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCCCeEeccCC-CcccCCCcEEEEEEecCCCc-EEEEEECCccccccccccccCCcccEEEECCCCHHHCeEEEEEEEC
Confidence 457899998887 47899999999999998765 799999875541
Q ss_pred ---------------Eee---CCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCcee
Q psy16426 52 ---------------AQV---PPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYK 113 (194)
Q Consensus 52 ---------------v~~---~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~ 113 (194)
|.. +|.+...+ ...+.+|+.+.|.|.+.+. .+.+.|++++..+......+. ..... .
T Consensus 80 ~~~g~~~~s~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~~~~~~-~~~~~--~ 154 (198)
T 1ugn_A 80 DTAGRSESSDPLELVVTGAYIKPTLSAQP-SPVVNSGGNVTLQCDSQVA-FDGFILCKEGEDEHPQCLNSQ-PHARG--S 154 (198)
T ss_dssp TTTEECCCCCCEEEEEECSSCCCEEEEES-CSEEETTCCEEEEEECSSC-CSEEEEEEC------CEEEC---------C
T ss_pred CCCCcccCCccEEEEEcccccCCccccCC-ccccCCCCcEEEEEecCCC-CcEEEEEECCCccCCcccccc-ccCCC--c
Confidence 111 12222221 2456789999999999887 788999994433322111110 01111 1
Q ss_pred EEEEEEEeecCCCCCeEEEEEEEcCCC
Q psy16426 114 IHMKLTIKAVTKQDFGAYKCVSKNSLG 140 (194)
Q Consensus 114 ~~~~L~i~~~~~~d~g~y~C~a~n~~g 140 (194)
....|.|.++..+|.|.|+|.|.|..+
T Consensus 155 ~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 181 (198)
T 1ugn_A 155 SRAIFSVGPVSPSRRWWYRCYAYDSNS 181 (198)
T ss_dssp CEEEEEECCCCTTSCEEEEEEEECTTS
T ss_pred ceeEEEecccCcccCeEEEEEEEeCCC
Confidence 146899999999999999999999865
No 59
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.70 E-value=1.6e-16 Score=128.87 Aligned_cols=142 Identities=18% Similarity=0.170 Sum_probs=95.2
Q ss_pred cccCCeEEEcCCeeeeeCCCcEEEEeeeec-cCCceeEEEecCceE----------------------E-----------
Q psy16426 6 QNVPPMIWIQNQLVGAMEGDQMTLECHSEA-YPKSINYWTKENGEI----------------------I----------- 51 (194)
Q Consensus 6 v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g-~p~~~v~W~k~~~~l----------------------~----------- 51 (194)
|..+|.+ .+.+..+.+|++++|.|.+.| .|.+.|.|++++..+ +
T Consensus 226 V~~~p~~--~~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 303 (423)
T 3qs7_E 226 LNQTPQT--TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTG 303 (423)
T ss_dssp SSSCCCS--STTEEEEETTSCEEEEEEEEESSSCCCEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCE
T ss_pred EecCCcc--CCCceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEccccceeecccccCCceeEEEEEEEEeecCHHHCE
Confidence 3444443 445678899999999999998 677999999986531 1
Q ss_pred -----------------EeeCCeEEecc--ceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCce
Q psy16426 52 -----------------AQVPPMIWIQN--QLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAY 112 (194)
Q Consensus 52 -----------------v~~~p~i~~~~--~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~ 112 (194)
|..+|.+...+ ....+.+|+.+.|.|.+.+.|.|.+.|++ ++..+...... ....+
T Consensus 304 ~Y~C~A~N~~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k-~g~~l~~~~~~----~~~~~ 378 (423)
T 3qs7_E 304 YYTCSSSKHPSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTF-SRKSFPCEQKG----LDNGY 378 (423)
T ss_dssp EEEEEETTEEEEEEEEEEESSCEEEEC---CEECCCTTCCCCEEEEEEEESCCEEEEEE-TTEEEECBCCB----CSSSS
T ss_pred EEEEEEecCCCceEEEEEEeCCcceEcCCCccEEecCCCeEEEEEEEEEcCCCeEEEEE-CCEECCCcccc----ccCCc
Confidence 34455554433 34556789999999999999999999999 55554433210 00111
Q ss_pred eEEEEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEcccCCCCCh
Q psy16426 113 KIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGKKKKKKKK 158 (194)
Q Consensus 113 ~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~p~~p~ 158 (194)
.+.+.....+|.|.|+|.|.|..|....++.|.|...|..|.
T Consensus 379 ----~~~~~~~~~~D~G~YtC~A~N~~G~~~~s~~L~v~~~p~~~~ 420 (423)
T 3qs7_E 379 ----SISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRSGTKHHH 420 (423)
T ss_dssp ----EEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC---------
T ss_pred ----EEEEEecccccCEEEEEEEEcCCceEEEEEEEEEecCCcccc
Confidence 222345567899999999999999999999999988887764
No 60
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.70 E-value=5.3e-16 Score=118.64 Aligned_cols=151 Identities=17% Similarity=0.203 Sum_probs=103.4
Q ss_pred cccccCCe-EEEcCCeeeeeCCCcEEEEeeeeccCC-ceeEEEecCceEE------------------------------
Q psy16426 4 QGQNVPPM-IWIQNQLVGAMEGDQMTLECHSEAYPK-SINYWTKENGEII------------------------------ 51 (194)
Q Consensus 4 ~~v~~~P~-~~~~~~~~~v~~G~~v~L~C~~~g~p~-~~v~W~k~~~~l~------------------------------ 51 (194)
+.|..+|. +...+.+..+.+|++++|.|.+.+... +.+.|+++++..+
T Consensus 83 l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 162 (292)
T 4dkd_C 83 LYVKDPARPWNVLAQEVVVFEDQDALLPCLLTDPVLEAGVSLVRVRGRPLMRHTNYSFSPWHGFTIHRAKFIQSQDYQCS 162 (292)
T ss_dssp CEECCSSCCEEESCSEEEEETTSCEECCEEESSGGGGSSEEEEEGGGCCCCSSCCEECCSSSCCEETTCCGGGCSEEEEE
T ss_pred EEEcCccccccccCCeEEEcCCCcEEEeeeCCCCCcceeEEEEecCCCccccCCcccccCCceEEECCCCHHHCeEEEEE
Confidence 33555555 455677888999999999999998332 7899999743321
Q ss_pred ----------------Eee----CCeEEeccceeEEeeCCeEEEEEEeeccCCC-ccEEEecCcEEeeCCCceeEEecCC
Q psy16426 52 ----------------AQV----PPMIWIQNQLVGAMEGDQMTLECHSEAYPKS-INYWTKENGEIIAQGSKYEPILLDN 110 (194)
Q Consensus 52 ----------------v~~----~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p-~v~W~~~~~~~~~~~~~~~~~~~~~ 110 (194)
|.. +|.+...+....+..|+.+.|.|.+.+.+++ .+.|+. ++......... .....
T Consensus 163 a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~~w~~-~~~~~~~~~~~--~~~~~ 239 (292)
T 4dkd_C 163 ALMGGRKVMSISIRLKVQKVIPGPPALTLVPAELVRIRGEAAQIVCSASSVDVNFDVFLQH-NNTKLAIPQQS--DFHNN 239 (292)
T ss_dssp ECSTTSCEECCCEEEEEECCCCSSCEEEEESSCBCCCSSSCEEEEEEEEESSSCCEEECCB-SSCCCCCCBEE--EEETT
T ss_pred EEeCCCceeEEEEEEEEeCCCCCCCeEEccCCceeEecCCCEEEEEEecCCCCceEEEEeC-CCcccccCccc--eeccc
Confidence 333 6666666655556789999999999987754 355666 44333222211 22233
Q ss_pred ceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEcccCCCCC
Q psy16426 111 AYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGKKKKKKK 157 (194)
Q Consensus 111 ~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~p~~p 157 (194)
.+...+.|.|.++..+|.|.|+|.|.|..|....++.|.|......+
T Consensus 240 ~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~~~~~ 286 (292)
T 4dkd_C 240 RYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFRVVESAGNS 286 (292)
T ss_dssp EEEEEEEEEESSCCTTSCEEEEEEEECSSCEEEEEEEECC-------
T ss_pred eeeeEEEEEECccChhcCeEEEEEEecCCCCceeEEEEEEeeCCCcc
Confidence 34455799999999999999999999999999999999887765544
No 61
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.70 E-value=3.6e-16 Score=113.48 Aligned_cols=127 Identities=17% Similarity=0.172 Sum_probs=89.4
Q ss_pred cccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceEE----------------------------------
Q psy16426 6 QNVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEII---------------------------------- 51 (194)
Q Consensus 6 v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~---------------------------------- 51 (194)
...+|.|...+.. .+.+|++++|.|.+.+ +.+.+.|++++..+.
T Consensus 2 ~~~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 79 (196)
T 3p2t_A 2 PLPKPTLWAEPGS-VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDRQNPLEPKNKARFSIPSMTEDYAGRYRCYYRS 79 (196)
T ss_dssp CBCCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEEECCCSSSSEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCCCEEEccCCC-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCcccccccccCCceEEEEeccCCcccCceEEEEEeC
Confidence 4568999988887 8899999999999998 678999999875431
Q ss_pred --------------Ee---eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeE
Q psy16426 52 --------------AQ---VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKI 114 (194)
Q Consensus 52 --------------v~---~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (194)
|. .+|.+...+. ..+.+|+.+.|.|.+.+. ++.+.|+++ +.............. ...
T Consensus 80 ~~g~~~~s~~~~l~V~~~~~~p~~~~~~~-~~v~~G~~v~L~C~~~~~-~~~~~w~k~-g~~~~~~~~~~~~~~---~~~ 153 (196)
T 3p2t_A 80 PVGWSQPSDPLELVMTGAYSKPTLSALPS-PLVTSGKSVTLLCQSRSP-MDTFLLCKE-RAAHPLLCLRSEHGA---QQH 153 (196)
T ss_dssp TTEEBCCCCCEEEEEECSSCCCEEEEESC-SEECTTCCEEEEEEEEEE-EEEEEEEET-TCCCGGGSEEEEEEE---EEE
T ss_pred CCcccCCCccEEEEecCCCCCCEEEeCCc-ceecCCCeEEEEEecCCC-CCEEEEEeC-CCcccceeecccccc---cCc
Confidence 11 1233333332 246789999999999874 467889994 433222111110000 122
Q ss_pred EEEEEEeecCCCCCeEEEEEEEcCCC
Q psy16426 115 HMKLTIKAVTKQDFGAYKCVSKNSLG 140 (194)
Q Consensus 115 ~~~L~i~~~~~~d~g~y~C~a~n~~g 140 (194)
...|.|.+++.+|.|.|+|.|.|..+
T Consensus 154 ~~~L~i~~v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 154 QAEFPMSPVTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECGGG
T ss_pred ceEEEeCCCcccCCCeEEEEEEcCCC
Confidence 46899999999999999999999876
No 62
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.69 E-value=2.2e-16 Score=122.97 Aligned_cols=143 Identities=20% Similarity=0.362 Sum_probs=101.7
Q ss_pred cccccCCeEEE--cCCeeeeeCC---CcEEEEee-eeccCCceeEEEecCceEE--------------------------
Q psy16426 4 QGQNVPPMIWI--QNQLVGAMEG---DQMTLECH-SEAYPKSINYWTKENGEII-------------------------- 51 (194)
Q Consensus 4 ~~v~~~P~~~~--~~~~~~v~~G---~~v~L~C~-~~g~p~~~v~W~k~~~~l~-------------------------- 51 (194)
+.|..+|.+.. .+....+.+| +.++|.|. +.+.|.+.+.|++++....
T Consensus 125 l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 204 (331)
T 3u83_A 125 LTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVPSREA 204 (331)
T ss_dssp EEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEESSCCEEEEEEEECTTSCEEEEEEEEECCCGGG
T ss_pred EEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCCceEEEEcCCCCccccceeECCCCcEEEEEEEEEEecccc
Confidence 44667777744 4456678888 77999998 8889999999998421110
Q ss_pred -----------------------EeeCCeEEecc-ceeEEeeCCeEEEEEEeeccCCCc-cEEEecCcEEeeCCCceeEE
Q psy16426 52 -----------------------AQVPPMIWIQN-QLVGAMEGDQMTLECHSEAYPKSI-NYWTKENGEIIAQGSKYEPI 106 (194)
Q Consensus 52 -----------------------v~~~p~i~~~~-~~~~~~~g~~~~l~C~~~~~p~p~-v~W~~~~~~~~~~~~~~~~~ 106 (194)
|.++|.+.... ....+.+|+.+.|.|.+.+.|.|. +.|++++. .+.... .
T Consensus 205 d~G~Y~C~a~n~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~-~~~~~~----~ 279 (331)
T 3u83_A 205 HQQSLACIVNYHMDRFKESLTLNVQYEPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNG-SLPKGV----E 279 (331)
T ss_dssp TTCEEEEEEEETTEEEEEEEECCEEEEEEEEEECCCSCCBTTCCCEEEEEEEEEESCCCEEEEEETTB-SCCTTE----E
T ss_pred CCCEEEEEEecCCCcceeeEEEEEecCCeEEEecCCCceEeCCCeEEEEEeCcCCCCCCEEEEEECCC-cccccc----e
Confidence 44455544322 333366799999999999999998 99999443 333221 1
Q ss_pred ecCCceeEEEEEEEe-ecCCCCCeEEEEEEEcCCCceEEEEEEEcccCCCCC
Q psy16426 107 LLDNAYKIHMKLTIK-AVTKQDFGAYKCVSKNSLGDTDGSIKLYGKKKKKKK 157 (194)
Q Consensus 107 ~~~~~~~~~~~L~i~-~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~p~~p 157 (194)
.. ..+|.|. ++..+|.|.|+|.|.|..|.....+.|.|...+...
T Consensus 280 ~~------~~~L~i~~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~~ 325 (331)
T 3u83_A 280 AQ------NRTLFFKGPINYSLAGTYICEATNPIGTRSGQVEVNITEAAALE 325 (331)
T ss_dssp EE------TTEEEECSCCCGGGCEEEEEEEEETTEEEEEEEEECCBC-----
T ss_pred ec------CcEEEEeCCCccccCeEEEEEEEeccccceEEEEEEEeccchhh
Confidence 11 2389999 899999999999999999999999999988775543
No 63
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.69 E-value=3.5e-16 Score=114.53 Aligned_cols=142 Identities=15% Similarity=0.113 Sum_probs=90.6
Q ss_pred EEEcCCeee-eeCCCcEEEEeeeeccCCceeEEEecC-----ceE---------E-------------------------
Q psy16426 12 IWIQNQLVG-AMEGDQMTLECHSEAYPKSINYWTKEN-----GEI---------I------------------------- 51 (194)
Q Consensus 12 ~~~~~~~~~-v~~G~~v~L~C~~~g~p~~~v~W~k~~-----~~l---------~------------------------- 51 (194)
+.+.+.+.. +.+|++++|.|.+.|.|.+.+.|++.. +.. .
T Consensus 3 v~i~p~~~~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~ 82 (202)
T 1vca_A 3 IETTPESRYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLNGKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEK 82 (202)
T ss_dssp EEEESSSEEEEETTSCEEEEEEEESCSSCEEEEEETTCCCCSSEEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEE
T ss_pred EEECCCCcEEEcCCCcEEEEEeecCCCCCeEEEECCCCCCccceEEEcCCccEEEECcCCHHHCEEEEEEEEECCceEee
Confidence 445565544 459999999999999999999999832 111 1
Q ss_pred -----EeeCCe-EEeccceeEEeeCCeEEEEEEeeccCC---CccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEee
Q psy16426 52 -----AQVPPM-IWIQNQLVGAMEGDQMTLECHSEAYPK---SINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKA 122 (194)
Q Consensus 52 -----v~~~p~-i~~~~~~~~~~~g~~~~l~C~~~~~p~---p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~ 122 (194)
|..+|. +.+... ..+.+|+.+.|.|.+.+.++ +.+.|++ ++..+..................+.|.|..
T Consensus 83 ~~~l~V~~~p~~~~~~~~-~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k-~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~ 160 (202)
T 1vca_A 83 GIQVEIYSFPKDPEIHLS-GPLEAGKPITVKCSVADVYPFDRLEIDLLK-GDHLMKSQEFLEDADRKSLETKSLEVTFTP 160 (202)
T ss_dssp EEEEEEEBCCSCCEEEES-SCEETTSCEEEEEEEEEEBSGGGEEEEEEE-TTEEEEEEECCSCCSSCCCEEEEEEEEECC
T ss_pred EEEEEEEeCCCCCEeCCc-eEEcCCCCEEEEEEECCcCCCCCeEEEEEe-CCeECcccccccccCcCcceEEEEEEEEEe
Confidence 333332 222222 44678999999999988643 3678999 444432211000000001123345678888
Q ss_pred cCCCCCeEEEEEEEcCCCc-------eEEEEEEEcccCCC
Q psy16426 123 VTKQDFGAYKCVSKNSLGD-------TDGSIKLYGKKKKK 155 (194)
Q Consensus 123 ~~~~d~g~y~C~a~n~~g~-------~~~~~~l~v~~~p~ 155 (194)
...+|.|+|+|.|.|..+. ...++.|.|..+|.
T Consensus 161 ~~~d~~g~ytC~A~n~~~~~~~~~~~~~~~~~L~V~y~P~ 200 (202)
T 1vca_A 161 VIEDIGKVLVCRAKLHIDEMDSVPTVRQAVKELQVYISPK 200 (202)
T ss_dssp CGGGTTCEEEEEEEECSCCCTTSCSEEEEEEECCEECCC-
T ss_pred eeccCCCeEEEEEEccccCCCCcceeEeeEEEEEEecCCC
Confidence 8888899999999998876 34567787776654
No 64
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.69 E-value=1.9e-16 Score=104.69 Aligned_cols=96 Identities=20% Similarity=0.326 Sum_probs=77.5
Q ss_pred eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEE
Q psy16426 54 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKC 133 (194)
Q Consensus 54 ~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C 133 (194)
.||.|...+..+.+.+|+.+.|.|.+.|.|.|.+.|++ ++..+....++.....+. ..+|.|.++..+|.|.|+|
T Consensus 12 ~pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k-~g~~l~~~~~~~~~~~~~----~~~L~I~~v~~~D~G~Y~C 86 (107)
T 3knb_B 12 SPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEK-GGQQLAASERLSFPADGA----EHGLLLTAALPTDAGVYVC 86 (107)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEE-TTEECCCCSSEECCEETT----EEEEEESSCCGGGCEEEEE
T ss_pred CCCEEEeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEE-CcccccceeeEEEeecCc----eEEEEEecCChhhCEEEEE
Confidence 36777777788889999999999999999999999999 666665555554222222 4589999999999999999
Q ss_pred EEEcCCCceEEEEEEEcccCC
Q psy16426 134 VSKNSLGDTDGSIKLYGKKKK 154 (194)
Q Consensus 134 ~a~n~~g~~~~~~~l~v~~~p 154 (194)
.|.|..|...+.+.|.|..+|
T Consensus 87 ~a~N~~G~~~~~~~l~V~~pP 107 (107)
T 3knb_B 87 RARNAAGEAYAAAAVTVLEPP 107 (107)
T ss_dssp EEEETTEEEEEEEEEEEEC--
T ss_pred EEEECCCEEEEEEEEEEEcCC
Confidence 999999999999999887654
No 65
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.69 E-value=5.8e-16 Score=111.13 Aligned_cols=124 Identities=19% Similarity=0.228 Sum_probs=93.7
Q ss_pred CeeeeeCCCcEEEEeeeeccCCceeEEEecCce----------------------------------EE-----------
Q psy16426 17 QLVGAMEGDQMTLECHSEAYPKSINYWTKENGE----------------------------------II----------- 51 (194)
Q Consensus 17 ~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~----------------------------------l~----------- 51 (194)
..+.+.+|++++|.|.+.+.|.+.+.|++++.. +.
T Consensus 3 ~~v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~ 82 (184)
T 2ny1_B 3 KVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDT 82 (184)
T ss_dssp CEEEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEE
T ss_pred CcEEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEE
Confidence 346789999999999999989999999998642 11
Q ss_pred --EeeCC----------eEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEE
Q psy16426 52 --AQVPP----------MIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLT 119 (194)
Q Consensus 52 --v~~~p----------~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 119 (194)
..... .+. .+....+.+|+.+.|.|.+.+.|.|.+.|+++++.... ....|.
T Consensus 83 Y~C~~~~~~~~~~l~V~~~~-~~~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~~~---------------~~~~L~ 146 (184)
T 2ny1_B 83 YICEVEDQKEEVQLLVFGLT-ANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQ---------------GGKTLS 146 (184)
T ss_dssp EEEEETTEEEEEEEEEEEEE-ESSCSEEETTCCEEEEEECCTTCCCEEEEECTTSCEEE---------------ESSEEE
T ss_pred EEEEEEcCCCcEEEEEEEec-CCCCceeecCCCEEEEEEcCCCCCCEEEEEeCCCcccc---------------CceEEE
Confidence 00000 011 12334567899999999999999999999985443311 123899
Q ss_pred EeecCCCCCeEEEEEEEcCCCceEEEEEEEcccCCCC
Q psy16426 120 IKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGKKKKKK 156 (194)
Q Consensus 120 i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~p~~ 156 (194)
|.++..+|.|.|+|.|.|..+.....+.|.|...|..
T Consensus 147 i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~p~~ 183 (184)
T 2ny1_B 147 VSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKA 183 (184)
T ss_dssp ESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCC-
T ss_pred EecCCcCCCeEEEEEEEECCceEEEEEEEEEEecCCC
Confidence 9999999999999999999998888999988877654
No 66
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.69 E-value=2.5e-16 Score=131.01 Aligned_cols=139 Identities=15% Similarity=0.118 Sum_probs=102.2
Q ss_pred ccccCCeEEEcCCeeeeeCCCcEEEEeeee-ccCCceeEEEecCceE-----------------------E---------
Q psy16426 5 GQNVPPMIWIQNQLVGAMEGDQMTLECHSE-AYPKSINYWTKENGEI-----------------------I--------- 51 (194)
Q Consensus 5 ~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~-g~p~~~v~W~k~~~~l-----------------------~--------- 51 (194)
.|..+|.+ .+.+..+.+|+++.|.|.+. +.|.+.|+|++++..+ .
T Consensus 225 ~V~~~p~~--~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~Ds 302 (527)
T 3qs9_E 225 DLNQTPQT--TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDT 302 (527)
T ss_dssp ESSSCCCC--SCCEEEECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGC
T ss_pred EEeccCcc--CCCceEEeCCCeEEEEEEEccCCCCeEEEEEECCEECCCCceeeeeeeccCcceeeEEEEEEccCCcccC
Confidence 34455555 56678899999999999996 8999999999987531 1
Q ss_pred ------------------EeeCCeEEecc--ceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCc
Q psy16426 52 ------------------AQVPPMIWIQN--QLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNA 111 (194)
Q Consensus 52 ------------------v~~~p~i~~~~--~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~ 111 (194)
|..+|.+...+ ....+.+|+.+.|.|.+.+.|.|.+.|++ ++..+....... .+
T Consensus 303 G~Y~C~a~N~~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~k-~g~~l~~~~~~~---~~-- 376 (527)
T 3qs9_E 303 GYYTCSSSKHPSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTF-SRKSFPCEQKGL---DN-- 376 (527)
T ss_dssp EEEEEEETTEEEEEEEEEEC--CEEECCCSCCEECCCTTCCCCEEEEEEEESCCEEEEEE-TTEEEECBCCBC---SS--
T ss_pred eEEEEEEEeCCCceEEEEEEccCccccccCcccEEEcCCCeEEEEEEEEecCCCEEEEEE-CCEECcCCcccc---cC--
Confidence 23344444332 23456779999999999999999999999 555554332211 12
Q ss_pred eeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEcccCC
Q psy16426 112 YKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGKKKK 154 (194)
Q Consensus 112 ~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~p 154 (194)
..+|.|.++..+|.|.|+|.|.|..|.....+.|.|..+|
T Consensus 377 ---~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~~~P 416 (527)
T 3qs9_E 377 ---GYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRRKP 416 (527)
T ss_dssp ---SSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC--CCC
T ss_pred ---CcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEecCC
Confidence 2378999999999999999999999999888888887554
No 67
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.69 E-value=8.1e-16 Score=112.10 Aligned_cols=134 Identities=22% Similarity=0.313 Sum_probs=93.9
Q ss_pred EEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCc---------------------------------eEE--------
Q psy16426 13 WIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENG---------------------------------EII-------- 51 (194)
Q Consensus 13 ~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~---------------------------------~l~-------- 51 (194)
.+.+.+..+.+|++++|.|...+.+.+.+.|++++. .+.
T Consensus 3 ~i~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D 82 (208)
T 3r4d_A 3 TIEAVPPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITMKD 82 (208)
T ss_dssp EEEEESSEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCEEECSCCGGG
T ss_pred cccCccceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCeEEEccccccC
Confidence 344555788999999999998888889999998631 111
Q ss_pred -----------------------EeeC---CeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeE
Q psy16426 52 -----------------------AQVP---PMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEP 105 (194)
Q Consensus 52 -----------------------v~~~---p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~ 105 (194)
|..+ |.+...... +..|+.+.|.|.+.+.| |.+.|++ ++..+....++.
T Consensus 83 ~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~--~~~g~~v~l~C~~~~~p-p~i~W~~-~g~~l~~~~~~~- 157 (208)
T 3r4d_A 83 MGVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTT--VKELDSVTLTCLSNDIG-ANIQWLF-NSQSLQLTERMT- 157 (208)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEEEECCCCCCEEEESCSS--CCTTCCEEEEEECSCTT-CEEEEEE-TTEECCCCSSEE-
T ss_pred CeEEEEEEEcccCceeEEEEEEEeccCCCCCEEecCCce--EeeCCCEEEEEECCCCC-CceEEEE-CCEeCCCCCCeE-
Confidence 2212 333332222 66799999999999865 7899999 666555444443
Q ss_pred EecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEE-EEEEEcccCCCC
Q psy16426 106 ILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDG-SIKLYGKKKKKK 156 (194)
Q Consensus 106 ~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~-~~~l~v~~~p~~ 156 (194)
...++ .+|.|.++..+|.|.|+|.|.|..|...+ .+.|.|..+|..
T Consensus 158 ~~~~~-----~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~~~~~~ 204 (208)
T 3r4d_A 158 LSQNN-----SILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDIIFDPHH 204 (208)
T ss_dssp EETTT-----TEEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC-----
T ss_pred EcCCC-----CEEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEEeCCcc
Confidence 22222 38999999999999999999999998775 588887766543
No 68
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.69 E-value=9e-16 Score=133.07 Aligned_cols=150 Identities=23% Similarity=0.287 Sum_probs=114.9
Q ss_pred cccccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceEE--------------------------------
Q psy16426 4 QGQNVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEII-------------------------------- 51 (194)
Q Consensus 4 ~~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~-------------------------------- 51 (194)
+.|..||.+...+....+.+|++++|.|.+.+.|.+.+.|++++..+.
T Consensus 338 l~V~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~ 417 (816)
T 3dmk_A 338 LTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSESVLRIESVKKEDKGMYQCFVRNDRESAEA 417 (816)
T ss_dssp EEECEEEEEEEESSEEECCTTSCEEEEEEEEEECCCEEEEEETTEECSCCSSEEEESSCCGGGCEEEEEEEECSSCEEEE
T ss_pred EEEcCCCceeeCCCceEecCCCCEEEEEEEeccCCCEEEEEECCEECCCCCCEEEEcCCCHHHCEEEEEEEECCCCcEEE
Confidence 345567888888888899999999999999999999999999875532
Q ss_pred -----E---eeCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEE-ecCCceeEEEEEEEee
Q psy16426 52 -----A---QVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPI-LLDNAYKIHMKLTIKA 122 (194)
Q Consensus 52 -----v---~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~-~~~~~~~~~~~L~i~~ 122 (194)
| ..+|.+........+.+|+.+.|.|.+.+.|.|.+.|++ ++..+.....+... .........+.|.|.+
T Consensus 418 ~~~l~v~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~-~g~~l~~~~~~~~~~~~~~~~~~~~~L~i~~ 496 (816)
T 3dmk_A 418 SAELKLGGRFDPPVIRQAFQEETMEPGPSVFLKCVAGGNPTPEISWEL-DGKKIANNDRYQVGQYVTVNGDVVSYLNITS 496 (816)
T ss_dssp CCEEECCCSSCCCEEEEECCCEEECSSSCEEEEEEEECSSCCEEEEEE-TTEECCSCTTEEEEEEECTTSCEEEEEEESS
T ss_pred EEEEEEccccCCCceEecCcceEEcCCCCEEEEEEEecCCCCEEEEEE-CCEECCCCCCcccccEEecCCCcEEEEEEee
Confidence 1 235566555555667889999999999999999999999 55555444443221 1111112346899999
Q ss_pred cCCCCCeEEEEEEEcCCCceEEEEEEEcccCC
Q psy16426 123 VTKQDFGAYKCVSKNSLGDTDGSIKLYGKKKK 154 (194)
Q Consensus 123 ~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~p 154 (194)
+..+|.|.|+|.+.|..|.....+.|.|...|
T Consensus 497 v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 528 (816)
T 3dmk_A 497 VHANDGGLYKCIAKSKVGVAEHSAKLNVYGLP 528 (816)
T ss_dssp CCTTTCEEEEEEEEETTEEEEEEEEEEECSSC
T ss_pred ccccCCEEEEEEEEECCCeEEEEEEEEEecCC
Confidence 99999999999999999998888888887655
No 69
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.69 E-value=5.6e-16 Score=121.15 Aligned_cols=142 Identities=18% Similarity=0.237 Sum_probs=99.7
Q ss_pred ccCCeEEEcCCeeeeeCCCcEEEEeeeeccC-CceeEEEecCceEE-----------------------------Ee---
Q psy16426 7 NVPPMIWIQNQLVGAMEGDQMTLECHSEAYP-KSINYWTKENGEII-----------------------------AQ--- 53 (194)
Q Consensus 7 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p-~~~v~W~k~~~~l~-----------------------------v~--- 53 (194)
..||.+........+.+|+++.|.|.+.|.| .+.+.|++++..+. +.
T Consensus 126 ~~~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 205 (329)
T 3oq3_B 126 RKPPSCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQSGQNLIIHNPELEDSGRYDCYVHYDD 205 (329)
T ss_dssp CCCCSCEEEEEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEEETTEEEECSCCGGGCEEEEEEEEECC
T ss_pred cCCCcEeccccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEecCCCEEEEeecChhhCEEEEEEEEecc
Confidence 3456655444445567899999999999999 89999999876542 11
Q ss_pred ------------------eCC----eEEeccceeEEeeCCeEEEEEEeeccC---CC-ccEEEecCcEEeeCCCceeEE-
Q psy16426 54 ------------------VPP----MIWIQNQLVGAMEGDQMTLECHSEAYP---KS-INYWTKENGEIIAQGSKYEPI- 106 (194)
Q Consensus 54 ------------------~~p----~i~~~~~~~~~~~g~~~~l~C~~~~~p---~p-~v~W~~~~~~~~~~~~~~~~~- 106 (194)
.+| .+. .+....+..|+.+.|.|.+.+.| .+ .+.|++++..+..........
T Consensus 206 ~~g~~~~~~s~~~~l~V~~~~~~~~~~~-~~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i~~~~~~~~~~~ 284 (329)
T 3oq3_B 206 VRIKNDIVVSRCKILTVIPSQDHRFKLI-LDPKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGLDFGVYSIL 284 (329)
T ss_dssp TTSSSCEEEEEEEEEEEECCCCCCEEEE-CCSEEEECTTSCEEEEEEEEETTCCTTCCEEEEECTTSCBCCBCSSEEEEE
T ss_pred cCCCceeEEEeeEEEEEECCCCCCCcee-cCCeeEEecCCCEEEEEEEEECCCCCCCcEEEEEECCeeeeccCCceeeee
Confidence 111 111 23345567899999999999987 66 779999544433333222111
Q ss_pred ecCCceeEEEEEEEeecCCCCCe-EEEEEEEcCCCceEEEEEEEc
Q psy16426 107 LLDNAYKIHMKLTIKAVTKQDFG-AYKCVSKNSLGDTDGSIKLYG 150 (194)
Q Consensus 107 ~~~~~~~~~~~L~i~~~~~~d~g-~y~C~a~n~~g~~~~~~~l~v 150 (194)
..... ...+.|.|.++..+|.| .|+|.|.|..|.....+.|.|
T Consensus 285 ~~~~~-~~~~~L~I~~v~~~D~G~~Y~C~a~N~~G~~~~~~~l~v 328 (329)
T 3oq3_B 285 TSSGG-ITEATLYFENVTEEYIGNTYTCRGHNYYFDKTLTTTVVL 328 (329)
T ss_dssp EEETT-EEEEEEEESSCCGGGTTCEEEEEEECSSCEEEEEEEEEE
T ss_pred cccCc-eeEeEEEEEeccHHHCCCcEEEEEEecCCceEEEEEEEe
Confidence 11111 24679999999999999 999999999999988877765
No 70
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.68 E-value=9.1e-16 Score=118.28 Aligned_cols=134 Identities=20% Similarity=0.218 Sum_probs=98.6
Q ss_pred CCeEEEcCC-eeeeeCCCcEEEEeeee-ccCCceeEEEecCceEE----------------------------------E
Q psy16426 9 PPMIWIQNQ-LVGAMEGDQMTLECHSE-AYPKSINYWTKENGEII----------------------------------A 52 (194)
Q Consensus 9 ~P~~~~~~~-~~~v~~G~~v~L~C~~~-g~p~~~v~W~k~~~~l~----------------------------------v 52 (194)
+|.+...+. ...+.+|++++|.|.+. +.|.+.+.|++++..+. +
T Consensus 106 ~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 185 (312)
T 2y23_A 106 FPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQL 185 (312)
T ss_dssp SCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTTTEEEEEESCCCGGGCEEEEEEE
T ss_pred CCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCCCEEEEEEccCCcccCEeEEEEE
Confidence 555555443 77889999999999999 88999999999875532 0
Q ss_pred e----------------------------------eCCeEEeccceeEEeeCCeEEEEEEeeccCCC-ccEEEecCcEEe
Q psy16426 53 Q----------------------------------VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKS-INYWTKENGEII 97 (194)
Q Consensus 53 ~----------------------------------~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p-~v~W~~~~~~~~ 97 (194)
. .+|.+... ....+.+|+.+.|.|.+.+.|.| .+.|++ ++..+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~-~g~~~ 263 (312)
T 2y23_A 186 QDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEY-LSWEVTGECNVLLKCKVANIKKETHIVWYK-DEREI 263 (312)
T ss_dssp ESSSCEEEEEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEE-EEEEEETTTEEEEEEEEESCCSSCEEEEEE-TTEEE
T ss_pred EeCCceEEEEEEEcchhhhhhcccccccccchhhccCCceeec-ceEEEeCCCEEEEEEEEcCCCCCCEEEEee-CCEEC
Confidence 0 01222211 12457789999999999999888 899999 55554
Q ss_pred eCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEc
Q psy16426 98 AQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYG 150 (194)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v 150 (194)
....++.. .+ ..+.|.|.++..+|.|.|+|.|.|..|...+.+.|.+
T Consensus 264 ~~~~~~~~--~~----~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~i 310 (312)
T 2y23_A 264 SVDEKHDF--KD----GICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVD 310 (312)
T ss_dssp EEECCC----------CEEEEEECSCSGGGCEEEEEEEESTTCCEEEEEEECS
T ss_pred CCCCcEEE--EC----CEEEEEECcCCHHHCEEEEEEEEcCCCceeeeeEEEe
Confidence 43333321 11 1469999999999999999999999999999888865
No 71
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.68 E-value=1.2e-16 Score=116.59 Aligned_cols=134 Identities=16% Similarity=0.170 Sum_probs=92.3
Q ss_pred EEcCCeeeeeCCCcEEEEeeeeccC----CceeEEEecC----------------c------------------------
Q psy16426 13 WIQNQLVGAMEGDQMTLECHSEAYP----KSINYWTKEN----------------G------------------------ 48 (194)
Q Consensus 13 ~~~~~~~~v~~G~~v~L~C~~~g~p----~~~v~W~k~~----------------~------------------------ 48 (194)
...+..+.+.+|++++|.|.+.+.+ .+.+.|++++ .
T Consensus 4 ~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 83 (214)
T 3jz7_A 4 TTPEQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGD 83 (214)
T ss_dssp --CEEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTB
T ss_pred ecCCceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCc
Confidence 3445667899999999999999876 4699999832 0
Q ss_pred -eEE------------------------------EeeCCeEEeccceeEEeeCCeEEEEEEe-eccCCCccEEEecCcEE
Q psy16426 49 -EII------------------------------AQVPPMIWIQNQLVGAMEGDQMTLECHS-EAYPKSINYWTKENGEI 96 (194)
Q Consensus 49 -~l~------------------------------v~~~p~i~~~~~~~~~~~g~~~~l~C~~-~~~p~p~v~W~~~~~~~ 96 (194)
.|. |..+|.+........+..|+.+.|.|.+ .+.|.|.+.|+++++..
T Consensus 84 ~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~~~ 163 (214)
T 3jz7_A 84 ASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQ 163 (214)
T ss_dssp CCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBSCEEEEESCCBTTCCEEEEEECSBCCSSCEEEEEECSTTC
T ss_pred ccEEEccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCCceeeeecceecCCcEEEEecCCCCCCCCEEEEEECCCCC
Confidence 011 2333322212222235679999999999 88999999999843322
Q ss_pred eeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEcccC
Q psy16426 97 IAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGKKK 153 (194)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~ 153 (194)
....... .... ...|.|.++..+|.|.|+|.|.|..|...+.+.|.|.++
T Consensus 164 ~~~~~~~--~~~~-----~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P 213 (214)
T 3jz7_A 164 TMPTPWL--AEMT-----SPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVVPP 213 (214)
T ss_dssp CCCGGGG--GGTT-----SSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCBCC
T ss_pred ccCccce--eccC-----CCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEeCC
Confidence 1111110 0111 238999999999999999999999999999999988743
No 72
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.68 E-value=8.7e-16 Score=117.46 Aligned_cols=137 Identities=18% Similarity=0.218 Sum_probs=96.5
Q ss_pred eeeeCCCcEEEEeeeeccCCceeEEEecCce--EE-------------------------------------Ee--eCCe
Q psy16426 19 VGAMEGDQMTLECHSEAYPKSINYWTKENGE--II-------------------------------------AQ--VPPM 57 (194)
Q Consensus 19 ~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~--l~-------------------------------------v~--~~p~ 57 (194)
..+.+|+++.|.|.+. .|.+.+.|++++.. +. |. .+|.
T Consensus 105 ~~v~~G~~v~l~C~~~-~p~~~v~w~~~~~~~~~~~~~~~~~~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~~~p~ 183 (289)
T 3mjg_X 105 IFLTEITEITIPCRVT-DPQLVVTLHEKKGDVALPVPYDHQRGFSGIFEDRSYICKTTIGDREVDSDAYYVYRLQVSSIN 183 (289)
T ss_dssp EEESSCCCEEECCCBS-CTTSCEEEEESSCCSCCCCCEETTTEEEECCCSSEEEEEEEETTEEEECCCEEEEECCCCCCC
T ss_pred EEeecCCeEEEEeEcC-CCCceEEEEeCCCCCccceeecCCcCeeeeccCcEEEEEEEeCCceeeeeeEEEEecCCCCCC
Confidence 5688999999999998 67788999886411 10 11 1444
Q ss_pred EEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEc
Q psy16426 58 IWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKN 137 (194)
Q Consensus 58 i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n 137 (194)
+...+....+.+|+.+.|.|.+.+.|.|.+.|++++......................+.|.|.++..+|.|.|+|.|.|
T Consensus 184 i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 263 (289)
T 3mjg_X 184 VSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTE 263 (289)
T ss_dssp CEEEESCSEEETTSCEEEEEEEESCSSBEEEEECTTSSSSCCCCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEE
T ss_pred cEEeCCcceeEcCCCEEEEEEECCCCCcceEEEcCCccCCCcccccccccCCcceEEEEEEEEcccChhhCcEEEEEeec
Confidence 44444455678999999999999999999999973322111111111111111233467999999999999999999999
Q ss_pred CCCceEEEEEEEcccCCCC
Q psy16426 138 SLGDTDGSIKLYGKKKKKK 156 (194)
Q Consensus 138 ~~g~~~~~~~l~v~~~p~~ 156 (194)
..|...++..|.+...+..
T Consensus 264 ~~G~~~~~~~l~v~~~~~~ 282 (289)
T 3mjg_X 264 SVNDHQDEKAINITVVESG 282 (289)
T ss_dssp TTTTEEEEEEEEEEEEC--
T ss_pred CCCCceeEEEEEEEEEecC
Confidence 9999999998888776554
No 73
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.68 E-value=3.4e-15 Score=115.33 Aligned_cols=85 Identities=24% Similarity=0.312 Sum_probs=66.4
Q ss_pred eeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceE
Q psy16426 64 LVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTD 143 (194)
Q Consensus 64 ~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~ 143 (194)
...+..|+.+.|.|.+.+.|.|.+.|++ ++..+....++.....++ ..+.|.|.++..+|.|.|+|.|.|..|...
T Consensus 231 ~~~v~~g~~~~l~C~~~g~p~p~i~W~~-~g~~~~~~~~~~~~~~~~---~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~ 306 (317)
T 2y25_A 231 VVTIQEGKALNLTCNVWGDPPPEVSWLK-NEKALASDDHCNLKFEAG---RTAYFTINGVSTADSGKYGLVVKNKYGSET 306 (317)
T ss_dssp EEEEETTSBBCEEEEEECSSCCEEEEEE-SSSEECCCSSEEECCBTT---TEEEEEEBSCCSTTCEEEEEEEEETTEEEE
T ss_pred cEEEEcCCEEEEEEEEecCCCCEEEEEE-CCEeCCCCCcEEEEEcCC---CEEEEEECCCCHHHCEEEEEEEEeCCCeEE
Confidence 3456789999999999999999999999 454444444443222212 146999999999999999999999999999
Q ss_pred EEEEEEccc
Q psy16426 144 GSIKLYGKK 152 (194)
Q Consensus 144 ~~~~l~v~~ 152 (194)
..+.|.|..
T Consensus 307 ~~~~l~V~~ 315 (317)
T 2y25_A 307 SDFTVSVFI 315 (317)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEEc
Confidence 888888763
No 74
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.68 E-value=2.2e-15 Score=110.86 Aligned_cols=89 Identities=12% Similarity=0.237 Sum_probs=58.5
Q ss_pred EEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEE-ecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEE
Q psy16426 66 GAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPI-LLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDG 144 (194)
Q Consensus 66 ~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~-~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~ 144 (194)
.+..|+.+.|.|.+.|.|.|.+.|+++++............ ..++.+...+.| .+...|.|.|+|.|.|..|....
T Consensus 127 ~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l---~v~~~d~g~Y~C~a~n~~g~~~~ 203 (222)
T 3sbw_C 127 VDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLFNVTSTL---RINTTTNEIFYCTFRRLDPEENH 203 (222)
T ss_dssp EETTTTEEEEEEEEEEBSCCEEEEEETTCCEECCEEEEEECC----CEEEEEEE---EEECCTTCEEEEEEEETTTTEEE
T ss_pred eecCCCcEEEEEEecCCCCCeEEEEECCCceecCccceEEEcCCCCCEEEEEEE---EEeccCCcEEEEEEEeCccceee
Confidence 34678999999999999999999999546554432211111 111222222333 34468899999999999999999
Q ss_pred EEEEEcccCCCCC
Q psy16426 145 SIKLYGKKKKKKK 157 (194)
Q Consensus 145 ~~~l~v~~~p~~p 157 (194)
.+.|.|...|...
T Consensus 204 ~~~l~v~~~p~~~ 216 (222)
T 3sbw_C 204 TAELVIPELPLAH 216 (222)
T ss_dssp EEEEECCCC----
T ss_pred EEEEEecCCcccC
Confidence 9999887666543
No 75
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.67 E-value=8.5e-16 Score=110.62 Aligned_cols=124 Identities=19% Similarity=0.177 Sum_probs=89.0
Q ss_pred cccccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceE-------E-------------------------
Q psy16426 4 QGQNVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEI-------I------------------------- 51 (194)
Q Consensus 4 ~~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l-------~------------------------- 51 (194)
.++..+|.+...+.. .+.+|++++|.|.+.+ +.+.+.|++++... .
T Consensus 3 ~~~~~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~ 80 (184)
T 2gi7_A 3 SGPLPKPSLQALPSS-LVPLEKPVTLRCQGPP-GVDLYRLEKLSSSRYQDQAVLFIPAMKRSLAGRYRCSYQNGSLWSLP 80 (184)
T ss_dssp CCCBCCCEEEEESCS-EEETTCCEEEEEECST-TCSEEEEEETTTCCEESSSEEEESSCCGGGCEEEEEEEEETTEEBCC
T ss_pred CCCCCCCeEEeCCCc-cccCCCcEEEEEeCCC-CCCEEEEEECCccccCcccEEEECcCChhhCceEEEEEEcCCCccCC
Confidence 467789999988875 7899999999999988 77899999987531 1
Q ss_pred -------Ee---eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEe
Q psy16426 52 -------AQ---VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIK 121 (194)
Q Consensus 52 -------v~---~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~ 121 (194)
|. .+|.+...+ ...+.+|+.+.|.|.+.+. ++.+.|+++ +........ .......|.|.
T Consensus 81 s~~~~l~V~~~~~~p~i~~~p-~~~v~~G~~v~l~C~~~~~-~~~~~w~k~-g~~~~~~~~--------~~~~~~~L~i~ 149 (184)
T 2gi7_A 81 SDQLELVATGVFAKPSLSAQP-GPAVSSGGDVTLQCQTRYG-FDQFALYKE-GDPAPYKNP--------ERWYRASFPII 149 (184)
T ss_dssp CCCEEEEEESSSCCCEEEEEC-CCSSCCTTCEEEEEECSSC-CCEEEEEEC-CCCTTSCCC--------CEEEEESSSEE
T ss_pred CCCEEEEecCcCCCCEEEeCC-CceecCCCcEEEEEEcCCC-CcEEEEEEC-CCcCcceec--------CCCceEEEEEc
Confidence 11 123333332 2345689999999998765 468889994 433322111 01224588999
Q ss_pred ecCCCCCeEEEEEEEcCCC
Q psy16426 122 AVTKQDFGAYKCVSKNSLG 140 (194)
Q Consensus 122 ~~~~~d~g~y~C~a~n~~g 140 (194)
++..+|.|.|+|.|.|..+
T Consensus 150 ~v~~~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 150 TVTAAHSGTYRCYSFSSRD 168 (184)
T ss_dssp EETTCCSEEEEEEEECTTS
T ss_pred cCCccCCeEEEEEEEeCCC
Confidence 9999999999999999754
No 76
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.67 E-value=1.3e-15 Score=125.90 Aligned_cols=151 Identities=16% Similarity=0.243 Sum_probs=110.6
Q ss_pred cccccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEe-cCceEE-------------------------------
Q psy16426 4 QGQNVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTK-ENGEII------------------------------- 51 (194)
Q Consensus 4 ~~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k-~~~~l~------------------------------- 51 (194)
+.|..||.+...+.+..+.+|++++|.|.+.+.+.+.|.||+ ++..+.
T Consensus 109 l~V~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~v~W~~~~g~~l~~~~~~~~~~~~~L~i~~~~~~d~G~~Y~C~a 188 (524)
T 2ec8_A 109 VFVRDPAKLFLVDRSLYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLPKDLRFIPDPKAGIMIKSVKRAYHRLCLHCSV 188 (524)
T ss_dssp EECCCSSCSBCCCCCCCEETTSCEEECCCBSCCCCSCEEEECSSSCCCCSSCEEEEETTTEEEEESCCGGGTTCEEEEEE
T ss_pred EEECCCCcccccccceEEEcCCeEEEECcCCCCccceEEEEccCCcCcCCCCceeECCCccEEEeccchhhCCceEEEEE
Confidence 345566666667777889999999999999987778999998 443221
Q ss_pred ---------------Ee----eCCeEEeccceeEEeeCCeEEEEEEeeccCCCc-cEEEecCcEE-eeCCCceeEEecCC
Q psy16426 52 ---------------AQ----VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSI-NYWTKENGEI-IAQGSKYEPILLDN 110 (194)
Q Consensus 52 ---------------v~----~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~-v~W~~~~~~~-~~~~~~~~~~~~~~ 110 (194)
|. .+|.+...+....+.+|+.+.|.|.+.+.|.|. +.|++++..+ ....... ....+.
T Consensus 189 ~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~-~~~~~~ 267 (524)
T 2ec8_A 189 DQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNS-WHHGDF 267 (524)
T ss_dssp C----CCCCCCEECCEECCCCSCCEEECSCSEEEEETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEEEEE-EECSSS
T ss_pred EECCceEEEEEEEEEEEeCCCCCCcEEecCCcceEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCcccccccc-ccccCC
Confidence 32 456666666666788999999999999998887 9999954431 1111111 111111
Q ss_pred ceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEcccCCC
Q psy16426 111 AYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGKKKKK 155 (194)
Q Consensus 111 ~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~p~ 155 (194)
.....+.|.|.++..+|.|.|+|.+.|..|.....+.|.|...|.
T Consensus 268 ~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 312 (524)
T 2ec8_A 268 NYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVDKGF 312 (524)
T ss_dssp CEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEEESSCE
T ss_pred ccceEEEEEECCCCHHHCEEEEEEEEecCCceEEEEEEEEeccCc
Confidence 234567999999999999999999999999988888888876543
No 77
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.67 E-value=8.6e-16 Score=117.41 Aligned_cols=140 Identities=17% Similarity=0.235 Sum_probs=98.3
Q ss_pred cCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEec-CceEE-----------------------------------
Q psy16426 8 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKE-NGEII----------------------------------- 51 (194)
Q Consensus 8 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~-~~~l~----------------------------------- 51 (194)
.+|.+.+.+.++.+.+|++++|.|.+.+.|. .+.|+++ +..+.
T Consensus 3 ~~p~v~~~~~~~~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n 81 (291)
T 2wim_A 3 ALLQVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATD 81 (291)
T ss_dssp CCCEEEESCSEEEEETTCCEEEEEEEESCCS-EEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred CCceEEEeccceEecCCCcEEEEEEEeCCCC-ceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEEec
Confidence 5899999999999999999999999999875 8999994 32211
Q ss_pred -------------EeeCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeC-CCceeEEecCCceeEEEE
Q psy16426 52 -------------AQVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQ-GSKYEPILLDNAYKIHMK 117 (194)
Q Consensus 52 -------------v~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 117 (194)
|..+|.+........+.+|+.+.|.|.+.+.|.+.+.|++++..+... ..++ ....+ ..
T Consensus 82 ~~g~~~~~~~~l~v~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~--~~~~~-----~~ 154 (291)
T 2wim_A 82 AKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRF--AMLAN-----NN 154 (291)
T ss_dssp SSSCEEEEEEEEEEECCCBCCSCCCSEEEETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSE--EECTT-----SC
T ss_pred ccCceEEEEEEEEecCCcceEeCCCChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceE--EEccC-----CC
Confidence 222333333334556788999999999999999999999944333221 2222 12222 27
Q ss_pred EEEeecCCCCCeEEEEEEEcCCCceE--EEEEEEcccCCC
Q psy16426 118 LTIKAVTKQDFGAYKCVSKNSLGDTD--GSIKLYGKKKKK 155 (194)
Q Consensus 118 L~i~~~~~~d~g~y~C~a~n~~g~~~--~~~~l~v~~~p~ 155 (194)
|.|.++..+|.|.|+|.+.|..+... ..+.+.+..+|.
T Consensus 155 L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~ 194 (291)
T 2wim_A 155 LQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPA 194 (291)
T ss_dssp EEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCCC
T ss_pred EEEEecchhhCEEEEEEEEECCCCeeEEeeEEEEeccCCc
Confidence 99999999999999999999875543 345555555443
No 78
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.67 E-value=1.1e-16 Score=124.97 Aligned_cols=140 Identities=20% Similarity=0.298 Sum_probs=97.6
Q ss_pred eeeeeCCCcEEEEeeeeccCCceeEEEecCceEE----------------------------------------------
Q psy16426 18 LVGAMEGDQMTLECHSEAYPKSINYWTKENGEII---------------------------------------------- 51 (194)
Q Consensus 18 ~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~---------------------------------------------- 51 (194)
...+.+|++++|.|.+.|.|.+.+.|++++..+.
T Consensus 132 ~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 211 (334)
T 1ry7_B 132 LLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYT 211 (334)
T ss_dssp EEEEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEE
T ss_pred eEEecCCCcEEEEEEccCCCCCeEEEEECCEECcccccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEE
Confidence 4578899999999999999999999999865431
Q ss_pred --Eee----CCeEEe-ccceeEEeeCCeEEEEEEeeccCCCccEEEec---CcEEeeCCCcee-EEecCCc----eeEEE
Q psy16426 52 --AQV----PPMIWI-QNQLVGAMEGDQMTLECHSEAYPKSINYWTKE---NGEIIAQGSKYE-PILLDNA----YKIHM 116 (194)
Q Consensus 52 --v~~----~p~i~~-~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~---~~~~~~~~~~~~-~~~~~~~----~~~~~ 116 (194)
|.. +|.+.. .+....+..|+.+.|.|.+.+.|.|.+.|+++ ++..+....... ....... ....+
T Consensus 212 l~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (334)
T 1ry7_B 212 LDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELE 291 (334)
T ss_dssp EEEECCCCSSCBCCTTCSCCEEEESSCCEEECCCCBCSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCC
T ss_pred EEEecCCCCCCceEecCCCceEEeCCCCEEEEEEEecCCCCeEEEEECCcCCCccccCCCCeeEEEeecCcccccccccc
Confidence 211 122211 12445678899999999999999999999983 222222211110 0011000 00124
Q ss_pred EEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEcccCCCCC
Q psy16426 117 KLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGKKKKKKK 157 (194)
Q Consensus 117 ~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~p~~p 157 (194)
.|.|.++..+|.|.|+|.|.|..|....++.|.|...|...
T Consensus 292 ~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~~ 332 (334)
T 1ry7_B 292 VLSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVVLPAEEEL 332 (334)
T ss_dssp CEEECSCCTTSCSEEEEEEEESSCCEEEEEEEEEECSCCC-
T ss_pred EEEEccCCHHHCEEEEEEEeCCCCeEEEEEEEEEEECCCCc
Confidence 79999999999999999999999999999999998776543
No 79
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.66 E-value=4e-16 Score=114.33 Aligned_cols=136 Identities=18% Similarity=0.295 Sum_probs=90.6
Q ss_pred CeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecC--c-----------------------------eEE-------
Q psy16426 10 PMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKEN--G-----------------------------EII------- 51 (194)
Q Consensus 10 P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~--~-----------------------------~l~------- 51 (194)
|.+...+ .+.+.+|++++|.|.+.+.+.+.+.||+.+ . .|.
T Consensus 2 ~~v~~~~-~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 80 (213)
T 3mj8_L 2 YTLTQPP-LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAG 80 (213)
T ss_dssp CCBBCCS-EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGG
T ss_pred eeEEeCC-cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChh
Confidence 4455566 788999999999999999999999999821 0 011
Q ss_pred --------------------------Ee----eCCeEEeccceeEEeeCCeEEEEEEeeccCC--CccEEEecCcEEeeC
Q psy16426 52 --------------------------AQ----VPPMIWIQNQLVGAMEGDQMTLECHSEAYPK--SINYWTKENGEIIAQ 99 (194)
Q Consensus 52 --------------------------v~----~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~--p~v~W~~~~~~~~~~ 99 (194)
|. .+|.+...+....+..|+.+.|.|.+.+.++ +.+.|++ ++..+..
T Consensus 81 D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k-~g~~l~~ 159 (213)
T 3mj8_L 81 DEADYYCQSWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWEA-DGTPITQ 159 (213)
T ss_dssp GCEEEEEEEEETTTTEEEEBCCEEEEEECSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEE-TTEEECT
T ss_pred hCEEEEEEeccCCcceeEEcCceEEEEeCCCCCCCeEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEEc-CCcccCC
Confidence 11 2233322222222236999999999998643 3899999 5555443
Q ss_pred CCce-eEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEEEE
Q psy16426 100 GSKY-EPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIK 147 (194)
Q Consensus 100 ~~~~-~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~ 147 (194)
.... .....+..+...+.|.|.++..+|.|.|+|.|.|..+....++.
T Consensus 160 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~ 208 (213)
T 3mj8_L 160 GVKTTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEKSLS 208 (213)
T ss_dssp TEEECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEEEEC
T ss_pred CcccCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEeeec
Confidence 2111 11113344555678999999999999999999999876665543
No 80
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.65 E-value=1.7e-15 Score=112.17 Aligned_cols=141 Identities=15% Similarity=0.204 Sum_probs=96.0
Q ss_pred CcccccccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCce------------------EE-----------
Q psy16426 1 MEKQGQNVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGE------------------II----------- 51 (194)
Q Consensus 1 ~~~~~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~------------------l~----------- 51 (194)
|...++..+|.|...+. ..+.+|++|+|.|.+.+ +.+.+.|++++.. +.
T Consensus 1 ~~~~~~~~~P~i~~~p~-~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 78 (218)
T 1uct_A 1 MAQEGDFPMPFISAKSS-PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGR 78 (218)
T ss_dssp --CGGGSCCCCEEESSC-SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEECSEECC----CCCEEEECSCCGGGCEE
T ss_pred CCcCCCCCCCEEEecCC-CccCCCCCEEEEEEcCC-CCCEEEEEECCCcccccccccCCCCcceeeEEEEcccccccCEE
Confidence 55677889999998887 57899999999999987 6789999987532 21
Q ss_pred ---------------------Ee---eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEe
Q psy16426 52 ---------------------AQ---VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPIL 107 (194)
Q Consensus 52 ---------------------v~---~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~ 107 (194)
|. .+|.+...+ ...+.+|+.+.|.|...+.+.+.+.|+++ +...... . ..
T Consensus 79 Y~C~a~n~~~~~~~s~~~~l~V~~~~~~P~i~~~p-~~~v~~G~~v~L~C~~~~~~~~~~~W~k~-g~~~~~~--~--~~ 152 (218)
T 1uct_A 79 YQCQYRIGHYRFRYSDTLELVVTGLYGKPFLSADR-GLVLMPGENISLTCSSAHIPFDRFSLAKE-GELSLPQ--H--QS 152 (218)
T ss_dssp EEEEEEETTTEEEECCCEEEEEECSSCCCEEEESS-CSEECTTCCCEEEEECSSSCCSEEEEEET-TCSSCCS--E--EE
T ss_pred EEEEEEcCCCceeecCCEEEEEcCcccCCEEEeCC-CCccCCCCCEEEEEeCCCCCCCEEEEEEC-CCccccc--c--cC
Confidence 11 123333333 34567899999999766777788999994 4333221 1 11
Q ss_pred cCCceeEEEEEEEeecCCCCCeEEEEEEEcCCC-----ceEEEEEEEcccC
Q psy16426 108 LDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLG-----DTDGSIKLYGKKK 153 (194)
Q Consensus 108 ~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g-----~~~~~~~l~v~~~ 153 (194)
... ...|.|.+++.+|.|.|+|.|.|... ..+..+.|.|...
T Consensus 153 ~~~----~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~ 199 (218)
T 1uct_A 153 GEH----PANFSLGPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDS 199 (218)
T ss_dssp CSS----SEEEECCSCCGGGCEEEEEEEECTTSTTEECCCCCCEEEEEC--
T ss_pred CCc----cCEEEEccCCcccCEEEEEEEEcCCCCCcCCCCCCcEEEEEecC
Confidence 111 35899999999999999999998632 1234566666544
No 81
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.65 E-value=1.6e-15 Score=118.23 Aligned_cols=124 Identities=16% Similarity=0.279 Sum_probs=79.0
Q ss_pred eeeeeCCCcEEEEeeeeccCCc--eeEEEecCceEE--------------------------------------------
Q psy16426 18 LVGAMEGDQMTLECHSEAYPKS--INYWTKENGEII-------------------------------------------- 51 (194)
Q Consensus 18 ~~~v~~G~~v~L~C~~~g~p~~--~v~W~k~~~~l~-------------------------------------------- 51 (194)
...+.+|++++|.|.+.|.|++ .+.|++++..+.
T Consensus 126 ~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~ 205 (327)
T 2wng_A 126 AARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQ 205 (327)
T ss_dssp SSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCCEEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSC
T ss_pred ccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEccccccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccC
Confidence 3667899999999999998765 899999864431
Q ss_pred -------------EeeCCeEEeccceeEEeeCCeEEEEEEeeccCCC--ccEEEecCcEEeeCCCceeE-EecCCceeEE
Q psy16426 52 -------------AQVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKS--INYWTKENGEIIAQGSKYEP-ILLDNAYKIH 115 (194)
Q Consensus 52 -------------v~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p--~v~W~~~~~~~~~~~~~~~~-~~~~~~~~~~ 115 (194)
+..+|.+...... +.+|+.+.|.|.+.+.+++ .+.|++ ++..+........ ...++.+...
T Consensus 206 ~~~~~~~~~~~~~v~~~P~i~~~~~~--~~~G~~v~l~C~~~g~~p~~~~v~W~k-~g~~l~~~~~~~~~~~~~g~~~~~ 282 (327)
T 2wng_A 206 GDPLRGTANLSETIRVPPTLEVTQQP--VRAENQVNVTCQVRKFYPQRLQLTWLE-NGNVSRTETASTVTENKDGTYNWM 282 (327)
T ss_dssp SCCEEEEEEGGGTBCBCCEEEEEEEC--CSSTTCCEEEEEEEEEBSSCEEEEEEE-TTEEEEEEECCSCEECTTSCEEEE
T ss_pred CCcccceEEeccccCCCCEEEEecCC--cCCCCcEEEEEEEccccCCCcEEEEEE-CCeEccCcccCceEECCCCcEEEE
Confidence 1123333322221 4589999999999986544 689999 5544432211111 2233445556
Q ss_pred EEEEEeecCCCCCeEEEEEEEcCCCceEE
Q psy16426 116 MKLTIKAVTKQDFGAYKCVSKNSLGDTDG 144 (194)
Q Consensus 116 ~~L~i~~~~~~d~g~y~C~a~n~~g~~~~ 144 (194)
+.|.|..+..+|.|.|+|.|.|..+....
T Consensus 283 ~~L~i~~~~~~d~G~Y~C~a~N~~~~~~s 311 (327)
T 2wng_A 283 SWLLVNVSAHRDDVKLTCQVEHDGQPAVS 311 (327)
T ss_dssp EEEEC-------CCEEEEEEEETTCCCEE
T ss_pred EEEEEccccccCCCEEEEEEEeCCCCCch
Confidence 78999999999999999999999887543
No 82
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.65 E-value=1.9e-15 Score=110.73 Aligned_cols=137 Identities=14% Similarity=0.276 Sum_probs=91.3
Q ss_pred eEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCc-------------------------------eEE--------
Q psy16426 11 MIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENG-------------------------------EII-------- 51 (194)
Q Consensus 11 ~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~-------------------------------~l~-------- 51 (194)
.++..+.++.+.+|++++|.|.+.+.|.+.|.||+++. .|.
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 82 (213)
T 3d9a_L 3 VLTQSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETED 82 (213)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eEEeCCccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhh
Confidence 45666788899999999999999999888999998431 111
Q ss_pred -----------------------Eee---CCeEEeccceeEEeeCCeEEEEEEeec-cCCC-ccEEEecCcEEeeCC-Cc
Q psy16426 52 -----------------------AQV---PPMIWIQNQLVGAMEGDQMTLECHSEA-YPKS-INYWTKENGEIIAQG-SK 102 (194)
Q Consensus 52 -----------------------v~~---~p~i~~~~~~~~~~~g~~~~l~C~~~~-~p~p-~v~W~~~~~~~~~~~-~~ 102 (194)
|.. +|.+...........|..+.|.|.+.+ .|.+ .+.|++ ++..+... ..
T Consensus 83 ~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k-~g~~~~~~~~~ 161 (213)
T 3d9a_L 83 FGMYFCQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKI-DGSERQNGVLN 161 (213)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEE-TTEEECTTEEE
T ss_pred CEEEEEeeecCCcceeCCCEEEEEecCCCCceeEeECCChhhcCCCcEEEEEEEeeecCCceEEEEEc-CCCcCcceeee
Confidence 111 333333222222236889999999987 4554 789999 55554433 11
Q ss_pred -eeE-EecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEEEEE
Q psy16426 103 -YEP-ILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKL 148 (194)
Q Consensus 103 -~~~-~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l 148 (194)
... ...++.+...+.|.|.++..+|.|.|+|.|.|..........+
T Consensus 162 ~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~i 209 (213)
T 3d9a_L 162 SWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSF 209 (213)
T ss_dssp EECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSSCEEEEE
T ss_pred cCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCCceEEEe
Confidence 100 1122334556799999999999999999999987665433333
No 83
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.65 E-value=3e-15 Score=108.87 Aligned_cols=134 Identities=11% Similarity=0.120 Sum_probs=88.3
Q ss_pred EEEcCCeeeeeCCCcEEEEeeeeccCC-----ceeEEEecCce---------------------EE--------------
Q psy16426 12 IWIQNQLVGAMEGDQMTLECHSEAYPK-----SINYWTKENGE---------------------II-------------- 51 (194)
Q Consensus 12 ~~~~~~~~~v~~G~~v~L~C~~~g~p~-----~~v~W~k~~~~---------------------l~-------------- 51 (194)
+..++.++.+.+|+++.|.|.+.+.|. +.+.|++++.. |.
T Consensus 5 v~~p~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 84 (202)
T 3bp6_B 5 VTAPKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRC 84 (202)
T ss_dssp EECSCSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEE
T ss_pred EecCCcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEE
Confidence 444556788999999999999999876 88999992211 11
Q ss_pred ----------------EeeCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEE
Q psy16426 52 ----------------AQVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIH 115 (194)
Q Consensus 52 ----------------v~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (194)
|..++... ......+..|+.+.|.|.+.|.|.|.+.|++++..... ......++. .
T Consensus 85 ~~~~~~~~~~~~~~l~V~~~~~~p-~~~~~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~----~~~~~~~~~---~ 156 (202)
T 3bp6_B 85 LVICGAAWDYKYLTVKVKASYMRI-DTRILEVPGTGEVQLTCQARGYPLAEVSWQNVSVPANT----SHIRTPEGL---Y 156 (202)
T ss_dssp EEEETTEEEEEEEEEEEEBCCCCE-EEEEEECTTTCCEEEEEEEEEBSCCEEEETTCCSCCEE----EEEECTTSC---E
T ss_pred EEEeCCCcceEEEEEEecCCCCcc-cEEEEecCCCCeEEEEEEccccCCceEEEEeCCCCccC----ceeeCCCCC---E
Confidence 11111000 00011235789999999999999999999984432211 001112221 3
Q ss_pred EEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEcccC
Q psy16426 116 MKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGKKK 153 (194)
Q Consensus 116 ~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~ 153 (194)
..+.|..+..+|.|.|+|.|.|..|.....+.|.+...
T Consensus 157 ~~~~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v~~~ 194 (202)
T 3bp6_B 157 QVTSVLRLKPQPSRNFSCMFWNAHMKELTSAIIDPLSR 194 (202)
T ss_dssp EEEEEEEECCCTTCCEEEEEEETTTTEEEEEEECC---
T ss_pred EEEEEEEEEcCCCCEEEEEEEcCCcccccEEEEEecCc
Confidence 46678888899999999999999999998888877544
No 84
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.64 E-value=8.3e-17 Score=124.34 Aligned_cols=131 Identities=18% Similarity=0.305 Sum_probs=93.0
Q ss_pred cCCeeeeeCCCcEEEEeee-eccCCceeEEEecCceEE------------------------------------------
Q psy16426 15 QNQLVGAMEGDQMTLECHS-EAYPKSINYWTKENGEII------------------------------------------ 51 (194)
Q Consensus 15 ~~~~~~v~~G~~v~L~C~~-~g~p~~~v~W~k~~~~l~------------------------------------------ 51 (194)
.+.......|+++.|.|.+ .|.|.+.+.|++++..+.
T Consensus 120 ~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~ 199 (308)
T 4fom_A 120 GPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKD 199 (308)
T ss_dssp CSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSC
T ss_pred ccceeEEcCCceEEEEEEecCCcCCceEEEEECCcccccccceeeeecccccccceEEeeeecCCccEEEEEEccCCCCc
Confidence 3444555678899999985 678999999999876542
Q ss_pred --------EeeCCeEEecc-ceeEEeeCCeEEEEEEeeccCCC-ccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEe
Q psy16426 52 --------AQVPPMIWIQN-QLVGAMEGDQMTLECHSEAYPKS-INYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIK 121 (194)
Q Consensus 52 --------v~~~p~i~~~~-~~~~~~~g~~~~l~C~~~~~p~p-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~ 121 (194)
|..+|.+.... ....+..|+.+.|.|.+.|.|.| .+.|++++..+ .... ...+ ...|.|.
T Consensus 200 ~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~k~~~~~-~~~~----~~~~-----~~~l~i~ 269 (308)
T 4fom_A 200 IRYSFILDIQYAPEVSVTGYDGNWFVGRKGVNLKCNADANPPPFKSVWSRLDGQW-PDGL----LASD-----NTLHFVH 269 (308)
T ss_dssp EEEEEECCCCEEEEECCBCCCSCEETTCCSCEEECCEEEESCEEEEECCBSSSCC-CSSC----BCST-----TEEECCS
T ss_pred eEEeEEEEEecCCeeEEcccceeeeeccccEEEEEEEecCCCCcEEEEEECCeEC-CCcE----EEcC-----CeEEEEC
Confidence 22233333222 22334567889999999999988 58899854433 2221 1112 2366788
Q ss_pred ecCCCCCeEEEEEEEcCCCceEEEEEEEcccCCC
Q psy16426 122 AVTKQDFGAYKCVSKNSLGDTDGSIKLYGKKKKK 155 (194)
Q Consensus 122 ~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~p~ 155 (194)
+++.+|.|.|+|.|.|.+|...+.+.|.|.++|.
T Consensus 270 ~v~~~d~G~Y~C~A~N~~G~~~~~~~l~V~~~P~ 303 (308)
T 4fom_A 270 PLTFNYSGVYICKVTNSLGQRSDQKVIYISDPPH 303 (308)
T ss_dssp CCCSCCCSEEEEEEEETTEEEEEEEECCEECCC-
T ss_pred CCChhhCEEEEEEEEeCCCcEEEEEEEEEEcCCC
Confidence 8999999999999999999999999999988775
No 85
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.64 E-value=3.4e-15 Score=115.48 Aligned_cols=132 Identities=20% Similarity=0.259 Sum_probs=97.0
Q ss_pred eeeeCCCcEEEEeee------eccCCceeEEEecCceEE-----------------------------E-----------
Q psy16426 19 VGAMEGDQMTLECHS------EAYPKSINYWTKENGEII-----------------------------A----------- 52 (194)
Q Consensus 19 ~~v~~G~~v~L~C~~------~g~p~~~v~W~k~~~~l~-----------------------------v----------- 52 (194)
..+.+|++++|.|.+ .|.|.+.+.|++++..+. +
T Consensus 113 ~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~ 192 (315)
T 1itb_B 113 QKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPI 192 (315)
T ss_dssp EEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSSSEEEETTEEEESSCCGGGCEEEEEEEEEEETTEEEEE
T ss_pred eEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccceEeecCceEEEEeceehhCcEEEEEEEcCCCCcEEEE
Confidence 567889999999998 888999999999886652 0
Q ss_pred -------------eeCCeEEeccc-eeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCcee----EEecCC----
Q psy16426 53 -------------QVPPMIWIQNQ-LVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYE----PILLDN---- 110 (194)
Q Consensus 53 -------------~~~p~i~~~~~-~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~----~~~~~~---- 110 (194)
..+|.+..... ...+.+|+.+.|.|.+.+.|.|.+.|++ ++..+....... ......
T Consensus 193 ~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~-~g~~i~~~~~~~~~~~~~~~~~~~~~ 271 (315)
T 1itb_B 193 TRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKW-NGSVIDEDDPVLGEDYYSVENPANKR 271 (315)
T ss_dssp EEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEEEEECTTSEEEEEE-TTEECCTTCSSEEEEEEEECCSSCGG
T ss_pred EEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEEEecCCCCeeEEEE-CCEECCcccccccccceeeeccCCCc
Confidence 12343332222 2456789999999999999999999999 555554432111 011110
Q ss_pred ceeEEEEEEEeecCCCC-CeEEEEEEEcCCCceEEEEEEEcc
Q psy16426 111 AYKIHMKLTIKAVTKQD-FGAYKCVSKNSLGDTDGSIKLYGK 151 (194)
Q Consensus 111 ~~~~~~~L~i~~~~~~d-~g~y~C~a~n~~g~~~~~~~l~v~ 151 (194)
.....+.|.|.++..+| .|.|+|.|.|..|...+.+.|.|.
T Consensus 272 ~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~ 313 (315)
T 1itb_B 272 RSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYP 313 (315)
T ss_dssp GEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEEEEEEEECC
T ss_pred eeEEEEEEEEeecCHHHcCCceEEEEecCCCceeEEEEEEec
Confidence 11235689999999999 999999999999999999888774
No 86
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.64 E-value=1.8e-15 Score=120.74 Aligned_cols=82 Identities=27% Similarity=0.421 Sum_probs=62.3
Q ss_pred eEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEE
Q psy16426 65 VGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDG 144 (194)
Q Consensus 65 ~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~ 144 (194)
..+.+|+.+.|.|.+.|.|.|.+.|+++++........ .... ...|.|.++..+|.|.|+|.|.|..|....
T Consensus 215 ~~~~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~~---~~~~-----~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~ 286 (384)
T 3kld_A 215 VPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKAR---RHKS-----NGILEIPNFQQEDAGSYECVAENSRGKNVA 286 (384)
T ss_dssp EEEETTSCEEEEEEEEEESCCEEEEEETTCCCCCTTCE---ECTT-----SCEEEECSCCGGGCEEEEEEEEETTEEEEE
T ss_pred eEecCCCcEEEEEEEeecCCCcEEEEeCCCccccccce---ecCC-----CcEEEECCCChhhCEEEEEEEEcCCCeEEE
Confidence 33567999999999999999999999855544332211 1111 238999999999999999999999998887
Q ss_pred EEEEEcccCC
Q psy16426 145 SIKLYGKKKK 154 (194)
Q Consensus 145 ~~~l~v~~~p 154 (194)
...|.|...|
T Consensus 287 ~~~l~v~~~P 296 (384)
T 3kld_A 287 KGQLTFYAQP 296 (384)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEEEecCC
Confidence 7777765543
No 87
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.64 E-value=5.1e-15 Score=108.96 Aligned_cols=139 Identities=17% Similarity=0.276 Sum_probs=91.7
Q ss_pred CeeeeeCCCcEEEEeeeeccCC-----ceeEEEecCceE---------------------------------E-------
Q psy16426 17 QLVGAMEGDQMTLECHSEAYPK-----SINYWTKENGEI---------------------------------I------- 51 (194)
Q Consensus 17 ~~~~v~~G~~v~L~C~~~g~p~-----~~v~W~k~~~~l---------------------------------~------- 51 (194)
.++.+.+|++++|.|.+.+.+. +.+.|++++... .
T Consensus 3 ~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~ 82 (222)
T 4i0k_A 3 DPVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVT 82 (222)
T ss_dssp CCCCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGG
T ss_pred CCEEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCcccc
Confidence 4567889999999999888654 789999876321 1
Q ss_pred ----------------------EeeC---CeEEeccceeEEeeCCeEEEEEEe-eccCCCccEEEecCcEEeeCCCceeE
Q psy16426 52 ----------------------AQVP---PMIWIQNQLVGAMEGDQMTLECHS-EAYPKSINYWTKENGEIIAQGSKYEP 105 (194)
Q Consensus 52 ----------------------v~~~---p~i~~~~~~~~~~~g~~~~l~C~~-~~~p~p~v~W~~~~~~~~~~~~~~~~ 105 (194)
|..+ |.+...+ ...+..|+.+.|.|.+ .+.|.+.+.|+++++...........
T Consensus 83 D~G~Y~C~~~~~~~~~~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~~~~ 161 (222)
T 4i0k_A 83 DEGSYTCFVSIQDFDSAAVSLQVAAPYSKPSMTLEP-NKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVTTSQ 161 (222)
T ss_dssp GCSCEEEEEEECCCCCCCCCCCCCBCCCCCEEECCC------CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEEEEE
T ss_pred cCEEEEEEEEeCCCceEEEEEEEEcCCCCCcEEeCC-CceecCCceEEEEEecccccCCCeEEEEcCCCccCCCCcceeE
Confidence 2211 3343332 2345679999999999 78899999999855544332211111
Q ss_pred EecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEcccCCCCCh
Q psy16426 106 ILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGKKKKKKKK 158 (194)
Q Consensus 106 ~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~p~~p~ 158 (194)
..... .....|.|.++..+|.|.|+|.+.|..|.....+.|.|...|....
T Consensus 162 ~~~~~--~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~ 212 (222)
T 4i0k_A 162 MANER--GLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQPLTFP 212 (222)
T ss_dssp EECTT--SCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC------
T ss_pred EcCCC--CeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEeCCccccC
Confidence 11111 1234688999999999999999999999999999999887765443
No 88
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.64 E-value=3.5e-15 Score=115.84 Aligned_cols=143 Identities=15% Similarity=0.163 Sum_probs=93.0
Q ss_pred cccccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceEE--------------------------------
Q psy16426 4 QGQNVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEII-------------------------------- 51 (194)
Q Consensus 4 ~~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~-------------------------------- 51 (194)
.++..+|.|...+. ..+.+|++++|.|.+.+. .+.+.|++++..+.
T Consensus 19 ~~~~~~P~i~~~p~-~~v~~G~~v~L~C~~~~~-~~~~~W~k~g~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 96 (316)
T 3vh8_G 19 MGGQDKPFLSAWPS-AVVPRGGHVTLRCHYRHR-FNNFMLYKEDRIHIPIFHGRIFQESFNMSPVTTAHAGNYTCRGSHP 96 (316)
T ss_dssp -----CCEEEEESC-SEEETTSCEEEEEEBTTB-CCSEEEEESSCSSSCHHHHCCBSSCEEECSCCGGGCEEEEEEEBCS
T ss_pred cCCCCCCEeeccCC-CccCCCCCEEEEEEccCC-CceEEEEeCCCccceeecCCcceEEEEECCCCcccCeEEEEEEEcC
Confidence 45678999999988 568899999999999987 68899999875431
Q ss_pred ----------------Ee---eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCce
Q psy16426 52 ----------------AQ---VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAY 112 (194)
Q Consensus 52 ----------------v~---~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~ 112 (194)
|. .+|.+...+... +.+|+.+.|.|.+.+ +++.+.|++++..+ ....... .... .
T Consensus 97 ~~~~~~~~~s~~~~l~V~~~~~~p~~~~~~~~~-v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~-~~~~~~~-~~~~--~ 170 (316)
T 3vh8_G 97 HSPTGWSAPSNPVVIMVTGNHRKPSLLAHPGPL-VKSGERVILQCWSDI-MFEHFFLHKEGISK-DPSRLVG-QIHD--G 170 (316)
T ss_dssp SSSSSBCCCCCCEEEEEECSSCCCEEEEESCSE-EETTCCEEEEEEESS-CCSEEEEEETTCCS-CCEEEEC-EEET--T
T ss_pred CCCcceecCCCcEEEEEecCCCCCeEEecCCCc-cCCCCeEEEEEcCCC-CCcEEEEEECCCcc-ccceeee-eecC--C
Confidence 11 123333333322 678999999999954 56678899844332 1111100 1111 1
Q ss_pred eEEEEEEEeecCCCCCeEEEEEEEcCCCce-----EEEEEEEcccCC
Q psy16426 113 KIHMKLTIKAVTKQDFGAYKCVSKNSLGDT-----DGSIKLYGKKKK 154 (194)
Q Consensus 113 ~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~-----~~~~~l~v~~~p 154 (194)
.....|.|.++..+|.|.|+|.+.|..|.. ...+.|.|...+
T Consensus 171 ~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~ 217 (316)
T 3vh8_G 171 VSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPY 217 (316)
T ss_dssp EEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSS
T ss_pred CceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecCCC
Confidence 224689999999999999999999987742 334555554433
No 89
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.64 E-value=3.4e-15 Score=123.39 Aligned_cols=144 Identities=12% Similarity=0.229 Sum_probs=98.4
Q ss_pred ccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCc--eeEEEecCceE----------------------E-----------
Q psy16426 7 NVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKS--INYWTKENGEI----------------------I----------- 51 (194)
Q Consensus 7 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~--~v~W~k~~~~l----------------------~----------- 51 (194)
..+|.+.+.+....+.+|++++|.|.+.|.+++ .|.|++++..+ +
T Consensus 112 ~~~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G 191 (523)
T 2rcj_C 112 KANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHR 191 (523)
T ss_pred CcCCeEEecCCcccccCCCceEEEEEeccccCCceEEEEecCCCCCCCceEeccccccCCCCEEEEEEEEEechhcCCCc
Confidence 467888877777777889999999999997654 99999987432 1
Q ss_pred ----------------E--------eeCCeEEeccceeEEeeCCeEEEEEEeecc-CCC-ccEEEecCcEEeeCCCceeE
Q psy16426 52 ----------------A--------QVPPMIWIQNQLVGAMEGDQMTLECHSEAY-PKS-INYWTKENGEIIAQGSKYEP 105 (194)
Q Consensus 52 ----------------v--------~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~-p~p-~v~W~~~~~~~~~~~~~~~~ 105 (194)
+ ..+|.+........+.+|+.+.|.|.+.+. |.| .+.|++++ ...........
T Consensus 192 ~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~~~~~~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g-~~~~~~~~~~~ 270 (523)
T 2rcj_C 192 SYSCQVTHEGSTVEKTVAPTECSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPQPVTVSWNSGA-LTSGVHTFPAV 270 (523)
T ss_pred eEEEEEEecCcccccceeeeecCCCCcCCEEEecCCCcccccCCceEEEEEEeceeCCCeEEEEecCC-cccceEeCCcE
Confidence 0 112333322222335689999999999886 767 79999944 33211111111
Q ss_pred EecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEccc
Q psy16426 106 ILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGKK 152 (194)
Q Consensus 106 ~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~ 152 (194)
...++.+...+.|.|.++..+| |.|+|.|.|..|.......|.+..
T Consensus 271 ~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~~~~~~l~v~~ 316 (523)
T 2rcj_C 271 LQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPLS 316 (523)
T ss_pred ecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCcceEEecCCCc
Confidence 1223344556799999999999 999999999999876666665443
No 90
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.63 E-value=1.8e-14 Score=104.01 Aligned_cols=119 Identities=16% Similarity=0.258 Sum_probs=84.8
Q ss_pred cCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceEE------------------------------------
Q psy16426 8 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEII------------------------------------ 51 (194)
Q Consensus 8 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~------------------------------------ 51 (194)
.+|.|...+.. .+.+|++|+|.|.+.+. .+.+.|++++..+.
T Consensus 3 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~ 80 (188)
T 1oll_A 3 PKPFIWAEPHF-MVPKEKQVTICCQGNYG-AVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGE 80 (188)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCTT-CCEEEEEETTEEEEEECCSSCTTCCEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCCEEEeecCC-cCCCCCCEEEEEecCCC-CCEEEEEECCCcccccccccCCCcceeEEEeCcCCcccCeEEEEEecCCC
Confidence 57899888876 78999999999998764 56899999875431
Q ss_pred ------------Eee---CCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEE
Q psy16426 52 ------------AQV---PPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHM 116 (194)
Q Consensus 52 ------------v~~---~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (194)
|.. +|.+...+ ...+.+|+.+.|.|.+.+ +.+.+.|++++..+.. .. .... ...
T Consensus 81 ~~~~~s~~~~l~V~~~~~~p~i~~~p-~~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~---~~--~~~~----~~~ 149 (188)
T 1oll_A 81 LWSEPSNLLDLVVTEMYDTPTLSVHP-GPEVISGEKVTFYCRLDT-ATSMFLLLKEGRSSHV---QR--GYGK----VQA 149 (188)
T ss_dssp EECCCCCCEEEEEESCSCCCEEEEES-CSEEETTCEEEEEEECSS-SCSEEEEEEESSSCEE---EE--EECS----SEE
T ss_pred CCCCCCCceEEEecccCCCCeEEECC-CCccccCCEEEEEEEcCC-CCCEEEEEECCccccc---cc--cCCC----cee
Confidence 111 33443333 334678999999999876 4568889985433221 11 1111 146
Q ss_pred EEEEeecCCCCCeEEEEEEEcCC
Q psy16426 117 KLTIKAVTKQDFGAYKCVSKNSL 139 (194)
Q Consensus 117 ~L~i~~~~~~d~g~y~C~a~n~~ 139 (194)
.|.|.+++.+|.|.|+|.+.|..
T Consensus 150 ~L~I~~v~~~d~G~Y~C~a~n~~ 172 (188)
T 1oll_A 150 EFPLGPVTTAHRGTYRCFGSYNN 172 (188)
T ss_dssp EEEEEECCGGGCEEEEEECEEET
T ss_pred EEEECCCCcCCCcEEEEEEEcCC
Confidence 89999999999999999998864
No 91
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.63 E-value=4.9e-15 Score=98.55 Aligned_cols=100 Identities=20% Similarity=0.202 Sum_probs=79.0
Q ss_pred eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEE
Q psy16426 54 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKC 133 (194)
Q Consensus 54 ~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C 133 (194)
.+|.|...+....+.+|+.+.|.|.+.+.|.|.+.|++ ++..+....++.....+. .+.|.|.++..+|.|.|+|
T Consensus 6 ~pp~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k-~~~~~~~~~~~~~~~~~~----~~~L~I~~v~~~D~G~Y~C 80 (114)
T 2cqv_A 6 SGPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMK-FRKQIQESEHMKVENSEN----GSKLTILAARQEHCGCYTL 80 (114)
T ss_dssp CCCEESCCCCSEEEETTCCEEEEEEEESSSSCEEEEEE-SSSBCCCSSSEEEEECSS----EEEEEETTCCTTTCEEEEE
T ss_pred CCCEEEeCCCCeEEeCCCeEEEEEEEEcCCCCEEEEEE-CCEECcCCCCEEEEEcCC----EEEEEECCCChhcCEEEEE
Confidence 36777666777888999999999999999999999999 444444444444332221 4689999999999999999
Q ss_pred EEEcCCCceEEEEEEEcccCCCCCh
Q psy16426 134 VSKNSLGDTDGSIKLYGKKKKKKKK 158 (194)
Q Consensus 134 ~a~n~~g~~~~~~~l~v~~~p~~p~ 158 (194)
.+.|..|...+.+.|.|...|..|.
T Consensus 81 ~a~N~~g~~~~~~~l~V~~~p~~P~ 105 (114)
T 2cqv_A 81 LVENKLGSRQAQVNLTVVDKPDPPA 105 (114)
T ss_dssp EEECSSCEEECCEEEEEECSCSCCC
T ss_pred EEEECCCcEEEEEEEEEECCCCCCC
Confidence 9999999988888898887766553
No 92
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.63 E-value=2.3e-15 Score=98.19 Aligned_cols=94 Identities=23% Similarity=0.345 Sum_probs=74.3
Q ss_pred eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCC--ceeEEecCCceeEEEEEEEeecCCCCCeEE
Q psy16426 54 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGS--KYEPILLDNAYKIHMKLTIKAVTKQDFGAY 131 (194)
Q Consensus 54 ~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~--~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y 131 (194)
.||.|...+..+.+.+|+.+.|.|.+.|.|.|.+.|++ ++..+.... ++.....+. .++|.|.++..+|.|.|
T Consensus 4 ~PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k-~g~~i~~~~~~~~~~~~~~~----~~~L~I~~~~~~D~G~Y 78 (100)
T 3knb_A 4 IPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSC-GGRKIHSQEQGRFHIENTDD----LTTLIIMDVQKQDGGLY 78 (100)
T ss_dssp EEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEE-TTEECCTTGGGTEEEEECSS----EEEEEESSCCGGGCEEE
T ss_pred CCCEEEeCCCcEEEeCCCeEEEEEEEEEecCCEEEEEE-CceEeeeeccceeeeecccc----eEEEEEcCCCccCCEEE
Confidence 35667666677888999999999999999999999999 555554332 333222222 46899999999999999
Q ss_pred EEEEEcCCCceEEEEEEEccc
Q psy16426 132 KCVSKNSLGDTDGSIKLYGKK 152 (194)
Q Consensus 132 ~C~a~n~~g~~~~~~~l~v~~ 152 (194)
+|.|.|..|...+.+.|.|..
T Consensus 79 ~C~a~N~~G~~~~~~~l~V~~ 99 (100)
T 3knb_A 79 TLSLGNEFGSDSATVNIHIRS 99 (100)
T ss_dssp EEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEECCCEEEEEEEEEEEE
Confidence 999999999998888888753
No 93
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.62 E-value=4.7e-15 Score=120.17 Aligned_cols=145 Identities=17% Similarity=0.144 Sum_probs=89.6
Q ss_pred cccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceEE---------------E-------------e----
Q psy16426 6 QNVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEII---------------A-------------Q---- 53 (194)
Q Consensus 6 v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~---------------v-------------~---- 53 (194)
|..+|.+. ...+..+..|+.+.|.|.+.|.|.|.|+|++++..+. + .
T Consensus 137 V~~~p~~~-~~~p~~~~~~~~~~L~C~a~G~P~P~i~W~k~~~~~~~~~~~~~~~~~~~~~~l~~~d~G~Y~C~A~N~~G 215 (423)
T 3qs7_E 137 IRNTLLYT-LRRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEEKVLHELFGTDIRCCARNELG 215 (423)
T ss_dssp EC-----C-EEEEEEEECSSSSCEEEEEEESSCCEEEEEEC-------------CEEECCSEECCCCSSCEEEEEECSSC
T ss_pred EecCcccc-ccCCcEeccCCceEEEEEEeeecCCeEEEEECCCCCccccccccccccccceEEecccCeEEEEEEEcCCC
Confidence 44455442 1233445678899999999999999999999765321 0 0
Q ss_pred ---eC-CeEE------eccceeEEeeCCeEEEEEEeec-cCCCccEEEecCcEEeeCCCcee-EEecCC-ceeEEEEEEE
Q psy16426 54 ---VP-PMIW------IQNQLVGAMEGDQMTLECHSEA-YPKSINYWTKENGEIIAQGSKYE-PILLDN-AYKIHMKLTI 120 (194)
Q Consensus 54 ---~~-p~i~------~~~~~~~~~~g~~~~l~C~~~~-~p~p~v~W~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~L~i 120 (194)
.. -.+. .......+.+|+.+.|.|.+.+ .|.|.+.|++++. .+.....+. ...... .....++|.|
T Consensus 216 ~~~~~~~~l~V~~~p~~~~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~-~l~~~~~~~~~~~~~~~~~~~~~~L~I 294 (423)
T 3qs7_E 216 RECTRLFTIDLNQTPQTTLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENK-ALEEGNYFEMSTYSTNRTMIRILFAFV 294 (423)
T ss_dssp EEEEECEEEESSSCCCSSTTEEEEETTSCEEEEEEEEESSSCCCEEEEESSS-BCCGGGEEEEEEEETTTEEEEEEEEEE
T ss_pred CcceeeEEEEEecCCccCCCceEEeCCCeEEEEEEEEcCCCCcEEEEEECCE-EccccceeecccccCCceeEEEEEEEE
Confidence 00 0011 1223455778999999999998 6678999999444 332221111 111111 1233457999
Q ss_pred eecCCCCCeEEEEEEEcCCCceEEEEEEEcccCCC
Q psy16426 121 KAVTKQDFGAYKCVSKNSLGDTDGSIKLYGKKKKK 155 (194)
Q Consensus 121 ~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~p~ 155 (194)
.++..+|.|.|+|.|.|. ....+.|.|...|.
T Consensus 295 ~~v~~~D~G~Y~C~A~N~---~~~~~~L~V~~~p~ 326 (423)
T 3qs7_E 295 SSVARNDTGYYTCSSSKH---PSQSALVTIVEKGF 326 (423)
T ss_dssp SSCCTTTCEEEEEEETTE---EEEEEEEEEESSCE
T ss_pred eecCHHHCEEEEEEEecC---CCceEEEEEEeCCc
Confidence 999999999999999998 56667777766543
No 94
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.62 E-value=8.4e-15 Score=122.46 Aligned_cols=149 Identities=18% Similarity=0.219 Sum_probs=105.9
Q ss_pred cccccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCcee----EEEe--cCc--e--------------------------
Q psy16426 4 QGQNVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSIN----YWTK--ENG--E-------------------------- 49 (194)
Q Consensus 4 ~~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v----~W~k--~~~--~-------------------------- 49 (194)
+.|..+|.+...+....+.+|++++|.|.+.+.|.+.+ .|++ ++. .
T Consensus 326 l~V~~~p~~~~~~~~~~~~~G~~v~l~C~~~~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~~g~ 405 (585)
T 2ocw_A 326 LFVNEESTIPRSPTVVKGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGT 405 (585)
T ss_pred EEEecccccccCCcceEEEeCCcEEEEEecCCCCCccEEEEEEEEccCCCCCceeeeecceeecccCCCEEEeccCCCcE
Confidence 45677888888888888999999999999999998877 7998 554 1
Q ss_pred --EE-----------------------------Eee-CCeEEeccceeEEeeCCeEEEEEEee----ccCCCccEEEecC
Q psy16426 50 --II-----------------------------AQV-PPMIWIQNQLVGAMEGDQMTLECHSE----AYPKSINYWTKEN 93 (194)
Q Consensus 50 --l~-----------------------------v~~-~p~i~~~~~~~~~~~g~~~~l~C~~~----~~p~p~v~W~~~~ 93 (194)
|. |.. +|.+. .+....+.+|+.+.|.|.+. +.|.+.+.|++++
T Consensus 406 ~~L~I~~v~~~D~G~Y~C~an~~g~~~~~~~l~V~~~~p~~~-~~~~~~v~~G~~v~L~C~~~~~~~~~p~~~v~W~k~g 484 (585)
T 2ocw_A 406 FTVILNQLTSRDAGFYWCLTNGDTLWRTTVEIKIIEGEPNLK-VPGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTG 484 (585)
T ss_pred EEEEECCCChhhCEEEEEcccCCCccceeEEEEEecCccccc-cCCceeEecCCcEEEEEEecCCCCCCccEEEEEeecC
Confidence 21 222 23332 24556678999999999986 6677889999955
Q ss_pred cEEeeCCCce--e-EEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEE-EEEEcccCC
Q psy16426 94 GEIIAQGSKY--E-PILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGS-IKLYGKKKK 154 (194)
Q Consensus 94 ~~~~~~~~~~--~-~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~-~~l~v~~~p 154 (194)
..+....... . ....+ .....+.|.|.++..+|.|.|+|.|.|..|..... +.|.|...|
T Consensus 485 ~~~~~~~~~~~~~~~~~~~-~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~~l~V~~~p 548 (585)
T 2ocw_A 485 CQALPSQDEGPSKAFVNCD-ENSRLVSLTLNLVTRADEGWYWCGVKQGHFYGETAAVYVAVEERK 548 (585)
T ss_pred ceeeeccCCCCCcceEEec-CcccEEEEEECCCCcccCeEEEEEeEeCCCccEEEEEEEEEEeee
Confidence 4443322110 0 11111 11224699999999999999999999999876644 888887765
No 95
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.62 E-value=3.2e-14 Score=107.09 Aligned_cols=141 Identities=15% Similarity=0.215 Sum_probs=93.4
Q ss_pred ccccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceEE---------------------------------
Q psy16426 5 GQNVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEII--------------------------------- 51 (194)
Q Consensus 5 ~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~--------------------------------- 51 (194)
+...+|.|...+.. .+.+|++|+|.|.+.+ +...+.|++++..+.
T Consensus 3 ~~~~kP~i~~~P~~-~v~~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~ 80 (242)
T 1p6f_A 3 QTLPKPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYR 80 (242)
T ss_dssp -CCCCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCSSCTTCCEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCCCCCEEEeeCCC-ccCCCCcEEEEEeeCC-CCcEEEEEECCCccccccccccCCcceeEEEecCCCcccCeEEEEEEe
Confidence 56788999998876 7899999999999875 456899999875431
Q ss_pred ---------------Eee---CCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCcee
Q psy16426 52 ---------------AQV---PPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYK 113 (194)
Q Consensus 52 ---------------v~~---~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~ 113 (194)
|.. +|.+...+ ...+.+|+.+.|.|.+.+. .+.+.|++++..+.. .. ....
T Consensus 81 ~~~~~s~~S~~~~L~V~~~~~~P~i~~~p-~~~v~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~---~~--~~~~---- 149 (242)
T 1p6f_A 81 VGELWSEPSNLLDLVVTEMYDTPTLSVHP-GPEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHV---QR--GYGK---- 149 (242)
T ss_dssp ETTEECCCCCCEEEEEECCSCCCEEEEES-CSEEETTCEEEEEEECTTS-CSEEEEEECSSSCEE---EE--EECS----
T ss_pred cCCccccCCcceEEEeecccCCCceEccC-CCccCCCCcEEEEEecCCC-CCEEEEEECCCccCc---cc--cCCC----
Confidence 111 33333332 2346789999999998764 467889994432221 11 1111
Q ss_pred EEEEEEEeecCCCCCeEEEEEEEcCC---CceEEEEEEEcccCCCCCh
Q psy16426 114 IHMKLTIKAVTKQDFGAYKCVSKNSL---GDTDGSIKLYGKKKKKKKK 158 (194)
Q Consensus 114 ~~~~L~i~~~~~~d~g~y~C~a~n~~---g~~~~~~~l~v~~~p~~p~ 158 (194)
....|.|.+++.+|.|.|+|.+.|.. ...+..+.|.|...+..|.
T Consensus 150 ~~~~l~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~~~~~~P~ 197 (242)
T 1p6f_A 150 VQAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVTGDIENTS 197 (242)
T ss_dssp SEEEEEEEECCGGGCEEEEEEEEEETTEECCCCCCEEEEEEC------
T ss_pred ceEEEEeCCCccccCEEEEEEEECCCCcccCCCCCEEEEEeccCCCCc
Confidence 14689999999999999999998864 2233456777766555444
No 96
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.62 E-value=5.7e-15 Score=108.14 Aligned_cols=133 Identities=14% Similarity=0.244 Sum_probs=90.2
Q ss_pred CeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecC---c----------------------------eEE-------
Q psy16426 10 PMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKEN---G----------------------------EII------- 51 (194)
Q Consensus 10 P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~---~----------------------------~l~------- 51 (194)
|.+...+..+.+.+|++++|.|.+.+.+.+.+.||+.+ . .|.
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (213)
T 3r06_A 2 IQMTQSPSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESE 81 (213)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred CeeEeCCCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcc
Confidence 66777788899999999999999999988999999832 0 111
Q ss_pred ------------------------E---eeCCeEEeccceeEEeeCCeEEEEEEeeccCCC--ccEEEecCcEEeeCCC-
Q psy16426 52 ------------------------A---QVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKS--INYWTKENGEIIAQGS- 101 (194)
Q Consensus 52 ------------------------v---~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p--~v~W~~~~~~~~~~~~- 101 (194)
| ..+|.+...+.......|..+.|.|.+.+.+++ .+.|++ ++..+....
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k-~g~~l~~~~~ 160 (213)
T 3r06_A 82 DIGSYYCQQYYNYPWTFGPGTKLEIKRADAKPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWKV-DGSEKRDGVL 160 (213)
T ss_dssp GCSEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEE-TTEEECTTEE
T ss_pred cCEEEEEecccCCceEEcCCceEEEeccCCCceeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEEE-CCcccCCceE
Confidence 1 223333332222223357789999999987643 788999 555544321
Q ss_pred -ceeE-EecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceE
Q psy16426 102 -KYEP-ILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTD 143 (194)
Q Consensus 102 -~~~~-~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~ 143 (194)
.... ...++.+...+.|.|.....+|.|.|+|.+.|......
T Consensus 161 ~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~~~~ 204 (213)
T 3r06_A 161 QSVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTSTAA 204 (213)
T ss_dssp EEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSC
T ss_pred eccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEecccCcc
Confidence 1111 11233455567889999888899999999999865443
No 97
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.61 E-value=3.8e-17 Score=140.46 Aligned_cols=147 Identities=22% Similarity=0.290 Sum_probs=0.0
Q ss_pred cccccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCce----------------------------------
Q psy16426 4 QGQNVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGE---------------------------------- 49 (194)
Q Consensus 4 ~~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~---------------------------------- 49 (194)
+.|..+|.+...+. ..+.+|++++|.|.+.+.|.+.+.|++++..
T Consensus 545 l~V~~~p~i~~~p~-~~~~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (772)
T 3v2a_R 545 FHVTRGPEITLQPD-MQPTEQESVSLWCTADRSTFENLTWYKLGPQPLPIHVGELPTPVCKNLDTLWKLNATMFSNSTND 623 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEECCceeeccCC-cccccCCceEEEEeccCCCCCCcEEEEcCCcccccccCcccccccccccceeeccceeeecCCCc
Confidence 34556777776665 4577999999999999999999999997632
Q ss_pred ---EE--------------------------------E--eeCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEec
Q psy16426 50 ---II--------------------------------A--QVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKE 92 (194)
Q Consensus 50 ---l~--------------------------------v--~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~ 92 (194)
+. | ..+|.+........+.+|+.+.|.|.+.|.|.|.+.|++
T Consensus 624 ~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~s~~~~l~v~~~~~P~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k- 702 (772)
T 3v2a_R 624 ILIMELKNASLQDQGDYVCLAQDRKTKKRHCVVRQLTVLERVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFK- 702 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eEEEEECCCCccCCcEEEEEEEeCCCCeEEEEEEeecccccCCCEeecCCCceEEeCCCCEEEEEEeCccCCCeEEEEE-
Confidence 11 1 234555444455667789999999999999999999999
Q ss_pred CcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEcccCCCCCh
Q psy16426 93 NGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGKKKKKKKK 158 (194)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~p~~p~ 158 (194)
++..+....++. ..+ ..++|.|.++..+|.|.|+|.|.|..|...+++.|.|...|....
T Consensus 703 ~g~~l~~~~~~~--~~~----~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~p~~~~ 762 (772)
T 3v2a_R 703 DNETLVEDSGIV--LKD----GNRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIEGAQEKTN 762 (772)
T ss_dssp ------------------------------------------------------------------
T ss_pred CCeECcCCCCeE--EcC----CCcEEEECcCCHHHCEEEEEEEEeCCcceeEEEEEEEECCCCccc
Confidence 454444332221 111 135899999999999999999999999999999999988877665
No 98
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.61 E-value=6.2e-15 Score=110.22 Aligned_cols=85 Identities=18% Similarity=0.191 Sum_probs=55.6
Q ss_pred eEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCcee--EE-----------ec--CCce--eEEEEEEEeecCCCC
Q psy16426 65 VGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYE--PI-----------LL--DNAY--KIHMKLTIKAVTKQD 127 (194)
Q Consensus 65 ~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~--~~-----------~~--~~~~--~~~~~L~i~~~~~~d 127 (194)
..+.+|+.+.|.|.+.+.|.|.+.|++ ++..+....... .+ .. .... .....|.|.++..+|
T Consensus 146 ~~v~~g~~v~L~C~~~g~p~p~v~W~k-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D 224 (250)
T 2fbo_J 146 VQVDEGNDITMTCPCTDCANANVTWYT-GPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITD 224 (250)
T ss_dssp EECCTTCCEEECCCEESCTTCEEEEEE-EEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGG
T ss_pred EEecCCCcEEEEEEecCCCCCeeEEEe-CCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCccc
Confidence 444569999999999999999999999 444332211100 00 00 0000 012489999999999
Q ss_pred CeEEEEEEEcCC---CceEEEEEEEc
Q psy16426 128 FGAYKCVSKNSL---GDTDGSIKLYG 150 (194)
Q Consensus 128 ~g~y~C~a~n~~---g~~~~~~~l~v 150 (194)
.|.|+|.|.|.. |....++.|.|
T Consensus 225 ~G~Y~C~a~N~~g~~g~~~~~~~l~V 250 (250)
T 2fbo_J 225 AGRVWCELATGQGELDADRSSTILKV 250 (250)
T ss_dssp CEEEEEEEESSSSGGGEEEEEEEEEC
T ss_pred CEEEEEEecCCccccCccceeEEEeC
Confidence 999999999954 45555665543
No 99
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.61 E-value=9.5e-15 Score=106.88 Aligned_cols=130 Identities=13% Similarity=0.286 Sum_probs=86.5
Q ss_pred eEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecC--c-----------------------------eEE--------
Q psy16426 11 MIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKEN--G-----------------------------EII-------- 51 (194)
Q Consensus 11 ~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~--~-----------------------------~l~-------- 51 (194)
.+.. +.++.+.+|++++|.|.+.+.|.+.+.||+++ . .|.
T Consensus 3 ~v~q-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 81 (210)
T 1lk3_L 3 VLTQ-PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADD 81 (210)
T ss_dssp CEEC-CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred cEEC-CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHH
Confidence 3455 77788999999999999999888899999842 1 111
Q ss_pred -----------------------Eee---CCeEEeccceeEEeeCCeEEEEEEeecc-CCC-ccEEEecCcEEeeCC-Cc
Q psy16426 52 -----------------------AQV---PPMIWIQNQLVGAMEGDQMTLECHSEAY-PKS-INYWTKENGEIIAQG-SK 102 (194)
Q Consensus 52 -----------------------v~~---~p~i~~~~~~~~~~~g~~~~l~C~~~~~-p~p-~v~W~~~~~~~~~~~-~~ 102 (194)
|.. +|.+...........|+.+.|.|.+.+. |.+ .+.|++ ++..+... ..
T Consensus 82 ~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k-~g~~~~~~~~~ 160 (210)
T 1lk3_L 82 TAIYFCQQSWNGPLTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKI-DGTERRDGVLD 160 (210)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEE-TTEECCTTEEE
T ss_pred CeEEEEEEEcCCCceeCCCEEEEEcCCCcCCeEEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEe-CCccCCCCceE
Confidence 111 2333322211112358899999999874 443 789999 55544333 11
Q ss_pred -eeE-EecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCce
Q psy16426 103 -YEP-ILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDT 142 (194)
Q Consensus 103 -~~~-~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~ 142 (194)
... ...++.+...+.|.|.++..+|.|.|+|.|.|.....
T Consensus 161 ~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 202 (210)
T 1lk3_L 161 SVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSS 202 (210)
T ss_dssp EECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred ccCCccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCCC
Confidence 110 1123345566799999999999999999999986644
No 100
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.60 E-value=2.6e-15 Score=130.20 Aligned_cols=146 Identities=21% Similarity=0.287 Sum_probs=103.3
Q ss_pred cccCCeEEE-cCCeeeeeCCCcEEEEeeeeccCC-ceeEEEecCceEE--------------------------------
Q psy16426 6 QNVPPMIWI-QNQLVGAMEGDQMTLECHSEAYPK-SINYWTKENGEII-------------------------------- 51 (194)
Q Consensus 6 v~~~P~~~~-~~~~~~v~~G~~v~L~C~~~g~p~-~~v~W~k~~~~l~-------------------------------- 51 (194)
+..+|.+.. ......+.+|++++|.|.+.+.+. +.+.|++++..+.
T Consensus 615 v~~~p~~~~~~~~~~~~~~G~~v~L~C~~~~~~~~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 694 (816)
T 3dmk_A 615 VMVLPRIIPFAFEEGPAQVGQYLTLHCSVPGGDLPLNIDWTLDGQAISEDLGITTSRVGRRGSVLTIEAVEASHAGNFTC 694 (816)
T ss_dssp EECCCCCBCCCCCSSCEESSCEEEEEEBCCCSSSCCEEEEEETTBCCCGGGTCEEEEETTTEEEEEEESCCGGGCEEEEE
T ss_pred EecCCccccccccccccCCCCeEEEEEEEeCCCCCCEEEEEECCeEcCCCCCeeEEEcCCCeeEEEEccCChhhCEEEEE
Confidence 345555433 224556889999999999986554 4899999875431
Q ss_pred ----------------EeeCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEE
Q psy16426 52 ----------------AQVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIH 115 (194)
Q Consensus 52 ----------------v~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (194)
|..+|.+...+....+..|+.+.|.|.+.|.|.|.+.|+++++......... ...+......
T Consensus 695 ~a~N~~g~~~~~~~l~V~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~--~~~~~~~~~~ 772 (816)
T 3dmk_A 695 HARNLAGHQQFTTPLNVYVPPRWILEPTDKAFAQGSDAKVECKADGFPKPQVTWKKAVGDTPGEYKDL--KKSDNIRVEE 772 (816)
T ss_dssp EEECSSCEEEEEEEECEEEEEEEEECCCCEEEETTCCEEEECEEEEESCCEEECCEECSSSTTCCBCC--CCBTTEEEET
T ss_pred EEEeCCccEEEEEEEEEEeCCceeeecccceecCCCcEEEEEEEecCCCCeEEEEecCCCCCcccccc--ccCCCEEecC
Confidence 5567777766667778899999999999999999999998543221110000 0000001112
Q ss_pred EEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEcccC
Q psy16426 116 MKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGKKK 153 (194)
Q Consensus 116 ~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~ 153 (194)
++|.|.++..+|.|.|+|.|.|..|...+.+.+.....
T Consensus 773 ~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~v~~~~~~~ 810 (816)
T 3dmk_A 773 GTLHVDNIQKTNEGYYLCEAINGIGSGLSAVIMISVQA 810 (816)
T ss_dssp TEEEECSCCGGGCEEEEEEEECSSSSCEEEEEEEEEEC
T ss_pred CEEEECcCChhhCeEEEEEEEeCCCCCcEEEEEEEeec
Confidence 38999999999999999999999999998877765544
No 101
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.60 E-value=1.2e-14 Score=107.98 Aligned_cols=142 Identities=12% Similarity=0.216 Sum_probs=92.7
Q ss_pred cccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecC---c----------------------------eEE---
Q psy16426 6 QNVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKEN---G----------------------------EII--- 51 (194)
Q Consensus 6 v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~---~----------------------------~l~--- 51 (194)
....+.+...+.++.+.+|++++|.|.+.+.+.+.+.|++.+ . .+.
T Consensus 21 ~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 100 (237)
T 3sob_L 21 AYADIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISS 100 (237)
T ss_dssp ---CCCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESS
T ss_pred cCccceEEeCCCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECC
Confidence 345677888888899999999999999999888999999932 0 011
Q ss_pred ----------------------------E---eeCCeEEeccceeEEeeCCeEEEEEEeeccC--CCccEEEecCcEEee
Q psy16426 52 ----------------------------A---QVPPMIWIQNQLVGAMEGDQMTLECHSEAYP--KSINYWTKENGEIIA 98 (194)
Q Consensus 52 ----------------------------v---~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p--~p~v~W~~~~~~~~~ 98 (194)
| ..+|.+...........|+.+.|.|.+.+.+ .+.+.|++ ++....
T Consensus 101 v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k-~g~~~~ 179 (237)
T 3sob_L 101 LQPEDFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKV-DNALQS 179 (237)
T ss_dssp CCGGGCEEEEEEECSSSSCEECCCEEEEEECCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEE-TTEECC
T ss_pred CChhhCeEEEEeeccCCceEEcCcEEEEEecCCCCCceEEeCCChhhccCCceEEEEEEcccCCCceEEEEEE-CCCCCC
Confidence 1 1122222222222223578899999998854 47899999 555443
Q ss_pred CCC--ceeE-EecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEEEEE
Q psy16426 99 QGS--KYEP-ILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKL 148 (194)
Q Consensus 99 ~~~--~~~~-~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l 148 (194)
... .... ...++.+...+.|.|.....+|.|.|+|.+.|..........+
T Consensus 180 ~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~ 232 (237)
T 3sob_L 180 GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSF 232 (237)
T ss_dssp SSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSCEEEEE
T ss_pred CceeecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCCCceeeee
Confidence 321 1110 1123335556789999999999999999999987655444333
No 102
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.59 E-value=2.4e-14 Score=104.72 Aligned_cols=126 Identities=17% Similarity=0.325 Sum_probs=86.8
Q ss_pred CeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecC--c-----------------------------eEE-------
Q psy16426 10 PMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKEN--G-----------------------------EII------- 51 (194)
Q Consensus 10 P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~--~-----------------------------~l~------- 51 (194)
|.++..+.++.+.+|++++|.|.+.+.|.+.+.||+++ . .|.
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (213)
T 3nl4_L 2 VVMTQTPASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECA 81 (213)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGG
T ss_pred ccEEeCCCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChH
Confidence 66778888899999999999999999989999999842 0 111
Q ss_pred --------E---------------------eeCCeEEeccceeEEeeCCeEEEEEEeec-cCCCccEEEecCcEEeeCCC
Q psy16426 52 --------A---------------------QVPPMIWIQNQLVGAMEGDQMTLECHSEA-YPKSINYWTKENGEIIAQGS 101 (194)
Q Consensus 52 --------v---------------------~~~p~i~~~~~~~~~~~g~~~~l~C~~~~-~p~p~v~W~~~~~~~~~~~~ 101 (194)
+ ..+|.+........+..|+.+.|.|.+.+ .|.+.+.|++ ++..+....
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k-~g~~~~~~~ 160 (213)
T 3nl4_L 82 DAATYYCQSTYENPTYVSFGGGTEVGVKGDPVAPTVLIFPPSADLVATGTVTIVCVANKYFPDVTVTWEV-DGTTQTTGI 160 (213)
T ss_dssp GCEEEEEEECCSSTTTCEECCCEEEEEECCCBCCEEEEECCCHHHHTTSEEEEEEEEEEEBSCCEEEEEE-TTEECCSSE
T ss_pred HCEEEEEecCCCCceeEEeCCCeEEEEeCCCcCCeEEEeCCchhhccCCcEeEEEEEecccCCcEEEEEe-CCccCCCCe
Confidence 1 11222222111112335889999999998 8888999999 555443221
Q ss_pred ceeE---EecCCceeEEEEEEEeecCCCCCeEEEEEEE
Q psy16426 102 KYEP---ILLDNAYKIHMKLTIKAVTKQDFGAYKCVSK 136 (194)
Q Consensus 102 ~~~~---~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~ 136 (194)
.... ...+..+...+.|.|.++..+|.|.|+|.|.
T Consensus 161 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 161 ENSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp EEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred ecccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 0100 1122344556789999999999999999999
No 103
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.59 E-value=1.5e-14 Score=106.21 Aligned_cols=135 Identities=15% Similarity=0.235 Sum_probs=84.6
Q ss_pred CeEEEcCCeeeeeCCCcEEEEeeeecc-CCceeEEEecC---c--------------------------------eEE--
Q psy16426 10 PMIWIQNQLVGAMEGDQMTLECHSEAY-PKSINYWTKEN---G--------------------------------EII-- 51 (194)
Q Consensus 10 P~~~~~~~~~~v~~G~~v~L~C~~~g~-p~~~v~W~k~~---~--------------------------------~l~-- 51 (194)
|.++..+ ++.+.+|++++|.|.+.+. +.+.+.||+.+ . .|.
T Consensus 2 ~~v~~~p-~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 80 (218)
T 3s96_B 2 LVLTQSS-SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSIS 80 (218)
T ss_dssp CSEECCS-EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEES
T ss_pred CeEEeCC-cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEc
Confidence 5667677 7889999999999999998 88999999821 0 011
Q ss_pred -------------Ee------------------------eCCeEEeccceeEEeeCCeEEEEEEeec-cCCC-ccEEEec
Q psy16426 52 -------------AQ------------------------VPPMIWIQNQLVGAMEGDQMTLECHSEA-YPKS-INYWTKE 92 (194)
Q Consensus 52 -------------v~------------------------~~p~i~~~~~~~~~~~g~~~~l~C~~~~-~p~p-~v~W~~~ 92 (194)
+. .+|.+...........|+.+.|.|.+.+ .|.+ .+.|++
T Consensus 81 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~~v~W~k- 159 (218)
T 3s96_B 81 NIQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPSSEELKENKATLVCLISNFSPSGVTVAWKA- 159 (218)
T ss_dssp SCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEE-
T ss_pred cCCcccCEEEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCCCcccccCCcEEEEEEECcccCCCeEEEEEE-
Confidence 10 1111111111111235678999999988 4556 789999
Q ss_pred CcEEeeCCCc-eeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEEE
Q psy16426 93 NGEIIAQGSK-YEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSI 146 (194)
Q Consensus 93 ~~~~~~~~~~-~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~ 146 (194)
++..+..... ......++.+...+.|.|.....+|.|.|+|.|.|..+....++
T Consensus 160 ~g~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~ 214 (218)
T 3s96_B 160 NGTPITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVEKSL 214 (218)
T ss_dssp TTEEC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEEEEE
T ss_pred CCEECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCcccccc
Confidence 5554433211 11111233444456788998888899999999999987655443
No 104
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.59 E-value=5e-14 Score=102.97 Aligned_cols=134 Identities=16% Similarity=0.194 Sum_probs=85.4
Q ss_pred eeeeeCCCcEEEEeeeeccCCc---eeEEEecCceEE-------------------------------------------
Q psy16426 18 LVGAMEGDQMTLECHSEAYPKS---INYWTKENGEII------------------------------------------- 51 (194)
Q Consensus 18 ~~~v~~G~~v~L~C~~~g~p~~---~v~W~k~~~~l~------------------------------------------- 51 (194)
.+.+.+|++|+|.|.+.+.+.+ .|.|+|+++.+.
T Consensus 10 ~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~ 89 (225)
T 4fmk_A 10 EVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFRG 89 (225)
T ss_dssp EEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEECS
T ss_pred EEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEcc
Confidence 3567889999999999887655 488999764321
Q ss_pred ----------------------------EeeCCeEEeccceeEEeeCCeEEEEEE-eeccCCCccEEEecCcEEeeCCCc
Q psy16426 52 ----------------------------AQVPPMIWIQNQLVGAMEGDQMTLECH-SEAYPKSINYWTKENGEIIAQGSK 102 (194)
Q Consensus 52 ----------------------------v~~~p~i~~~~~~~~~~~g~~~~l~C~-~~~~p~p~v~W~~~~~~~~~~~~~ 102 (194)
+..+|.+...........+....+.|. ..+.|++.+.|+.+++...... .
T Consensus 90 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~~~~~~-~ 168 (225)
T 4fmk_A 90 LRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWISSLGGEAKDT-Q 168 (225)
T ss_dssp CCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEEECSSCCEEEEE-E
T ss_pred CCHHHCcceEEEEEeCCCcceeeeeeeeeecCCceeecccceeecceeeeeeeeeecCCCCCCEEEEEECCccccCCc-c
Confidence 222333322222233345566666665 4556777888988544433221 1
Q ss_pred eeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceE--EEEEEEcccC
Q psy16426 103 YEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTD--GSIKLYGKKK 153 (194)
Q Consensus 103 ~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~--~~~~l~v~~~ 153 (194)
.....++.+...+.|.|.++..+|.|.|+|.|.|..+... .++.|.|..+
T Consensus 169 -~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v~l~V~Y~ 220 (225)
T 4fmk_A 169 -EPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVTLSVRYH 220 (225)
T ss_dssp -EECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCBTTC
T ss_pred -eEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEEEEEEEEC
Confidence 1122333445567899999999999999999999887654 4556655543
No 105
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.58 E-value=1.8e-14 Score=93.81 Aligned_cols=95 Identities=19% Similarity=0.218 Sum_probs=76.1
Q ss_pred eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEE
Q psy16426 54 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKC 133 (194)
Q Consensus 54 ~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C 133 (194)
.+|.+...+....+.+|+.+.|.|.+.+.|.|.+.|++ ++..+....++....... ..+|.|.++..+|.|.|+|
T Consensus 7 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k-~~~~~~~~~~~~~~~~~~----~~~L~i~~~~~~D~G~Y~C 81 (103)
T 3qp3_A 7 HAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYH-NGVELQESSKIHYTNTSG----VLTLEILDCHTDDSGTYRA 81 (103)
T ss_dssp EEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEE-TTEECCCCSSEEEEEETT----EEEEEECSCCGGGCEEEEE
T ss_pred CCCEEEeCCcceEEeCCCeEEEEEEEEecCCCEEEEEE-CCEECCCCCCEEEEECCC----EEEEEEcCCCcccCEEEEE
Confidence 46677777777888999999999999999999999999 555555544544322222 4589999999999999999
Q ss_pred EEEcCCCceEEEEEEEcccC
Q psy16426 134 VSKNSLGDTDGSIKLYGKKK 153 (194)
Q Consensus 134 ~a~n~~g~~~~~~~l~v~~~ 153 (194)
.|.|..|...+.+.|.|...
T Consensus 82 ~a~N~~G~~~~~~~l~V~~~ 101 (103)
T 3qp3_A 82 VCTNYKGEASDYATLDVTGG 101 (103)
T ss_dssp EEEETTEEEEEEEEEEEECC
T ss_pred EEEeCCCcEEEEEEEEEECC
Confidence 99999999988888887654
No 106
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.58 E-value=9.3e-15 Score=94.67 Aligned_cols=96 Identities=23% Similarity=0.330 Sum_probs=74.0
Q ss_pred eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEE
Q psy16426 54 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKC 133 (194)
Q Consensus 54 ~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C 133 (194)
.+|.+...+....+.+|+.+.|.|.+.+.|.|.+.|++ ++..+.............. ..+|.|.++..+|.|.|+|
T Consensus 4 ~~P~~~~~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~-~g~~~~~~~~~~~~~~~~~---~~~L~i~~v~~~D~G~Y~C 79 (100)
T 2kdg_A 4 GPPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYL-NGRTVQSDDLHKMIVSEKG---LHSLIFEVVRASDAGAYAC 79 (100)
T ss_dssp EEEECCCCCCCEEEETTCCEEEEEECEEESCCEEEEEE-TTEEECCCSSSCEEEETTT---EEEEEESSCCGGGCEEEEE
T ss_pred CCCeEEeCCCCEEecCCCEEEEEEEEEeeCCCEEEEEE-CCEECcCCCcEEEEEcCCC---eEEEEECCCCcccCEEEEE
Confidence 45666656667778999999999999999999999999 5555444333222222222 3589999999999999999
Q ss_pred EEEcCCCceEEEEEEEcccC
Q psy16426 134 VSKNSLGDTDGSIKLYGKKK 153 (194)
Q Consensus 134 ~a~n~~g~~~~~~~l~v~~~ 153 (194)
.+.|..|.....+.|.|...
T Consensus 80 ~a~n~~g~~~~~~~l~V~~~ 99 (100)
T 2kdg_A 80 VAKNRAGEATFTVQLDVLAK 99 (100)
T ss_dssp EEEETTEEEEEEEEEEEECC
T ss_pred EEEcCCCeEEEEEEEEEEec
Confidence 99999999888888887654
No 107
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.58 E-value=7.4e-15 Score=111.08 Aligned_cols=149 Identities=13% Similarity=0.234 Sum_probs=93.4
Q ss_pred cCCeEEEcCCeeeeeCCCcEEEEeeee---ccCCceeEEEecCce-----------------------------------
Q psy16426 8 VPPMIWIQNQLVGAMEGDQMTLECHSE---AYPKSINYWTKENGE----------------------------------- 49 (194)
Q Consensus 8 ~~P~~~~~~~~~~v~~G~~v~L~C~~~---g~p~~~v~W~k~~~~----------------------------------- 49 (194)
..+.+...+.++.+.+|++++|.|.+. +.+.+.+.|++++..
T Consensus 4 g~~~v~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 83 (268)
T 3mj6_A 4 GLPGLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHND 83 (268)
T ss_dssp --------CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTB
T ss_pred cccccccCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCE
Confidence 346677778888999999999999987 677889999996431
Q ss_pred --EE---------------EeeC---------CeEEe---ccceeEEeeCCeEEEEEEe---eccCCCccEEEecCcEEe
Q psy16426 50 --II---------------AQVP---------PMIWI---QNQLVGAMEGDQMTLECHS---EAYPKSINYWTKENGEII 97 (194)
Q Consensus 50 --l~---------------v~~~---------p~i~~---~~~~~~~~~g~~~~l~C~~---~~~p~p~v~W~~~~~~~~ 97 (194)
|. +... ..+.+ .+....+.+|+.+.|.|.+ .+.|.+.+.|+++++...
T Consensus 84 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~~ 163 (268)
T 3mj6_A 84 GSLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLPEEPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHT 163 (268)
T ss_dssp CCEEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEECCCCSEEEEETTCCEEECCBCEESSSSCCCEEEEEEECTTCS
T ss_pred EEEEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEeccCCCccccccCCcEEEEEEecCCCCCCccceEEEecCCCCC
Confidence 11 1100 01111 2344567889999999999 566888999998443211
Q ss_pred eC-----------------CCce--eEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEcccCCCC
Q psy16426 98 AQ-----------------GSKY--EPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGKKKKKK 156 (194)
Q Consensus 98 ~~-----------------~~~~--~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~p~~ 156 (194)
.. ..++ ............++|.|.++..+|.|.|+|.|.|..|.....+.|.|...++.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~p~ 241 (268)
T 3mj6_A 164 EEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQDEFQ 241 (268)
T ss_dssp SCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC---
T ss_pred cceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEEEEEEEEcCCCe
Confidence 10 0000 00000000112458999999999999999999999998888888888554443
No 108
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.58 E-value=4.9e-14 Score=105.61 Aligned_cols=140 Identities=14% Similarity=0.189 Sum_probs=85.4
Q ss_pred CeEEE-cCCeeeeeCCCcEEEEeeeeccCCce-----eEEEecCce----------------------------------
Q psy16426 10 PMIWI-QNQLVGAMEGDQMTLECHSEAYPKSI-----NYWTKENGE---------------------------------- 49 (194)
Q Consensus 10 P~~~~-~~~~~~v~~G~~v~L~C~~~g~p~~~-----v~W~k~~~~---------------------------------- 49 (194)
|.+.+ .+..+.+.+|++++|.|.+.+.|.+. +.|++++..
T Consensus 3 ~~v~v~~p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (248)
T 3pv7_A 3 LKVEMMAGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDA 82 (248)
T ss_dssp EEEECSTTSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBC
T ss_pred eEEEEeCCCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcE
Confidence 44443 34566889999999999999887765 999995210
Q ss_pred -EE------------------------------EeeCCeEEeccceeEEeeCCeEEEEEEeec-cCCC-ccEEEecCcEE
Q psy16426 50 -II------------------------------AQVPPMIWIQNQLVGAMEGDQMTLECHSEA-YPKS-INYWTKENGEI 96 (194)
Q Consensus 50 -l~------------------------------v~~~p~i~~~~~~~~~~~g~~~~l~C~~~~-~p~p-~v~W~~~~~~~ 96 (194)
|. |..+|.+...+.. ....|..+.|.|.+.+ .|.| .+.|++++..+
T Consensus 83 sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~P~v~~~~~~-~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~~l 161 (248)
T 3pv7_A 83 SLRLPGIQLEEAGEYRCEVVVTPLKAQGTVQLEVVASPASRLLLDQ-VGMKENEDKYMCESSGFYPEAINITWEKQTQKF 161 (248)
T ss_dssp CEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCEEEEECC---------CEEEEEEEEEBSSCCEEEEEEECSSS
T ss_pred EEEeCCCCHHHCeEEEEEEEeCCccceeEEEEEEecCCceEEecCC-ccccCCCcEEEEEEccEECCCeEEEEEECCccC
Confidence 11 4445555544332 2345777889999998 7888 89999954321
Q ss_pred -----eeCCCce-e-EEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCce--EEEEEEEc
Q psy16426 97 -----IAQGSKY-E-PILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDT--DGSIKLYG 150 (194)
Q Consensus 97 -----~~~~~~~-~-~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~--~~~~~l~v 150 (194)
....... . ....+..+...+.|.|.....+|.|.|+|.+.|..+.. ...+.|.|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~l~V 224 (248)
T 3pv7_A 162 PHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTLTA 224 (248)
T ss_dssp CSCEEECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEECC--
T ss_pred CCccccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEEEEEE
Confidence 1111000 1 11233345556789999999999999999999998864 44566666
No 109
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.58 E-value=8.1e-15 Score=96.78 Aligned_cols=101 Identities=22% Similarity=0.307 Sum_probs=78.2
Q ss_pred eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEee-CCCceeEEecCCceeEEEEEEEeecCCCCCeEEE
Q psy16426 54 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIA-QGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYK 132 (194)
Q Consensus 54 ~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~-~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~ 132 (194)
.+|.+...+....+.+|+.+.|.|.+.+.|.|.+.|++ ++..+. ...++........ ...|.|.++..+|.|.|+
T Consensus 7 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k-~g~~~~~~~~~~~~~~~~~~---~~~L~i~~v~~~D~G~Y~ 82 (110)
T 2dm2_A 7 GAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFK-DGKQISPKSDHYTIQRDLDG---TCSLHTTASTLDDDGNYT 82 (110)
T ss_dssp CCCCBSSCCCCEEEETTCCEEEEEEBCCSSCCEEEEEC-SSCBCCTTCSSEEEEECTTC---EEEEEESSCCTTTCSCCE
T ss_pred CCCEEEecCcCeEEeCCCeEEEEEEEEecCCCEEEEEE-CCEECCCCCCeEEEEECCCc---EEEEEECCCChhhCEEEE
Confidence 35666656667778999999999999999999999999 444443 2344433222121 358999999999999999
Q ss_pred EEEEcCCCceEEEEEEEcccCCCCCh
Q psy16426 133 CVSKNSLGDTDGSIKLYGKKKKKKKK 158 (194)
Q Consensus 133 C~a~n~~g~~~~~~~l~v~~~p~~p~ 158 (194)
|.+.|..|.....+.|.|...|..|+
T Consensus 83 C~a~N~~g~~~~~~~l~V~~~~~~P~ 108 (110)
T 2dm2_A 83 IMAANPQGRISCTGRLMVQAVNSGPS 108 (110)
T ss_dssp EEEECTTCCEEECCCEEEECCSCCSS
T ss_pred EEEEECCCeEEEEEEEEEECCCCCCC
Confidence 99999999998888898888877664
No 110
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.58 E-value=4e-14 Score=119.74 Aligned_cols=125 Identities=22% Similarity=0.323 Sum_probs=95.7
Q ss_pred CCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceEE-------------------------------------
Q psy16426 9 PPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEII------------------------------------- 51 (194)
Q Consensus 9 ~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~------------------------------------- 51 (194)
+|.+.. ..+..+.+|++++|.|.+.+ |.+.+.|++++..+.
T Consensus 468 ~p~i~~-~~~~~v~~g~~v~l~C~~~~-~~~~i~W~~~g~~l~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 545 (642)
T 1e07_A 468 KPSISS-NNSKPVEDKDAVAFTCEPEA-QNTTYLWWVNGQSLPVSPRLQLSNGNRTLTLFNVTRNDARAYVCGIQNSVSA 545 (642)
T ss_pred CceEec-CCceeecCCCeEEEEEECCC-CCcEEEEEECCEeCCCCCcEEEcCCCcEEEEeecChhcCceEEEEeEcCCCC
Confidence 555543 34567889999999999995 788999999875432
Q ss_pred ---------EeeCC-eEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEe
Q psy16426 52 ---------AQVPP-MIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIK 121 (194)
Q Consensus 52 ---------v~~~p-~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~ 121 (194)
|..+| .+...+....+..|+.+.|.|.+.|.|.|.+.|++ ++..+.. ...|.|.
T Consensus 546 ~~s~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~-~g~~i~~---------------~~~L~i~ 609 (642)
T 1e07_A 546 NRSDPVTLDVLYGPDTPIISPPDSSYLSGANLNLSCHSASNPSPQYSWRI-NGIPQQH---------------TQVLFIA 609 (642)
T ss_pred ccCCCEEEEEEeCCCcceecCCceeEEcCCcEEEEEEeccCCCCeEEEEE-CCEECcc---------------CceEEEC
Confidence 22222 33344455667889999999999999999999999 5544321 1378999
Q ss_pred ecCCCCCeEEEEEEEcCCCceEEEEEEEcc
Q psy16426 122 AVTKQDFGAYKCVSKNSLGDTDGSIKLYGK 151 (194)
Q Consensus 122 ~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~ 151 (194)
++..+|.|.|+|.|.|..|....+..|.|.
T Consensus 610 ~~~~~d~G~Y~C~a~N~~G~~~~s~~l~V~ 639 (642)
T 1e07_A 610 KITPNNNGTYACFVSNLATGRNNSIVKSIT 639 (642)
T ss_pred cccccCCeEEEEEEEecccCcceeEEEEEE
Confidence 999999999999999999998887777654
No 111
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.58 E-value=3.3e-14 Score=91.85 Aligned_cols=94 Identities=20% Similarity=0.215 Sum_probs=73.8
Q ss_pred eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEE
Q psy16426 54 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKC 133 (194)
Q Consensus 54 ~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C 133 (194)
.+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+....+......... ..+|.|.++..+|.|.|+|
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k-~g~~~~~~~~~~~~~~~~~---~~~L~i~~v~~~D~G~Y~C 79 (99)
T 1g1c_A 4 EAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYK-NGVKIERSDRIYWYWPEDN---VCELVIRDVTGEDSASIMV 79 (99)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEE-TTEECCCCSSEEEEEEETT---EEEEEECSCCGGGCEEEEE
T ss_pred CCCceEecCcceEEcCCCcEEEEEEEEEeCCCEEEEEE-CCEECCCCCCEEEEEcCCC---EEEEEECCCCcCCCEEEEE
Confidence 35667667777888999999999999999999999999 5555544444332221221 4589999999999999999
Q ss_pred EEEcCCCceEEEEEEEcc
Q psy16426 134 VSKNSLGDTDGSIKLYGK 151 (194)
Q Consensus 134 ~a~n~~g~~~~~~~l~v~ 151 (194)
.|.|..|...+.+.|.|.
T Consensus 80 ~a~N~~g~~~~~~~l~V~ 97 (99)
T 1g1c_A 80 KAINIAGETSSHAFLLVQ 97 (99)
T ss_dssp EEEETTEEEEEEEEEEEE
T ss_pred EEEECCCcEEEEEEEEEe
Confidence 999999999888888774
No 112
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.58 E-value=4.1e-15 Score=116.26 Aligned_cols=141 Identities=18% Similarity=0.202 Sum_probs=99.6
Q ss_pred cccCCeEEEcCCeeeeeCCCcEEEEeeee-------ccCCceeEEEecCceEE---------------------------
Q psy16426 6 QNVPPMIWIQNQLVGAMEGDQMTLECHSE-------AYPKSINYWTKENGEII--------------------------- 51 (194)
Q Consensus 6 v~~~P~~~~~~~~~~v~~G~~v~L~C~~~-------g~p~~~v~W~k~~~~l~--------------------------- 51 (194)
....|.+...+.++.+.+|+++.|.|.+. +.|.+.|.|++++..+.
T Consensus 15 ~~~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G 94 (339)
T 3o4o_C 15 ARSCRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQDGALWLLPALQEDSG 94 (339)
T ss_dssp ---CEEEEECSCCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEEEETTEEEESSBCTTCCE
T ss_pred chhhHhhCcCceEEEEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEEeeCCeEEECCCCcccCE
Confidence 34568899999999999999999999998 88899999999876521
Q ss_pred --------------------EeeCCeEE--eccceeEEeeCCeEEEEEE-----eeccCCCccEEEecCcEEeeCC-Cce
Q psy16426 52 --------------------AQVPPMIW--IQNQLVGAMEGDQMTLECH-----SEAYPKSINYWTKENGEIIAQG-SKY 103 (194)
Q Consensus 52 --------------------v~~~p~i~--~~~~~~~~~~g~~~~l~C~-----~~~~p~p~v~W~~~~~~~~~~~-~~~ 103 (194)
|..++... .......+.+|+.+.|.|. +.+.|.+.+.|++ ++..+... .++
T Consensus 95 ~Y~C~~~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k-~g~~~~~~~~~~ 173 (339)
T 3o4o_C 95 TYVCTTRNASYCDKMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYK-DSLLLDKDNEKF 173 (339)
T ss_dssp EEECCEEETTEEEEEEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEE-SSCBCCTTCSSE
T ss_pred EEEEEEECCcceEEEEEEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEec-CCeeCCCCCcee
Confidence 11111100 0112234678999999999 7888899999999 44444333 233
Q ss_pred eEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCc----eEEEEEEEcccC
Q psy16426 104 EPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGD----TDGSIKLYGKKK 153 (194)
Q Consensus 104 ~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~----~~~~~~l~v~~~ 153 (194)
. ...+ .+.|.|.++..+|.|.|+|.+.|..|. ....+.|.|...
T Consensus 174 ~--~~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~ 221 (339)
T 3o4o_C 174 L--SVRG----TTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKK 221 (339)
T ss_dssp E--ECTT----SSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECC
T ss_pred E--EcCC----cceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcC
Confidence 2 2222 138999999999999999999998874 455677776543
No 113
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.57 E-value=2.7e-14 Score=93.43 Aligned_cols=99 Identities=19% Similarity=0.244 Sum_probs=72.9
Q ss_pred eeCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeE-EecCCceeEEEEEEEeecCCCCCeEE
Q psy16426 53 QVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEP-ILLDNAYKIHMKLTIKAVTKQDFGAY 131 (194)
Q Consensus 53 ~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~-~~~~~~~~~~~~L~i~~~~~~d~g~y 131 (194)
.+||.|.... ....+..+.|.|.+.|.|.|.+.|++ ++..+........ ....+.....++|.|.++..+|.|.|
T Consensus 2 ~~pP~i~~~~---~~~~~~~~~~~c~v~G~P~P~i~W~k-~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 77 (103)
T 1wwb_X 2 HFAPTITFLE---SPTSDHHWCIPFTVKGNPKPALQWFY-NGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDY 77 (103)
T ss_dssp CCCCCCCCCC---CCCCCCEEEEEEEEECSSCCEEEEEE-TTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEE
T ss_pred CCCCEEEecc---CceECcEEEEEEEEEEeCCCEEEEEE-CCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEE
Confidence 4566653211 12457789999999999999999999 5665554433211 11122233456799999999999999
Q ss_pred EEEEEcCCCceEEEEEEEcccCCC
Q psy16426 132 KCVSKNSLGDTDGSIKLYGKKKKK 155 (194)
Q Consensus 132 ~C~a~n~~g~~~~~~~l~v~~~p~ 155 (194)
+|.|.|..|...+++.|.|...|.
T Consensus 78 ~C~A~N~~G~~~~~~~l~V~~~P~ 101 (103)
T 1wwb_X 78 TLIAKNEYGKDEKQISAHFMGWPG 101 (103)
T ss_dssp EEEEECSSCEEEEEEEECCSCCCC
T ss_pred EEEEEeCCCcEeEEEEEEECCCCC
Confidence 999999999999999999987765
No 114
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.57 E-value=5.7e-14 Score=102.76 Aligned_cols=133 Identities=16% Similarity=0.281 Sum_probs=87.0
Q ss_pred eEEEcCCeeeeeCCCcEEEEeeeeccC---CceeEEEecC--ce-----------------------------EE-----
Q psy16426 11 MIWIQNQLVGAMEGDQMTLECHSEAYP---KSINYWTKEN--GE-----------------------------II----- 51 (194)
Q Consensus 11 ~~~~~~~~~~v~~G~~v~L~C~~~g~p---~~~v~W~k~~--~~-----------------------------l~----- 51 (194)
.+.. +.++.+.+|++++|.|.+.+.+ .+.+.||+++ .. |.
T Consensus 3 ~v~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 81 (212)
T 1q0x_L 3 VVTQ-ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQ 81 (212)
T ss_dssp CEEE-CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred eEEC-CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCC
Confidence 3555 7788899999999999999876 4789999853 11 11
Q ss_pred --------------------------Ee----eCCeEEeccceeEEeeCCeEEEEEEeeccCCC--ccEEEecCcEEeeC
Q psy16426 52 --------------------------AQ----VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKS--INYWTKENGEIIAQ 99 (194)
Q Consensus 52 --------------------------v~----~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p--~v~W~~~~~~~~~~ 99 (194)
|. .+|.+...........|+.+.|.|.+.+.+++ .+.|++ ++..+..
T Consensus 82 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k-~g~~l~~ 160 (212)
T 1q0x_L 82 TEDEAIYFCALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKV-DGTPVTA 160 (212)
T ss_dssp GGGCEEEEEEEECSSCEEECCCEEEEECCSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEE-TTEEECT
T ss_pred ccCCEEEEEEEecCchhhcCCCeEEEEecCCCCCCeeEEeCCCHHHccCCcEEEEEEEEEEeCCCeEEEEEE-CCEeCCC
Confidence 10 12222221111112358899999999986544 789999 5655543
Q ss_pred CCcee--EEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEE
Q psy16426 100 GSKYE--PILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGS 145 (194)
Q Consensus 100 ~~~~~--~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~ 145 (194)
..... ....++.+...+.|.|.....+|.|.|+|.+.|.......+
T Consensus 161 ~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 208 (212)
T 1q0x_L 161 GMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHSSNKT 208 (212)
T ss_dssp TEEECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEEEEEE
T ss_pred CeecCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCcceeee
Confidence 31110 11223345556789999998899999999999986554433
No 115
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.57 E-value=5.1e-15 Score=97.63 Aligned_cols=101 Identities=22% Similarity=0.367 Sum_probs=79.8
Q ss_pred eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEE
Q psy16426 54 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKC 133 (194)
Q Consensus 54 ~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C 133 (194)
.+|.+...+..+.+.+|+.+.|.|.+.+.|.+.+.|++ ++..+.............. ..+|.|.++..+|.|.|+|
T Consensus 8 ~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~-~g~~~~~~~~~~~~~~~~~---~~~L~i~~v~~~D~G~Y~C 83 (110)
T 2dm3_A 8 FRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQL-DGKPVRPDSAHKMLVRENG---VHSLIIEPVTSRDAGIYTC 83 (110)
T ss_dssp CCCEEEECCCEEEEESSSCBCCEEEEECSSCCEEECBB-SSSBCCCCSSEEEEECTTS---CEEEEESSCCGGGCSBBCE
T ss_pred CCCcEEeCCCcEEEeCCCEEEEEEEEEEcCCCEEEEEE-CCEECCCCCceEEEEecCC---eEEEEEeeCCcccCEEEEE
Confidence 47788877788889999999999999999999999999 4444333333322222221 3589999999999999999
Q ss_pred EEEcCCCceEEEEEEEcccCCCCCh
Q psy16426 134 VSKNSLGDTDGSIKLYGKKKKKKKK 158 (194)
Q Consensus 134 ~a~n~~g~~~~~~~l~v~~~p~~p~ 158 (194)
.+.|..|.....+.|.|...|..|.
T Consensus 84 ~a~n~~g~~~~~~~l~V~~~p~~P~ 108 (110)
T 2dm3_A 84 IATNRAGQNSFSLELVVAAKESGPS 108 (110)
T ss_dssp EEECSSCEEEECCEEEEECCCCSSS
T ss_pred EEECCCCEEEEEEEEEEeCCCCCCC
Confidence 9999999988889999988877664
No 116
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.57 E-value=6.7e-15 Score=108.76 Aligned_cols=135 Identities=18% Similarity=0.243 Sum_probs=85.9
Q ss_pred ccCCeEEEcCCeee--eeCCCcEEEEeeeecc---CC-ceeEEEecCceEE-----------------------------
Q psy16426 7 NVPPMIWIQNQLVG--AMEGDQMTLECHSEAY---PK-SINYWTKENGEII----------------------------- 51 (194)
Q Consensus 7 ~~~P~~~~~~~~~~--v~~G~~v~L~C~~~g~---p~-~~v~W~k~~~~l~----------------------------- 51 (194)
..+|.+.+.+.... +.+|++++|.|.+.|. |. +.|.|++++..+.
T Consensus 7 ~~~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~ 86 (218)
T 2rgs_A 7 EGGPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWM 86 (218)
T ss_dssp --CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHH
T ss_pred CCCCEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcC
Confidence 56788877765554 7899999999999887 33 7899999875421
Q ss_pred --------E-------------------eeCCeEEeccceeEEeeCCeEEEEEEeec-cCCC-ccEEEecCcEEeeCCCc
Q psy16426 52 --------A-------------------QVPPMIWIQNQLVGAMEGDQMTLECHSEA-YPKS-INYWTKENGEIIAQGSK 102 (194)
Q Consensus 52 --------v-------------------~~~p~i~~~~~~~~~~~g~~~~l~C~~~~-~p~p-~v~W~~~~~~~~~~~~~ 102 (194)
+ ..+|.+.+.+.......|+.+.|.|.+.| +|.+ .+.|++ ++........
T Consensus 87 D~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k-~g~~~~~~~~ 165 (218)
T 2rgs_A 87 SGKEFKCKVNNKDLPSPIERTISKIKGLVRAPQVYILPPPAEQLSRKDVSLTCLVVGFNPGDISVEWTS-NGHTEENYKD 165 (218)
T ss_dssp TTCCEEEEEEETTCSSCEEEEECCCCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEE-TTEEECCEEE
T ss_pred CCCeEEEEEECCcCCCcceEEEeecCCCCCCCEEEEECCChHHhcCCceEEEEEEEeeeCCCcEEEEEE-CCEeccCcee
Confidence 1 11222222211111124889999999998 5655 799999 4544332111
Q ss_pred eeE-EecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCce
Q psy16426 103 YEP-ILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDT 142 (194)
Q Consensus 103 ~~~-~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~ 142 (194)
... ...++.+...+.|.|......|.|.|+|.+.|.....
T Consensus 166 ~~~~~~~~gt~~~~s~l~v~~~~~~d~g~YtC~a~n~~l~~ 206 (218)
T 2rgs_A 166 TAPVLDSDGSYFIYSKLNMKTSKWEKTDSFSCNVRHEGLKN 206 (218)
T ss_dssp CCCEECTTSCEEEEEEEEEEHHHHHHCSCEEEEEECTTSGG
T ss_pred cccEECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCCC
Confidence 111 1334445666677777766667899999999986543
No 117
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.57 E-value=2.6e-14 Score=100.14 Aligned_cols=102 Identities=23% Similarity=0.368 Sum_probs=78.3
Q ss_pred EeeCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEE
Q psy16426 52 AQVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAY 131 (194)
Q Consensus 52 v~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y 131 (194)
+..+|.+...+....+..|+.+.|.|.+.+.|.|.+.|++ ++..+....++....... ....|.|.++...|.|.|
T Consensus 38 v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k-~g~~~~~~~~~~~~~~~~---~~~~L~I~~v~~~D~G~Y 113 (154)
T 1fhg_A 38 PHVKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFK-DDNPVKESRHFQIDYDEE---GNCSLTISEVCGDDDAKY 113 (154)
T ss_dssp CCEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEE-TTEECCCSSSEEEEECTT---CEEEEEESSCCGGGCEEE
T ss_pred CCCCCeEEccCCcEEEeCCCeEEEEEEEEEecCCEEEEEE-CCEECCCCCcEEEEECCC---CeEEEEECCCChhcCEEE
Confidence 4457777777777888999999999999999999999999 555555444544322222 146999999999999999
Q ss_pred EEEEEcCCCceEEEEEEEcccCCCCC
Q psy16426 132 KCVSKNSLGDTDGSIKLYGKKKKKKK 157 (194)
Q Consensus 132 ~C~a~n~~g~~~~~~~l~v~~~p~~p 157 (194)
+|.+.|..|.....+.|.|...|...
T Consensus 114 ~C~a~N~~G~~~~~~~l~V~~~p~~~ 139 (154)
T 1fhg_A 114 TCKAVNSLGEATCTAELLVETMGKEG 139 (154)
T ss_dssp EEEEEETTEEEEEEEEEEEECC----
T ss_pred EEEEEECCCeEEEEEEEEEeCcCcCC
Confidence 99999999998888888887665543
No 118
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.57 E-value=2.4e-14 Score=95.69 Aligned_cols=100 Identities=26% Similarity=0.404 Sum_probs=77.8
Q ss_pred eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEee-CCCceeEEecCCceeEEEEEEEeecCCCCCeEEE
Q psy16426 54 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIA-QGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYK 132 (194)
Q Consensus 54 ~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~-~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~ 132 (194)
.+|.|...+....+.+|+.+.|.|.+.+.|.|.+.|++ ++.... ...++....... ..++|.|.++..+|.|.|+
T Consensus 14 ~~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k-~~~~~~~~~~~~~~~~~~~---~~~~L~I~~v~~~D~G~Y~ 89 (116)
T 2kkq_A 14 RAPMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKR-NNEMVQFNTDRISLYQDNT---GRVTLLIKDVNKKDAGWYT 89 (116)
T ss_dssp BCCCBSSCCCCEEEETTEEEEEEEEBCCBSCCEEEEEE-TTEECCCCBTTEEEEECTT---CEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEeCCCcEEEeCCCcEEEEEEEeccCCCEEEEEE-CCEECcCCCCeEEEEeCCC---CeEEEEECCCCcccCEEEE
Confidence 46667667777889999999999999999999999999 454443 233443222221 2458999999999999999
Q ss_pred EEEEcCCCceEEEEEEEcccCCCCC
Q psy16426 133 CVSKNSLGDTDGSIKLYGKKKKKKK 157 (194)
Q Consensus 133 C~a~n~~g~~~~~~~l~v~~~p~~p 157 (194)
|.+.|..|.....+.|.|...|..+
T Consensus 90 C~a~N~~G~~~~~~~l~V~~~p~~~ 114 (116)
T 2kkq_A 90 VSAVNEAGVTTCNTRLDVTARPNQT 114 (116)
T ss_dssp EEEEETTEEEEEEEEEEEECCSCCC
T ss_pred EEEEcCCCeEEEEEEEEEeCCCCCC
Confidence 9999999999888999888776544
No 119
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.57 E-value=2.5e-14 Score=107.54 Aligned_cols=135 Identities=13% Similarity=0.234 Sum_probs=88.8
Q ss_pred ccCCeEEEcCCeeeeeCCCcEEEEeeeeccC-----CceeEEEecC--c-----------------------------eE
Q psy16426 7 NVPPMIWIQNQLVGAMEGDQMTLECHSEAYP-----KSINYWTKEN--G-----------------------------EI 50 (194)
Q Consensus 7 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p-----~~~v~W~k~~--~-----------------------------~l 50 (194)
..+|.+...+..+.+.+|++++|.|.+.+.+ .+.+.|++++ . .|
T Consensus 36 ~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L 115 (254)
T 2c1o_A 36 LRELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTL 115 (254)
T ss_dssp --CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEE
T ss_pred eeceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCceEEEEeccccCCCccceEEEecCCCEEEE
Confidence 3467788888889999999999999999887 3899999743 1 11
Q ss_pred E-------------------------------Ee---eCCeEEeccceeEEeeCCeEEEEEEeeccCCC--ccEEEecCc
Q psy16426 51 I-------------------------------AQ---VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKS--INYWTKENG 94 (194)
Q Consensus 51 ~-------------------------------v~---~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p--~v~W~~~~~ 94 (194)
. |. .+|.+...........|..+.|.|.+.+.+++ .+.|++ ++
T Consensus 116 ~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k-~g 194 (254)
T 2c1o_A 116 KISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKI-DG 194 (254)
T ss_dssp EESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEE-SS
T ss_pred EECcCCcccCEEEEEEEEcCcceEecCCEEEEECCCCCCCeeEeecCChhhccCCcEEEEEEEecccCCCcEEEEEE-CC
Confidence 1 11 12333322221112357799999999885443 488999 44
Q ss_pred EEeeCC--CceeEE-ecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCce
Q psy16426 95 EIIAQG--SKYEPI-LLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDT 142 (194)
Q Consensus 95 ~~~~~~--~~~~~~-~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~ 142 (194)
..+... ...... ..++.+...+.|.|.++..+|.|.|+|.|.|.....
T Consensus 195 ~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 245 (254)
T 2c1o_A 195 SERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 245 (254)
T ss_dssp SEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred CcccCcceeccccccCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCCCC
Confidence 444332 111101 122334456799999999999999999999987654
No 120
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.57 E-value=2.3e-14 Score=113.21 Aligned_cols=129 Identities=14% Similarity=0.118 Sum_probs=90.4
Q ss_pred eeeeCCCcEEEEeeeeccCCceeEEEecCceEE-------------------------------------EeeCCeEEec
Q psy16426 19 VGAMEGDQMTLECHSEAYPKSINYWTKENGEII-------------------------------------AQVPPMIWIQ 61 (194)
Q Consensus 19 ~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~-------------------------------------v~~~p~i~~~ 61 (194)
..+.+|++++|.|.+.+.|.+.+.|+++++.+. |..+|. .
T Consensus 106 ~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~~p~---~ 182 (363)
T 1wio_A 106 THLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQK---A 182 (363)
T ss_dssp SSEESBSCEEEEEECCTTCCCCEEEECSSSCEEEESSEEEECSBCGGGCEECEEEEEETTEEEEECCEECEECCSC---S
T ss_pred eEEecCCCEEEEEEcCCCCCCeEEEEcCCCcccccceEEEEeeCChhcCCEEEEEEecCCCeEEEEEEEEEecCCC---C
Confidence 467899999999999999999999999876543 111111 1
Q ss_pred cceeEEeeCCeEEEEEEeec-----cCCCccEEEecCcEEeeC--------CCceeEEecC--C----ceeEEEEEEEee
Q psy16426 62 NQLVGAMEGDQMTLECHSEA-----YPKSINYWTKENGEIIAQ--------GSKYEPILLD--N----AYKIHMKLTIKA 122 (194)
Q Consensus 62 ~~~~~~~~g~~~~l~C~~~~-----~p~p~v~W~~~~~~~~~~--------~~~~~~~~~~--~----~~~~~~~L~i~~ 122 (194)
+....+.+|+.+.|.|.+.+ .|.|.+.|++ ++..... ...+...... . ......+|.|.+
T Consensus 183 ~~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~ 261 (363)
T 1wio_A 183 SSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQA-ERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQ 261 (363)
T ss_dssp EEEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEE-SSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESS
T ss_pred CCceEEecCCEEEEEEEEecccccCCCceeEEEec-CCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEcc
Confidence 13445678999999998877 7788999998 4433322 2222111000 0 000124899999
Q ss_pred cCCCCCeEEEEEEEcC--CCceEEEEEEEcc
Q psy16426 123 VTKQDFGAYKCVSKNS--LGDTDGSIKLYGK 151 (194)
Q Consensus 123 ~~~~d~g~y~C~a~n~--~g~~~~~~~l~v~ 151 (194)
+..+|.|.|+|.|.|. .|.....+.|.|.
T Consensus 262 v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~ 292 (363)
T 1wio_A 262 ALPQYAGSGNLTLALEAKTGKLHQEVNLVVM 292 (363)
T ss_dssp BCGGGCEEEEEEECBTTTTCCEEEEEEEEEE
T ss_pred CCcCcCcEEEEEEEEhhhcCeEEEEEeEEEE
Confidence 9999999999999999 9988888777765
No 121
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.57 E-value=1.1e-15 Score=119.19 Aligned_cols=140 Identities=21% Similarity=0.359 Sum_probs=64.2
Q ss_pred CCeEEEcCCeeeeeCCCcEEEEeeeecc-CCceeEEEecCceEE------------------------------------
Q psy16426 9 PPMIWIQNQLVGAMEGDQMTLECHSEAY-PKSINYWTKENGEII------------------------------------ 51 (194)
Q Consensus 9 ~P~~~~~~~~~~v~~G~~v~L~C~~~g~-p~~~v~W~k~~~~l~------------------------------------ 51 (194)
+|.+. .+.+..+.+|++++|.|.+.+. |.+.+.|++++..+.
T Consensus 9 ~p~~~-~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~ 87 (334)
T 1ry7_B 9 GPEPG-QQEQLVFGSGDAVELSCPPPGGGPMGPTVWVKDGTGLVPSERVLVGPQRLQVLNASHEDSGAYSCRQRLTQRVL 87 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCC-CcCcEEEecCCcEEEEeeCCCCCCCcceEEEECCeeCCCcccEEeccceEEEeecccccCEEEEEEEEeCCeEE
Confidence 34444 3777889999999999999986 578999999876542
Q ss_pred ------Eee----------------------CCeEEe----ccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeC
Q psy16426 52 ------AQV----------------------PPMIWI----QNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQ 99 (194)
Q Consensus 52 ------v~~----------------------~p~i~~----~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~ 99 (194)
|.. +|.+.. ......+.+|+.+.|.|.+.+.|.+.+.|++ ++..+..
T Consensus 88 ~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~-~~~~~~~ 166 (334)
T 1ry7_B 88 CHFSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLK-NGREFRG 166 (334)
T ss_dssp -------------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCB-TTBCCCT
T ss_pred EEEEEEEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEE-CCEECcc
Confidence 111 111110 0112456789999999999999999999999 4444333
Q ss_pred CCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEcccC
Q psy16426 100 GSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGKKK 153 (194)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~ 153 (194)
........... ...+|.|.++..+|.|.|+|.+.|..|.....+.|.|...
T Consensus 167 ~~~~~~~~~~~---~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 217 (334)
T 1ry7_B 167 EHRIGGIKLRH---QQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLER 217 (334)
T ss_dssp TSSTTCCCCCT---TTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECC
T ss_pred cccccceeccc---ceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecC
Confidence 22211011111 1248999999999999999999999998888888887654
No 122
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.57 E-value=4.9e-14 Score=119.19 Aligned_cols=143 Identities=20% Similarity=0.264 Sum_probs=102.3
Q ss_pred cccCC-eEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceEE---------------------------------
Q psy16426 6 QNVPP-MIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEII--------------------------------- 51 (194)
Q Consensus 6 v~~~P-~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~--------------------------------- 51 (194)
|..+| .+.+.+....+.+|++++|.|.+.|.|.+.+.|++++..+.
T Consensus 377 V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~ 456 (642)
T 1e07_A 377 VLYGPDDPTISPSYTYYRPGVNLSLSCHAASNPPAQYSWLIDGNIQQHTQELFISNITEKNSGLYTCQANNSASGHSRTT 456 (642)
T ss_pred EEcCCCCCeecCCceEecCCCcEEEEEEcCccCCCeEEEEECCEEcCCCceEEEccCChhhCeEEEEEEEcCCCCCcccc
Confidence 43344 34455667788999999999999999999999999875542
Q ss_pred -----Ee---eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeec
Q psy16426 52 -----AQ---VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAV 123 (194)
Q Consensus 52 -----v~---~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~ 123 (194)
|. .+|.+.. .....+.+|+.+.|.|.+.+ +.+.+.|++ ++..+....++.. ..+ .+.|.|.++
T Consensus 457 ~~~v~v~~~~~~p~i~~-~~~~~v~~g~~v~l~C~~~~-~~~~i~W~~-~g~~l~~~~~~~~-~~~-----~~~L~i~~v 527 (642)
T 1e07_A 457 VKTITVSAELPKPSISS-NNSKPVEDKDAVAFTCEPEA-QNTTYLWWV-NGQSLPVSPRLQL-SNG-----NRTLTLFNV 527 (642)
T ss_pred eEEEEEeccCCCceEec-CCceeecCCCeEEEEEECCC-CCcEEEEEE-CCEeCCCCCcEEE-cCC-----CcEEEEeec
Confidence 11 1233322 22344678999999999984 778999999 5555544444331 111 248999999
Q ss_pred CCCCCeEEEEEEEcCCCceEE-EEEEEcccCCCCC
Q psy16426 124 TKQDFGAYKCVSKNSLGDTDG-SIKLYGKKKKKKK 157 (194)
Q Consensus 124 ~~~d~g~y~C~a~n~~g~~~~-~~~l~v~~~p~~p 157 (194)
...|.|.|+|.|.|..|...+ .+.|.|...|..+
T Consensus 528 ~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~ 562 (642)
T 1e07_A 528 TRNDARAYVCGIQNSVSANRSDPVTLDVLYGPDTP 562 (642)
T ss_pred ChhcCceEEEEeEcCCCCccCCCEEEEEEeCCCcc
Confidence 999999999999999987654 5777777665544
No 123
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.57 E-value=4.6e-14 Score=106.04 Aligned_cols=122 Identities=15% Similarity=0.217 Sum_probs=87.4
Q ss_pred cccCCeEEEcCCeeeeeCCCcEEEEeee-eccCCceeEEEecCceEE---------------------------------
Q psy16426 6 QNVPPMIWIQNQLVGAMEGDQMTLECHS-EAYPKSINYWTKENGEII--------------------------------- 51 (194)
Q Consensus 6 v~~~P~~~~~~~~~~v~~G~~v~L~C~~-~g~p~~~v~W~k~~~~l~--------------------------------- 51 (194)
|..+|.+ ..+....+.+|+++.|.|.+ .+.|.+.+.|++++..+.
T Consensus 80 v~~~~~~-~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~~~~~ 158 (262)
T 3rjd_A 80 IHRGWLL-LQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNISHNGTYHCSGMGKHRYTS 158 (262)
T ss_dssp EECSSEE-EEESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEEEECCCEEESSCCGGGCEEEEEEEESSSEEEE
T ss_pred EeccceE-ecCCCeEEecCCeEEEEEEccCCCCCceEEEEECCccccccCCCCeEEEEECChhhCEEEEEEEeCCCCccc
Confidence 4445543 44555678899999999999 677888999999876653
Q ss_pred ------Ee---eCCeEEeccceeEEeeCCeEEEEEEeeccCC-Cc----cEEEecCcEEeeCCCceeEEecCCceeEEEE
Q psy16426 52 ------AQ---VPPMIWIQNQLVGAMEGDQMTLECHSEAYPK-SI----NYWTKENGEIIAQGSKYEPILLDNAYKIHMK 117 (194)
Q Consensus 52 ------v~---~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~-p~----v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (194)
|. .+|.+...+ ...+..|+.+.|.|.+.+.|. |. +.|++ ++...... . ..+.
T Consensus 159 ~~~~l~V~~~~~~p~~~~~~-~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~-~~~~~~~~-------~-----~~~~ 224 (262)
T 3rjd_A 159 AGISVTVKELFPAPVLNASV-TSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYM-GSKTLRGR-------N-----TSSE 224 (262)
T ss_dssp ECEEEEEECSSCCCEEEESS-CSSEETTCCEEEEEECCCCCC-----EEEEEEE-TTEEEEEE-------E-----SCCE
T ss_pred cceEEEeccCCCCCeEeecC-ceeecCCCeEEEEeEcccCCCCCCccEEEEEEe-CCcEeccc-------C-----CCce
Confidence 22 134444433 445778999999999999875 54 45777 44433211 0 1248
Q ss_pred EEEeecCCCCCeEEEEEEEcCCCce
Q psy16426 118 LTIKAVTKQDFGAYKCVSKNSLGDT 142 (194)
Q Consensus 118 L~i~~~~~~d~g~y~C~a~n~~g~~ 142 (194)
|.|.++..+|.|.|+|.|.|..|..
T Consensus 225 L~i~~v~~~d~G~Y~C~a~n~~G~~ 249 (262)
T 3rjd_A 225 YQILTARREDSGLYWCEAATEDGNV 249 (262)
T ss_dssp EEESSCCGGGCEEEEEEEEETTSSC
T ss_pred EEEEEechhhCeEEEEEEEcccCce
Confidence 9999999999999999999999975
No 124
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.56 E-value=7.4e-14 Score=101.69 Aligned_cols=125 Identities=15% Similarity=0.202 Sum_probs=81.6
Q ss_pred cccccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceEE--------------------------------
Q psy16426 4 QGQNVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEII-------------------------------- 51 (194)
Q Consensus 4 ~~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~-------------------------------- 51 (194)
.++..+|.|...+. ..+.+|++++|.|.+.+ +.+.+.|++++..+.
T Consensus 3 ~~~~~~P~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C 80 (201)
T 1nkr_A 3 EGVHRKPSLLAHPG-PLVKSEETVILQCWSDV-MFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRC 80 (201)
T ss_dssp ----CCCEEEEESC-SEEETTCCEEEEEEESS-CCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEE
T ss_pred cCcCCCCeEEEEcC-CccCCCCcEEEEEeccC-CCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEE
Confidence 45678899988886 67889999999999974 678999999875320
Q ss_pred -E--------------------e---eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEe
Q psy16426 52 -A--------------------Q---VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPIL 107 (194)
Q Consensus 52 -v--------------------~---~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~ 107 (194)
+ . .+|.+...+. ..+.+|+.+.|.|.+.+ +.+.+.|++++ ......... ...
T Consensus 81 ~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g-~~~~~~~~~-~~~ 156 (201)
T 1nkr_A 81 YGSVTHSPYQVSAPSDPLDIVIIGLYEKPSLSAQPG-PTVLAGENVTLSCSSRS-SYDMYHLSREG-EAHERRLPA-GPK 156 (201)
T ss_dssp EEEBTTBTTCCCCCCCCEEEEEECSSCCCEEEEESC-SEECTTCEEEEEEEESS-CCSEEEEEETT-CSSCEEEEC-EEE
T ss_pred eEecCCCCccccCCCCCEEEEeeccCCCCceecCCC-CccCCCCeEEEEEeCCC-CCceEEEEECC-cccCccccc-ccc
Confidence 1 0 0122222222 34678999999999886 56788899944 322211100 011
Q ss_pred cCCceeEEEEEEEeecCCCCCeEEEEEEEcC
Q psy16426 108 LDNAYKIHMKLTIKAVTKQDFGAYKCVSKNS 138 (194)
Q Consensus 108 ~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~ 138 (194)
... .....|.|.+++ |.|.|+|.+.+.
T Consensus 157 ~~~--~~~~~L~i~~v~--d~G~Y~C~a~~~ 183 (201)
T 1nkr_A 157 VNG--TFQADFPLGPAT--HGGTYRCFGSFH 183 (201)
T ss_dssp ETT--EEEEEEEEEECC--SCEEEEEEEEET
T ss_pred cCC--ceEEEEEeCCcC--CCeeEEEEEEcC
Confidence 111 124689999998 999999999865
No 125
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.56 E-value=4.3e-14 Score=91.33 Aligned_cols=94 Identities=19% Similarity=0.316 Sum_probs=72.6
Q ss_pred eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEE
Q psy16426 54 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKC 133 (194)
Q Consensus 54 ~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C 133 (194)
.+|.+...+....+.+|+.+.|.|.+.+.|.|.+.|++ ++..+...........+.. ..+|.|.++..+|.|.|+|
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k-~~~~~~~~~~~~~~~~~~~---~~~L~i~~~~~~D~G~Y~C 79 (99)
T 1u2h_A 4 APPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLR-NRQPVRPDQRRFAEEAEGG---LCRLRILAAERGDAGFYTC 79 (99)
T ss_dssp EEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEE-TTEECCCBTTEEEEECGGG---EEEEEESSCCGGGCEEEEE
T ss_pred CCCEEEEcCCceEecCCCEEEEEEEEEEcCCCEEEEEE-CCEECCCCCCEEEEECCCC---EEEEEEccCCcCCCEEEEE
Confidence 46777777777788999999999999999999999999 4544433322211222221 3589999999999999999
Q ss_pred EEEcCCCceEEEEEEEcc
Q psy16426 134 VSKNSLGDTDGSIKLYGK 151 (194)
Q Consensus 134 ~a~n~~g~~~~~~~l~v~ 151 (194)
.+.|..|.....+.|.|.
T Consensus 80 ~a~N~~g~~~~~~~l~V~ 97 (99)
T 1u2h_A 80 KAVNEYGARQCEARLEVR 97 (99)
T ss_dssp EEEETTEEEEEEEEEEEE
T ss_pred EEEECCCceeEEEEEEEE
Confidence 999999998888888774
No 126
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.56 E-value=1.3e-14 Score=113.40 Aligned_cols=138 Identities=20% Similarity=0.226 Sum_probs=92.2
Q ss_pred CCeEEEcCCeeeeeCCCcEEEEeeeecc---------CCceeEEEecCceEE----------------------------
Q psy16426 9 PPMIWIQNQLVGAMEGDQMTLECHSEAY---------PKSINYWTKENGEII---------------------------- 51 (194)
Q Consensus 9 ~P~~~~~~~~~~v~~G~~v~L~C~~~g~---------p~~~v~W~k~~~~l~---------------------------- 51 (194)
+........++.+.+|+++.|.|.+.+. |.+.|.|++++..+.
T Consensus 29 ~~c~~~~~~~v~v~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~L~i~~v~~~D~Gs~Y~C~ 108 (329)
T 3oq3_B 29 PSCMFGGTMNDMAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRRVKNGDLWIANYTSNDSHRRYLCT 108 (329)
T ss_dssp TTSEEEEEEEEEECTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEECSTTEETTEEEESSCCGGGGGCCEEEE
T ss_pred CCcccCCcceEEEECCCeEEEEccCCCCccccccccCCCCeeEEEECCCCccccCceeecceEEEcCCChHhCCCcEEEE
Confidence 3344444466778999999999998884 557999999874321
Q ss_pred ----------------EeeCCeEEeccceeEEeeCCeEEEEEEeeccC-CCccEEEecCcEEeeCCCceeEEecCCceeE
Q psy16426 52 ----------------AQVPPMIWIQNQLVGAMEGDQMTLECHSEAYP-KSINYWTKENGEIIAQGSKYEPILLDNAYKI 114 (194)
Q Consensus 52 ----------------v~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p-~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (194)
+..+|.+........+.+|+.+.|.|.+.+.| .|.+.|++++..+.....++. .. +
T Consensus 109 a~n~~g~~~~~~~~~v~~~~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~--~~-~---- 181 (329)
T 3oq3_B 109 VTTKNGDCVQGIVRSHIRKPPSCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYS--QS-G---- 181 (329)
T ss_dssp EECTTSCEEEEEEEEEECCCCSCEEEEEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEE--EE-T----
T ss_pred EEeCCCceeeEEEEEEEcCCCcEeccccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEe--cC-C----
Confidence 01122211111122234589999999999998 899999994433322333332 11 1
Q ss_pred EEEEEEeecCCCCCeEEEEEEEcC--CCceEEE----EEEEcccCC
Q psy16426 115 HMKLTIKAVTKQDFGAYKCVSKNS--LGDTDGS----IKLYGKKKK 154 (194)
Q Consensus 115 ~~~L~i~~~~~~d~g~y~C~a~n~--~g~~~~~----~~l~v~~~p 154 (194)
..|.|.++..+|.|.|+|.+.|. .|..... +.|.|...|
T Consensus 182 -~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~ 226 (329)
T 3oq3_B 182 -QNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQ 226 (329)
T ss_dssp -TEEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCC
T ss_pred -CEEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCC
Confidence 38999999999999999999987 6554433 667776555
No 127
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.56 E-value=1.1e-14 Score=106.76 Aligned_cols=74 Identities=24% Similarity=0.385 Sum_probs=52.8
Q ss_pred eCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeec-CCCCCeEEEEEEEcCCCce-EEEE
Q psy16426 69 EGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAV-TKQDFGAYKCVSKNSLGDT-DGSI 146 (194)
Q Consensus 69 ~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~-~~~d~g~y~C~a~n~~g~~-~~~~ 146 (194)
+|+.+.|.|. +.|.|.+.|++ ++..+............ ...|.|.++ ..+|.|.|+|.|.|..|.. ...+
T Consensus 127 ~G~~v~L~C~--g~p~p~i~W~k-~~~~l~~~~~~~~~~~~-----~~~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l 198 (204)
T 1sy6_A 127 SGTTVILTCP--QYPGSEILWQH-NDKNIGGDEDDKNIGSD-----EDHLSLKEFSELEQSGYYVCYPRGSKPEDANFYL 198 (204)
T ss_dssp ETTEEEEECS--CCCSSCEEEEE-TTEEESCCTTCTTEEEE-----TTEEEETTCCHHHHCEEEEEEETTSCGGGSSCEE
T ss_pred cCCcEEEEcC--CCCCCceEEEE-CCEECCCccCCceEecC-----CCEEEEeeCCccccCEEEEEEeccCCCCceeEEE
Confidence 8999999998 77888999999 55444322111111111 248999999 9999999999999999863 4455
Q ss_pred EEEc
Q psy16426 147 KLYG 150 (194)
Q Consensus 147 ~l~v 150 (194)
.|.+
T Consensus 199 ~l~~ 202 (204)
T 1sy6_A 199 YLRA 202 (204)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5544
No 128
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.56 E-value=5.4e-14 Score=107.23 Aligned_cols=134 Identities=19% Similarity=0.215 Sum_probs=96.8
Q ss_pred cCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceE------------E------------------------
Q psy16426 8 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEI------------I------------------------ 51 (194)
Q Consensus 8 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l------------~------------------------ 51 (194)
.+|.+...+....+.+|++++|.|.+.+ .+.|++++... .
T Consensus 3 p~p~i~~~~~~~~v~~G~~v~L~C~~~~----~v~W~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~ 78 (289)
T 3ejj_X 3 PAPVIEPSGPELVVEPGETVTLRCVSNG----SVEWDGPISPYWTLDPESPGSTLTTRNATFKNTGTYRCTELEDPMAGS 78 (289)
T ss_dssp -CCEEESCSSEEEECTTCCEEEEEECSS----CCEEECSCSSSSEECCCSSCCEEEESSCCGGGCEEEEEECCC-----C
T ss_pred CCcEecCCCceEEECCCCCEEEEEEeCC----cEEEccCCCceEEEeccCCccEEEEeeeccccCEEEEEEEeccCCcce
Confidence 4678887778889999999999999987 49999865321 1
Q ss_pred ------EeeCCe-EEeccceeEEeeCCeEEEEEEeeccCCCc-cEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeec
Q psy16426 52 ------AQVPPM-IWIQNQLVGAMEGDQMTLECHSEAYPKSI-NYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAV 123 (194)
Q Consensus 52 ------v~~~p~-i~~~~~~~~~~~g~~~~l~C~~~~~p~p~-v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~ 123 (194)
|..+|. +........+.+|+.+.|.|.+.+.+.+. +.|++.++.......++. .... ..|.|.++
T Consensus 79 ~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~--~~~~-----~~L~i~~v 151 (289)
T 3ejj_X 79 TTIHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYF--FSPW-----RGFIIRKA 151 (289)
T ss_dssp EEEEEEECCSSCSEEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEE--EETT-----TEEEESSC
T ss_pred eEEEEEEeCCCcceecccceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCccEE--ECCC-----CCEEEeec
Confidence 333332 34445667788999999999999877665 899875666655444432 1222 27999999
Q ss_pred CCCCCeEEEEEEE-cCCCceEEEEEEEccc
Q psy16426 124 TKQDFGAYKCVSK-NSLGDTDGSIKLYGKK 152 (194)
Q Consensus 124 ~~~d~g~y~C~a~-n~~g~~~~~~~l~v~~ 152 (194)
..+|.|.|+|.+. |..+.....+.|.|..
T Consensus 152 ~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~ 181 (289)
T 3ejj_X 152 KVLDSNTYVCKTMVNGRESTSTGIWLKVNR 181 (289)
T ss_dssp CGGGCEEEEEEEEETTEEEECCCEEEEEES
T ss_pred ccccCEEEEEEEEeCCCccccccEEEEEEE
Confidence 9999999999999 5555555567777764
No 129
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.56 E-value=3.2e-14 Score=93.23 Aligned_cols=96 Identities=20% Similarity=0.324 Sum_probs=75.0
Q ss_pred eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEE
Q psy16426 54 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKC 133 (194)
Q Consensus 54 ~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C 133 (194)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++ ++..+....++...... ...+|.|.++..+|.|.|+|
T Consensus 12 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~-~~~~~~~~~~~~~~~~~----~~~~L~i~~~~~~D~G~Y~C 86 (107)
T 3irg_B 12 SPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEK-GGQQLAASERLSFPADG----AEHGLLLTAALPTDAGVYVC 86 (107)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEE-TTEECCCCSSEECCEET----TEEEEEESSCCGGGCEEEEE
T ss_pred CCCeeEcCCccEEEeCCCeEEEEEEEeecCCCEEEEEE-CCeECCCCCcEEEEeCC----CEEEEEEccCCHHhCEEEEE
Confidence 46777777777888999999999999999999999999 55555444444322111 13589999999999999999
Q ss_pred EEEcCCCceEEEEEEEcccCC
Q psy16426 134 VSKNSLGDTDGSIKLYGKKKK 154 (194)
Q Consensus 134 ~a~n~~g~~~~~~~l~v~~~p 154 (194)
.+.|..|.....+.|.|..+|
T Consensus 87 ~a~n~~g~~~~~~~l~V~~~P 107 (107)
T 3irg_B 87 RARNAAGEAYAAAAVTVLEPP 107 (107)
T ss_dssp EEEETTEEEEEEEEEEEEC--
T ss_pred EEEcCCCcEEEEEEEEEEcCC
Confidence 999999998888888887654
No 130
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.55 E-value=8.5e-15 Score=96.19 Aligned_cols=99 Identities=23% Similarity=0.329 Sum_probs=64.1
Q ss_pred eeCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEE
Q psy16426 53 QVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYK 132 (194)
Q Consensus 53 ~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~ 132 (194)
..+|.+...+....+.+|+.+.|.|.+.+.|.|.+.|++++. ......... ..... ++|.|.++..+|.|.|+
T Consensus 8 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~-~~~~~~~~~-~~~~~-----~~L~i~~v~~~D~G~Y~ 80 (108)
T 3kvq_A 8 RVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNE-TLVEDSGIV-LKDGN-----RNLTIRRVRKEDEGLYT 80 (108)
T ss_dssp ---CCCBSCCCCEEEETTCCEEEECBCC----CCEEEEESSS-BCCCBTTEE-EETTT-----TEEEECSCCGGGCEEEE
T ss_pred cCCCceecCCCCeEEeCCCeEEEEEECcCcCCCeEEEEECCe-EcccCCCeE-EeCCC-----cEEEEeecCcccCEEEE
Confidence 356666666677788999999999999999999999999443 333332332 12222 38999999999999999
Q ss_pred EEEEcCCCceEEEEEEEcccCCCCCh
Q psy16426 133 CVSKNSLGDTDGSIKLYGKKKKKKKK 158 (194)
Q Consensus 133 C~a~n~~g~~~~~~~l~v~~~p~~p~ 158 (194)
|.+.|..|.....+.|.|...|..+.
T Consensus 81 C~a~n~~g~~~~~~~l~V~~~~~~~~ 106 (108)
T 3kvq_A 81 CQACSVLGCAKVEAFFIIEGAQEKTN 106 (108)
T ss_dssp EEEC----CEEEEEEEEEEC------
T ss_pred EEEEeCCCceEEEEEEEEeCCCcccc
Confidence 99999999999999999988776654
No 131
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.55 E-value=4.1e-14 Score=110.02 Aligned_cols=142 Identities=15% Similarity=0.249 Sum_probs=94.7
Q ss_pred CCeEEEcCCeeeeeCCCcEEEEeeeecc----CCceeEEEecCc-----------------------------------e
Q psy16426 9 PPMIWIQNQLVGAMEGDQMTLECHSEAY----PKSINYWTKENG-----------------------------------E 49 (194)
Q Consensus 9 ~P~~~~~~~~~~v~~G~~v~L~C~~~g~----p~~~v~W~k~~~-----------------------------------~ 49 (194)
|+.+...+.++.+.+|++++|.|.+.+. +.+.+.|++++. .
T Consensus 14 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 93 (331)
T 3u83_A 14 PSQVVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGT 93 (331)
T ss_dssp -------CEEEEEETTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSBCC
T ss_pred CcceEEcCCcEEEEecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCCce
Confidence 4455566677889999999999998876 556899999531 1
Q ss_pred EE-------------------------------EeeCCeEEe--ccceeEEeeC---CeEEEEEE-eeccCCCccEEEec
Q psy16426 50 II-------------------------------AQVPPMIWI--QNQLVGAMEG---DQMTLECH-SEAYPKSINYWTKE 92 (194)
Q Consensus 50 l~-------------------------------v~~~p~i~~--~~~~~~~~~g---~~~~l~C~-~~~~p~p~v~W~~~ 92 (194)
|. |..+|.+.. ......+.+| +.+.|.|. +.+.|.+.+.|+++
T Consensus 94 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~ 173 (331)
T 3u83_A 94 IRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETR 173 (331)
T ss_dssp EEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEES
T ss_pred EEEcccCcccCcEEEEEEEecCCCccEEEEEEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCCceEEEEcC
Confidence 11 344554422 3344556677 77999997 88889999999984
Q ss_pred CcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEcccC
Q psy16426 93 NGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGKKK 153 (194)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~ 153 (194)
....... ......+..+...+.|.|.++..+|.|.|+|.+.|..|.....+.|.|...
T Consensus 174 ~~~~~~~---~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~ 231 (331)
T 3u83_A 174 LKGEAEY---QEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYE 231 (331)
T ss_dssp SCCEEEE---EEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEEE
T ss_pred CCCcccc---ceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEecC
Confidence 2222110 111223334445678999999999999999999999888777777766543
No 132
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.55 E-value=1.3e-14 Score=115.56 Aligned_cols=141 Identities=23% Similarity=0.367 Sum_probs=97.9
Q ss_pred cccCCeEE-EcCCeeeeeCCCcEEEEeee-eccCCceeEEEecCceEE-------------------------------E
Q psy16426 6 QNVPPMIW-IQNQLVGAMEGDQMTLECHS-EAYPKSINYWTKENGEII-------------------------------A 52 (194)
Q Consensus 6 v~~~P~~~-~~~~~~~v~~G~~v~L~C~~-~g~p~~~v~W~k~~~~l~-------------------------------v 52 (194)
|..+|.+. ....+..+.+|++++|.|.+ .+.|.+.+.|++++.... +
T Consensus 112 V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~~G~Y~C~a 191 (404)
T 3p3y_A 112 VSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNA 191 (404)
T ss_dssp ECCCCCCCCCCCCCEEEETTSCEEECCCCCCCSSCCEEEEECTTSCBCCCCSSEEECTTSCEEESSCCSGGGSSCBEEEE
T ss_pred EeccCccccCCCCCeEEccCCcEEEEeCCCCCCCCCeEEEeCCCccccCCCCcEEEcCCCcEEEEeeeeccCCcceEEEE
Confidence 44455443 23355788999999999998 788899999999764321 0
Q ss_pred ------------------ee-------CCeEEec---cceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCcee
Q psy16426 53 ------------------QV-------PPMIWIQ---NQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYE 104 (194)
Q Consensus 53 ------------------~~-------~p~i~~~---~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~ 104 (194)
.. +|.+... .....+.+|+.+.|.|.+.+.|.+.+.|++ ++........ .
T Consensus 192 ~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~-~~~~~~~~~~-~ 269 (404)
T 3p3y_A 192 RFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYK-KGGDLPSDKA-K 269 (404)
T ss_dssp ECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEECCBCCSSCCEEEEEE-TTBCCCTTTE-E
T ss_pred EeccccceeccCceeEEEeccCCccccCCccccccCCCCCceEecCCCEEEEEEECCCCCCcEEEEE-CCEECCCCcc-c
Confidence 00 1111000 123446789999999999999999999999 4444333222 1
Q ss_pred EEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEcccCC
Q psy16426 105 PILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGKKKK 154 (194)
Q Consensus 105 ~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~p 154 (194)
.... .+.|.|.++..+|.|.|+|.+.|..|.....+.|.|...|
T Consensus 270 -~~~~-----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 313 (404)
T 3p3y_A 270 -FENF-----NKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 313 (404)
T ss_dssp -EEGG-----GTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEE
T ss_pred -cccc-----CceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeCCC
Confidence 1111 2389999999999999999999999998888888776543
No 133
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.55 E-value=1.3e-13 Score=103.76 Aligned_cols=99 Identities=18% Similarity=0.284 Sum_probs=61.7
Q ss_pred CeEEeccceeEEeeCCeEEEEEEeeccCCC----ccEEEecCc-E----EeeC--------CCceeEEecCCceeEEEEE
Q psy16426 56 PMIWIQNQLVGAMEGDQMTLECHSEAYPKS----INYWTKENG-E----IIAQ--------GSKYEPILLDNAYKIHMKL 118 (194)
Q Consensus 56 p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p----~v~W~~~~~-~----~~~~--------~~~~~~~~~~~~~~~~~~L 118 (194)
+.+...+....+.+|+++.|.|.+.+.+.+ .++|+++.. . +... ..++..... ....+|
T Consensus 134 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~----~~~~~L 209 (253)
T 3uzq_A 134 LVMTQTPASLAVSLGQRATISCRASENVDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGS----RTDFTL 209 (253)
T ss_dssp CCEEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE----TTEEEE
T ss_pred ceEECcCCeEEEeCCCCEEEEEEecCccccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCC----CCEEEE
Confidence 344444555678899999999999988776 899997421 1 1100 112221111 114589
Q ss_pred EEeecCCCCCeEEEEEEEcCCCceE-EEEEEEcccCCCCCh
Q psy16426 119 TIKAVTKQDFGAYKCVSKNSLGDTD-GSIKLYGKKKKKKKK 158 (194)
Q Consensus 119 ~i~~~~~~d~g~y~C~a~n~~g~~~-~~~~l~v~~~p~~p~ 158 (194)
.|.+++.+|.|.|+|.+.|..+..- ....|.|.+.+..|.
T Consensus 210 ~I~~v~~~DsG~Y~C~~~n~~~~~fg~gt~l~v~~~~~~~~ 250 (253)
T 3uzq_A 210 TINPVEADDVATYFCQRSNEVPWTFGGGTKLEIKRPLEHHH 250 (253)
T ss_dssp EESSCCGGGCEEEEEEECSSSSCCBCCCEEEEECCC-----
T ss_pred EECCCCHHHCEEEEEEEccCCCcEECCCEEEEEcCCCCCcc
Confidence 9999999999999999998654322 245677766655443
No 134
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.55 E-value=7.2e-15 Score=111.33 Aligned_cols=120 Identities=16% Similarity=0.157 Sum_probs=85.5
Q ss_pred CCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceEE-------------------------------------
Q psy16426 9 PPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEII------------------------------------- 51 (194)
Q Consensus 9 ~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~------------------------------------- 51 (194)
+|.+. +.+..+.+|++++|.|.+. |.+.+.| ++..+.
T Consensus 100 ~p~~~--~~~~~v~~G~~v~l~C~~~--p~~~i~W--~g~~~~~~~~~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s 173 (265)
T 2oz4_A 100 APNVI--LTKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQPLGPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKN 173 (265)
T ss_dssp CCEEE--ESCSEEETTCEEEEEEECC--TTSEEEE--SSCSSSCCSSEECCEEECCGGGTTEEEEEEEEEECSSSEEEEE
T ss_pred Cceee--cCCceecCCCcEEEEEEcc--CCCEEEE--CCEEccCCCCcEEEEEccccccCCceEEEEEEcCCCCCccccc
Confidence 34554 4456788999999999998 8899999 543321
Q ss_pred ------EeeCCeEEec--cceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeec
Q psy16426 52 ------AQVPPMIWIQ--NQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAV 123 (194)
Q Consensus 52 ------v~~~p~i~~~--~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~ 123 (194)
|.++|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++++...... + .+ ..+
T Consensus 174 ~~~~l~V~~~p~~~~~~~p~~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~~~~~~~----------g------~~--~~v 235 (265)
T 2oz4_A 174 QTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPI----------G------ES--VTV 235 (265)
T ss_dssp EEEEEEEEEEEECCGGGSCSEEEEETTCEECCCCCCEEESCCEEEEEETTTEECCT----------T------SC--EEC
T ss_pred ccEEEEEEeCCccccccCCCccEEcCCCeEEEEeECccCCCCeEEEEECCcccCCC----------C------cE--EEe
Confidence 1222222211 23456788999999999999999999999955422111 1 11 236
Q ss_pred CCCCCeEEEEEEEcCCCceEEEEEEEccc
Q psy16426 124 TKQDFGAYKCVSKNSLGDTDGSIKLYGKK 152 (194)
Q Consensus 124 ~~~d~g~y~C~a~n~~g~~~~~~~l~v~~ 152 (194)
..+|.|.|+|.|.|..|.....+.|.|..
T Consensus 236 ~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 264 (265)
T 2oz4_A 236 TRDLEGTYLCRARSTQGEVTREVTVNVLS 264 (265)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred ehhhCeEEEEEEECCCCcEEEEEEEEEec
Confidence 77999999999999999999888888754
No 135
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.55 E-value=8.7e-14 Score=106.26 Aligned_cols=149 Identities=11% Similarity=0.171 Sum_probs=92.5
Q ss_pred ccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCc-------------------------------eEE----
Q psy16426 7 NVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENG-------------------------------EII---- 51 (194)
Q Consensus 7 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~-------------------------------~l~---- 51 (194)
...+.+...+.++.+.+|++++|.|.+.+.|.+.+.||+++. .|.
T Consensus 10 ~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 89 (276)
T 3auv_A 10 SGDIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSL 89 (276)
T ss_dssp --CCCEEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSC
T ss_pred ccceeEEeCCCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccC
Confidence 346778888888999999999999999998889999998541 111
Q ss_pred ---------------------------EeeCC--------------eEEeccceeEEeeCCeEEEEEEeeccC--CCccE
Q psy16426 52 ---------------------------AQVPP--------------MIWIQNQLVGAMEGDQMTLECHSEAYP--KSINY 88 (194)
Q Consensus 52 ---------------------------v~~~p--------------~i~~~~~~~~~~~g~~~~l~C~~~~~p--~p~v~ 88 (194)
|..+| .....+....+.+|+.+.|.|.+.+.+ .+.+.
T Consensus 90 ~~~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~ 169 (276)
T 3auv_A 90 QPEDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIH 169 (276)
T ss_dssp CGGGCEEEEEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEE
T ss_pred ChhhCEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCccCCCCEEE
Confidence 11111 111223345577899999999998876 47899
Q ss_pred EEecC-cE-E--ee--------------CCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCC---Cc--eEEE
Q psy16426 89 WTKEN-GE-I--IA--------------QGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSL---GD--TDGS 145 (194)
Q Consensus 89 W~~~~-~~-~--~~--------------~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~---g~--~~~~ 145 (194)
|++++ +. . +. ...++..... . .....+|.|.++..+|.|.|+|.+.|.. +. ....
T Consensus 170 W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~-~-~~~~~~L~I~~v~~~DsG~Y~C~a~n~~~~~~~~~fg~g 247 (276)
T 3auv_A 170 WVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISAD-T-SKNTAYLQMNSLRAEDTAVYYCARFVFFLPYAMDYWGQG 247 (276)
T ss_dssp EEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEE-G-GGTEEEEEECSCCGGGCEEEEEEEECSSTTCSCCCBCCC
T ss_pred EEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEec-C-CCcEEEEEECCCChhHCEEEEEEEEcCcCCcCceEECCC
Confidence 99853 11 1 10 0112221110 0 0123589999999999999999999972 21 1223
Q ss_pred EEEEcccCCCCC
Q psy16426 146 IKLYGKKKKKKK 157 (194)
Q Consensus 146 ~~l~v~~~p~~p 157 (194)
..|.|...+..+
T Consensus 248 t~l~V~~~~~~~ 259 (276)
T 3auv_A 248 TLVTVSSASAAA 259 (276)
T ss_dssp EEEEEC------
T ss_pred EEEEEccccccc
Confidence 566666554443
No 136
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.55 E-value=2.8e-14 Score=111.11 Aligned_cols=130 Identities=15% Similarity=0.250 Sum_probs=88.7
Q ss_pred CCeEEEcCCeeeeeCCCcEEEEeeeecc-CCceeEEEecCce-------------------------------EE-----
Q psy16426 9 PPMIWIQNQLVGAMEGDQMTLECHSEAY-PKSINYWTKENGE-------------------------------II----- 51 (194)
Q Consensus 9 ~P~~~~~~~~~~v~~G~~v~L~C~~~g~-p~~~v~W~k~~~~-------------------------------l~----- 51 (194)
...++..+.++.+.+|++++|.|.+.+. |.+.|.|++++.. |.
T Consensus 3 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~ 82 (327)
T 2wng_A 3 ELQVIQPDKSVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNIT 82 (327)
T ss_dssp CCCEECCCSEEEEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCC
T ss_pred eeEEEcCCCceEEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCc
Confidence 3457777888999999999999999987 8889999997532 11
Q ss_pred ----------E--------------------eeCC---eEEeccceeEEeeCCeEEEEEEeeccCCC--ccEEEecCcEE
Q psy16426 52 ----------A--------------------QVPP---MIWIQNQLVGAMEGDQMTLECHSEAYPKS--INYWTKENGEI 96 (194)
Q Consensus 52 ----------v--------------------~~~p---~i~~~~~~~~~~~g~~~~l~C~~~~~p~p--~v~W~~~~~~~ 96 (194)
+ ..+| .+. .....+.+|+.+.|.|.+.+.|++ .+.|++ ++..
T Consensus 83 ~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~--~~~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k-~g~~ 159 (327)
T 2wng_A 83 PADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVS--GPAARATPQHTVSFTCESHGFSPRDITLKWFK-NGNE 159 (327)
T ss_dssp GGGCEEEEEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEE--CCSSCBCTTCEEEEEEEEEEEBSSCCEEEEEE-TTEE
T ss_pred cccCeEEEEEeecCCCcceeEeecCcEEEEEEecCCCceee--ccccccCCCCEEEEEEEEeCccCCCcEEEEEE-CCEE
Confidence 1 0011 111 111335679999999999998866 789999 5554
Q ss_pred eeCCCceeEE-ecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCc
Q psy16426 97 IAQGSKYEPI-LLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGD 141 (194)
Q Consensus 97 ~~~~~~~~~~-~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~ 141 (194)
+......... ..+..+...+.|.|.....+|.|.|+|.+.|..+.
T Consensus 160 l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~ 205 (327)
T 2wng_A 160 LSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQ 205 (327)
T ss_dssp CCCEEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSC
T ss_pred ccccccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccC
Confidence 4332111100 12233445567888877777789999999998876
No 137
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.54 E-value=8.5e-14 Score=89.82 Aligned_cols=93 Identities=29% Similarity=0.387 Sum_probs=74.4
Q ss_pred eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEE
Q psy16426 54 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKC 133 (194)
Q Consensus 54 ~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C 133 (194)
.+|.+...+....+.+|+.+.|.|.+.+.|.|.+.|++ ++.......++....... .++|.|.++..+|.|.|+|
T Consensus 5 ~~P~i~~~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~-~g~~~~~~~~~~~~~~~~----~~~L~i~~~~~~d~G~Y~C 79 (99)
T 3puc_A 5 SKPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTK-DGKAITQGGKYKLSEDKG----GFFLEIHKTDTSDSGLYTC 79 (99)
T ss_dssp EEEEEEECCCCEEEESSSCEEEEEEEEEESCCEEEEEE-TTEECCSSSSEEEEEETT----EEEEEECSCCGGGCEEEEE
T ss_pred CCCEEEecCccEEEeCCCcEEEEEEEEecCCCEEEEEE-CCEECcCCCCEEEEEeCC----EEEEEECCCCcccCEEEEE
Confidence 46677767777888999999999999999999999999 565555555554332222 3589999999999999999
Q ss_pred EEEcCCCceEEEEEEEcc
Q psy16426 134 VSKNSLGDTDGSIKLYGK 151 (194)
Q Consensus 134 ~a~n~~g~~~~~~~l~v~ 151 (194)
.+.|..|.....+.|.|.
T Consensus 80 ~a~n~~g~~~~~~~l~V~ 97 (99)
T 3puc_A 80 TVKNSAGSVSSSCKLTIK 97 (99)
T ss_dssp EEEETTEEEEEEEEEEEE
T ss_pred EEEeCCCcEeEEEEEEEE
Confidence 999999998888888764
No 138
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.54 E-value=2.3e-13 Score=101.25 Aligned_cols=126 Identities=17% Similarity=0.326 Sum_probs=84.5
Q ss_pred eEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecC------------------------c-----------eEE----
Q psy16426 11 MIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKEN------------------------G-----------EII---- 51 (194)
Q Consensus 11 ~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~------------------------~-----------~l~---- 51 (194)
.+...+.++.+.+|++|+|.|. .+.+.+.+.|++++ + .|.
T Consensus 2 ~v~q~p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v 80 (238)
T 2p1y_A 2 AVTQSPRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELA 80 (238)
T ss_dssp CEEEECSEEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSC
T ss_pred cceECccceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecC
Confidence 4667788889999999999999 77788999999951 0 011
Q ss_pred -----------Ee--------------------eCC------------eEEeccceeEEeeCCeEEEEEEeeccCCCccE
Q psy16426 52 -----------AQ--------------------VPP------------MIWIQNQLVGAMEGDQMTLECHSEAYPKSINY 88 (194)
Q Consensus 52 -----------v~--------------------~~p------------~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~ 88 (194)
+. ..+ .+...+....+.+|+.+.|.|.+.+.|.+.++
T Consensus 81 ~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~ 160 (238)
T 2p1y_A 81 TPSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSYENSAFDYFP 160 (238)
T ss_dssp CGGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEECCCTTCCEEE
T ss_pred CcccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEEecCCCCcEE
Confidence 11 000 11222334557789999999999999889999
Q ss_pred EEecCc----EEe-e--------CCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCC
Q psy16426 89 WTKENG----EII-A--------QGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSL 139 (194)
Q Consensus 89 W~~~~~----~~~-~--------~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~ 139 (194)
|++++. ..+ . ...++...... .....+|.|.++..+|.|.|+|.+.|..
T Consensus 161 W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 161 WYQQFPGEGPALLISILSVSDKKEDGRFTIFFNK--REKKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp EEEECTTSCCEEEEEEETTCSEEEETTEEEEEET--TTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred EEEECCCCCCEEEEEEccCCCcccCCceEEEecC--CCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 998431 111 0 01122111000 0113689999999999999999999974
No 139
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.54 E-value=2.8e-14 Score=109.14 Aligned_cols=135 Identities=16% Similarity=0.226 Sum_probs=95.4
Q ss_pred ccccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceEE---------------------------------
Q psy16426 5 GQNVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEII--------------------------------- 51 (194)
Q Consensus 5 ~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~--------------------------------- 51 (194)
|...||.|...+.+..+.+|++++|.|.+.+ .+.|++++..+.
T Consensus 8 g~~~~P~i~~~~~~~~v~~G~~v~l~C~~~~----~i~W~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ng~~~~ 83 (290)
T 2o26_X 8 GEPSPPSIHPAQSELIVEAGDTLSLTCIDPD----FVRWTFKTYFNEMVENKKNEWIQEKAEATRTGTYTCSNSNGLTSS 83 (290)
T ss_dssp ----CCEESSCSSEEEEETTSCEEEEEECTT----EEEEEEECSSSCEEEECSSEEEETTCCGGGCEEEEEEESSSCEEE
T ss_pred CCCCCCEEeCCCCeEEEcCCCcEEEEECCCC----cEEEecCCcceeeecCCCceEEEeccCHHhCeEEEEEeeCCccEE
Confidence 3467899988888899999999999999987 899999876541
Q ss_pred ----EeeCCeEEeccceeEEeeCCeEEEEEEeeccCC-CccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCC
Q psy16426 52 ----AQVPPMIWIQNQLVGAMEGDQMTLECHSEAYPK-SINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQ 126 (194)
Q Consensus 52 ----v~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~-p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 126 (194)
|..+|.+........+.+|+.+.|.|.+.+ |. +.+.|+..++..+....++. .... ..|.|.++..+
T Consensus 84 ~~l~V~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~~~~~--~~~~-----~~L~i~~v~~~ 155 (290)
T 2o26_X 84 IYVFVRDPAKLFLVGLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPTDLTFV--PNPK-----AGITIKNVKRA 155 (290)
T ss_dssp EEEEEECSSCCBCCCCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCTTCEEE--EETT-----TEEEEESCCGG
T ss_pred EEEEEeCCCcccccccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCCCCcee--eCCC-----CCEEEecccHH
Confidence 222333223344566778999999999985 77 88999654665554443332 1111 27999999999
Q ss_pred CCe-EEEEEEEcCCCceEE-EEEEEcc
Q psy16426 127 DFG-AYKCVSKNSLGDTDG-SIKLYGK 151 (194)
Q Consensus 127 d~g-~y~C~a~n~~g~~~~-~~~l~v~ 151 (194)
|.| .|+|.+.|..+.... .+.|.|.
T Consensus 156 d~G~~Y~C~a~n~~~~~~s~~~~l~V~ 182 (290)
T 2o26_X 156 YHRLCVRCAAQRDGTWLHSDKFTLKVR 182 (290)
T ss_dssp GTTCEEEEEEEETTEEEECCCEEEEEE
T ss_pred HCCCEEEEEEEECCceEEeEEEEEEEE
Confidence 999 999999998554332 4666654
No 140
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.54 E-value=6.3e-14 Score=103.49 Aligned_cols=123 Identities=15% Similarity=0.258 Sum_probs=82.2
Q ss_pred cCCeeeeeCCCcEEEEeeeeccCC-ceeEEEecCce-------------------------------------EE-----
Q psy16426 15 QNQLVGAMEGDQMTLECHSEAYPK-SINYWTKENGE-------------------------------------II----- 51 (194)
Q Consensus 15 ~~~~~~v~~G~~v~L~C~~~g~p~-~~v~W~k~~~~-------------------------------------l~----- 51 (194)
.+.++.+.+|++++|.|.+.+.+. +.+.|++++.. |.
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~L~i~~v~ 85 (231)
T 2pet_A 6 VPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGRLVLAEAQ 85 (231)
T ss_dssp CCSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCCEEESSCC
T ss_pred CCCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCceEEEcccC
Confidence 456678899999999999999885 89999975322 11
Q ss_pred --------------------------EeeC---CeEEeccceeEEeeCCeE-EEEEEe-eccCCCccEEEecCcEEeeCC
Q psy16426 52 --------------------------AQVP---PMIWIQNQLVGAMEGDQM-TLECHS-EAYPKSINYWTKENGEIIAQG 100 (194)
Q Consensus 52 --------------------------v~~~---p~i~~~~~~~~~~~g~~~-~l~C~~-~~~p~p~v~W~~~~~~~~~~~ 100 (194)
|..+ |.+...+....+.+|..+ .|.|.+ .+.|.|.+.|++ ++..+...
T Consensus 86 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~-~~~~~~~~ 164 (231)
T 2pet_A 86 VGDERDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYR-NGQRLEVP 164 (231)
T ss_dssp GGGCEEEEEEEECGGGCEEEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEE-TTEECCCC
T ss_pred cccCceEEEEEEecCCCceEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEE-CCccCccc
Confidence 2222 233333333434578877 999999 889999999999 55544433
Q ss_pred C----ceeEE-----ecCCceeEEEEEEEeecCCCCCeEEEEEEEcC
Q psy16426 101 S----KYEPI-----LLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNS 138 (194)
Q Consensus 101 ~----~~~~~-----~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~ 138 (194)
. +.... ..++.+...+.|.|.....+|.|.|+|.|.|.
T Consensus 165 ~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~ 211 (231)
T 2pet_A 165 VEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYS 211 (231)
T ss_dssp SSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEE
T ss_pred cccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcC
Confidence 2 22211 11223334467888766666799999999994
No 141
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.54 E-value=1.5e-13 Score=113.57 Aligned_cols=134 Identities=13% Similarity=0.262 Sum_probs=91.7
Q ss_pred EcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCc-------------------------------eEE-----------
Q psy16426 14 IQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENG-------------------------------EII----------- 51 (194)
Q Consensus 14 ~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~-------------------------------~l~----------- 51 (194)
..+.++.+.+|++++|.|.+.+.+.+.|.||+++. .|.
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 84 (523)
T 2rcj_C 5 TQPPSASGTPGQRVTISCTGTSSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGLEAEDESD 84 (523)
T ss_pred ccCCceEEecCCcEEEEEEEeccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEECCCChhhCEE
Confidence 34566789999999999999998899999999641 011
Q ss_pred ----------------------E----eeCCeEEeccceeEEeeCCeEEEEEEeeccCCC--ccEEEecCcEEeeCCCce
Q psy16426 52 ----------------------A----QVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKS--INYWTKENGEIIAQGSKY 103 (194)
Q Consensus 52 ----------------------v----~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p--~v~W~~~~~~~~~~~~~~ 103 (194)
| ..+|.+...+....+.+|+.+.|.|.+.+.+++ .+.|++ ++..+......
T Consensus 85 Y~C~a~n~~g~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k-~g~~l~~~~~~ 163 (523)
T 2rcj_C 85 YYCASWNSSDNSYVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKA-DGSPVKAGVET 163 (523)
T ss_pred EEEEEccCCCccccccCceEEEeccCCCcCCeEEecCCcccccCCCceEEEEEeccccCCceEEEEec-CCCCCCCceEe
Confidence 1 112333333333344578899999999988764 899999 44433322111
Q ss_pred e--EEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEEEEE
Q psy16426 104 E--PILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKL 148 (194)
Q Consensus 104 ~--~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l 148 (194)
. ....++.+...+.|.|.++..+|.|.|+|.|.|..+.....+.+
T Consensus 164 ~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~ 210 (523)
T 2rcj_C 164 TKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAP 210 (523)
T ss_pred ccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcccccceee
Confidence 1 01123334455689999999999999999999998876655544
No 142
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.54 E-value=6.8e-15 Score=115.45 Aligned_cols=135 Identities=19% Similarity=0.225 Sum_probs=68.1
Q ss_pred eeeeeCCCcEEEEeee-----eccCCceeEEEecCceEE-----------------------------------------
Q psy16426 18 LVGAMEGDQMTLECHS-----EAYPKSINYWTKENGEII----------------------------------------- 51 (194)
Q Consensus 18 ~~~v~~G~~v~L~C~~-----~g~p~~~v~W~k~~~~l~----------------------------------------- 51 (194)
...+.+|+++.|.|.+ .+.|.+.+.|++++..+.
T Consensus 129 ~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~ 208 (349)
T 4dep_C 129 HKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFNNVIPEGMNLSFLIALISNNGNYTCVVTYPENGRTFHLT 208 (349)
T ss_dssp EEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSCSSEEEETTEEEEESCCGGGCEEEEEEEEEEETTEEEEEE
T ss_pred ceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCccceeecCCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEE
Confidence 4567889999999985 778899999999865431
Q ss_pred ------Eee------CCeEEecccee--EEeeCCeEEEEEEee----ccCCCccEEEecCcEEeeCCCceeE----E-ec
Q psy16426 52 ------AQV------PPMIWIQNQLV--GAMEGDQMTLECHSE----AYPKSINYWTKENGEIIAQGSKYEP----I-LL 108 (194)
Q Consensus 52 ------v~~------~p~i~~~~~~~--~~~~g~~~~l~C~~~----~~p~p~v~W~~~~~~~~~~~~~~~~----~-~~ 108 (194)
|.. +|.+....... .+..|+.+.|.|.+. +.|.|.+.|++++..+.....++.. . ..
T Consensus 209 ~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~ 288 (349)
T 4dep_C 209 RTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSR 288 (349)
T ss_dssp EEEEEEEECCGGGCCSCEEC----------------CCCEEEEECCCTTCCCEEEEESSCC--------CCCCEEEECCT
T ss_pred EEEEEEEEccCCCCCCCeEecCCCceeEEEecCCcEEEEEEEEEccCCCCCCEEEEEECCEEccccCCccccccceeeec
Confidence 111 33333222211 567899999999998 5688899999944333221211110 0 01
Q ss_pred CCceeEEEEEEEeecCCCCC-eEEEEEEEcCCCceEEEEEEEccc
Q psy16426 109 DNAYKIHMKLTIKAVTKQDF-GAYKCVSKNSLGDTDGSIKLYGKK 152 (194)
Q Consensus 109 ~~~~~~~~~L~i~~~~~~d~-g~y~C~a~n~~g~~~~~~~l~v~~ 152 (194)
.......++|.|.++..+|. |.|+|.|.|..|.....+.|.|..
T Consensus 289 ~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~~ 333 (349)
T 4dep_C 289 TEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAAKVKQKV 333 (349)
T ss_dssp TCCEEEEECC-------------CEEEEECSSCEEEEECC-----
T ss_pred CCCcEEEEEEEEeeccHHHcCCcEEEEEEcCCCcEEEEEEEeeec
Confidence 11123355799999999999 999999999999999888888754
No 143
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.54 E-value=7.1e-14 Score=105.19 Aligned_cols=137 Identities=14% Similarity=0.249 Sum_probs=88.9
Q ss_pred ccccCCeEEEcCCeeeeeCCCcEEEEeeeeccC-----CceeEEEecCc-------------------------------
Q psy16426 5 GQNVPPMIWIQNQLVGAMEGDQMTLECHSEAYP-----KSINYWTKENG------------------------------- 48 (194)
Q Consensus 5 ~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p-----~~~v~W~k~~~------------------------------- 48 (194)
++...+.++..+..+.+.+|++|+|.|.+.+.+ .+.|.||+++.
T Consensus 30 ~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 109 (252)
T 3bkj_L 30 GSSSDVLMTQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDF 109 (252)
T ss_dssp ----CCCEEEECSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEE
T ss_pred ccccccEEEeCCceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEE
Confidence 345677788888889999999999999999887 58999999541
Q ss_pred eEE-------------------------------Ee---eCCeEEeccceeEEeeCCeEEEEEEeeccC-CC-ccEEEec
Q psy16426 49 EII-------------------------------AQ---VPPMIWIQNQLVGAMEGDQMTLECHSEAYP-KS-INYWTKE 92 (194)
Q Consensus 49 ~l~-------------------------------v~---~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p-~p-~v~W~~~ 92 (194)
.+. |. .+|.+........+..|+.+.|.|.+.+.+ .+ .+.|++
T Consensus 110 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k- 188 (252)
T 3bkj_L 110 TLRISRVEAEDLGVYYCFQASLVPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKI- 188 (252)
T ss_dssp EEEESSCCGGGCEEEEEEECSBSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEE-
T ss_pred EEEECCCCcccCEEEEEEEEcCCccEECCCEEEEEeCCCcCcEEEEeCCChhhcCCCcEEEEEEEeeEeCCCcEEEEEE-
Confidence 111 10 022222211111123578999999998854 33 689999
Q ss_pred CcEEeeCC-Cc-eeE-EecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCce
Q psy16426 93 NGEIIAQG-SK-YEP-ILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDT 142 (194)
Q Consensus 93 ~~~~~~~~-~~-~~~-~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~ 142 (194)
++...... .. ... ...++.+...+.|.|.++..+|.|.|+|.+.|.....
T Consensus 189 ~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 241 (252)
T 3bkj_L 189 DGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 241 (252)
T ss_dssp TTEEECSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred CCeecCCCeeeecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCCC
Confidence 55544332 11 100 1123345556789999999999999999999976554
No 144
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.53 E-value=7.2e-14 Score=90.53 Aligned_cols=94 Identities=23% Similarity=0.326 Sum_probs=73.7
Q ss_pred eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEE
Q psy16426 54 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKC 133 (194)
Q Consensus 54 ~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C 133 (194)
.+|.+...+....+..|+.+.|.|.+.+.|.|.+.|++++..+.....++. .... .+|.|.++..+|.|.|+|
T Consensus 7 ~~P~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~--~~~~-----~~L~i~~v~~~d~G~Y~C 79 (100)
T 2edj_A 7 GPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRAT--IQEQ-----GTLQIKNLRISDTGTYTC 79 (100)
T ss_dssp SSCEEEECCCCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCE--ECTT-----CCEEEESCCTTTCCEEEE
T ss_pred CCCEEEeCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEE--EcCC-----CEEEEccCCcccCEEEEE
Confidence 467777777778889999999999999999999999995444432333332 1222 379999999999999999
Q ss_pred EEEcCCCceEEEEEEEcccCC
Q psy16426 134 VSKNSLGDTDGSIKLYGKKKK 154 (194)
Q Consensus 134 ~a~n~~g~~~~~~~l~v~~~p 154 (194)
.+.|..|.....+.|.|.+.|
T Consensus 80 ~a~n~~g~~~~~~~l~V~~~~ 100 (100)
T 2edj_A 80 VATSSSGETSWSAVLDVTESG 100 (100)
T ss_dssp EEECSSCCCBCCEEEEEESCC
T ss_pred EEEcCCCCEEEEEEEEEecCC
Confidence 999999998888888887653
No 145
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.52 E-value=3.9e-14 Score=103.77 Aligned_cols=131 Identities=13% Similarity=0.183 Sum_probs=83.0
Q ss_pred CeEEE-cCCeee-eeCCCcEEEEeeeeccC----CceeEEEecCceEE--------------------------------
Q psy16426 10 PMIWI-QNQLVG-AMEGDQMTLECHSEAYP----KSINYWTKENGEII-------------------------------- 51 (194)
Q Consensus 10 P~~~~-~~~~~~-v~~G~~v~L~C~~~g~p----~~~v~W~k~~~~l~-------------------------------- 51 (194)
|.+.+ .|.... +.+|++++|.|.+.|.+ ...|.|+++++.+.
T Consensus 2 p~v~~~~P~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G 81 (207)
T 2vol_A 2 SSVFIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGK 81 (207)
T ss_dssp CEEEEECCCHHHHHSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTC
T ss_pred CcEEEeCcChhhhhccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCC
Confidence 44444 445444 88999999999999874 24899999874421
Q ss_pred -----E-------------------eeCCeEEeccceeEEeeCCeEEEEEEeeccCCC--ccEEEecCcEEeeCCCcee-
Q psy16426 52 -----A-------------------QVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKS--INYWTKENGEIIAQGSKYE- 104 (194)
Q Consensus 52 -----v-------------------~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p--~v~W~~~~~~~~~~~~~~~- 104 (194)
+ ..+|.+.+.+.......|+.+.|.|.+.+.+++ .+.|++ ++..+.......
T Consensus 82 ~Y~C~a~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k-~g~~l~~~~~~~~ 160 (207)
T 2vol_A 82 EFKCRVNSAAFPAPIEKTISKTKGRPKAPQVYTLPPPKEQMAKDKVSLTCMITDFFPEDITVEWES-NGQPAENYKNTQP 160 (207)
T ss_dssp CEEEEEECTTCSSCEEEEECCCCCCCBCCEEEEECCCTGGGSSSEEEEEEEEEEEBSSCCEEEEEE-TTEECSCEEECCC
T ss_pred EEEEEEEccCCCCceEEEeccCCCCCcCCeEEEeCCCHHHhcCCceEEEEEEeeEECCCCEEEEEE-CCEeccCcccCCc
Confidence 0 112333222211111248899999999985433 789999 555443221111
Q ss_pred EEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCc
Q psy16426 105 PILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGD 141 (194)
Q Consensus 105 ~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~ 141 (194)
....++.+...+.|.|.....+|.|.|+|.+.|....
T Consensus 161 ~~~~~g~~~~~s~l~i~~~~~~~~g~ytC~a~n~~l~ 197 (207)
T 2vol_A 161 IMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGLH 197 (207)
T ss_dssp EECTTSCEEEEEEEEEEHHHHSSCCEEEEEEECTTSG
T ss_pred eECCCCCEEEEEEEEECHHHcCCCCEEEEEEECCCCC
Confidence 1234455666677888877777899999999998654
No 146
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.52 E-value=6.1e-14 Score=116.66 Aligned_cols=130 Identities=18% Similarity=0.217 Sum_probs=86.3
Q ss_pred eeeeCCCcEEEEeeeeccCCceeEEEecCceEE--------------------------------------------Eee
Q psy16426 19 VGAMEGDQMTLECHSEAYPKSINYWTKENGEII--------------------------------------------AQV 54 (194)
Q Consensus 19 ~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~--------------------------------------------v~~ 54 (194)
.....|+.+.|.|.+.|.|.|.|.|++++..+. |..
T Consensus 149 ~~~~~~~~~~L~C~a~G~P~P~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~ 228 (527)
T 3qs9_E 149 YFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDLNQ 228 (527)
T ss_dssp EEEECSSSSCEEEEEEESSCCEEEEEEC-------------CEEECCSEECCCCSSCEEEEEECSSCEEEEECEEEESSS
T ss_pred cEEecCCceEEEEEEceecCCeEEEEECCCCCccccccCCcEEEEeeeeccccCCEEEEEEEEeCCCcccceEEEEEEec
Confidence 344668888999999999999999998765431 001
Q ss_pred CCeEEeccceeEEeeCCeEEEEEEee-ccCCCccEEEecCcEEeeCCCceeE-Ee-cCCceeEEEEEEEeecCCCCCeEE
Q psy16426 55 PPMIWIQNQLVGAMEGDQMTLECHSE-AYPKSINYWTKENGEIIAQGSKYEP-IL-LDNAYKIHMKLTIKAVTKQDFGAY 131 (194)
Q Consensus 55 ~p~i~~~~~~~~~~~g~~~~l~C~~~-~~p~p~v~W~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~L~i~~~~~~d~g~y 131 (194)
+|.+ .+....+.+|+.+.|.|.+. +.|.+.+.|++++ ..+.....+.. .. .+......++|.|.++..+|.|.|
T Consensus 229 ~p~~--~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g-~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y 305 (527)
T 3qs9_E 229 TPQT--TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELEN-KALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYY 305 (527)
T ss_dssp CCCC--SCCEEEECTTSCEEEEEEEEESSSCCCEEEECSS-SCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGCEEE
T ss_pred cCcc--CCCceEEeCCCeEEEEEEEccCCCCeEEEEEECC-EECCCCceeeeeeeccCcceeeEEEEEEccCCcccCeEE
Confidence 1111 23455677899999999996 8899999999944 33332222211 11 111123345799999999999999
Q ss_pred EEEEEcCCCceEEEEEEEcccCC
Q psy16426 132 KCVSKNSLGDTDGSIKLYGKKKK 154 (194)
Q Consensus 132 ~C~a~n~~g~~~~~~~l~v~~~p 154 (194)
+|.|.|. ....+.|.|...|
T Consensus 306 ~C~a~N~---~~~~~~L~V~~~p 325 (527)
T 3qs9_E 306 TCSSSKH---PSQSALVTIVEKG 325 (527)
T ss_dssp EEEETTE---EEEEEEEEEC--C
T ss_pred EEEEEeC---CCceEEEEEEccC
Confidence 9999998 5666777776554
No 147
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.52 E-value=1.4e-13 Score=92.00 Aligned_cols=95 Identities=20% Similarity=0.259 Sum_probs=73.0
Q ss_pred eCCeEEe---ccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeE
Q psy16426 54 VPPMIWI---QNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGA 130 (194)
Q Consensus 54 ~~p~i~~---~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~ 130 (194)
.+|.|.. ......+.+|+.+.|.|.+.|.|.|.+.|++ ++..+. ..++.....+. .+.|.|.++..+|.|.
T Consensus 20 ~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k-~g~~l~-~~~~~~~~~~~----~~~L~i~~~~~~D~G~ 93 (118)
T 2e7c_A 20 EPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTK-GGAPLD-TSRVHVRTSDF----DTVFFVRQAARSDSGE 93 (118)
T ss_dssp EEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEE-TTEECC-CSSCEEEECSS----EEEEEESSCCTTTCEE
T ss_pred cCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEE-CCEECC-CCcEEEEECCC----eEEEEECCCChhcCEE
Confidence 3555543 2356678899999999999999999999999 555443 23333222222 4589999999999999
Q ss_pred EEEEEEcCCCceEEEEEEEcccCC
Q psy16426 131 YKCVSKNSLGDTDGSIKLYGKKKK 154 (194)
Q Consensus 131 y~C~a~n~~g~~~~~~~l~v~~~p 154 (194)
|+|.|.|..|.....+.|.|...|
T Consensus 94 Y~C~a~N~~G~~~~~~~l~V~~~P 117 (118)
T 2e7c_A 94 YELSVQIENMKDTATIRIRVVEKA 117 (118)
T ss_dssp EEEEEECSSCEECCEEEEEEECCC
T ss_pred EEEEEEeCCCeEEEEEEEEEEcCC
Confidence 999999999998889999887765
No 148
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.52 E-value=6.3e-13 Score=100.20 Aligned_cols=93 Identities=20% Similarity=0.256 Sum_probs=60.1
Q ss_pred eEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecC-cE-Ee---e--------CCCceeEEecCCceeEEEEEEEeec
Q psy16426 57 MIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKEN-GE-II---A--------QGSKYEPILLDNAYKIHMKLTIKAV 123 (194)
Q Consensus 57 ~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~-~~-~~---~--------~~~~~~~~~~~~~~~~~~~L~i~~~ 123 (194)
.+...+....+.+|+++.|.|.+.+.+.+.+.|++.. +. .. . ...++..... ....+|.|.++
T Consensus 140 ~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~----~~~~~L~I~~v 215 (256)
T 3umt_A 140 QLTQSPSSLSASLGERVSITCRASQDIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRS----GSDYSLTISSL 215 (256)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEE----TTEEEEEECSC
T ss_pred EEEcCCCeEEEECCCCEEEEEEEecCCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecC----CCEEEEEECCC
Confidence 3444445566788999999999999888899999742 11 11 0 0122221111 12457999999
Q ss_pred CCCCCeEEEEEEEcCCCceE-EEEEEEcccC
Q psy16426 124 TKQDFGAYKCVSKNSLGDTD-GSIKLYGKKK 153 (194)
Q Consensus 124 ~~~d~g~y~C~a~n~~g~~~-~~~~l~v~~~ 153 (194)
..+|.|.|+|.+.|.....- ....|.|.+.
T Consensus 216 ~~~D~G~Y~C~~~~~~~~~fg~gt~L~V~~~ 246 (256)
T 3umt_A 216 ESEDFVDYYCLQYASSPPTFGGGTKLEIKRA 246 (256)
T ss_dssp CGGGCSEEEEEECSSSSCEECCCEEEEEC--
T ss_pred ChhHCEEEEEEEeeCCCcEECCCEEEEEECC
Confidence 99999999999998654322 2466666544
No 149
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.52 E-value=3e-13 Score=113.01 Aligned_cols=139 Identities=14% Similarity=0.258 Sum_probs=98.5
Q ss_pred cCCeeeeeCCCcEEEEeeeeccCCc---eeEEEecCce---------------------------------EE-------
Q psy16426 15 QNQLVGAMEGDQMTLECHSEAYPKS---INYWTKENGE---------------------------------II------- 51 (194)
Q Consensus 15 ~~~~~~v~~G~~v~L~C~~~g~p~~---~v~W~k~~~~---------------------------------l~------- 51 (194)
.|.++.+.+|++++|.|.+.+.+.+ .+.|++++.. |.
T Consensus 6 ~P~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~ 85 (585)
T 2ocw_A 6 GPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQD 85 (585)
T ss_pred CcceeEEecCCcEEEEEeCCCCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEECCCCcc
Confidence 4567889999999999999987644 8999998531 11
Q ss_pred -----------------------EeeCCeEEeccceeEEeeCCeEEEEEEeeccC-CCccEEEecCcEEe---eC-----
Q psy16426 52 -----------------------AQVPPMIWIQNQLVGAMEGDQMTLECHSEAYP-KSINYWTKENGEII---AQ----- 99 (194)
Q Consensus 52 -----------------------v~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p-~p~v~W~~~~~~~~---~~----- 99 (194)
|..+|.+...+....+.+|+.+.|.|.+.+.+ .+.+.|+++++... ..
T Consensus 86 D~G~Y~C~~~n~~~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~ 165 (585)
T 2ocw_A 86 DSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYV 165 (585)
T ss_pred cCEEEEEEcccCCCCceEEEEEEEecCccccCCCccEEEEcCCCEEEEEEecCCCCCccEEEEECCCCCceEEecCCccc
Confidence 44455555555667788999999999998654 56789999544311 11
Q ss_pred ----CCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEcccCC
Q psy16426 100 ----GSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGKKKK 154 (194)
Q Consensus 100 ----~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~p 154 (194)
..+.. ...++......+|.|.++..+|.|.|+|.+.|..|.....+.|.|...+
T Consensus 166 ~~~~~~r~~-~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~ 223 (585)
T 2ocw_A 166 NPNYTGRIR-LDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPE 223 (585)
T ss_pred CccccCcEE-EEeccCCCcEEEEEEccCChhHCeEEEEEeccCCccccceEEEEEccCC
Confidence 11222 1111111223489999999999999999999999988888888886644
No 150
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.52 E-value=1.9e-14 Score=106.87 Aligned_cols=136 Identities=12% Similarity=0.214 Sum_probs=77.9
Q ss_pred ccccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCc-------------------------------eEE--
Q psy16426 5 GQNVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENG-------------------------------EII-- 51 (194)
Q Consensus 5 ~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~-------------------------------~l~-- 51 (194)
+....+.+...+.++.+.+|++++|.|.+.+.+.+.+.|++++. .+.
T Consensus 19 ~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 98 (233)
T 3bqu_C 19 DSGAETTVTQSPASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIE 98 (233)
T ss_dssp ----CCCEEEECSBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC--
T ss_pred ccccceeEEEcCCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEEC
Confidence 44556778887888899999999999999998888999998531 111
Q ss_pred -----------------------------Ee---eCCeEEeccceeEEeeCCeEEEEEEeeccCCC--ccEEEecCcEEe
Q psy16426 52 -----------------------------AQ---VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKS--INYWTKENGEII 97 (194)
Q Consensus 52 -----------------------------v~---~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p--~v~W~~~~~~~~ 97 (194)
|. .+|.+...........|+.+.|.|.+.+.+++ .+.|++ ++...
T Consensus 99 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k-~g~~~ 177 (233)
T 3bqu_C 99 NMLSEDVADYYCLQSDNLPYTFGGGTNLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKI-DGSER 177 (233)
T ss_dssp ---CCCCSEEEEEECSSSSCCBCCCCBC---CCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEE-C----
T ss_pred CCCHHHCEEEEEEEecCCceeecCCEEEEEeCCCCCCEEEEeCCCHHhhcCCceEEEEEEccccCCceEEEEEE-CCeeC
Confidence 11 12333322211112358899999999986543 689999 55443
Q ss_pred eCC-Cce-eE-EecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCc
Q psy16426 98 AQG-SKY-EP-ILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGD 141 (194)
Q Consensus 98 ~~~-~~~-~~-~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~ 141 (194)
... ... .. ...++.+...+.|.|.....+|.|.|+|.+.|....
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 224 (233)
T 3bqu_C 178 QNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 224 (233)
T ss_dssp -CCEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC---
T ss_pred CCCceEecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCCC
Confidence 322 110 00 112333455678999999889999999999997543
No 151
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.52 E-value=8.4e-15 Score=107.22 Aligned_cols=128 Identities=18% Similarity=0.368 Sum_probs=84.6
Q ss_pred EEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecC--ce-----------------------------EE---------
Q psy16426 12 IWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKEN--GE-----------------------------II--------- 51 (194)
Q Consensus 12 ~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~--~~-----------------------------l~--------- 51 (194)
+.. +.++.+.+|++++|.|.+.+.+.+.+.||+++ .. |.
T Consensus 3 v~q-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 81 (212)
T 1nfd_E 3 LIQ-PSSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDE 81 (212)
T ss_dssp EEC-CSEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGC
T ss_pred eEC-CCeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccC
Confidence 444 77788999999999999988888899999852 11 11
Q ss_pred ------Ee----------------------eCCeEEeccceeEEeeCCeEEEEEEeecc-CC-CccEEEecCcEEeeCCC
Q psy16426 52 ------AQ----------------------VPPMIWIQNQLVGAMEGDQMTLECHSEAY-PK-SINYWTKENGEIIAQGS 101 (194)
Q Consensus 52 ------v~----------------------~~p~i~~~~~~~~~~~g~~~~l~C~~~~~-p~-p~v~W~~~~~~~~~~~~ 101 (194)
+. .+|.+........+..|+.+.|.|.+.+. |+ +.+.|++ ++..+....
T Consensus 82 G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k-~g~~~~~~~ 160 (212)
T 1nfd_E 82 AAYYCLSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKA-NGATINDGV 160 (212)
T ss_dssp SEEEEEEEETTTTEEEECCCEEEEEECCCCBCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEE-TTEEECSSC
T ss_pred EEEEEEEEcccCcccccCCceEEEEccCCCCCCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEE-CCeEcCCCe
Confidence 11 11222211111112358899999999987 44 6899999 555544332
Q ss_pred cee-EE-ecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCce
Q psy16426 102 KYE-PI-LLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDT 142 (194)
Q Consensus 102 ~~~-~~-~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~ 142 (194)
... .. ..+. +...+.|.|.++..+|.|.|+|.|.|..+..
T Consensus 161 ~~~~~~~~~~~-~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 202 (212)
T 1nfd_E 161 KTTKPSKQGQN-YMTSSYLSLTADQWKSHNRVSCQVTHEGETV 202 (212)
T ss_dssp BCCCCBCSSSC-EEEEEBCCEEHHHHHTCSCEEEEEECTTTTC
T ss_pred ecCCceecCCC-ceEEEEEEEchhhcCCCCeEEEEEEeCCceE
Confidence 111 01 1222 4445789999999999999999999987653
No 152
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.52 E-value=6.7e-13 Score=99.34 Aligned_cols=127 Identities=12% Similarity=0.124 Sum_probs=83.6
Q ss_pred CeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCc-------------------------------eEE-------
Q psy16426 10 PMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENG-------------------------------EII------- 51 (194)
Q Consensus 10 P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~-------------------------------~l~------- 51 (194)
+.+.+.+.++.+.+|++++|.|.+.+.+.+.+.||+++. .|.
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (242)
T 2znx_A 2 IVLTQSPATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETE 81 (242)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGG
T ss_pred CcEEEcCCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChH
Confidence 456778888899999999999999998889999998421 011
Q ss_pred ------------------------EeeCCe-------------EEeccceeEEeeCCeEEEEEEeeccC--CCccEEEec
Q psy16426 52 ------------------------AQVPPM-------------IWIQNQLVGAMEGDQMTLECHSEAYP--KSINYWTKE 92 (194)
Q Consensus 52 ------------------------v~~~p~-------------i~~~~~~~~~~~g~~~~l~C~~~~~p--~p~v~W~~~ 92 (194)
|..+|. ....+....+.+|+.+.|.|.+.+.+ .+.+.|+++
T Consensus 82 D~G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~ 161 (242)
T 2znx_A 82 DFGMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVTGDSITSDYXSXIRK 161 (242)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEEESSCGGGSCEEEEEE
T ss_pred HCEEEEEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEEEccccCCcceeeEee
Confidence 111111 11122233477899999999998875 478999984
Q ss_pred C-cE-E---ee------------CCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcC
Q psy16426 93 N-GE-I---IA------------QGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNS 138 (194)
Q Consensus 93 ~-~~-~---~~------------~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~ 138 (194)
+ +. + .. ...++.... +. .....+|.|.+++.+|.|.|+|.+.|.
T Consensus 162 ~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~-~~-~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 222 (242)
T 2znx_A 162 FPGNRLEYMGYVSYSGSTYYNPSLKSRISITR-DT-SKNQYYLDLNSVTTEDTATYYCANXDG 222 (242)
T ss_dssp CTTSCEEEEEEECTTSCEEECGGGTTCEEEEE-ET-TTTEEEEEECSCCGGGCEEEEEEETTS
T ss_pred CCCCCcEEEEEEecCCccccCccccCcEEEEe-cC-CCCEEEEEECCCCcCcCEEEEEeccCC
Confidence 3 11 1 00 012222111 00 011358999999999999999999984
No 153
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.52 E-value=1.7e-12 Score=97.07 Aligned_cols=86 Identities=19% Similarity=0.282 Sum_probs=56.6
Q ss_pred cceeEEeeCCeEEEEEEeeccCCCccEEEec--CcEE--e-e--------CCCceeEEecCCceeEEEEEEEeecCCCCC
Q psy16426 62 NQLVGAMEGDQMTLECHSEAYPKSINYWTKE--NGEI--I-A--------QGSKYEPILLDNAYKIHMKLTIKAVTKQDF 128 (194)
Q Consensus 62 ~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~--~~~~--~-~--------~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 128 (194)
+..+.+.+|+.+.|.|.+.+.+.+.++|++. +..+ . . ...++... .+ ....+|.|.++..+|.
T Consensus 142 ~~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~-~~---~~~~~L~I~~v~~~D~ 217 (247)
T 2ghw_B 142 PATLSLSPGERATLSCRASQSVRSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGS-GS---GTDFTLTISRLEPEDF 217 (247)
T ss_dssp CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEE-CS---SSEEEEEECSCCGGGC
T ss_pred CCEEEecCCCcEEEEEEeCCCccceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEe-cC---CCeEEEEECcCCHHHC
Confidence 3445577899999999999998889999983 2211 0 0 01222211 11 1245899999999999
Q ss_pred eEEEEEEEcCCCceE-EEEEEEcc
Q psy16426 129 GAYKCVSKNSLGDTD-GSIKLYGK 151 (194)
Q Consensus 129 g~y~C~a~n~~g~~~-~~~~l~v~ 151 (194)
|.|+|.+.|..+... ....|.|.
T Consensus 218 G~Y~C~a~~~~~~~~g~~t~l~V~ 241 (247)
T 2ghw_B 218 AVYYCQQRSNWPPTFGQGTKVEVK 241 (247)
T ss_dssp EEEEEEECSSSSCEECCCEEEEEC
T ss_pred EEEEEEEccCCCceEcCCEEEEEC
Confidence 999999998643322 23455554
No 154
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.51 E-value=3.5e-14 Score=108.42 Aligned_cols=134 Identities=18% Similarity=0.186 Sum_probs=96.3
Q ss_pred ccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCce------------EE-----------------------
Q psy16426 7 NVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGE------------II----------------------- 51 (194)
Q Consensus 7 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~------------l~----------------------- 51 (194)
+.+|.|...+.++.+.+|++++|.|.+.+. +.|++++.. +.
T Consensus 2 ~~~P~i~~~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~ 77 (292)
T 4dkd_C 2 GSIPVIEPSVPELVVKPGATVTLRCVGNGS----VEWDGPPSPHWTLYSDGSSSILSTNNATFQNTGTYRCTEPGDPLGG 77 (292)
T ss_dssp --CCEEESCCSSCEECTTCCEEEEEECSSC----CCBCCCCCSSCEECCBTTEEEEEESSCCGGGCSCEEECCCC----C
T ss_pred CCCceecCCCCeEEEcCCCcEEEEEcCCCc----eEEccCCCCceEEeccCceEEEEEcccccccCEEEEEEEccCCCCc
Confidence 478999999988999999999999999874 889865321 11
Q ss_pred -------EeeCCe-EEeccceeEEeeCCeEEEEEEeeccCC--CccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEe
Q psy16426 52 -------AQVPPM-IWIQNQLVGAMEGDQMTLECHSEAYPK--SINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIK 121 (194)
Q Consensus 52 -------v~~~p~-i~~~~~~~~~~~g~~~~l~C~~~~~p~--p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~ 121 (194)
|..+|. +........+.+|+.+.|.|.+.+ +. +.+.|+++++........+. .... ..|.|.
T Consensus 78 ~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~~~~~~--~~~~-----~~L~i~ 149 (292)
T 4dkd_C 78 SAAIHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMRHTNYS--FSPW-----HGFTIH 149 (292)
T ss_dssp CEEECCEECCSSCCEEESCSEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCSSCCEE--CCSS-----SCCEET
T ss_pred ceEEEEEEcCccccccccCCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCccccCCccc--ccCC-----ceEEEC
Confidence 333443 234455677889999999999987 44 77999986555544433332 1111 258999
Q ss_pred ecCCCCCeEEEEEEEcCCCceEE-EEEEEccc
Q psy16426 122 AVTKQDFGAYKCVSKNSLGDTDG-SIKLYGKK 152 (194)
Q Consensus 122 ~~~~~d~g~y~C~a~n~~g~~~~-~~~l~v~~ 152 (194)
++..+|.|.|+|.+.|..+.... .+.|.|..
T Consensus 150 ~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~ 181 (292)
T 4dkd_C 150 RAKFIQSQDYQCSALMGGRKVMSISIRLKVQK 181 (292)
T ss_dssp TCCGGGCSEEEEEECSTTSCEECCCEEEEEEC
T ss_pred CCCHHHCeEEEEEEEeCCCceeEEEEEEEEeC
Confidence 99999999999999998776543 67777665
No 155
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.51 E-value=1.4e-13 Score=104.49 Aligned_cols=142 Identities=13% Similarity=0.165 Sum_probs=89.6
Q ss_pred cccccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceEE--------------------------------
Q psy16426 4 QGQNVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEII-------------------------------- 51 (194)
Q Consensus 4 ~~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~-------------------------------- 51 (194)
.++..+|.|...+. ..+.+|++|+|.|.+.+ +.+.+.|++++..+.
T Consensus 2 ~g~~~kP~i~~~P~-~~V~~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C 79 (257)
T 1b6u_A 2 EGVHRKPSLLAHPG-PLVKSEETVILQCWSDV-RFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRC 79 (257)
T ss_dssp ---CCCCEECCBSC-SEEESSCCEEEEEEESS-CCSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEE
T ss_pred CCcCCCCEEEEcCC-CEecCCCCEEEEEecCC-CCcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEE
Confidence 35678899988776 67889999999999875 467899999865320
Q ss_pred -Ee-----------------------eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEe
Q psy16426 52 -AQ-----------------------VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPIL 107 (194)
Q Consensus 52 -v~-----------------------~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~ 107 (194)
.. .+|.+...+. ..+.+|+.+.|.|.+.+. .+.+.|++++..+.... ... ..
T Consensus 80 ~a~~~~~~~~~s~~S~~~~L~V~~~~~~P~l~~~p~-~~V~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~~~-~~~-~~ 155 (257)
T 1b6u_A 80 YGSVTHSPYQLSAPSDPLDIVITGLYEKPSLSAQPG-PTVLAGESVTLSCSSRSS-YDMYHLSREGEAHERRF-SAG-PK 155 (257)
T ss_dssp EEECSSCTTSCCCCCCCEEEEEECSSCCCEEECSSC-TTCBTTCEEEEEEECSSC-CSEEEEEETTSSCEECC-BCB-CC
T ss_pred eEeccCCCccccccCCCEEEecccCCCCcceEccCC-CccCCCCEEEEEEeCCCC-CcEEEEEECCcccCccc-ccc-cc
Confidence 10 0112221111 235689999999998875 46788999443332211 110 11
Q ss_pred cCCceeEEEEEEEeecCCCCCeEEEEEEEcCCC-----ceEEEEEEEcccCCC
Q psy16426 108 LDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLG-----DTDGSIKLYGKKKKK 155 (194)
Q Consensus 108 ~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g-----~~~~~~~l~v~~~p~ 155 (194)
... .....|.|.+++ |.|.|+|.+.|... ..+..+.|.|...|.
T Consensus 156 ~~~--~~~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~p~ 204 (257)
T 1b6u_A 156 VNG--TFQADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNPS 204 (257)
T ss_dssp SSS--CCBEEEEEEECC--SCEEEEEEEECSSCTTBBCCCCCCEEECCBCCC-
T ss_pred cCC--ceeEEEEecccc--cCEEEEEEEEcCCCCcccccCCCCEEEEEeccCC
Confidence 111 114589999998 99999999997532 223457777776654
No 156
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.51 E-value=5.3e-14 Score=90.03 Aligned_cols=90 Identities=20% Similarity=0.283 Sum_probs=69.7
Q ss_pred CCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecC-cEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEE
Q psy16426 55 PPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKEN-GEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKC 133 (194)
Q Consensus 55 ~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~-~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C 133 (194)
+|.|........+..|+.+.|.|.+.|.|.|.+.|++++ +..+....... ... ..+.|.|.++..+|.|.|+|
T Consensus 2 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~--~~~----~~~~L~i~~~~~~D~G~Y~C 75 (93)
T 1wit_A 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVD--AKS----STTSIFFPSAKRADSGNYKL 75 (93)
T ss_dssp CCEECCCCCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTTSEEE--EET----TEEEEECTTBCGGGCEEEEE
T ss_pred CCeEEcCCCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCcEEEE--ecC----CEEEEEECCCChhcCEEEEE
Confidence 566665666777889999999999999999999999944 14443322211 111 14689999999999999999
Q ss_pred EEEcCCCceEEEEEEEc
Q psy16426 134 VSKNSLGDTDGSIKLYG 150 (194)
Q Consensus 134 ~a~n~~g~~~~~~~l~v 150 (194)
.|.|..|.....+.|.|
T Consensus 76 ~a~N~~G~~~~~~~l~V 92 (93)
T 1wit_A 76 KVKNELGEDEAIFEVIV 92 (93)
T ss_dssp EEEETTEEEEEEEEEEE
T ss_pred EEEcCCCeEEEEEEEEE
Confidence 99999998888888776
No 157
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.51 E-value=9.8e-13 Score=99.13 Aligned_cols=93 Identities=23% Similarity=0.322 Sum_probs=57.6
Q ss_pred ccceeEEeeCCeEEEEEEeeccCCC-ccEEEecC-cE-E---eeC--------CCceeEEecCCceeEEEEEEEeecCCC
Q psy16426 61 QNQLVGAMEGDQMTLECHSEAYPKS-INYWTKEN-GE-I---IAQ--------GSKYEPILLDNAYKIHMKLTIKAVTKQ 126 (194)
Q Consensus 61 ~~~~~~~~~g~~~~l~C~~~~~p~p-~v~W~~~~-~~-~---~~~--------~~~~~~~~~~~~~~~~~~L~i~~~~~~ 126 (194)
.+....+.+|+.+.|.|.+.+.+.+ .+.|++.. +. . ... ..++..... ....+|.|.+++.+
T Consensus 147 ~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~----~~~~~L~I~~v~~~ 222 (257)
T 3gkz_A 147 SPAIMSASPGEKVTLTCSASSSVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGS----GTSYSLTISSMEAE 222 (257)
T ss_dssp SCSEEEECTTCCEEEEEEESSCCCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE----TTEEEEEESSCCGG
T ss_pred CCceEEEeCCCcEEEEEEEccCccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecC----CCEEEEEECCCChH
Confidence 3445667889999999999988777 89999732 11 1 100 112221111 12457999999999
Q ss_pred CCeEEEEEEEcCCCceE-EEEEEEcccCCCCC
Q psy16426 127 DFGAYKCVSKNSLGDTD-GSIKLYGKKKKKKK 157 (194)
Q Consensus 127 d~g~y~C~a~n~~g~~~-~~~~l~v~~~p~~p 157 (194)
|.|.|+|.+.+.....- ....|.|...+..|
T Consensus 223 D~G~Y~C~~~~~~~~~fg~gt~l~v~~~~~~~ 254 (257)
T 3gkz_A 223 DAASYFCHQWSSFPFTFGSGTKLEIKRAPHHH 254 (257)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEECCC----
T ss_pred HCEEEEEEEccCCceEEcCCEEEEEEeCCCCC
Confidence 99999999987543222 23566666555544
No 158
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.50 E-value=3.9e-14 Score=114.79 Aligned_cols=121 Identities=11% Similarity=0.103 Sum_probs=90.2
Q ss_pred EEEcCCeeeeeCCCcEEEEeeeeccCCcee-----EEEecCceE--------E---------------------------
Q psy16426 12 IWIQNQLVGAMEGDQMTLECHSEAYPKSIN-----YWTKENGEI--------I--------------------------- 51 (194)
Q Consensus 12 ~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v-----~W~k~~~~l--------~--------------------------- 51 (194)
|.+.|.+..+.+|++++|.|.+.+ |.+.+ .|++++..+ .
T Consensus 2 i~~~P~~~~v~~G~~v~L~C~~~g-p~p~~~~~~~~w~k~~~~~~~~~~~~l~i~~v~~d~gY~C~a~~~~~~~~~~~~l 80 (450)
T 1z7z_I 2 TSVSPSKVILPRGGSVLVTCSTSC-DQPMLLGIETPLPKKELLLPGNNRKVYELSNVQEDSQPMCYSNCPDGQSTAKTFL 80 (450)
T ss_dssp CEEESSEEEEETTEEEEEEEECCS-SCCCEEEECSSSCEEECCSSTTTEEEEEEEEECSCBCCEEEEEETTEEEEEECEE
T ss_pred cccCCCceEEecCCcEEEEEEccC-CCcccccccceeeecceEecCCCceEEEEEecccCCeeEEEEeCCCCcceeEEEE
Confidence 456788889999999999999999 88888 899976511 0
Q ss_pred -EeeCCeEE-eccceeEEeeCCeEEEEEEeeccCCC---ccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCC
Q psy16426 52 -AQVPPMIW-IQNQLVGAMEGDQMTLECHSEAYPKS---INYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQ 126 (194)
Q Consensus 52 -v~~~p~i~-~~~~~~~~~~g~~~~l~C~~~~~p~p---~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 126 (194)
|..+|.+. ..+....+.+|+.+.|.|.+.+.+++ .+.|++ ++..+..... ..+ ...+.|.|.++..+
T Consensus 81 ~V~~~P~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k-~g~~l~~~~~----~~~---~~~~~L~i~~~~~~ 152 (450)
T 1z7z_I 81 TVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLR-GEKELKREPA----VGE---PAEVTTTVLVRRDH 152 (450)
T ss_dssp EEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEE-TTEEEEEEEC----CTT---TEEEEEEEECCSSC
T ss_pred EEEeCCCcceecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEee-CCEEeecccc----ccc---ccceEEEEEeeccc
Confidence 34455443 34455667899999999999998887 889999 4544332110 111 12458999999999
Q ss_pred CCeEEEEEEEcCCCc
Q psy16426 127 DFGAYKCVSKNSLGD 141 (194)
Q Consensus 127 d~g~y~C~a~n~~g~ 141 (194)
|.|.|+|.+.|..|.
T Consensus 153 d~G~Y~C~a~n~~g~ 167 (450)
T 1z7z_I 153 HGANFSCRTELDLRP 167 (450)
T ss_dssp SSCEEEEEEEEECGG
T ss_pred cCceEEEEEEcccCC
Confidence 999999999998764
No 159
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.50 E-value=3.7e-13 Score=101.62 Aligned_cols=129 Identities=16% Similarity=0.299 Sum_probs=87.1
Q ss_pred CeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecC--c--------------------------------eEE----
Q psy16426 10 PMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKEN--G--------------------------------EII---- 51 (194)
Q Consensus 10 P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~--~--------------------------------~l~---- 51 (194)
..++..+.++.+.+|++|+|.|.+.+.+.+.+.||+.. . .|.
T Consensus 4 ~~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v 83 (256)
T 3tf7_C 4 QSVTQPDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASV 83 (256)
T ss_dssp CEEECSCSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSC
T ss_pred cEEEecCceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCC
Confidence 45677778889999999999999999999999999832 0 011
Q ss_pred ------------------------------Eee--------------------CCeEEeccceeEEeeCCeEEEEEEeec
Q psy16426 52 ------------------------------AQV--------------------PPMIWIQNQLVGAMEGDQMTLECHSEA 81 (194)
Q Consensus 52 ------------------------------v~~--------------------~p~i~~~~~~~~~~~g~~~~l~C~~~~ 81 (194)
|.. +|.+...+....+.+|+.+.|.|.+.+
T Consensus 84 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~ 163 (256)
T 3tf7_C 84 HRSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVTGENVTLSCRQTN 163 (256)
T ss_dssp CGGGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSEEEEETTCCEEECEEECS
T ss_pred CcccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeCCCcEEEEEEcCC
Confidence 111 223334445556678999999999987
Q ss_pred cCCCccEEEecCcE----Eee------------CCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCce
Q psy16426 82 YPKSINYWTKENGE----IIA------------QGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDT 142 (194)
Q Consensus 82 ~p~p~v~W~~~~~~----~~~------------~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~ 142 (194)
. .+.+.|++.... ... ...++...... ....+|.|.+++.+|.|.|+|.+.|..|..
T Consensus 164 ~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~~ 236 (256)
T 3tf7_C 164 S-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTT---QEDFFLTLESASPSQTSLYFCASSDAPGQL 236 (256)
T ss_dssp C-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCS---SSBCEEEESSCCGGGCEEEEEEEEEETTEE
T ss_pred C-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCC---CCeEEEEECCCCHHHCEEEEEEecCCCCcc
Confidence 6 678999973211 100 01111111001 113489999999999999999999986643
No 160
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.50 E-value=5e-14 Score=111.70 Aligned_cols=130 Identities=17% Similarity=0.252 Sum_probs=90.7
Q ss_pred ccCCeEEEcCCeeee---eCCCcEEEEeeeeccCCceeEEEecCceEE--------------------------------
Q psy16426 7 NVPPMIWIQNQLVGA---MEGDQMTLECHSEAYPKSINYWTKENGEII-------------------------------- 51 (194)
Q Consensus 7 ~~~P~~~~~~~~~~v---~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~-------------------------------- 51 (194)
..+|.|...|.+..+ .+|++++|.|.+.|.|.+.+.|++++..+.
T Consensus 2 ~~~P~~~~~p~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~k~g~~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a 81 (382)
T 1cs6_A 2 SYGPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVAGDLVISNPVKAKDAGSYQCVA 81 (382)
T ss_dssp CEEEEEEECCCCEEEETTCSCCEEEECCEEEEESCCEEEEEETTEECCCSTTSSEEEETTEEEEESCCHHHHCEEEEEEE
T ss_pred CCCCEEEECCCcEEEecCCCCCcEEEEEEecCCCCCEEEEEECCEECCcCCCccEEeeCCeEEEecccccccCEEEEEEE
Confidence 458999999988776 789999999999999999999999875431
Q ss_pred ---------------EeeCCeEE-eccceeEEeeCCeEEEEEEe-eccCCCccEEEecCcEEe-eCCCceeEEecCCcee
Q psy16426 52 ---------------AQVPPMIW-IQNQLVGAMEGDQMTLECHS-EAYPKSINYWTKENGEII-AQGSKYEPILLDNAYK 113 (194)
Q Consensus 52 ---------------v~~~p~i~-~~~~~~~~~~g~~~~l~C~~-~~~p~p~v~W~~~~~~~~-~~~~~~~~~~~~~~~~ 113 (194)
|...+.+. .......+.+|+.+.|.|.+ .+.|.+.+.|++++.... ....+. .....
T Consensus 82 ~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~--~~~~~--- 156 (382)
T 1cs6_A 82 TNARGTVVSREASLRFGFLQEFSAEERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRR--FVSQT--- 156 (382)
T ss_dssp EETTEEEECCCEEEEEEEECCCCSSCCCCEEEETTSCEEECCCCCSEESCCEEEEEESSTTCBCCCCSSE--EECTT---
T ss_pred EcCCcEEEecceEEEeeccccccccCCCceEEecCCcEEEEeCCCCCCCCcEEEEEECCCccccccCceE--EEecC---
Confidence 11111111 01234557789999999985 456778899999543322 122222 11111
Q ss_pred EEEEEEEeecCCCCCeEEEEEEEcCCCce
Q psy16426 114 IHMKLTIKAVTKQDFGAYKCVSKNSLGDT 142 (194)
Q Consensus 114 ~~~~L~i~~~~~~d~g~y~C~a~n~~g~~ 142 (194)
.+.|.|.++..+|.|.|+|.+.|..|..
T Consensus 157 -~~~L~i~~~~~~d~G~Y~C~~~n~~g~~ 184 (382)
T 1cs6_A 157 -TGNLYIAKTEASDLGNYSCFATSHIDFI 184 (382)
T ss_dssp -TCCEEESSCCGGGCEEEEEEEEEEETTE
T ss_pred -ceEEEEEeeCcccCeeEEEEEEEccccc
Confidence 1379999999999999999999987543
No 161
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.50 E-value=7.7e-14 Score=90.22 Aligned_cols=91 Identities=23% Similarity=0.365 Sum_probs=71.0
Q ss_pred EeeCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEE
Q psy16426 52 AQVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAY 131 (194)
Q Consensus 52 v~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y 131 (194)
+..+|.+...+....+.+|+.+.|.|.+.+.|.|.+.|++ ++......... .... ...|.|.++..+|.|.|
T Consensus 8 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~-~g~~~~~~~~~---~~~~----~~~L~i~~v~~~D~G~Y 79 (99)
T 2yr3_A 8 MEVAPSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLL-NGQPIQYARST---CEAG----VAELHIQDALPEDHGTY 79 (99)
T ss_dssp CCEEEEEEECCCCEEECTTCCEEEECEEEEESCCCCEEEE-SSSBCSSCCCE---EETT----EEEEEECSCCTTCCBCE
T ss_pred cccCCceeecCCCCEEeCCCeEEEEEEEeeeCCCeEEEEE-CCEECcccceE---eeCC----eEEEEECCCChhhCEEE
Confidence 3457777777777888999999999999999999999999 44443322211 1111 46899999999999999
Q ss_pred EEEEEcCCCceEEEEEEEc
Q psy16426 132 KCVSKNSLGDTDGSIKLYG 150 (194)
Q Consensus 132 ~C~a~n~~g~~~~~~~l~v 150 (194)
+|.+.|..|.....+.|.|
T Consensus 80 ~C~a~N~~g~~~~~~~l~V 98 (99)
T 2yr3_A 80 TCLAENALGQVSCSAWVTV 98 (99)
T ss_dssp EEEEECSSCEEEEECCEEE
T ss_pred EEEEEECCCeEEEEEEEEE
Confidence 9999999998887777765
No 162
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.50 E-value=7e-13 Score=85.34 Aligned_cols=91 Identities=25% Similarity=0.341 Sum_probs=71.8
Q ss_pred EEeccceeEEeeCCeEEEEEEeecc-CCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEE
Q psy16426 58 IWIQNQLVGAMEGDQMTLECHSEAY-PKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSK 136 (194)
Q Consensus 58 i~~~~~~~~~~~g~~~~l~C~~~~~-p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~ 136 (194)
+...+....+.+|+.+.|.|.+.+. |.|.+.|++ ++..+....++.....+. .+.|.|.++..+|.|.|+|.+.
T Consensus 4 v~~~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~----~~~L~i~~v~~~D~G~Y~C~a~ 78 (97)
T 2bk8_A 4 VSGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYF-GVRQLENSEKYEITYEDG----VAILYVKDITKLDDGTYRCKVV 78 (97)
T ss_dssp EECCCCCEEECTTCCEEEEEEEESCCTTCEEEEEE-TTEECCSSSSEEEEEETT----EEEEEECSCCGGGCEEEEEEEE
T ss_pred eeccCcCEEEcCCCcEEEEEEEeccCCCCEEEEEE-CCEECcCCCCEEEEEcCC----eEEEEEecCChhhCeEEEEEEE
Confidence 3445566778899999999999997 889999999 555555555554323222 4589999999999999999999
Q ss_pred cCCCceEEEEEEEcccC
Q psy16426 137 NSLGDTDGSIKLYGKKK 153 (194)
Q Consensus 137 n~~g~~~~~~~l~v~~~ 153 (194)
|..|...+.+.|.|.+.
T Consensus 79 n~~g~~~~~~~l~V~~~ 95 (97)
T 2bk8_A 79 NDYGEDSSYAELFVKGV 95 (97)
T ss_dssp CSSCEEEEEEEEEETTT
T ss_pred CCCCeEeEEEEEEEEec
Confidence 99999998888887653
No 163
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.50 E-value=7.4e-14 Score=102.07 Aligned_cols=132 Identities=11% Similarity=0.261 Sum_probs=86.4
Q ss_pred eEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecC--ce-----------------------------EE--------
Q psy16426 11 MIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKEN--GE-----------------------------II-------- 51 (194)
Q Consensus 11 ~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~--~~-----------------------------l~-------- 51 (194)
.++..+ .+.+.+|++++|.|.+. +.+.+.||+++ .. |.
T Consensus 3 ~v~~~~-~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 79 (211)
T 3tv3_L 3 ALTQPP-SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDD 79 (211)
T ss_dssp CCBCCS-EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGG
T ss_pred eEEeCc-eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhH
Confidence 444455 67899999999999998 78899999931 10 11
Q ss_pred ------------------------Ee----eCCeEEeccceeEEeeCCeEEEEEEeeccC--CCccEEEecCcEEeeCCC
Q psy16426 52 ------------------------AQ----VPPMIWIQNQLVGAMEGDQMTLECHSEAYP--KSINYWTKENGEIIAQGS 101 (194)
Q Consensus 52 ------------------------v~----~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p--~p~v~W~~~~~~~~~~~~ 101 (194)
|. .+|.+...+.......|+.+.|.|.+.+.+ .+.+.|++ ++..+....
T Consensus 80 ~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k-~g~~l~~~~ 158 (211)
T 3tv3_L 80 EAVYYCGSLVGNWDVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKA-DSSPVKAGV 158 (211)
T ss_dssp CEEEEEEEEETTTEEEECCCEEEEECCSCCBCCEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEE-TTEEECTTE
T ss_pred CEEEEEEEecCCCceeECCCceEEEeCCCCcCCeeEecCCchhhhcCCCeEEEEEeeeecCCCeEEEEEE-CCeecCCCc
Confidence 11 122222222222223589999999998864 46788999 555543321
Q ss_pred cee--EEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEEE
Q psy16426 102 KYE--PILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSI 146 (194)
Q Consensus 102 ~~~--~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~ 146 (194)
... ....++.+...+.|.|.++..+|.|.|+|.+.|..+....++
T Consensus 159 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~~~~ 205 (211)
T 3tv3_L 159 ETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTV 205 (211)
T ss_dssp EECCCEECTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEEEEE
T ss_pred ccCCceECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEEeec
Confidence 111 112334455567899999988899999999999887665554
No 164
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.50 E-value=3.5e-14 Score=112.89 Aligned_cols=132 Identities=24% Similarity=0.324 Sum_probs=93.3
Q ss_pred ccccCCeEEEcCCeeeeeCCCcEEEEeeeec-cCCceeEEEecCceEE-------------------------------E
Q psy16426 5 GQNVPPMIWIQNQLVGAMEGDQMTLECHSEA-YPKSINYWTKENGEII-------------------------------A 52 (194)
Q Consensus 5 ~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g-~p~~~v~W~k~~~~l~-------------------------------v 52 (194)
-|..||.|...+.++.+.+|++++|.|.+.+ .|.+.+.|++++..+. +
T Consensus 2 ~v~~~P~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a 81 (395)
T 1bih_A 2 PVDKYPVLKDQPAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRKDEGSLVFLRPQASDEGHYQCFA 81 (395)
T ss_dssp ---CCCEECCCCSEEEEETTSCEEECCCEESCCSSCEEEEEESSSBCCTTTTTEEECTTSCCEEESSCCGGGCEEEEEEE
T ss_pred CcCCCCEeecCCCceEEeCCCEEEEEEEEecCCCCceEEEEECCcCcccccceEEEecCCceEEEecCCCCCCcEEEEEE
Confidence 3678999999999999999999999999998 8899999999875431 0
Q ss_pred e------------------eCCeEEeccceeEEeeCCeEEEEEEe-eccCCCccEEEecCc--EEeeC----CCceeEEe
Q psy16426 53 Q------------------VPPMIWIQNQLVGAMEGDQMTLECHS-EAYPKSINYWTKENG--EIIAQ----GSKYEPIL 107 (194)
Q Consensus 53 ~------------------~~p~i~~~~~~~~~~~g~~~~l~C~~-~~~p~p~v~W~~~~~--~~~~~----~~~~~~~~ 107 (194)
. ..|.+ .+....+.+|+.+.|.|.+ .+.|.+.+.|++++. ..... ..++ ..
T Consensus 82 ~n~~g~~~s~~~~l~v~~~~~p~~--~~~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~--~~ 157 (395)
T 1bih_A 82 ETPAGVASSRVISFRKTYLIASPA--KTHEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRI--TA 157 (395)
T ss_dssp EETTEEEECCCEEEEEEEEECCCC--EEEEECCBTTEEEEECCCCCEEESCCEEEEEEEETTSCGGGCCCCCCTTE--EE
T ss_pred EeCCCeEEeEEEEEEEEEeecCCc--CCcceeeeeCCcEEEEecCCCCCCCCeEEEEecCCCcCcccccccccccE--EE
Confidence 0 01111 1123345689999999995 788889999998431 11111 1122 11
Q ss_pred cCCceeEEEEEEEeecCCCCCe---EEEEEEEcCCCceEEE
Q psy16426 108 LDNAYKIHMKLTIKAVTKQDFG---AYKCVSKNSLGDTDGS 145 (194)
Q Consensus 108 ~~~~~~~~~~L~i~~~~~~d~g---~y~C~a~n~~g~~~~~ 145 (194)
... +.|.|.++..+|.| .|+|.+.|..|.....
T Consensus 158 ~~~-----~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~ 193 (395)
T 1bih_A 158 GPD-----GNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVV 193 (395)
T ss_dssp CTT-----SCEEEEEECGGGCCSSEEEEEEEECTTCSSCEE
T ss_pred cCC-----CcEEEEEEeeccCCCceEEEEEEEecccceEEE
Confidence 111 27899999999999 9999999998875543
No 165
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.50 E-value=1.5e-12 Score=98.36 Aligned_cols=88 Identities=20% Similarity=0.263 Sum_probs=56.5
Q ss_pred cceeEEeeCCeEEEEEEeeccCCC-----ccEEEec--CcEEe---eC--------CCceeEEecCCceeEEEEEEEeec
Q psy16426 62 NQLVGAMEGDQMTLECHSEAYPKS-----INYWTKE--NGEII---AQ--------GSKYEPILLDNAYKIHMKLTIKAV 123 (194)
Q Consensus 62 ~~~~~~~~g~~~~l~C~~~~~p~p-----~v~W~~~--~~~~~---~~--------~~~~~~~~~~~~~~~~~~L~i~~~ 123 (194)
+....+.+|+.+.|.|.+.+.+.+ .+.|++. +..+. .. ..++..... ....+|.|.++
T Consensus 128 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~----~~~~~L~I~~v 203 (256)
T 1nqb_A 128 PLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGS----GTDFTLKISRV 203 (256)
T ss_dssp CSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEE----TTEEEEEESSC
T ss_pred CcEEEEecCCcEEEEeEecCcccccccceEEEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEcc----CCEEEEEECCC
Confidence 344557789999999999988765 8999983 22221 00 122221111 12458999999
Q ss_pred CCCCCeEEEEEEEcCCCce-EEEEEEEcccC
Q psy16426 124 TKQDFGAYKCVSKNSLGDT-DGSIKLYGKKK 153 (194)
Q Consensus 124 ~~~d~g~y~C~a~n~~g~~-~~~~~l~v~~~ 153 (194)
..+|.|.|+|.+.|..... .....|.|...
T Consensus 204 ~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~~ 234 (256)
T 1nqb_A 204 EAEDLGVYYCFQGSHVPYTFGGGTKLEIKRA 234 (256)
T ss_dssp CGGGCEEEEEEECSSSSCEECCCEEEEECC-
T ss_pred ChHHCEEEEEEEccCCceEECCCEEEEEECC
Confidence 9999999999999854322 22345666443
No 166
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.50 E-value=9.2e-14 Score=91.34 Aligned_cols=93 Identities=18% Similarity=0.379 Sum_probs=74.4
Q ss_pred eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEE
Q psy16426 54 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKC 133 (194)
Q Consensus 54 ~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C 133 (194)
.+|.|...+..+.+.+|+.+.|.|.+.|.|.|.+.|++ ++..+....++....... .++|.|.++..+|.|.|+|
T Consensus 13 ~~~~i~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k-~g~~l~~~~~~~~~~~~~----~~~L~I~~v~~~D~G~Y~C 87 (106)
T 1nct_A 13 LAARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLR-KGQVLSTSARHQVTTTKY----KSTFEISSVQASDEGNYSV 87 (106)
T ss_dssp CCCEEEECCCCEEESSSSCEECCEEEECSSCCBCCBCS-SSSCCTTCSSEEEEECSS----EEEEEECCCCSSCCSEEEE
T ss_pred CCCEEEECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEE-CCEECCCCCCEEEEECCC----EEEEEECcCCchhCEEEEE
Confidence 46677777788889999999999999999999999999 454444444444322221 4699999999999999999
Q ss_pred EEEcCCCceEEEEEEEcc
Q psy16426 134 VSKNSLGDTDGSIKLYGK 151 (194)
Q Consensus 134 ~a~n~~g~~~~~~~l~v~ 151 (194)
.+.|..|.....+.|.|.
T Consensus 88 ~a~N~~G~~~~~~~l~V~ 105 (106)
T 1nct_A 88 VVENSEGKQEAEFTLTIQ 105 (106)
T ss_dssp CCBCSSCBCCEEEEEEEC
T ss_pred EEEeCCCeEEEEEEEEEE
Confidence 999999998888888774
No 167
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.50 E-value=5.1e-14 Score=111.79 Aligned_cols=141 Identities=17% Similarity=0.266 Sum_probs=98.2
Q ss_pred cccCCeEEEcCCeeeeeCCCcEEEEeeeeccCC---ceeEEEecCceEE-------------------------------
Q psy16426 6 QNVPPMIWIQNQLVGAMEGDQMTLECHSEAYPK---SINYWTKENGEII------------------------------- 51 (194)
Q Consensus 6 v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~---~~v~W~k~~~~l~------------------------------- 51 (194)
+..+|.+...+....+.+|++++|.|.+.+.+. +.+.|++++..+.
T Consensus 100 v~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~ 179 (388)
T 2v5m_A 100 AVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDGKYLVLPSGELHIREVGPEDGYKS 179 (388)
T ss_dssp EECCCCCCCBCCCEEEETTSCEEECCBCCTTTTTTEEEEEEEETTCCEECSSSCBTTTEEECTTSCEEESSCCGGGGGCC
T ss_pred EccccccccCccceeeecCCcEEEEEECcCCCCCCcceEEEEeCCCcccccccCCCCcEEEccCCcEEEecCCccccCee
Confidence 345666666677788999999999999988643 7899999875431
Q ss_pred ----EeeC--C---------eEEe--------------ccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEe-----
Q psy16426 52 ----AQVP--P---------MIWI--------------QNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEII----- 97 (194)
Q Consensus 52 ----v~~~--p---------~i~~--------------~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~----- 97 (194)
+... . .+.+ ......+.+|+.+.|.|.+.+.|.|.+.|++++....
T Consensus 180 Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~ 259 (388)
T 2v5m_A 180 YQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCPAQGFPAPSFRWYKFIEGTTRKQAV 259 (388)
T ss_dssp EEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSCCCCEEEETTSCEEECCCCEEESCCEEEEEEECTTSSCEEEC
T ss_pred EEEEeccCCCCceeeccccceEEEecCCcCCCCcCccccCCceEEeeCCcEEEEEECCCCCCCEEEEEecCCCCcccccc
Confidence 0000 0 0100 0122346679999999999999999999998532211
Q ss_pred eCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEcccCC
Q psy16426 98 AQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGKKKK 154 (194)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~p 154 (194)
....+.. ...+.|.|.++..+|.|.|+|.|.|..|.....+.|.|..+|
T Consensus 260 ~~~~~~~--------~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 308 (388)
T 2v5m_A 260 VLNDRVK--------QVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPL 308 (388)
T ss_dssp CCSSSEE--------EETTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEE
T ss_pred cccCcee--------cccCEEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEeCCC
Confidence 1111111 112389999999999999999999999988888888776543
No 168
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.49 E-value=1.2e-13 Score=101.10 Aligned_cols=131 Identities=15% Similarity=0.223 Sum_probs=80.5
Q ss_pred CeEEEcCCeeee--eCCCcEEEEeeeeccC----CceeEEEecCceEE--------------------------------
Q psy16426 10 PMIWIQNQLVGA--MEGDQMTLECHSEAYP----KSINYWTKENGEII-------------------------------- 51 (194)
Q Consensus 10 P~~~~~~~~~~v--~~G~~v~L~C~~~g~p----~~~v~W~k~~~~l~-------------------------------- 51 (194)
|.+.+.+....+ .+|++++|.|.+.|.+ .+.|.|++++..+.
T Consensus 2 P~v~~~pps~~~~~~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g 81 (207)
T 1l6x_A 2 PSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGK 81 (207)
T ss_dssp CEEEEECCCHHHHHCTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTC
T ss_pred CeEEEeCcChHHheecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCc
Confidence 555555544434 7899999999999875 24999999874321
Q ss_pred -----Ee-------------------eCCeEEeccceeEEeeCCeEEEEEEeeccCC--CccEEEecCcEEeeCCCceeE
Q psy16426 52 -----AQ-------------------VPPMIWIQNQLVGAMEGDQMTLECHSEAYPK--SINYWTKENGEIIAQGSKYEP 105 (194)
Q Consensus 52 -----v~-------------------~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~--p~v~W~~~~~~~~~~~~~~~~ 105 (194)
+. .+|.+.+.........|..+.|.|.+.|.++ +.+.|++ ++..+........
T Consensus 82 ~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k-~g~~~~~~~~~~~ 160 (207)
T 1l6x_A 82 EYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWES-NGQPENNYKTTPP 160 (207)
T ss_dssp CEEEEEECTTSSSCEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEE-TTEEECCEEECCC
T ss_pred eEEEEEEcCcCCcceEEEeccCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeCeECCCeEEEEEE-CCeeccCccccCc
Confidence 00 1122221111111123567999999998543 3789999 5544432211111
Q ss_pred -EecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCc
Q psy16426 106 -ILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGD 141 (194)
Q Consensus 106 -~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~ 141 (194)
...++.+...+.|.|......|.|.|+|.+.|....
T Consensus 161 ~~~~~gt~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~ 197 (207)
T 1l6x_A 161 VLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALH 197 (207)
T ss_dssp EECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred eECCCCCEEEEEEEEECHHHcCCCCEEEEEEEcCCcC
Confidence 133455566667778777667899999999997654
No 169
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.49 E-value=2.9e-13 Score=99.29 Aligned_cols=79 Identities=11% Similarity=0.255 Sum_probs=53.6
Q ss_pred eCCeEEEEEEeecc-CCC-ccEEEecCcEEeeCC-Cc-eeE-EecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceE
Q psy16426 69 EGDQMTLECHSEAY-PKS-INYWTKENGEIIAQG-SK-YEP-ILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTD 143 (194)
Q Consensus 69 ~g~~~~l~C~~~~~-p~p-~v~W~~~~~~~~~~~-~~-~~~-~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~ 143 (194)
.|+.+.|.|.+.+. |.+ .+.|++ ++..+... .. ... ...++.+...+.|.|..+..+|.|.|+|.+.|......
T Consensus 128 ~g~~v~L~C~~~g~~P~~~~v~W~k-~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~ 206 (216)
T 2xzc_L 128 KSGTASVVCLLNNFYPREAKVQWKV-DNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSP 206 (216)
T ss_dssp HTTEEEEEEEEEEEBSSCCEEEEEE-TTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSC
T ss_pred cCCcEEEEEEEEeEcCCceEEEEEE-CCeecCCCeeEecCcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCCCc
Confidence 47899999999884 444 799999 55554332 11 110 11233455667899999999999999999999876544
Q ss_pred EEEEE
Q psy16426 144 GSIKL 148 (194)
Q Consensus 144 ~~~~l 148 (194)
....+
T Consensus 207 ~~~~i 211 (216)
T 2xzc_L 207 VTKSF 211 (216)
T ss_dssp EEEEE
T ss_pred eEEec
Confidence 33333
No 170
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.49 E-value=6e-13 Score=99.74 Aligned_cols=127 Identities=16% Similarity=0.246 Sum_probs=84.4
Q ss_pred CCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCc-------------------------------eEE------
Q psy16426 9 PPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENG-------------------------------EII------ 51 (194)
Q Consensus 9 ~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~-------------------------------~l~------ 51 (194)
.+.+...+..+.+.+|++|+|.|.+.+.|.+.+.|++.+. .|.
T Consensus 4 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 83 (250)
T 3esu_F 4 DIVLIQSTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQ 83 (250)
T ss_dssp CCCEECSCSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred ceeEEecCCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCCh
Confidence 3556777788889999999999999999999999998520 111
Q ss_pred -------------------------EeeC-------------------CeEEeccceeEEeeCCeEEEEEEeeccC--CC
Q psy16426 52 -------------------------AQVP-------------------PMIWIQNQLVGAMEGDQMTLECHSEAYP--KS 85 (194)
Q Consensus 52 -------------------------v~~~-------------------p~i~~~~~~~~~~~g~~~~l~C~~~~~p--~p 85 (194)
|..+ +.+...+....+.+|+.+.|.|.+.+.+ .+
T Consensus 84 ~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~ 163 (250)
T 3esu_F 84 EDIGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKDSGYAFSSS 163 (250)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEECCSTTGGGS
T ss_pred hhCEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEecCCcccCC
Confidence 1111 1111223345577899999999998876 77
Q ss_pred ccEEEecC-c-EE--e-e-------------CCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEc
Q psy16426 86 INYWTKEN-G-EI--I-A-------------QGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKN 137 (194)
Q Consensus 86 ~v~W~~~~-~-~~--~-~-------------~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n 137 (194)
.+.|+++. + .+ . . ...++...... .....+|.|.++..+|.|.|+|.+.+
T Consensus 164 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 164 WMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADK--SSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp EEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEG--GGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred EEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecC--CCCeEEEEECCCCcccCEEEEEEEec
Confidence 89999842 1 11 0 0 01122211100 01235799999999999999999997
No 171
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.49 E-value=3.3e-13 Score=87.06 Aligned_cols=92 Identities=24% Similarity=0.341 Sum_probs=71.2
Q ss_pred CCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeC--CCceeEEecCCceeEEEEEEEeecCCCCCeEEE
Q psy16426 55 PPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQ--GSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYK 132 (194)
Q Consensus 55 ~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~--~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~ 132 (194)
+|.+...+....+.+|+.+.|.|.+.+.|.|.+.|++ ++..+.. ..++.....+. .++|.|.++..+|.|.|+
T Consensus 5 pP~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~-~~~~~~~~~~~~~~~~~~~~----~~~L~i~~v~~~D~G~Y~ 79 (100)
T 3irg_A 5 PPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSC-GGRKIHSQEQGRFHIENTDD----LTTLIIMDVQKQDGGLYT 79 (100)
T ss_dssp EEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEE-TTEECCTTGGGTEEEEECSS----EEEEEESSCCGGGCEEEE
T ss_pred CCeeecCCCcEEEcCCCcEEEEEEEEEcCCCceEEEE-CCEEeecCCCCEEEEEecCC----EEEEEEeecCcccCEEEE
Confidence 5556556667788999999999999999999999999 5554432 22333222211 468999999999999999
Q ss_pred EEEEcCCCceEEEEEEEcc
Q psy16426 133 CVSKNSLGDTDGSIKLYGK 151 (194)
Q Consensus 133 C~a~n~~g~~~~~~~l~v~ 151 (194)
|.+.|..|.....+.|.|.
T Consensus 80 C~a~n~~g~~~~~~~l~V~ 98 (100)
T 3irg_A 80 LSLGNEFGSDSATVNIHIR 98 (100)
T ss_dssp EEEEETTEEEEEEEEEEEE
T ss_pred EEEEeCCCcEEEEEEEEEE
Confidence 9999999998888888764
No 172
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.48 E-value=4.6e-13 Score=98.42 Aligned_cols=78 Identities=14% Similarity=0.299 Sum_probs=50.5
Q ss_pred eeCCeEEEEEEeec-cCCC-ccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEE
Q psy16426 68 MEGDQMTLECHSEA-YPKS-INYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGS 145 (194)
Q Consensus 68 ~~g~~~~l~C~~~~-~p~p-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~ 145 (194)
.+|+.+.|.|.+.+ .|.| .+.|++++ ...... ........+.+...+.|.|... ..|.|.|+|.|.|..+.....
T Consensus 137 ~~g~~v~L~C~~~g~~P~p~~v~W~~~g-~~~~~~-~~~~~~~~~~~~~~s~L~i~~~-~~d~g~Y~C~a~n~~~~~~~~ 213 (219)
T 1c1e_H 137 QTNSMVTLGCLVKGYFPEPVTVTWNSGS-LSSGVH-TFPAVLQSDLYTLSSSVTVPSS-PRPSETVTCNVAHPASSTKVD 213 (219)
T ss_dssp CCSSEEEEEEEEEEEBSSCCEEEEGGGT-BCTTEE-ECCCEESSSCEEEEEEEEEESS-STTTSCCEEEEEEGGGTEEEE
T ss_pred ccCCeEEEEEEcccccCCCeEEEEEeCC-cccceE-ecCCcccCCeEEEEEEEEEecc-cCCCCEEEEEEEeCCCCccEE
Confidence 46899999999998 7888 89999844 321100 0001112233445568888444 445699999999988776554
Q ss_pred EEE
Q psy16426 146 IKL 148 (194)
Q Consensus 146 ~~l 148 (194)
..+
T Consensus 214 ~~i 216 (219)
T 1c1e_H 214 KKI 216 (219)
T ss_dssp EEC
T ss_pred Eec
Confidence 443
No 173
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.48 E-value=4.9e-13 Score=99.30 Aligned_cols=89 Identities=17% Similarity=0.285 Sum_probs=54.1
Q ss_pred EeeCCeEEEEEEeecc-CCC-ccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEE
Q psy16426 67 AMEGDQMTLECHSEAY-PKS-INYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDG 144 (194)
Q Consensus 67 ~~~g~~~~l~C~~~~~-p~p-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~ 144 (194)
+..|+.+.|.|.+.+. |.+ .+.|++++..+.... .......+.+...+.|.|..+..+| |.|+|.+.|..+....
T Consensus 133 ~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~--~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~ 209 (227)
T 1mju_H 133 DTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHT--FPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKV 209 (227)
T ss_dssp -----CEEEEEEEEEEBSSCCEEEEGGGTBCTTEEE--CCCEEETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGGTEEE
T ss_pred ccCCCcEEEEEEeecEeCCCeEEEEecCCCcCCcEE--CCceecCCeEEEEEEEEEchhhcCC-CeEEEEEEECCCCcce
Confidence 3468899999999986 666 899998443211000 0001112344556789999888878 9999999998777666
Q ss_pred EEEEEcccCCCCCh
Q psy16426 145 SIKLYGKKKKKKKK 158 (194)
Q Consensus 145 ~~~l~v~~~p~~p~ 158 (194)
...+.+...|..|.
T Consensus 210 ~~~~~~~~~p~~~~ 223 (227)
T 1mju_H 210 DKKIEPRGPTIKPC 223 (227)
T ss_dssp EEECCCCCC-----
T ss_pred EEEeCCCCCCCCCC
Confidence 67777777766665
No 174
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.48 E-value=5.3e-13 Score=90.24 Aligned_cols=87 Identities=20% Similarity=0.221 Sum_probs=68.7
Q ss_pred eCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecC---CceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEE
Q psy16426 69 EGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLD---NAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGS 145 (194)
Q Consensus 69 ~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~---~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~ 145 (194)
.+..+.|.|.+.|.|.|.++|++ ++..+....+....... ......++|.|.++...|.|.|+|.|.|.+|...++
T Consensus 14 ~~~~~~l~c~v~G~P~P~I~W~k-nG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~t 92 (126)
T 1he7_A 14 EMHHWCIPFSVDGQPAPSLRWLF-NGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASAS 92 (126)
T ss_dssp CCCEEEEEEEECCSSCCEEEEEE-TTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEEE
T ss_pred cCccEEEEEEEeeeCCCeEEEEE-CCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEEE
Confidence 56789999999999999999999 66666555443322221 111224689999999999999999999999999999
Q ss_pred EEEEcccCCCC
Q psy16426 146 IKLYGKKKKKK 156 (194)
Q Consensus 146 ~~l~v~~~p~~ 156 (194)
+.|.+...|..
T Consensus 93 ~~l~v~~~P~~ 103 (126)
T 1he7_A 93 IMAAFMDNPFE 103 (126)
T ss_dssp EEECCCSCTTS
T ss_pred EEEEEEcCCCC
Confidence 99998887765
No 175
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.47 E-value=4.5e-12 Score=102.66 Aligned_cols=143 Identities=14% Similarity=0.106 Sum_probs=96.4
Q ss_pred ccccCCeEE-EcCCeeeeeCCCcEEEEeeeeccCCc---eeEEEecCceEE-----------------------------
Q psy16426 5 GQNVPPMIW-IQNQLVGAMEGDQMTLECHSEAYPKS---INYWTKENGEII----------------------------- 51 (194)
Q Consensus 5 ~v~~~P~~~-~~~~~~~v~~G~~v~L~C~~~g~p~~---~v~W~k~~~~l~----------------------------- 51 (194)
.|..+|.+. ..+.+..+.+|++++|.|.+.+.+++ .|.|++++..+.
T Consensus 81 ~V~~~P~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 160 (450)
T 1z7z_I 81 TVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVGEPAEVTTTVLVRRDHHGANFSCR 160 (450)
T ss_dssp EEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECCTTTEEEEEEEECCSSCSSCEEEEE
T ss_pred EEEeCCCcceecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEeecccccccccceEEEEEeeccccCceEEEE
Confidence 345566655 56677889999999999999998887 899999876543
Q ss_pred Ee-e-------------CC-eEEe------ccce---eEEeeCCeEEEEEEeecc-C--CCccEEEecCcEEeeCCCcee
Q psy16426 52 AQ-V-------------PP-MIWI------QNQL---VGAMEGDQMTLECHSEAY-P--KSINYWTKENGEIIAQGSKYE 104 (194)
Q Consensus 52 v~-~-------------~p-~i~~------~~~~---~~~~~g~~~~l~C~~~~~-p--~p~v~W~~~~~~~~~~~~~~~ 104 (194)
+. . .+ .+.+ .+.. ..+.+|+.+.|.|.+.+. | .+.+.|++ ++..... ..
T Consensus 161 a~n~~g~~~~~~~~~~s~~~~l~v~~~~~~~p~~~~~~~v~~G~~v~l~C~~~g~~P~~~~~~~W~~-~~~~~~~--~~- 236 (450)
T 1z7z_I 161 TELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLAL-GDQRLNP--TV- 236 (450)
T ss_dssp EEEECGGGTSCEEEEECCCEECEECCCCSSCCEEECCSEEETTSEEEEEEEEESCTTGGGCEEEEEE-TTEECCC--EE-
T ss_pred EEcccCCCCceEEeeccCccceeeeccCCCCCEecCceeEEeCCcEEEEEEeeCCCCCCceEEEEeC-CCEeCCc--eE-
Confidence 00 0 11 1111 0111 456789999999999998 6 67889999 4444332 11
Q ss_pred EEecCCceeEEEEEEEeecCCCCCe--EEEEEEEcCCCceEEEEEEEcccCCC
Q psy16426 105 PILLDNAYKIHMKLTIKAVTKQDFG--AYKCVSKNSLGDTDGSIKLYGKKKKK 155 (194)
Q Consensus 105 ~~~~~~~~~~~~~L~i~~~~~~d~g--~y~C~a~n~~g~~~~~~~l~v~~~p~ 155 (194)
....... ...+.+ ++..+|.| .|+|.+.|..|.......|.|...|.
T Consensus 237 -~~~~~~~--~~~~~~-~v~~~d~G~~~Y~C~a~n~~g~~~~~~~l~V~~~~~ 285 (450)
T 1z7z_I 237 -TYGNDSF--SAKASV-SVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPA 285 (450)
T ss_dssp -EEETTEE--EEEEEE-ECCGGGCEEEEEEEEEEETTEEEEEEEEEEEECCCC
T ss_pred -EecCCce--eEEEEE-EeEhhhCCcEEEEEEEccCCccEEEEEEEEEecCCC
Confidence 1122211 112222 77899999 99999999999887777777766443
No 176
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.47 E-value=6.9e-13 Score=102.63 Aligned_cols=138 Identities=15% Similarity=0.158 Sum_probs=91.2
Q ss_pred EEEcCCeeeeeCCCcEEEEeeeeccCCc-----eeEEEecCce-----------------------------------EE
Q psy16426 12 IWIQNQLVGAMEGDQMTLECHSEAYPKS-----INYWTKENGE-----------------------------------II 51 (194)
Q Consensus 12 ~~~~~~~~~v~~G~~v~L~C~~~g~p~~-----~v~W~k~~~~-----------------------------------l~ 51 (194)
+...|.++.+..|++++|.|.+.+.+.+ .|.|++++.. |.
T Consensus 3 vv~~P~~v~~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~ 82 (313)
T 4fqp_A 3 VVQAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLR 82 (313)
T ss_dssp EEECCSEECCBTTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEE
T ss_pred EEcCCCEEEEecCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEE
Confidence 4566777888999999999999887655 4899997531 11
Q ss_pred -------------------------------EeeCCeEEeccceeEEeeCCeEEEEEEee-ccCCCccEEEecCcEEeeC
Q psy16426 52 -------------------------------AQVPPMIWIQNQLVGAMEGDQMTLECHSE-AYPKSINYWTKENGEIIAQ 99 (194)
Q Consensus 52 -------------------------------v~~~p~i~~~~~~~~~~~g~~~~l~C~~~-~~p~p~v~W~~~~~~~~~~ 99 (194)
+..+|.+........+..+..+.+.|.+. +.|.+.+.|++++..+..
T Consensus 83 I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~- 161 (313)
T 4fqp_A 83 MFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPN- 161 (313)
T ss_dssp ECSCCGGGCEEEEEEEECSSSCEEEEEEEECCBBCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEE-
T ss_pred ECcCChhhCEEEEEEEeeccCcceeeeeeeeeccCCcceecccceEeecCceEEEEEEccCccCCcEEEeecCCccccc-
Confidence 22334443333334445677888889765 678899999995443322
Q ss_pred CCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceE--EEEEEEcc
Q psy16426 100 GSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTD--GSIKLYGK 151 (194)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~--~~~~l~v~ 151 (194)
.... ....++.+...+.|.|......|.|.|+|.+.|..+... .++.|.|.
T Consensus 162 ~~~~-~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~ 214 (313)
T 4fqp_A 162 TSQV-PGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVY 214 (313)
T ss_dssp EEEE-ECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBC
T ss_pred ccee-eeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccc
Confidence 1111 122333344566899999999999999999999876543 34555444
No 177
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.47 E-value=2.7e-13 Score=102.61 Aligned_cols=127 Identities=15% Similarity=0.158 Sum_probs=86.7
Q ss_pred cCCeEEEcCCeeeeeCCCcEEEEeeeec-cCCc--eeEEEecCceEE---------------------------------
Q psy16426 8 VPPMIWIQNQLVGAMEGDQMTLECHSEA-YPKS--INYWTKENGEII--------------------------------- 51 (194)
Q Consensus 8 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g-~p~~--~v~W~k~~~~l~--------------------------------- 51 (194)
.+|.+.. +..+.+|++++|.|.+.+ .|.+ .++|++++..+.
T Consensus 5 ~~p~~~~---~~~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~~~~~~~d~g~g~Y~C~a~ 81 (265)
T 2oz4_A 5 TPPQLVS---PRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTVTYGNDSFSAKASVSVTAEDEGTQRLTCAVI 81 (265)
T ss_dssp SCCEEEC---CSEEETTEEEEEEEEEESCSCGGGCEEEEEETTEECCCEEEECSSEEEEEEEEEECGGGCEEEEEEEEEE
T ss_pred CCCcccc---CceEecCCCEEEEEEccCCCCCcceEEEEEeCCEECCceEeeCCCeEEEEeecccccccCCcceEEEEEe
Confidence 3455543 237889999999999998 7766 999999875432
Q ss_pred -------------Eee--CCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEE
Q psy16426 52 -------------AQV--PPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHM 116 (194)
Q Consensus 52 -------------v~~--~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (194)
|.. +|.+. .....+.+|+.+.|.|.+. |.+.+.| . +..+ .... ..+
T Consensus 82 n~~~~~~~~~~l~V~~~p~p~~~--~~~~~v~~G~~v~l~C~~~--p~~~i~W-~-g~~~-~~~~------------~~~ 142 (265)
T 2oz4_A 82 LGNQSQETLQTVTIYSFPAPNVI--LTKPEVSEGTEVTVKCEAH--PRAKVTL-N-GVPA-QPLG------------PRA 142 (265)
T ss_dssp ETTEEEEEEEEEEEECCCCCEEE--ESCSEEETTCEEEEEEECC--TTSEEEE-S-SCSS-SCCS------------SEE
T ss_pred cCCCCcEEEEEEEEeCCCCceee--cCCceecCCCcEEEEEEcc--CCCEEEE-C-CEEc-cCCC------------CcE
Confidence 222 22222 2234467899999999988 7889999 2 3322 1111 134
Q ss_pred EEEEeecCCCCCeEEEEEEEc-CCCceE---EEEEEEcccCCCC
Q psy16426 117 KLTIKAVTKQDFGAYKCVSKN-SLGDTD---GSIKLYGKKKKKK 156 (194)
Q Consensus 117 ~L~i~~~~~~d~g~y~C~a~n-~~g~~~---~~~~l~v~~~p~~ 156 (194)
.|.|..+..+|.|.|+|.+.| ..|... ..+.|.|...|..
T Consensus 143 ~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~ 186 (265)
T 2oz4_A 143 QLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRL 186 (265)
T ss_dssp CCEEECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEEEEEEEC
T ss_pred EEEEccccccCCceEEEEEEcCCCCCcccccccEEEEEEeCCcc
Confidence 788888889999999999985 446655 5667777655443
No 178
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.47 E-value=2.6e-13 Score=93.63 Aligned_cols=86 Identities=15% Similarity=0.274 Sum_probs=66.2
Q ss_pred cceeEEeeCCeEEEEEEeeccCCCccEEEecCc---------------------------EEe-eCCCceeEEecCCcee
Q psy16426 62 NQLVGAMEGDQMTLECHSEAYPKSINYWTKENG---------------------------EII-AQGSKYEPILLDNAYK 113 (194)
Q Consensus 62 ~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~---------------------------~~~-~~~~~~~~~~~~~~~~ 113 (194)
+..+.+.+|+.+.|.|.+.|.|.|.+.|++++. ..+ ....++.+...+
T Consensus 25 p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~---- 100 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTK---- 100 (139)
T ss_dssp CCEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEET----
T ss_pred CCCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCC----
Confidence 456778899999999999999999999999551 111 122233222111
Q ss_pred EEEEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEcc
Q psy16426 114 IHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGK 151 (194)
Q Consensus 114 ~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~ 151 (194)
..+.|.|.++...|.|.|+|.|.|..|...+.+.|.|.
T Consensus 101 ~~s~L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 101 DRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp TEEEEECSCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred CEEEEEECCCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 14689999999999999999999999999999888875
No 179
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.47 E-value=7.6e-14 Score=108.72 Aligned_cols=136 Identities=12% Similarity=0.177 Sum_probs=86.6
Q ss_pred ccCCeEEEcCCeeeeeCC--CcEEEEeeeecc-C-CceeEEEecCceEE-------------------------------
Q psy16426 7 NVPPMIWIQNQLVGAMEG--DQMTLECHSEAY-P-KSINYWTKENGEII------------------------------- 51 (194)
Q Consensus 7 ~~~P~~~~~~~~~~v~~G--~~v~L~C~~~g~-p-~~~v~W~k~~~~l~------------------------------- 51 (194)
..+|.+.+.+.......| ++++|.|.+.+. | .+.|+|++++..+.
T Consensus 5 ~~~P~v~~~~~~~~~~~~~~~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~ 84 (323)
T 2wqr_A 5 FTPPTVKILQSSCDGGGHFPPTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSD 84 (323)
T ss_dssp CCCCCCEEEEECCCTTSCCCSEEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTT
T ss_pred CCCCEEEEeCCChHHhccCCCcEEEEEEEeCeECCCeEEEEEECCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCCC
Confidence 457777766644433445 599999999886 4 47999999864421
Q ss_pred ------Eee------------------CCeE-EeccceeEEeeCCeEEEEEEeeccC-CC---ccEEEecCcEEeeCCCc
Q psy16426 52 ------AQV------------------PPMI-WIQNQLVGAMEGDQMTLECHSEAYP-KS---INYWTKENGEIIAQGSK 102 (194)
Q Consensus 52 ------v~~------------------~p~i-~~~~~~~~~~~g~~~~l~C~~~~~p-~p---~v~W~~~~~~~~~~~~~ 102 (194)
+.. .|.+ ...+....+.+|+.+.|.|.+.+.+ .+ .+.|+++++........
T Consensus 85 g~Y~C~a~n~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~ 164 (323)
T 2wqr_A 85 RTYTCQVTYQGHTFEDSTKKCADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTR 164 (323)
T ss_dssp CCEEEEEEETTEEEEEEECCCCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCC
T ss_pred CcEEEEEEeCCCCcceeeecCCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccC
Confidence 000 1111 1112222245699999999998864 45 79999955444332211
Q ss_pred eeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCce
Q psy16426 103 YEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDT 142 (194)
Q Consensus 103 ~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~ 142 (194)
......++.+...+.|.|.++..+|.|.|+|.+.|..+..
T Consensus 165 ~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~~ 204 (323)
T 2wqr_A 165 KEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPR 204 (323)
T ss_dssp EEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSS
T ss_pred CCccCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCCCC
Confidence 1111223334456789999999999999999999987544
No 180
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=3.3e-13 Score=87.82 Aligned_cols=92 Identities=17% Similarity=0.174 Sum_probs=70.0
Q ss_pred CCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEE
Q psy16426 55 PPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCV 134 (194)
Q Consensus 55 ~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~ 134 (194)
+|.|........+.+|+.+.|.|.+ .|.|.+.|++ ++..+....++.+.. ++. ...|.|.++..+|.|.|+|.
T Consensus 7 p~~~~~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k-~g~~l~~~~r~~i~~-~~~---~~~L~I~~v~~~D~G~Y~C~ 79 (100)
T 2yuz_A 7 GLKILTPLTDQTVNLGKEICLKCEI--SENIPGKWTK-NGLPVQESDRLKVVQ-KGR---IHKLVIANALTEDEGDYVFA 79 (100)
T ss_dssp CCCCSBCCCCEEEETTSCCCEEEEC--SSCCCEEEEE-TTEECCCCSSEEEEE-CSS---EEEEEESSCCGGGCSEEEEE
T ss_pred CCEEeccCCceEEcCCCCEEEEEEe--CCCCeEEEEE-CCEECCCCCcEEEEE-eCC---EEEEEECCCChhhCEEEEEE
Confidence 4555556667788999999999999 7889999999 666666555655332 222 45899999999999999999
Q ss_pred EEcCCCceEEEEEEEcccCCC
Q psy16426 135 SKNSLGDTDGSIKLYGKKKKK 155 (194)
Q Consensus 135 a~n~~g~~~~~~~l~v~~~p~ 155 (194)
|.|. ....+..|.|..+|.
T Consensus 80 a~N~--~~~~~a~L~V~~~P~ 98 (100)
T 2yuz_A 80 PDAY--NVTLPAKVHVISGPS 98 (100)
T ss_dssp ESSS--CCCEEEEEEEECCSC
T ss_pred EcCC--CeeEEEEEEEeCCCC
Confidence 9998 445566777776664
No 181
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.46 E-value=1e-12 Score=97.82 Aligned_cols=126 Identities=13% Similarity=0.198 Sum_probs=84.1
Q ss_pred CeEEEcCCeeeeeCCCcEEEEeeeeccC----CceeEEEecC--c-----------------------------eEE---
Q psy16426 10 PMIWIQNQLVGAMEGDQMTLECHSEAYP----KSINYWTKEN--G-----------------------------EII--- 51 (194)
Q Consensus 10 P~~~~~~~~~~v~~G~~v~L~C~~~g~p----~~~v~W~k~~--~-----------------------------~l~--- 51 (194)
..+...+.++.+.+|++|+|.|.+.+.+ .+.+.||+++ . .|.
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 81 (240)
T 1moe_A 2 IVLTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDP 81 (240)
T ss_dssp CCEEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESS
T ss_pred CceEeeCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcC
Confidence 3567778888999999999999999987 7899999952 1 121
Q ss_pred ----------------------------EeeC------CeEEeccceeEEeeCCeEEEEEEeeccC--CCccEEEecC-c
Q psy16426 52 ----------------------------AQVP------PMIWIQNQLVGAMEGDQMTLECHSEAYP--KSINYWTKEN-G 94 (194)
Q Consensus 52 ----------------------------v~~~------p~i~~~~~~~~~~~g~~~~l~C~~~~~p--~p~v~W~~~~-~ 94 (194)
|..+ +.+...+....+.+|+.+.|.|.+.+.| .+.+.|++++ +
T Consensus 82 v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g 161 (240)
T 1moe_A 82 VEADDVATYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPE 161 (240)
T ss_dssp CCGGGCEEEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTT
T ss_pred CChhhCEEEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEECCC
Confidence 2211 1122233445577899999999999877 3589999842 1
Q ss_pred EEe------e-----------CCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEc
Q psy16426 95 EII------A-----------QGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKN 137 (194)
Q Consensus 95 ~~~------~-----------~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n 137 (194)
... . ...++...... .....+|.|.++..+|.|.|+|.+.+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~a~~ 219 (240)
T 1moe_A 162 QGLEWIGRIDPANGNSKYVPKFQGKATITADT--SSNTAYLQLTSLTSEDTAVYYCAPFG 219 (240)
T ss_dssp SCCEEEEEEETTTTEEEECGGGTTTEEEEEET--TTTEEEEEECSCCGGGCEEEEEEECS
T ss_pred CCcEEEEEEcccCCccccCccccccEEEEEcc--cCCEEEEEECcCCHHHCEEEEEEEEe
Confidence 110 0 01122211100 01135899999999999999999984
No 182
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.46 E-value=3e-13 Score=106.82 Aligned_cols=123 Identities=18% Similarity=0.218 Sum_probs=89.2
Q ss_pred eeeeeCCCcEEEEeeeeccCCceeEEEecCce----------------------------------EE------------
Q psy16426 18 LVGAMEGDQMTLECHSEAYPKSINYWTKENGE----------------------------------II------------ 51 (194)
Q Consensus 18 ~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~----------------------------------l~------------ 51 (194)
.+.+.+|++++|.|.+.+.|.+.+.|++++.. |.
T Consensus 3 ~v~~~~G~~v~L~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 82 (363)
T 1wio_A 3 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 82 (363)
T ss_dssp EEEEETTSCEEECCCCTTCSSCCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSCCGGGCEEE
T ss_pred eEEEeCCCeEEEEEEecCCCceEEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCCCHHHCEEE
Confidence 46788999999999999999999999998632 11
Q ss_pred -EeeCC----------eEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEE
Q psy16426 52 -AQVPP----------MIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTI 120 (194)
Q Consensus 52 -v~~~p----------~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i 120 (194)
..... .+...+ ...+.+|+.+.|.|.+.+.|.|.+.|+++++.... ....|.|
T Consensus 83 ~C~~~n~~~~~~l~V~~~~~~~-~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~---------------~~~~L~i 146 (363)
T 1wio_A 83 ICEVEDQKEEVQLLVFGLTANS-DTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQ---------------GGKTLSV 146 (363)
T ss_dssp EEEETTEEEEEEEEEEEEEESS-CSSEESBSCEEEEEECCTTCCCCEEEECSSSCEEE---------------ESSEEEE
T ss_pred EEEEEECCCcEEEEEEeCCCCC-ceEEecCCCEEEEEEcCCCCCCeEEEEcCCCcccc---------------cceEEEE
Confidence 00000 011122 23467899999999999999999999985433211 1238999
Q ss_pred eecCCCCCeEEEEEEEcCCCceEEEEEEEcccCCCC
Q psy16426 121 KAVTKQDFGAYKCVSKNSLGDTDGSIKLYGKKKKKK 156 (194)
Q Consensus 121 ~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~p~~ 156 (194)
.++..+|.|.|+|.+.|..+.....+.|.|...|..
T Consensus 147 ~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~~p~~ 182 (363)
T 1wio_A 147 SQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKA 182 (363)
T ss_dssp CSBCGGGCEECEEEEEETTEEEEECCEECEECCSCS
T ss_pred eeCChhcCCEEEEEEecCCCeEEEEEEEEEecCCCC
Confidence 999999999999999998766666667766655443
No 183
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.46 E-value=7.2e-13 Score=96.80 Aligned_cols=73 Identities=16% Similarity=0.184 Sum_probs=50.0
Q ss_pred EeeCCeEEEEEEeecc----CCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCc-
Q psy16426 67 AMEGDQMTLECHSEAY----PKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGD- 141 (194)
Q Consensus 67 ~~~g~~~~l~C~~~~~----p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~- 141 (194)
+.+|+.+.|.|.+.+. |.|.+.|++++... ... . ....+.|.|..+..+|.|.|+|.|.|..+.
T Consensus 135 ~~~G~~v~L~C~~~~~~~~~p~p~v~W~~~~~~~-~~~-~---------~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~ 203 (214)
T 2zg1_A 135 LESGRPTRLSCSLPGSCEAGPPLTFSWTGNALSP-LDP-E---------TTRSSELTLTPRPEDHGTNLTCQMKRQGAQV 203 (214)
T ss_dssp CCTTCCEEEEEECTTCCSCSSCCEEEEESSTTSS-SCS-S---------CCCSSEEEECCCTTCCSCEEEEEEECC----
T ss_pred ccCCCeEEEEEEeccCCCCCCCceEEEeCCCCcc-CCC-C---------ceeEEEEEEecccHHcCcEEEEEEEeCCCCc
Confidence 3568999999999774 78899999844321 111 1 111348999999999999999999997644
Q ss_pred -eEEEEEEEc
Q psy16426 142 -TDGSIKLYG 150 (194)
Q Consensus 142 -~~~~~~l~v 150 (194)
....+.|.|
T Consensus 204 ~~~~~v~l~V 213 (214)
T 2zg1_A 204 TTERTVQLNV 213 (214)
T ss_dssp CCEEEEECCC
T ss_pred ceEEEEEEEe
Confidence 445555544
No 184
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.46 E-value=1.8e-14 Score=112.66 Aligned_cols=132 Identities=21% Similarity=0.313 Sum_probs=92.3
Q ss_pred eeeeeCCCcEEEEee-----eeccCCceeEEEecCceEE-----------------------------------------
Q psy16426 18 LVGAMEGDQMTLECH-----SEAYPKSINYWTKENGEII----------------------------------------- 51 (194)
Q Consensus 18 ~~~v~~G~~v~L~C~-----~~g~p~~~v~W~k~~~~l~----------------------------------------- 51 (194)
+..+.+|++++|.|. +.+.|.+.+.|++++..+.
T Consensus 129 ~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~ 208 (339)
T 3o4o_C 129 PQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQY 208 (339)
T ss_dssp EEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSSEEECTTSSEEEESSCCGGGCEEEEEEEECCBTTBCC
T ss_pred ceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCceeEEcCCcceEEEcccCHhhCeEEEEEEEECCCCeEE
Confidence 346789999999999 7888999999999764331
Q ss_pred ---------Ee-----eCCeEEeccceeEEeeCCeEEEEEEe---eccC-CCccEEEecCcEEee---------CCCcee
Q psy16426 52 ---------AQ-----VPPMIWIQNQLVGAMEGDQMTLECHS---EAYP-KSINYWTKENGEIIA---------QGSKYE 104 (194)
Q Consensus 52 ---------v~-----~~p~i~~~~~~~~~~~g~~~~l~C~~---~~~p-~p~v~W~~~~~~~~~---------~~~~~~ 104 (194)
|. .+|.+...+....+..|+.+.|.|.+ .+.| .+.+.|+. ++..+. ....+.
T Consensus 209 ~~~~~~~l~V~~~~~~~~P~i~~~~~~~~v~~G~~v~L~C~~~~~~g~P~~~~v~W~~-~g~~~~~~~~~~~~~~~~~~~ 287 (339)
T 3o4o_C 209 NITRSIELRIKKKKEETIPVIISPLKTISASLGSRLTIPCKVFLGTGTPLTTMLWWTA-NDTHIESAYPGGRVTEGPRQE 287 (339)
T ss_dssp EEEEEEEEEEECCCCCCCCEECCCSCCCCCCCCSCCCCCCCEEESSSCCSSCEEEEES-SSSCSSSSSCSSSCEECCCEE
T ss_pred EEEEEEEEEEEcCCCCCCCEEecCCceeEeccCCCEEEEEEEECCCCCCCCceEEEEE-CCeecccccccccceecceEE
Confidence 11 13344433344556789999999999 8888 78888998 443321 111111
Q ss_pred EEecCCceeEEEEEEEeecCCCCC-eEEEEEEEcCCCceEEEEEEEcc
Q psy16426 105 PILLDNAYKIHMKLTIKAVTKQDF-GAYKCVSKNSLGDTDGSIKLYGK 151 (194)
Q Consensus 105 ~~~~~~~~~~~~~L~i~~~~~~d~-g~y~C~a~n~~g~~~~~~~l~v~ 151 (194)
...++.....+.|.|.++..+|. |.|+|.|.|..|...+.+.+.+.
T Consensus 288 -~~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~~~~~ 334 (339)
T 3o4o_C 288 -YSENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLSFQTLRTTVKEH 334 (339)
T ss_dssp -CCCSSSCEEEECCEECSSCCCSCCCCCEEEEEETTEEECCBCCCCC-
T ss_pred -ecccCceEEEEEEEEEEechhhcCccEEEEEEeccCceEEEEEhhHh
Confidence 11222223345899999999997 99999999999998877766554
No 185
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.46 E-value=5.2e-13 Score=99.85 Aligned_cols=133 Identities=17% Similarity=0.317 Sum_probs=87.4
Q ss_pred CeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEe----------------cCc---------------------eEE-
Q psy16426 10 PMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTK----------------ENG---------------------EII- 51 (194)
Q Consensus 10 P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k----------------~~~---------------------~l~- 51 (194)
+.++..+..+.+.+|++++|.|.+.+.+.+.+.||+ ++. .|.
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I 81 (246)
T 4dzb_B 2 AVVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTV 81 (246)
T ss_dssp CCEEEECSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEE
T ss_pred CccEECCcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEE
Confidence 356778888999999999999999999999999999 211 111
Q ss_pred --------------Ee-------------------------eCCeEEec-cceeEEeeCCeEEEEEEeeccCCC--ccEE
Q psy16426 52 --------------AQ-------------------------VPPMIWIQ-NQLVGAMEGDQMTLECHSEAYPKS--INYW 89 (194)
Q Consensus 52 --------------v~-------------------------~~p~i~~~-~~~~~~~~g~~~~l~C~~~~~p~p--~v~W 89 (194)
+. .+|.+... +....+..|+.+.|.|.+.+.+++ .+.|
T Consensus 82 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W 161 (246)
T 4dzb_B 82 TSAHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSW 161 (246)
T ss_dssp CSCCGGGCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEE
T ss_pred CCCCHHHCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccCcCCceEEEE
Confidence 11 01111110 111112248899999999987655 7889
Q ss_pred EecCcEEeeCCCceeEEe-------cCCceeEEEEEEEeecCCCC-CeEEEEEEEcCCCceE
Q psy16426 90 TKENGEIIAQGSKYEPIL-------LDNAYKIHMKLTIKAVTKQD-FGAYKCVSKNSLGDTD 143 (194)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~L~i~~~~~~d-~g~y~C~a~n~~g~~~ 143 (194)
++ ++..+.......... .++.+...+.|.|.....+| .|.|+|.+.|......
T Consensus 162 ~k-~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~~~~~ 222 (246)
T 4dzb_B 162 WV-NGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 222 (246)
T ss_dssp EE-TTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCTT
T ss_pred EE-CCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEecCCCCc
Confidence 99 565554332111000 24445556779999888777 9999999998765543
No 186
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.45 E-value=1.9e-13 Score=102.61 Aligned_cols=134 Identities=16% Similarity=0.215 Sum_probs=82.0
Q ss_pred cCCeEEEcC-Ceee-eeCCCcEEEEeeeecc---CCc-eeEEEecCceEE------------------------------
Q psy16426 8 VPPMIWIQN-QLVG-AMEGDQMTLECHSEAY---PKS-INYWTKENGEII------------------------------ 51 (194)
Q Consensus 8 ~~P~~~~~~-~~~~-v~~G~~v~L~C~~~g~---p~~-~v~W~k~~~~l~------------------------------ 51 (194)
.+|.+.+.+ .... +.+|++++|.|.+.+. |.+ .|.||++++.+.
T Consensus 14 ~~P~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D 93 (239)
T 1i1c_A 14 EVSSVFIFPPKTKDVLGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLN 93 (239)
T ss_dssp ---CEEEECCCHHHHTTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHT
T ss_pred cCCEEEEECCChHHhcccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccC
Confidence 345544444 4333 7899999999999887 665 899999875431
Q ss_pred -------Ee-------------------eCCeEEeccceeEEeeCCeEEEEEEeeccCCC--ccEEEecCcEEeeCCCce
Q psy16426 52 -------AQ-------------------VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKS--INYWTKENGEIIAQGSKY 103 (194)
Q Consensus 52 -------v~-------------------~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p--~v~W~~~~~~~~~~~~~~ 103 (194)
+. .+|.+.+.........|..+.|.|.+.|.+++ .+.|++ ++..+......
T Consensus 94 ~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k-~g~~l~~~~~~ 172 (239)
T 1i1c_A 94 GKTFKCKVNSGAFPAPIEKSISKPEGTPRGPQVYTMAPPKEEMTQSQVSITCMVKGFYPPDIYTEWKM-NGQPQENYKNT 172 (239)
T ss_dssp TCCEEEEEECSSSSSCEEEEECCCSSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEE-TTEECSSEEEC
T ss_pred CCeEEEEEecccCCCCcEEEEecCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeeeECCCeEEEEEE-CCEECCCceec
Confidence 10 12332222211111246789999999985433 688999 55544322111
Q ss_pred eE-EecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCce
Q psy16426 104 EP-ILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDT 142 (194)
Q Consensus 104 ~~-~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~ 142 (194)
.. ...++.|...+.|.|......|.|.|+|.+.|.....
T Consensus 173 ~~~~~~dgt~~~~s~l~v~~~~~~~~g~YtC~v~n~~l~~ 212 (239)
T 1i1c_A 173 PPTMDTDGSYFLYSKLNVKKETWQQGNTFTCSVLHEGLEN 212 (239)
T ss_dssp CCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSGG
T ss_pred CceECCCCCEEEEEEEEEChhhcCCCCEEEEEEECCCCCC
Confidence 11 2344456666677777766667899999999987543
No 187
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.45 E-value=1.1e-12 Score=105.83 Aligned_cols=131 Identities=15% Similarity=0.293 Sum_probs=85.4
Q ss_pred cCCeEEEcCCeeeeeCCCcEEEEeeeec-cCCc-eeEEEecCceE------------------------E----------
Q psy16426 8 VPPMIWIQNQLVGAMEGDQMTLECHSEA-YPKS-INYWTKENGEI------------------------I---------- 51 (194)
Q Consensus 8 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g-~p~~-~v~W~k~~~~l------------------------~---------- 51 (194)
.+|.+...+....+.+|++++|.|.+.+ .|.+ .|.|++++..+ .
T Consensus 115 ~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 194 (438)
T 1qgc_4 115 AAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHN 194 (438)
T ss_dssp BCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCC
T ss_pred CCCEEEecCCChhhccCCceEEEEEEccccCCCcEEEEEECCEEcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCC
Confidence 4788777555444557889999999987 6666 89999976332 1
Q ss_pred ------------------Eee--CCeEEeccceeEEeeCCeEEEEEEeeccC--CCccEEEecC-cEEee----------
Q psy16426 52 ------------------AQV--PPMIWIQNQLVGAMEGDQMTLECHSEAYP--KSINYWTKEN-GEIIA---------- 98 (194)
Q Consensus 52 ------------------v~~--~p~i~~~~~~~~~~~g~~~~l~C~~~~~p--~p~v~W~~~~-~~~~~---------- 98 (194)
+.. ++.....+....+.+|+.+.|.|.+.+.| .+.+.|++++ +....
T Consensus 195 ~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~ 274 (438)
T 1qgc_4 195 SYTCEATHKTSTSPIVKSFNRNECEVMLVESGGGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGT 274 (438)
T ss_dssp EEEEEEEETTCSSCEEEEEETTC-CCEEEEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSC
T ss_pred eEEEEEEecccCCceecccccccceeEEecCCceEEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCC
Confidence 000 11112223445578899999999999988 6789999842 21111
Q ss_pred -------CCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCC
Q psy16426 99 -------QGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLG 140 (194)
Q Consensus 99 -------~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g 140 (194)
...++....... ....+|.|.+++.+|.|.|+|.|.|..+
T Consensus 275 ~~~~~~~~~~r~~~~~~~~--~~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 321 (438)
T 1qgc_4 275 YTYYPDSVKGRFTISRDNA--KNTLYLQMSSLRSADTAMYYCVRREDGG 321 (438)
T ss_dssp CEECCGGGTTTEEEEEETT--TTEEEEEECSCCGGGCCEEEEEECCSSS
T ss_pred ceecCcccCCcEEEEeecC--CCeEEEEECCCChhhCEEEEEEEEccCC
Confidence 012222111110 1145899999999999999999998443
No 188
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.45 E-value=9.2e-13 Score=86.68 Aligned_cols=97 Identities=12% Similarity=0.094 Sum_probs=69.1
Q ss_pred CCeEEeccceeEEeeCCeEEEEEEeeccCC---CccEEEecCcEEeeC--CCceeEE--ecCCceeEEEEEEEeecCCCC
Q psy16426 55 PPMIWIQNQLVGAMEGDQMTLECHSEAYPK---SINYWTKENGEIIAQ--GSKYEPI--LLDNAYKIHMKLTIKAVTKQD 127 (194)
Q Consensus 55 ~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~---p~v~W~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~L~i~~~~~~d 127 (194)
.|.+...+..+.+.+|+++.|.|.+.+.|. |.+.|++++...... ..++... .........++|.|.+++.+|
T Consensus 4 ~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 83 (108)
T 3cx2_A 4 IGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAF 83 (108)
T ss_dssp CCSCSBCCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGGG
T ss_pred ccEEEeCCCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCcc
Confidence 345555667778899999999999999887 899999944222111 1122211 111111235689999999999
Q ss_pred CeEEEEEEEcCCCceEEEEEEEcc
Q psy16426 128 FGAYKCVSKNSLGDTDGSIKLYGK 151 (194)
Q Consensus 128 ~g~y~C~a~n~~g~~~~~~~l~v~ 151 (194)
.|.|+|.+.|..|...+.+.|.|.
T Consensus 84 ~G~Y~C~a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 84 TGSYRCEVSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEEE
T ss_pred CEEEEEEEecCCCceEEEEEEEEe
Confidence 999999999999999999888874
No 189
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.45 E-value=3.3e-12 Score=92.50 Aligned_cols=77 Identities=12% Similarity=0.217 Sum_probs=50.7
Q ss_pred eeCCeEEEEEEee-ccCCCccEEEecCcEEeeCCCceeEEecC-CceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEE
Q psy16426 68 MEGDQMTLECHSE-AYPKSINYWTKENGEIIAQGSKYEPILLD-NAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGS 145 (194)
Q Consensus 68 ~~g~~~~l~C~~~-~~p~p~v~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~ 145 (194)
..|+.+.|.|.+. +.|.|.+.|++ ++..+...........+ ..+... .+..+..+|.|.|+|.|.|..|...+.
T Consensus 119 ~~g~~~~l~C~~~~g~P~p~i~W~k-~g~~l~~~~~~~~~~~~~~~~~~~---~~~~v~~~d~g~Y~C~a~n~~~~~s~~ 194 (201)
T 1dr9_A 119 PTSNIRRIICSTSGGFPEPHLSWLE-NGEELNAINTTVSQDPETELYAVS---SKLDFNMTTNHSFMCLIKYGHLRVNQT 194 (201)
T ss_dssp SSTTEEEEEEEEEEESSCEEEEEEE-SSCEECCSEEEEEECTTTCCEEEE---EEEEEETTSCEEEEEEEEETTCCEEEE
T ss_pred CCCCeEEEEEecCCccCCCEEEEEE-CCEECccccceEEecCCCcEEEEE---EEEEEEecCCCEEEEEEecCcceeeeE
Confidence 3477899999994 89999999999 45544432211111112 212222 234445689999999999999988877
Q ss_pred EEE
Q psy16426 146 IKL 148 (194)
Q Consensus 146 ~~l 148 (194)
+.+
T Consensus 195 ~~~ 197 (201)
T 1dr9_A 195 FNW 197 (201)
T ss_dssp EEE
T ss_pred Eec
Confidence 665
No 190
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.45 E-value=3.2e-13 Score=96.58 Aligned_cols=66 Identities=14% Similarity=0.052 Sum_probs=49.8
Q ss_pred eCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEEEEE
Q psy16426 69 EGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKL 148 (194)
Q Consensus 69 ~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l 148 (194)
.+..+.|.|.+.+.|.|.+.|++ ++..+.... .+.|..+..+|.|.|+|.|.|..|...+...|
T Consensus 109 ~~~~v~L~C~~~g~p~p~i~W~~-~g~~l~~~~---------------~~~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l 172 (176)
T 1hng_A 109 ECSNATLTCEVLEGTDVELKLYQ-GKEHLRSLR---------------QKTMSYQWTNLRAPFKCKAVNRVSQESEMEVV 172 (176)
T ss_dssp ETTTTEEEEECSSCSSCEEEEEE-TTEEEEEES---------------SSEEEEECSCCSSCEEEEEEETTEEEEEEECC
T ss_pred cCCcEEEEEEecCCCCcEEEEEE-CCEECCCCC---------------cEEEEEEEccCCeEEEEEEEecCCCceecccc
Confidence 34568999999999999999999 554443221 12344677899999999999999988877665
Q ss_pred Ec
Q psy16426 149 YG 150 (194)
Q Consensus 149 ~v 150 (194)
.+
T Consensus 173 ~~ 174 (176)
T 1hng_A 173 NC 174 (176)
T ss_dssp CC
T ss_pred cC
Confidence 44
No 191
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.45 E-value=1.3e-12 Score=85.31 Aligned_cols=96 Identities=15% Similarity=0.192 Sum_probs=69.2
Q ss_pred CCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCC-------CceeEEecCCceeEEEEEEEeecCCCC
Q psy16426 55 PPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQG-------SKYEPILLDNAYKIHMKLTIKAVTKQD 127 (194)
Q Consensus 55 ~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~L~i~~~~~~d 127 (194)
+|.+...+..+.+.+|+++.|.|.+.+.+.+.+.|++++....... .++....... ...+|.|.+++.+|
T Consensus 6 ~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~~L~I~~v~~~D 82 (108)
T 3m45_A 6 SQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASW---HELSISVSDVSLSD 82 (108)
T ss_dssp --CCCEECCCEEEETTSCEEEEEEESSCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEESS---SEEEEEECSCCGGG
T ss_pred CCCccccCCeeEEEeCCcEEEEeEEcCCCccEEEEEcCCCceEEEcCCcccccCcEEEeecCC---CcEEEEECCCChhH
Confidence 4444445667788999999999999999889999998543222211 1222111111 25689999999999
Q ss_pred CeEEEEEEEcCCCceEEEEEEEcccCC
Q psy16426 128 FGAYKCVSKNSLGDTDGSIKLYGKKKK 154 (194)
Q Consensus 128 ~g~y~C~a~n~~g~~~~~~~l~v~~~p 154 (194)
.|.|+|.+.| .+.....+.|.|..+|
T Consensus 83 ~G~Y~C~~~n-~~~~~~~~~L~V~~~P 108 (108)
T 3m45_A 83 EGQYTCSLFT-MPVKTSKAYLTVLGVP 108 (108)
T ss_dssp CEEEEEEECS-SSCEEEEEEEEEECCC
T ss_pred CeEEEEEEEc-CCCcEEEEEEEEEcCC
Confidence 9999999999 8888888888887654
No 192
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.45 E-value=1.7e-12 Score=99.87 Aligned_cols=128 Identities=17% Similarity=0.237 Sum_probs=88.7
Q ss_pred eeeeeCCCcEEEEeeee-ccCCceeEEEecCceEE--------------------------------E------------
Q psy16426 18 LVGAMEGDQMTLECHSE-AYPKSINYWTKENGEII--------------------------------A------------ 52 (194)
Q Consensus 18 ~~~v~~G~~v~L~C~~~-g~p~~~v~W~k~~~~l~--------------------------------v------------ 52 (194)
.+.+.+|+++.|.|... +.|.+.+.|++++..+. +
T Consensus 10 ~~~v~eg~~v~l~~~~~~~~p~~~v~W~k~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~s~~l 89 (312)
T 2y23_A 10 VVNVDDDGVISLNFECDKMTPKSEFSWSKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIASSYLI 89 (312)
T ss_dssp EEEECTTCCEEEEEECSSCCTTCCEEEEETTEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCEEEEE
T ss_pred eEEEecCCeEEEEEEEeCCCCCcEEEEEECCEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEEEEEE
Confidence 46788999999988865 57889999999875432 0
Q ss_pred --ee------------CCeEEecc-ceeEEeeCCeEEEEEEee-ccCCCccEEEecCcEEeeCCCceeEEecCCceeEEE
Q psy16426 53 --QV------------PPMIWIQN-QLVGAMEGDQMTLECHSE-AYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHM 116 (194)
Q Consensus 53 --~~------------~p~i~~~~-~~~~~~~g~~~~l~C~~~-~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (194)
.. +|.+.... ....+.+|+.+.|.|.+. +.|.+.+.|++ ++..+....++....... ....
T Consensus 90 ~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~-~~~~i~~~~~~~~~~~~~--~~~~ 166 (312)
T 2y23_A 90 DEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIF-NEKEIFEGPKYKMHIDRN--TGII 166 (312)
T ss_dssp CHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEE-TTEEECSSSSCEEEEETT--TTEE
T ss_pred EEeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEE-CCEECeeCCcEEEEEccC--CCEE
Confidence 00 33332222 256678899999999998 88899999999 555555544443222111 1135
Q ss_pred EEEEeecCCCCCeEEEEEEEcCCCceEEEEEE
Q psy16426 117 KLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKL 148 (194)
Q Consensus 117 ~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l 148 (194)
+|.|.++..+|.|.|+|.+.|..+.....+.+
T Consensus 167 ~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~ 198 (312)
T 2y23_A 167 EMFMEKLQDEDEGTYTFQLQDGKATNHSTVVL 198 (312)
T ss_dssp EEEESCCCGGGCEEEEEEEESSSCEEEEEEEE
T ss_pred EEEEccCCcccCEeEEEEEEeCCceEEEEEEE
Confidence 79999999999999999998765555444444
No 193
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.44 E-value=6.2e-13 Score=97.18 Aligned_cols=76 Identities=17% Similarity=0.264 Sum_probs=51.8
Q ss_pred EeeCCeEEEEEEeecc-CCC-ccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEE
Q psy16426 67 AMEGDQMTLECHSEAY-PKS-INYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDG 144 (194)
Q Consensus 67 ~~~g~~~~l~C~~~~~-p~p-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~ 144 (194)
+..|+.+.|.|.+.+. |.| .+.|++++..+.... ... ...++.+...+.|.|..+..+| |.|+|.|.|..|....
T Consensus 130 ~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~-~~~-~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~ 206 (210)
T 3d9a_H 130 AQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHT-FPA-VLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKV 206 (210)
T ss_dssp CCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEE-CCC-EEETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEEE
T ss_pred cccCCcEEEEEEEeeEecCCcEEEEeeCCcccceEE-cCC-ccCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccc
Confidence 3578999999999987 777 899998443211000 000 1122334456689999988777 9999999999887654
Q ss_pred E
Q psy16426 145 S 145 (194)
Q Consensus 145 ~ 145 (194)
.
T Consensus 207 ~ 207 (210)
T 3d9a_H 207 D 207 (210)
T ss_dssp E
T ss_pred c
Confidence 3
No 194
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.44 E-value=2.4e-13 Score=105.83 Aligned_cols=132 Identities=11% Similarity=0.184 Sum_probs=85.2
Q ss_pred CCeE-EEcCCeeeeeCCCcEEEEeeeecc-CCc---eeEEEecCce----------------------EE----------
Q psy16426 9 PPMI-WIQNQLVGAMEGDQMTLECHSEAY-PKS---INYWTKENGE----------------------II---------- 51 (194)
Q Consensus 9 ~P~~-~~~~~~~~v~~G~~v~L~C~~~g~-p~~---~v~W~k~~~~----------------------l~---------- 51 (194)
+|.+ ...+....+.+|++++|.|.+.|. |.+ .|.|+++++. |.
T Consensus 112 ~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~G 191 (323)
T 2wqr_A 112 GVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGE 191 (323)
T ss_dssp GCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTC
T ss_pred CCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCccCCCCCEEEEEEEEECHHHccCCC
Confidence 3444 444555668899999999999885 455 8999996421 11
Q ss_pred ------------------Ee------eCCeEEeccceeEEeeCCeEEEEEEeeccCCC--ccEEEecCcEEeeCCCce--
Q psy16426 52 ------------------AQ------VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKS--INYWTKENGEIIAQGSKY-- 103 (194)
Q Consensus 52 ------------------v~------~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p--~v~W~~~~~~~~~~~~~~-- 103 (194)
+. .+|.+...........|+.+.|.|.+.+.+++ .+.|++ ++..+......
T Consensus 192 ~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k-~g~~l~~~~~~~~ 270 (323)
T 2wqr_A 192 TYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLIQNFMPEDISVQWLH-NEVQLPDARHSTT 270 (323)
T ss_dssp CEEEEEECTTSSSCEEEEECCCCSCCBCCEEEEEECCCCTTCTTEEEEEEEEEEEBSSCCEEEEEE-TTEECCGGGEEEC
T ss_pred CEEEEEECCCCCCCeeeEEEccCCCCCCCEEEEeCCChHHhcCCcEEEEEEeeeeeCCCcEEEEEE-CCEECCCCceeec
Confidence 10 23333222111111238999999999885433 688999 55544332110
Q ss_pred -eEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCc
Q psy16426 104 -EPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGD 141 (194)
Q Consensus 104 -~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~ 141 (194)
.....++.+...+.|.|..+..+|.|.|+|.|.|..+.
T Consensus 271 ~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 271 QPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp CCEECSSSSEEEEEEEEEEHHHHHHCCCEEEEEECTTST
T ss_pred CcccCCCCcEEEEEEEEEChHHccCCCEEEEEEEeCCCC
Confidence 01123444566778999999999999999999998876
No 195
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.44 E-value=3.3e-13 Score=104.61 Aligned_cols=137 Identities=15% Similarity=0.201 Sum_probs=80.1
Q ss_pred cCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceEE------------------------------------
Q psy16426 8 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEII------------------------------------ 51 (194)
Q Consensus 8 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~------------------------------------ 51 (194)
.+|.+...+... +.+|++++|.|.+.+ +.+.+.|++++..+.
T Consensus 118 ~~p~~~~~~~~~-v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 195 (316)
T 3vh8_G 118 RKPSLLAHPGPL-VKSGERVILQCWSDI-MFEHFFLHKEGISKDPSRLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSV 195 (316)
T ss_dssp CCCEEEEESCSE-EETTCCEEEEEEESS-CCSEEEEEETTCCSCCEEEECEEETTEEEEEEEECSCCGGGCEEEEEEEEC
T ss_pred CCCeEEecCCCc-cCCCCeEEEEEcCCC-CCcEEEEEECCCccccceeeeeecCCCceEEEEECCCChhhCceEEEEEec
Confidence 467777766654 889999999999954 567899999875431
Q ss_pred -----------------Ee---eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCc
Q psy16426 52 -----------------AQ---VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNA 111 (194)
Q Consensus 52 -----------------v~---~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~ 111 (194)
|. .+|.+...+. ..+.+|+.+.|.|.+.. +.+.+.|++++..+.... .. .....+
T Consensus 196 ~~g~~~~s~~s~~~~l~V~~~~~~p~i~~~~~-~~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~~~~~~-~~-~~~~~~- 270 (316)
T 3vh8_G 196 THTPYQLSAPSDPLDIVVTGPYEKPSLSAQPG-PKVQAGESVTLSCSSRS-SYDMYHLSREGGAHERRL-PA-VRKVNR- 270 (316)
T ss_dssp TTCTTBCCCCCCCEEEEEECSSCCCEEEEESC-SCCCTTSCCEEEEEESS-CCSEEEEEETTSSCCEEE-EC-EECTTS-
T ss_pred CCCCccccCCCCCEEEEecCCCCCCeEEeCCC-CeecCCCcEEEEEECCC-CCcEEEEEECCCcCCCce-ec-eeccCC-
Confidence 10 1222332222 23567999999999974 678899999443322110 00 011111
Q ss_pred eeEEEEEEEeecCCCCCeEEEEEEEcCCCc-----eEEEEEEEcccCC
Q psy16426 112 YKIHMKLTIKAVTKQDFGAYKCVSKNSLGD-----TDGSIKLYGKKKK 154 (194)
Q Consensus 112 ~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~-----~~~~~~l~v~~~p 154 (194)
.....|.|.+++ |.|.|+|.+.|..+. .+..+.|.|...|
T Consensus 271 -~~~~~L~i~~v~--D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~p 315 (316)
T 3vh8_G 271 -TFQADFPLGPAT--HGGTYRCFGSFRHSPYEWSDPSDPLLVSVTGNP 315 (316)
T ss_dssp -CEEEEEECC-------CEEEEEEEBTTBTTEECCCCCCEEC------
T ss_pred -ceeEEEEcCCcC--CCEEEEEEeecCCCchhccCCCCcEEEEEeCCC
Confidence 124689999998 999999999997653 2345666665543
No 196
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.44 E-value=8.5e-13 Score=89.28 Aligned_cols=100 Identities=15% Similarity=0.111 Sum_probs=71.8
Q ss_pred eEEeccceeEEeeCCeEEEEEEeecc---CCCccEEEecCcEEe-e--CCCceeEE--ecCCceeEEEEEEEeecCCCCC
Q psy16426 57 MIWIQNQLVGAMEGDQMTLECHSEAY---PKSINYWTKENGEII-A--QGSKYEPI--LLDNAYKIHMKLTIKAVTKQDF 128 (194)
Q Consensus 57 ~i~~~~~~~~~~~g~~~~l~C~~~~~---p~p~v~W~~~~~~~~-~--~~~~~~~~--~~~~~~~~~~~L~i~~~~~~d~ 128 (194)
.+...+..+.+.+|+++.|.|.+.+. |.|.+.||+ +..+. . ...++... ..........+|.|.++...|.
T Consensus 9 ~F~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~K-gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~Da 87 (126)
T 2dav_A 9 LFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFK-GKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFA 87 (126)
T ss_dssp SCCSCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEE-SSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSC
T ss_pred EEEEcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEee-CcCcccCCCCCceEEEccccccccccceEEEEEccCCcccC
Confidence 34556677889999999999998764 789999999 43111 1 12222211 1111112356999999999999
Q ss_pred eEEEEEEEcCCCceEEEEEEEccc-CCCCC
Q psy16426 129 GAYKCVSKNSLGDTDGSIKLYGKK-KKKKK 157 (194)
Q Consensus 129 g~y~C~a~n~~g~~~~~~~l~v~~-~p~~p 157 (194)
|.|+|.+.|..|...+.+.|.|.. ++..|
T Consensus 88 G~Y~Cevsn~~g~~~~~~~L~V~~~~~~~p 117 (126)
T 2dav_A 88 GNYRCEVTYKDKFDSCSFDLEVHESTGTTP 117 (126)
T ss_dssp EEEEEEEECSSCEEEECCEEEEECCCCSCC
T ss_pred EEEEEEEEeCCCcEEEEEEEEEEecCCCCC
Confidence 999999999999999999999988 44444
No 197
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.44 E-value=7.9e-13 Score=88.30 Aligned_cols=85 Identities=18% Similarity=0.165 Sum_probs=65.0
Q ss_pred CeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEc
Q psy16426 71 DQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYG 150 (194)
Q Consensus 71 ~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v 150 (194)
....|.|.+.|.|.|.+.|++ ++..+..................++|.|.++..+|.|.|+|.|.|..|...+++.|.+
T Consensus 21 ~~~~l~C~~~g~P~p~i~W~k-~g~~l~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v 99 (118)
T 1wwc_A 21 LEHCIEFVVRGNPPPTLHWLH-NGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQTINGHF 99 (118)
T ss_dssp CEEEEEEEEECSSCCEEEEEE-TTEECCCSSSEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEEEECC
T ss_pred cceEEEEEeeeeCCCeEEEEE-CCEECCCCCceeEEEeccCccccEEEEECCCChhcCEEEEEEEECCCCeEeeEEEEEE
Confidence 567889999999999999999 5555554443332222211223568999999999999999999999999999999888
Q ss_pred ccCCCC
Q psy16426 151 KKKKKK 156 (194)
Q Consensus 151 ~~~p~~ 156 (194)
...|..
T Consensus 100 ~~~P~~ 105 (118)
T 1wwc_A 100 LKEPFP 105 (118)
T ss_dssp SCCCCC
T ss_pred ccCCCc
Confidence 776643
No 198
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.44 E-value=8.1e-12 Score=94.08 Aligned_cols=129 Identities=14% Similarity=0.238 Sum_probs=86.3
Q ss_pred cCCeEEEcCCeeeeeCCCcEEEEeeeecc--CCceeEEEecC-------------c------------------------
Q psy16426 8 VPPMIWIQNQLVGAMEGDQMTLECHSEAY--PKSINYWTKEN-------------G------------------------ 48 (194)
Q Consensus 8 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~--p~~~v~W~k~~-------------~------------------------ 48 (194)
.+|.+...+..+.+.+|++|+|.|.+.+. +.+.+.||+.. .
T Consensus 5 ~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 84 (256)
T 3juy_B 5 HHQVQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANT 84 (256)
T ss_dssp --CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTE
T ss_pred cceEEEEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCE
Confidence 46778888899999999999999999883 67789999731 0
Q ss_pred -eEE---------------Eee------------------------------------------CCeEEeccceeEEeeC
Q psy16426 49 -EII---------------AQV------------------------------------------PPMIWIQNQLVGAMEG 70 (194)
Q Consensus 49 -~l~---------------v~~------------------------------------------~p~i~~~~~~~~~~~g 70 (194)
.|. +.. ++.+...+....+.+|
T Consensus 85 ~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G 164 (256)
T 3juy_B 85 AYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSLSPG 164 (256)
T ss_dssp EEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEECTT
T ss_pred EEEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEEeCC
Confidence 011 111 1122333445567789
Q ss_pred CeEEEEEEeeccCC-CccEEEecC--cE--Ee-e--------CCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEE
Q psy16426 71 DQMTLECHSEAYPK-SINYWTKEN--GE--II-A--------QGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSK 136 (194)
Q Consensus 71 ~~~~l~C~~~~~p~-p~v~W~~~~--~~--~~-~--------~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~ 136 (194)
+++.|.|.+.+.+. +.+.|++.. .. .+ . ...++...... ...+|.|.+++.+|.|.|+|.+.
T Consensus 165 ~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~----~~~~L~I~~v~~~DsG~Y~C~~~ 240 (256)
T 3juy_B 165 ERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSG----TDFTLTITRVEPEDFALYYCQVY 240 (256)
T ss_dssp SCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET----TEEEEEESSCCGGGCSEEEEEEC
T ss_pred CCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccC----CEEEEEECCCCHhHCEEEEEEEe
Confidence 99999999998775 889998732 11 11 0 11222211111 14579999999999999999999
Q ss_pred cCCC
Q psy16426 137 NSLG 140 (194)
Q Consensus 137 n~~g 140 (194)
|...
T Consensus 241 ~~~~ 244 (256)
T 3juy_B 241 GASS 244 (256)
T ss_dssp CSSC
T ss_pred eCCC
Confidence 8543
No 199
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.44 E-value=4.2e-12 Score=95.03 Aligned_cols=127 Identities=17% Similarity=0.267 Sum_probs=83.0
Q ss_pred CeEEEcCCeeeeeCCCcEEEEeeeeccC-----CceeEEEecCc-------------------------------eEE--
Q psy16426 10 PMIWIQNQLVGAMEGDQMTLECHSEAYP-----KSINYWTKENG-------------------------------EII-- 51 (194)
Q Consensus 10 P~~~~~~~~~~v~~G~~v~L~C~~~g~p-----~~~v~W~k~~~-------------------------------~l~-- 51 (194)
..+...+.++.+.+|++++|.|.+.+.+ .+.+.|++++. .|.
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 81 (247)
T 1svz_A 2 ILMTQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKIS 81 (247)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEES
T ss_pred CcEEecCCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEEC
Confidence 3466778888999999999999999887 68999998421 011
Q ss_pred -----------------------------EeeC-------------CeEEeccceeEEeeCCeEEEEEEeeccC--CCcc
Q psy16426 52 -----------------------------AQVP-------------PMIWIQNQLVGAMEGDQMTLECHSEAYP--KSIN 87 (194)
Q Consensus 52 -----------------------------v~~~-------------p~i~~~~~~~~~~~g~~~~l~C~~~~~p--~p~v 87 (194)
|..+ +.....+....+.+|+.+.|.|.+.+.+ .+.+
T Consensus 82 ~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v 161 (247)
T 1svz_A 82 RVEAEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGETVKISCKATNYAFTDYSM 161 (247)
T ss_dssp SCCGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCE
T ss_pred CCCHHHCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCCcEEEEEEEcCcccCCcEE
Confidence 1111 1111122233477899999999998874 5689
Q ss_pred EEEecC-cE-E--e-e-------------CCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcC
Q psy16426 88 YWTKEN-GE-I--I-A-------------QGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNS 138 (194)
Q Consensus 88 ~W~~~~-~~-~--~-~-------------~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~ 138 (194)
.|++++ +. . . . ...++.... + ......+|.|.+++.+|.|.|+|.+.|.
T Consensus 162 ~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~-~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 162 HWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSL-D-TSTSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp EEEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEE-E-GGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred EEEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEE-e-cCCCEEEEEECCCChhHCEEEEEEEecc
Confidence 999843 11 1 0 0 011222111 0 0112458999999999999999999985
No 200
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.44 E-value=5.5e-13 Score=104.51 Aligned_cols=128 Identities=13% Similarity=0.117 Sum_probs=88.0
Q ss_pred CCeeeeeCCCcEEEEeeeeccCC-----------ceeEEEecCce----------------------EE-----------
Q psy16426 16 NQLVGAMEGDQMTLECHSEAYPK-----------SINYWTKENGE----------------------II----------- 51 (194)
Q Consensus 16 ~~~~~v~~G~~v~L~C~~~g~p~-----------~~v~W~k~~~~----------------------l~----------- 51 (194)
..++.+.+|+++.|.|.+.+.|. +.+.|++++.. |.
T Consensus 14 ~~~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~ 93 (349)
T 4dep_C 14 MRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLNDTGN 93 (349)
T ss_dssp CCCCEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEEEETTEEEESSCCGGGCEE
T ss_pred eeeEEEecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEeecCCEEEEccCChhhCEE
Confidence 46678999999999999997654 89999998731 10
Q ss_pred -------------------EeeCCeEE----eccceeEEeeCCeEEEEEEe-----eccCCCccEEEecCcEEeeCCCce
Q psy16426 52 -------------------AQVPPMIW----IQNQLVGAMEGDQMTLECHS-----EAYPKSINYWTKENGEIIAQGSKY 103 (194)
Q Consensus 52 -------------------v~~~p~i~----~~~~~~~~~~g~~~~l~C~~-----~~~p~p~v~W~~~~~~~~~~~~~~ 103 (194)
|..++.+. ..+....+.+|+.+.|.|.+ .+.|.+.+.|++ ++..+.....+
T Consensus 94 Y~C~a~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k-~~~~l~~~~~~ 172 (349)
T 4dep_C 94 YTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYM-GCYKIQNFNNV 172 (349)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEE-TTEECCSCSSE
T ss_pred EEEEEecCCceEEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEee-CCEECCCccce
Confidence 11111100 01123345679999999974 677889999999 55554332222
Q ss_pred eEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCC-Cce---EEEEEEEccc
Q psy16426 104 EPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSL-GDT---DGSIKLYGKK 152 (194)
Q Consensus 104 ~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~-g~~---~~~~~l~v~~ 152 (194)
..++ ..|.|.++..+|.|.|+|.+.|.. |.. ...+.|.|..
T Consensus 173 ---~~~~-----~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~ 217 (349)
T 4dep_C 173 ---IPEG-----MNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVG 217 (349)
T ss_dssp ---EEET-----TEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEEC
T ss_pred ---eecC-----CEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEc
Confidence 1111 379999999999999999999987 443 4566776654
No 201
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.44 E-value=2.5e-13 Score=90.67 Aligned_cols=94 Identities=21% Similarity=0.284 Sum_probs=72.1
Q ss_pred eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEE
Q psy16426 54 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKC 133 (194)
Q Consensus 54 ~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C 133 (194)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.....++. ... + ++|.|.++..+|.|.|+|
T Consensus 7 ~pP~i~~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~-~~~-~-----~~L~i~~v~~~D~G~Y~C 79 (118)
T 2eo9_A 7 GPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIK-QLE-N-----GVLQIRYAKLGDTGRYTC 79 (118)
T ss_dssp CSCCCSBCCCCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEE-EEE-T-----TEEEEESCCGGGCCCEEE
T ss_pred CCCEEEcCCCCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEE-Ecc-C-----CEEEEccCCcCCCEEEEE
Confidence 356666666777889999999999999999999999994433322233332 111 2 289999999999999999
Q ss_pred EEEcCCCceEEEEEEEcccCC
Q psy16426 134 VSKNSLGDTDGSIKLYGKKKK 154 (194)
Q Consensus 134 ~a~n~~g~~~~~~~l~v~~~p 154 (194)
.+.|..|.....+.|.|...+
T Consensus 80 ~a~n~~g~~~~~~~l~V~~~~ 100 (118)
T 2eo9_A 80 IASTPSGEATWSAYIEVQEFG 100 (118)
T ss_dssp EEECSSCEEEEECCEEEECCS
T ss_pred EEEcCCCcEEEEEEEEEEeCC
Confidence 999999998888778776554
No 202
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.44 E-value=4.5e-13 Score=98.63 Aligned_cols=86 Identities=13% Similarity=0.190 Sum_probs=57.2
Q ss_pred eeCCeE-EEEEEee-ccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEE
Q psy16426 68 MEGDQM-TLECHSE-AYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGS 145 (194)
Q Consensus 68 ~~g~~~-~l~C~~~-~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~ 145 (194)
..|+.+ .|.|.+. +.|.|.+.|++++..... .... ....++.+...+.|.|.++..+|.|.|+|.+.|..+.....
T Consensus 128 ~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~~-~~~~-~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~~ 205 (221)
T 3eow_R 128 LTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQ-TSQV-PGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQL 205 (221)
T ss_dssp CCSSSCCEEEEEEESCSSCCCEEEECSSSCCCC-CEEE-CCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCEE
T ss_pred cCCceEEEEEEECCCccCCCeeEEEeCCCCCCc-ccee-ecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCeE
Confidence 467777 5999987 788899999974322211 1010 01122334456789999999999999999999998876666
Q ss_pred EEEEcccCCCCC
Q psy16426 146 IKLYGKKKKKKK 157 (194)
Q Consensus 146 ~~l~v~~~p~~p 157 (194)
+.+. ..|..|
T Consensus 206 ~~v~--~~~~~~ 215 (221)
T 3eow_R 206 LTVS--LTVYYP 215 (221)
T ss_dssp EEEC--CCCCC-
T ss_pred EEEE--EEEEcc
Confidence 5554 444443
No 203
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.44 E-value=3.6e-13 Score=101.71 Aligned_cols=128 Identities=16% Similarity=0.200 Sum_probs=74.4
Q ss_pred CCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEec---Cc-----------------------------------eE
Q psy16426 9 PPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKE---NG-----------------------------------EI 50 (194)
Q Consensus 9 ~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~---~~-----------------------------------~l 50 (194)
+|.+...+.++.+.+|++|+|.|.+.+.+.+.+.||+. .. .|
T Consensus 2 s~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 81 (259)
T 3omz_A 2 SSNLEGRTKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRM 81 (259)
T ss_dssp ---------CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEE
T ss_pred ccccccCCceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEE
Confidence 57788888889999999999999999988889999982 10 01
Q ss_pred E---------------------------------Eee-----------------CCeEEeccceeEEeeCCeEEEEEEee
Q psy16426 51 I---------------------------------AQV-----------------PPMIWIQNQLVGAMEGDQMTLECHSE 80 (194)
Q Consensus 51 ~---------------------------------v~~-----------------~p~i~~~~~~~~~~~g~~~~l~C~~~ 80 (194)
. |.. ++.+...+....+.+|+++.|.|.+.
T Consensus 82 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~ 161 (259)
T 3omz_A 82 ILRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTLNCLYE 161 (259)
T ss_dssp EESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEECCEEE
T ss_pred EECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEEEEECC
Confidence 1 111 12333344456678999999999987
Q ss_pred cc-CCCccEEEecCc-E---EeeC---------CCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcC
Q psy16426 81 AY-PKSINYWTKENG-E---IIAQ---------GSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNS 138 (194)
Q Consensus 81 ~~-p~p~v~W~~~~~-~---~~~~---------~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~ 138 (194)
+. +.+.+.|++.+. . .... ..++. ..........+|.|.+++.+|.|.|+|.+.+.
T Consensus 162 ~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~--~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 231 (259)
T 3omz_A 162 TSWWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYS--VNFKKAAKSVALTISALQLEDSAKYFCALGES 231 (259)
T ss_dssp CCCSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEE--ECCBGGGTBCCEEESSCCGGGCSEEEEEEESC
T ss_pred CccCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEE--EEEcCcCCEEEEEECCCChhHCEEEEEEEeCc
Confidence 74 678899997432 1 1000 01221 11000111347999999999999999999853
No 204
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.44 E-value=5.7e-13 Score=108.00 Aligned_cols=133 Identities=14% Similarity=0.207 Sum_probs=87.6
Q ss_pred CCeEEEcCCeeeeeCCCcEEEEeeeecc-CCc-eeEEEecCceE--------------------E--------------E
Q psy16426 9 PPMIWIQNQLVGAMEGDQMTLECHSEAY-PKS-INYWTKENGEI--------------------I--------------A 52 (194)
Q Consensus 9 ~P~~~~~~~~~~v~~G~~v~L~C~~~g~-p~~-~v~W~k~~~~l--------------------~--------------v 52 (194)
+|.+...+....+.+|++++|.|.+.|. |.+ .|.|++++..+ . +
T Consensus 123 ~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~dg~Y~C~a 202 (444)
T 1igt_B 123 APSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNV 202 (444)
T ss_dssp CCEEEEECCCSSCCCSSCEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEECSTTTTTSCCEEEE
T ss_pred CCceeEecccccCCCCCcEEEEEEEcceeCCCcEEEEecCCCCCCeEecCccccCCcEEEEEEEEEchhhcCCCeEEEEE
Confidence 5666544433446789999999999885 766 99999986541 0 0
Q ss_pred e---------------------------------eCCeEEeccceeE--EeeCCeEEEEEEeeccC----CCccEEEecC
Q psy16426 53 Q---------------------------------VPPMIWIQNQLVG--AMEGDQMTLECHSEAYP----KSINYWTKEN 93 (194)
Q Consensus 53 ~---------------------------------~~p~i~~~~~~~~--~~~g~~~~l~C~~~~~p----~p~v~W~~~~ 93 (194)
. .+|.+...+.... +.+|+.+.|.|.+.+.+ .+.+.|+++
T Consensus 203 ~n~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~- 281 (444)
T 1igt_B 203 AHPASSTKVDKKIEPRGPTIKPCPPCKCPAPNLLGGPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVN- 281 (444)
T ss_dssp EETTTTEEEEEECCCCCCSCCCCCCCSCCCSCCCCCCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEET-
T ss_pred EeCCCCcceEEEeccCCCCcccCCccccCCcccCCCceEEecCCchhheeecCCCcEEEEEEeecccCCCCeEEEEEEC-
Confidence 0 0222211111111 36799999999999874 358999994
Q ss_pred cEEeeCCC-ceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCce
Q psy16426 94 GEIIAQGS-KYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDT 142 (194)
Q Consensus 94 ~~~~~~~~-~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~ 142 (194)
+....... .......++.+...+.|.|.++..+|.|.|+|.|.|..+..
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~ 331 (444)
T 1igt_B 282 NVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNKDLPA 331 (444)
T ss_dssp TEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEEEECTTCSS
T ss_pred CccccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcEEEEEEcCCCCC
Confidence 44433221 11112233344567799999999999999999999998876
No 205
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.43 E-value=1e-12 Score=105.89 Aligned_cols=137 Identities=15% Similarity=0.265 Sum_probs=90.1
Q ss_pred eEEEcCCeeeeeCCCcEEEEeeeeccCC----ceeEEEecC--c-----------------------------eEE----
Q psy16426 11 MIWIQNQLVGAMEGDQMTLECHSEAYPK----SINYWTKEN--G-----------------------------EII---- 51 (194)
Q Consensus 11 ~~~~~~~~~~v~~G~~v~L~C~~~g~p~----~~v~W~k~~--~-----------------------------~l~---- 51 (194)
.++..+.++.+.+|++++|.|.+.+.+. +.+.||+++ . .|.
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 82 (438)
T 1qgc_4 3 VLTQSPASLAVSLGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSRTDFTLTIDPV 82 (438)
T ss_dssp CEEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEETTEEEEEESSC
T ss_pred ceEecCCeEEeeCCCCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccCCcEEEEeCCC
Confidence 4666788889999999999999988876 489999963 1 011
Q ss_pred ---------------------------Ee---eCCeEEeccceeEEeeCCeEEEEEEeec-cCCC-ccEEEecCcEEeeC
Q psy16426 52 ---------------------------AQ---VPPMIWIQNQLVGAMEGDQMTLECHSEA-YPKS-INYWTKENGEIIAQ 99 (194)
Q Consensus 52 ---------------------------v~---~~p~i~~~~~~~~~~~g~~~~l~C~~~~-~p~p-~v~W~~~~~~~~~~ 99 (194)
|. .+|.+...........|..+.|.|.+.+ .|.+ .+.|++ ++..+..
T Consensus 83 ~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k-~g~~~~~ 161 (438)
T 1qgc_4 83 EADDVATYYCQQSNEVPLTFGAGTKLDLKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKI-DGSERQN 161 (438)
T ss_dssp CGGGCEEEEEEECSSTTCCBCCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEE-TTEEECT
T ss_pred cCcCCeeEEEEEecCCCccccCceeEEecCCCCCCEEEecCCChhhccCCceEEEEEEccccCCCcEEEEEE-CCEEcCC
Confidence 11 1233322211111235789999999987 5666 799999 5555443
Q ss_pred CCceeEE---ecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEEEEE
Q psy16426 100 GSKYEPI---LLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKL 148 (194)
Q Consensus 100 ~~~~~~~---~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l 148 (194)
....... ..+..+...+.|.|.++..+|.|.|+|.|.|..+.......+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~ 213 (438)
T 1qgc_4 162 GVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSF 213 (438)
T ss_dssp TEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCEEEEE
T ss_pred CceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCceeccc
Confidence 3111111 122334456789999999999999999999988875433333
No 206
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.42 E-value=1.6e-12 Score=84.64 Aligned_cols=94 Identities=19% Similarity=0.328 Sum_probs=70.8
Q ss_pred eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEE
Q psy16426 54 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKC 133 (194)
Q Consensus 54 ~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C 133 (194)
.+|.+........+.+|+.+.|.|.+.+ +.+.+.|++ ++..+....++.... +.. ...|.|.++..+|.|.|+|
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k-~g~~~~~~~~~~~~~-~~~---~~~L~I~~v~~~D~G~Y~C 80 (103)
T 2edf_A 7 GPAAIIKPLEDQWVAPGEDVELRCELSR-AGTPVHWLK-DRKAIRKSQKYDVVC-EGT---MAMLVIRGASLKDAGEYTC 80 (103)
T ss_dssp CCCCEEECCCCEEECTTSCEEECCEESS-SSCCCCEEE-SSCBCCCSSSEEEEE-ETT---EEEEEESSCCTTTCSEEEE
T ss_pred CCcEEEecCCccEEcCCCCEEEEEEEeC-CCCcEEEEE-CCEEccCCCCEEEEE-CCC---EEEEEECCCCcccCEEEEE
Confidence 3666776777788899999999999987 778899999 555444444444322 221 4589999999999999999
Q ss_pred EEEcCCCceEEEEEEEcccCCCCC
Q psy16426 134 VSKNSLGDTDGSIKLYGKKKKKKK 157 (194)
Q Consensus 134 ~a~n~~g~~~~~~~l~v~~~p~~p 157 (194)
.+.| ....+.|.|...|..|
T Consensus 81 ~a~n----~~~~~~l~V~~~p~~~ 100 (103)
T 2edf_A 81 EVEA----SKSTASLHVEEKASGP 100 (103)
T ss_dssp ECSS----CEEEEEEEECCCSSSS
T ss_pred EEcc----CCcEEEEEEeCCCCCC
Confidence 9999 3566777777776655
No 207
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.42 E-value=3e-13 Score=104.47 Aligned_cols=118 Identities=14% Similarity=0.177 Sum_probs=83.4
Q ss_pred CeeeeeCCCcEEEEeeeeccC-CceeEEEecCceEE--------------------------------------------
Q psy16426 17 QLVGAMEGDQMTLECHSEAYP-KSINYWTKENGEII-------------------------------------------- 51 (194)
Q Consensus 17 ~~~~v~~G~~v~L~C~~~g~p-~~~v~W~k~~~~l~-------------------------------------------- 51 (194)
..+.+.+|+++.|.|.+.+.+ .+.+.|++++....
T Consensus 13 ~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~ 92 (315)
T 1itb_B 13 IILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKI 92 (315)
T ss_dssp CCCEEETTSCCCCBCCCCSCCCSSCCCEECTTSCSCSCCCTTSSSEECSSBEECTTCCGGGCSCCEECCCSSSCCCCEEC
T ss_pred eEEEEcCCCcEEEEeeccCcCCCceEEEEeCCCcCccccccCCcEeccCCeEEECCCChhhCEEEEEEEeCCceEEEEEE
Confidence 346789999999999999887 78999999875311
Q ss_pred ----EeeCCeEEecc---ceeEEeeCCeEEEEEEe------eccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEE
Q psy16426 52 ----AQVPPMIWIQN---QLVGAMEGDQMTLECHS------EAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKL 118 (194)
Q Consensus 52 ----v~~~p~i~~~~---~~~~~~~g~~~~l~C~~------~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 118 (194)
+..+|.+...+ ....+..|+.+.|.|.+ .+.|.+.+.|++ ++..+..... ..... ...|
T Consensus 93 ~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k-~~~~l~~~~~-~~~~~------~~~L 164 (315)
T 1itb_B 93 SAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYK-DCKPLLLDNI-HFSGV------KDRL 164 (315)
T ss_dssp CCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEE-TTEECCCCSS-SEEEE------TTEE
T ss_pred EEEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEE-CCEECCCccc-eEeec------CceE
Confidence 11122211111 12446789999999998 788899999999 5544432211 11111 2389
Q ss_pred EEeecCCCCCeEEEEEEE-cCCCce
Q psy16426 119 TIKAVTKQDFGAYKCVSK-NSLGDT 142 (194)
Q Consensus 119 ~i~~~~~~d~g~y~C~a~-n~~g~~ 142 (194)
.|.++..+|.|.|+|.+. |..|..
T Consensus 165 ~i~~v~~~d~G~Y~C~a~~n~~g~~ 189 (315)
T 1itb_B 165 IVMNVAEKHRGNYTCHASYTYLGKQ 189 (315)
T ss_dssp EESSCCGGGCEEEEEEEEEEETTEE
T ss_pred EEEeceehhCcEEEEEEEcCCCCcE
Confidence 999999999999999999 788876
No 208
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.41 E-value=6.2e-14 Score=94.30 Aligned_cols=102 Identities=22% Similarity=0.401 Sum_probs=75.4
Q ss_pred EeeCCeEEeccceeEEeeCCeEEEEEEeeccCCCc-cEEEecCcEEee-CCCceeEEecCCceeEEEEEEEeecCCCCC-
Q psy16426 52 AQVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSI-NYWTKENGEIIA-QGSKYEPILLDNAYKIHMKLTIKAVTKQDF- 128 (194)
Q Consensus 52 v~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~-v~W~~~~~~~~~-~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~- 128 (194)
|.++|.|.. +....+.+|+.+.|.|.+.+.|.|. +.|++++..+.. ...++............+.|.|.++..+|.
T Consensus 11 V~~~P~i~~-~~~~~~~~G~~v~l~C~~~g~P~p~~i~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~~ 89 (122)
T 2cry_A 11 VNGPPIISS-TQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTISNIVRADFQ 89 (122)
T ss_dssp CCSSCCEEE-ECCCCCCTTSCCCCCEEECCSSCCSEEEEESSSCEECSEEETTEEEEEEEETTEEEEEEECTTCCHHHHH
T ss_pred EecCCCccC-CCeEEEecCCCEEEEEEEeecCCCcEeEEEECCEEccCCCCCCEEEEEecCCCceEEEEEEcCCChhhCC
Confidence 556787776 6667788999999999999999987 999994433322 123333211111112256899999999998
Q ss_pred eEEEEEEEcCCCceEEEEEEEcccCC
Q psy16426 129 GAYKCVSKNSLGDTDGSIKLYGKKKK 154 (194)
Q Consensus 129 g~y~C~a~n~~g~~~~~~~l~v~~~p 154 (194)
|.|+|.|.|.+|...+.+.|.|...+
T Consensus 90 G~Y~C~a~N~~G~~~~~~~l~V~~~~ 115 (122)
T 2cry_A 90 TIYNCTAWNSFGSDTEIIRLKEQGSE 115 (122)
T ss_dssp SCEEEEEECSSCEEEEEECCCCSCSS
T ss_pred ceEEEEEECCCCeEEEEEEEEECCCC
Confidence 99999999999999999999887543
No 209
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.41 E-value=1.5e-12 Score=95.74 Aligned_cols=76 Identities=18% Similarity=0.285 Sum_probs=53.4
Q ss_pred eeCCeEEEEEEeecc-CCC-ccEEEecCcEE--eeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceE
Q psy16426 68 MEGDQMTLECHSEAY-PKS-INYWTKENGEI--IAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTD 143 (194)
Q Consensus 68 ~~g~~~~l~C~~~~~-p~p-~v~W~~~~~~~--~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~ 143 (194)
.+|+.+.|.|.+.+. |.| .+.|++++... ..... ....+.+...+.|.|.....+| |.|+|.|.|..|...
T Consensus 138 ~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~----~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~ 212 (220)
T 1pz5_B 138 TSGSSVTLGCLVKGYFPEPVTVKWNYGALSSGVRTVSS----VLQSGFYSLSSLVTVPSSTWPS-QTVICNVAHPASKVD 212 (220)
T ss_dssp SCSSSEEEEEEEEEEBSSCCEEEEGGGTCCTTEEECCC----EEETTEEEEEEEEEECGGGTTT-SCCEEEEEEGGGTEE
T ss_pred CCCCcEEEEEEEEEEeCCCeEEEEecCCcccceEEcCC----cccCCeEEEEEEEEEcchhcCC-ceEEEEEEECCccEe
Confidence 468899999999987 878 89999854320 11110 1111334456789999888766 999999999999876
Q ss_pred EEEEE
Q psy16426 144 GSIKL 148 (194)
Q Consensus 144 ~~~~l 148 (194)
.++.+
T Consensus 213 ~~~~~ 217 (220)
T 1pz5_B 213 LIKEI 217 (220)
T ss_dssp EEEEC
T ss_pred eeecC
Confidence 66544
No 210
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.41 E-value=3.6e-12 Score=93.91 Aligned_cols=78 Identities=17% Similarity=0.317 Sum_probs=54.2
Q ss_pred eeCCeEEEEEEeecc-CCC-ccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEE
Q psy16426 68 MEGDQMTLECHSEAY-PKS-INYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGS 145 (194)
Q Consensus 68 ~~g~~~~l~C~~~~~-p~p-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~ 145 (194)
..|+.+.|.|.+.+. |.| .+.|+++ +..+... .......++.+...+.|.|.++...| |.|+|.|.|..|.....
T Consensus 140 ~~g~~v~L~C~~~g~~P~p~~v~W~~~-g~~~~~~-~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~~ 216 (222)
T 1q9r_B 140 QTNSMVTLGCLVKGYFPEPVTVTWNSG-SLSSGVH-TFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVD 216 (222)
T ss_dssp CCSSEEEEEEEEEEEBSSCCEEEEGGG-TBCTTEE-EEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEE
T ss_pred cCCCcEEEEEEEccEECCCCEEEEecC-CeEcceE-eccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCCcEE
Confidence 368899999999986 777 8999984 4322111 11112223345556789999998889 99999999998876554
Q ss_pred EEE
Q psy16426 146 IKL 148 (194)
Q Consensus 146 ~~l 148 (194)
..+
T Consensus 217 ~~i 219 (222)
T 1q9r_B 217 KKI 219 (222)
T ss_dssp EEC
T ss_pred Eec
Confidence 443
No 211
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.41 E-value=7.8e-12 Score=90.51 Aligned_cols=63 Identities=17% Similarity=0.326 Sum_probs=44.7
Q ss_pred eCC-eEEEEEEeecc-CCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCC-CCeEEEEEEEcCCCceEEE
Q psy16426 69 EGD-QMTLECHSEAY-PKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQ-DFGAYKCVSKNSLGDTDGS 145 (194)
Q Consensus 69 ~g~-~~~l~C~~~~~-p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~-d~g~y~C~a~n~~g~~~~~ 145 (194)
.|. .+.|.|.+.+. |.|.+.|++ ++..+... ..|.|...... |.|.|+|.|.|..|.....
T Consensus 122 ~g~~~v~L~C~~~g~~p~p~i~W~~-~g~~l~~~---------------~~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~~ 185 (193)
T 2if7_A 122 NMTCELHLTCSVEDADDNVSFRWEA-LGNTLSSQ---------------PNLTVSWDPRISSEQDYTCIAENAVSNLSFS 185 (193)
T ss_dssp CSSEEEEEEEEEESCCTTCEEEEEE-TTEEEESS---------------SEEEEEECTTTCSCCEEEEEEEETTEEEEEE
T ss_pred CCCceEEEEEEEecCCCceEEEEEe-CCEEcCCC---------------CeEEEEeccCcCCCCcEEEEEECCCCccccc
Confidence 354 79999999985 478999999 55433221 14555544444 8999999999999987665
Q ss_pred EE
Q psy16426 146 IK 147 (194)
Q Consensus 146 ~~ 147 (194)
+.
T Consensus 186 ~~ 187 (193)
T 2if7_A 186 VS 187 (193)
T ss_dssp EE
T ss_pred cc
Confidence 43
No 212
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.40 E-value=2.1e-12 Score=97.53 Aligned_cols=86 Identities=22% Similarity=0.274 Sum_probs=56.3
Q ss_pred EEeeCCeEEEEEEeeccCCCccEEEec--CcEE---eeC--------CCceeEEecCCceeEEEEEEEeecCCCCCeEEE
Q psy16426 66 GAMEGDQMTLECHSEAYPKSINYWTKE--NGEI---IAQ--------GSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYK 132 (194)
Q Consensus 66 ~~~~g~~~~l~C~~~~~p~p~v~W~~~--~~~~---~~~--------~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~ 132 (194)
.+.+|+.+.|.|.+.+.+.+.++|++. +..+ ... ..++..... ....+|.|.++..+|.|.|+
T Consensus 150 ~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~----~~~~~L~I~~v~~~D~G~Y~ 225 (257)
T 1f3r_B 150 SASVGDRVTLSCKGSQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGS----GTDYTLTISSLQPEDVATYF 225 (257)
T ss_dssp CCCTTCCEEEEEECSSCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE----BTEEEEEECSCCGGGCSEEE
T ss_pred EEcCCCCEEEEEEECCcCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecC----CCEEEEEECCCChhhCEEEE
Confidence 356799999999999988889999983 2211 100 122221111 12458999999999999999
Q ss_pred EEEEcCCCceEEEEEEEcccCCC
Q psy16426 133 CVSKNSLGDTDGSIKLYGKKKKK 155 (194)
Q Consensus 133 C~a~n~~g~~~~~~~l~v~~~p~ 155 (194)
|.+.|..........|.|...+.
T Consensus 226 C~a~n~~~~~g~gt~l~V~~~~~ 248 (257)
T 1f3r_B 226 CYQYNNGYTFGAGTKLELKAAEQ 248 (257)
T ss_dssp EEEESSSEEECCCCEECCSSSCC
T ss_pred EEEeCCCCeECCCEEEEEeCCCc
Confidence 99999751122234566655443
No 213
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.40 E-value=2.3e-11 Score=93.02 Aligned_cols=84 Identities=20% Similarity=0.298 Sum_probs=54.7
Q ss_pred eeEEeeCCeEEEEEEeeccCCCccEEEec--CcEE--e-e--------CCCceeEEecCCceeEEEEEEEeecCCCCCeE
Q psy16426 64 LVGAMEGDQMTLECHSEAYPKSINYWTKE--NGEI--I-A--------QGSKYEPILLDNAYKIHMKLTIKAVTKQDFGA 130 (194)
Q Consensus 64 ~~~~~~g~~~~l~C~~~~~p~p~v~W~~~--~~~~--~-~--------~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~ 130 (194)
...+.+|+.+.|.|.+.+.+ +.++|++. +..+ . . ...++...... ...+|.|.++..+|.|.
T Consensus 171 ~~~v~~G~~v~L~C~~~~~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~----~~~~L~I~~v~~~DsG~ 245 (282)
T 1qok_A 171 IMSASPGEKVTITCSASSSV-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSG----TSYSLTISRMEAEDAAT 245 (282)
T ss_dssp EEEECTTCCEEEEEEESSCC-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET----TEEEEEESSCCGGGCEE
T ss_pred EEEEcCCCcEEEEEEecCCC-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCC----CEEEEEEccCChhHCEE
Confidence 44567899999999999988 89999983 2211 0 0 01223211111 14589999999999999
Q ss_pred EEEEEEcCCCce-EEEEEEEccc
Q psy16426 131 YKCVSKNSLGDT-DGSIKLYGKK 152 (194)
Q Consensus 131 y~C~a~n~~g~~-~~~~~l~v~~ 152 (194)
|+|.+.|..+.. .....|.|..
T Consensus 246 Y~C~a~~~~~~~fg~gt~l~V~~ 268 (282)
T 1qok_A 246 YYCQQRSSYPLTFGAGTKLELKR 268 (282)
T ss_dssp EEEEECSSSSCEECCCEEEEEC-
T ss_pred EEEEEeeCCCceEeCCEEEEEec
Confidence 999998854322 2235565543
No 214
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.40 E-value=4.3e-12 Score=82.62 Aligned_cols=89 Identities=27% Similarity=0.339 Sum_probs=64.8
Q ss_pred EEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCC--ceeEEecCCceeEEEEEEEeecCCCCCeEEEEEE
Q psy16426 58 IWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGS--KYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVS 135 (194)
Q Consensus 58 i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~--~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a 135 (194)
+...+..+.+.+|+.+.|.|.+.+ +.+.+.|++ ++..+.... ++....... ...|.|.++..+|.|.|+|.+
T Consensus 10 ~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k-~g~~l~~~~~~~~~~~~~~~----~~~L~I~~~~~~D~G~Y~C~a 83 (103)
T 1x44_A 10 VTKQLEDTTAYCGERVELECEVSE-DDANVKWFK-NGEEIIPGPKSRYRIRVEGK----KHILIIEGATKADAAEYSVMT 83 (103)
T ss_dssp CSBCCCCEEEETTEEEEEEEECSS-SSCCCEEEE-TTEECCCSTTCSEEEEEETT----EEEEEEEEECTTTCSEEEEEE
T ss_pred eeccCCCEEEECCCCEEEEEEecC-CCCeEEEEE-CCEECCCCCceEEEEEEcCC----EEEEEECCCCcccCEEEEEEE
Confidence 444556677889999999999977 778999999 555554444 333222211 368999999999999999999
Q ss_pred EcCCCceEEEEEEEcccCCCC
Q psy16426 136 KNSLGDTDGSIKLYGKKKKKK 156 (194)
Q Consensus 136 ~n~~g~~~~~~~l~v~~~p~~ 156 (194)
.| ......|.|...|..
T Consensus 84 ~n----~~~~~~l~V~~~p~p 100 (103)
T 1x44_A 84 TG----GQSSAKLSVDLKSGP 100 (103)
T ss_dssp TT----EEEEEEEEEECCCSC
T ss_pred CC----CcEEEEEEEeCCCCC
Confidence 88 455666777666554
No 215
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.40 E-value=3.7e-13 Score=97.00 Aligned_cols=59 Identities=19% Similarity=0.365 Sum_probs=47.2
Q ss_pred eCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCce
Q psy16426 69 EGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDT 142 (194)
Q Consensus 69 ~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~ 142 (194)
+|+.+.|.|.+ |.|.+.|++ ++..+..... . ...|.|.++..+|.|.|+|.|.|..|..
T Consensus 121 ~G~~v~l~C~~---p~p~i~W~k-~g~~i~~~~~------~-----~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 121 GDGSVLLTCGL---TDKTIKWLK-DGSIISPLNA------T-----KNTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp SSCEEEEECSS---SCSCEEEEE-TTEECCCSSC------C-----SSCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred CCCeEEEEeeC---CCCeEEEEE-CCEECcccCC------C-----cceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 89999999988 788999999 5554432211 1 2488999999999999999999998765
No 216
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.40 E-value=7.3e-12 Score=80.30 Aligned_cols=87 Identities=16% Similarity=0.107 Sum_probs=64.5
Q ss_pred CCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEE
Q psy16426 55 PPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCV 134 (194)
Q Consensus 55 ~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~ 134 (194)
++.|........+.+|+.+.|.|.+.+ +++.+.|++ ++..+....++.+..... ..+|.|.++..+|.|.|+|.
T Consensus 5 ~~~~~~~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k-~g~~i~~~~~~~i~~~g~----~~~L~I~~v~~~D~G~Y~C~ 78 (93)
T 1waa_A 5 LIEVEKPLYGVEVFVGETAHFEIELSE-PDVHGQWKL-KGQPLAASPDCEIIEDGK----KHILILHNCQLGMTGEVSFQ 78 (93)
T ss_dssp CCCEEECCCCEEEETTSCEEEEEEESS-SSCCCEEEE-TTEECCCBTTEEEEEETT----EEEEEECSCCGGGCEEEEEE
T ss_pred CcEeeccCcceEEeCCCCEEEEEEECC-CCCeEEEEE-CCEECcCCCCEEEEEECC----EEEEEECCCChhhCEEEEEE
Confidence 566776777888999999999999976 557899999 666655555554332221 35899999999999999999
Q ss_pred EEcCCCceEEEEEEEcc
Q psy16426 135 SKNSLGDTDGSIKLYGK 151 (194)
Q Consensus 135 a~n~~g~~~~~~~l~v~ 151 (194)
|.|.. .+..|.|.
T Consensus 79 a~n~~----~sa~L~V~ 91 (93)
T 1waa_A 79 AANTK----SAANLKVK 91 (93)
T ss_dssp ETTEE----EEEEEEEE
T ss_pred ECCCc----EEEEEEEE
Confidence 98853 34445443
No 217
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.39 E-value=2.7e-13 Score=100.52 Aligned_cols=77 Identities=14% Similarity=0.300 Sum_probs=52.7
Q ss_pred eCCeEEEEEEeeccCCC--ccEEEecCcEEeeCCCceeE--EecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEE
Q psy16426 69 EGDQMTLECHSEAYPKS--INYWTKENGEIIAQGSKYEP--ILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDG 144 (194)
Q Consensus 69 ~g~~~~l~C~~~~~p~p--~v~W~~~~~~~~~~~~~~~~--~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~ 144 (194)
.|+.+.|.|.+.+.+++ .+.|++ ++..+........ ...++.+...+.|.|.++..+|.|.|+|.+.|..+....
T Consensus 149 ~g~~v~L~C~~~g~~p~~~~v~W~k-~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~ 227 (234)
T 2j6e_L 149 QANKATLVCLISDFFPGAVTVAWKA-DGAPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEK 227 (234)
T ss_dssp TTSCCCEEECCCBCSSCCCEEEEEE-TTEECCSSEEECCCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCCCE
T ss_pred cCCceEEEEEEEEEcCCceEEEEEE-CCEECCCCccccCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCceEE
Confidence 47789999999886543 799999 5555433211100 112233444578999999999999999999998876554
Q ss_pred EE
Q psy16426 145 SI 146 (194)
Q Consensus 145 ~~ 146 (194)
++
T Consensus 228 ~~ 229 (234)
T 2j6e_L 228 TV 229 (234)
T ss_dssp EE
T ss_pred ec
Confidence 43
No 218
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.39 E-value=1.8e-12 Score=84.49 Aligned_cols=93 Identities=13% Similarity=0.226 Sum_probs=65.7
Q ss_pred CCeEEeccce---eEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEE
Q psy16426 55 PPMIWIQNQL---VGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAY 131 (194)
Q Consensus 55 ~p~i~~~~~~---~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y 131 (194)
+|.+...+.. +.+.+|+.+.|.|.+.+.+.+ +.|++ ++..+....++....... ...|.|.++..+|.|.|
T Consensus 7 ~P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k-~g~~~~~~~~~~~~~~~~----~~~L~I~~~~~~D~G~Y 80 (104)
T 2e6p_A 7 GPVHILSPQDKVSLTFTTSERVVLTCELSRVDFP-ATWYK-DGQKVEESELLVVKMDGR----KHRLILPEAKVQDSGEF 80 (104)
T ss_dssp SSCCCCBCCSCEEEEEESSSCEECCEECSSTTCC-CEEEE-TTEECCCBTTBEEEEETT----EEEEEESSCCTTTCEEE
T ss_pred CCCEEECCCCCccEEEeCCCcEEEEEEecCCCCc-cEEee-CCEECCCCCCEEEEeCCC----EEEEEECCCChhhCEEE
Confidence 4444444444 678899999999999998888 99999 555554444443222221 45899999999999999
Q ss_pred EEEEEcCCCceEEEEEEEcccCCCCC
Q psy16426 132 KCVSKNSLGDTDGSIKLYGKKKKKKK 157 (194)
Q Consensus 132 ~C~a~n~~g~~~~~~~l~v~~~p~~p 157 (194)
+|.+.|..+ .+.|.|...|..|
T Consensus 81 ~C~a~n~~~----~~~l~V~~~P~pp 102 (104)
T 2e6p_A 81 ECRTEGVSA----FFGVTVQDPSGPS 102 (104)
T ss_dssp EEECSSCCC----CEEEEEECCCCSS
T ss_pred EEEECCceE----EEEEEEcCCCCCc
Confidence 999999744 4455555555544
No 219
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.38 E-value=1.8e-11 Score=92.85 Aligned_cols=129 Identities=18% Similarity=0.297 Sum_probs=85.5
Q ss_pred cCCeEEEcCCeeeeeCCCcEEEEeeeeccC------CceeEEEecC--c-----------------------------eE
Q psy16426 8 VPPMIWIQNQLVGAMEGDQMTLECHSEAYP------KSINYWTKEN--G-----------------------------EI 50 (194)
Q Consensus 8 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p------~~~v~W~k~~--~-----------------------------~l 50 (194)
..+.+...+.++.+.+|++|+|.|.+.+.+ .+.+.||+.+ . .|
T Consensus 4 ~~~~v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L 83 (264)
T 2gjj_A 4 ADIVLTQTPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTL 83 (264)
T ss_dssp CCCCEEEECSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEE
T ss_pred cccceEecCCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEE
Confidence 457788888889999999999999998877 6789999842 1 01
Q ss_pred E-------------------------------EeeCC------------------eE-EeccceeEEeeCCeEEEEEEee
Q psy16426 51 I-------------------------------AQVPP------------------MI-WIQNQLVGAMEGDQMTLECHSE 80 (194)
Q Consensus 51 ~-------------------------------v~~~p------------------~i-~~~~~~~~~~~g~~~~l~C~~~ 80 (194)
. |..+| .+ ........+.+|+.+.|.|.+.
T Consensus 84 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~ 163 (264)
T 2gjj_A 84 TIGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPEVVKTGASVKISCKAS 163 (264)
T ss_dssp EESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEECCCEEECTTCCEEEEEEEE
T ss_pred EECCCCHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCCEEEcCCCcEEEEEEEe
Confidence 1 22221 11 1112223577899999999998
Q ss_pred ccCC--CccEEEecC-c---EEee----C----------CCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcC
Q psy16426 81 AYPK--SINYWTKEN-G---EIIA----Q----------GSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNS 138 (194)
Q Consensus 81 ~~p~--p~v~W~~~~-~---~~~~----~----------~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~ 138 (194)
+.+. +.+.|++++ + ..+. . ..++.... +. .....+|.|.++..+|.|.|+|.+.|.
T Consensus 164 ~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~-~~-~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 164 GYSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTV-DT-SSSTAFMQLNSLTSEDSADYYCVRSGN 239 (264)
T ss_dssp SSCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEE-ET-TTTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred CCccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEE-cC-CCCEEEEEECcCCcccCEEEEEEEecC
Confidence 8763 789999853 1 1110 0 11222111 00 012468999999999999999999985
No 220
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.38 E-value=2.2e-12 Score=96.12 Aligned_cols=134 Identities=13% Similarity=0.227 Sum_probs=85.7
Q ss_pred cCCeEE-EcCCeeeeeCCCcEEEEeeeecc-CC-c-eeEEEecCceE---------------------E-----------
Q psy16426 8 VPPMIW-IQNQLVGAMEGDQMTLECHSEAY-PK-S-INYWTKENGEI---------------------I----------- 51 (194)
Q Consensus 8 ~~P~~~-~~~~~~~v~~G~~v~L~C~~~g~-p~-~-~v~W~k~~~~l---------------------~----------- 51 (194)
.+|.+. ..+....+.+|++++|.|.+.|. |. + .|+|++++..+ +
T Consensus 11 ~~P~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D~g 90 (231)
T 2w59_A 11 SPIQLYAIPPSPGELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSGE 90 (231)
T ss_dssp -CCEEEEECCCHHHHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTC
T ss_pred CCCEEEEeCcChhhcccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhccCCC
Confidence 456654 55666777899999999999985 63 4 99999876544 1
Q ss_pred ------------------Ee------eCCeEEeccceeEEeeCCeEEEEEEeeccCC--CccEEEecCcEEeeCCCcee-
Q psy16426 52 ------------------AQ------VPPMIWIQNQLVGAMEGDQMTLECHSEAYPK--SINYWTKENGEIIAQGSKYE- 104 (194)
Q Consensus 52 ------------------v~------~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~--p~v~W~~~~~~~~~~~~~~~- 104 (194)
+. .+|.+.+.........+..+.|.|.+.++++ +.+.|++ ++..+.......
T Consensus 91 ~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k-~g~~l~~~~~~~~ 169 (231)
T 2w59_A 91 RFTCTVQHEELPLPLSKSVYRNTGPTTPPLIYPFAPHPEELSLSRVTLSCLVRGFRPRDIEIRWLR-DHRAVPATEFVTT 169 (231)
T ss_dssp CEEEEEECTTCSSCEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEE-TTEECCGGGCEEC
T ss_pred EEEEEEEcCCCCCceEEEEecCCCCCcCCEEEEeCCCHHHhccCceEEEEEEEeccCCCcEEEEEE-CCEECCCcccccC
Confidence 11 1232222111101122567999999998643 5789999 555543322111
Q ss_pred -EEe---------cC-CceeEEEEEEEeecCCCCCeEEEEEEEcCCCce
Q psy16426 105 -PIL---------LD-NAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDT 142 (194)
Q Consensus 105 -~~~---------~~-~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~ 142 (194)
... .+ +.|...+.|.|......|.|.|+|.+.|.....
T Consensus 170 ~~~~~~~~~~~~~~d~gt~~~~s~L~i~~~~~~~~g~YtC~v~n~~l~~ 218 (231)
T 2w59_A 170 AVLPEERTANGAGGDGDTFFVYSKMSVETAKWNGGTVFACMAVHEALPM 218 (231)
T ss_dssp CCEECCTTSCC---CCCCEEEEEEEEEEHHHHHTTCCEEEEEECTTSTT
T ss_pred ccccCcccccccCCCCCeEEEEEEEEEeHHHcCCCCcEEEEEEcCCCCC
Confidence 011 23 456667789999888888999999999987543
No 221
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.38 E-value=6.6e-12 Score=94.43 Aligned_cols=73 Identities=14% Similarity=0.319 Sum_probs=49.0
Q ss_pred eEEeeCCeEEEEEEeeccC--CCccEEEecC-cEEe------eC-----------CCceeEEecCCceeEEEEEEEeecC
Q psy16426 65 VGAMEGDQMTLECHSEAYP--KSINYWTKEN-GEII------AQ-----------GSKYEPILLDNAYKIHMKLTIKAVT 124 (194)
Q Consensus 65 ~~~~~g~~~~l~C~~~~~p--~p~v~W~~~~-~~~~------~~-----------~~~~~~~~~~~~~~~~~~L~i~~~~ 124 (194)
..+.+|+.+.|.|.+.+.+ .+.+.|++++ +... .. ..++....... ....+|.|.+++
T Consensus 144 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~~~~~L~I~~v~ 221 (256)
T 3ux9_B 144 GLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNS--KNTLYLQMNSLR 221 (256)
T ss_dssp EEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETT--TTEEEEEECSCC
T ss_pred eEEcCCCeEEEEEEEeCCcccccEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCC--CCEEEEEECCCC
Confidence 3467899999999998876 6789999842 2111 00 11222111111 124579999999
Q ss_pred CCCCeEEEEEEEcCC
Q psy16426 125 KQDFGAYKCVSKNSL 139 (194)
Q Consensus 125 ~~d~g~y~C~a~n~~ 139 (194)
.+|.|.|+|.+.|..
T Consensus 222 ~~DsG~Y~C~~~~~~ 236 (256)
T 3ux9_B 222 AEDTAVYYCARYIDF 236 (256)
T ss_dssp GGGCEEEEEEEEETT
T ss_pred hhhCEEEEEEEEcCC
Confidence 999999999999863
No 222
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.38 E-value=2.1e-11 Score=89.58 Aligned_cols=130 Identities=13% Similarity=0.165 Sum_probs=83.9
Q ss_pred CCeEEEcCCe-eeeeCCCcEEEEeeeeccCCc--eeEEEecCceE-----------E-----------------------
Q psy16426 9 PPMIWIQNQL-VGAMEGDQMTLECHSEAYPKS--INYWTKENGEI-----------I----------------------- 51 (194)
Q Consensus 9 ~P~~~~~~~~-~~v~~G~~v~L~C~~~g~p~~--~v~W~k~~~~l-----------~----------------------- 51 (194)
.|....++.. +.+.+|++++|.|.+ +.|.| .|.|++.+..+ +
T Consensus 6 ~~~~V~pp~~~v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~ 84 (210)
T 1gsm_A 6 KPLQVEPPEPVVAVALGASRQLTCRL-ACADRGASVQWRGLDTSLGAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRT 84 (210)
T ss_dssp CSEEEESCCSEEEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTTCCEEEESSEEEEEECSCCGGGCEEEEEEEEETTEE
T ss_pred CCEEEeCCCCceEEeCCCCEEEEEEC-CCCCCCcceEEeecccccCcEEecCCccEEEECccCcccCceEEEEEEeCCCc
Confidence 3444444443 689999999999999 88877 99999864211 0
Q ss_pred --------EeeCCeEEe-ccceeEEeeCCeEEEEEEeecc-CC----CccEEEecCcEEeeCCCce-e-EE---------
Q psy16426 52 --------AQVPPMIWI-QNQLVGAMEGDQMTLECHSEAY-PK----SINYWTKENGEIIAQGSKY-E-PI--------- 106 (194)
Q Consensus 52 --------v~~~p~i~~-~~~~~~~~~g~~~~l~C~~~~~-p~----p~v~W~~~~~~~~~~~~~~-~-~~--------- 106 (194)
|+.+|.... .+. ....|+.. |.|.+.+. |. +++.|++ |+..+... .+ . ..
T Consensus 85 ~~~~~~ltV~~~P~~~~i~~~--~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk-~~~~L~~~-~~~~~~~~~~~~~~~~ 159 (210)
T 1gsm_A 85 FQHTVQLLVYAFPNQLTVSPA--ALVPGDPE-VACTAHKVTPVDPNALSFSLLV-GGQELEGA-QALGPEVQEEEEEPQG 159 (210)
T ss_dssp EEEEEEEEEEBCCSEEEEESS--SBCTTCCE-EEEEEEEEBCCCTTTEEEEEEE-TTEECTTC-EECCCEEEECTTCCSS
T ss_pred eEEEEEEEEEecCCCcEEccc--eEEeCCce-EEEEeCCCCCCCCCCcEEEEEE-CCEEcccc-cccccceecccccccC
Confidence 455553322 221 34567888 99999986 53 3788999 55554322 11 1 01
Q ss_pred ecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEE
Q psy16426 107 LLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDG 144 (194)
Q Consensus 107 ~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~ 144 (194)
..+..+...++|.+.....+|.++|+|.|.+..-....
T Consensus 160 ~~~~~~~vts~~~~~~~~~D~~~~~tC~a~~~L~~~~~ 197 (210)
T 1gsm_A 160 DEDVLFRVTERWRLPPLGTPVPPALYCQATMRLPGLEL 197 (210)
T ss_dssp CCCCCEEEEEEEECCCCCSSCCSEEEEEEEEEETTEEE
T ss_pred CcceEEEEEEEEeecCCcccCCceEEEEEEeeCCCCcc
Confidence 11224566677887777777778999999987654443
No 223
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.38 E-value=2.7e-12 Score=85.85 Aligned_cols=98 Identities=13% Similarity=0.100 Sum_probs=70.0
Q ss_pred CeEEeccceeEEeeCCeEEEEEEeecc---CCCccEEEecCcEEeeC--CCceeE--EecCCceeEEEEEEEeecCCCCC
Q psy16426 56 PMIWIQNQLVGAMEGDQMTLECHSEAY---PKSINYWTKENGEIIAQ--GSKYEP--ILLDNAYKIHMKLTIKAVTKQDF 128 (194)
Q Consensus 56 p~i~~~~~~~~~~~g~~~~l~C~~~~~---p~p~v~W~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~L~i~~~~~~d~ 128 (194)
+.+...+..+.+.+|+++.|.|.+.+. |.|.+.||++....... ..++.. ..........++|.|.++...|.
T Consensus 13 ~~f~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 92 (118)
T 2edn_A 13 GVFLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGDR 92 (118)
T ss_dssp SSCSBCCCCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTTC
T ss_pred ceEEECCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChhhC
Confidence 344455677889999999999999874 78999999932111111 122221 11111112357999999999999
Q ss_pred eEEEEEEEcCCCceEEEEEEEcccC
Q psy16426 129 GAYKCVSKNSLGDTDGSIKLYGKKK 153 (194)
Q Consensus 129 g~y~C~a~n~~g~~~~~~~l~v~~~ 153 (194)
|.|+|.+.|..|...+.+.|.|..+
T Consensus 93 G~Y~Cevsn~~g~~s~~~~L~V~~~ 117 (118)
T 2edn_A 93 GYYRLEVKAKDTCDSCGFNIDVEAP 117 (118)
T ss_dssp SCEEEEEECSSCEEEEEECCEEECC
T ss_pred EEEEEEEEEcCCcEEEEEEEEEEcC
Confidence 9999999999999999998888653
No 224
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.37 E-value=1.3e-12 Score=83.88 Aligned_cols=86 Identities=15% Similarity=0.297 Sum_probs=66.9
Q ss_pred CCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEE
Q psy16426 55 PPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCV 134 (194)
Q Consensus 55 ~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~ 134 (194)
+|.+...+....+.+|+.+.|.|.+.+.| |.+.|++ ++..+....++. .. ...|.|.++..+|.|.|+|.
T Consensus 9 pp~~~~~~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k-~g~~~~~~~~~~--~~------~~~L~i~~~~~~D~G~Y~C~ 78 (95)
T 2ckn_A 9 PWGVPVEVESLLVHPGDLLQLRCRLRDDV-QSINWLR-DGVQLVESNRTR--IT------GEEVEVRDSIPADSGLYACV 78 (95)
T ss_dssp SCCBTTBBCCEEECTTSCEEEECCEESSC-CEEEEEB-TTBCCCCCSSEE--EC------SSEEEESSCCGGGSEEEEEE
T ss_pred CCEEEcCcceEEEcCCCeEEEEEECCCCC-CceEEEE-CCEecCCCCCEE--Ee------CCEEEECCCChHHCEEEEEE
Confidence 44555555667788999999999999987 7999999 555444443332 11 23899999999999999999
Q ss_pred EEcCCCceEEEEEEEc
Q psy16426 135 SKNSLGDTDGSIKLYG 150 (194)
Q Consensus 135 a~n~~g~~~~~~~l~v 150 (194)
+.|..|.....+.|.|
T Consensus 79 a~n~~g~~~~~~~l~V 94 (95)
T 2ckn_A 79 TSSPSGSDTTYFSVNV 94 (95)
T ss_dssp EEETTEEEEEEEEEEE
T ss_pred eccCCCcEEEEEEEEE
Confidence 9999999888887765
No 225
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.37 E-value=7.3e-12 Score=83.88 Aligned_cols=93 Identities=18% Similarity=0.189 Sum_probs=66.4
Q ss_pred ceeEEeeCCeEEEEEEeeccC--CCccEEEecCcEEee----CCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEE
Q psy16426 63 QLVGAMEGDQMTLECHSEAYP--KSINYWTKENGEIIA----QGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSK 136 (194)
Q Consensus 63 ~~~~~~~g~~~~l~C~~~~~p--~p~v~W~~~~~~~~~----~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~ 136 (194)
..+.+.+|+.+.|.|.+.+.| .+.+.|++++..... ...... ..........++|.|.+++.+|.|.|+|.|.
T Consensus 16 ~~v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 94 (122)
T 3s35_X 16 HGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKT-QSGSEMKKFLSTLTIDGVTRSDQGLYTCAAS 94 (122)
T ss_dssp SCEEEEETCCEEEEEEEEECTTCCCEEEEECSCTTCCHHHHBCCSCCE-EEETTEEEEEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCEEEecCCeEEEEEEEEcCCCCcEEEEEECCCcccCCceeeeecccc-ccCCceeeEEEEEEECCCCcccCEEEEEEEc
Confidence 445788999999999999854 467889985442210 111110 1111112345689999999999999999999
Q ss_pred cCCCceEEEEEEEcccCCCC
Q psy16426 137 NSLGDTDGSIKLYGKKKKKK 156 (194)
Q Consensus 137 n~~g~~~~~~~l~v~~~p~~ 156 (194)
|..|...+.+.|.|.+.|..
T Consensus 95 n~~g~~~~~~~l~V~~~p~i 114 (122)
T 3s35_X 95 SGLMTKKNSTFVRVHEKPFV 114 (122)
T ss_dssp CSSCEEEEEEEEEEEEEECC
T ss_pred cCCCceEEEEEEEEeccCeE
Confidence 99999999999998877654
No 226
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.37 E-value=4.3e-13 Score=86.76 Aligned_cols=83 Identities=23% Similarity=0.418 Sum_probs=62.7
Q ss_pred ceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCcee-EEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCc
Q psy16426 63 QLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYE-PILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGD 141 (194)
Q Consensus 63 ~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~-~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~ 141 (194)
..+.+.+|+.+.|.|.+.+.|.|.+.|++ ++.......... ...... .++|.|.++..+|.|.|+|.+.|..|.
T Consensus 16 ~~~~v~~G~~v~l~C~~~g~p~p~v~W~~-~~~~~~~~~~~~~~~~~~~----~~~L~i~~v~~~D~G~Y~C~a~N~~g~ 90 (100)
T 3caf_A 16 RLHAVPAANTVKFRCPAGGNPMPTMRWLK-NGKEFKQEHRIGGYKVRNQ----HWSLIMESVVPSDKGNYTCVVENEYGS 90 (100)
T ss_dssp CEEEECTTCCEEEECCEEEESCCEEEEEE-TTEECCGGGSTTCCEEEGG----GTEEEECSCCGGGCEEEEEEEEETTEE
T ss_pred cEEEecCCCEEEEEEEccccCCCEEEEEE-CCEEcccccccccEEEecC----eEEEEEccCCcCCCEEEEEEEEeCCCE
Confidence 45667889999999999999999999999 554443222111 011111 238999999999999999999999999
Q ss_pred eEEEEEEEc
Q psy16426 142 TDGSIKLYG 150 (194)
Q Consensus 142 ~~~~~~l~v 150 (194)
....+.|.|
T Consensus 91 ~~~~~~l~V 99 (100)
T 3caf_A 91 INHTYHLDV 99 (100)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEE
Confidence 888888766
No 227
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.37 E-value=1.5e-12 Score=105.49 Aligned_cols=134 Identities=19% Similarity=0.282 Sum_probs=83.4
Q ss_pred ccCCeEEEcC-Ceee-eeCCCcEEEEeeeeccC----CceeEEEecCceE---------------------E--------
Q psy16426 7 NVPPMIWIQN-QLVG-AMEGDQMTLECHSEAYP----KSINYWTKENGEI---------------------I-------- 51 (194)
Q Consensus 7 ~~~P~~~~~~-~~~~-v~~G~~v~L~C~~~g~p----~~~v~W~k~~~~l---------------------~-------- 51 (194)
..+|.+...+ .... +.+|++++|.|.+.|.+ .+.|.|++++..+ +
T Consensus 236 ~~~p~v~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 315 (444)
T 1igt_B 236 LGGPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWM 315 (444)
T ss_dssp CCCCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHH
T ss_pred CCCceEEecCCchhheeecCCCcEEEEEEeecccCCCCeEEEEEECCccccCcccccceeCCCCcEEEEEEEEEcHHHhc
Confidence 3477764444 3333 58899999999999874 3689999987442 0
Q ss_pred ---------------------E------eeCCeEEeccceeEEeeCCeEEEEEEeecc-CCC-ccEEEecCcEEeeCCCc
Q psy16426 52 ---------------------A------QVPPMIWIQNQLVGAMEGDQMTLECHSEAY-PKS-INYWTKENGEIIAQGSK 102 (194)
Q Consensus 52 ---------------------v------~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~-p~p-~v~W~~~~~~~~~~~~~ 102 (194)
+ ..+|.+...........+..+.|.|.+.|. |.+ .+.|++ ++..+.....
T Consensus 316 d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k-~g~~l~~~~~ 394 (444)
T 1igt_B 316 SGKEFKCKVNNKDLPAPIERTISKPKGSVRAPQVYVLPPPEEEMTKKQVTLTCMVTDFMPEDIYVEWTN-NGKTELNYKN 394 (444)
T ss_dssp TTCEEEEEEECTTCSSCEEEEEECCCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEE-TTEECSSEEE
T ss_pred cCCcEEEEEEcCCCCCceEEEEeccCCCCCCCEEEEeCCChHHccCCeEEEEEEEEeeeCCCCEEEEEE-CCEEcccccc
Confidence 1 123333322211111234459999999984 544 789999 4544322111
Q ss_pred eeE-EecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCc
Q psy16426 103 YEP-ILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGD 141 (194)
Q Consensus 103 ~~~-~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~ 141 (194)
... ...++.+...+.|.|.....+|.|.|+|.|.|....
T Consensus 395 ~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~a~n~~l~ 434 (444)
T 1igt_B 395 TEPVLDSDGSYFMYSKLRVEKKNWVERNSYSCSVVHEGLH 434 (444)
T ss_dssp CCCEECTTSCEEEEEEEEEEHHHHHTCCCEEEEEECTTSG
T ss_pred ccceeCCCCCEEEEEEEEEChHHhcCCCeEEEEEECCCcC
Confidence 111 123444556677888888777899999999997643
No 228
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.37 E-value=3.4e-11 Score=88.95 Aligned_cols=79 Identities=13% Similarity=0.303 Sum_probs=52.7
Q ss_pred eeCCeEEEEEEeecc-CCC-ccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCC--CCCeEEEEEEEcCCCceE
Q psy16426 68 MEGDQMTLECHSEAY-PKS-INYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTK--QDFGAYKCVSKNSLGDTD 143 (194)
Q Consensus 68 ~~g~~~~l~C~~~~~-p~p-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~--~d~g~y~C~a~n~~g~~~ 143 (194)
..|+.+.|.|.+.+. |.| .++|++.++..+.....+.....++.|...+.|.|..... +|.|.|+|.+.|..+...
T Consensus 139 ~~g~~v~L~C~~~g~~P~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~~ 218 (223)
T 1dee_B 139 NPSSTVAVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGNKE 218 (223)
T ss_dssp CSSSEEEEEEEEEEEBSSCCEEEEEETTSCBCSCEEECCCEEETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCCEE
T ss_pred CCCCcEEEEEEEEEEeCCCeEEEeEccCCCccceeEECCccccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCCCc
Confidence 367899999999887 666 8999983333322210000111234455567888887765 788999999999988766
Q ss_pred EEE
Q psy16426 144 GSI 146 (194)
Q Consensus 144 ~~~ 146 (194)
..+
T Consensus 219 ~~~ 221 (223)
T 1dee_B 219 KDV 221 (223)
T ss_dssp EEE
T ss_pred ccc
Confidence 543
No 229
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.37 E-value=4.8e-12 Score=80.49 Aligned_cols=84 Identities=18% Similarity=0.271 Sum_probs=65.6
Q ss_pred CCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEE
Q psy16426 55 PPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCV 134 (194)
Q Consensus 55 ~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~ 134 (194)
++.+...+....+.+|+.+.|.|.+.+.|.|.+.|++ ++....... ...|.|.++..+|.|.|+|.
T Consensus 3 ~~~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~-~~~~~~~~~-------------~~~L~i~~v~~~d~G~Y~C~ 68 (91)
T 3bfo_A 3 KLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFK-NELPLTHET-------------KKLYMVPYVDLEHQGTYWCH 68 (91)
T ss_dssp CCEEEECCCCEEECTTSCEEEECEEECSSCCEEEEEE-TTEECTTCC-------------SSEEEESSCCGGGCEEEEEE
T ss_pred ceEEEECCCccEecCCCcEEEEEEeccCCCCEEEEEc-CCeeCCcCC-------------CCeEEECCCCHHhCEEEEEE
Confidence 4556667777778999999999999999999999999 554433221 13899999999999999999
Q ss_pred EEcCCCceE-EEEEEEccc
Q psy16426 135 SKNSLGDTD-GSIKLYGKK 152 (194)
Q Consensus 135 a~n~~g~~~-~~~~l~v~~ 152 (194)
+.|..|... ..+.|.|.+
T Consensus 69 a~n~~g~~~s~~~~l~V~~ 87 (91)
T 3bfo_A 69 VYNDRDSQDSKKVEIIIDE 87 (91)
T ss_dssp EECSSCEEECCCEEEEEC-
T ss_pred EEcCCCCEEeeeEEEEEeh
Confidence 999998755 446666644
No 230
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.36 E-value=2.1e-11 Score=78.81 Aligned_cols=91 Identities=20% Similarity=0.168 Sum_probs=67.1
Q ss_pred CCeEEeccce-eEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEE
Q psy16426 55 PPMIWIQNQL-VGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKC 133 (194)
Q Consensus 55 ~p~i~~~~~~-~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C 133 (194)
+|.+...... ..+.+|+.+.|.|.+. .|.+.+.|++ ++..+....++....... ...|.|.++..+|.|.|+|
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k-~g~~i~~~~~~~~~~~~~----~~~L~I~~~~~~D~G~Y~C 80 (100)
T 2yuv_A 7 GAAFAKILDPAYQVDKGGRVRFVVELA-DPKLEVKWYK-NGQEIRPSTKYIFEHKGC----QRILFINNCQMTDDSEYYV 80 (100)
T ss_dssp SCCEEECCCSCEEECTTEEEEEEEEES-CTTSCEEEEE-SSCBCCCBTTEEEEEETT----EEEEEEEEECTTTCCEEEE
T ss_pred CCeEEecCCCccEEcCCCcEEEEEEec-CCCceEEEEE-CCEECCCCCCEEEEecCC----EEEEEEcCCCcCcCEEEEE
Confidence 5666655544 5677999999999998 6889999999 554444444444322222 3489999999999999999
Q ss_pred EEEcCCCceEEEEEEEcccCCC
Q psy16426 134 VSKNSLGDTDGSIKLYGKKKKK 155 (194)
Q Consensus 134 ~a~n~~g~~~~~~~l~v~~~p~ 155 (194)
.+ |.......|.|..+|.
T Consensus 81 ~a----g~~~~~~~l~V~~~P~ 98 (100)
T 2yuv_A 81 TA----GDEKCSTELFVRSGPS 98 (100)
T ss_dssp EE----TTEEEEEEEEECCSCC
T ss_pred EE----CCceEEEEEEEecCCC
Confidence 99 6677788888887664
No 231
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.36 E-value=1.2e-11 Score=92.06 Aligned_cols=72 Identities=17% Similarity=0.297 Sum_probs=49.7
Q ss_pred eCCeEEEEEEeec-cCCC-ccEEEecCcEEeeCCCcee---EEecCCceeEEEEEEEeecCCCC-CeEEEEEEEcCCCc
Q psy16426 69 EGDQMTLECHSEA-YPKS-INYWTKENGEIIAQGSKYE---PILLDNAYKIHMKLTIKAVTKQD-FGAYKCVSKNSLGD 141 (194)
Q Consensus 69 ~g~~~~l~C~~~~-~p~p-~v~W~~~~~~~~~~~~~~~---~~~~~~~~~~~~~L~i~~~~~~d-~g~y~C~a~n~~g~ 141 (194)
.|+.+.|.|.+.+ .|.+ .+.|++ ++..+....... ....++.+...+.|.|......| .|.|+|.+.|....
T Consensus 136 ~g~~v~L~C~~~g~~P~~~~v~W~~-~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~~~ 213 (240)
T 3q5y_A 136 NKQKATLVCLARGFFPDHVELSWWV-NGKEVHSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHGLS 213 (240)
T ss_dssp HHSEEEEEEEEEEEBSSCEEEEEEE-TTEEECTTEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred cCCceEEEEEEeeEECCCeEEEEEE-CCEECcCcEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCC
Confidence 4789999999988 4545 678999 565554332111 12234445566789999988888 67999999987644
No 232
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.36 E-value=1.1e-11 Score=90.80 Aligned_cols=99 Identities=21% Similarity=0.404 Sum_probs=76.9
Q ss_pred eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCC--CceeEEecCCceeEEEEEEEeecCCCCCeEE
Q psy16426 54 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQG--SKYEPILLDNAYKIHMKLTIKAVTKQDFGAY 131 (194)
Q Consensus 54 ~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~--~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y 131 (194)
++|.|. .+..+.+..|+.+.|.|.+.+.|.|.+.|++ ++..+... .++....... .+.|.|.++..+|.|.|
T Consensus 18 ~~P~~~-~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~-~g~~l~~~~~~~~~~~~~~~----~~~L~i~~~~~~d~G~Y 91 (215)
T 3mtr_A 18 YAPKLQ-GPVAVYTWEGNQVNITCEVFAYPSATISWFR-DGQLLPSSNYSNIKIYNTPS----ASYLEVTPDSENDFGNY 91 (215)
T ss_dssp EEEEEE-CCSEEEECTTCCEEEEEEEEEESCCEEEEEE-TTEESSCSSSCSEEEEEETT----EEEEEECCCSGGGCEEE
T ss_pred cCCccc-CCceEEEECCCCEEEEEEEeecCCCEEEEEE-CCeECCCCCCccEEEecCCC----eeEEEEecCChhhCeEE
Confidence 466664 5556778899999999999999999999999 55554433 2222221111 46999999999999999
Q ss_pred EEEEEcCCCceEEEEEEEcccCCCCCh
Q psy16426 132 KCVSKNSLGDTDGSIKLYGKKKKKKKK 158 (194)
Q Consensus 132 ~C~a~n~~g~~~~~~~l~v~~~p~~p~ 158 (194)
+|.+.|..|.....+.|.+...|..|.
T Consensus 92 ~C~a~n~~g~~~~~~~l~v~~~P~~p~ 118 (215)
T 3mtr_A 92 NCTAVNRIGQESLEFILVQADTPSSPS 118 (215)
T ss_dssp EEEEECSSCEEEEEEEEEECCCCCCCE
T ss_pred EEEEEECCCceEEEEEEEECCCCCCCc
Confidence 999999999999899999888777664
No 233
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.36 E-value=1.9e-12 Score=105.31 Aligned_cols=134 Identities=15% Similarity=0.211 Sum_probs=83.4
Q ss_pred cCCeE-EEcCCeee-eeCCCcEEEEeeeeccCCc----eeEEEecCceEE------------------------------
Q psy16426 8 VPPMI-WIQNQLVG-AMEGDQMTLECHSEAYPKS----INYWTKENGEII------------------------------ 51 (194)
Q Consensus 8 ~~P~~-~~~~~~~~-v~~G~~v~L~C~~~g~p~~----~v~W~k~~~~l~------------------------------ 51 (194)
.+|.+ ...+.... +.+|++++|.|.+.|.+++ .|.|++++..+.
T Consensus 246 ~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d 325 (457)
T 1hzh_H 246 GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLN 325 (457)
T ss_dssp SSCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEECCCEEEEEEECTTSCEEEEEEECCCHHHHHH
T ss_pred CCceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEeCCccccccccccceecCCCcEEEEEEEEECHHHccC
Confidence 36776 44443333 6789999999999997543 899999875431
Q ss_pred --------------------E------eeCCeEEeccceeEEeeCCeEEEEEEeeccCCC--ccEEEecCcEEeeCCCce
Q psy16426 52 --------------------A------QVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKS--INYWTKENGEIIAQGSKY 103 (194)
Q Consensus 52 --------------------v------~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p--~v~W~~~~~~~~~~~~~~ 103 (194)
+ ..+|.+...........+..+.|.|.+.|.+++ .+.|++ ++..+......
T Consensus 326 ~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~l~C~~~g~~p~~~~v~W~k-~g~~l~~~~~~ 404 (457)
T 1hzh_H 326 GKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWES-NGQPENNYKTT 404 (457)
T ss_dssp TCCEEEEEECTTSSSCEEEEECCCCCCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEE-TTEECCCEEEC
T ss_pred CCcEEEEEeCCCCCCcceEEEEcccCCCCCCeEEEECCCccccCCCcEEEEEEEEeEECCCCEEEEEE-CCEECcceeec
Confidence 0 112333222111111234459999999987554 788999 55544322111
Q ss_pred eE-EecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCce
Q psy16426 104 EP-ILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDT 142 (194)
Q Consensus 104 ~~-~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~ 142 (194)
.. ...++.+...+.|.|.....+|.|.|+|.|.|.....
T Consensus 405 ~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~~ 444 (457)
T 1hzh_H 405 PPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHN 444 (457)
T ss_dssp CCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSGG
T ss_pred CceeCCCCCEEEEEEEEEChHHccCCCeEEEEEEECCCCC
Confidence 11 2234445556678888776678999999999986543
No 234
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.36 E-value=1.4e-11 Score=90.82 Aligned_cols=75 Identities=19% Similarity=0.336 Sum_probs=51.9
Q ss_pred eeCCeEEEEEEeecc-CC--CccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceE
Q psy16426 68 MEGDQMTLECHSEAY-PK--SINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTD 143 (194)
Q Consensus 68 ~~g~~~~l~C~~~~~-p~--p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~ 143 (194)
..|+.+.|.|.+.+. |. +.+.|++++..+...... .....++.+...+.|.|......|.|.|+|.+.|..+...
T Consensus 135 ~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~~~~~~~~~-~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 135 LSSDPVIIGCLIHDYFPSGTMNVTWGKSGKDITTVNFP-PALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp SCCSSEEEEEEEEEEBSCCCEEEEESCCCSSCEEEECC-CEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSCCE
T ss_pred cCCCcEEEEEEEEeEECCCcEEEEEecCCEecceEecC-ceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCceE
Confidence 468889999999887 55 689999844332110000 1112334455566899998888899999999999987654
No 235
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.36 E-value=6.7e-12 Score=84.58 Aligned_cols=92 Identities=25% Similarity=0.383 Sum_probs=67.2
Q ss_pred ccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEee-------CCCceeEEecCCceeEEEEEEEeecCCCCCeEEEE
Q psy16426 61 QNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIA-------QGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKC 133 (194)
Q Consensus 61 ~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C 133 (194)
.+..+.+.+|+++.|.|.+.+.|.+.+.|+.+++.+.. ...++...... ....+|.|.+++.+|.|.|+|
T Consensus 7 ~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~~L~I~~v~~~DsG~Y~C 83 (124)
T 3rbg_A 7 HTETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHHS---ANQLSITVPNVTLQDEGVYKC 83 (124)
T ss_dssp SEEEEEEETTSCEEEEEECCCCTTCEEEEECTTSCEEEETTEECSCSSCCEEEEEE---TTEEEEEESSCCGGGCEEEEE
T ss_pred CCccEEEcCCCCEEEEeEEeccCCCEEEEECCCCeEEEEeccccccCCcEEEEeCC---CCEEEEEECCCChHHCEEEEE
Confidence 44567788999999999999989999999975554332 22222221111 114699999999999999999
Q ss_pred EEEcCCCceEEEEEEEcccCCCC
Q psy16426 134 VSKNSLGDTDGSIKLYGKKKKKK 156 (194)
Q Consensus 134 ~a~n~~g~~~~~~~l~v~~~p~~ 156 (194)
.+.|. |.....+.|.|...|..
T Consensus 84 ~a~n~-g~~~~~~~l~V~~~P~~ 105 (124)
T 3rbg_A 84 LHYSD-SVSTKEVKVIVLATMKG 105 (124)
T ss_dssp EEESS-SEEEEEEEEEEECC---
T ss_pred EEEcC-CCCcEEEEEEEEeCCCC
Confidence 99999 88888888888776653
No 236
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.35 E-value=6.1e-12 Score=79.15 Aligned_cols=80 Identities=19% Similarity=0.291 Sum_probs=60.0
Q ss_pred ceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCce
Q psy16426 63 QLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDT 142 (194)
Q Consensus 63 ~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~ 142 (194)
..+.+.+|+.+.|.|.+.+ |.|.+.|++ ++..+....++.....+. ..+|.|.++..+|.|.|+|.|.|.
T Consensus 4 t~v~~~~G~~v~l~C~vs~-p~p~v~W~k-~g~~l~~~~~~~~~~~~~----~~~L~I~~~~~~D~G~Y~C~a~n~---- 73 (84)
T 2lu7_A 4 TRVRSTPGGDLELVVHLSG-PGGPVRWYK-DGERLASQGRVQLEQAGA----RQVLRVQGARSGDAGEYLCDAPQD---- 73 (84)
T ss_dssp CCEEECTTSCEEEECCCSC-CSTTCEEEE-TTEECCCCSSEEEEECSS----CEEEEESSCSSTTCEEEEEECTTT----
T ss_pred eEEEEecCCCEEEEEEECC-CCcEEEEEE-CCEEccccccEEEeecCC----eEEEEecCCCCcccEEEEEEECCE----
Confidence 3566789999999999865 888999999 666666666665333322 358999999999999999998654
Q ss_pred EEEEEEEccc
Q psy16426 143 DGSIKLYGKK 152 (194)
Q Consensus 143 ~~~~~l~v~~ 152 (194)
..+..|.|.+
T Consensus 74 ~~~a~l~V~e 83 (84)
T 2lu7_A 74 SRIFLVSVEE 83 (84)
T ss_dssp CEEEEEEECC
T ss_pred EEEEEEEEEC
Confidence 4455666643
No 237
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.35 E-value=3.6e-12 Score=100.11 Aligned_cols=75 Identities=15% Similarity=0.281 Sum_probs=50.3
Q ss_pred EeeCCeEEEEEEeecc-CC-CccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceE
Q psy16426 67 AMEGDQMTLECHSEAY-PK-SINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTD 143 (194)
Q Consensus 67 ~~~g~~~~l~C~~~~~-p~-p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~ 143 (194)
+.+|+.+.|.|.+.+. |. +.+.|++ ++..............++.+...+.|.|.++..+| |.|+|.+.|..+...
T Consensus 132 ~~~g~~v~L~C~~~g~~P~~~~v~W~k-~g~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~ 208 (344)
T 1za6_B 132 STSGGTAALGCLVKDYFPEPVTVSWNS-GALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK 208 (344)
T ss_dssp TTSSSEEEEEEEEEEEBSSCCCEEETT-TTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGTEE
T ss_pred ccCCCcEEEEEEEeeEECCCeEEEEec-CCccCceeECCCeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCcc
Confidence 3578999999999987 54 6899998 44321100000011233444556689998888777 999999999887654
No 238
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.35 E-value=4.5e-12 Score=97.62 Aligned_cols=83 Identities=14% Similarity=0.130 Sum_probs=56.8
Q ss_pred EeeCCeEEEEEEe-eccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceE--
Q psy16426 67 AMEGDQMTLECHS-EAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTD-- 143 (194)
Q Consensus 67 ~~~g~~~~l~C~~-~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~-- 143 (194)
...|+.+.|.|.+ .+.|.+.+.|++++..+... .....+......+.|.|..+...|.|.|+|.+.|..+...
T Consensus 126 ~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~----~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 201 (308)
T 4fom_A 126 DGGNETVAAICIAATGKPVAHIDWEGDLGEMEST----TTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIR 201 (308)
T ss_dssp TTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEE----EEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEE
T ss_pred EcCCceEEEEEEecCCcCCceEEEEECCcccccc----cceeeeecccccccceEEeeeecCCccEEEEEEccCCCCceE
Confidence 3457889999975 67889999999854433211 1122333344566899999999999999999999876654
Q ss_pred EEEEEEcccC
Q psy16426 144 GSIKLYGKKK 153 (194)
Q Consensus 144 ~~~~l~v~~~ 153 (194)
..+.|.|...
T Consensus 202 ~~~~l~V~~~ 211 (308)
T 4fom_A 202 YSFILDIQYA 211 (308)
T ss_dssp EEEECCCCEE
T ss_pred EeEEEEEecC
Confidence 4455555433
No 239
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.35 E-value=2e-11 Score=92.64 Aligned_cols=41 Identities=15% Similarity=0.201 Sum_probs=34.4
Q ss_pred cccCCeEEEcCCeeeeeCCCcEEEEeeeeccC-----CceeEEEec
Q psy16426 6 QNVPPMIWIQNQLVGAMEGDQMTLECHSEAYP-----KSINYWTKE 46 (194)
Q Consensus 6 v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p-----~~~v~W~k~ 46 (194)
....+.+...+.++.+.+|++++|.|.+.+.+ .+.+.||+.
T Consensus 12 ~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~ 57 (268)
T 1x9q_A 12 KASDVVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQ 57 (268)
T ss_dssp --CCCCEEEECSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEE
T ss_pred ccccceEEeeCCeEEecCCCCEEEEeEecCCcccccCCceEEEEEE
Confidence 45678888888889999999999999998876 479999985
No 240
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.35 E-value=1.5e-11 Score=105.69 Aligned_cols=138 Identities=15% Similarity=0.162 Sum_probs=91.5
Q ss_pred CCeeeeeCC--CcEEEEeeeeccCCceeEEEec--CceEE----------------------------------------
Q psy16426 16 NQLVGAMEG--DQMTLECHSEAYPKSINYWTKE--NGEII---------------------------------------- 51 (194)
Q Consensus 16 ~~~~~v~~G--~~v~L~C~~~g~p~~~v~W~k~--~~~l~---------------------------------------- 51 (194)
+..+.+.+| ++++|.|.+.+ |.+.+.|+++ +..+.
T Consensus 133 ~~~~~v~~G~~~~v~L~C~~~~-p~~~v~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s 211 (772)
T 3v2a_R 133 HGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISWDSKKGFTIPSYMISYAGMVFCEAKINDESYQS 211 (772)
T ss_dssp EEEEEEESSCCCEEEECCCCSC-SSCCEEEEEETTTEEECCCSSSCEEETTTEEEEEGGGTTTCSEEEEEEEETTEEEEC
T ss_pred ceeEEEecCCCCeEEEEccCCC-CCcEEEEEecCCCccccCCCceeecCCCCCeEecCCChhhCeEEEEEEEECCceEEE
Confidence 355678889 88999999987 7789999997 44332
Q ss_pred ------EeeC--CeEEecc-ceeEEeeCCeEEEEEEeecc--CCCccEEEecCcEEeeCCCceeEEec----CCceeEEE
Q psy16426 52 ------AQVP--PMIWIQN-QLVGAMEGDQMTLECHSEAY--PKSINYWTKENGEIIAQGSKYEPILL----DNAYKIHM 116 (194)
Q Consensus 52 ------v~~~--p~i~~~~-~~~~~~~g~~~~l~C~~~~~--p~p~v~W~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 116 (194)
+... +.+...+ ....+.+|+.+.|.|.+.+. +.+.+.|++++... ........... .......+
T Consensus 212 ~~~~~~v~~~~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 290 (772)
T 3v2a_R 212 IMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKH-QHKKLVNRDLKTQSGSEMKKFLS 290 (772)
T ss_dssp CEEEEEEECCCEEEEEEECCSCEEEETTCCEEEEEEEEECTTCCCEEEEECC---------CEEEEC-----CCCEEEEE
T ss_pred EEEEEEEecCccceeeeCCCCceEEecCCcEEEEEEEecCCCCceeEEEecCCccC-CCceeeeccccccccccceEEEE
Confidence 1111 1122222 23567889999999999874 45578899844332 22111110000 02233467
Q ss_pred EEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEcccCCC
Q psy16426 117 KLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGKKKKK 155 (194)
Q Consensus 117 ~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~p~ 155 (194)
.|.|.++..+|.|.|+|.+.|..+.....+.|.|...|.
T Consensus 291 ~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~ 329 (772)
T 3v2a_R 291 TLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKPF 329 (772)
T ss_dssp EEEESSCCSTTCSEEEEEEECSSCEEEEEEEEEEECCCC
T ss_pred EEEECcCCcCCCeEEEEEEEcCCcceeEEEEEEEeCCCe
Confidence 999999999999999999999998888888888877654
No 241
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.33 E-value=3.7e-12 Score=95.70 Aligned_cols=132 Identities=14% Similarity=0.197 Sum_probs=82.5
Q ss_pred cCCeEEEc-CCeee-eeCCCcEEEEeeeeccC----CceeEEEecCceEE------------------------------
Q psy16426 8 VPPMIWIQ-NQLVG-AMEGDQMTLECHSEAYP----KSINYWTKENGEII------------------------------ 51 (194)
Q Consensus 8 ~~P~~~~~-~~~~~-v~~G~~v~L~C~~~g~p----~~~v~W~k~~~~l~------------------------------ 51 (194)
.+|.+.+. +.... +..|++++|.|.+.|.. ...|+|++++..+.
T Consensus 21 ~~P~v~i~~ps~~~~l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d 100 (240)
T 4acp_A 21 GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLN 100 (240)
T ss_dssp --CEEEEECCCHHHHHSSSSCCEEEEEEESCCC--CCCEEEEEETTEEECCCEECCCEEC---CEEEEEEEECCHHHHHH
T ss_pred CCCEEEEECcChHHhcccCCCcEEEEEEeccccCCCccEEEEEECCcccCCceeccceECCCCeEEEEEEEEEechhccC
Confidence 34555444 45555 56799999999999964 34799999886641
Q ss_pred -------E-------------------eeCCeEEeccceeEEeeCCeEEEEEEeeccCCC--ccEEEecCcEEeeCCCce
Q psy16426 52 -------A-------------------QVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKS--INYWTKENGEIIAQGSKY 103 (194)
Q Consensus 52 -------v-------------------~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p--~v~W~~~~~~~~~~~~~~ 103 (194)
+ ..+|.+.+.........|..+.|.|.+.++.++ .+.|++ ++.........
T Consensus 101 ~~~YtC~v~h~~~~~~~~~~i~~~~~~~~~P~V~v~~~~~~~~~g~~~~L~C~~~gf~P~~i~v~W~k-~g~~~~~~~~~ 179 (240)
T 4acp_A 101 GKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWES-NGQPENNYKAT 179 (240)
T ss_dssp TCCEEEEEECC----CEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEE-TTEECSSEEEC
T ss_pred CCEEEEEEEcCCCCccccccccccCCCCCCCEEEEECCChHHhcCCceEEEEEEeEEeCCCcEEEEEE-CCEECCCcCcc
Confidence 1 022333322222112247899999999995433 588999 55443221111
Q ss_pred e-EEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCC
Q psy16426 104 E-PILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLG 140 (194)
Q Consensus 104 ~-~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g 140 (194)
. ....++.|...+.|.|......+.+.|+|.+.+...
T Consensus 180 ~~~~~~dgt~~~~s~L~v~~~~~~~~~~ytC~V~h~~l 217 (240)
T 4acp_A 180 PPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 217 (240)
T ss_dssp CCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred CceECCCCCEEEEEEEEEChHHhCCCCEEEEEEEECCC
Confidence 1 113455566777888887766678899999998754
No 242
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.33 E-value=1.8e-11 Score=93.68 Aligned_cols=86 Identities=17% Similarity=0.185 Sum_probs=53.4
Q ss_pred eEEeeCCeEEEEEEeec-cC-CCccEEEecCc-EEee------------CCCceeEEecCCceeEEEEEEEeecCCCCCe
Q psy16426 65 VGAMEGDQMTLECHSEA-YP-KSINYWTKENG-EIIA------------QGSKYEPILLDNAYKIHMKLTIKAVTKQDFG 129 (194)
Q Consensus 65 ~~~~~g~~~~l~C~~~~-~p-~p~v~W~~~~~-~~~~------------~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g 129 (194)
..+.+|+++.|.|.+.+ .+ .+.+.|++... .... ...++...... ...+|.|.+++.+|.|
T Consensus 149 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~----~~~~L~I~~v~~~DsG 224 (280)
T 3fku_X 149 VSKGLRQTATLTCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSG----NTASLTITGLQPEDEA 224 (280)
T ss_dssp EEECTTCCEEEEEECCCCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEET----TEEEEEECSCCGGGCS
T ss_pred EEEecCCCEEEEEEecCCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccC----CEEEEEECCCCHHHCE
Confidence 55778999999999987 33 47899987321 1111 01223222111 1357999999999999
Q ss_pred EEEEEEEcCCCc---eEEEEEEEcccCC
Q psy16426 130 AYKCVSKNSLGD---TDGSIKLYGKKKK 154 (194)
Q Consensus 130 ~y~C~a~n~~g~---~~~~~~l~v~~~p 154 (194)
.|+|.+.|..+. ......|.|...+
T Consensus 225 ~Y~C~~~~~~~~~~~~g~~t~l~V~~~~ 252 (280)
T 3fku_X 225 DYYCSTWDSSLSAVVFGGGTKLTVLGQP 252 (280)
T ss_dssp EEEEEEEETTTTEEEEBCCCEEEEC---
T ss_pred EEEEEEecCCCCceEECCCEEEEECCCC
Confidence 999999987632 1223456665443
No 243
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.33 E-value=1e-11 Score=81.24 Aligned_cols=89 Identities=16% Similarity=0.202 Sum_probs=65.4
Q ss_pred eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEE
Q psy16426 54 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKC 133 (194)
Q Consensus 54 ~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C 133 (194)
.+|.+...+..+.+.+|+.+.|.|.+.+.+.+ +.|++ ++..+....++....... ...|.|.++..+|.|.|+|
T Consensus 7 ~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~-v~W~k-~g~~~~~~~~~~~~~~~~----~~~L~I~~v~~~D~G~Y~C 80 (106)
T 2dlt_A 7 GQLEVLQDIADLTVKAAEQAVFKCEVSDEKVT-GKWYK-NGVEVRPSKRITISHVGR----FHKLVIDDVRPEDEGDYTF 80 (106)
T ss_dssp CCCCEEECCCCEEEESSCCEECCCEESCSSCE-EEEEE-SSCBCCCCSSCEEEEETT----EEEEEESSCCTTTCSCEEE
T ss_pred CCCEEecCCCCeEEeCCCeEEEEEEEcCCCcc-eEEEc-CCEECcCCCCEEEEEeCC----EEEEEECCCCcCCCEEEEE
Confidence 35677777778889999999999999988877 99999 555444444444222221 3589999999999999999
Q ss_pred EEEcCCCceEEEEEE
Q psy16426 134 VSKNSLGDTDGSIKL 148 (194)
Q Consensus 134 ~a~n~~g~~~~~~~l 148 (194)
.+.|......+.+.+
T Consensus 81 ~a~n~~~~~~~~l~V 95 (106)
T 2dlt_A 81 VPDGYALSLSAKLNF 95 (106)
T ss_dssp EEETSCCCCCBCEEE
T ss_pred EEccCCceEEEEEEE
Confidence 999984444443333
No 244
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.33 E-value=1.2e-11 Score=80.28 Aligned_cols=94 Identities=18% Similarity=0.320 Sum_probs=69.3
Q ss_pred CCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEE
Q psy16426 55 PPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCV 134 (194)
Q Consensus 55 ~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~ 134 (194)
+|.+........+.+|+++.|.|.+ +.|.+.+.|++ ++..+....++.... +. ....|.|.++..+|.|.|+|.
T Consensus 8 pp~~~~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k-~~~~l~~~~~~~~~~-~~---~~~~L~I~~v~~~D~G~Y~C~ 81 (103)
T 2dku_A 8 ANCFTEELTNLQVEEKGTAVFTCKT-EHPAATVTWRK-GLLELRASGKHQPSQ-EG---LTLRLTISALEKADSDTYTCD 81 (103)
T ss_dssp CCCCSSCCCCEEEETTSEEEEEEEC-SSCCSCCEEEE-SSCBCCSSSSEEEEE-ET---TEEEEEEESCCTTTCSEEEEE
T ss_pred CCEeEecCCcEEEeCCCcEEEEEEe-CCCCCeEEEEe-CCEECCCCCeEEEEe-CC---CEEEEEECCCCcccCEEEEEE
Confidence 5555555667788999999999994 78888999999 555544444554321 11 145899999999999999998
Q ss_pred EEcCCCceEEEEEEEcccCCCCCh
Q psy16426 135 SKNSLGDTDGSIKLYGKKKKKKKK 158 (194)
Q Consensus 135 a~n~~g~~~~~~~l~v~~~p~~p~ 158 (194)
.|.....+.|.|...|..|.
T Consensus 82 ----~g~~~~~~~l~V~~~p~~p~ 101 (103)
T 2dku_A 82 ----IGQAQSRAQLLVQGRRSGPS 101 (103)
T ss_dssp ----CSSCBCCEEEEEECSCCCCS
T ss_pred ----eCCceEEEEEEEeCccCCCC
Confidence 56666677788877776654
No 245
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.33 E-value=4.5e-12 Score=81.97 Aligned_cols=86 Identities=15% Similarity=0.289 Sum_probs=67.0
Q ss_pred ceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCce
Q psy16426 63 QLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDT 142 (194)
Q Consensus 63 ~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~ 142 (194)
..+.+.+|+.+.|.|.+.+.| |.+.|++ ++..+....++. .. . ..|.|.++..+|.|.|+|.+.|..|..
T Consensus 11 ~~~~v~~G~~v~L~C~~~g~p-p~i~W~k-~g~~~~~~~~~~--~~-~-----~~L~i~~v~~~D~G~Y~C~a~n~~g~~ 80 (99)
T 2cr3_A 11 ESFLVHPGDLLQLRCRLRDDV-QSINWLR-DGVQLAESNRTR--IT-G-----EEVEVQDSVPADSGLYACVTSSPSGSD 80 (99)
T ss_dssp EECCBCTTSCEEEECCCCSSC-CEEEEEE-SSSBCCCCSSEE--EC-S-----SEEEETTCCTTTCEEEEEEEEETTEEE
T ss_pred cCeEEeCCCcEEEEEEecCCC-CeEEEEE-CCEECCCCCcEE--EE-C-----CEEEEccCCHHHCEEEEEEEEeCCceE
Confidence 445567899999999999876 7899999 444443333332 11 1 389999999999999999999999999
Q ss_pred EEEEEEEcccCCCCCh
Q psy16426 143 DGSIKLYGKKKKKKKK 158 (194)
Q Consensus 143 ~~~~~l~v~~~p~~p~ 158 (194)
...+.|.|...++.+.
T Consensus 81 ~~~~~l~V~~~~~s~~ 96 (99)
T 2cr3_A 81 TTYFSVNVSDALPSGP 96 (99)
T ss_dssp EEEEEECBCSCCSCCC
T ss_pred EEEEEEEEecCCCCcc
Confidence 8889998888776653
No 246
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.33 E-value=1.9e-11 Score=91.28 Aligned_cols=132 Identities=18% Similarity=0.243 Sum_probs=84.4
Q ss_pred eEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecC--c--------------------------------eEE-----
Q psy16426 11 MIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKEN--G--------------------------------EII----- 51 (194)
Q Consensus 11 ~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~--~--------------------------------~l~----- 51 (194)
.++..+..+.+.+|++|+|.|.+.+.+.+.+.||+.. . .|.
T Consensus 3 ~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~ 82 (245)
T 3nfj_J 3 TIHQWPATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLL 82 (245)
T ss_dssp EEEEECSEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCC
T ss_pred eeeCCCceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCC
Confidence 4567788889999999999999999889999999821 0 011
Q ss_pred ----------Eee-------CC------eEEec-------cceeE--------EeeCCeEEEEEEeeccCC-C-ccEEEe
Q psy16426 52 ----------AQV-------PP------MIWIQ-------NQLVG--------AMEGDQMTLECHSEAYPK-S-INYWTK 91 (194)
Q Consensus 52 ----------v~~-------~p------~i~~~-------~~~~~--------~~~g~~~~l~C~~~~~p~-p-~v~W~~ 91 (194)
+.. .. .+.+. ...+. +..|+.+.|.|.+.+.++ + .+.|++
T Consensus 83 ~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k 162 (245)
T 3nfj_J 83 LSDSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWV 162 (245)
T ss_dssp GGGCEEEEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE
T ss_pred hhhCEEEEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccCcCCCEEEEEEE
Confidence 211 00 01111 01111 122889999999998543 3 577998
Q ss_pred cCcEEeeCCCceeEEe-------cCCceeEEEEEEEeecCCCC-CeEEEEEEEcCCCceE
Q psy16426 92 ENGEIIAQGSKYEPIL-------LDNAYKIHMKLTIKAVTKQD-FGAYKCVSKNSLGDTD 143 (194)
Q Consensus 92 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~L~i~~~~~~d-~g~y~C~a~n~~g~~~ 143 (194)
++..+.......... .++.+...+.|.|......| .|.|+|.+.|......
T Consensus 163 -~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~~~~~~~~ 221 (245)
T 3nfj_J 163 -NGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 221 (245)
T ss_dssp -TTEEECTTEEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCSS
T ss_pred -CCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEECCCCCc
Confidence 565554332111000 24445666789998887777 6699999998765443
No 247
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.33 E-value=4.7e-11 Score=87.15 Aligned_cols=97 Identities=26% Similarity=0.408 Sum_probs=75.4
Q ss_pred eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEee-CCCceeEEecCCceeEEEEEEEeecCC-CCCeEE
Q psy16426 54 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIA-QGSKYEPILLDNAYKIHMKLTIKAVTK-QDFGAY 131 (194)
Q Consensus 54 ~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~-~~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~g~y 131 (194)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++ ++..+. ...++.....++. .+.|.|.++.. .|.|.|
T Consensus 5 ~pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~---~~~L~i~~v~~~~d~G~Y 80 (212)
T 2yd1_A 5 HPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRK-NGKKVSGTQSRYTVLEQPGG---ISILRIEPVRAGRDDAPY 80 (212)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEE-TTEECCTTSTTEEEEEETTT---EEEEEESSCCTTTTCSEE
T ss_pred CCCEEEcCCCceEEecCCEEEEEEEEccCCCCeEEEEE-CCEECCCCcceeEEEEcCCC---eEEEEEEecCCCCcCceE
Confidence 47888888888889999999999999999999999999 554443 3444443332222 36899999999 999999
Q ss_pred EEEEEcCCCc-eEEEEEEEcccCC
Q psy16426 132 KCVSKNSLGD-TDGSIKLYGKKKK 154 (194)
Q Consensus 132 ~C~a~n~~g~-~~~~~~l~v~~~p 154 (194)
+|.+.|..|. ....+.|.|...+
T Consensus 81 ~C~~~n~~g~~~~~~~~l~V~~~~ 104 (212)
T 2yd1_A 81 ECVAENGVGDAVSADATLTIYEGD 104 (212)
T ss_dssp EEEEECSSSCEEEEEEEEEEECTT
T ss_pred EEEEEeCCCCeEEeeEEEEEeccc
Confidence 9999999988 6677777776553
No 248
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.33 E-value=5.8e-12 Score=82.38 Aligned_cols=93 Identities=14% Similarity=0.251 Sum_probs=67.1
Q ss_pred CeEEeccceeEEeeCCeEEEEEEeeccCC-CccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEE
Q psy16426 56 PMIWIQNQLVGAMEGDQMTLECHSEAYPK-SINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCV 134 (194)
Q Consensus 56 p~i~~~~~~~~~~~g~~~~l~C~~~~~p~-p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~ 134 (194)
+.|........+.+|+.+.|.|.+.+.+. +.+.|++ ++..+....++....... ..+|.|.++..+|.|.|+|.
T Consensus 9 ~~~~~~~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k-~g~~i~~~~r~~~~~~~~----~~~L~I~~v~~~D~G~Y~C~ 83 (104)
T 2eny_A 9 VGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTV-GGKTVGSSSRFQATRQGR----KYILVVREAAPSDAGEVVFS 83 (104)
T ss_dssp CCCSBCCCCEEEESSCCEEEEEECSSCCCSSCBCCBS-SSSBCSBCSSCEEEEETT----EEEEEECSCCTTTCSCEEEE
T ss_pred CEEEecCCCcEEcCCCcEEEEEEEcCCCCCceeEEEE-CCEECCCCCCEEEEEcCC----EEEEEECCCCHHHCEEEEEE
Confidence 34555556778899999999999988774 4789999 555544444554322222 35899999999999999998
Q ss_pred EEcCCCceEEEEEEEcccCCCCC
Q psy16426 135 SKNSLGDTDGSIKLYGKKKKKKK 157 (194)
Q Consensus 135 a~n~~g~~~~~~~l~v~~~p~~p 157 (194)
+.| ...+..|.|...|..+
T Consensus 84 a~~----~~~~a~L~V~~~p~~~ 102 (104)
T 2eny_A 84 VRG----LTSKASLIVRERSGPS 102 (104)
T ss_dssp ETT----EEEEECEEEECCCSSC
T ss_pred ECC----eeEEEEEEEeCCCcCC
Confidence 855 4566777777776544
No 249
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.32 E-value=7.1e-12 Score=99.96 Aligned_cols=128 Identities=12% Similarity=0.134 Sum_probs=82.7
Q ss_pred EEcCCeee-eeCCCcEEEEeeeecc---CC-ceeEEEecCceEE------------------------------------
Q psy16426 13 WIQNQLVG-AMEGDQMTLECHSEAY---PK-SINYWTKENGEII------------------------------------ 51 (194)
Q Consensus 13 ~~~~~~~~-v~~G~~v~L~C~~~g~---p~-~~v~W~k~~~~l~------------------------------------ 51 (194)
+..+.... +.+|++++|.|.+.|. |. ..|+|+++++.+.
T Consensus 171 ~~~p~~~~~~~~g~~v~L~C~~~g~~P~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C 250 (376)
T 2aty_A 171 IFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKC 250 (376)
T ss_pred EeCcCHHHceeeCCeeEEEEEEeccccCCCccEEEEEECCccccCcccCCCCcccCCcEEEEEEEEechHhccCCCEEEE
Confidence 44444445 7889999999999887 32 3699999875531
Q ss_pred -E-------------------eeCCeEEeccceeEEeeCCeEEEEEEeeccCC--CccEEEecCcEEeeCCCcee-EEec
Q psy16426 52 -A-------------------QVPPMIWIQNQLVGAMEGDQMTLECHSEAYPK--SINYWTKENGEIIAQGSKYE-PILL 108 (194)
Q Consensus 52 -v-------------------~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~--p~v~W~~~~~~~~~~~~~~~-~~~~ 108 (194)
+ ..+|.+.+.+.......|+.+.|.|.+.++.+ +.+.|++ ++.......... ....
T Consensus 251 ~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k-~g~~~~~~~~~~~~~~~ 329 (376)
T 2aty_A 251 RVNSAAFPAPIEKTISKTKGRPKAPQLYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQW-NGQPAENYKNTQPIMNT 329 (376)
T ss_pred EEecCCCCCceEEEEcCCCCCCcCCeEEeeCCCHHHhcCCceEEEEEEEEeECCCcEEEEEE-CCEECCCeEeCCceECC
Confidence 0 11233333222222234788999999998643 4688999 554432221111 1234
Q ss_pred CCceeEEEEEEEeecCCCCCeEEEEEEEcCCCc
Q psy16426 109 DNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGD 141 (194)
Q Consensus 109 ~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~ 141 (194)
++.|...+.|.|......|.|.|+|.+.|....
T Consensus 330 dgty~~~s~L~i~~~~~~~~~~YtC~v~h~~l~ 362 (376)
T 2aty_A 330 NESYFVYSKLNVQKSNWEAGNTFTCSVLHEGLH 362 (376)
T ss_pred CCCEEEEEEEEEcHHHhCCCCcEEEEEEeCCCC
Confidence 455667778888888778899999999987543
No 250
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.32 E-value=6.4e-12 Score=80.91 Aligned_cols=80 Identities=21% Similarity=0.369 Sum_probs=61.9
Q ss_pred cceeEEeeCCeEEEEEEee-ccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCC
Q psy16426 62 NQLVGAMEGDQMTLECHSE-AYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLG 140 (194)
Q Consensus 62 ~~~~~~~~g~~~~l~C~~~-~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g 140 (194)
+....+.+|+.+.|.|.+. +.|.+.+.|++++...... .. ... .++|.|.++..+|.|.|+|.+.|..|
T Consensus 17 ~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~~~--~~--~~~------~~~L~i~~v~~~D~G~Y~C~a~n~~g 86 (98)
T 1gl4_B 17 QRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPS--RA--MDF------NGILTIRNVQPSDAGTYVCTGSNMFA 86 (98)
T ss_dssp CCEEEECTTCCEEEEEEEEESSSCCEEEEEEGGGBCCCT--TE--EEE------TTEEEECSCCGGGCEEEEEEEECSSC
T ss_pred CCCeEEecCCCEEEEEeCCCCCCCcEEEEEeCCCCCCCc--ee--ecC------CCEEEEeCCChhhCEEEEEEecCCCC
Confidence 3566788999999999998 6788999999854333221 11 111 23899999999999999999999999
Q ss_pred ceEEEEEEEcc
Q psy16426 141 DTDGSIKLYGK 151 (194)
Q Consensus 141 ~~~~~~~l~v~ 151 (194)
.....+.|.|.
T Consensus 87 ~~~~~~~l~V~ 97 (98)
T 1gl4_B 87 MDQGTATLHVQ 97 (98)
T ss_dssp EEEEEEEEEEC
T ss_pred ccccEEEEEEe
Confidence 98888887763
No 251
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.31 E-value=6.8e-11 Score=87.96 Aligned_cols=82 Identities=13% Similarity=0.287 Sum_probs=52.7
Q ss_pred eC-CeEEEEEEeecc-CCC-ccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCC--CCCeEEEEEEEcCCCceE
Q psy16426 69 EG-DQMTLECHSEAY-PKS-INYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTK--QDFGAYKCVSKNSLGDTD 143 (194)
Q Consensus 69 ~g-~~~~l~C~~~~~-p~p-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~--~d~g~y~C~a~n~~g~~~ 143 (194)
.| +.+.|.|.+.+. |.| .++|++.++..+.....+.....++.+...+.|.|..... +|.|.|+|.+.|..+...
T Consensus 139 ~g~~~v~L~C~~~g~~P~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~~~ 218 (232)
T 1dn0_B 139 SDTSSVAVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNGNKE 218 (232)
T ss_dssp --CCSEEEEEEEEEEBSSCCEEEEEETTSCEECCEEECCCEEETTEEEEEEEEEECTTCC---CCCEEEEEEECTTCCEE
T ss_pred CCCCcEEEEEEEEEEeCCCeEEEEEcCCCCceeeEEECCccccCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCCCcc
Confidence 56 889999999886 665 8999983333332210000111223455567899988876 789999999999988776
Q ss_pred EEEEEEc
Q psy16426 144 GSIKLYG 150 (194)
Q Consensus 144 ~~~~l~v 150 (194)
....+.+
T Consensus 219 ~~~~i~~ 225 (232)
T 1dn0_B 219 KNVPLPV 225 (232)
T ss_dssp EEEECCC
T ss_pred eeEecCC
Confidence 6555544
No 252
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.31 E-value=2.4e-12 Score=85.68 Aligned_cols=98 Identities=24% Similarity=0.427 Sum_probs=65.2
Q ss_pred eeCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCC---ceeEEecCCceeEEEEEEEeecCCCCCe
Q psy16426 53 QVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGS---KYEPILLDNAYKIHMKLTIKAVTKQDFG 129 (194)
Q Consensus 53 ~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~---~~~~~~~~~~~~~~~~L~i~~~~~~d~g 129 (194)
..+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+.... ........+.......+.+.++..+|.|
T Consensus 7 ~~pP~i~~~p~~~~v~~G~~v~L~C~~~g~P~p~v~W~k-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~D~G 85 (117)
T 2v9t_A 7 DFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYK-GGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEG 85 (117)
T ss_dssp CEEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEE-TTEECCCTTTCSSCSEEECTTSCEEESSCCCBTTBCSSCE
T ss_pred cCCCeeEcCCCCEEEcCCCcEEEEEECCccCCCeEEEEE-CCEeccccCCCCcceeEEecCCcEEEEEEEeCCCCcCcCE
Confidence 457777777777888999999999999999999999999 444433221 1111111221111112223356789999
Q ss_pred EEEEEEEcCCCceEE-EEEEEcc
Q psy16426 130 AYKCVSKNSLGDTDG-SIKLYGK 151 (194)
Q Consensus 130 ~y~C~a~n~~g~~~~-~~~l~v~ 151 (194)
.|+|.|.|..|...+ .+.|.+.
T Consensus 86 ~Y~C~a~N~~G~~~s~~~~l~~~ 108 (117)
T 2v9t_A 86 VYVCVARNYLGEAVSHDASLEVA 108 (117)
T ss_dssp EEEEEEEETTEEEECCCEEEEEC
T ss_pred EEEEEEEeCccceEeeeEEEEhh
Confidence 999999999998765 3555554
No 253
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.31 E-value=1.6e-11 Score=91.65 Aligned_cols=73 Identities=19% Similarity=0.280 Sum_probs=49.9
Q ss_pred eCCeEEEEEEeeccCC-C-ccEEEecCcEEeeCCCceeEEe-------cCCceeEEEEEEEeecCCCC-CeEEEEEEEcC
Q psy16426 69 EGDQMTLECHSEAYPK-S-INYWTKENGEIIAQGSKYEPIL-------LDNAYKIHMKLTIKAVTKQD-FGAYKCVSKNS 138 (194)
Q Consensus 69 ~g~~~~l~C~~~~~p~-p-~v~W~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~L~i~~~~~~d-~g~y~C~a~n~ 138 (194)
.|+.+.|.|.+.+.++ + .+.|++ ++..+.......... .++.+...+.|.|.....+| .|.|+|.+.|.
T Consensus 138 ~g~~v~l~C~~~g~~p~~~~v~W~~-~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~ytC~v~~~ 216 (245)
T 4ei6_B 138 HTQKATLVCLATGFYPDHVELSWWV-NGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFY 216 (245)
T ss_dssp HHSEEEEEEEEEEEBSSCEEEEEEE-TTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEEC
T ss_pred CCCceEEEEEEeeEeCCCeEEEEEE-CCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEEC
Confidence 4889999999988543 4 788999 565554332211000 24445566789999887777 89999999987
Q ss_pred CCce
Q psy16426 139 LGDT 142 (194)
Q Consensus 139 ~g~~ 142 (194)
....
T Consensus 217 ~l~~ 220 (245)
T 4ei6_B 217 GLSE 220 (245)
T ss_dssp CBCT
T ss_pred CCCC
Confidence 5443
No 254
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.31 E-value=2e-11 Score=87.88 Aligned_cols=97 Identities=26% Similarity=0.345 Sum_probs=74.0
Q ss_pred eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEE
Q psy16426 54 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKC 133 (194)
Q Consensus 54 ~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C 133 (194)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.....++......+. .+.|.|.++..+|.|.|+|
T Consensus 3 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~---~~~L~i~~~~~~d~G~Y~C 79 (197)
T 2j8h_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGG---YHQLIIASVTDDDATVYQV 79 (197)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTT---EEEEEECSCCGGGCSEEEE
T ss_pred CCCEEEEcCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCC---EEEEEECcCCHHhCEEEEE
Confidence 3677777777888999999999999999999999999944333333334432222222 3589999999999999999
Q ss_pred EEEcCCCceEEEEEEEcccC
Q psy16426 134 VSKNSLGDTDGSIKLYGKKK 153 (194)
Q Consensus 134 ~a~n~~g~~~~~~~l~v~~~ 153 (194)
.+.|..|.....+.|.|...
T Consensus 80 ~~~n~~g~~~~~~~l~V~~~ 99 (197)
T 2j8h_A 80 RATNQGGSVSGTASLEVEVP 99 (197)
T ss_dssp EEEETTEEEEEEEEEEEEEE
T ss_pred EEEECCCceeEEEEEEEcCC
Confidence 99999888777777776543
No 255
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.31 E-value=6.5e-11 Score=78.18 Aligned_cols=92 Identities=23% Similarity=0.302 Sum_probs=68.8
Q ss_pred CCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEE
Q psy16426 55 PPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCV 134 (194)
Q Consensus 55 ~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~ 134 (194)
+|.+...+....+.+|+++.|.|.+.+. |.+.|++ ++..+....++.... ++. ...|.|.++..+|.|.|+|.
T Consensus 19 pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k-~~~~l~~~~~~~~~~-~~~---~~~L~I~~v~~~D~G~Y~C~ 91 (113)
T 2edh_A 19 PIKFTEGLRNEEATEGATAVLRCELSKM--APVEWWK-GHETLRDGDRHSLRQ-DGA---RCELQIRGLVAEDAGEYLCM 91 (113)
T ss_dssp CCCEEECCCCCEECTTSCEEEEEEESSC--CCCEEEE-SSSBCCCSSSEEEEE-ETT---EEEEEECSCCSTTCEEEEEE
T ss_pred CCcccccCCceEEeCCCeEEEEEEECCC--CcEEEEE-CCEECCCCCcEEEEE-CCC---EEEEEECCCChhhCEEEEEE
Confidence 4567666677788999999999999764 7899999 555444444554322 221 35899999999999999999
Q ss_pred EEcCCCceEEEEEEEcccCCCCC
Q psy16426 135 SKNSLGDTDGSIKLYGKKKKKKK 157 (194)
Q Consensus 135 a~n~~g~~~~~~~l~v~~~p~~p 157 (194)
+ +.....+.|.|...|...
T Consensus 92 a----~~~~~~~~l~V~~~p~~~ 110 (113)
T 2edh_A 92 C----GKERTSAMLTVRAMPSGP 110 (113)
T ss_dssp E----TTEEEEEEEEECCCCCSS
T ss_pred e----CCCCEEEEEEEeCCCCCc
Confidence 9 667777888887776543
No 256
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.31 E-value=5.2e-12 Score=99.19 Aligned_cols=134 Identities=16% Similarity=0.262 Sum_probs=83.7
Q ss_pred cCCeEEEcCCeeeeeCCCcEEEEeeeecc-CC-ceeEEEecCceE---------------------E-------------
Q psy16426 8 VPPMIWIQNQLVGAMEGDQMTLECHSEAY-PK-SINYWTKENGEI---------------------I------------- 51 (194)
Q Consensus 8 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~-p~-~~v~W~k~~~~l---------------------~------------- 51 (194)
.+|.+...+....+.+|++++|.|.+.|. |. +.|.|++++..+ .
T Consensus 119 ~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~dG~Y~C 198 (344)
T 1za6_B 119 KGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYIC 198 (344)
T ss_dssp BCCEEEEECCSCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHHBCEEE
T ss_pred CCCeEEEccccccccCCCcEEEEEEEeeEECCCeEEEEecCCccCceeECCCeECCCCCEEEEEEEEEcHHHcCCCcEEE
Confidence 46776655544557789999999999986 54 799999987431 0
Q ss_pred -Ee---------------------------------------eCCeEEeccceeEEeeCCeEEEEEEeeccCC--CccEE
Q psy16426 52 -AQ---------------------------------------VPPMIWIQNQLVGAMEGDQMTLECHSEAYPK--SINYW 89 (194)
Q Consensus 52 -v~---------------------------------------~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~--p~v~W 89 (194)
+. .+|.+...........|..+.|.|.+.|.++ +.+.|
T Consensus 199 ~a~n~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W 278 (344)
T 1za6_B 199 NVNHKPSNTKVDKKVEPKSCDKTHTCPPCGGGSSGGGSGGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEW 278 (344)
T ss_dssp EEEEGGGTEEEEEEECCCCC--------------------CCBCCEEEEECCCGGGGGSSSEEEEEEEEEEBSSCCEEEE
T ss_pred EEEeCCCCccceEeecccccccccccCCCCCCccccccCCCCcCCEEEEeCCChHhccCCcEEEEEEEeeEECCCeEEEE
Confidence 00 1122221111111124667999999998643 47889
Q ss_pred EecCcEEeeCCCceeE-EecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCce
Q psy16426 90 TKENGEIIAQGSKYEP-ILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDT 142 (194)
Q Consensus 90 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~ 142 (194)
++ ++..+........ ...++.+...+.|.|.....+|.|.|+|.+.|.....
T Consensus 279 ~k-~g~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~~~~l~~ 331 (344)
T 1za6_B 279 ES-NGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHN 331 (344)
T ss_dssp ES-SSSCCCSEEECCCEECTTSCEEEEEEEEECHHHHHTTCEEEEEEECTTSTT
T ss_pred EE-CCeECCCcEecceEECCCCcEEEEEEEEEChHHccCCCeEEEEEEcCCCCC
Confidence 98 4443322111111 1334445556778888777778999999999976543
No 257
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.31 E-value=5.2e-11 Score=91.58 Aligned_cols=72 Identities=19% Similarity=0.356 Sum_probs=49.7
Q ss_pred eeEEeeCCeEEEEEEeeccCCC------ccEEEecC-cE---E-eeC--------CCceeEEecCCceeEEEEEEEeecC
Q psy16426 64 LVGAMEGDQMTLECHSEAYPKS------INYWTKEN-GE---I-IAQ--------GSKYEPILLDNAYKIHMKLTIKAVT 124 (194)
Q Consensus 64 ~~~~~~g~~~~l~C~~~~~p~p------~v~W~~~~-~~---~-~~~--------~~~~~~~~~~~~~~~~~~L~i~~~~ 124 (194)
.+.+.+|+++.|.|.+.+.+.+ .++|++++ +. . ... ..++..... ....+|.|.+++
T Consensus 168 ~~~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~----~~~~~L~I~~v~ 243 (291)
T 2gki_A 168 SLAVSAGEKVTMSCKSSQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGS----GTDFTLTISSVQ 243 (291)
T ss_dssp EEEEETTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE----TTEEEEEESSCC
T ss_pred EEEEcCCCcEEEEEEcCCccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEec----CCEEEEEECCCC
Confidence 4457789999999999888765 89999853 11 1 111 122221111 113589999999
Q ss_pred CCCCeEEEEEEEcCC
Q psy16426 125 KQDFGAYKCVSKNSL 139 (194)
Q Consensus 125 ~~d~g~y~C~a~n~~ 139 (194)
.+|.|.|+|.+.|..
T Consensus 244 ~~DsG~Y~C~a~~~~ 258 (291)
T 2gki_A 244 AEDLAVYYCKQSYYH 258 (291)
T ss_dssp GGGCEEEEEEEEETT
T ss_pred HHHCEEEEEEEccCC
Confidence 999999999999853
No 258
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.30 E-value=1.6e-11 Score=105.56 Aligned_cols=128 Identities=14% Similarity=0.186 Sum_probs=90.3
Q ss_pred CCcEEEEeeeeccCCceeEEEecCceEE--------------------------------------E-----eeCCeEEe
Q psy16426 24 GDQMTLECHSEAYPKSINYWTKENGEII--------------------------------------A-----QVPPMIWI 60 (194)
Q Consensus 24 G~~v~L~C~~~g~p~~~v~W~k~~~~l~--------------------------------------v-----~~~p~i~~ 60 (194)
++++.|.|.+.|.|.+.+.|.+++..+. + ..+|.+.
T Consensus 91 ~g~l~v~c~~~g~P~p~i~W~k~g~~~~~~~~~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~~v~~~~~~~~~~p~~~- 169 (731)
T 2v5y_A 91 PGLLNVYVKVNNGPLGNPIWNISGDPTRTWNRAELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGHPCTRTPHFL- 169 (731)
T ss_dssp SEEEEEEEEETTCCCCSEEEEECCCCCSSCEEEEEEECCCTTSCEEEEEEEEECSSCCEEEECCBEEESSCCSSSCEEC-
T ss_pred cceEEEEEecCCCCccceeEEEeCCcCCceeEEEEEEeecCCCceEEEEEEEecCCceEEEEeeEEeeecccccccccc-
Confidence 4589999999999999999999874321 0 1234444
Q ss_pred ccceeEEeeCCeEEEEEEeeccCCCccE-EEe-cCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcC
Q psy16426 61 QNQLVGAMEGDQMTLECHSEAYPKSINY-WTK-ENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNS 138 (194)
Q Consensus 61 ~~~~~~~~~g~~~~l~C~~~~~p~p~v~-W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~ 138 (194)
......+..|+.+.|.|.+.|.|.|.+. |+. .++..+.... . .... .....++|.|.++...|.|.|+|.|.|.
T Consensus 170 ~~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~-~--~~~~-~~~~~~~l~I~~~~~~d~g~Y~c~A~n~ 245 (731)
T 2v5y_A 170 RIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKE-I--KVTS-SRRFIASFNVVNTTKRDAGKYRCMIRTE 245 (731)
T ss_dssp CCCCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEE-E--EECC-SSEEEEEEEECSCCTTTCEEEEEEEEET
T ss_pred cccceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccccc-e--EEec-cccceEEEEEcccccccCeEEEEEEECC
Confidence 3345667889999999999999999988 772 2444332211 1 1111 1123579999999999999999999999
Q ss_pred CCc-eEEEEEEEcccCCCC
Q psy16426 139 LGD-TDGSIKLYGKKKKKK 156 (194)
Q Consensus 139 ~g~-~~~~~~l~v~~~p~~ 156 (194)
.|. ......|.|...|..
T Consensus 246 ~G~~~s~~~~l~V~~~P~~ 264 (731)
T 2v5y_A 246 GGVGISNYAELVVKEPPVP 264 (731)
T ss_dssp TEEEECCCEEEEEECCCCB
T ss_pred CCCcceeeEEEEEecCCCC
Confidence 997 555566776665553
No 259
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.30 E-value=2.8e-11 Score=86.80 Aligned_cols=97 Identities=25% Similarity=0.371 Sum_probs=74.9
Q ss_pred eeCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEE
Q psy16426 53 QVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYK 132 (194)
Q Consensus 53 ~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~ 132 (194)
..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++ ++.......++.... +.. ..+|.|.++..+|.|.|+
T Consensus 5 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~-~~~---~~~L~i~~~~~~d~G~Y~ 79 (197)
T 3lcy_A 5 GEAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYR-FGKELIQSRKYKMSS-DGR---THTLTVMTEEQEDEGVYT 79 (197)
T ss_dssp CEEEEEEECCCCEEEETTSEEEEEEEEEEESCCEEEEEE-TTEEECCCSSEEEEE-SSS---EEEEEEECCSGGGCEEEE
T ss_pred CCCCcccccCCceEEeCCCcEEEEEEEecCCCCEEEEEE-CCEECCCCccEEEEe-CCC---EEEEEEecCCccCCEEEE
Confidence 356777777778888999999999999999989999999 555554444444222 221 458999999999999999
Q ss_pred EEEEcCCCceEEEEEEEcccCC
Q psy16426 133 CVSKNSLGDTDGSIKLYGKKKK 154 (194)
Q Consensus 133 C~a~n~~g~~~~~~~l~v~~~p 154 (194)
|.+.|..|.....+.|.|...|
T Consensus 80 C~~~n~~~~~~~~~~l~v~~~p 101 (197)
T 3lcy_A 80 CIATNEVGEVETSSKLLLQATP 101 (197)
T ss_dssp EEEECSSCEEEEEEEEEEEEEE
T ss_pred EEEECCCCceeEEEEEEEEcCC
Confidence 9999999888777777765443
No 260
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.30 E-value=3.4e-11 Score=77.15 Aligned_cols=86 Identities=19% Similarity=0.274 Sum_probs=62.3
Q ss_pred CeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEE
Q psy16426 56 PMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVS 135 (194)
Q Consensus 56 p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a 135 (194)
+.|...+....+.+|+.+.|.|.+ +.+.+.+.|++ ++..+....++....... ..+|.|.++..+|.|.|+|.+
T Consensus 9 ~~~~~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k-~~~~l~~~~~~~~~~~~~----~~~L~I~~v~~~D~G~Y~C~a 82 (95)
T 2k1m_A 9 SAFSKKPRSVEVAAGSPAVFEAET-ERAGVKVRWQR-GGSDISASNKYGLATEGT----RHTLTVREVGPADQGSYAVIA 82 (95)
T ss_dssp CCCSBCCCCEEEETTSCEEEEEEC-SSSSCCCEEEC-SSSEECSSTTCEEEEETT----EEEEEESSCCTTCCSEEEEEE
T ss_pred CeeEeCCCcEEEeCCCcEEEEEEe-CCCCCeEEEEE-CCEECCCCCcEEEEEcCC----EEEEEEcCCCcccCEEEEEEE
Confidence 344445567778999999999999 77888999999 554444444544322221 358999999999999999999
Q ss_pred EcCCCceEEEEEEEcc
Q psy16426 136 KNSLGDTDGSIKLYGK 151 (194)
Q Consensus 136 ~n~~g~~~~~~~l~v~ 151 (194)
|.......|.|.
T Consensus 83 ----g~~~~~~~l~V~ 94 (95)
T 2k1m_A 83 ----GSSKVKFDLKVI 94 (95)
T ss_dssp ----TTEEEEEEEEEE
T ss_pred ----CCceEEEEEEEe
Confidence 455566666653
No 261
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.30 E-value=1.7e-11 Score=92.37 Aligned_cols=82 Identities=16% Similarity=0.301 Sum_probs=54.2
Q ss_pred EeeCCeEEEEEEeec-cCCC-ccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEE
Q psy16426 67 AMEGDQMTLECHSEA-YPKS-INYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDG 144 (194)
Q Consensus 67 ~~~g~~~~l~C~~~~-~p~p-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~ 144 (194)
+..|+.+.|.|.+.+ .|.+ .+.|++++...... .......++.+...+.|.|.....+| |.|+|.+.|..+....
T Consensus 136 ~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~~~~~~--~~~~~~~~g~~~~~s~L~i~~~~~~d-g~ytC~v~~~~~~~~~ 212 (253)
T 3liz_H 136 AQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVH--TFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKV 212 (253)
T ss_dssp ---CCEEEEEEEEEEEBSSCCEEEEGGGTBCTTEE--ECCCEEETTEEEEEEEEEEETTSTTT-SCCEEEEEEGGGTEEE
T ss_pred cCCCCcEEEEEEEeeEeCCCeEEEEEeCCeecceE--eCCccccCCeEEEEEEEEEcHHHCCC-ceEEEEEEECCCCcce
Confidence 346889999999998 5655 78899844311000 00001122445556789999999889 9999999999887776
Q ss_pred EEEEEcc
Q psy16426 145 SIKLYGK 151 (194)
Q Consensus 145 ~~~l~v~ 151 (194)
...+.+.
T Consensus 213 ~~~~~~~ 219 (253)
T 3liz_H 213 DKKIVPR 219 (253)
T ss_dssp EEECCCC
T ss_pred EEEecCc
Confidence 6666544
No 262
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.29 E-value=1.6e-12 Score=105.06 Aligned_cols=120 Identities=14% Similarity=0.221 Sum_probs=78.5
Q ss_pred eeCCCcEEEEeeeeccC----CceeEEEecCceEE---------------------------------------------
Q psy16426 21 AMEGDQMTLECHSEAYP----KSINYWTKENGEII--------------------------------------------- 51 (194)
Q Consensus 21 v~~G~~v~L~C~~~g~p----~~~v~W~k~~~~l~--------------------------------------------- 51 (194)
+.+|++++|.|.+.|.+ .+.|+|++++..+.
T Consensus 242 v~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 321 (434)
T 1igy_B 242 LLITVTPKVTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCRVNSAAFPA 321 (434)
T ss_dssp HSTTSCCEEEEEECCCCSSCCCCCBCBBSSSCCBCCCSCCCCCCCCSSSCCCCCCEECCHHHHHHTCCCBCCBCCSSCSS
T ss_pred cccCCCcEEEEEEeccccCCCCeEEEEEeCCcccCCcccCcceeCCCCcEEEEEEEEECHHHccCCCcEEEEEECCCCCC
Confidence 78999999999999873 35899999865431
Q ss_pred -----E------eeCCeEEeccceeEEeeCCeEEEEEEeeccCCC--ccEEEecCcEEeeCCCceeE-EecCCceeEEEE
Q psy16426 52 -----A------QVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKS--INYWTKENGEIIAQGSKYEP-ILLDNAYKIHMK 117 (194)
Q Consensus 52 -----v------~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p--~v~W~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 117 (194)
+ ..+|.+...+.......|..+.|.|.+.|.+++ .+.|+++ +..+........ ...++.+...+.
T Consensus 322 ~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~-g~~l~~~~~~~~~~~~~g~~~~~s~ 400 (434)
T 1igy_B 322 PIEKTISKTKGKPRAPQVYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQSD-GQAPENYKNTQPIMDTDGSYFVYSK 400 (434)
T ss_dssp CCCCCCCCCCSCCBCCCCEEECCCSSSSSSSEEEEEEEEEEEBCSCEEEEEEET-TSCCSCCEECCCCCCSSSCEEEEEE
T ss_pred ceeEEEeccCCCCcCCEEEEECCCHHHhcCCcEEEEEEEEeeECCCeEEEEEEC-CEecCCceeccceeCCCCcEEEEEE
Confidence 1 123433322222222357789999999986433 7899994 443322211110 123344556678
Q ss_pred EEEeecCCCCCeEEEEEEEcCCCc
Q psy16426 118 LTIKAVTKQDFGAYKCVSKNSLGD 141 (194)
Q Consensus 118 L~i~~~~~~d~g~y~C~a~n~~g~ 141 (194)
|.|.....+|.|.|+|.|.|....
T Consensus 401 l~i~~~~~~~~g~YtC~a~n~~l~ 424 (434)
T 1igy_B 401 LNVQKSNWEAGNTFTCSVLHEGLH 424 (434)
T ss_dssp EEEEHHHHHTTCCEEEEEEETTSG
T ss_pred EEECchhccCCCEEEEEEEcCCCC
Confidence 888888778899999999998654
No 263
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.29 E-value=1.8e-11 Score=78.18 Aligned_cols=78 Identities=21% Similarity=0.336 Sum_probs=56.1
Q ss_pred CCeEEeccce--eEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEE
Q psy16426 55 PPMIWIQNQL--VGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYK 132 (194)
Q Consensus 55 ~p~i~~~~~~--~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~ 132 (194)
|+.|..+... +.+.+|+.+.|.|.+.+ |.+.+.|++ ++..+..+.++.....+. ..+|.|.++..+|.|.|+
T Consensus 4 P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k-~g~~i~~~~~~~i~~~~~----~~~L~I~~v~~~D~G~Y~ 77 (91)
T 2lvc_A 4 PVHIVDPREHVFVHAITSECVMLACEVDR-EDAPVRWYK-DGQEVEESDFVVLENEGP----HRRLVLPATQPSDGGEFQ 77 (91)
T ss_dssp CCCCCBCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEE-TTSCCCCCSSCEEEEETT----EEEEEESSCCGGGCSEEE
T ss_pred CcEEeccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEE-CCEEeeeeeeeeEEecCC----eEEEEeCCCChhhcEEEE
Confidence 4545434333 33467999999999865 888999999 565555555554333222 358999999999999999
Q ss_pred EEEEcC
Q psy16426 133 CVSKNS 138 (194)
Q Consensus 133 C~a~n~ 138 (194)
|.|.|.
T Consensus 78 C~a~n~ 83 (91)
T 2lvc_A 78 CVAGDE 83 (91)
T ss_dssp EECSSC
T ss_pred EEEcce
Confidence 998764
No 264
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.28 E-value=3.6e-11 Score=89.07 Aligned_cols=78 Identities=18% Similarity=0.356 Sum_probs=51.6
Q ss_pred eeCCeEEEEEEeecc-CCC-ccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEE
Q psy16426 68 MEGDQMTLECHSEAY-PKS-INYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGS 145 (194)
Q Consensus 68 ~~g~~~~l~C~~~~~-p~p-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~ 145 (194)
..|+.+.|.|.+.+. |.| .+.|++++ ...... ........+.+...+.|.|..+..+| |.|+|.+.|..+.....
T Consensus 143 ~~g~~~~l~C~~~g~~P~p~~v~W~~~~-~~~~~~-~~~~~~~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~~~ 219 (228)
T 3bae_H 143 TTGSSVTLGCLVKGYFPEPVTLTWNSGS-LSSGVH-TFPAVLQSDLYTLSSSVTVTSSTWPS-ESITCNVAHPASSTKVD 219 (228)
T ss_dssp -CCSEEEEEEEEEEEBSSCCEEEEGGGT-CCTTEE-EEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEE
T ss_pred cCCCCEEEEEEEccEeCCCEEEEEeeCC-cccCce-EcCceeCCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCCCCCEE
Confidence 468899999999886 666 89999844 321100 11111122344556789999888766 99999999998876544
Q ss_pred EEE
Q psy16426 146 IKL 148 (194)
Q Consensus 146 ~~l 148 (194)
..+
T Consensus 220 ~~~ 222 (228)
T 3bae_H 220 KKI 222 (228)
T ss_dssp EEC
T ss_pred EEc
Confidence 433
No 265
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.28 E-value=8e-11 Score=86.58 Aligned_cols=74 Identities=14% Similarity=0.231 Sum_probs=50.5
Q ss_pred eeCCeEEEEEEeec-cCC--CccEEEecCcEEeeCCCceeEE-ecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCce
Q psy16426 68 MEGDQMTLECHSEA-YPK--SINYWTKENGEIIAQGSKYEPI-LLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDT 142 (194)
Q Consensus 68 ~~g~~~~l~C~~~~-~p~--p~v~W~~~~~~~~~~~~~~~~~-~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~ 142 (194)
.+|+.+.|.|.+.+ .|. +.+.|++++..+.... ..... ..++.+...+.|.|......|.|.|+|.+.+..+..
T Consensus 136 ~~g~~v~L~C~~~~~~P~~~~~v~W~~~g~~~~~~~-~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~v~~~~~~~ 213 (221)
T 3m8o_H 136 QPDGNVVIACLVQGFFPQEPLSVTWSESGQGVTARN-FPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPS 213 (221)
T ss_dssp CCTTEEEEEEEEEEEBSSCSEEEEESCCSTTCEEEE-CCCEECSSSSCEEEEEEEEEEGGGSCTTCEEEEEEEETTSCC
T ss_pred ccCCCEEEEEEEEeeECCCCEEEEEEECCEECceEE-cCceeeCCCCcEEEEEEEEECHHHcCCCCeEEEEEEECCCCc
Confidence 46889999999998 554 3788998443221110 00011 134445556789999999999999999999987654
No 266
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.28 E-value=4.9e-11 Score=90.52 Aligned_cols=75 Identities=17% Similarity=0.294 Sum_probs=48.7
Q ss_pred eeCCeEEEEEEeecc-CCC-ccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEE
Q psy16426 68 MEGDQMTLECHSEAY-PKS-INYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGS 145 (194)
Q Consensus 68 ~~g~~~~l~C~~~~~-p~p-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~ 145 (194)
..|+.+.|.|.+.+. |.+ .+.|++++..+.... ... ....+.+...+.|.|.....+| |.|+|.+.|........
T Consensus 142 ~~g~~v~L~C~~~g~~P~~i~v~W~k~g~~~~~~~-~~~-~~~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~~~~~~ 218 (261)
T 2xqy_G 142 TTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHT-FPA-VLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVD 218 (261)
T ss_dssp -CCSEEEEEEEEEEEBSSCCEEEEGGGTCCTTEEE-CCC-EEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEE
T ss_pred cCCCcEEEEEEEEeEeCCCCEEEEecCCCcCceEe-cCc-eecCCcEEEEEEEEEeccccCC-CEEEEEEEECCCCccEE
Confidence 458899999999875 655 889998443211000 001 1112344556789999888778 99999999976554433
No 267
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.28 E-value=4.6e-11 Score=87.26 Aligned_cols=97 Identities=21% Similarity=0.326 Sum_probs=73.0
Q ss_pred eeCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeec-CCCCCeEE
Q psy16426 53 QVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAV-TKQDFGAY 131 (194)
Q Consensus 53 ~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~-~~~d~g~y 131 (194)
..+|.|...+....+.+|+.+.|.|.+.+.|.+.+.|++ ++..............+. ..+.|.|.++ +.+|.|.|
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k-~~~~~~~~~~~~~~~~~~---~~~~L~i~~v~~~~d~G~Y 79 (212)
T 2yd6_A 4 ETPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNK-KGKKVSNQRFEVIEFDDG---SGSVLRIQPLRTPRDEAIY 79 (212)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEE-TTEECCCTTEEEEEEGGG---TEEEEEECSCCTTTTCEEE
T ss_pred CCCCeEEeCcceeEEecCCeEEEEEEEeeCCCCEEEEEE-CCcCCCCCceeEEEEcCC---CceEEEEeccCCCCCCeEE
Confidence 357778777778888999999999999999999999999 555444332221111111 1468999999 59999999
Q ss_pred EEEEEcCCCceEEEEEEEcccC
Q psy16426 132 KCVSKNSLGDTDGSIKLYGKKK 153 (194)
Q Consensus 132 ~C~a~n~~g~~~~~~~l~v~~~ 153 (194)
+|.+.|..|.....+.|.|...
T Consensus 80 ~C~a~n~~g~~~~~~~l~V~~~ 101 (212)
T 2yd6_A 80 ECVASNNVGEISVSTRLTVLRE 101 (212)
T ss_dssp EEEEEETTEEEEEEEEEEEECG
T ss_pred EEEEEcCCCcEEEEEEEEEecc
Confidence 9999999988877777777543
No 268
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.28 E-value=2.7e-11 Score=77.55 Aligned_cols=84 Identities=19% Similarity=0.341 Sum_probs=64.5
Q ss_pred ccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCC
Q psy16426 61 QNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLG 140 (194)
Q Consensus 61 ~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g 140 (194)
.+....+.+|+.+.|.|.+.+ .|.+.|++ ++..+....++.. . . ..|.|.++..+|.|.|+|.+.|..|
T Consensus 7 ~p~~~~v~~G~~~~l~C~~~~--~p~v~W~k-~g~~~~~~~~~~~--~-~-----~~L~i~~~~~~D~G~Y~C~a~n~~g 75 (95)
T 4hwu_A 7 QPEAYVVAPGESLELQCMLKD--AAVISWTK-DGVHLGPNNRTVL--I-G-----EYLQIKGATPRDSGLYACTAARTVD 75 (95)
T ss_dssp -CEEEEECTTSCEEEECCCCT--TCEEEEEE-TTEEECCCSSEEE--E-T-----TEEEECSCCGGGCEEEEEEEECSSC
T ss_pred CCCcEEECCCCEEEEEEEeCC--CCEEEEEE-CCEECCCCceEEE--e-C-----CEEEECcCCcccCEEEEEEEccCCC
Confidence 345566889999999999886 57899999 5555544444321 1 1 3899999999999999999999999
Q ss_pred ceEEEEEEEcccCCC
Q psy16426 141 DTDGSIKLYGKKKKK 155 (194)
Q Consensus 141 ~~~~~~~l~v~~~p~ 155 (194)
.....+.|.|.+.+.
T Consensus 76 ~~~~~~~l~V~~~~~ 90 (95)
T 4hwu_A 76 SETWIFMVNVTDAAE 90 (95)
T ss_dssp EEEEEEEEEECCC--
T ss_pred cEEEEEEEEEeCCcc
Confidence 888888898876643
No 269
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.28 E-value=4.7e-12 Score=82.12 Aligned_cols=90 Identities=19% Similarity=0.290 Sum_probs=63.5
Q ss_pred eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCC----ceeEEecCCceeEEEEEEEeecCCCCCe
Q psy16426 54 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGS----KYEPILLDNAYKIHMKLTIKAVTKQDFG 129 (194)
Q Consensus 54 ~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~----~~~~~~~~~~~~~~~~L~i~~~~~~d~g 129 (194)
.+|.|........+.+|+.+.|.|.+.+.+ +.+.|++ ++..+.... ++... .++. ...|.|.++..+|.|
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~-~~v~W~k-~g~~i~~~~~~~~~~~~~-~~~~---~~~L~I~~~~~~D~G 80 (101)
T 2edk_A 7 GPVLIVTPLEDQQVFVGDRVEMAVEVSEEG-AQVMWMK-NGVELTREDSFKARYRFK-KDGK---RHILIFSDVVQEDRG 80 (101)
T ss_dssp CCCCEEECCCCEEEESSCCCBCCEEESCSS-CCCEEEE-SSCBCCCSCCSSCCCEEE-ECSS---EEEEECSSCCGGGCS
T ss_pred CCCEEEecCCceEEcCCCCEEEEEEEeCCC-CEEEEEE-CCEECCCCCCcceeEEEE-ECCC---EEEEEECCCChhhCE
Confidence 356666666778889999999999999888 8999999 444443333 33322 2221 458999999999999
Q ss_pred EEEEEEEcCCCceEEEEEEEcccC
Q psy16426 130 AYKCVSKNSLGDTDGSIKLYGKKK 153 (194)
Q Consensus 130 ~y~C~a~n~~g~~~~~~~l~v~~~ 153 (194)
.|+|.+.|. .....|.|...
T Consensus 81 ~Y~C~a~n~----~~~~~l~V~~~ 100 (101)
T 2edk_A 81 RYQVITNGG----QCEAELIVEEK 100 (101)
T ss_dssp BEEEECSSC----EECCBEEEECC
T ss_pred EEEEEEcCC----cEEEEEEEeCC
Confidence 999999872 33344555443
No 270
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.28 E-value=2.5e-11 Score=89.73 Aligned_cols=74 Identities=15% Similarity=0.280 Sum_probs=49.7
Q ss_pred eeCCeEEEEEEeecc-CCC-ccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceE
Q psy16426 68 MEGDQMTLECHSEAY-PKS-INYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTD 143 (194)
Q Consensus 68 ~~g~~~~l~C~~~~~-p~p-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~ 143 (194)
..|+.+.|.|.+.+. |.| .+.|+++ +..............++.+...+.|.|..+..+| |.|+|.|.|..+...
T Consensus 141 ~~g~~v~L~C~~~g~~P~p~~v~W~~~-~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~ 216 (225)
T 1op3_H 141 TSGGTAALGCLVKDYFPEPVTVSWNSG-ALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK 216 (225)
T ss_dssp CCCCEEEEEEEEEEEBSSCCEEECCTT-SCCTTCEECCCEECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGGTEE
T ss_pred cCCCcEEEEEEEEeEECCCeEEEEecC-CCcCCeEecCceeCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCCCcc
Confidence 368899999999886 666 8999984 4321100000111233445566789999998888 999999999765443
No 271
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.28 E-value=1.7e-11 Score=79.64 Aligned_cols=91 Identities=23% Similarity=0.388 Sum_probs=66.2
Q ss_pred CCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEE
Q psy16426 55 PPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCV 134 (194)
Q Consensus 55 ~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~ 134 (194)
+|.+...+....+.+|+.+.|.|.+.+.|.+ +.|++ ++..+....++.... +.. ..+|.|.+++.+|.|.|+|.
T Consensus 8 pp~~~~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k-~~~~l~~~~~~~~~~-~~~---~~~L~I~~v~~~D~G~Y~C~ 81 (103)
T 2e7b_A 8 PVRFQEALKDLEVLEGGAATLRCVLSSVAAP-VKWCY-GNNVLRPGDKYSLRQ-EGA---MLELVVRNLRPQDSGRYSCS 81 (103)
T ss_dssp CCCCTBCCCCEEEESSSCEEEEEECSSCCCS-CEEEE-SSSBCCCSSSEEEEE-CSS---EEEEEECSCCTTTCCCEEEE
T ss_pred CCEEEecCccEEEECCCcEEEEEEEeCCCCC-eEEEE-CCEECCCCCcEEEEE-cCC---EEEEEEccCCcccCEEEEEE
Confidence 5556555667788999999999999998888 99999 554444444554332 221 45899999999999999998
Q ss_pred EEcCCCceEEEEEEEcccCCC
Q psy16426 135 SKNSLGDTDGSIKLYGKKKKK 155 (194)
Q Consensus 135 a~n~~g~~~~~~~l~v~~~p~ 155 (194)
.|.....+.|.|...|.
T Consensus 82 ----~g~~~~~~~l~V~~~p~ 98 (103)
T 2e7b_A 82 ----FGDQTTSATLTVTALPS 98 (103)
T ss_dssp ----CSSCBCCBCEEEECCCC
T ss_pred ----ECCcEEEEEEEEEeccc
Confidence 45555556666666654
No 272
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=99.27 E-value=2.6e-11 Score=82.97 Aligned_cols=91 Identities=13% Similarity=0.124 Sum_probs=64.7
Q ss_pred EeeCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeC---------CCceeEEecCCceeEEEEEEEee
Q psy16426 52 AQVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQ---------GSKYEPILLDNAYKIHMKLTIKA 122 (194)
Q Consensus 52 v~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~L~i~~ 122 (194)
...+|.+...+....+.+|+.+.|.|.+.+.|.|.+.|++++..+... ..++..... ......++|.|.+
T Consensus 18 ~~~pP~~~~~p~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~L~I~~ 96 (137)
T 3qr2_A 18 GSHMAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDICSQLWDGARLDRVHIHAT-YHQHAASTISIDT 96 (137)
T ss_dssp ---CCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEEEESSTTCCCEECCTTHHHHTEEEEEE-ESSSEEEEEEECS
T ss_pred CCCCCeEEcCCCCEEEeCCCCEEEEEEEeeecCCeEEEEECCCCccccceeecccCcccceEEecc-cccccceEEEECC
Confidence 446888888888888999999999999999999999999843322111 011111100 0011356999999
Q ss_pred cCCCCCeEEEEEEEcCCCceE
Q psy16426 123 VTKQDFGAYKCVSKNSLGDTD 143 (194)
Q Consensus 123 ~~~~d~g~y~C~a~n~~g~~~ 143 (194)
+..+|.|.|+|.|.|..|...
T Consensus 97 v~~~D~G~Y~C~a~N~~G~~~ 117 (137)
T 3qr2_A 97 LVEEDTGTYECRASNDPDRNH 117 (137)
T ss_dssp CCGGGCEEEEEEEECCTTSSS
T ss_pred CCcccCEEEEEEEEecCCccc
Confidence 999999999999999998763
No 273
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.27 E-value=7e-11 Score=96.62 Aligned_cols=80 Identities=14% Similarity=0.097 Sum_probs=53.8
Q ss_pred EeeCCeEEEEEEeeccCC---CccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceE
Q psy16426 67 AMEGDQMTLECHSEAYPK---SINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTD 143 (194)
Q Consensus 67 ~~~g~~~~l~C~~~~~p~---p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~ 143 (194)
+.+|+.+.|.|.+.+.++ +.+.| . ++..............++.+...+.|.|.++..+|.|.|+|.|.|..+...
T Consensus 259 ~~~G~~v~L~C~~~g~~p~~~~~i~W-~-~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~~~~~ 336 (475)
T 1iga_A 259 LLLGSEANLTCTLTGLRDASGVTFTW-T-PSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYPESKTP 336 (475)
T ss_pred hccCCceEEEEEEEcccCCCceEEEE-C-CCCcCCccccCceECCCCCEEEEEEEEEchHHhccCCcEEEEEEcCCCCCc
Confidence 467999999999998754 57889 4 443322111111111123344567899999999999999999999988764
Q ss_pred EEEEE
Q psy16426 144 GSIKL 148 (194)
Q Consensus 144 ~~~~l 148 (194)
....|
T Consensus 337 ~~~~v 341 (475)
T 1iga_A 337 LTATL 341 (475)
T ss_pred eEEEe
Confidence 44444
No 274
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.27 E-value=6.8e-11 Score=77.99 Aligned_cols=81 Identities=22% Similarity=0.343 Sum_probs=59.6
Q ss_pred eEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEE
Q psy16426 65 VGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDG 144 (194)
Q Consensus 65 ~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~ 144 (194)
..+.+|+.+.|.|.+. .|.+.+.|++ ++..+....++.... +.. ...|.|.++..+|.|.|+|.+.| ...
T Consensus 23 ~~~~~G~~v~L~C~~~-~p~~~v~W~k-~g~~~~~~~~~~~~~-~~~---~~~L~I~~v~~~D~G~Y~C~a~n----~~~ 92 (113)
T 2cpc_A 23 VAAVRLERVVLTCELC-RPWAEVRWTK-DGEEVVESPALLLQK-EDT---VRRLVLPAVQLEDSGEYLCEIDD----ESA 92 (113)
T ss_dssp EEEETTCCEEEEEEES-CTTCCCEEEE-TTEECCCBTTBEEEE-CSS---EEEEEESSCCTTTCEEEEEESSS----CEE
T ss_pred EEEEcCCeEEEEEEec-CCCCeEEEEE-CCEECccCCCEEEEE-CCC---EEEEEECCCCcccCEEEEEEEec----CcE
Confidence 5677899999999985 7888999999 565554444443222 221 35899999999999999999998 445
Q ss_pred EEEEEcccCCC
Q psy16426 145 SIKLYGKKKKK 155 (194)
Q Consensus 145 ~~~l~v~~~p~ 155 (194)
.+.|.|...|.
T Consensus 93 ~~~l~V~~~p~ 103 (113)
T 2cpc_A 93 SFTVTVTEPPV 103 (113)
T ss_dssp EEEEEEECCCC
T ss_pred EEEEEEecCCc
Confidence 66676666553
No 275
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.27 E-value=1.4e-11 Score=81.88 Aligned_cols=91 Identities=19% Similarity=0.151 Sum_probs=66.4
Q ss_pred eEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEE
Q psy16426 57 MIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSK 136 (194)
Q Consensus 57 ~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~ 136 (194)
.+........+.+|+.+.|.|.+.+.|.|.+.|++ ++..+....++.....+.. ..+|.|.++..+|.|.|+|.+
T Consensus 15 ~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k-~g~~l~~~~~~~~~~~~~~---~~~L~I~~v~~~D~G~Y~C~~- 89 (115)
T 2cr6_A 15 HIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFL-DKTPLHANELNEIDAQPGG---YHVLTLRQLALKDSGTIYFEA- 89 (115)
T ss_dssp EEEECCCEEEEETTSCEECCCEEESTTCCSCEEEE-SSCEECCSSSCCBCCBTTT---BCCBEECSCCTTTCEEEEEEE-
T ss_pred eEeccCccEEEeCCCcEEEEEEEcCCCCCccEEEE-CCEECCCCCcEEEEEcCCC---EEEEEEcCCChhhCEEEEEEE-
Confidence 56666677888999999999999999999999999 5554444434332211111 348999999999999999993
Q ss_pred cCCCceEEEEEEEcccCCC
Q psy16426 137 NSLGDTDGSIKLYGKKKKK 155 (194)
Q Consensus 137 n~~g~~~~~~~l~v~~~p~ 155 (194)
|.......|.|...|.
T Consensus 90 ---g~~~~~~~L~V~~~p~ 105 (115)
T 2cr6_A 90 ---GDQRASAALRVTEKPS 105 (115)
T ss_dssp ---TTEECCEEEEEECCSS
T ss_pred ---CCeeEEEEEEEECCCc
Confidence 5556667777776654
No 276
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.26 E-value=3e-11 Score=79.01 Aligned_cols=96 Identities=19% Similarity=0.302 Sum_probs=66.3
Q ss_pred eCCeEEeccceeEEeeCCeEEEEEEeeccC--CCccEEEecCcEEeeCCCceeEEecC----CceeEEEEEEEeecCCCC
Q psy16426 54 VPPMIWIQNQLVGAMEGDQMTLECHSEAYP--KSINYWTKENGEIIAQGSKYEPILLD----NAYKIHMKLTIKAVTKQD 127 (194)
Q Consensus 54 ~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p--~p~v~W~~~~~~~~~~~~~~~~~~~~----~~~~~~~~L~i~~~~~~d 127 (194)
.+|.+...+....+.+|+.+.|.|.+.+.+ .+.+.|++ ++............... ......++|.|.++..+|
T Consensus 9 ~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~i~W~k-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 87 (112)
T 3so5_A 9 PXPQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXX-DNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFTS 87 (112)
T ss_dssp CSCEEEECCCCEEECTTCCEEEEEEEEESCCCCCEEEEEE-TTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCGGG
T ss_pred CCCeEEeCCCCcEEECCCCEEEEEEEecCCCCCEEEEEcc-CCcccccccccceeeeeccCCCccccceEEEEecccccc
Confidence 466777677777888999999999998654 57889999 55444332111101111 011224699999999999
Q ss_pred CeEEEEEEEcCCCce-EEEEEEEc
Q psy16426 128 FGAYKCVSKNSLGDT-DGSIKLYG 150 (194)
Q Consensus 128 ~g~y~C~a~n~~g~~-~~~~~l~v 150 (194)
.|.|+|.+.|..|.. ...+.|.|
T Consensus 88 ~G~Y~C~a~n~~g~~~s~~~~l~V 111 (112)
T 3so5_A 88 EGXYQCVISNHFGSSYSVXAXLTI 111 (112)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEE
T ss_pred CCeEEEEEEeCCCcEEEeEEEEEe
Confidence 999999999999874 35566654
No 277
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.25 E-value=3.1e-11 Score=91.42 Aligned_cols=73 Identities=21% Similarity=0.319 Sum_probs=49.5
Q ss_pred eCCeEEEEEEeeccCCC--ccEEEecCcEEeeCCCceeE-------EecCCceeEEEEEEEeecCCCC-CeEEEEEEEcC
Q psy16426 69 EGDQMTLECHSEAYPKS--INYWTKENGEIIAQGSKYEP-------ILLDNAYKIHMKLTIKAVTKQD-FGAYKCVSKNS 138 (194)
Q Consensus 69 ~g~~~~l~C~~~~~p~p--~v~W~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~L~i~~~~~~d-~g~y~C~a~n~ 138 (194)
.|+.+.|.|.+.+.+++ .+.|++ ++..+........ ...++.+...+.|.|......| .|.|+|.+.|.
T Consensus 160 ~g~~v~L~C~~~g~~p~~~~v~W~~-~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~YtC~v~~~ 238 (268)
T 3pl6_D 160 HTQKATLVCLATGFYPDHVELSWWV-NGKEVHSGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFY 238 (268)
T ss_dssp HHSEEEEEEEEEEEBSSCEEEEEEE-SSSEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEEC
T ss_pred CCCceEEEEEECcccCCCeEEEEEE-CCEECCCCeEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEEEEEEcC
Confidence 47899999999986654 788999 5544433211100 0023445556788888887777 99999999987
Q ss_pred CCce
Q psy16426 139 LGDT 142 (194)
Q Consensus 139 ~g~~ 142 (194)
....
T Consensus 239 ~l~~ 242 (268)
T 3pl6_D 239 GLSE 242 (268)
T ss_dssp CBCT
T ss_pred CCCC
Confidence 6543
No 278
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.25 E-value=4.8e-11 Score=90.48 Aligned_cols=133 Identities=18% Similarity=0.328 Sum_probs=83.7
Q ss_pred cCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecC--c----------------------------------eEE
Q psy16426 8 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKEN--G----------------------------------EII 51 (194)
Q Consensus 8 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~--~----------------------------------~l~ 51 (194)
..+.+...+.++.+.+|++++|.|.+.+ +.+.+.||+.. . .|.
T Consensus 26 ~~~~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~ 104 (270)
T 3qib_D 26 GGMKVIQTPRYLVKGQGQKAKMRCIPEK-GHPVVFWYQQNKNNEFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLE 104 (270)
T ss_dssp --CCCEEECSEEEEETTSCEEEEEECCT-TCCEEEEEEECTTCCEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEE
T ss_pred cceeEEeCCCeEEEcCCCCEEEEEEecC-CCceEEEEEECCCCCcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEE
Confidence 4467778888899999999999999866 67799999811 0 111
Q ss_pred ---------------Eee-------------------------CCeEEec-cceeEEeeCCeEEEEEEeec-cCCC-ccE
Q psy16426 52 ---------------AQV-------------------------PPMIWIQ-NQLVGAMEGDQMTLECHSEA-YPKS-INY 88 (194)
Q Consensus 52 ---------------v~~-------------------------~p~i~~~-~~~~~~~~g~~~~l~C~~~~-~p~p-~v~ 88 (194)
+.. +|.+... +....+..|+.+.|.|.+.+ .|.+ .+.
T Consensus 105 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~ 184 (270)
T 3qib_D 105 IQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELS 184 (270)
T ss_dssp ESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEE
T ss_pred ECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEccccccccCCceEEECCCccccccCCceEEEEEecceeCCCeEEE
Confidence 110 1111110 00111124889999999988 5555 688
Q ss_pred EEecCcEEeeCCCceeE-------EecCCceeEEEEEEEeecCCCC-CeEEEEEEEcCCCce
Q psy16426 89 WTKENGEIIAQGSKYEP-------ILLDNAYKIHMKLTIKAVTKQD-FGAYKCVSKNSLGDT 142 (194)
Q Consensus 89 W~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~L~i~~~~~~d-~g~y~C~a~n~~g~~ 142 (194)
|++ ++..+........ ...++.+...+.|.|.....+| .|.|+|.+.|.....
T Consensus 185 W~k-~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~l~~ 245 (270)
T 3qib_D 185 WWV-NGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSE 245 (270)
T ss_dssp EEE-TTEEECTTEEECSSCEESCTTSSSCCEEEEEEEEEEHHHHHSTTCEEEEEEEECCBCT
T ss_pred EEE-CCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEecCCCC
Confidence 999 5655543321110 0023445556788888887777 899999999876543
No 279
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.25 E-value=5.1e-11 Score=91.37 Aligned_cols=98 Identities=26% Similarity=0.341 Sum_probs=75.4
Q ss_pred eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEE
Q psy16426 54 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKC 133 (194)
Q Consensus 54 ~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C 133 (194)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.....++.....++. .+.|.|.+++.+|.|.|+|
T Consensus 3 ~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~---~~~L~i~~v~~~d~G~Y~C 79 (305)
T 2nzi_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGG---YHQLIIASVTDDDATVYQV 79 (305)
T ss_dssp CCCEEEECCCCEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTT---EEEEEESSCCGGGCSEEEE
T ss_pred CCCeeeecccceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCC---EEEEEEccCChhhCeEEEE
Confidence 4677877777888899999999999999999999999944333333334433222222 4589999999999999999
Q ss_pred EEEcCCCceEEEEEEEcccCC
Q psy16426 134 VSKNSLGDTDGSIKLYGKKKK 154 (194)
Q Consensus 134 ~a~n~~g~~~~~~~l~v~~~p 154 (194)
.+.|..|.....+.|.|...|
T Consensus 80 ~a~n~~g~~~~~~~l~V~~~p 100 (305)
T 2nzi_A 80 RATNQGGSVSGTASLEVEVPA 100 (305)
T ss_dssp EEEETTEEEEEEEEEEECEEE
T ss_pred EEEcCCCCccceEEEEEecCC
Confidence 999999988778888776544
No 280
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=99.24 E-value=1.3e-10 Score=80.27 Aligned_cols=95 Identities=13% Similarity=0.157 Sum_probs=67.6
Q ss_pred eccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEee-------CCCceeEEecCCceeEEEEEEEeecCCCCCeEEE
Q psy16426 60 IQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIA-------QGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYK 132 (194)
Q Consensus 60 ~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~ 132 (194)
..+..+.+.+|+++.|.|.+.+.+.+.+.|+..+..... ...++....... ...+|.|.+++.+|.|.|+
T Consensus 43 ~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~~~~~~~i~~~~~~~~~~~r~~~~~~~~---~~~~L~I~~v~~~DsG~Y~ 119 (145)
T 1z9m_A 43 PWTSDETVVAGGTVVLKCQVKDHEDSSLQWSNPAQQTLYFGEKRALRDNRIQLVTSTP---HELSISISNVALADEGEYT 119 (145)
T ss_dssp CBCCCEEEETTSCEEEEEECSCCTTCCEEEECTTCCEEEETTEECSCCTTEEEEEECS---SEEEEEECSCCGGGCEEEE
T ss_pred cCCceEEEEcCCCEEEEEEEcCCCCcEEEEECCCCcEEEECCceecccCCEEEecCCC---CeEEEEECCCChhhCEEEE
Confidence 345567788999999999999988889999953222211 112232111111 1468999999999999999
Q ss_pred EEEEcCCCceEEEEEEEcccCCCCCh
Q psy16426 133 CVSKNSLGDTDGSIKLYGKKKKKKKK 158 (194)
Q Consensus 133 C~a~n~~g~~~~~~~l~v~~~p~~p~ 158 (194)
|.+.|. +.....+.|.|...|..|.
T Consensus 120 C~~~n~-~~~~~~~~L~V~~~P~~P~ 144 (145)
T 1z9m_A 120 CSIFTM-PVRTAKSLVTVLGIPQKPI 144 (145)
T ss_dssp EEECSS-SCEEEEEEEEEECCCC---
T ss_pred EEEEcC-CCceEEEEEEEEeCCCCCc
Confidence 999999 8888889999888776653
No 281
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.24 E-value=3.1e-11 Score=88.46 Aligned_cols=78 Identities=13% Similarity=0.140 Sum_probs=41.8
Q ss_pred EeeCCeEEEEEEeeccCCC--ccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEE
Q psy16426 67 AMEGDQMTLECHSEAYPKS--INYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDG 144 (194)
Q Consensus 67 ~~~g~~~~l~C~~~~~p~p--~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~ 144 (194)
+..|+.+.|.|.+.+.+++ .+.|+++ +..............++.+...+.|. +...| |.|+|.+.|..+....
T Consensus 132 ~~~g~~v~l~C~~~~~~p~~~~v~W~~~-g~~~~~~~~~~~~~~~g~~~~~s~l~---v~~~d-g~ytC~v~~~~~~~~~ 206 (215)
T 3nl4_H 132 DTPSSTVTLGCLVKGYLPEPVTVTWNSG-TLTNGVRTFPSVRQSSGLYSLSSVVS---VTSSS-QPVTCNVAHPATNTKV 206 (215)
T ss_dssp CCC--CEEEEEEEEEEBSSCCEEEEGGG-TBCTTEEECCCEECTTSCEEEEEEEE---ECC----CCEEEEEEGGGTEEE
T ss_pred ccCCCcEEEEEEEeeeeCCCeEEEEeeC-CEECCeEecCceECCCCCEEEEEEEE---EeccC-CEEEEEEEeCCCCcce
Confidence 3468899999999986544 3569884 43211110111112233333333344 44556 9999999999887766
Q ss_pred EEEEE
Q psy16426 145 SIKLY 149 (194)
Q Consensus 145 ~~~l~ 149 (194)
...|.
T Consensus 207 ~~~l~ 211 (215)
T 3nl4_H 207 DKTVA 211 (215)
T ss_dssp EEECC
T ss_pred EEecC
Confidence 55554
No 282
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.24 E-value=5.8e-11 Score=84.45 Aligned_cols=114 Identities=12% Similarity=0.168 Sum_probs=71.2
Q ss_pred CeeeeeCCCcEEEEeeeeccCCceeEEEecCceEE----------------------------------------Eee--
Q psy16426 17 QLVGAMEGDQMTLECHSEAYPKSINYWTKENGEII----------------------------------------AQV-- 54 (194)
Q Consensus 17 ~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~----------------------------------------v~~-- 54 (194)
..+.+.+|++|+|.|.+.+ |.+.|.|++++..+. ...
T Consensus 3 ~~v~~~~G~~VtL~c~~~~-~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n 81 (171)
T 1ccz_A 3 QQIYGVVYGNVTFHVPSNV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPN 81 (171)
T ss_dssp EEEEEETTCCEEECCCCSS-CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEEEECTT
T ss_pred cEEEEEcCCCEEEcCCCCC-CcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCceEEEEEeC
Confidence 3467889999999999854 788999998764211 000
Q ss_pred CC-----eEEec----cceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCC
Q psy16426 55 PP-----MIWIQ----NQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTK 125 (194)
Q Consensus 55 ~p-----~i~~~----~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~ 125 (194)
.. .+.+. ...+. .......|.|.+.+.|.|.+.|++ ++..+..... ..|.+. ..
T Consensus 82 ~~~~~~~~L~V~~~~~~p~i~-~~~~~~~L~C~~~~~p~p~i~W~~-~~~~l~~~~~-------------~~l~~~--~~ 144 (171)
T 1ccz_A 82 ITDTMKFFLYVLEMVSKPMIY-WECSNATLTCEVLEGTDVELKLYQ-GKEHLRSLRQ-------------KTMSYQ--WT 144 (171)
T ss_dssp CCSCEEEEEEEECCCCCCEEE-EETTTTEEEEECSSCSSCEEEEEE-TTEEEEEESS-------------SEEEEE--CS
T ss_pred CCCcEEEEEEEECcCCCCEEE-EecCCcEEEEEeCCCCCcEEEEEE-CCEECcCCcc-------------eEEEEe--cc
Confidence 00 00000 00011 111223799999998899999998 5554432111 133333 36
Q ss_pred CCCeEEEEEEEcCCCceEEEEEE
Q psy16426 126 QDFGAYKCVSKNSLGDTDGSIKL 148 (194)
Q Consensus 126 ~d~g~y~C~a~n~~g~~~~~~~l 148 (194)
.|.|.|+|.|.|..+.......|
T Consensus 145 ~~~g~Y~C~a~N~~~~~~~~~~l 167 (171)
T 1ccz_A 145 NLRAPFKCKAVNRVSQESEMEVV 167 (171)
T ss_dssp CCSSCEEEEEEETTEEEEEEECC
T ss_pred CCCceEEEEEEcccCcccceeEE
Confidence 78899999999999987776554
No 283
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.23 E-value=1.9e-11 Score=99.45 Aligned_cols=135 Identities=14% Similarity=0.196 Sum_probs=80.1
Q ss_pred CCeEEEcCCeeeeeCCCcEEEEeeeecc-CC-ceeEEEecCce---------------------EE--------------
Q psy16426 9 PPMIWIQNQLVGAMEGDQMTLECHSEAY-PK-SINYWTKENGE---------------------II-------------- 51 (194)
Q Consensus 9 ~P~~~~~~~~~~v~~G~~v~L~C~~~g~-p~-~~v~W~k~~~~---------------------l~-------------- 51 (194)
+|.+...+....+.+|++++|.|.+.|. |. +.|.|++++.. +.
T Consensus 132 ~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~dG~Y~C~ 211 (457)
T 1hzh_H 132 GPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICN 211 (457)
T ss_dssp CCEEEEECCCSCCCTTCCEEEEEEEESBBSCCCEEEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGTSCCEEE
T ss_pred CCeEEecCccccccCCCcEEEEEEEeEEeCCCeEEEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCCceEEEE
Confidence 6776655545567899999999999986 64 79999998732 00
Q ss_pred Ee--------------------------------eCCeE-EeccceeE-EeeCCeEEEEEEeeccCCC----ccEEEecC
Q psy16426 52 AQ--------------------------------VPPMI-WIQNQLVG-AMEGDQMTLECHSEAYPKS----INYWTKEN 93 (194)
Q Consensus 52 v~--------------------------------~~p~i-~~~~~~~~-~~~g~~~~l~C~~~~~p~p----~v~W~~~~ 93 (194)
+. .+|.+ ...+.... +.+|+.+.|.|.+.+.+++ .+.|++ +
T Consensus 212 a~n~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k-~ 290 (457)
T 1hzh_H 212 VNHKPSNTKVDKKAEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYV-D 290 (457)
T ss_dssp EEEGGGTEEEEEECCCCCSCSSCSCCSCCCCCCSSSCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEE-T
T ss_pred EEeCCCCcceeEEecccCCCcccccCCCCCccccCCceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEe-C
Confidence 00 02222 11111111 3469999999999987653 889999 4
Q ss_pred cEEeeCCCcee-EEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEE
Q psy16426 94 GEIIAQGSKYE-PILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDG 144 (194)
Q Consensus 94 ~~~~~~~~~~~-~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~ 144 (194)
+..+....... ....++.+...+.|.|......|.|.|+|.|.|..+....
T Consensus 291 ~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~~~~~ 342 (457)
T 1hzh_H 291 GVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPI 342 (457)
T ss_dssp TEEECCCEEEEEEECTTSCEEEEEEECCCHHHHHHTCCEEEEEECTTSSSCE
T ss_pred CccccccccccceecCCCcEEEEEEEEECHHHccCCCcEEEEEeCCCCCCcc
Confidence 54433221111 1122233333344444333334499999999987655433
No 284
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.23 E-value=9.5e-11 Score=76.68 Aligned_cols=91 Identities=22% Similarity=0.308 Sum_probs=64.7
Q ss_pred eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEE
Q psy16426 54 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKC 133 (194)
Q Consensus 54 ~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C 133 (194)
.+|.|...+....+.+|+.+.|.|.+.+. |.+.|++ ++..+....++....... ...|.|.+++.+|.|.|+|
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k-~~~~~~~~~~~~~~~~~~----~~~L~I~~v~~~D~G~Y~C 79 (108)
T 2dm7_A 7 GPARFTQDLKTKEASEGATATLQCELSKV--APVEWKK-GPETLRDGGRYSLKQDGT----RCELQIHDLSVADAGEYSC 79 (108)
T ss_dssp CCCCBCSCCBCCEEETTSCEEEEEEBSSS--CCCEEES-SSSBCCSSSSCEEEEETT----EEEEEESSCCTTTCSEEEE
T ss_pred CCCeeeecCCcEEEeCCCcEEEEEEeCCC--CeeEEEE-CCEECCCCCCEEEEecCC----EEEEEECCCCcccCEEEEE
Confidence 35666656677788999999999998764 7899999 444444444444322221 4579999999999999999
Q ss_pred EEEcCCCceEEEEEEEcccCCC
Q psy16426 134 VSKNSLGDTDGSIKLYGKKKKK 155 (194)
Q Consensus 134 ~a~n~~g~~~~~~~l~v~~~p~ 155 (194)
.+.| ......|.|...|.
T Consensus 80 ~a~n----~~~~~~l~V~~~p~ 97 (108)
T 2dm7_A 80 MCGQ----ERTSATLTVRALPA 97 (108)
T ss_dssp EETT----EEEEEECEEECCCS
T ss_pred EEcC----CEEEEEEEEecCCH
Confidence 9954 45566666665544
No 285
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.22 E-value=6.8e-11 Score=84.73 Aligned_cols=94 Identities=29% Similarity=0.417 Sum_probs=71.5
Q ss_pred eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCC--ceeEEecCCceeEEEEEEEeecCCCCCeEE
Q psy16426 54 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGS--KYEPILLDNAYKIHMKLTIKAVTKQDFGAY 131 (194)
Q Consensus 54 ~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~--~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y 131 (194)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|+++ +....... .+.....+. ...|.|.++...|.|.|
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~----~~~L~i~~~~~~d~G~Y 78 (194)
T 2a38_A 4 QAPTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRD-GQVISTSTLPGVQISFSDG----RAKLTIPAVTKANSGRY 78 (194)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEES-SSBCCTTTSTTCEEEEETT----EEEEEESSCCGGGCEEE
T ss_pred CCCeEEccCCceEEECCCEEEEEEEEEecCCCEEEEEEC-CEEcccccCCceEEEeCCC----EEEEEECCCCcccCEEE
Confidence 356677677778889999999999999999899999994 44333321 222222222 46899999999999999
Q ss_pred EEEEEcCCCceEEEEEEEccc
Q psy16426 132 KCVSKNSLGDTDGSIKLYGKK 152 (194)
Q Consensus 132 ~C~a~n~~g~~~~~~~l~v~~ 152 (194)
+|.+.|..|.....+.|.|..
T Consensus 79 ~C~~~n~~~~~~~~~~l~v~~ 99 (194)
T 2a38_A 79 SLKATNGSGQATSTAELLVKA 99 (194)
T ss_dssp EEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEcCCceEeEEEEEEEcc
Confidence 999999998877777777654
No 286
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.22 E-value=3.8e-10 Score=84.32 Aligned_cols=80 Identities=14% Similarity=0.211 Sum_probs=51.9
Q ss_pred eCCeEEEEEEeecc-CC-CccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEEE
Q psy16426 69 EGDQMTLECHSEAY-PK-SINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSI 146 (194)
Q Consensus 69 ~g~~~~l~C~~~~~-p~-p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~ 146 (194)
.|+.+.|.|.+.+. |. +.++|++++...+...........++.+...+.|.|..... + |.|+|.+.|..+......
T Consensus 146 ~g~~v~L~C~~~g~~P~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n~~~~~~~~~ 223 (242)
T 1hxm_B 146 LQKAGTYLCLLEKFFPDVIKIHWEEKKSNTILGSQEGNTMKTNDTYMKFSWLTVPEKSL-D-KEHRCIVRHENNKNGVDQ 223 (242)
T ss_dssp SSSCEEEEEEEEEESSCCEEEEEEESSSCCCCCCEECCCEECSSSEEEEEEEEECTGGG-G-SCEEEEEEETTSGGGSCE
T ss_pred cCCCceEEEEEeeEECCCeEEEEEcCCCEeecCccccceecCCCcEEEEEEEEEccccC-C-CEEEEEEEeCCCCCCcee
Confidence 37889999999886 53 68999995442332211111122344556667899887764 4 999999999988765444
Q ss_pred EEEc
Q psy16426 147 KLYG 150 (194)
Q Consensus 147 ~l~v 150 (194)
.+.+
T Consensus 224 ~~~~ 227 (242)
T 1hxm_B 224 EIIF 227 (242)
T ss_dssp EEEE
T ss_pred Eeec
Confidence 4433
No 287
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.21 E-value=1.4e-10 Score=88.55 Aligned_cols=135 Identities=18% Similarity=0.309 Sum_probs=87.1
Q ss_pred cCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCc-------------------------------------eE
Q psy16426 8 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENG-------------------------------------EI 50 (194)
Q Consensus 8 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~-------------------------------------~l 50 (194)
..+.+...+.++.+.+|++++|.|.+.+.+.+.+.||+++. .|
T Consensus 23 ~~~~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL 102 (279)
T 2wbj_D 23 GGAVVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTL 102 (279)
T ss_dssp CCCCEEEECSEEEEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEE
T ss_pred ccceEEeCCCeEEecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEE
Confidence 46778888899999999999999999888888999998530 01
Q ss_pred E---------------EeeC-----------C--eEEec-------cceeEE--------eeCCeEEEEEEeeccCC--C
Q psy16426 51 I---------------AQVP-----------P--MIWIQ-------NQLVGA--------MEGDQMTLECHSEAYPK--S 85 (194)
Q Consensus 51 ~---------------v~~~-----------p--~i~~~-------~~~~~~--------~~g~~~~l~C~~~~~p~--p 85 (194)
. +... . .+.+. +..+.+ ..|+.+.|.|.+.+.++ +
T Consensus 103 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~ 182 (279)
T 2wbj_D 103 TVTSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHV 182 (279)
T ss_dssp EESSCCGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBSSCE
T ss_pred EEccCCccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeEcCCCc
Confidence 1 2110 0 01111 111211 14788999999998744 5
Q ss_pred ccEEEecCcEEeeCCCcee--EE-----ecCCceeEEEEEEEeecCCCC-CeEEEEEEEcCCCceE
Q psy16426 86 INYWTKENGEIIAQGSKYE--PI-----LLDNAYKIHMKLTIKAVTKQD-FGAYKCVSKNSLGDTD 143 (194)
Q Consensus 86 ~v~W~~~~~~~~~~~~~~~--~~-----~~~~~~~~~~~L~i~~~~~~d-~g~y~C~a~n~~g~~~ 143 (194)
.+.|++ ++..+....... .. ..+..+...+.|.|......| .+.|+|.+.|......
T Consensus 183 ~v~W~k-~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~v~n~~~~~~ 247 (279)
T 2wbj_D 183 ELSWWV-NGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 247 (279)
T ss_dssp EEEEEE-TTEECCTTEEECSSCEESSTTSTTCCEEEEEEEECCSTTTTCTTCEEEEEEEECCBCTT
T ss_pred EEEEEE-CCEECCCCcccccccccccccCCCCcEEEEEEEEEChHHhccCCCEEEEEEEeCCCCCC
Confidence 899999 555543321110 00 133445566778888777654 6789999999765543
No 288
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.20 E-value=1.8e-11 Score=78.55 Aligned_cols=83 Identities=20% Similarity=0.322 Sum_probs=61.9
Q ss_pred CCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEE
Q psy16426 55 PPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCV 134 (194)
Q Consensus 55 ~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~ 134 (194)
+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++ ++....... ...|.|.++..+|.|.|+|.
T Consensus 10 ~~~i~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~k-~~~~~~~~~-------------~~~L~i~~v~~~d~G~Y~C~ 75 (96)
T 2ens_A 10 EVQLVVEPEGGAVAPGGTVTLTCEVPAQPSPQIHWMK-DGVPLPLPP-------------SPVLILPEIGPQDQGTYSCV 75 (96)
T ss_dssp SCCCEEESTTSEECTTCEEEEECCCSSCSSCCCCCEE-SSSBCSSCC-------------CSEEEEESCCTTTCEEEECE
T ss_pred CCEEEECCCCCEEcCCCeEEEEEEEccCCCCEEEEEE-CCEECcCCC-------------CCEEEECCCCcccCEEEEEE
Confidence 4455556666778899999999999999999999999 444332211 23899999999999999999
Q ss_pred EEcCCCceE--EEEEEEcc
Q psy16426 135 SKNSLGDTD--GSIKLYGK 151 (194)
Q Consensus 135 a~n~~g~~~--~~~~l~v~ 151 (194)
+.|..+... ..+.|.|.
T Consensus 76 a~n~~~~~~~s~~~~v~V~ 94 (96)
T 2ens_A 76 ATHSSHGPQESRAVSISII 94 (96)
T ss_dssp ECCSSCCCEECCCEEEEEC
T ss_pred EEeCCCCcEEEEEEEEEEe
Confidence 999765433 34555553
No 289
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.19 E-value=2.4e-10 Score=95.59 Aligned_cols=123 Identities=17% Similarity=0.276 Sum_probs=81.3
Q ss_pred CeeeeeCCCcEEEEeee-eccCCceeEEEecCce--------------------------EE------------------
Q psy16426 17 QLVGAMEGDQMTLECHS-EAYPKSINYWTKENGE--------------------------II------------------ 51 (194)
Q Consensus 17 ~~~~v~~G~~v~L~C~~-~g~p~~~v~W~k~~~~--------------------------l~------------------ 51 (194)
+...+.+|++++|.|.+ .+.|.+.|.|++++.. |.
T Consensus 374 ~~~~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~Y~C~~~n 453 (581)
T 3o3u_N 374 QNITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNGSLFLPAVGIQDEGIFRCQAMN 453 (581)
T ss_dssp EEEEEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTSCEEESSCCGGGCEEEEEEEEC
T ss_pred cccceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCceEEEeccccccCeEEEEEEEc
Confidence 45678899999999998 7888899999997541 11
Q ss_pred -------------EeeC---CeEEeccceeEEeeCCe-EEEEEEeec-cCCCccEEEecCcEEeeCC-CceeE----Ee-
Q psy16426 52 -------------AQVP---PMIWIQNQLVGAMEGDQ-MTLECHSEA-YPKSINYWTKENGEIIAQG-SKYEP----IL- 107 (194)
Q Consensus 52 -------------v~~~---p~i~~~~~~~~~~~g~~-~~l~C~~~~-~p~p~v~W~~~~~~~~~~~-~~~~~----~~- 107 (194)
|..+ |.+... ...+..+.. +.|.|.+.+ .|.|.++|++ ++..+... ..... ..
T Consensus 454 ~~~~~~~~~~~l~V~~~~~~p~i~~~--~~~~~~~~~~~~l~C~~~~~~P~~~i~W~~-~g~~l~~~~~~~~~~~~~~~~ 530 (581)
T 3o3u_N 454 RNGKETKSNYRVRVYQIPGKPEIVDS--ASELTAGVPNKVGTCVSEGSYPAGTLSWHL-DGKPLVPNEKGVSVKEQTRRH 530 (581)
T ss_dssp TTSCEEEEEEEEEEEBCCCCCEEESC--CSEECTTSCEEEEEEEEEEEBSCCEEEEEE-TTEECCTTSTTEEEEEEEEEC
T ss_pred CCCceeEEEEEEEEEcCCCCCEEEcC--CcccccCCceeEEEEECCCCCCCCeEEEEE-CCEECCCCCCeEEEEeeeEEc
Confidence 2221 222211 122344444 467999988 5889999999 55554432 22211 11
Q ss_pred -cCCceeEEEEEEEeecC-CCCCeEEEEEEEcCCCce
Q psy16426 108 -LDNAYKIHMKLTIKAVT-KQDFGAYKCVSKNSLGDT 142 (194)
Q Consensus 108 -~~~~~~~~~~L~i~~~~-~~d~g~y~C~a~n~~g~~ 142 (194)
..+.|...++|.|..+. .++.+.|+|.+.|..+..
T Consensus 531 ~~~g~y~~~s~L~i~~~~~~d~~~~y~C~~~n~~~~~ 567 (581)
T 3o3u_N 531 PETGLFTLQSELMVTPARGGDPRPTFSCSFSPGLPRH 567 (581)
T ss_dssp TTTCCEEEEEEEEECCCTTSCSCCCEEEEEECSSCSS
T ss_pred CCCceEEEEEEEEEEeccccCCCceEEEEEeccCCCC
Confidence 23346667899999988 455789999999987544
No 290
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.19 E-value=1.8e-10 Score=75.26 Aligned_cols=77 Identities=25% Similarity=0.280 Sum_probs=55.0
Q ss_pred CCeEEecc-ceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCC-CceeEEecCCceeEEEEEEEeecCCCCCeEEE
Q psy16426 55 PPMIWIQN-QLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQG-SKYEPILLDNAYKIHMKLTIKAVTKQDFGAYK 132 (194)
Q Consensus 55 ~p~i~~~~-~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~-~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~ 132 (194)
+|.|.... ....+.+|+.+.|.|.+ +.|.+.+.|++ ++..+... .++.....+. ..+|.|.++..+|.|.|+
T Consensus 15 ~p~f~~~~~~~~~v~~G~~v~L~C~~-~~p~~~v~W~k-~g~~l~~~~~~~~~~~~~~----~~~L~I~~v~~~D~G~Y~ 88 (104)
T 1pd6_A 15 STAFQKKLEPAYQVSKGHKIRLTVEL-ADHDAEVKWLK-NGQEIQMSGSKYIFESIGA----KRTLTISQCSLADDAAYQ 88 (104)
T ss_dssp TSSCSEECCSEEEEETTSCEEEEEEC-SSSSSCCEEEE-SSSEECCCSSSSEEEEETT----EEEEEECSCSSSSCEEEE
T ss_pred CCEEEEcCCCcEEEecCCCEEEEEEE-cCCCCEEEEEE-CCEECCCCCCeEEEEecCC----EEEEEECCCCcccCEEEE
Confidence 44443333 34678899999999999 78888999999 44444433 4444322222 358999999999999999
Q ss_pred EEEEc
Q psy16426 133 CVSKN 137 (194)
Q Consensus 133 C~a~n 137 (194)
|.+.|
T Consensus 89 C~a~~ 93 (104)
T 1pd6_A 89 CVVGG 93 (104)
T ss_dssp EEETT
T ss_pred EEECC
Confidence 99944
No 291
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.19 E-value=1e-10 Score=94.50 Aligned_cols=79 Identities=16% Similarity=0.341 Sum_probs=52.9
Q ss_pred EeeCCeEEEEEEeecc-CCC-ccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEE
Q psy16426 67 AMEGDQMTLECHSEAY-PKS-INYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDG 144 (194)
Q Consensus 67 ~~~g~~~~l~C~~~~~-p~p-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~ 144 (194)
+.+|+.+.|.|.+.+. |.| .+.|++++ ...... .+......+.+...+.|.|.++..+| |.|+|.+.|..|....
T Consensus 131 ~~~G~~v~L~C~~~g~~P~p~~v~W~k~~-~~~~~~-~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~ 207 (434)
T 1igy_B 131 AQTNSMVTLGCLVKGYFPEPVTVTWNSGS-LSSGVH-TFPAVLQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASSTKV 207 (434)
T ss_dssp CCCTTEEEEEEEEEEEBSSCCEEEETTTT-BCSSEE-ECCCEECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTTCCE
T ss_pred cCCCCcEEEEEEEeeecCCCeEEEEeeCC-cCCCeE-ecCceecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCccc
Confidence 4579999999999886 665 89999843 321100 00001122334455689999998888 9999999999987544
Q ss_pred EEEE
Q psy16426 145 SIKL 148 (194)
Q Consensus 145 ~~~l 148 (194)
...+
T Consensus 208 ~~~~ 211 (434)
T 1igy_B 208 DKKI 211 (434)
T ss_dssp EEEC
T ss_pred eeec
Confidence 4333
No 292
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.19 E-value=6.1e-10 Score=73.73 Aligned_cols=92 Identities=20% Similarity=0.215 Sum_probs=66.9
Q ss_pred CCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCC----------ceeEEecCCceeEEEEEEEeecC
Q psy16426 55 PPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGS----------KYEPILLDNAYKIHMKLTIKAVT 124 (194)
Q Consensus 55 ~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~L~i~~~~ 124 (194)
++.|........+.+|+++.|.|.+.+ .|.+.|++ |+..+.... ++. +..++. ..+|.|.++.
T Consensus 8 ~~~~~~~l~d~~v~eG~~a~f~C~vs~--~p~v~W~k-nG~~l~~~~~~~~~~~~~~r~~-i~~~g~---~~~L~I~~v~ 80 (112)
T 2e6q_A 8 TARLVAGLEDVQVYDGEDAVFSLDLST--IIQGTWFL-NGEELKSNEPEGQVEPGALRYR-IEQKGL---QHRLILHAVK 80 (112)
T ss_dssp CCCEEECCCCEEEETTCEEEEEEEESS--CCCCEEEE-SSCBCCSSCCCTTSCTTSCEEE-ECCBTT---EEEEEEESCC
T ss_pred CcEEecCCCCeEEcCCCcEEEEEEECC--CCeEEEEE-CCEECccCcccccccccccEEE-EEeCCc---EEEEEECCCC
Confidence 345666677888999999999999987 67899999 565555543 443 222222 4589999999
Q ss_pred CCCCeEEEEEEEcCCCceEEEEEEEcccCCCC
Q psy16426 125 KQDFGAYKCVSKNSLGDTDGSIKLYGKKKKKK 156 (194)
Q Consensus 125 ~~d~g~y~C~a~n~~g~~~~~~~l~v~~~p~~ 156 (194)
.+|.|.|+|...+ ...++..|.|...|..
T Consensus 81 ~~D~G~Y~~~~~~---~~~ssA~L~V~~~p~~ 109 (112)
T 2e6q_A 81 HQDSGALVGFSCP---GVQDSAALTIQESSGP 109 (112)
T ss_dssp STTCSEEEEEEET---TEEEEEEEEEECSSCS
T ss_pred HHHCccEEEEEEC---CeeEEEEEEEeCCCcc
Confidence 9999999886554 3355677888777654
No 293
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.18 E-value=3.8e-10 Score=81.03 Aligned_cols=99 Identities=14% Similarity=0.145 Sum_probs=71.4
Q ss_pred CCeEEeccceeEEeeCCeEEEEEEee-ccCCCccEEEecCcEEeeCCC--ceeEEecCC---ceeEEEEEEEeecCCCCC
Q psy16426 55 PPMIWIQNQLVGAMEGDQMTLECHSE-AYPKSINYWTKENGEIIAQGS--KYEPILLDN---AYKIHMKLTIKAVTKQDF 128 (194)
Q Consensus 55 ~p~i~~~~~~~~~~~g~~~~l~C~~~-~~p~p~v~W~~~~~~~~~~~~--~~~~~~~~~---~~~~~~~L~i~~~~~~d~ 128 (194)
+|.+...+....+.+|+.+.|.|.+. +.|.+.+.|++ ++..+.... ++......+ .+...+.|.|.++...|.
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~-~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 80 (195)
T 2c5d_C 2 ESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLR-DGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDT 80 (195)
T ss_dssp CCSEEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEE-TTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTC
T ss_pred CCeeccChhheEEecCCcEEEecccccCCCCcEEEEEE-CCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCC
Confidence 56677777888899999999999999 88999999999 555544332 222222221 111257999999999999
Q ss_pred eEEEEEEEcCCCceEEE-EEEEcccCC
Q psy16426 129 GAYKCVSKNSLGDTDGS-IKLYGKKKK 154 (194)
Q Consensus 129 g~y~C~a~n~~g~~~~~-~~l~v~~~p 154 (194)
|.|+|.+.|..+..... +.|.|...|
T Consensus 81 G~Y~C~~~~~~~~~~~~~~~l~V~~~p 107 (195)
T 2c5d_C 81 GQYQCLVFLGHQTFVSQPGYVGLEGLP 107 (195)
T ss_dssp EEEEEEEEETTEEEECCCEEEEECCSC
T ss_pred cEEEEEEEeCCCceecccEEEEEecCC
Confidence 99999999987765433 666665543
No 294
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.17 E-value=3.7e-10 Score=92.35 Aligned_cols=132 Identities=11% Similarity=0.207 Sum_probs=83.0
Q ss_pred cCCeEEEc-CCeeeeeCCCcEEEEeeeeccCC---ceeEEEecCce---------------------EE-----------
Q psy16426 8 VPPMIWIQ-NQLVGAMEGDQMTLECHSEAYPK---SINYWTKENGE---------------------II----------- 51 (194)
Q Consensus 8 ~~P~~~~~-~~~~~v~~G~~v~L~C~~~g~p~---~~v~W~k~~~~---------------------l~----------- 51 (194)
.+|.+... +....+.+|++++|.|.+.|.++ +.|+| .++.. |.
T Consensus 245 ~~p~v~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W-~~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~d~G~ 323 (475)
T 1iga_A 245 CHPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW-TPSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKT 323 (475)
T ss_pred CCcEEEEcCCChHHhccCCceEEEEEEEcccCCCceEEEE-CCCCcCCccccCceECCCCCEEEEEEEEEchHHhccCCc
Confidence 35665333 34444689999999999998744 68999 43211 11
Q ss_pred -----------------E-----eeCCeEEeccce-eEEeeCCeEEEEEEeeccCC--CccEEEecCcEEeeCCCcee--
Q psy16426 52 -----------------A-----QVPPMIWIQNQL-VGAMEGDQMTLECHSEAYPK--SINYWTKENGEIIAQGSKYE-- 104 (194)
Q Consensus 52 -----------------v-----~~~p~i~~~~~~-~~~~~g~~~~l~C~~~~~p~--p~v~W~~~~~~~~~~~~~~~-- 104 (194)
+ ..+|.+.+.+.. ..+..|+.+.|.|.+.+.++ +.+.|++ ++..+.......
T Consensus 324 Y~C~a~n~~~~~~~~~~v~~~~~~~~P~v~~~~~~~~~v~~g~~~~L~C~~~g~~P~~~~v~W~k-~g~~l~~~~~~~~~ 402 (475)
T 1iga_A 324 FTCTAAYPESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQ-GSQELPREKYLTWA 402 (475)
T ss_pred EEEEEEcCCCCCceEEEeecCCCCCCCeEEEECCChHHhccCCceEEEEEEeeeECCCCEEEEEE-CCEECCCCceeecc
Confidence 1 123433332221 22457888999999998643 4788999 555543331110
Q ss_pred -EEe---cCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCc
Q psy16426 105 -PIL---LDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGD 141 (194)
Q Consensus 105 -~~~---~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~ 141 (194)
... .++.+...+.|.|......|.|.|+|.+.|....
T Consensus 403 ~~~~~~~~~gt~~~~s~L~i~~~~~~~~g~YtC~a~n~~l~ 443 (475)
T 1iga_A 403 SRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALP 443 (475)
T ss_pred cccccCCCCCcEEEEEEEEEChHHhcCCCEEEEEEEcCCCC
Confidence 011 2334556678888888888999999999997654
No 295
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.17 E-value=3.2e-10 Score=83.20 Aligned_cols=73 Identities=16% Similarity=0.292 Sum_probs=45.3
Q ss_pred eeCCeEEEEEEeecc-CCC-ccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEE
Q psy16426 68 MEGDQMTLECHSEAY-PKS-INYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGS 145 (194)
Q Consensus 68 ~~g~~~~l~C~~~~~-p~p-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~ 145 (194)
..|+.+.|.|.+.+. |.| .+.|++++. ..... .......++.+...+.|. ....+| |.|+|.+.|..+.....
T Consensus 135 ~~g~~v~L~C~~~g~~P~p~~v~W~~~g~-~~~~~-~~~~~~~~g~~~~~s~L~--~~~~~~-g~ytC~v~n~~~~~~~~ 209 (215)
T 1c5d_H 135 TTSSTVTLGCLVKGYFPEPVTVTWNSGAL-SSDVH-TFPAVLQSGLYTLTSSVT--SSTWPS-QTVTCNVAHPASSTKVD 209 (215)
T ss_dssp CCCSSEEEEEEEEEEBSSCCEEEEGGGTT-CCSCC-BCCCEEETTEEEEEEEEE--ESSTTT-SCCEEEEEEGGGTEEEE
T ss_pred ccCCcEEEEEEEeeeEcCCcEEEEccCCc-cCceE-ecCcccCCCCEEEEEEEe--cccCCC-CeEEEEEEeCCCCccEE
Confidence 468899999999987 767 899998443 22111 111112223343344555 444456 99999999988776543
No 296
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.16 E-value=2.2e-10 Score=82.88 Aligned_cols=100 Identities=14% Similarity=0.128 Sum_probs=70.4
Q ss_pred EEeccceeEEeeCCeEEEEEEeeccCC-----CccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEE
Q psy16426 58 IWIQNQLVGAMEGDQMTLECHSEAYPK-----SINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYK 132 (194)
Q Consensus 58 i~~~~~~~~~~~g~~~~l~C~~~~~p~-----p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~ 132 (194)
+...+..+.+.+|+++.|.|.+.+.+. +.+.|++.++.......+.. ...+.......+|.|.++..+|.|.|+
T Consensus 5 v~~p~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~-~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 83 (202)
T 3bp6_B 5 VTAPKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERAT-LLEEQLPLGKALFHIPSVQVRDSGQYR 83 (202)
T ss_dssp EECSCSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCE-ECGGGGGGTEEEEEECSCCGGGCEEEE
T ss_pred EecCCcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceE-EeeccccCCeeEEEECCCCHHHCcEEE
Confidence 344455677889999999999988775 78999984444333333332 222211112469999999999999999
Q ss_pred EEEEcCCCceEEEEEEEcccCCCCCh
Q psy16426 133 CVSKNSLGDTDGSIKLYGKKKKKKKK 158 (194)
Q Consensus 133 C~a~n~~g~~~~~~~l~v~~~p~~p~ 158 (194)
|.+.|..+.....+.|.|...+..|.
T Consensus 84 C~~~~~~~~~~~~~~l~V~~~~~~p~ 109 (202)
T 3bp6_B 84 CLVICGAAWDYKYLTVKVKASYMRID 109 (202)
T ss_dssp EEEEETTEEEEEEEEEEEEBCCCCEE
T ss_pred EEEEeCCCcceEEEEEEecCCCCccc
Confidence 99999998888888888877665444
No 297
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.16 E-value=1.2e-10 Score=94.59 Aligned_cols=97 Identities=26% Similarity=0.422 Sum_probs=71.1
Q ss_pred CCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCc-eeEEecCCceeEEEEEEEeecCCCCCeEEEE
Q psy16426 55 PPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSK-YEPILLDNAYKIHMKLTIKAVTKQDFGAYKC 133 (194)
Q Consensus 55 ~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~-~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C 133 (194)
+|.+...+....+.+|+.+.|.|.+ +.|.|.+.|+++++........ .......+ ++|.|.+++.+|.|.|+|
T Consensus 341 ~P~i~~~~~~~~v~~G~~v~L~C~~-~~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~-----~~L~I~~v~~~D~G~Y~C 414 (440)
T 3zyj_A 341 APVIVEPPADLNVTEGMAAELKCRA-STSLTSVSWITPNGTVMTHGAYKVRIAVLSD-----GTLNFTNVTVQDTGMYTC 414 (440)
T ss_dssp CCCEEECCCCEEECTTSCCEECCEE-SSTTSEEEEECTTSCEEESSSCCSSEEECTT-----CCEEESSCCSTTCEEEEE
T ss_pred CCcccccccceeeccCceEEEEeec-CCCCCceEEEeCCCceeeccCCCceEEEccC-----CeEEEccCChhhCEEEEE
Confidence 5667666777888999999999999 5688999999866655443211 11112222 379999999999999999
Q ss_pred EEEcCCCceEEEEEEEcccCCCCC
Q psy16426 134 VSKNSLGDTDGSIKLYGKKKKKKK 157 (194)
Q Consensus 134 ~a~n~~g~~~~~~~l~v~~~p~~p 157 (194)
.|.|..|...+++.+.|...|..+
T Consensus 415 ~a~N~~G~~~~~~~~~v~~~~~~~ 438 (440)
T 3zyj_A 415 MVSNSVGNTTASATLNVTGTHHHH 438 (440)
T ss_dssp EEECSSCEEEEEEEEEEC------
T ss_pred EEEcCCCcEEEEEEEEEecccccc
Confidence 999999999999999998776654
No 298
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.15 E-value=5.8e-10 Score=79.66 Aligned_cols=96 Identities=19% Similarity=0.222 Sum_probs=68.6
Q ss_pred CCeEEeccceeEEeeCCeEEEEEEeeccC-CCccEEEecCcEEee-CCCceeEEecCCceeEEEEEEEeecCCCCCeEEE
Q psy16426 55 PPMIWIQNQLVGAMEGDQMTLECHSEAYP-KSINYWTKENGEIIA-QGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYK 132 (194)
Q Consensus 55 ~p~i~~~~~~~~~~~g~~~~l~C~~~~~p-~p~v~W~~~~~~~~~-~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~ 132 (194)
++.+...+....+.+|+.+.|.|.+.+.+ .+.+.|++.++.... ...++.....+. ..+.|.|.++..+|.|.|+
T Consensus 2 p~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~ 78 (191)
T 1epf_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDD---DSSTLTIYNANIDDAGIYK 78 (191)
T ss_dssp -CCEEEESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEET---TEEEEEECSCCGGGCEEEE
T ss_pred ceEEEecCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCC---CceEEEEccCCcccCEEEE
Confidence 34566667777889999999999999876 788999983444333 333443222111 2469999999999999999
Q ss_pred EEEEcCC-CceEEEEEEEcccC
Q psy16426 133 CVSKNSL-GDTDGSIKLYGKKK 153 (194)
Q Consensus 133 C~a~n~~-g~~~~~~~l~v~~~ 153 (194)
|.+.|.. +.....+.|.+...
T Consensus 79 C~~~~~~~~~~~~~~~l~v~~~ 100 (191)
T 1epf_A 79 CVVTAEDGTQSEATVNVKIFQK 100 (191)
T ss_dssp EEEEETTTEEEEEEEEEEEECC
T ss_pred EEEEcCCCcceEEEEEEEeecC
Confidence 9999988 44556677766544
No 299
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.15 E-value=6e-10 Score=88.24 Aligned_cols=95 Identities=24% Similarity=0.298 Sum_probs=70.7
Q ss_pred CCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecC-cEEeeC-----CCceeEEecCCceeEEEEEEEeecCCCCC
Q psy16426 55 PPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKEN-GEIIAQ-----GSKYEPILLDNAYKIHMKLTIKAVTKQDF 128 (194)
Q Consensus 55 ~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 128 (194)
+|.|.. .....+.+|+.+.|.|.+.|.|.|.+.|++++ +..+.. ..++.... + ...+.|.|.++..+|.
T Consensus 1 ~P~i~~-~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~-~---~~~~~L~i~~v~~~D~ 75 (389)
T 2jll_A 1 QPHIIQ-LKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKG-Q---HGSSSLHIKDVKLSDS 75 (389)
T ss_dssp CCEEEE-CCCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEE-C---SSEEEEEEESCCGGGC
T ss_pred CCeEEe-cCceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEec-c---CCcceEEEcccChhhC
Confidence 355664 44566788999999999999999999999941 544432 22332111 1 1246999999999999
Q ss_pred eEEEEEEEcCCCceEEEEEEEcccCC
Q psy16426 129 GAYKCVSKNSLGDTDGSIKLYGKKKK 154 (194)
Q Consensus 129 g~y~C~a~n~~g~~~~~~~l~v~~~p 154 (194)
|.|+|.|.|..|.....+.|.|...|
T Consensus 76 G~Y~C~a~n~~g~~~~~~~l~V~~~P 101 (389)
T 2jll_A 76 GRYDCEAASRIGGHQKSMYLDIEYAP 101 (389)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEEEEE
T ss_pred EEEEEEEEeCCCCcceEEEEEEEeCC
Confidence 99999999999998888888876544
No 300
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.15 E-value=1.3e-09 Score=90.27 Aligned_cols=145 Identities=13% Similarity=0.184 Sum_probs=87.4
Q ss_pred ccCCeEEEcC-CeeeeeCCCcEEEEeeeeccCC--ceeEEEecCceEE--------------------------------
Q psy16426 7 NVPPMIWIQN-QLVGAMEGDQMTLECHSEAYPK--SINYWTKENGEII-------------------------------- 51 (194)
Q Consensus 7 ~~~P~~~~~~-~~~~v~~G~~v~L~C~~~g~p~--~~v~W~k~~~~l~-------------------------------- 51 (194)
..+|.+.+.+ ....+.+|++++|.|.+.|..+ ..|+|++++..+.
T Consensus 294 ~~~p~v~~~~p~~~~~~~g~~~~L~C~v~g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~ 373 (512)
T 1zvo_C 294 TQPLGVYLLTPAVQDLWLRDKATFTCFVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAG 373 (512)
T ss_pred CCCCEEEEECCChHHhccCCceEEEEEEeceECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCC
Confidence 3567765544 4455778999999999998633 4899999864321
Q ss_pred ------Eee----CC--eEEe-------ccceeEEe----eCCeEE-EEEEeeccCCC--ccEEEecCcEEeeCCCce--
Q psy16426 52 ------AQV----PP--MIWI-------QNQLVGAM----EGDQMT-LECHSEAYPKS--INYWTKENGEIIAQGSKY-- 103 (194)
Q Consensus 52 ------v~~----~p--~i~~-------~~~~~~~~----~g~~~~-l~C~~~~~p~p--~v~W~~~~~~~~~~~~~~-- 103 (194)
+.. .+ .+.. .+..+.+. .|+.+. |.|.+.|++++ .+.|++ ++.........
T Consensus 374 g~y~C~a~n~~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~~~~~~~L~C~~~g~~P~~i~v~W~k-~g~~~~~~~~~~~ 452 (512)
T 1zvo_C 374 TSVTCTLNHPSLPPQRLMALREPAAQAPVKLSLNLLASSDPPEAASWLLCEVSGFSPPNILLMWLE-DQREVNTSGFAPA 452 (512)
T ss_pred CeEEEEEEeCCCCCCceeEEeecCCCCCCCCEEEEEccCcCCCCceEEEEEEeeeCCCCcEEEEEE-CCeECcCcccccc
Confidence 100 00 0100 00111111 477788 99999986554 467999 55554332111
Q ss_pred eE-EecCCc-eeEEEEEEEeecCCCCCeEEEEEEEcCCCce--EEEEEEEccc
Q psy16426 104 EP-ILLDNA-YKIHMKLTIKAVTKQDFGAYKCVSKNSLGDT--DGSIKLYGKK 152 (194)
Q Consensus 104 ~~-~~~~~~-~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~--~~~~~l~v~~ 152 (194)
.. ...++. |...+.|.|.....+|.|.|+|.+.|..... ...+.|.+..
T Consensus 453 ~~~~~~dg~~~~~~s~L~v~~~~~~~~g~YtC~v~h~~l~~~~~~~~~~~v~~ 505 (512)
T 1zvo_C 453 RPPPQPGSTTFWAWSVLRVPAPPSPQPATYTCVVSHEDSRTLLNASRSLEVSY 505 (512)
T ss_pred ceeECCCCCEEEEEEEEEECchhcCCCCeEEEEEEecCCCCceEEEEEEEecc
Confidence 11 122332 5556788888888888999999999976543 3445555544
No 301
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.14 E-value=2.2e-10 Score=81.77 Aligned_cols=93 Identities=26% Similarity=0.468 Sum_probs=69.8
Q ss_pred CCeEEeccc--eeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEE
Q psy16426 55 PPMIWIQNQ--LVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYK 132 (194)
Q Consensus 55 ~p~i~~~~~--~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~ 132 (194)
||.+..... ...+.+|+.+.|.|.+.+.|.+.+.|++ ++.......++. ...+. .+|.|.++...|.|.|+
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~~~~~~~-~~~~~-----~~L~i~~~~~~d~G~Y~ 74 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFR-NGKLIEENEKYI-LKGSN-----TELTVRNIINSDGGPYV 74 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEE-TTEECCCSSSEE-EETTT-----TEEEECSCCGGGCEEEE
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEE-CCeEcCCCccEE-EeCCe-----eEEEEecCChhcCcEEE
Confidence 676765543 4556789999999999999989999999 555554444443 12222 38999999999999999
Q ss_pred EEEEcCCCceEEEEEEEcccCC
Q psy16426 133 CVSKNSLGDTDGSIKLYGKKKK 154 (194)
Q Consensus 133 C~a~n~~g~~~~~~~l~v~~~p 154 (194)
|.+.|..+.....+.|.|...|
T Consensus 75 C~~~~~~~~~~~~~~l~V~~~p 96 (192)
T 2va4_A 75 CRATNKAGEDEKQAFLQVFVQP 96 (192)
T ss_dssp EEEEETTEEEEEEEEEEEEEEE
T ss_pred EEEEccccccceEEEEEEEccC
Confidence 9999998887777777765443
No 302
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.14 E-value=7.6e-11 Score=86.27 Aligned_cols=42 Identities=24% Similarity=0.423 Sum_probs=36.5
Q ss_pred ccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCce
Q psy16426 7 NVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGE 49 (194)
Q Consensus 7 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~ 49 (194)
..+|.| ..+.++.+.+|++++|.|.+.|.|.+.+.|++++..
T Consensus 17 ~~~P~~-~~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~ 58 (215)
T 3mtr_A 17 MYAPKL-QGPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQL 58 (215)
T ss_dssp CEEEEE-ECCSEEEECTTCCEEEEEEEEEESCCEEEEEETTEE
T ss_pred ecCCcc-cCCceEEEECCCCEEEEEEEeecCCCEEEEEECCeE
Confidence 467888 577778899999999999999999999999998754
No 303
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.13 E-value=5.6e-10 Score=83.32 Aligned_cols=81 Identities=12% Similarity=0.180 Sum_probs=52.1
Q ss_pred eeCCeEEEEEEeeccCC-C-ccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEE
Q psy16426 68 MEGDQMTLECHSEAYPK-S-INYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGS 145 (194)
Q Consensus 68 ~~g~~~~l~C~~~~~p~-p-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~ 145 (194)
..|+.+.|.|.+.+.++ + .+.|++++ ..............++.+...+.|.|......| |.|+|.+.|..+.....
T Consensus 153 ~~g~~v~l~C~~~~~~p~~~~v~W~~~g-~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~ 230 (239)
T 3tv3_H 153 TSGGTAALGCLVKDYFPEPVTVSWNSGA-LTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVD 230 (239)
T ss_dssp --TTEEEEEEEEEEEBSSCCEEEEGGGT-BCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEE
T ss_pred ccCCcEEEEEEEeeEeCCCeEEEEEECC-ccCceEecCceECCCCCEEEEEEEEEchhhcCC-CEEEEEEEECCCCceEE
Confidence 35789999999988543 3 36798844 321100000112234556667789999988888 99999999987766655
Q ss_pred EEEEc
Q psy16426 146 IKLYG 150 (194)
Q Consensus 146 ~~l~v 150 (194)
..|.+
T Consensus 231 ~~l~~ 235 (239)
T 3tv3_H 231 KRVEP 235 (239)
T ss_dssp EECCC
T ss_pred EEecc
Confidence 55544
No 304
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.13 E-value=4.2e-10 Score=79.86 Aligned_cols=97 Identities=15% Similarity=0.185 Sum_probs=67.3
Q ss_pred CCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEE
Q psy16426 55 PPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCV 134 (194)
Q Consensus 55 ~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~ 134 (194)
+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++ ++............... ....+.|.|.++..+|.|.|+|.
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k-~~~~~~~~~~~~~~~~~--~~~~~~L~i~~~~~~d~G~Y~C~ 78 (182)
T 1rhf_A 2 GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVK-DGAVVQNLDQLYIPVSE--QHWIGFLSLKSVERSDAGRYWCQ 78 (182)
T ss_dssp -----CCCEEEEEETTCCEEEEEEEESCSSCCEEEEE-TTEECCSSEEEEEEEET--TEEEEEEEESSCCGGGCEEEEEE
T ss_pred CCEEEeCCcceEEeCCCcEEEEEEEeCCCCCeEEEEE-CCeecCCCCceEEEecC--CCceEEEEEeecCcccCeEEEEE
Confidence 3455556677788999999999999998999999999 55554444333222221 12356999999999999999999
Q ss_pred EEcCCCceE-EEEEEEcccCC
Q psy16426 135 SKNSLGDTD-GSIKLYGKKKK 154 (194)
Q Consensus 135 a~n~~g~~~-~~~~l~v~~~p 154 (194)
+.|..+... ..+.|.|...|
T Consensus 79 ~~~~~~~~~~~~~~l~V~~~p 99 (182)
T 1rhf_A 79 VEDGGETEISQPVWLTVEGVP 99 (182)
T ss_dssp ESSCTTCEECCCEEEEEECSC
T ss_pred EEcCCCcEEEEEEEEEEecCC
Confidence 999877533 45666665443
No 305
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.13 E-value=4.7e-10 Score=84.28 Aligned_cols=70 Identities=23% Similarity=0.370 Sum_probs=47.8
Q ss_pred CCeEEEEEEeec-cCCC-ccEEEecCcEEeeCCCceeEEe-------cCCceeEEEEEEEeecCCCC-CeEEEEEEEcCC
Q psy16426 70 GDQMTLECHSEA-YPKS-INYWTKENGEIIAQGSKYEPIL-------LDNAYKIHMKLTIKAVTKQD-FGAYKCVSKNSL 139 (194)
Q Consensus 70 g~~~~l~C~~~~-~p~p-~v~W~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~L~i~~~~~~d-~g~y~C~a~n~~ 139 (194)
|..+.|.|.+.+ .|.+ .+.|++ ++..+.......... .++.+...+.|.|......| .|.|+|.+.+..
T Consensus 139 g~~~~L~C~~~g~~P~~i~v~W~k-~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~ytC~v~h~~ 217 (253)
T 3to4_D 139 TQKATLVCLATGFYPDHVELSWWV-NGKEVHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYG 217 (253)
T ss_dssp HSEEEEEEEEEEEBSSCEEEEEEE-TTEEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECC
T ss_pred CCceEEEEEEceEECCcEEEEEEE-CCEECCCceecccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEeCC
Confidence 578999999998 4555 788999 565554332111000 34556666788888887666 779999999864
Q ss_pred C
Q psy16426 140 G 140 (194)
Q Consensus 140 g 140 (194)
.
T Consensus 218 l 218 (253)
T 3to4_D 218 L 218 (253)
T ss_dssp B
T ss_pred C
Confidence 3
No 306
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.12 E-value=1.5e-09 Score=77.36 Aligned_cols=92 Identities=22% Similarity=0.315 Sum_probs=68.5
Q ss_pred EEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEc
Q psy16426 58 IWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKN 137 (194)
Q Consensus 58 i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n 137 (194)
+...+....+.+|+.+.|.|.+.+.|. .+.|+++++.......++...... ..+.|.|.++..+|.|.|+|.+.|
T Consensus 5 ~~~~~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~~----~~~~L~i~~~~~~d~G~Y~C~~~~ 79 (189)
T 2v44_A 5 VTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEG----VRSRLTIYNANIEDAGIYRCQATD 79 (189)
T ss_dssp EEESCSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEET----TEEEEEECSCCGGGCEEEEEEEEC
T ss_pred EEecCCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEECCC----CeEEEEEccCCcccCeEEEEEEEe
Confidence 445667778899999999999998876 889998555555444444322221 135999999999999999999999
Q ss_pred CCCce-EEEEEEEcccCC
Q psy16426 138 SLGDT-DGSIKLYGKKKK 154 (194)
Q Consensus 138 ~~g~~-~~~~~l~v~~~p 154 (194)
..|.. ...+.|.|...|
T Consensus 80 ~~g~~~~~~~~l~v~~~p 97 (189)
T 2v44_A 80 AKGQTQEATVVLEIYQKL 97 (189)
T ss_dssp TTSCEEEEEEEEEEECCC
T ss_pred CCCCcEEEEEEEEEecCC
Confidence 98876 456777765544
No 307
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.11 E-value=7e-10 Score=82.31 Aligned_cols=71 Identities=20% Similarity=0.367 Sum_probs=47.5
Q ss_pred CCeEEEEEEeecc-CC-CccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCce
Q psy16426 70 GDQMTLECHSEAY-PK-SINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDT 142 (194)
Q Consensus 70 g~~~~l~C~~~~~-p~-p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~ 142 (194)
|..+.|.|.+.+. |. +.++|++.++..+...........++.|...+.|.|..... + |.|+|.+.|..+..
T Consensus 145 g~~~~L~C~~~g~~P~~~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-~~ytC~v~~~~~~~ 217 (230)
T 1ypz_F 145 HKTGTYLCLLEAFFPDVIRVYWKEKDGNTILDSQEGDTLKTNDTYMKFSWLTVPERAM-G-KEHRCIVKHENNKG 217 (230)
T ss_dssp HSCEEEEEEEEEESSCCCEEEEECTTSSCBCCCEECCCEEETTEEEEEEEEEECGGGT-T-SCEEEEEECSSCTT
T ss_pred CCcceEEEEEeeecCCCeEEEEEccCCeEccccccceeecCCCCEEEEEEEEEEhhhC-C-CEEEEEEEECCCCC
Confidence 6789999999886 54 58999984443332211111123445555667899988775 4 89999999987653
No 308
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.11 E-value=1.6e-10 Score=82.55 Aligned_cols=92 Identities=29% Similarity=0.445 Sum_probs=66.5
Q ss_pred eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEee-CCCceeEEecCCceeEEEEEEEeecCCCCCeEEE
Q psy16426 54 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIA-QGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYK 132 (194)
Q Consensus 54 ~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~-~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~ 132 (194)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++ ++.... ...++. ...++ ..|.|.+++.+|.|.|+
T Consensus 6 ~~P~i~~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~-~~~~~~~~~~~~~-~~~~~-----~~L~i~~~~~~d~G~Y~ 78 (192)
T 2iep_A 6 KAPVITTPLETVDALVEEVATFMCAVESYPQPEISWTR-NKILIKLFDTRYS-IRENG-----QLLTILSVEDSDDGIYC 78 (192)
T ss_dssp EEEEESSCCCEEEEETTSCEEEECCEEEESCCEEEEEE-TTEECCTTCTTEE-EEGGG-----TEEEESSCCGGGCEEEE
T ss_pred CCceeecCccceeeeCCCcEEEEeeCCCCCCCeEEEEE-CCEEccccCccEE-EcCCc-----cEEEEcCCCcccCeEEE
Confidence 35566656667778999999999999999989999999 444433 233333 12222 27999999999999999
Q ss_pred EEEEcCCCce-EEEEEEEccc
Q psy16426 133 CVSKNSLGDT-DGSIKLYGKK 152 (194)
Q Consensus 133 C~a~n~~g~~-~~~~~l~v~~ 152 (194)
|.+.|..|.. ...+.|.|..
T Consensus 79 C~~~~~~~~~~~~~~~l~v~~ 99 (192)
T 2iep_A 79 CTANNGVGGAVESCGALQVKM 99 (192)
T ss_dssp EEEECSSSCCEEEEEEEEEEE
T ss_pred EEEEcCCCceeEeEEEEEEEe
Confidence 9999988773 3445555443
No 309
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.11 E-value=5e-10 Score=72.42 Aligned_cols=83 Identities=20% Similarity=0.293 Sum_probs=60.0
Q ss_pred ceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCce
Q psy16426 63 QLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDT 142 (194)
Q Consensus 63 ~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~ 142 (194)
..+.+.+|+.+.|.|.+. .|.+.+.|++ ++..+....++.... +. ....|.|.++..+|.|.|+|.+.| .
T Consensus 19 ~~~~v~~G~~v~L~C~~~-~p~~~v~W~k-~g~~~~~~~~~~~~~-~~---~~~~L~I~~~~~~D~G~Y~C~a~~----~ 88 (102)
T 2eo1_A 19 REVQAEAGASATLSCEVA-QAQTEVTWYK-DGKKLSSSSKVRVEA-VG---CTRRLVVQQAGQAEAGEYSCEAGG----Q 88 (102)
T ss_dssp EEEEEETTCCEEECCBCS-CSSSCCEEEE-TTEECCCCSSEEEEE-ET---TEEEEEETTCCTTTCSCEEEEETT----E
T ss_pred ccEEEeCCCcEEEEEEec-CCCCceEEEE-CCEECCCCCCEEEEE-cC---CEEEEEECCCCcccCEEEEEEcCC----C
Confidence 345678999999999998 7889999999 555554444443222 11 135899999999999999999954 3
Q ss_pred EEEEEEEcccCCC
Q psy16426 143 DGSIKLYGKKKKK 155 (194)
Q Consensus 143 ~~~~~l~v~~~p~ 155 (194)
...+.|.|..+|.
T Consensus 89 ~~~~~l~V~~p~~ 101 (102)
T 2eo1_A 89 QLSFRLQVAGQCF 101 (102)
T ss_dssp ECCEEEEEESCCC
T ss_pred cEEEEEEEeCCCC
Confidence 4456676666543
No 310
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.11 E-value=4e-11 Score=88.06 Aligned_cols=131 Identities=11% Similarity=0.203 Sum_probs=81.2
Q ss_pred CCeE-EEcCCeeeeeCCCcEEEEeeeeccCC---ceeEEEecCce---------------------EE------------
Q psy16426 9 PPMI-WIQNQLVGAMEGDQMTLECHSEAYPK---SINYWTKENGE---------------------II------------ 51 (194)
Q Consensus 9 ~P~~-~~~~~~~~v~~G~~v~L~C~~~g~p~---~~v~W~k~~~~---------------------l~------------ 51 (194)
+|.+ ...|....+.+|++++|.|.+.+.++ +.|.| ++... |.
T Consensus 3 ~p~v~~~~P~~~~v~~G~~v~L~C~~~g~~p~~~~~v~W-~~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~g~Y 81 (214)
T 1ow0_A 3 HPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW-TPSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTF 81 (214)
T ss_dssp CCCCEEECCCHHHHHHCSSCCCEEEETTCCSCCCCCCCB-SSCSSCCCEECCCCCCSTTCCCEEEECTTTHHHHHHTCEE
T ss_pred CCEEEEECcChHHhccCCCcEEEEEEeeeECCCCeEEEE-cCCCCCCcccCCceECCCCcEEEEEEEEEeHHHcCCCCeE
Confidence 4554 45577778899999999999998754 68999 53210 00
Q ss_pred ----------------E-----eeCCeEEecc-ceeEEeeCCeEEEEEEeeccCC--CccEEEecCcEEeeCCCcee---
Q psy16426 52 ----------------A-----QVPPMIWIQN-QLVGAMEGDQMTLECHSEAYPK--SINYWTKENGEIIAQGSKYE--- 104 (194)
Q Consensus 52 ----------------v-----~~~p~i~~~~-~~~~~~~g~~~~l~C~~~~~p~--p~v~W~~~~~~~~~~~~~~~--- 104 (194)
+ ..+|.+.+.. ....+..|..+.|.|.+.|.++ +.+.|++ ++..+.......
T Consensus 82 ~C~~~~~~~~~~~~~~i~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k-~g~~l~~~~~~~~~~ 160 (214)
T 1ow0_A 82 TCTAAYPESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQ-GSQELPREKYLTWAS 160 (214)
T ss_dssp EEEECCSSCSSCEEEEEECCSSCCCCEEEEECCCTTTTTSSSEEEEEEEEEEESSSCCEEEEEE-TTEECCGGGSEECCC
T ss_pred EEEEecCCCCCceeEeeccCCCCCCCEEEecCCCHHHhccCCceEEEEEEeeeECCCcEEEEEE-CCEECCCCceeecCC
Confidence 1 0123332211 1111346788999999998643 4789999 555443321111
Q ss_pred EEe---cCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCc
Q psy16426 105 PIL---LDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGD 141 (194)
Q Consensus 105 ~~~---~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~ 141 (194)
... .++.|...+.|.|......+.|.|+|.+.|....
T Consensus 161 ~~~~~~~dgt~~~~s~l~v~~~~~~~~~~ytC~v~n~~l~ 200 (214)
T 1ow0_A 161 RQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALP 200 (214)
T ss_dssp EECSCSSSCCEEEEEEEEEEHHHHHHTCCEEEEEECTTCT
T ss_pred cccccCCCCcEEEEEEEEECHHHccCCCEEEEEEECCCCC
Confidence 122 3455666667777766555688999999997643
No 311
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.10 E-value=1.2e-09 Score=78.28 Aligned_cols=63 Identities=14% Similarity=0.126 Sum_probs=43.6
Q ss_pred eCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEEEE
Q psy16426 69 EGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIK 147 (194)
Q Consensus 69 ~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~ 147 (194)
.+..+.|.|.+...|.|.+.|++ ++..+.. ... .+|.+.. .+|.|.|+|.|.|..+...+...
T Consensus 114 ~~~~v~L~C~~~~gp~p~i~W~~-~~~~l~~--------~~~-----~~l~~~~--~~d~g~Y~C~a~N~~~~~~~~~~ 176 (180)
T 2dru_A 114 ECSNATLTCEVLEGTDVELKLYQ-GKEHLRS--------LRQ-----KTMSYQW--TNLRAPFKCKAVNRVSQESEMEV 176 (180)
T ss_dssp EGGGTEEEEECSSCTTCEEEEEE-TTEEEEE--------ESS-----SEEEEEC--SCCSSCEEEEEEETTEEEEEEEC
T ss_pred cCCCEEEEEEeCCCCCCEEEEEE-CCeECcC--------CCC-----CEEEEEE--hhcCccEEEEEecCcCcccccee
Confidence 45668999999333889999999 4444331 111 2555533 68999999999999987765543
No 312
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.10 E-value=6.2e-10 Score=82.51 Aligned_cols=82 Identities=13% Similarity=0.190 Sum_probs=52.2
Q ss_pred eeCCeEEEEEEeeccCCC--ccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEE
Q psy16426 68 MEGDQMTLECHSEAYPKS--INYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGS 145 (194)
Q Consensus 68 ~~g~~~~l~C~~~~~p~p--~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~ 145 (194)
..|+.+.|.|.+.+.+++ .+.|++++ ..............++.+...+.|.|......| |.|+|.+.|..+.....
T Consensus 145 ~~g~~v~L~C~~~~~~P~~~~v~W~~~g-~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~ytC~v~~~~~~~~~~ 222 (232)
T 3qhz_H 145 TSGGTAALGCLVKDYFPEPVTVSWNSGA-LTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVD 222 (232)
T ss_dssp ---CEEEEEEEEEEEBSSCCEEEEGGGT-BCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEEEE
T ss_pred cCCCcEEEEEEEeeEeCCCeEEEEEECC-EecceeeccceeCCCCCEEEEEEEEEchhhcCC-CEEEEEEEeCCCCccEE
Confidence 457899999999986543 35698844 211100000112234456666789999998888 99999999988777666
Q ss_pred EEEEcc
Q psy16426 146 IKLYGK 151 (194)
Q Consensus 146 ~~l~v~ 151 (194)
..|.+.
T Consensus 223 ~~l~~~ 228 (232)
T 3qhz_H 223 KRVEPK 228 (232)
T ss_dssp EECCCC
T ss_pred EEeCCC
Confidence 665543
No 313
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.09 E-value=1.5e-09 Score=80.71 Aligned_cols=72 Identities=17% Similarity=0.284 Sum_probs=46.0
Q ss_pred eCCeEEEEEEeecc-CCC-ccEEEecCcEEeeCCCcee---EEecCCceeEEEEEEEeecCCCC-CeEEEEEEEcCCCc
Q psy16426 69 EGDQMTLECHSEAY-PKS-INYWTKENGEIIAQGSKYE---PILLDNAYKIHMKLTIKAVTKQD-FGAYKCVSKNSLGD 141 (194)
Q Consensus 69 ~g~~~~l~C~~~~~-p~p-~v~W~~~~~~~~~~~~~~~---~~~~~~~~~~~~~L~i~~~~~~d-~g~y~C~a~n~~g~ 141 (194)
.|+.+.|.|.+.+. |.+ .+.|++ ++..+....... ....++.+...+.|.|......| .|.|+|.+.|....
T Consensus 135 ~g~~~~L~C~~~g~~P~~~~v~W~~-~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~ 212 (238)
T 1bec_A 135 NKQKATLVCLARGFFPDHVELSWWV-NGKEVHSGVSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHGLS 212 (238)
T ss_dssp SSCSCSEEEEEEEEBSCCEEEEEEE-TTEEECTTEEECSSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEEEEECCCC
T ss_pred cCCceEEEEEEeeEeCCCcEEEEEE-CCEECCCceecccceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEcCCCC
Confidence 57889999999986 544 899999 555544332111 11234444555667776554444 67899999997543
No 314
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.09 E-value=6.8e-10 Score=79.81 Aligned_cols=63 Identities=16% Similarity=0.136 Sum_probs=44.6
Q ss_pred CCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEEEEE
Q psy16426 70 GDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKL 148 (194)
Q Consensus 70 g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l 148 (194)
+..+.|.|.+.+.|.+.+.|++ ++..+. . +. ..+.+.. ...|.|.|+|.|.|..+...+...+
T Consensus 115 ~~~v~L~C~~~~~p~~~~~W~~-~g~~l~-~--------~~-----~~i~~~~-~~~d~G~Y~C~a~N~~~~~~s~~~~ 177 (182)
T 1hnf_A 115 CINTTLTCEVMNGTDPELNLYQ-DGKHLK-L--------SQ-----RVITHKW-TTSLSAKFKCTAGNKVSKESSVEPV 177 (182)
T ss_dssp TTTTEEEEECSSCSSCEEEEEE-SSCEEE-E--------ES-----SCEEEEC-CSCEEEEEEEEEECSSCEEEEEEEE
T ss_pred cCcEEEEeEccCCCCCEEEEEE-CCEECC-C--------CC-----cEEEEec-ccCCCcEEEEEEEeCCCCcEEccee
Confidence 4478999999998889999999 444331 1 00 1223322 4689999999999999988776554
No 315
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.08 E-value=2.7e-10 Score=86.24 Aligned_cols=79 Identities=15% Similarity=0.263 Sum_probs=40.1
Q ss_pred eeCCeEEEEEEeecc-CCC-ccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEE
Q psy16426 68 MEGDQMTLECHSEAY-PKS-INYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGS 145 (194)
Q Consensus 68 ~~g~~~~l~C~~~~~-p~p-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~ 145 (194)
..|..+.|.|.+.+. |.| .+.|+++ +..............++.|...+.|.|.+....| |.|+|.+.|........
T Consensus 146 ~~g~~v~L~C~~~g~~P~pi~v~W~k~-g~~~~~~~~~~~~~~~g~y~~~s~L~I~~~~~~~-g~YtC~v~n~~~~~~~~ 223 (257)
T 3bn9_D 146 TSGGTAALGCLVKDYFPEPVTVSWNSG-ALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVD 223 (257)
T ss_dssp -------CCCEEEEEBSSCCEEEETTT-TCCSSCEECCCEECTTSCEEEEEECCCC--------CEEEEEEEGGGTEEEE
T ss_pred cCCCcEEEEEEEeeEECCCcEEEEeeC-CCcCCcEecCCeEcCCCCEEEEEEEEEcccccCC-CeEEEEEEecCCCcCEE
Confidence 367789999999886 666 8999984 4332111000111234445566788888888777 99999999976554444
Q ss_pred EEE
Q psy16426 146 IKL 148 (194)
Q Consensus 146 ~~l 148 (194)
..+
T Consensus 224 ~~i 226 (257)
T 3bn9_D 224 KKV 226 (257)
T ss_dssp EEE
T ss_pred EEE
Confidence 333
No 316
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.07 E-value=1.2e-10 Score=85.49 Aligned_cols=87 Identities=22% Similarity=0.413 Sum_probs=65.2
Q ss_pred ceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeE-EecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCc
Q psy16426 63 QLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEP-ILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGD 141 (194)
Q Consensus 63 ~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~-~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~ 141 (194)
....+.+|+.+.|.|.+.+.|.+.+.|++ ++..+.....+.. ..... ..+|.|.+++..|.|.|+|.+.|..|.
T Consensus 27 ~~~~v~~G~~v~L~C~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~~~n~~~~ 101 (231)
T 3ojm_B 27 RLHAVPAANTVKFRCPAGGNPMPTMRWLK-NGKEFKQEHRIGGYKVRNQ----HWSLIMESVVPSDKGNYTCVVENEYGS 101 (231)
T ss_dssp SCEEEETTSCEEEECCEEEESCCEEEEEE-TTEECCGGGSTTCCEEEGG----GTEEEECSCCGGGCEEEEEEEEETTEE
T ss_pred eeEEEccCCCEEEEEecccCCCCeEEEEE-CCccccccccccceeeecC----cceEEEecCCcccCEEEEEEEecccCc
Confidence 56678899999999999999999999999 5554433222110 11111 238999999999999999999999988
Q ss_pred eEEEEEEEcccCC
Q psy16426 142 TDGSIKLYGKKKK 154 (194)
Q Consensus 142 ~~~~~~l~v~~~p 154 (194)
....+.|.|...+
T Consensus 102 ~~~~~~l~V~~~~ 114 (231)
T 3ojm_B 102 INHTYHLDVVERS 114 (231)
T ss_dssp EEEEEEEEEECCC
T ss_pred ccccEEEEEEcCC
Confidence 8877888776543
No 317
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.07 E-value=8.2e-10 Score=79.03 Aligned_cols=89 Identities=24% Similarity=0.315 Sum_probs=65.8
Q ss_pred eCCeEEeccceeEEee-CCeEEEEEEeeccCC--CccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeE
Q psy16426 54 VPPMIWIQNQLVGAME-GDQMTLECHSEAYPK--SINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGA 130 (194)
Q Consensus 54 ~~p~i~~~~~~~~~~~-g~~~~l~C~~~~~p~--p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~ 130 (194)
.+|.|...+ ...+.+ |+.+.|.|.+.+.+. +.+.|++ ++..+...... .....|.|.++..+|.|.
T Consensus 2 ~~P~i~~~~-~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~-~~~~~~~~~~~---------~~~~~L~i~~~~~~d~G~ 70 (190)
T 2wv3_A 2 NEPRIVTSE-EVIIRDSLLPVTLQCNLTSSSHTLMYSYWTK-NGVELTATRKN---------ASNMEYRINKPRAEDSGE 70 (190)
T ss_dssp -CCEEEECC-CEECCCSSSCEEEEEEEEECSSCEEEEEEEE-TTEECTTCCBC---------CSEEEEEESSCCGGGCEE
T ss_pred CCCcccccc-eEEEccCCceEEEEEEeccCCCCceEEEEEE-CCEECcccceE---------eccEEEEEecCCcccCEE
Confidence 467776544 344555 999999999998876 7889999 55544332211 124699999999999999
Q ss_pred EEEEEEcCCCceEEEEEEEcccCC
Q psy16426 131 YKCVSKNSLGDTDGSIKLYGKKKK 154 (194)
Q Consensus 131 y~C~a~n~~g~~~~~~~l~v~~~p 154 (194)
|+|.+.|. +.....+.|.|...|
T Consensus 71 Y~C~~~n~-~~~~~~~~l~V~~~p 93 (190)
T 2wv3_A 71 YHCVYHFV-SAPKANATIEVKAAP 93 (190)
T ss_dssp EEEEEEET-TEEEEEEEEEEECCC
T ss_pred EEEEEEeC-CcccccEEEEEecCC
Confidence 99999999 777777878776554
No 318
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.06 E-value=1.3e-09 Score=81.60 Aligned_cols=113 Identities=16% Similarity=0.259 Sum_probs=58.5
Q ss_pred eeeeeCCCcEEEEeeeeccCCceeEEEecCceEEEeeCCeEEeccceeEEeeCCeEEEEEEeeccC-----CCccEEEec
Q psy16426 18 LVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQVPPMIWIQNQLVGAMEGDQMTLECHSEAYP-----KSINYWTKE 92 (194)
Q Consensus 18 ~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~v~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p-----~p~v~W~~~ 92 (194)
...+..++...+.|.+.|.....+. +.+..++.+...+..+.+.+|+++.|.|.+.+.+ .+.+.|+++
T Consensus 8 ~~~v~~~dsg~Y~C~a~g~~~~~~~-------~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~ 80 (254)
T 2c1o_A 8 AELVRPGTSVKLSCKASGYSFTNYW-------MNWLRELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQ 80 (254)
T ss_dssp -------------------------------------CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEE
T ss_pred cceecCCccEEEEEcCchhhhhhhh-------hheeeceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEe
Confidence 3457889999999999864322111 1122355666666778889999999999998887 388999974
Q ss_pred C-cEEe----------e--CCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCc
Q psy16426 93 N-GEII----------A--QGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGD 141 (194)
Q Consensus 93 ~-~~~~----------~--~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~ 141 (194)
+ +... . ...++..... ....+|.|.+++.+|.|.|+|.+.|..+.
T Consensus 81 ~~g~~~~~~~~~~~~~~~~~~~r~~~~~~----~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~ 138 (254)
T 2c1o_A 81 RPGQSPKRLIYLVSKLDSGDPDRFTGSGS----GTDFTLKISRVEAEDLGIYYCVQGSHFPP 138 (254)
T ss_dssp CTTSCCEEEEETTTEECTTCCTTEEEEEE----TTEEEEEESSCCGGGCSEEEEEECSSSSC
T ss_pred CCCCCceEEEEeccccCCCccceEEEecC----CCEEEEEECcCCcccCEEEEEEEEcCcce
Confidence 3 2111 0 0123322111 12458999999999999999999998654
No 319
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.06 E-value=1.3e-09 Score=81.90 Aligned_cols=81 Identities=14% Similarity=0.176 Sum_probs=50.7
Q ss_pred eeCCeEEEEEEeeccCC--CccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEE
Q psy16426 68 MEGDQMTLECHSEAYPK--SINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGS 145 (194)
Q Consensus 68 ~~g~~~~l~C~~~~~p~--p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~ 145 (194)
..|..+.|.|.+.+..+ ..+.|++++ ..............++.+...+.|.|......| |.|+|.+.|..+.....
T Consensus 154 ~~g~~~~L~C~~~~~~P~~~~v~W~~~g-~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~ 231 (248)
T 3u2s_H 154 TSGGTAALGCLVKDYFPEPVTVSWNSGA-LTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVD 231 (248)
T ss_dssp ---CEEEEEEEEEEEBSSCCEEEEGGGT-BCTTEEECCCEECTTSCEEEEEEEEEEGGGBTT-BCCEEEEEEGGGTEEEE
T ss_pred cCCCcEEEEEEEeeEECCCeEEEEeECC-ccCceeecCceECCCCCEEEEEEEEEChhhcCC-CeEEEEEEECCCCcceE
Confidence 35788999999988543 457798844 211100000112334556667789999888888 99999999987766555
Q ss_pred EEEEc
Q psy16426 146 IKLYG 150 (194)
Q Consensus 146 ~~l~v 150 (194)
..+.+
T Consensus 232 ~~l~~ 236 (248)
T 3u2s_H 232 KKVEP 236 (248)
T ss_dssp EECCC
T ss_pred EEEcc
Confidence 44433
No 320
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.04 E-value=2e-09 Score=90.31 Aligned_cols=91 Identities=25% Similarity=0.326 Sum_probs=76.1
Q ss_pred CCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEE
Q psy16426 55 PPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCV 134 (194)
Q Consensus 55 ~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~ 134 (194)
.|.+........+.+|+.+.|.|.+.|.|.|.+.|++ ++..+..+.++.....+. ..+|.|.++...|.|.|+|.
T Consensus 482 ~P~~~~~~~~~~v~~G~~~~~~~~v~g~P~P~v~W~k-~~~el~~s~~~~i~~~~~----~~~L~I~~~~~~D~G~Yt~~ 556 (573)
T 3uto_A 482 QPRFIVKPYGTEVGEGQSANFYCRVIASSPPVVTWHK-DDRELKQSVKYMKRYNGN----DYGLTINRVKGDDKGEYTVR 556 (573)
T ss_dssp SCEEEECCCCEEECTTSCEEEEEEEECSSCCEEEEEE-TTEECCSSSSEEEEEETT----EEEEEECSCCGGGCEEEEEE
T ss_pred CCccccCCCCcEEeCCCcEEEEEEEEccCCCeEEEEE-CCEEcccCCcEEEEEcCC----EEEEEEcCCCcccCcEEEEE
Confidence 4556556666778899999999999999999999999 666666666776554443 45899999999999999999
Q ss_pred EEcCCCceEEEEEEEc
Q psy16426 135 SKNSLGDTDGSIKLYG 150 (194)
Q Consensus 135 a~n~~g~~~~~~~l~v 150 (194)
|.|.+|...+.+.|.|
T Consensus 557 A~N~~G~~~~~v~l~V 572 (573)
T 3uto_A 557 AKNSYGTKEEIVFLNV 572 (573)
T ss_dssp EEETTEEEEEEEEEEE
T ss_pred EEeCCCcEEEEEEEEE
Confidence 9999999999998876
No 321
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.04 E-value=9.9e-10 Score=82.51 Aligned_cols=73 Identities=22% Similarity=0.382 Sum_probs=48.4
Q ss_pred eCCeEEEEEEeecc-CC-CccEEEecCcEEeeCCCcee--EE-----ecCCceeEEEEEEEeecCCC-CCeEEEEEEEcC
Q psy16426 69 EGDQMTLECHSEAY-PK-SINYWTKENGEIIAQGSKYE--PI-----LLDNAYKIHMKLTIKAVTKQ-DFGAYKCVSKNS 138 (194)
Q Consensus 69 ~g~~~~l~C~~~~~-p~-p~v~W~~~~~~~~~~~~~~~--~~-----~~~~~~~~~~~L~i~~~~~~-d~g~y~C~a~n~ 138 (194)
.|+.+.|.|.+.+. |. +.+.|++ ++..+....... .. ..++.|...+.|.|...... |.+.|+|.+.|.
T Consensus 137 ~g~~~~L~C~~~g~~P~~~~v~W~~-~g~~l~~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~~~~ytC~v~~~ 215 (252)
T 1oga_E 137 HTQKATLVCLATGFYPDHVELSWWV-NGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFY 215 (252)
T ss_dssp HHSEEEEEEEEEEEBSSCEEEEEEE-TTEEECSSEEECSSCEESCTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEEC
T ss_pred cCCceEEEEEEeeEcCCCcEEEEEE-CCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcC
Confidence 47889999999986 54 3899999 555544321110 00 13344566678888877543 577999999997
Q ss_pred CCce
Q psy16426 139 LGDT 142 (194)
Q Consensus 139 ~g~~ 142 (194)
....
T Consensus 216 ~l~~ 219 (252)
T 1oga_E 216 GLSE 219 (252)
T ss_dssp CBCT
T ss_pred CCCC
Confidence 6544
No 322
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.04 E-value=2.6e-09 Score=77.70 Aligned_cols=86 Identities=16% Similarity=0.201 Sum_probs=63.2
Q ss_pred eEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEE
Q psy16426 65 VGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDG 144 (194)
Q Consensus 65 ~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~ 144 (194)
..+.+|+.+.|.|.+.|.|.|.+.|++..+... .... ..... ...|.|.+++.+|.|.|+|.|.|..|....
T Consensus 11 ~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~--~~~~--~~~~~----~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~ 82 (202)
T 1vca_A 11 YLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPL--NGKV--TNEGT----TSTLTMNPVSFGNEHSYLCTATCESRKLEK 82 (202)
T ss_dssp EEEETTSCEEEEEEEESCSSCEEEEEETTCCCC--SSEE--EEETT----EEEEEESSCCGGGCSEEEEEEEETTEEEEE
T ss_pred EEEcCCCcEEEEEeecCCCCCeEEEECCCCCCc--cceE--EEcCC----ccEEEECcCCHHHCEEEEEEEEECCceEee
Confidence 334589999999999999999999987322211 1111 11111 347999999999999999999999888777
Q ss_pred EEEEEcccCCCCCh
Q psy16426 145 SIKLYGKKKKKKKK 158 (194)
Q Consensus 145 ~~~l~v~~~p~~p~ 158 (194)
.+.|.|...|..+.
T Consensus 83 ~~~l~V~~~p~~~~ 96 (202)
T 1vca_A 83 GIQVEIYSFPKDPE 96 (202)
T ss_dssp EEEEEEEBCCSCCE
T ss_pred EEEEEEEeCCCCCE
Confidence 88888877766543
No 323
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=99.03 E-value=1.9e-09 Score=73.51 Aligned_cols=92 Identities=14% Similarity=0.277 Sum_probs=61.3
Q ss_pred eEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecC-cE---E-eeCCCceeEEecCCceeEEEEEEEeecCCCCCeEE
Q psy16426 57 MIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKEN-GE---I-IAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAY 131 (194)
Q Consensus 57 ~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~-~~---~-~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y 131 (194)
.+...+..+.+.+|+.+.|.|.+.+. +.++|+++. +. . .....++.... ++ ...+|.|.++..+|+|.|
T Consensus 19 ~v~q~p~~~~v~~G~~v~L~C~~~~~--~~v~W~r~~~g~~~~~l~~~~~r~~~~~-~~---~~~~L~I~~~~~~DsG~Y 92 (133)
T 3khq_A 19 QIWQHPRFAAKKRSSMVKFHCYTNHS--GALTWFRKRGSQQPQELVSEEGRIVQTQ-NG---SVYTLTIQNIQYEDNGIY 92 (133)
T ss_dssp SEEEECSEEEECTTCCEEEEEEESSS--SCEEEEEECTTSCCEECCCTTTTEEEEE-ET---TEEEEEECSCCGGGCEEE
T ss_pred ceEEcCceEEEeCCCeEEEEEEeCCC--CEEEEEEeCCCCCCEEEEEeCCCEEEEc-CC---CEEEEEECCCChHHCEEE
Confidence 34555667778899999999999876 889999853 11 1 11334554322 22 146899999999999999
Q ss_pred EEEEEcCCCc----eEEEEEEEcccCC
Q psy16426 132 KCVSKNSLGD----TDGSIKLYGKKKK 154 (194)
Q Consensus 132 ~C~a~n~~g~----~~~~~~l~v~~~p 154 (194)
+|.+.|..|. ......|.|...|
T Consensus 93 ~C~a~n~~g~~~~~~g~gt~L~V~~~p 119 (133)
T 3khq_A 93 FCKQKCDSANHNVTDSCGTELLVLGFS 119 (133)
T ss_dssp EEEESSCC-------CCCEEEEEC---
T ss_pred EEEEEeCCCCcceeECCCEEEEEEecc
Confidence 9999998752 2234567776643
No 324
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.03 E-value=2.6e-10 Score=92.90 Aligned_cols=97 Identities=24% Similarity=0.402 Sum_probs=68.2
Q ss_pred CCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCce-eEEecCCceeEEEEEEEeecCCCCCeEEEE
Q psy16426 55 PPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKY-EPILLDNAYKIHMKLTIKAVTKQDFGAYKC 133 (194)
Q Consensus 55 ~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~-~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C 133 (194)
+|.+...+....+.+|+.+.|.|.+. |.|.++|+++++......... ......+ ++|.|.+++.+|.|.|+|
T Consensus 352 ~P~i~~~~~~~~v~~G~~~~l~C~~~--p~p~i~W~~~~~~~~~~~~~~~~~~~~~~-----g~L~i~~v~~~D~G~Y~C 424 (452)
T 3zyi_A 352 APFIMDAPRDLNISEGRMAELKCRTP--PMSSVKWLLPNGTVLSHASRHPRISVLND-----GTLNFSHVLLSDTGVYTC 424 (452)
T ss_dssp CCCCSBCCCCEECCTTSCCEECCBCC--TTSEEEEECTTSCEECSSCCCSSCEECTT-----SCEECSSCCTTCCEEEEE
T ss_pred CcccccccccccccCCCEEEEEEeCC--CCCcEEEEeCCCcEeccCCCCCCEEECCC-----CeEEEeecCHHHCEEEEE
Confidence 45555555667788999999999987 889999998666554432111 1112222 379999999999999999
Q ss_pred EEEcCCCceEEEEEEEcccCCCCCh
Q psy16426 134 VSKNSLGDTDGSIKLYGKKKKKKKK 158 (194)
Q Consensus 134 ~a~n~~g~~~~~~~l~v~~~p~~p~ 158 (194)
.|.|..|...+++.|.|...+..+.
T Consensus 425 ~a~N~~G~~~~~~~l~v~~~~~~~~ 449 (452)
T 3zyi_A 425 MVTNVAGNSNASAYLNVSTAGTHHH 449 (452)
T ss_dssp EEECSSCEEEEEEEEEC--------
T ss_pred EEEcCCCcEEEEEEEEEEcccccCC
Confidence 9999999999999999987766554
No 325
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.03 E-value=3e-09 Score=78.81 Aligned_cols=82 Identities=15% Similarity=0.288 Sum_probs=53.9
Q ss_pred eeCCeEEEEEEeeccCC--CccEEEecCcEEeeCCCce-eEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEE
Q psy16426 68 MEGDQMTLECHSEAYPK--SINYWTKENGEIIAQGSKY-EPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDG 144 (194)
Q Consensus 68 ~~g~~~~l~C~~~~~p~--p~v~W~~~~~~~~~~~~~~-~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~ 144 (194)
..|..+.|.|.+.+.++ +.+.| . +..+....... .....++.|...+.|.|......| |.|+|.+.+..+....
T Consensus 141 ~~g~~v~L~C~~~~~~P~~~~v~W-~-~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~ 217 (230)
T 3n9g_H 141 TSGGTAALGCLVKDYFPEPVTVSW-N-SGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKV 217 (230)
T ss_dssp CTTCEEEEEEEEEEEBSSCCEEEE-G-GGTBCTTEEECCCEECTTSCEEEEEEEEEESTTBTT-BCCEEEEEEGGGTEEE
T ss_pred cCCCCEEEEEEEEeEECCCEEEEE-C-CcccCCCeEeCCceECCCCCEEEEEEEEECHHHcCC-CeEEEEEEECCCCcce
Confidence 36888999999988543 34778 3 33221100000 012234556667799999998889 9999999998877666
Q ss_pred EEEEEccc
Q psy16426 145 SIKLYGKK 152 (194)
Q Consensus 145 ~~~l~v~~ 152 (194)
...+.+.+
T Consensus 218 ~~~~~v~~ 225 (230)
T 3n9g_H 218 DKRVEPKS 225 (230)
T ss_dssp EEECCCCT
T ss_pred EEEccCCC
Confidence 66665544
No 326
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.02 E-value=5.9e-10 Score=81.32 Aligned_cols=96 Identities=25% Similarity=0.348 Sum_probs=66.5
Q ss_pred eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCC--ceeEEecCCceeEEEEEEEeecCCCCCeEE
Q psy16426 54 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGS--KYEPILLDNAYKIHMKLTIKAVTKQDFGAY 131 (194)
Q Consensus 54 ~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~--~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y 131 (194)
.+|.|...+....+.+|+.+.|.|.+.+.|.+.+.|++ ++....... .......++. ....|.|.++..+|.|.|
T Consensus 8 ~~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~-~g~~~~~~~~~~~~~~~~~~~--~~~~l~i~~v~~~d~G~Y 84 (217)
T 2vr9_A 8 QSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFK-DGEPVSTNEKKSHRVQFKDGA--LFFYRTMQGKKEQDGGEY 84 (217)
T ss_dssp CCCEEEECCCCEEECTTSCEEECCEEECSSCCEEEEEE-TTEECCCSSSSSSEEECTTSC--EEESSCCBSSSCBCCEEE
T ss_pred CCCEEecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEE-CCcCccCCCccceeEEecCCc--eEEEEEeccCCcccCceE
Confidence 47778877778888999999999999998989999999 554443321 1111222221 122447888999999999
Q ss_pred EEEEEcCCCceE-EEEEEEccc
Q psy16426 132 KCVSKNSLGDTD-GSIKLYGKK 152 (194)
Q Consensus 132 ~C~a~n~~g~~~-~~~~l~v~~ 152 (194)
+|.+.|..|... ..+.|.+..
T Consensus 85 ~C~~~n~~g~~~~~~~~l~v~~ 106 (217)
T 2vr9_A 85 WCVAKNRVGQAVSRHASLQIAV 106 (217)
T ss_dssp EEEEEETTEEEECCCEEEEECE
T ss_pred EEEEecCCCccccccceEEEEE
Confidence 999999887653 234444443
No 327
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.01 E-value=2.2e-09 Score=77.66 Aligned_cols=95 Identities=20% Similarity=0.305 Sum_probs=69.2
Q ss_pred CeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEee-----------CCCceeEEecCCceeEEEEEEEeecC
Q psy16426 56 PMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIA-----------QGSKYEPILLDNAYKIHMKLTIKAVT 124 (194)
Q Consensus 56 p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~L~i~~~~ 124 (194)
..+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ...++. .. ...|.|.++.
T Consensus 2 ~~v~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~--~~------~~~L~i~~v~ 73 (212)
T 1f97_A 2 GSVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVT--FS------SSGITFSSVT 73 (212)
T ss_dssp CEEECSCSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEE--EE------TTEEEESCCC
T ss_pred ceEEecCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEE--ee------ceeEEEcccC
Confidence 3455566778889999999999999988899999985443211 111111 11 1489999999
Q ss_pred CCCCeEEEEEEEcCCC--ceEEEEEEEcccCCCCCh
Q psy16426 125 KQDFGAYKCVSKNSLG--DTDGSIKLYGKKKKKKKK 158 (194)
Q Consensus 125 ~~d~g~y~C~a~n~~g--~~~~~~~l~v~~~p~~p~ 158 (194)
.+|.|.|+|.+.|..| .....+.|.|...|..+.
T Consensus 74 ~~D~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~ 109 (212)
T 1f97_A 74 RKDNGEYTCMVSEEGGQNYGEVSIHLTVLVPPSKPT 109 (212)
T ss_dssp GGGCEEEEEEEEETTSSSEEEEEEEEEEEBCCCCCE
T ss_pred cccCeEEEEEEEccCCCcccEEEEEEEEEcCCCCcc
Confidence 9999999999999877 455677788777666543
No 328
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.01 E-value=2.2e-08 Score=72.03 Aligned_cols=120 Identities=12% Similarity=0.119 Sum_probs=75.1
Q ss_pred EEEcCCeeeeeCCCcEEEEeeeeccCCce-eEEEe--------cCce----EE---------------------------
Q psy16426 12 IWIQNQLVGAMEGDQMTLECHSEAYPKSI-NYWTK--------ENGE----II--------------------------- 51 (194)
Q Consensus 12 ~~~~~~~~~v~~G~~v~L~C~~~g~p~~~-v~W~k--------~~~~----l~--------------------------- 51 (194)
+.+.|....|.+|+++.|+|.+.. +.+. +.|.- +.+. +.
T Consensus 2 v~v~P~~~~V~~G~Sv~l~Cs~~c-~~p~~~~~~t~l~~~~~~~~~~~~~~l~l~~vs~~g~y~C~~~c~~~~~~~~~~l 80 (185)
T 1iam_A 2 TSVSPSKVILPRGGSVLVTCSTSC-DQPKLLGIETPLPKKELLLPGNNRKVYELSNVQEDSQPMCYSNCPDGQSTAKTFL 80 (185)
T ss_dssp EEEESSEEEEETTEEEEEEEEECS-SSCSEEEEECSSCEEEECSSSSSEEEEEEEEECSCBCCEEEEECSSCEEEEECEE
T ss_pred eEEECCCcEEeCCCCEEEEEEccC-CCCccceEEeeCCCccEeccCCceeEEEEEecCcCCEEEEEEECCCCceEEEEEE
Confidence 456677788999999999999864 3443 55541 1100 11
Q ss_pred -EeeCC-eEEeccceeEEeeCCeEEEEEEeeccCCC---ccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCC
Q psy16426 52 -AQVPP-MIWIQNQLVGAMEGDQMTLECHSEAYPKS---INYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQ 126 (194)
Q Consensus 52 -v~~~p-~i~~~~~~~~~~~g~~~~l~C~~~~~p~p---~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 126 (194)
|+.+| .+.+......+.+|+.+.|.|.+.+..++ .+.||+ ++..+.... ..... ...+|++.....+
T Consensus 81 ~V~~~P~~v~i~~~~~~~~~G~~~tL~C~v~g~~P~~~l~i~w~k-g~~~l~~~~-----~~~~~--~~~tl~~~~~reD 152 (185)
T 1iam_A 81 TVYWTPERVELAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLR-GEKELKREP-----AVGEP--AEVTTTVLVRRDH 152 (185)
T ss_dssp EEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEE-TTEEEEEEE-----CCTTT--EEEEEEEECCSSC
T ss_pred EEeCCCCCCEEccCCccccCCCcEEEEEEcCCccCCCCcEEEEEe-CCEEccccc-----CCCcc--ccEEEEEeceecc
Confidence 44444 33444444447899999999999985544 368999 554443211 01111 1346776666655
Q ss_pred CCeEEEEEEEcCCC
Q psy16426 127 DFGAYKCVSKNSLG 140 (194)
Q Consensus 127 d~g~y~C~a~n~~g 140 (194)
|..+|+|.|.|..+
T Consensus 153 ~g~~~sC~A~~~l~ 166 (185)
T 1iam_A 153 HGAQFSCRTELDLR 166 (185)
T ss_dssp SSCEEEEEEEEECG
T ss_pred CCCeEEEEEEecCc
Confidence 66699999998876
No 329
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.00 E-value=5.5e-10 Score=80.55 Aligned_cols=92 Identities=17% Similarity=0.277 Sum_probs=63.1
Q ss_pred eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEE
Q psy16426 54 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKC 133 (194)
Q Consensus 54 ~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C 133 (194)
.+|.|...+.. .+.+|+.+.|.|.+.+ +.+.+.|++++..+ ... ... .... .....|.|.+++.+|.|.|+|
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~-~~~-~~~-~~~~---~~~~~L~i~~v~~~D~G~Y~C 75 (196)
T 3p2t_A 4 PKPTLWAEPGS-VISWGNSVTIWCQGTL-EAREYRLDKEESPA-PWD-RQN-PLEP---KNKARFSIPSMTEDYAGRYRC 75 (196)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTSCS-CSE-EEC-CCSS---SSEEEEEESSCCGGGCEEEEE
T ss_pred CCCEEEccCCC-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCC-ccc-ccc-cccC---CceEEEEeccCCcccCceEEE
Confidence 35677766655 6789999999999988 66788999944332 211 000 0110 124689999999999999999
Q ss_pred EEEcCCCc--eEEEEEEEcccC
Q psy16426 134 VSKNSLGD--TDGSIKLYGKKK 153 (194)
Q Consensus 134 ~a~n~~g~--~~~~~~l~v~~~ 153 (194)
.+.|..|. ....+.|.|...
T Consensus 76 ~a~n~~g~~~~s~~~~l~V~~~ 97 (196)
T 3p2t_A 76 YYRSPVGWSQPSDPLELVMTGA 97 (196)
T ss_dssp EEEETTEEBCCCCCEEEEEECS
T ss_pred EEeCCCcccCCCccEEEEecCC
Confidence 99998872 234566666543
No 330
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=99.00 E-value=3e-09 Score=71.15 Aligned_cols=97 Identities=20% Similarity=0.312 Sum_probs=59.9
Q ss_pred EEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCc----E-EeeC--------CCceeEEecCCceeEEEEEEEeecC
Q psy16426 58 IWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENG----E-IIAQ--------GSKYEPILLDNAYKIHMKLTIKAVT 124 (194)
Q Consensus 58 i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~----~-~~~~--------~~~~~~~~~~~~~~~~~~L~i~~~~ 124 (194)
+...+..+.+.+|+++.|.|.+.+.+.+.++|++... . ++.. ..++..... ....+|.|.+++
T Consensus 4 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~g~~~~~li~~~~~~~~~~~~R~~~~~~----~~~~~L~I~~v~ 79 (120)
T 1mqk_L 4 LTQTPVSLSASVGETVTITCRASENIYSYLAWYQQKQGKSPQFLVYNAKTLGEGVPSRFSGSGS----GTQFSLKINSLL 79 (120)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE----TTEEEEEESSCC
T ss_pred eEecCCeEEEcCCCcEEEEEEeCCCCCceEEEEEECCCCCCEEEEEeCCcCCCCCCceEEEecc----CCEEEEEECCCC
Confidence 3445567778999999999999887778899998431 1 1111 123322111 114589999999
Q ss_pred CCCCeEEEEEEEcCC-C-ceEEEEEEEcccCCCCCh
Q psy16426 125 KQDFGAYKCVSKNSL-G-DTDGSIKLYGKKKKKKKK 158 (194)
Q Consensus 125 ~~d~g~y~C~a~n~~-g-~~~~~~~l~v~~~p~~p~ 158 (194)
.+|.|.|.|.+.|.. . .......|.|......|.
T Consensus 80 ~~DsG~Y~C~~~~~~~~~~fg~gt~L~V~~~~~~~~ 115 (120)
T 1mqk_L 80 PEDFGSYYCQHHYGTPPLTFGGGTKLEIKREQKLIS 115 (120)
T ss_dssp GGGCEEEEEEECSSSSSCCBCCCEEEEEC-------
T ss_pred HHHCEEEEEEEEeCCCceEECCCeEEEEecCCCCCc
Confidence 999999999998853 1 122345666655544444
No 331
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=98.99 E-value=6.7e-10 Score=82.23 Aligned_cols=86 Identities=21% Similarity=0.392 Sum_probs=64.3
Q ss_pred ceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCcee-EEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCc
Q psy16426 63 QLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYE-PILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGD 141 (194)
Q Consensus 63 ~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~-~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~ 141 (194)
....+.+|+.+.|.|.+.+.|.+.+.|++ ++..+....... ...... ..+|.|.++...|.|.|+|.+.|..|.
T Consensus 23 ~~~~v~~G~~v~L~C~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~----~~~L~i~~v~~~d~G~Y~C~~~~~~~~ 97 (241)
T 3grw_A 23 KLLAVPAANTVRFRCPAAGNPTPSISWLK-NGREFRGEHRIGGIKLRHQ----QWSLVMESVVPSDRGNYTCVVENKFGS 97 (241)
T ss_dssp CEEEEETTSEEEEECCEECSSCCEEEEEE-TTEECCGGGSTTCCEEEGG----GTEEEECSCCGGGCEEEEEEEEETTEE
T ss_pred cceEEcCCCeEEEEEEecCCCCceeEEEE-CCcccCCCCcccceeeecc----ceEEEEEeCCcccCEEEEEEEeecCCc
Confidence 45678899999999999999989999999 554443222110 011111 238999999999999999999999988
Q ss_pred eEEEEEEEcccC
Q psy16426 142 TDGSIKLYGKKK 153 (194)
Q Consensus 142 ~~~~~~l~v~~~ 153 (194)
....+.|.|...
T Consensus 98 ~~~~~~l~V~~~ 109 (241)
T 3grw_A 98 IRQTYTLDVLER 109 (241)
T ss_dssp EEEEEEEEEECC
T ss_pred eEEEEEEEEecc
Confidence 888877777654
No 332
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=98.98 E-value=5.5e-10 Score=91.35 Aligned_cols=85 Identities=20% Similarity=0.347 Sum_probs=63.4
Q ss_pred cceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCc
Q psy16426 62 NQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGD 141 (194)
Q Consensus 62 ~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~ 141 (194)
+....+.+|+.+.|.|.+.|.|.|.+.|++++................. ++|.|.+++.+|.|.|+|.|.|..|.
T Consensus 392 ~~~~~v~~G~~v~l~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~-----~~L~i~~v~~~d~G~Y~C~a~N~~g~ 466 (477)
T 2id5_A 392 AQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPD-----GTLEVRYAQVQDNGTYLCIAANAGGN 466 (477)
T ss_dssp CEEEEEETTCCEEECCCEEEESCCEEEEECTTSCBC-------CEECTT-----SCEEESSCCSTTCEEEEEEEEETTEE
T ss_pred cccEEEeCCCeEEEEEeccccCCCEEEEEECCccccccCCCceEEeCCC-----CEEEEeeCChHHCEEEEEEEEeCCCc
Confidence 3566788999999999999999999999995544332111111112222 37999999999999999999999999
Q ss_pred eEEEEEEEcc
Q psy16426 142 TDGSIKLYGK 151 (194)
Q Consensus 142 ~~~~~~l~v~ 151 (194)
..+.+.|.|.
T Consensus 467 ~~~~~~l~V~ 476 (477)
T 2id5_A 467 DSMPAHLHVR 476 (477)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEEEEEEe
Confidence 9888888774
No 333
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=98.98 E-value=9.7e-09 Score=84.94 Aligned_cols=74 Identities=14% Similarity=0.129 Sum_probs=52.0
Q ss_pred eeCCeEEEEEEeeccCCC--ccEEEecCcEEeeCCCc--eeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCce
Q psy16426 68 MEGDQMTLECHSEAYPKS--INYWTKENGEIIAQGSK--YEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDT 142 (194)
Q Consensus 68 ~~g~~~~l~C~~~~~p~p--~v~W~~~~~~~~~~~~~--~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~ 142 (194)
..|+.+.|.|.+.++.++ .+.|++ ++........ ......++.|...+.|.|......|.|.|+|.+.|..+..
T Consensus 310 ~~g~~~~L~C~v~g~~P~~~~i~W~k-~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~~~ 387 (512)
T 1zvo_C 310 WLRDKATFTCFVVGSDLKDAHLTWEV-AGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLPP 387 (512)
T ss_pred ccCCceEEEEEEeceECCCeEEEEEE-CCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCCCC
Confidence 368999999999987443 788999 4444331111 1111234446667889999999999999999999987654
No 334
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=98.98 E-value=5.6e-09 Score=71.32 Aligned_cols=94 Identities=17% Similarity=0.237 Sum_probs=62.7
Q ss_pred EeccceeEEeeCCeEEEEEEeeccC---CCccEEEecCcE--Ee--eC------------CCceeEEecCCceeEEEEEE
Q psy16426 59 WIQNQLVGAMEGDQMTLECHSEAYP---KSINYWTKENGE--II--AQ------------GSKYEPILLDNAYKIHMKLT 119 (194)
Q Consensus 59 ~~~~~~~~~~~g~~~~l~C~~~~~p---~p~v~W~~~~~~--~~--~~------------~~~~~~~~~~~~~~~~~~L~ 119 (194)
...+..+.+..|+++.|.|.+.+.+ .+.+.|++++.. .. .. ..++. ...+.......+|.
T Consensus 10 ~~~~~~v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~v~~~~~~~~~~~~~~~~~~~R~~-~~~~~~~~~~~sL~ 88 (139)
T 1pko_A 10 IGPGHPIRALVGDEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTE-LLKESIGEGKVALR 88 (139)
T ss_dssp ECCSSCEEEETTSCEEEEEEEESCCCCTTSEEEEEEC--CCEEEEEETTEECGGGSCSTTTTSEE-EECTTGGGTEEEEE
T ss_pred ECCCCCEEEEeCCCEEEeeEccCCCCCCceEEEEEECCCCceEEEEeCCcccccccCcccCCceE-EccccccCCeEEEE
Confidence 3344567788999999999987644 257889985421 11 00 11221 11111011246899
Q ss_pred EeecCCCCCeEEEEEEEcCCCceEEEEEEEcccC
Q psy16426 120 IKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGKKK 153 (194)
Q Consensus 120 i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~ 153 (194)
|.+++.+|.|.|+|.+.|..+.....+.|.|..+
T Consensus 89 I~~v~~~D~G~Y~C~v~~~~~~~~~~~~L~V~~P 122 (139)
T 1pko_A 89 IQNVRFSDEGGYTCFFRDHSYQEEAAVELKVEDP 122 (139)
T ss_dssp ESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECT
T ss_pred EccCCHHHCEEEEEEEEcCCCceEEEEEEEEecC
Confidence 9999999999999999999887778888888743
No 335
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=98.97 E-value=4.6e-09 Score=76.35 Aligned_cols=80 Identities=20% Similarity=0.298 Sum_probs=57.5
Q ss_pred eEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecC-cE---E-eeC--------CCceeEEecCCceeEEEEEEEeec
Q psy16426 57 MIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKEN-GE---I-IAQ--------GSKYEPILLDNAYKIHMKLTIKAV 123 (194)
Q Consensus 57 ~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~-~~---~-~~~--------~~~~~~~~~~~~~~~~~~L~i~~~ 123 (194)
.+...+..+.+.+|+++.|.|.+.+.+.+.+.|++++ +. . ... ..++..... ....+|.|.++
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~----~~~~~L~I~~v 78 (213)
T 3nl4_L 3 VMTQTPASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGS----GTDFTLTISDL 78 (213)
T ss_dssp CEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE----TTEEEEEECSC
T ss_pred cEEeCCCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecC----CCEEEEEECCC
Confidence 4555566778899999999999999888999999742 11 1 111 123322211 12458999999
Q ss_pred CCCCCeEEEEEEEcCCC
Q psy16426 124 TKQDFGAYKCVSKNSLG 140 (194)
Q Consensus 124 ~~~d~g~y~C~a~n~~g 140 (194)
+.+|.|.|+|.+.|..+
T Consensus 79 ~~~D~G~Y~C~~~~~~~ 95 (213)
T 3nl4_L 79 ECADAATYYCQSTYENP 95 (213)
T ss_dssp CGGGCEEEEEEECCSST
T ss_pred ChHHCEEEEEecCCCCc
Confidence 99999999999999766
No 336
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=98.97 E-value=2.1e-10 Score=88.44 Aligned_cols=141 Identities=13% Similarity=0.049 Sum_probs=31.5
Q ss_pred cccCCe-EEEcCCeeeeeCCCcEEEEeeeecc-CCc--eeEEEecCceEE------------------------------
Q psy16426 6 QNVPPM-IWIQNQLVGAMEGDQMTLECHSEAY-PKS--INYWTKENGEII------------------------------ 51 (194)
Q Consensus 6 v~~~P~-~~~~~~~~~v~~G~~v~L~C~~~g~-p~~--~v~W~k~~~~l~------------------------------ 51 (194)
|+.+|. +.+.+....+.+|+.++|+|.+.+. |.. .|+||+++..+.
T Consensus 82 V~~~P~~v~I~~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~~~~~~~~~~l~~~~~~~D~g~~~~C~A 161 (291)
T 1mq8_A 82 VYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVGEPAEVTTTVLVRRDHHGANFSCRT 161 (291)
T ss_dssp ECBCCSCCCBCCCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEECCBTTEEEEEECCCSSSCSSCEEEEEE
T ss_pred EecCCCCCEEecCCccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeecccCCCCCceEEEEeeeeeccCCceEEEEE
Confidence 444444 3333344558889999999999885 433 589999886543
Q ss_pred ----------------------EeeCCeE-EeccceeEEeeCCeEEEEEEeeccCCC---ccEEEecCcEEeeCCCceeE
Q psy16426 52 ----------------------AQVPPMI-WIQNQLVGAMEGDQMTLECHSEAYPKS---INYWTKENGEIIAQGSKYEP 105 (194)
Q Consensus 52 ----------------------v~~~p~i-~~~~~~~~~~~g~~~~l~C~~~~~p~p---~v~W~~~~~~~~~~~~~~~~ 105 (194)
|+++|.. ........+.+|+.+.|.|.+.|.+++ .++|+. +++......
T Consensus 162 ~~~l~~~g~~l~~~~s~~~~L~V~~~P~~~~~~~~p~~l~eG~~v~l~C~~~g~~P~~~~~v~w~~-~g~~l~~~~---- 236 (291)
T 1mq8_A 162 ELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLAL-GDQRLNPTV---- 236 (291)
T ss_dssp EEECGGGTSCEEEECCCCEECBC---------------------------------------------------------
T ss_pred EecCCccCCccccccccceEEEEEecCCCCceecCCcCccCCCeEEEEEEcCCCCCCcccEEEEEE-CCEecCcee----
Confidence 1111100 000001135679999999999997654 477888 555443211
Q ss_pred EecCCceeEEEEEEEeecCCCC--CeEEEEEEEcCCCceEEEEEEEcccCC
Q psy16426 106 ILLDNAYKIHMKLTIKAVTKQD--FGAYKCVSKNSLGDTDGSIKLYGKKKK 154 (194)
Q Consensus 106 ~~~~~~~~~~~~L~i~~~~~~d--~g~y~C~a~n~~g~~~~~~~l~v~~~p 154 (194)
....+.+ .+++.+. +...+ .+.|.|.+.|..........|.|...|
T Consensus 237 ~~~g~~~--~~~~~~~-~~~~~~~~~~~~C~~~~~~~~~~~~~~l~v~~~~ 284 (291)
T 1mq8_A 237 TYGNDSF--SAKASVS-VTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFP 284 (291)
T ss_dssp ---------------------------------------------------
T ss_pred eecCCeE--EEEEecc-eeEcCCCCEEEEEEEEeCCcceEEEEEEEEEcCC
Confidence 0011111 1122221 12333 456778887754445555666665433
No 337
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=98.97 E-value=4.9e-09 Score=68.53 Aligned_cols=78 Identities=21% Similarity=0.369 Sum_probs=55.3
Q ss_pred EEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCc----E-EeeC--------CCceeEEecCCceeEEEEEEEeecC
Q psy16426 58 IWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENG----E-IIAQ--------GSKYEPILLDNAYKIHMKLTIKAVT 124 (194)
Q Consensus 58 i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~----~-~~~~--------~~~~~~~~~~~~~~~~~~L~i~~~~ 124 (194)
+...+..+.+.+|+++.|.|.+.+.+.+.+.|++.+. . +... ..++.... . ....+|.|.++.
T Consensus 4 v~q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~-~---~~~~~L~I~~v~ 79 (108)
T 1jhl_L 4 LTQSPSYLVASPGETITINCRASKSISKSLAWYQEKPGKTNNLLIYSGSTLQSGIPSRFSGSG-S---GTDFTLTISSLE 79 (108)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-S---SSEEEEEECSCC
T ss_pred eeccCCeeEEcCCCCEEEEeEECCCCCceEEEEEECCCCCCEEEEEcCCCcCCCCCceEEEEe-c---CCEEEEEECCCC
Confidence 3445566778999999999999988888999998431 1 1111 12332211 1 124689999999
Q ss_pred CCCCeEEEEEEEcCC
Q psy16426 125 KQDFGAYKCVSKNSL 139 (194)
Q Consensus 125 ~~d~g~y~C~a~n~~ 139 (194)
.+|+|.|+|.+.|..
T Consensus 80 ~~DsG~Y~C~~~n~~ 94 (108)
T 1jhl_L 80 PEDFAMYICQQHNEY 94 (108)
T ss_dssp TTCCSEEEEEECSSS
T ss_pred HHHCEEEEEEEccCC
Confidence 999999999999864
No 338
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=98.96 E-value=2.4e-09 Score=76.12 Aligned_cols=90 Identities=18% Similarity=0.287 Sum_probs=62.0
Q ss_pred CCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEee-CCCceeEEecCCceeEEEEEEEeecCCCCCeEEEE
Q psy16426 55 PPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIA-QGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKC 133 (194)
Q Consensus 55 ~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~-~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C 133 (194)
+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ...++. .... ++|.|.++..+|.|.|+|
T Consensus 2 ~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~--~~~~-----~~L~i~~~~~~d~G~Y~C 74 (189)
T 2v5t_A 2 MLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFA--MLAN-----NNLQILNINKSDEGIYRC 74 (189)
T ss_dssp CCEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEE--ECTT-----SCEEETTCCGGGCEEEEE
T ss_pred CceeeccCCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEE--EecC-----CCEEEeeCCHhHCcEEEE
Confidence 46666667778889999999999999989899999994433322 122221 2222 379999999999999999
Q ss_pred EEEcCCCceE--EEEEEEcc
Q psy16426 134 VSKNSLGDTD--GSIKLYGK 151 (194)
Q Consensus 134 ~a~n~~g~~~--~~~~l~v~ 151 (194)
.+.|..+... ..+.+.+.
T Consensus 75 ~~~~~~~~~~~~~~~~l~v~ 94 (189)
T 2v5t_A 75 EGRVEARGEIDFRDIIVIVN 94 (189)
T ss_dssp EEEETTTTEEEEEEEEEEEE
T ss_pred EEEEcCCCceEEEEEEEEec
Confidence 9999875543 33444443
No 339
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=98.95 E-value=1.4e-08 Score=76.34 Aligned_cols=81 Identities=16% Similarity=0.293 Sum_probs=51.7
Q ss_pred eeCCeEEEEEEeeccCC--CccEEEecCcEEeeCCCce-eEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEE
Q psy16426 68 MEGDQMTLECHSEAYPK--SINYWTKENGEIIAQGSKY-EPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDG 144 (194)
Q Consensus 68 ~~g~~~~l~C~~~~~p~--p~v~W~~~~~~~~~~~~~~-~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~ 144 (194)
..|+.+.|.|.+.+..+ +.+.| . +.......... .....++.|...+.|.|.....+| |.|+|.+.+..+....
T Consensus 167 ~~g~~v~L~C~~~~~~p~~~~v~W-~-~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-~~ytC~v~~~~~~~~~ 243 (256)
T 3sob_H 167 TSGGTAALGCLVKDYFPEPVTVSW-N-SGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKV 243 (256)
T ss_dssp --TTEEEEEEEEEEEBSSCCEEEE-G-GGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEE
T ss_pred ccCCcEEEEEEEEEEECCCeEEEE-C-CcccCCCeEeCCceeCCCCCEEEEEEEEECHHHcCC-ceEEEEEEeCCCCcce
Confidence 46889999999988543 35778 3 33221100000 112334556667789999998889 9999999998876665
Q ss_pred EEEEEcc
Q psy16426 145 SIKLYGK 151 (194)
Q Consensus 145 ~~~l~v~ 151 (194)
...+.+.
T Consensus 244 ~~~~~~~ 250 (256)
T 3sob_H 244 DKKVEPK 250 (256)
T ss_dssp EEECCCC
T ss_pred EEEeccc
Confidence 5555443
No 340
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=98.94 E-value=6.3e-09 Score=76.90 Aligned_cols=76 Identities=16% Similarity=0.312 Sum_probs=49.2
Q ss_pred eCCeEEEEEEeeccCC--CccEEEecCcEEeeCCCce-eEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEE
Q psy16426 69 EGDQMTLECHSEAYPK--SINYWTKENGEIIAQGSKY-EPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGS 145 (194)
Q Consensus 69 ~g~~~~l~C~~~~~p~--p~v~W~~~~~~~~~~~~~~-~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~ 145 (194)
.|..+.|.|.+.+..+ +.+.| . +.......... .....++.|...+.|.|......| |.|+|.+.|..+.....
T Consensus 143 ~g~~~~l~C~~~~~~p~~~~v~W-~-~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~ 219 (226)
T 3mlr_H 143 SGGTAALGCLVKDYFPEPVTVSW-N-SGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVD 219 (226)
T ss_dssp TSSEEEEEEEEEEEBSSCCEEEE-G-GGTCCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEE
T ss_pred CCCCEEEEEEEEEEECCCeEEEE-C-CccccCCeEeCCcEECCCCCEEEEEEEEECHhHcCC-CeEEEEEEECCCCcCeE
Confidence 6788999999988543 45779 3 32221110000 112344556667799999998888 99999999987665544
Q ss_pred EE
Q psy16426 146 IK 147 (194)
Q Consensus 146 ~~ 147 (194)
..
T Consensus 220 ~~ 221 (226)
T 3mlr_H 220 KK 221 (226)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 341
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=98.94 E-value=6.2e-10 Score=84.74 Aligned_cols=124 Identities=15% Similarity=0.190 Sum_probs=75.2
Q ss_pred CeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceEE--------------------------------------
Q psy16426 10 PMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEII-------------------------------------- 51 (194)
Q Consensus 10 P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l~-------------------------------------- 51 (194)
|.|.....++.+.+|++++|.|.+.+. |.|++++..+.
T Consensus 1 P~i~~~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~ 76 (289)
T 3mjg_X 1 LVVTPPGPELVLNVSSTFVLTCSGSAP----VVWERMSQEPPQEMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSRGL 76 (289)
T ss_dssp CCBCSSCSEEECCTTCCEEEEEEESSC----CEEEBTTBCCSEEEEECTTSCEEEEEEECSCCGGGCEEEEEECCC----
T ss_pred CeecCCCCeEEEeCCCcEEEEEeccce----EEEECCCCCcccceeccCCCceeEEEEEccCChhhCEEEEEEEcccCCC
Confidence 445545566788999999999999875 99999876531
Q ss_pred ---------EeeC-C---eEEeccc--eeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEE
Q psy16426 52 ---------AQVP-P---MIWIQNQ--LVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHM 116 (194)
Q Consensus 52 ---------v~~~-p---~i~~~~~--~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (194)
+... | .+..... ...+.+|+.+.|.|.+. .|.|.+.|++.++..... ..+ .... .
T Consensus 77 ~~~~~~~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~w~~~~~~~~~~-~~~---~~~~-----~ 146 (289)
T 3mjg_X 77 ETDERKRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVT-DPQLVVTLHEKKGDVALP-VPY---DHQR-----G 146 (289)
T ss_dssp --CCCEEEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBS-CTTSCEEEEESSCCSCCC-CCE---ETTT-----E
T ss_pred CcCcEEeEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcC-CCCceEEEEeCCCCCccc-eee---cCCc-----C
Confidence 1000 0 0000001 14467899999999998 677889998743221111 000 1111 0
Q ss_pred EEEEeecCCCCCeEEEEEEEcCCCceEE-EEEEEccc
Q psy16426 117 KLTIKAVTKQDFGAYKCVSKNSLGDTDG-SIKLYGKK 152 (194)
Q Consensus 117 ~L~i~~~~~~d~g~y~C~a~n~~g~~~~-~~~l~v~~ 152 (194)
.+ ...|.|.|+|.+.|..+.... .+.|.+..
T Consensus 147 ~~-----~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~ 178 (289)
T 3mjg_X 147 FS-----GIFEDRSYICKTTIGDREVDSDAYYVYRLQ 178 (289)
T ss_dssp EE-----ECCCSSEEEEEEEETTEEEECCCEEEEECC
T ss_pred ee-----eeccCcEEEEEEEeCCceeeeeeEEEEecC
Confidence 11 256899999999987665443 34555544
No 342
>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}
Probab=98.94 E-value=1.9e-09 Score=72.66 Aligned_cols=91 Identities=21% Similarity=0.278 Sum_probs=60.5
Q ss_pred EeccceeEEeeCCeEEEEEEeeccCC---CccEEEecCcEEe----eC------------CCceeEEecCCceeEEEEEE
Q psy16426 59 WIQNQLVGAMEGDQMTLECHSEAYPK---SINYWTKENGEII----AQ------------GSKYEPILLDNAYKIHMKLT 119 (194)
Q Consensus 59 ~~~~~~~~~~~g~~~~l~C~~~~~p~---p~v~W~~~~~~~~----~~------------~~~~~~~~~~~~~~~~~~L~ 119 (194)
...........|+++.|.|....... ..+.|++.+.... .. ..+.. ...+......++|.
T Consensus 9 t~~~~~v~g~vG~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~R~~-~~~~~~~~g~~sL~ 87 (125)
T 4gos_A 9 TVTTVASAGNIGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTA-VFADQVIVGNASLR 87 (125)
T ss_dssp CEEEECEEEETTSCEEEEEEECCCSCGGGCEEEEEETTCSSBSEEEETTEECCTTBCGGGTTCEE-ECTTTGGGTBCCEE
T ss_pred EccCceEEEeCCCCEEEEEEEcCCcccCcEEEEEEEeccCceEEEEEeecccccccCccccceEE-EecCCccCCeEEEE
Confidence 34445566788999999999754332 2578997432110 00 01111 11111112245899
Q ss_pred EeecCCCCCeEEEEEEEcCCCceEEEEEEEc
Q psy16426 120 IKAVTKQDFGAYKCVSKNSLGDTDGSIKLYG 150 (194)
Q Consensus 120 i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v 150 (194)
|.+++.+|.|.|+|.+.|..|...+.+.|.|
T Consensus 88 I~~v~~~D~G~Y~C~v~~~~g~~~~~v~LkV 118 (125)
T 4gos_A 88 LKNVQLTDAGTYKCYIITSKGKGNANLEYKT 118 (125)
T ss_dssp ESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred ECCCChHHCEEEEEEEEeCCCeEEEEEEEEE
Confidence 9999999999999999999999999999887
No 343
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=98.94 E-value=4.1e-09 Score=77.21 Aligned_cols=85 Identities=21% Similarity=0.262 Sum_probs=64.9
Q ss_pred CCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEE
Q psy16426 55 PPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCV 134 (194)
Q Consensus 55 ~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~ 134 (194)
.+.|...+....+.+|+.+.|.|.+.+.|.+.+.|++ ++....... .+.|.|.++...|.|.|+|.
T Consensus 18 ~~~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~-~~~~~~~~~-------------~~~L~i~~v~~~d~G~Y~C~ 83 (218)
T 3k0w_A 18 GSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFK-MNKEIPNGN-------------TSELIFNAVHVKDAGFYVCR 83 (218)
T ss_dssp -CCEEECCCCEEEETTSBEEEECEETTTTSSEEEEEE-TTEECTTCC-------------SSEEEETTCCGGGCEEEEEE
T ss_pred CCEEEECCCCeEEeCCCcEEEEeeecCCCCCEEEEEE-CCEECCCCC-------------CCEEEEccCChhhCeEeEEE
Confidence 5567777788889999999999999999989999999 444433221 23899999999999999999
Q ss_pred EEcCCCce-EEEEEEEcccC
Q psy16426 135 SKNSLGDT-DGSIKLYGKKK 153 (194)
Q Consensus 135 a~n~~g~~-~~~~~l~v~~~ 153 (194)
+.|..|.. ...+.|.|...
T Consensus 84 ~~n~~~~~~s~~~~l~V~~~ 103 (218)
T 3k0w_A 84 VNNNFTFEFSQWSQLDVCDI 103 (218)
T ss_dssp EECTTCCEECCCEEEEEECC
T ss_pred EEcCCCCceeeEEEEEEEcc
Confidence 99998754 33355555443
No 344
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=98.92 E-value=2.6e-09 Score=84.54 Aligned_cols=83 Identities=19% Similarity=0.272 Sum_probs=65.1
Q ss_pred ceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCC---ceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCC
Q psy16426 63 QLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGS---KYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSL 139 (194)
Q Consensus 63 ~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~---~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~ 139 (194)
..+.+.+|+.+.|.|.+.| |.|.+.|+++++....... ++. . . .++|.|.+++.+|.|.|+|.|.|..
T Consensus 254 ~~v~v~~G~~~~l~C~~~g-p~p~i~W~~~~~~~~~~~~~~~r~~--~-~-----~~~L~I~~v~~~D~G~Y~C~a~N~~ 324 (361)
T 2xot_A 254 SAWEAHLGDTLTIRCDTKQ-QGMTKVWVSPSNEQVLSQGSNGSVS--V-R-----NGDLFFKKVQVEDGGVYTCYAMGET 324 (361)
T ss_dssp CCCEEETTCCEEECCCCSS-TTCEEEEECTTSCBCCSCCSSSSEE--E-E-----TTEEEESSCCTTSCEEEEEEEECSS
T ss_pred cCceecCCCeEEEEeEeeC-CCCeEEEEeCCCeeEeecccCCceE--e-e-----cCeEEEeecCcccCEEEEEEEecCC
Confidence 4567889999999999998 8899999996554433221 222 1 2 2379999999999999999999999
Q ss_pred CceEEEEEEEcccCC
Q psy16426 140 GDTDGSIKLYGKKKK 154 (194)
Q Consensus 140 g~~~~~~~l~v~~~p 154 (194)
|.....+.|.|...+
T Consensus 325 g~~~~~~~l~V~~~~ 339 (361)
T 2xot_A 325 FNETLSVELKVYNFT 339 (361)
T ss_dssp CEEEEEEEEEEESSC
T ss_pred CccEEEEEEEEEeee
Confidence 999988888886543
No 345
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=98.92 E-value=5.1e-09 Score=74.79 Aligned_cols=82 Identities=17% Similarity=0.164 Sum_probs=59.7
Q ss_pred eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEE
Q psy16426 54 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKC 133 (194)
Q Consensus 54 ~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C 133 (194)
.+|.+...+.. .+.+|+++.|.|.+.+ +.+.+.|++++.. . ... ...|.|.+++.+|.|.|+|
T Consensus 7 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~-~---------~~~-----~~~L~i~~v~~~D~G~Y~C 69 (184)
T 2gi7_A 7 PKPSLQALPSS-LVPLEKPVTLRCQGPP-GVDLYRLEKLSSS-R---------YQD-----QAVLFIPAMKRSLAGRYRC 69 (184)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECST-TCSEEEEEETTTC-C---------EES-----SSEEEESSCCGGGCEEEEE
T ss_pred CCCeEEeCCCc-cccCCCcEEEEEeCCC-CCCEEEEEECCcc-c---------cCc-----ccEEEECcCChhhCceEEE
Confidence 46777766554 6889999999999887 6788999994432 0 011 2389999999999999999
Q ss_pred EEEcCCCc--eEEEEEEEccc
Q psy16426 134 VSKNSLGD--TDGSIKLYGKK 152 (194)
Q Consensus 134 ~a~n~~g~--~~~~~~l~v~~ 152 (194)
.+.|..|. ....+.|.|..
T Consensus 70 ~a~n~~g~~~~s~~~~l~V~~ 90 (184)
T 2gi7_A 70 SYQNGSLWSLPSDQLELVATG 90 (184)
T ss_dssp EEEETTEEBCCCCCEEEEEES
T ss_pred EEEcCCCccCCCCCEEEEecC
Confidence 99997753 23345565544
No 346
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=98.92 E-value=2.2e-09 Score=78.37 Aligned_cols=86 Identities=19% Similarity=0.127 Sum_probs=60.4
Q ss_pred eeEEeeCCeEEEEEE---eeccCCCccEEEecCcEEee-------C---------CCceeEEecCCceeEEEEEEEeecC
Q psy16426 64 LVGAMEGDQMTLECH---SEAYPKSINYWTKENGEIIA-------Q---------GSKYEPILLDNAYKIHMKLTIKAVT 124 (194)
Q Consensus 64 ~~~~~~g~~~~l~C~---~~~~p~p~v~W~~~~~~~~~-------~---------~~~~~~~~~~~~~~~~~~L~i~~~~ 124 (194)
.+.+..|+++.|.|. +.+.|.+.+.|++++..... . ...+.. ..+. ....|.|.++.
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~L~I~~v~ 77 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDI-HRSA---NTFFLVVTAAN 77 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEE-EEET---TEEEEEESSCC
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEE-EEcC---CEEEEEEccCC
Confidence 456789999999995 55778899999984321100 0 001110 1111 14589999999
Q ss_pred CCCCeEEEEEEEcCCCceEEEEEEEcccC
Q psy16426 125 KQDFGAYKCVSKNSLGDTDGSIKLYGKKK 153 (194)
Q Consensus 125 ~~d~g~y~C~a~n~~g~~~~~~~l~v~~~ 153 (194)
.+|.|.|+|.+.|..|.....+.|.|..+
T Consensus 78 ~~D~G~Y~C~a~n~~g~~~~~~~l~V~~p 106 (203)
T 4fa8_A 78 ISHDGNYLCRMKLGETEVTKQEHLSVVKP 106 (203)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEEEE
T ss_pred HHHCeEEEEEEEcCCCcEEEEEEEEecCC
Confidence 99999999999999998888888877543
No 347
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=98.92 E-value=7.9e-09 Score=75.09 Aligned_cols=90 Identities=16% Similarity=0.187 Sum_probs=61.4
Q ss_pred EEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCc--E--Ee-e--------CCCceeEEecCCceeEEEEEEEeecC
Q psy16426 58 IWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENG--E--II-A--------QGSKYEPILLDNAYKIHMKLTIKAVT 124 (194)
Q Consensus 58 i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~--~--~~-~--------~~~~~~~~~~~~~~~~~~~L~i~~~~ 124 (194)
+...+ .+.+.+|+.+.|.|.+.+.+.+.+.|++.+. . .. . ...++..... ...++|.|.+++
T Consensus 4 v~~~~-~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~----~~~~~L~I~~v~ 78 (213)
T 3mj8_L 4 LTQPP-LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNS----GNMATLTISKAQ 78 (213)
T ss_dssp BBCCS-EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEE----TTEEEEEESSCC
T ss_pred EEeCC-cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEec----CCEEEEEECCCC
Confidence 33344 6778899999999999988899999997321 1 11 1 1122221111 124689999999
Q ss_pred CCCCeEEEEEEEcCCC---ceEEEEEEEccc
Q psy16426 125 KQDFGAYKCVSKNSLG---DTDGSIKLYGKK 152 (194)
Q Consensus 125 ~~d~g~y~C~a~n~~g---~~~~~~~l~v~~ 152 (194)
.+|.|.|+|.+.|..+ .....+.|.|..
T Consensus 79 ~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~ 109 (213)
T 3mj8_L 79 AGDEADYYCQSWDGTNSAWVFGSGTKVTVLG 109 (213)
T ss_dssp GGGCEEEEEEEEETTTTEEEEBCCEEEEEEC
T ss_pred hhhCEEEEEEeccCCcceeEEcCceEEEEeC
Confidence 9999999999999887 233445666653
No 348
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=98.91 E-value=1.8e-09 Score=78.13 Aligned_cols=98 Identities=24% Similarity=0.404 Sum_probs=65.6
Q ss_pred eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCc---eeEEecCCceeEEEEEEEeecCCCCCeE
Q psy16426 54 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSK---YEPILLDNAYKIHMKLTIKAVTKQDFGA 130 (194)
Q Consensus 54 ~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~---~~~~~~~~~~~~~~~L~i~~~~~~d~g~ 130 (194)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++ ++........ .......+.......|.|.++...|.|.
T Consensus 8 ~pp~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 86 (212)
T 2v9r_A 8 FPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYK-GGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGV 86 (212)
T ss_dssp EEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEE-TTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEE
T ss_pred CCcceecCCCceEEeCCCcEEEEEEcCCCCCCEEEEEE-CCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeE
Confidence 46777777777888999999999999999999999999 4444332211 1111122221112245556778999999
Q ss_pred EEEEEEcCCCceE-EEEEEEccc
Q psy16426 131 YKCVSKNSLGDTD-GSIKLYGKK 152 (194)
Q Consensus 131 y~C~a~n~~g~~~-~~~~l~v~~ 152 (194)
|+|.+.|..|... ..+.|.|..
T Consensus 87 Y~C~~~n~~g~~~~~~~~l~V~~ 109 (212)
T 2v9r_A 87 YVCVARNYLGEAVSHDASLEVAI 109 (212)
T ss_dssp EEEEEEETTEEEECCCEEEEECE
T ss_pred EEEEEECCCCceeecceEEEEEe
Confidence 9999999887652 345555544
No 349
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=98.91 E-value=7.3e-09 Score=73.27 Aligned_cols=80 Identities=23% Similarity=0.415 Sum_probs=60.4
Q ss_pred eCCeEEeccceeEEeeCCeEEEEEEeeccCCCc-cEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEE
Q psy16426 54 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSI-NYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYK 132 (194)
Q Consensus 54 ~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~-v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~ 132 (194)
.+|.+...+....+.+|+.+.|.|.+.+.+.+. +.|++ ++...... .+.|.|.+++.+|.|.|+
T Consensus 6 ~~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~-~~~~~~~~--------------~~~L~i~~~~~~d~G~Y~ 70 (175)
T 1fnl_A 6 PKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFH-NESLISSQ--------------ASSYFIDAATVNDSGEYR 70 (175)
T ss_dssp CCCEEEEESCCSEEETTCCEEEEEECCCBTTBCCCEEEE-TTEEEESS--------------CSEEEESSCCGGGCEEEE
T ss_pred CCCEEEEcCCceeeeCCCcEEEEeeCCCCCCCcceEEEE-CCEEccCC--------------ceEEEEeCCCcccCEEEE
Confidence 356777777766789999999999999988776 67999 44443221 238999999999999999
Q ss_pred EEEEcCCCceEEEEEE
Q psy16426 133 CVSKNSLGDTDGSIKL 148 (194)
Q Consensus 133 C~a~n~~g~~~~~~~l 148 (194)
|.+.|..++....+.+
T Consensus 71 C~~~n~~~s~~~~l~V 86 (175)
T 1fnl_A 71 CQTNLSTLSDPVQLEV 86 (175)
T ss_dssp EECSSSCCCCCEEEEE
T ss_pred EEeeCCcccccEEEEE
Confidence 9999876654444333
No 350
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=98.90 E-value=4.4e-09 Score=76.63 Aligned_cols=80 Identities=24% Similarity=0.434 Sum_probs=60.2
Q ss_pred CCeEEeccceeEEeeCCeEEEEEEeeccCCCc-cEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEE
Q psy16426 55 PPMIWIQNQLVGAMEGDQMTLECHSEAYPKSI-NYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKC 133 (194)
Q Consensus 55 ~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~-v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C 133 (194)
.|.+...+....+.+|+.+.|.|.+.+.+.+. +.|++ ++..+.... ..|.|.+++.+|.|.|+|
T Consensus 7 ~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k-~g~~l~~~~--------------~~L~i~~v~~~D~G~Y~C 71 (204)
T 3sgj_C 7 KAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFH-NESLISSQA--------------SSYFIDAATVDDSGEYRC 71 (204)
T ss_dssp BCEEEEESCCSEEETTCCEEEEEECCSSSSCCCEEEEE-TTEEESCCS--------------SEEEESSCCGGGCEEEEE
T ss_pred CCeEEEcCCCeEEECCCCEEEEEcCCCCCCCcEEEEEE-CCEEcccCc--------------cEEEEecccccCCEEEEE
Confidence 45666666667789999999999999988776 99999 554433221 389999999999999999
Q ss_pred EEEcCCCceEEEEEEEcc
Q psy16426 134 VSKNSLGDTDGSIKLYGK 151 (194)
Q Consensus 134 ~a~n~~g~~~~~~~l~v~ 151 (194)
.+.|...+.. +.|.|.
T Consensus 72 ~a~n~~~s~~--~~l~V~ 87 (204)
T 3sgj_C 72 QTQLSTLSDP--VQLEVH 87 (204)
T ss_dssp EETTSBCCCC--EEEEEE
T ss_pred EeCCCccccc--EEEEEe
Confidence 9998654443 444444
No 351
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=98.90 E-value=1.8e-09 Score=77.93 Aligned_cols=92 Identities=16% Similarity=0.259 Sum_probs=61.9
Q ss_pred eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEE
Q psy16426 54 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKC 133 (194)
Q Consensus 54 ~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C 133 (194)
.+|.|...+.. .+.+|+++.|.|.+.+.+. .+.|++++ ........ . .... .....|.|.++..+|.|.|+|
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~~~~-~~~W~k~g-~~~~~~~~-~-~~~~---~~~~~L~i~~v~~~D~G~Y~C 75 (196)
T 2d3v_A 4 SKATLWAEPGS-VISRGNSVTIRCQGTLEAQ-EYRLVKEG-SPEPWDTQ-N-PLEP---KNKARFSIPSMTEHHAGRYRC 75 (196)
T ss_dssp CBCEEEEESCS-EEETTCCEEEEEECCTTCC-EEEEEETT-CSSCSEEE-C-CCSS---TTEEEEEESSCCGGGCEEEEE
T ss_pred CCCEEEeCCCC-cccCCCeEEEEEeCCCCCc-EEEEEECC-CCCCcccc-c-ccCC---ccccEEEeccCChhHCeEEEE
Confidence 45677766553 6789999999999988654 88899944 33221100 0 0011 124689999999999999999
Q ss_pred EEEcCCCce--EEEEEEEcccC
Q psy16426 134 VSKNSLGDT--DGSIKLYGKKK 153 (194)
Q Consensus 134 ~a~n~~g~~--~~~~~l~v~~~ 153 (194)
.+.|..|.. ...+.|.|...
T Consensus 76 ~a~n~~g~~~~s~~~~l~V~~~ 97 (196)
T 2d3v_A 76 YYYSPAGWSEPSDPLELVVTGF 97 (196)
T ss_dssp EEEETTEECBCCCCEEEEEECS
T ss_pred EEeCCCCcCCcCccEEEEecCC
Confidence 999987643 23456666553
No 352
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=98.90 E-value=1.3e-08 Score=73.87 Aligned_cols=91 Identities=23% Similarity=0.325 Sum_probs=61.4
Q ss_pred EEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCc-EEe----------e--CCCceeEEecCCceeEEEEEEEeecC
Q psy16426 58 IWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENG-EII----------A--QGSKYEPILLDNAYKIHMKLTIKAVT 124 (194)
Q Consensus 58 i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~-~~~----------~--~~~~~~~~~~~~~~~~~~~L~i~~~~ 124 (194)
+...+..+.+.+|+++.|.|.+.+.+.+.+.|++++. ... . ...++.... + ....+|.|.+++
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~---~~~~~L~I~~v~ 79 (213)
T 3d9a_L 4 LTQSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSG-S---GTDFTLSINSVE 79 (213)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE-E---TTEEEEEESSCC
T ss_pred EEeCCccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEc-C---CCEEEEEECCCC
Confidence 3444567778999999999999998888999997432 110 0 012232111 1 114589999999
Q ss_pred CCCCeEEEEEEEcCCCceEE-EEEEEccc
Q psy16426 125 KQDFGAYKCVSKNSLGDTDG-SIKLYGKK 152 (194)
Q Consensus 125 ~~d~g~y~C~a~n~~g~~~~-~~~l~v~~ 152 (194)
.+|.|.|+|.+.|..+.... ...|.|..
T Consensus 80 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~ 108 (213)
T 3d9a_L 80 TEDFGMYFCQQSNSWPYTFGGGTKLEIKR 108 (213)
T ss_dssp GGGCEEEEEEECSSSSCEECCCEEEEECC
T ss_pred hhhCEEEEEeeecCCcceeCCCEEEEEec
Confidence 99999999999998765332 23455544
No 353
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=98.89 E-value=2e-08 Score=73.86 Aligned_cols=94 Identities=20% Similarity=0.203 Sum_probs=62.6
Q ss_pred ccceeEEeeCCeEEEEEEeeccCCC---ccEEEecCcEEee----C------------CCceeEEecCCceeEEEEEEEe
Q psy16426 61 QNQLVGAMEGDQMTLECHSEAYPKS---INYWTKENGEIIA----Q------------GSKYEPILLDNAYKIHMKLTIK 121 (194)
Q Consensus 61 ~~~~~~~~~g~~~~l~C~~~~~p~p---~v~W~~~~~~~~~----~------------~~~~~~~~~~~~~~~~~~L~i~ 121 (194)
+...+.+.+|+++.|.|.+.+.+.+ .+.|++++..... . ..+.. ...........+|.|.
T Consensus 10 P~~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~-~~~~~~~~~~~~L~I~ 88 (226)
T 4f80_A 10 PSGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTS-ILRDGITAGKAALRIH 88 (226)
T ss_dssp CSSCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEE-EECTTGGGTEEEEEES
T ss_pred CCCCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEE-EecccccCCeEEEEEe
Confidence 3455778899999999998776544 5789985432110 0 01111 1111112235689999
Q ss_pred ecCCCCCeEEEEEEEcCCCceEEEEEEEcccCCC
Q psy16426 122 AVTKQDFGAYKCVSKNSLGDTDGSIKLYGKKKKK 155 (194)
Q Consensus 122 ~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~p~ 155 (194)
+++.+|.|.|+|.+.|..|.....+.+.+...+.
T Consensus 89 ~v~~~D~G~Y~C~a~n~~~~~~~~v~~~~~~~~~ 122 (226)
T 4f80_A 89 NVTASDSGKYLCYFQDGDFYEKALVELKVAALGS 122 (226)
T ss_dssp SCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCC
T ss_pred eCchHHCeeEEEEEECCCcEEEEEEEEeecccee
Confidence 9999999999999999988887777766554443
No 354
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=98.88 E-value=3.2e-09 Score=80.51 Aligned_cols=78 Identities=14% Similarity=0.272 Sum_probs=48.0
Q ss_pred eCCeEEEEEEeeccCC--CccEEEecCcEEeeCCCce-eEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEE
Q psy16426 69 EGDQMTLECHSEAYPK--SINYWTKENGEIIAQGSKY-EPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGS 145 (194)
Q Consensus 69 ~g~~~~l~C~~~~~p~--p~v~W~~~~~~~~~~~~~~-~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~ 145 (194)
.|..+.|.|.+.+.++ +.++| . +.......... .....++.|...+.|.|.....+| |.|+|.+.|..+.....
T Consensus 141 ~g~~~~L~C~~~~~~P~~~~v~W-~-~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~ 217 (263)
T 3iu4_H 141 TSGTAALGCLVKDYFPEPVTVSW-N-SGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVD 217 (263)
T ss_dssp ---EEEEEEEEEEEBSSCCEEEE-G-GGTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-CCCEEEEEEGGGTEEEE
T ss_pred cCCcEEEEEEEEeEeCCceEEEE-C-CcccCCceeecCceECCCCCEEEEEEEEECHhHcCC-CEEEEEEEECCCCccee
Confidence 6788999999988643 45889 4 33221100000 112334556667789998887778 99999999987765555
Q ss_pred EEEE
Q psy16426 146 IKLY 149 (194)
Q Consensus 146 ~~l~ 149 (194)
..+.
T Consensus 218 ~~~~ 221 (263)
T 3iu4_H 218 KKVE 221 (263)
T ss_dssp EECC
T ss_pred EEEc
Confidence 4444
No 355
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=98.88 E-value=1.2e-08 Score=74.35 Aligned_cols=91 Identities=12% Similarity=0.175 Sum_probs=60.6
Q ss_pred eEEeccceeEEeeCCeEEEEEEeecc-CCCccEEEecCc-E----EeeCC------------CceeEEecCCceeEEEEE
Q psy16426 57 MIWIQNQLVGAMEGDQMTLECHSEAY-PKSINYWTKENG-E----IIAQG------------SKYEPILLDNAYKIHMKL 118 (194)
Q Consensus 57 ~i~~~~~~~~~~~g~~~~l~C~~~~~-p~p~v~W~~~~~-~----~~~~~------------~~~~~~~~~~~~~~~~~L 118 (194)
.+...+ .+.+.+|+++.|.|.+.+. +.+.+.|++.+. . +.... .++..... ...++|
T Consensus 3 ~v~~~p-~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~----~~~~~L 77 (218)
T 3s96_B 3 VLTQSS-SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSS----GADRYL 77 (218)
T ss_dssp SEECCS-EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEE----TTEEEE
T ss_pred eEEeCC-cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecC----CceEEE
Confidence 344455 6778899999999999998 889999997321 0 00000 12221111 124689
Q ss_pred EEeecCCCCCeEEEEEEEcCCC-----ceEEEEEEEccc
Q psy16426 119 TIKAVTKQDFGAYKCVSKNSLG-----DTDGSIKLYGKK 152 (194)
Q Consensus 119 ~i~~~~~~d~g~y~C~a~n~~g-----~~~~~~~l~v~~ 152 (194)
.|.+++.+|.|.|+|.+.|..| .....+.|.|..
T Consensus 78 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~ 116 (218)
T 3s96_B 78 SISNIQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLG 116 (218)
T ss_dssp EESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEES
T ss_pred EEccCCcccCEEEEEEEecCCCCceeEEEcCcEEEEEec
Confidence 9999999999999999999876 222335566654
No 356
>3rrq_A Protein PD-1, programmed cell death protein 1; programmed death-1, costimulatory, immune system; 2.10A {Homo sapiens}
Probab=98.88 E-value=8.8e-09 Score=69.74 Aligned_cols=97 Identities=13% Similarity=0.221 Sum_probs=61.6
Q ss_pred EeccceeEEeeCCeEEEEEEeeccC-CCccEEEecCc----E-Eee-C--------CCceeEEecCCceeEEEEEEEeec
Q psy16426 59 WIQNQLVGAMEGDQMTLECHSEAYP-KSINYWTKENG----E-IIA-Q--------GSKYEPILLDNAYKIHMKLTIKAV 123 (194)
Q Consensus 59 ~~~~~~~~~~~g~~~~l~C~~~~~p-~p~v~W~~~~~----~-~~~-~--------~~~~~~~~~~~~~~~~~~L~i~~~ 123 (194)
...+..+.+.+|+.+.|.|...+.. ...++|++... . ++. . ..++.... +. .....+|.|.++
T Consensus 5 ~Q~P~~~~v~~G~~vtL~C~~s~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~-~~-~~~~~sL~I~~~ 82 (129)
T 3rrq_A 5 TFSPALLVVTEGDNATFTCSFSNTSESFVLNWYRMSPSNQTDKLAAFPEDRSQPGQDCRFRVTQ-LP-NGRDFHMSVVRA 82 (129)
T ss_dssp EEECSEEEEETTSCEEEEEECCCCC-CEEEEEEEEESTTSCEEEEEETC--------CCEEEEE-CT-TSSEEEEEESSC
T ss_pred EECCCEEEEeCCCCEEEEeEecCCCCCcEEEEeEeCCCCCccEEEEEcCCccCCCcCCcEEEEE-cC-CCCEEEEEECCC
Confidence 3455677889999999999987654 45688986321 1 111 0 11332111 11 112468999999
Q ss_pred CCCCCeEEEEEEEcCCCce----EEEEEEEcccCCCCC
Q psy16426 124 TKQDFGAYKCVSKNSLGDT----DGSIKLYGKKKKKKK 157 (194)
Q Consensus 124 ~~~d~g~y~C~a~n~~g~~----~~~~~l~v~~~p~~p 157 (194)
+.+|+|.|.|.+.|..+.. ...+.|.|...+..|
T Consensus 83 ~~~Dsg~Y~C~~~~~~~~~~~~~s~~~~L~V~~~~~~~ 120 (129)
T 3rrq_A 83 RRNDSGTYLCGAISLAPKLQIKESLRAELRVTERRAEV 120 (129)
T ss_dssp CGGGCEEEEEEEEECGGGCEEEECCCEEEEEECCCC--
T ss_pred ChhHCEEEEEEEEecCCCceeeEeceEEEEEecCcccc
Confidence 9999999999999877654 234667776554433
No 357
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=98.88 E-value=8.7e-09 Score=79.10 Aligned_cols=90 Identities=20% Similarity=0.259 Sum_probs=66.4
Q ss_pred CCeEEeccceeEEeeCCeEEEEEEeecc-CCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEE
Q psy16426 55 PPMIWIQNQLVGAMEGDQMTLECHSEAY-PKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKC 133 (194)
Q Consensus 55 ~p~i~~~~~~~~~~~g~~~~l~C~~~~~-p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C 133 (194)
+|.+... ....+.+|+.+.|.|.+.+. |.+.+.|++ ++..+....++.. .+. ...|.|.++..+|.|.|+|
T Consensus 7 ~P~~~~~-~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~-~~~~~~~~~~~~~--~~~----~~~L~i~~~~~~d~G~Y~C 78 (317)
T 2y25_A 7 GPHFVEY-LSWEVTGECNVLLKCKVANIKKETHIVWYK-DEREISVDEKHDF--KDG----ICTLLITEFSKKDAGIYEV 78 (317)
T ss_dssp CCEEEEE-EEEEEETTTEEEEEEEEESCCTTCEEEEEE-TTEEECCSCC-------C----CEEEEETTCCSTTCSCEEE
T ss_pred CCcEeee-eeEEECCCCeEEEEEEEcCCCCCCEEEEEE-CCeEcCCCCcEEE--ECC----eEEEEEccCCcccCeEEEE
Confidence 5666533 35778899999999999887 678899999 5555544433321 111 3599999999999999999
Q ss_pred EEEcCCCceEEEEEEEccc
Q psy16426 134 VSKNSLGDTDGSIKLYGKK 152 (194)
Q Consensus 134 ~a~n~~g~~~~~~~l~v~~ 152 (194)
.+.|..|.....+.|.+..
T Consensus 79 ~~~n~~g~~~~~~~l~v~~ 97 (317)
T 2y25_A 79 ILKDDRGKDKSRLKLVDEA 97 (317)
T ss_dssp EEESSSCEEEEEECCSTHH
T ss_pred EEECCCCcEEEEEEEEEec
Confidence 9999999877777666543
No 358
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=98.87 E-value=1.3e-08 Score=74.38 Aligned_cols=80 Identities=18% Similarity=0.240 Sum_probs=58.4
Q ss_pred ceeEEeeCCeEEEEEEeec-cCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCc
Q psy16426 63 QLVGAMEGDQMTLECHSEA-YPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGD 141 (194)
Q Consensus 63 ~~~~~~~g~~~~l~C~~~~-~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~ 141 (194)
....+.+|..+.|.|.+.+ .|.|.+.|++ ++..+..+.++.... +.. ....+|.|.++..+|.|.|+|.|.| |.
T Consensus 10 ~~~~v~eg~~v~l~c~~~~~~P~p~i~W~k-ng~~l~~~~~~~~~~-~~~-~g~~~L~I~~v~~~D~G~Y~C~a~N--g~ 84 (207)
T 3rbs_A 10 LAVEILEKGQVRFWMQAEKLSGNAKVNYIF-NEKEIFEGPKYKMHI-DRN-TGIIEMFMEKLQDEDEGTYTFQLQD--GK 84 (207)
T ss_dssp EEEEECGGGCEEEEEECSCCCSCCEEEEEE-TTEEECSSSSCEEEE-CTT-TCEEEEEESCCCGGGCEEEEEEEEE--TT
T ss_pred CceEEEeCCeEEEEEEEecCCCCCEEEEEE-CCEECccCCCEEEEE-eCC-CCEEEEEECCCChhhCEEEEEEEEC--CC
Confidence 4567889999999999864 6889999999 666665555544332 221 1245899999999999999999999 44
Q ss_pred eEEEEE
Q psy16426 142 TDGSIK 147 (194)
Q Consensus 142 ~~~~~~ 147 (194)
......
T Consensus 85 a~~~~~ 90 (207)
T 3rbs_A 85 ATNHST 90 (207)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 444333
No 359
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=98.87 E-value=1.7e-08 Score=73.36 Aligned_cols=90 Identities=19% Similarity=0.214 Sum_probs=60.8
Q ss_pred eEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcE-----Eee--------CCCceeEEecCCceeEEEEEEEeec
Q psy16426 57 MIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGE-----IIA--------QGSKYEPILLDNAYKIHMKLTIKAV 123 (194)
Q Consensus 57 ~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~-----~~~--------~~~~~~~~~~~~~~~~~~~L~i~~~ 123 (194)
.+...+..+.+.+|+.+.|.|.+.+.+.+.+.|++.+.. +.. ...++..... ...++|.|.++
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~----~~~~~L~I~~v 78 (213)
T 3r06_A 3 QMTQSPSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGS----GRDSSFTISSL 78 (213)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE----TTEEEEEESSC
T ss_pred eeEeCCCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEecc----CCEEEEEECCC
Confidence 455556777889999999999999988899999973210 111 1123322111 12458999999
Q ss_pred CCCCCeEEEEEEEcCCCceE-EEEEEEc
Q psy16426 124 TKQDFGAYKCVSKNSLGDTD-GSIKLYG 150 (194)
Q Consensus 124 ~~~d~g~y~C~a~n~~g~~~-~~~~l~v 150 (194)
+.+|.|.|+|.+.|..+... ....|.|
T Consensus 79 ~~~D~G~Y~C~~~~~~~~~~~~~~~l~V 106 (213)
T 3r06_A 79 ESEDIGSYYCQQYYNYPWTFGPGTKLEI 106 (213)
T ss_dssp CGGGCSEEEEEECSSSSCEECCCEEEEE
T ss_pred CcccCEEEEEecccCCceEEcCCceEEE
Confidence 99999999999998764322 2344555
No 360
>1zox_A CLM-1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, structural genomics, PSI, protein structure initiative; 2.10A {Mus musculus}
Probab=98.87 E-value=3.7e-08 Score=64.79 Aligned_cols=92 Identities=14% Similarity=0.147 Sum_probs=61.4
Q ss_pred ccceeEEeeCCeEEEEEEeeccCC-CccEEEecCcE-----EeeC--------CCceeEEecCCceeEEEEEEEeecCCC
Q psy16426 61 QNQLVGAMEGDQMTLECHSEAYPK-SINYWTKENGE-----IIAQ--------GSKYEPILLDNAYKIHMKLTIKAVTKQ 126 (194)
Q Consensus 61 ~~~~~~~~~g~~~~l~C~~~~~p~-p~v~W~~~~~~-----~~~~--------~~~~~~~~~~~~~~~~~~L~i~~~~~~ 126 (194)
.+..+.+.+|+++.|.|...+... ..++|++.... +... ..++..... ......+|.|.+++.+
T Consensus 7 ~p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~--~~~~~~sL~I~~~~~~ 84 (113)
T 1zox_A 7 GPEEVSGQEQGSLTVQCRYTSGWKDYKKYWCQGVPQRSCKTLVETDASEQLVKKNRVSIRDN--QRDFIFTVTMEDLRMS 84 (113)
T ss_dssp CCSEEEEETTSCEEEEEEECGGGTTSCEEEEESSSGGGCEEEEECCSSSCCEEETTEEEEEE--TTTTEEEEEECSCCGG
T ss_pred CCCEEEEeCCCcEEEEeECCCCcccceEEEEeCCCCCCCeEEEEecCccccccCCCEEEEEC--CcCCEEEEEEccCCHH
Confidence 345677889999999999876443 35899985321 1111 112221110 0112468999999999
Q ss_pred CCeEEEEEEEcCCCceEEEEEEEcccCC
Q psy16426 127 DFGAYKCVSKNSLGDTDGSIKLYGKKKK 154 (194)
Q Consensus 127 d~g~y~C~a~n~~g~~~~~~~l~v~~~p 154 (194)
|+|.|.|.+.+........+.|.|.+.|
T Consensus 85 DsG~Y~C~v~~~~~~~~~~v~L~V~~~p 112 (113)
T 1zox_A 85 DAGIYWCGITKGGLDPMFKVTVNIGPVP 112 (113)
T ss_dssp GCEEEEEEECCSSSCCEEEEEEEEECC-
T ss_pred HCEEEEEeeEcCCCCccEEEEEEEEcCC
Confidence 9999999999876566777888887654
No 361
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=98.86 E-value=3.1e-09 Score=75.24 Aligned_cols=81 Identities=19% Similarity=0.375 Sum_probs=58.8
Q ss_pred eeCCeEEeccceeEEeeCCeEEEEEEeeccCCC-ccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEE
Q psy16426 53 QVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKS-INYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAY 131 (194)
Q Consensus 53 ~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y 131 (194)
..+|.+...+....+.+|+.+.|.|.+.+.+.+ .+.|++ ++...... .++|.|.+++.+|.|.|
T Consensus 2 ~~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~-~~~~~~~~--------------~~~L~i~~v~~~d~G~Y 66 (176)
T 1f2q_A 2 PQKPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFH-NGSLSEET--------------NSSLNIVNAKFEDSGEY 66 (176)
T ss_dssp --CCCCEEESSCSEEETTCCEEEECCTTCC----CCEEEE-TTEECSCC--------------SSEEEECSCCGGGCEEE
T ss_pred CCCCEEEcCCCCcceecCCcEEEEEeCCCCCCcceEEEEE-CCeECCCC--------------ceEEEEeccceecCEEE
Confidence 346777777777778999999999999888765 688999 44433211 23899999999999999
Q ss_pred EEEEEcCCCceEEEEEE
Q psy16426 132 KCVSKNSLGDTDGSIKL 148 (194)
Q Consensus 132 ~C~a~n~~g~~~~~~~l 148 (194)
+|.+.|..++....+.+
T Consensus 67 ~C~~~~~~~s~~~~l~V 83 (176)
T 1f2q_A 67 KCQHQQVNESEPVYLEV 83 (176)
T ss_dssp EEECTTSSCCCCEEEEE
T ss_pred EEEcCCccccccEEEEE
Confidence 99999877655544444
No 362
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=98.86 E-value=1.3e-08 Score=78.31 Aligned_cols=136 Identities=12% Similarity=0.093 Sum_probs=78.8
Q ss_pred EEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEe--------cCce----EE----------------------------
Q psy16426 12 IWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTK--------ENGE----II---------------------------- 51 (194)
Q Consensus 12 ~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k--------~~~~----l~---------------------------- 51 (194)
+.+.|..+.+.+|++++|.|.+....+..+.|.- +.+. +.
T Consensus 2 ~~v~P~~~~V~~G~sv~l~Cs~~c~~p~~~~~~t~l~~~~~~~~g~~~~~~~l~~v~~~~~y~C~~~~~~~~~~~~v~l~ 81 (291)
T 1mq8_A 2 TSVSPSKVILPRGGSVLVTCSTSCDQPKLLGIETPLPKKELLLPGNNRKVYELSNVQEDSQPMCYSNCPDGQSTAKTFLT 81 (291)
T ss_dssp EEEECSEEEECTTCEEEEEEEECCSSCSEEEEECSSCCCCCCCSCSSEEEEEEESCCSCCCCEEEEECSSCEEEEECEEE
T ss_pred eEEeCCccEEcCCCeEEEEEeCCCCCCccceEEecCCCcccccCCCceEEEEEEecccCCeEEEEEEcCCccEEEEEEEE
Confidence 4456777899999999999998643333477752 1111 11
Q ss_pred EeeCCe-EEeccceeEEeeCCeEEEEEEeeccCCC---ccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCC
Q psy16426 52 AQVPPM-IWIQNQLVGAMEGDQMTLECHSEAYPKS---INYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQD 127 (194)
Q Consensus 52 v~~~p~-i~~~~~~~~~~~g~~~~l~C~~~~~p~p---~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 127 (194)
|+.+|. +.+......+.+|+.+.|.|.+.+..++ .+.|++++..+.... .... ....+|.+.....+|
T Consensus 82 V~~~P~~v~I~~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~------~~~~--~~~~~l~~~~~~~D~ 153 (291)
T 1mq8_A 82 VYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREP------AVGE--PAEVTTTVLVRRDHH 153 (291)
T ss_dssp ECBCCSCCCBCCCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEE------CCBT--TEEEEEECCCSSSCS
T ss_pred EecCCCCCEEecCCccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeeccc------CCCC--CceEEEEeeeeeccC
Confidence 333332 1122222336789999999999886543 478999443332211 0011 123567777777777
Q ss_pred CeEEEEEEEcCCCc--------eEEEEEEEcccCCC
Q psy16426 128 FGAYKCVSKNSLGD--------TDGSIKLYGKKKKK 155 (194)
Q Consensus 128 ~g~y~C~a~n~~g~--------~~~~~~l~v~~~p~ 155 (194)
.+.|+|.|.|..+. ......|.|...|.
T Consensus 154 g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~ 189 (291)
T 1mq8_A 154 GANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPA 189 (291)
T ss_dssp SCEEEEEEEEECGGGTSCEEEECCCCEECBC-----
T ss_pred CceEEEEEEecCCccCCccccccccceEEEEEecCC
Confidence 77999999987652 13345666666643
No 363
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=98.86 E-value=3.4e-09 Score=75.42 Aligned_cols=88 Identities=18% Similarity=0.233 Sum_probs=60.8
Q ss_pred eeEEeeCCeEEEEEEeec--cCCCccEEEecCcEEe---------eCCCceeEEecCCceeEEEEEEEeecCCCCCeEEE
Q psy16426 64 LVGAMEGDQMTLECHSEA--YPKSINYWTKENGEII---------AQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYK 132 (194)
Q Consensus 64 ~~~~~~g~~~~l~C~~~~--~p~p~v~W~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~ 132 (194)
.+.+.+|+++.|.|...+ .+.+.+.|++++..+. ....++. ... .++|.|.++..+|.|.|+
T Consensus 5 ~v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~--~~~-----~gsL~I~~v~~~D~G~Y~ 77 (176)
T 1hng_A 5 TVWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFE--ILA-----NGDLKIKNLTRDDSGTYN 77 (176)
T ss_dssp EEEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEE--ECT-----TSCEEESSCCGGGCEEEE
T ss_pred EEEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEE--ECC-----CCcEEEcccccccCEEEE
Confidence 456788999999995333 4566899999543322 1122222 111 236999999999999999
Q ss_pred EEEEcCCCce--EEEEEEEcccCCCCCh
Q psy16426 133 CVSKNSLGDT--DGSIKLYGKKKKKKKK 158 (194)
Q Consensus 133 C~a~n~~g~~--~~~~~l~v~~~p~~p~ 158 (194)
|.+.|..|.. ...+.|.|...+..|.
T Consensus 78 C~~~n~~g~~~~~~~~~l~V~~~~~~p~ 105 (176)
T 1hng_A 78 VTVYSTNGTRILNKALDLRILEMVSKPM 105 (176)
T ss_dssp EEEEETTCCEEEEEEEEEEEECCCCCCE
T ss_pred EEEEeCCCCEEEEEEEEEEEeCCCCCCE
Confidence 9999999886 6667787776555443
No 364
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=98.85 E-value=4.6e-09 Score=69.79 Aligned_cols=90 Identities=17% Similarity=0.312 Sum_probs=60.3
Q ss_pred ccceeEEeeCCeEEEEEEeeccCC----CccEEEecCc------EEe-e-C------------CCceeEEecCC-ceeEE
Q psy16426 61 QNQLVGAMEGDQMTLECHSEAYPK----SINYWTKENG------EII-A-Q------------GSKYEPILLDN-AYKIH 115 (194)
Q Consensus 61 ~~~~~~~~~g~~~~l~C~~~~~p~----p~v~W~~~~~------~~~-~-~------------~~~~~~~~~~~-~~~~~ 115 (194)
.+..+.+.+|+++.|.|.+.+.+. +.+.|++.+. ... . . ..+.. .... .....
T Consensus 11 ~~~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~--~~~~~~~~~~ 88 (126)
T 1eaj_A 11 PEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVH--FTSNDLKSGD 88 (126)
T ss_dssp SEEEEEEETTSCEEECCBEECCTTCCSCEEEEEEEEETTSSCCSEEEEEEETTEEECTTSSTTTTTEE--ECCSCGGGTB
T ss_pred CCceEEEEeCCCEEEEEEEecCCCCCCceEEEEEEeCCCcCCCceEEEEEeCCeeccccCccccCeeE--EEcccccCCe
Confidence 445667889999999999877654 3488997431 111 0 0 01111 1111 01113
Q ss_pred EEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEccc
Q psy16426 116 MKLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGKK 152 (194)
Q Consensus 116 ~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~ 152 (194)
.+|.|.+++.+|.|.|+|.+.|..+.....+.|.|..
T Consensus 89 ~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~L~V~~ 125 (126)
T 1eaj_A 89 ASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVVLV 125 (126)
T ss_dssp CCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEECcCChHHCeEEEEEEEcCCccCCcEEEEEEEc
Confidence 5799999999999999999999888777888887753
No 365
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=98.85 E-value=1.7e-08 Score=66.14 Aligned_cols=78 Identities=17% Similarity=0.335 Sum_probs=54.8
Q ss_pred eEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCc----E-EeeC--------CCceeEEecCCceeEEEEEEEeec
Q psy16426 57 MIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENG----E-IIAQ--------GSKYEPILLDNAYKIHMKLTIKAV 123 (194)
Q Consensus 57 ~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~----~-~~~~--------~~~~~~~~~~~~~~~~~~L~i~~~ 123 (194)
.+...+..+.+.+|+++.|.|.+.+.+.+.++|++... . +... ..++.... + ....+|.|.++
T Consensus 5 ~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~-~---~~~~~L~I~~v 80 (109)
T 2q20_A 5 QMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSG-S---GTDFTFTISSL 80 (109)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEE-E---TTEEEEEESSC
T ss_pred cEEeeCCEEEecCCCcEEEEEeeccCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEec-c---CCEEEEEECCC
Confidence 34455667788999999999999887778899998531 1 1111 12332211 1 11458999999
Q ss_pred CCCCCeEEEEEEEcC
Q psy16426 124 TKQDFGAYKCVSKNS 138 (194)
Q Consensus 124 ~~~d~g~y~C~a~n~ 138 (194)
+.+|.|.|.|.+.|.
T Consensus 81 ~~~DsG~Y~C~~~~~ 95 (109)
T 2q20_A 81 QPEDIATYYCQQYDN 95 (109)
T ss_dssp CGGGCEEEEEEECSS
T ss_pred ChhhCEEEEEEEeeC
Confidence 999999999999875
No 366
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A
Probab=98.85 E-value=1.7e-08 Score=67.37 Aligned_cols=78 Identities=15% Similarity=0.265 Sum_probs=54.9
Q ss_pred eEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCc----E-EeeC--------CCceeEEecCCceeEEEEEEEeec
Q psy16426 57 MIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENG----E-IIAQ--------GSKYEPILLDNAYKIHMKLTIKAV 123 (194)
Q Consensus 57 ~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~----~-~~~~--------~~~~~~~~~~~~~~~~~~L~i~~~ 123 (194)
.+...+..+.+.+|+++.|.|.+.+.+.+.++|++... . +... ..++..... ....+|.|.++
T Consensus 5 ~v~q~p~~v~v~~G~~vtL~C~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~----~~~~~L~I~~v 80 (119)
T 2e27_L 5 QMTQSPSSLSASLGGKVTITCKANQDIKKKIAWYQHKPGKGPRLLIYYTSTLKSGISSRFSGSGS----GRDYSFSISNL 80 (119)
T ss_dssp CEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEE----TTEEEEEECSC
T ss_pred eeEecCCeEEEeCCCCEEEEEEeCCCCCceEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEcc----CCEEEEEECCC
Confidence 34455667778999999999999887778899998431 1 1111 123322111 11458999999
Q ss_pred CCCCCeEEEEEEEcC
Q psy16426 124 TKQDFGAYKCVSKNS 138 (194)
Q Consensus 124 ~~~d~g~y~C~a~n~ 138 (194)
+.+|+|.|+|.+.|.
T Consensus 81 ~~~DsG~Y~C~~~~~ 95 (119)
T 2e27_L 81 EPEDAATYYCLQYDN 95 (119)
T ss_dssp CGGGCEEEEEEECGG
T ss_pred ChHHCEEEEEEEccC
Confidence 999999999999875
No 367
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=98.85 E-value=2.2e-09 Score=77.52 Aligned_cols=94 Identities=16% Similarity=0.255 Sum_probs=62.3
Q ss_pred eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEE
Q psy16426 54 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKC 133 (194)
Q Consensus 54 ~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C 133 (194)
.+|.|...+. ..+.+|+++.|.|.+.+.+. .+.|++++..+........ .... ...|.|.++..+|.|.|+|
T Consensus 4 ~~P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~-~~~~-----~~~L~i~~v~~~D~G~Y~C 75 (198)
T 1ugn_A 4 PKPTLWAEPG-SVITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRIPQ-ELVK-----KGQFPIPSITWEHTGRYRC 75 (198)
T ss_dssp CCCEEEEESC-SEEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTSCH-HHHT-----TTEEEESSCCGGGCEEEEE
T ss_pred CCCeEeccCC-CcccCCCcEEEEEEecCCCc-EEEEEECCccccccccccc-cCCc-----ccEEEECCCCHHHCeEEEE
Confidence 3677776655 46789999999999988764 6889994432211100000 0111 2489999999999999999
Q ss_pred EEEcCC-C--ceEEEEEEEcccCCC
Q psy16426 134 VSKNSL-G--DTDGSIKLYGKKKKK 155 (194)
Q Consensus 134 ~a~n~~-g--~~~~~~~l~v~~~p~ 155 (194)
.+.|.. | .....+.|.|...+.
T Consensus 76 ~a~n~~~g~~~~s~~~~l~V~~~~~ 100 (198)
T 1ugn_A 76 YYGSDTAGRSESSDPLELVVTGAYI 100 (198)
T ss_dssp EEEETTTEECCCCCCEEEEEECSSC
T ss_pred EEECCCCCcccCCccEEEEEccccc
Confidence 999987 4 223456666665433
No 368
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=98.85 E-value=3e-08 Score=64.16 Aligned_cols=88 Identities=19% Similarity=0.323 Sum_probs=59.9
Q ss_pred ceeEEeeCCeEEEEEEeec-cCCCccEEEecCcEEeeC---CCc-eeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEc
Q psy16426 63 QLVGAMEGDQMTLECHSEA-YPKSINYWTKENGEIIAQ---GSK-YEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKN 137 (194)
Q Consensus 63 ~~~~~~~g~~~~l~C~~~~-~p~p~v~W~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n 137 (194)
+...+..|+.+.|.|.+.+ .+.|.++|.+.++..... ... ...+...+ .-....|.|.++..+|.|.|+|.|.|
T Consensus 22 S~~tv~~G~~~~LeCpv~yc~~rPnVtWcK~~~~~c~~L~~~~q~~~~w~e~~-n~s~fiL~f~~V~~sDsG~YrCsAn~ 100 (122)
T 1xau_A 22 SKHSAWTGELFKIECPVKYCVHRPNVTWCKHNGTIWVPLEVGPQLYTSWEENR-SVPVFVLHFKPIHLSDNGSYSCSTNF 100 (122)
T ss_dssp EEEEECTTSCEEEEEEEECSSSCCCEEEEEECSSSEEECCCBTTEEEEEECSS-SSCEEEEEETTCCGGGCEEEEEEEEE
T ss_pred ccEEEecCCeEEEEeEecCCCCCCcEEEEecCCeeccccccceeeecceeccC-CceeEEEEEeeEEEcCCccEEEEeeC
Confidence 4556789999999999965 578999999876533221 111 11111111 11245899999999999999999999
Q ss_pred CCCceEEE-EEEEcc
Q psy16426 138 SLGDTDGS-IKLYGK 151 (194)
Q Consensus 138 ~~g~~~~~-~~l~v~ 151 (194)
..|...+. +.|.|.
T Consensus 101 ~~g~ieSHs~ti~V~ 115 (122)
T 1xau_A 101 NSQVINSHSVTIHVR 115 (122)
T ss_dssp TTEEEECCCEEEEEC
T ss_pred CCCceeeeEEEEEEE
Confidence 88876543 445553
No 369
>3bn3_B ICAM-5, intercellular adhesion molecule 5, telencephalin; I domain, integrin, allosteric mobility, cell adhesi immune system; HET: NAG; 2.10A {Homo sapiens}
Probab=98.85 E-value=7.8e-08 Score=69.71 Aligned_cols=126 Identities=13% Similarity=0.115 Sum_probs=74.7
Q ss_pred eEEEcCCeeeeeCCCcEEEEeeeeccCCc-eeEEEecCc-e----------------------EE---------------
Q psy16426 11 MIWIQNQLVGAMEGDQMTLECHSEAYPKS-INYWTKENG-E----------------------II--------------- 51 (194)
Q Consensus 11 ~~~~~~~~~~v~~G~~v~L~C~~~g~p~~-~v~W~k~~~-~----------------------l~--------------- 51 (194)
.+.+.|....|.+|+++.|+|.+.. +.+ .+.|.-.-. . ..
T Consensus 4 ~v~v~P~~~~V~~G~Sv~l~Cs~~c-~~p~~~~~~t~l~~~~~~~g~~~~~~~ls~vs~d~~~~~C~~~c~~~~~~~~v~ 82 (196)
T 3bn3_B 4 WADLQPRVAFVERGGSLWLNCSTNC-PRPERGGLETSLRRNGTQRGLRWLARQLVDIREPETQPVCFFRCARRTLQARGL 82 (196)
T ss_dssp CEEEESSEEEEETTEEEEEEEEECC-SSCSEEEEECSSEEEEEEEETTEEEEEEEEECSSEECCEEEEEETTEEEEEECE
T ss_pred EEEEcCCCcEEcCCCeEEEEEeCCC-CCCCccEEEEccCCeeEccccCceEEEEEEEccCCCceEEEEECCCCceEEEEE
Confidence 4566777888999999999999864 344 556532100 0 00
Q ss_pred --EeeCCe-EEeccceeEEeeCCeEEEEEEeeccCCC-c--cEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCC
Q psy16426 52 --AQVPPM-IWIQNQLVGAMEGDQMTLECHSEAYPKS-I--NYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTK 125 (194)
Q Consensus 52 --v~~~p~-i~~~~~~~~~~~g~~~~l~C~~~~~p~p-~--v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~ 125 (194)
|+.+|. +.+......+.+|+.+.|.|.+.+..++ . +.|++ ++..+.... +. ..........+.+.+.....
T Consensus 83 l~Vy~~P~~v~i~~~~~~~~~G~~~tL~C~v~~~~P~~~L~i~wlk-g~~~l~~~~-~~-~~~~~~~~~t~~~~~~~~r~ 159 (196)
T 3bn3_B 83 IRTFQRPDRVELMPLPPWQPVGENFTLSCRVPGAGPRASLTLTLLR-GAQELIRRS-FA-GEPPRARGAVLTATVLARRE 159 (196)
T ss_dssp EEEEBCCCCCEECCCCSSEETTSEEEEEEEETTCBCGGGEEEEEEE-TTEEEEEEE-CT-TSCTTCCCEEEEEEEECCGG
T ss_pred EEEecCCCcCEEccCCccccCCCcEEEEEEeCCccCCCCcEEEEEe-CCEEeeccc-cc-cccccccceeEEEEEeeeec
Confidence 444442 2222222236789999999999885543 3 68999 554432111 00 00111112335666666666
Q ss_pred CCCeEEEEEEEcCCC
Q psy16426 126 QDFGAYKCVSKNSLG 140 (194)
Q Consensus 126 ~d~g~y~C~a~n~~g 140 (194)
++..+|+|.|.|..+
T Consensus 160 D~g~~~sC~A~l~l~ 174 (196)
T 3bn3_B 160 DHGANFSCRAELDLR 174 (196)
T ss_dssp GTTCEEEEEEEEECG
T ss_pred cCCCeEEEEEEccCC
Confidence 666699999998766
No 370
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=98.84 E-value=6.7e-09 Score=74.87 Aligned_cols=96 Identities=20% Similarity=0.346 Sum_probs=67.5
Q ss_pred CCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEee-----------CCCceeEEecCCceeEEEEEEEeec
Q psy16426 55 PPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIA-----------QGSKYEPILLDNAYKIHMKLTIKAV 123 (194)
Q Consensus 55 ~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~L~i~~~ 123 (194)
+..+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ...++. .. ..+|.|.++
T Consensus 4 ~~~i~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~--~~------~~~L~i~~~ 75 (209)
T 1nbq_A 4 SVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVT--FL------PTGITFKSV 75 (209)
T ss_dssp CCEEECSCSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCE--EE------TTEEECSCC
T ss_pred eEEEEcCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceE--ee------ccEEEEeeC
Confidence 34555666777789999999999999988899999985443211 011111 11 148999999
Q ss_pred CCCCCeEEEEEEEcCCCc--eEEEEEEEcccCCCCCh
Q psy16426 124 TKQDFGAYKCVSKNSLGD--TDGSIKLYGKKKKKKKK 158 (194)
Q Consensus 124 ~~~d~g~y~C~a~n~~g~--~~~~~~l~v~~~p~~p~ 158 (194)
..+|.|.|+|.+.|..|. ....+.|.|...|..+.
T Consensus 76 ~~~d~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~ 112 (209)
T 1nbq_A 76 TREDTGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPT 112 (209)
T ss_dssp CTTSCSEEEEEEEETTSSCEECCEEECCEEBCCCCCC
T ss_pred CHHHCcEEEEEEecCCCCccceEEEEEEEecCCcCCC
Confidence 999999999999998653 34456666666655443
No 371
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=98.81 E-value=3e-08 Score=65.37 Aligned_cols=83 Identities=18% Similarity=0.165 Sum_probs=55.8
Q ss_pred ceeEEeeCCeEEEEEEeeccCCCccEEEecCcE-----Eee-------------CCCceeEEecCCceeEEEEEEEeecC
Q psy16426 63 QLVGAMEGDQMTLECHSEAYPKSINYWTKENGE-----IIA-------------QGSKYEPILLDNAYKIHMKLTIKAVT 124 (194)
Q Consensus 63 ~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~-----~~~-------------~~~~~~~~~~~~~~~~~~~L~i~~~~ 124 (194)
....+.+|+++.|.|.......+.+.|+++... +.. ...+. .... +++|.|.+++
T Consensus 8 ~p~~~~~G~~v~L~~~~~p~~~~~i~W~kg~~~~~~~~I~~y~~~~~~~~~~~~~~gR~--~~~~-----ngSL~I~nvt 80 (111)
T 2qsq_A 8 TPFNVAEGKEVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGRE--IIYP-----NASLLIQNII 80 (111)
T ss_dssp ESSEEETTSCEEEEEESCCSSEEEEEEEESSSCCGGGEEEEEETTTTEEEECTTCCSCE--EECT-----TSCEEECSCC
T ss_pred ccceeccCCCEEEEEeCCCCCceEEEEEeCCCCCCCcEEEEEECCCcceecCcccCCcE--EEec-----CCcEEEccCc
Confidence 345678999999999853323345889984321 110 01122 1122 2489999999
Q ss_pred CCCCeEEEEEEEcCCC-ceEEEEEEEccc
Q psy16426 125 KQDFGAYKCVSKNSLG-DTDGSIKLYGKK 152 (194)
Q Consensus 125 ~~d~g~y~C~a~n~~g-~~~~~~~l~v~~ 152 (194)
.+|.|.|+|.+.+..+ ....++.|.|..
T Consensus 81 ~~D~G~Ytc~v~~~~~~~~~~~~~L~V~~ 109 (111)
T 2qsq_A 81 QNDAGFYTLHVIKSDLVNEEATGQFRVYP 109 (111)
T ss_dssp GGGCEEEEEEEEETTSCCEEEEEEEEEEC
T ss_pred ccCCeEEEEEEEeCCCcEEEEEEEEEEec
Confidence 9999999999999876 467778887754
No 372
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=98.81 E-value=3.3e-08 Score=65.72 Aligned_cols=88 Identities=19% Similarity=0.304 Sum_probs=59.6
Q ss_pred ccceeEEeeCCeEEEEEEeecc--CCCccEEEecCcEEeeC------------CCceeEEecCCceeEEEEEEEeecCCC
Q psy16426 61 QNQLVGAMEGDQMTLECHSEAY--PKSINYWTKENGEIIAQ------------GSKYEPILLDNAYKIHMKLTIKAVTKQ 126 (194)
Q Consensus 61 ~~~~~~~~~g~~~~l~C~~~~~--p~p~v~W~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~L~i~~~~~~ 126 (194)
.+..+.+..|+++.|.|...+. +...+.|++++..+... ..++. ... ..+|.|.+++.+
T Consensus 9 ~~~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~i~~~~~~~~~~~~~~~~~R~~--~~~-----~~sL~I~~v~~~ 81 (117)
T 3q0h_A 9 TTGNISAEKGGSIILQCHLSSTTAQVTQVNWEQQDQLLAICNADLGWHISPSFKDRVA--PGP-----GLGLTLQSLTVN 81 (117)
T ss_dssp ESCCEEEETTCCEEECEEEESCCCEEEEEEEEETTEEEEEEETTTEEECCGGGTTTEE--ECS-----TTCEEECSCCGG
T ss_pred ccCCEEEecCCCEEEEEEecCCCCCEEEEEEEeCCEEEEEEECCCCceeCccccCcEE--eCC-----ceEEEEeeCChh
Confidence 3455678899999999998762 23467899844322111 11111 111 248999999999
Q ss_pred CCeEEEEEEEc-CCCceEEEEEEEcccCCC
Q psy16426 127 DFGAYKCVSKN-SLGDTDGSIKLYGKKKKK 155 (194)
Q Consensus 127 d~g~y~C~a~n-~~g~~~~~~~l~v~~~p~ 155 (194)
|.|.|+|.+.+ ..|.....+.|.|..+|.
T Consensus 82 D~G~Y~C~v~~~~~g~~~~~~~L~V~~pp~ 111 (117)
T 3q0h_A 82 DTGEYFCIYHTYPDGTYTGRIFLEVLESSV 111 (117)
T ss_dssp GCEEEEEEEEEETTCCEEEEEEEEEECC--
T ss_pred hCEEEEEEEEECCCCCeEEEEEEEEEccCc
Confidence 99999999754 568888888888876654
No 373
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A
Probab=98.80 E-value=2.3e-08 Score=65.26 Aligned_cols=77 Identities=16% Similarity=0.346 Sum_probs=53.8
Q ss_pred EEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCc----E-EeeC--------CCceeEEecCCceeEEEEEEEeecC
Q psy16426 58 IWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENG----E-IIAQ--------GSKYEPILLDNAYKIHMKLTIKAVT 124 (194)
Q Consensus 58 i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~----~-~~~~--------~~~~~~~~~~~~~~~~~~L~i~~~~ 124 (194)
+...+..+.+.+|+++.|.|.+.+.+.+.++|++... . +... ..++.... + ....+|.|.+++
T Consensus 4 v~q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~-~---~~~~~L~I~~v~ 79 (107)
T 1i8k_A 4 LTQSPASLSVATGEKVTIRCMTSTDIDDDMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSG-T---GTDFVFTIENTL 79 (107)
T ss_dssp EEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE-E---TTEEEEEESSCC
T ss_pred eEeCCCeEEecCCCCEEEEEEECCCCCCcEEEEEECCCCCCEEEEEecCccCCCCCCCEEEEc-c---CCEEEEEECCCC
Confidence 3445566778899999999999887778899997431 1 1111 12332211 1 124589999999
Q ss_pred CCCCeEEEEEEEcC
Q psy16426 125 KQDFGAYKCVSKNS 138 (194)
Q Consensus 125 ~~d~g~y~C~a~n~ 138 (194)
.+|+|.|.|.+.+.
T Consensus 80 ~~DsG~Y~C~~~~~ 93 (107)
T 1i8k_A 80 SEDVGDYYCLQSFN 93 (107)
T ss_dssp GGGCEEEEEEECSS
T ss_pred HHHCEEEEEEEeeC
Confidence 99999999999875
No 374
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Probab=98.80 E-value=1.8e-08 Score=65.90 Aligned_cols=77 Identities=18% Similarity=0.369 Sum_probs=53.5
Q ss_pred EEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCc----EEee-C--------CCceeEEecCCceeEEEEEEEeecC
Q psy16426 58 IWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENG----EIIA-Q--------GSKYEPILLDNAYKIHMKLTIKAVT 124 (194)
Q Consensus 58 i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~----~~~~-~--------~~~~~~~~~~~~~~~~~~L~i~~~~ 124 (194)
+...+..+.+.+|+++.|.|.+.+.+.+.++|++... ..+. . ..++... . .....+|.|.++.
T Consensus 4 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~-~---~~~~~~L~I~~v~ 79 (108)
T 1qfw_M 4 LTQSPKSMSMSVGERVTLSCKASETVDSFVSWYQQKPEQSPKLLIFGASNRFSGVPDRFTGS-G---SATDFTLTISSVQ 79 (108)
T ss_dssp EEEECSCEECCTTCCEEEEEEESSCCCSCEEEEEECTTSCCEEEECSSSCBCTTCCTTEECC-B---CSSEEEEEESSCC
T ss_pred EEEeCCeEEEcCCCCEEEEeeeCCCCCcEEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEE-c---CCCEEEEEECCCC
Confidence 3445566778899999999999887777899997431 1111 1 1122211 1 1124689999999
Q ss_pred CCCCeEEEEEEEcC
Q psy16426 125 KQDFGAYKCVSKNS 138 (194)
Q Consensus 125 ~~d~g~y~C~a~n~ 138 (194)
.+|+|.|.|.+.+.
T Consensus 80 ~~DsG~Y~C~~~~~ 93 (108)
T 1qfw_M 80 AEDFADYHCGQTYN 93 (108)
T ss_dssp TTCCSEEEEEECSS
T ss_pred hhhCEEEEEEEccC
Confidence 99999999999875
No 375
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=98.80 E-value=3.6e-08 Score=71.52 Aligned_cols=87 Identities=20% Similarity=0.246 Sum_probs=59.2
Q ss_pred cceeEEeeCCeEEEEEEeeccCCCccEEEecCc-EE---ee---------CCCceeEEecCCceeEEEEEEEeecCCCCC
Q psy16426 62 NQLVGAMEGDQMTLECHSEAYPKSINYWTKENG-EI---IA---------QGSKYEPILLDNAYKIHMKLTIKAVTKQDF 128 (194)
Q Consensus 62 ~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~-~~---~~---------~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 128 (194)
+..+.+.+|+++.|.|.+.+.+.+.+.|++++. .. .. ...++..... ....+|.|.+++.+|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~----~~~~~L~I~~v~~~D~ 82 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGS----GTDFTLTIDPVEADDT 82 (210)
T ss_dssp CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE----TTEEEEEESSCCGGGC
T ss_pred CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEec----CCEEEEEECCCCHHHC
Confidence 567778999999999999998888999997431 11 00 0122321111 1145899999999999
Q ss_pred eEEEEEEEcCCCceEE-EEEEEccc
Q psy16426 129 GAYKCVSKNSLGDTDG-SIKLYGKK 152 (194)
Q Consensus 129 g~y~C~a~n~~g~~~~-~~~l~v~~ 152 (194)
|.|+|.+.|..+.... ...|.|..
T Consensus 83 G~Y~C~~~~~~~~~~~~~~~l~V~~ 107 (210)
T 1lk3_L 83 AIYFCQQSWNGPLTFGAGTKLELKR 107 (210)
T ss_dssp EEEEEEECSSSSCEECCCEEEEECC
T ss_pred eEEEEEEEcCCCceeCCCEEEEEcC
Confidence 9999999998764322 23455544
No 376
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=98.80 E-value=1.2e-08 Score=73.78 Aligned_cols=97 Identities=15% Similarity=0.246 Sum_probs=65.5
Q ss_pred ccceeEEeeCCeEEEEEEeeccC----CCccEEEecC---------------cEEeeC-----CCceeEEecCCceeEEE
Q psy16426 61 QNQLVGAMEGDQMTLECHSEAYP----KSINYWTKEN---------------GEIIAQ-----GSKYEPILLDNAYKIHM 116 (194)
Q Consensus 61 ~~~~~~~~~g~~~~l~C~~~~~p----~p~v~W~~~~---------------~~~~~~-----~~~~~~~~~~~~~~~~~ 116 (194)
.+..+.+.+|+.+.|.|.+.+.+ .+.+.|++.+ +..... ..+.. ...+.......
T Consensus 6 ~~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~-~~~~~~~~~~~ 84 (214)
T 3jz7_A 6 PEQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVH-FTSNDVKSGDA 84 (214)
T ss_dssp CEEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEE-ESCSCGGGTBC
T ss_pred CCceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceE-EeccCccCCcc
Confidence 44567788999999999998876 4588898732 111110 11111 00000011235
Q ss_pred EEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEcccCCCCCh
Q psy16426 117 KLTIKAVTKQDFGAYKCVSKNSLGDTDGSIKLYGKKKKKKKK 158 (194)
Q Consensus 117 ~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~p~~p~ 158 (194)
+|.|.+++.+|.|.|+|.+.|..|.....+.|.|...|..+.
T Consensus 85 ~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~ 126 (214)
T 3jz7_A 85 SINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTR 126 (214)
T ss_dssp CEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBSCE
T ss_pred cEEEccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCCce
Confidence 799999999999999999999988888888888877665443
No 377
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=98.80 E-value=1.3e-08 Score=74.89 Aligned_cols=91 Identities=10% Similarity=0.123 Sum_probs=60.7
Q ss_pred eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEE--EEEEeecCCCCCeEE
Q psy16426 54 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHM--KLTIKAVTKQDFGAY 131 (194)
Q Consensus 54 ~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~d~g~y 131 (194)
.+|.|...+. ..+.+|+++.|.|.+.+ +.+.+.|++++..+...... . .. ..... .|.|.+++.+|.|.|
T Consensus 8 ~~P~i~~~p~-~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~~---~-~~--~~~~~~~~L~I~~v~~~D~G~Y 79 (218)
T 1uct_A 8 PMPFISAKSS-PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIGR---R-LK--FWNETDPEFVIDHMDANKAGRY 79 (218)
T ss_dssp CCCCEEESSC-SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEECSE---E-CC------CCCEEEECSCCGGGCEEE
T ss_pred CCCEEEecCC-CccCCCCCEEEEEEcCC-CCCEEEEEECCCcccccccc---c-CC--CCcceeeEEEEcccccccCEEE
Confidence 3567776655 46789999999999876 57789999854333221110 0 00 01123 899999999999999
Q ss_pred EEEEEcCCCceE--EEEEEEccc
Q psy16426 132 KCVSKNSLGDTD--GSIKLYGKK 152 (194)
Q Consensus 132 ~C~a~n~~g~~~--~~~~l~v~~ 152 (194)
+|.+.|..|... ..+.|.|..
T Consensus 80 ~C~a~n~~~~~~~s~~~~l~V~~ 102 (218)
T 1uct_A 80 QCQYRIGHYRFRYSDTLELVVTG 102 (218)
T ss_dssp EEEEEETTTEEEECCCEEEEEEC
T ss_pred EEEEEcCCCceeecCCEEEEEcC
Confidence 999999876332 345666654
No 378
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=98.80 E-value=1.6e-08 Score=66.67 Aligned_cols=81 Identities=19% Similarity=0.350 Sum_probs=54.8
Q ss_pred EEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCc--EE--e-------eCCCceeEEecCCceeEEEEEEEeecCCC
Q psy16426 58 IWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENG--EI--I-------AQGSKYEPILLDNAYKIHMKLTIKAVTKQ 126 (194)
Q Consensus 58 i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~--~~--~-------~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 126 (194)
+...+..+.+.+|+++.|.|.+.+.+ +.++|++... .. + ....++.. ..+.......+|.|.+++.+
T Consensus 4 v~q~p~~~~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~l~~~~~~~~~~~r~~~-~~~~~~~~~~~L~I~~v~~~ 81 (113)
T 1h5b_A 4 VEQSPSALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKS-AFDSERARYSTLHIRDAQLE 81 (113)
T ss_dssp EEEECSEEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCEEEEEEESSSEEEETTEEE-ECCSSSSSEEEEEECSCCGG
T ss_pred eEECCCEEEEecCCcEEEEEEECCCC-ceEEEEEECCCCCeEEEEEECCCCccCCceEE-EEccCCCCEEEEEECCCChh
Confidence 34455677789999999999998754 6799997431 11 1 01123321 11110123568999999999
Q ss_pred CCeEEEEEEEcCCC
Q psy16426 127 DFGAYKCVSKNSLG 140 (194)
Q Consensus 127 d~g~y~C~a~n~~g 140 (194)
|.|.|+|.+.|..|
T Consensus 82 DsG~Y~C~~~n~~~ 95 (113)
T 1h5b_A 82 DSGTYFCAAEASSG 95 (113)
T ss_dssp GCEEEEEEEECSSS
T ss_pred hCEEEEEEEecCCC
Confidence 99999999999765
No 379
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=98.80 E-value=5.2e-08 Score=71.76 Aligned_cols=82 Identities=18% Similarity=0.298 Sum_probs=57.7
Q ss_pred CCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcE-----Eee--------CCCceeEEecCCceeEEEEEEEe
Q psy16426 55 PPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGE-----IIA--------QGSKYEPILLDNAYKIHMKLTIK 121 (194)
Q Consensus 55 ~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~-----~~~--------~~~~~~~~~~~~~~~~~~~L~i~ 121 (194)
.+.+...+....+.+|+++.|.|.+.+.+.+.+.|++.+.. +.. ...++..... ....+|.|.
T Consensus 24 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~----~~~~~L~I~ 99 (237)
T 3sob_L 24 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGS----GTDFTLTIS 99 (237)
T ss_dssp CCCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE----TTEEEEEES
T ss_pred cceEEeCCCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcC----CCEEEEEEC
Confidence 34455556677889999999999999888889999974311 111 1123322211 124689999
Q ss_pred ecCCCCCeEEEEEEEcCCC
Q psy16426 122 AVTKQDFGAYKCVSKNSLG 140 (194)
Q Consensus 122 ~~~~~d~g~y~C~a~n~~g 140 (194)
+++.+|.|.|+|.+.|..+
T Consensus 100 ~v~~~D~G~Y~C~~~~~~~ 118 (237)
T 3sob_L 100 SLQPEDFATYYCQQSYTTP 118 (237)
T ss_dssp SCCGGGCEEEEEEECSSSS
T ss_pred CCChhhCeEEEEeeccCCc
Confidence 9999999999999988765
No 380
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 2.50A {Mus musculus}
Probab=98.80 E-value=6.2e-09 Score=68.69 Aligned_cols=90 Identities=21% Similarity=0.272 Sum_probs=57.7
Q ss_pred cceeEEeeCCeEEEEEEeec-cCCCccEEEecCcE-------Ee-eC--------CCceeEEecCCceeEEEEEEEeecC
Q psy16426 62 NQLVGAMEGDQMTLECHSEA-YPKSINYWTKENGE-------II-AQ--------GSKYEPILLDNAYKIHMKLTIKAVT 124 (194)
Q Consensus 62 ~~~~~~~~g~~~~l~C~~~~-~p~p~v~W~~~~~~-------~~-~~--------~~~~~~~~~~~~~~~~~~L~i~~~~ 124 (194)
+..+.+.+|+++.|.|.... .....+.|++.... +. .. ..++. ..........+|.|.+++
T Consensus 4 ~~~v~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~--~~~~~~~~~~sL~I~~v~ 81 (116)
T 2or8_A 4 YVEVKGVVGHPVTLPCTYSTYRGITTTCWGRGQCPSSACQNTLIWTNGHRVTYQKSSRYN--LKGHISEGDVSLTIENSV 81 (116)
T ss_dssp CEEEEEETTSCEEECCBCCCTTCCCCEEEEESCCCSSSCTTEEEEECSSSEEEESSTTEE--CCSCGGGTBCCEEESSCC
T ss_pred cceEEEEeCCcEEEEEEeeCCCCCcEEEEEEECCCCCCceEEEEEeCCcccCcCCCCeEE--EecCCCCCeEEEEECCCC
Confidence 34567889999999999765 33567899985411 11 01 11221 111111123589999999
Q ss_pred CCCCeEEEEEEEcCCCce--EEEEEEEcccC
Q psy16426 125 KQDFGAYKCVSKNSLGDT--DGSIKLYGKKK 153 (194)
Q Consensus 125 ~~d~g~y~C~a~n~~g~~--~~~~~l~v~~~ 153 (194)
.+|+|.|.|.+.+..+.. ...+.|.|.+.
T Consensus 82 ~~DsG~Y~C~v~~~~~~~~~~~~~~l~V~p~ 112 (116)
T 2or8_A 82 ESDSGLYCCRVEIPGWFNDQKVTFSLQVKPE 112 (116)
T ss_dssp GGGCEEEEEEECCSSTTCCEEEEEEEEEECS
T ss_pred cccCEEEEEEEEcCCcccccEEEEEEEECCc
Confidence 999999999999875443 56677776544
No 381
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=98.80 E-value=2.7e-08 Score=72.98 Aligned_cols=83 Identities=14% Similarity=0.151 Sum_probs=64.0
Q ss_pred eEEeeCCeEEEEEEeeccCCC--ccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCce
Q psy16426 65 VGAMEGDQMTLECHSEAYPKS--INYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDT 142 (194)
Q Consensus 65 ~~~~~g~~~~l~C~~~~~p~p--~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~ 142 (194)
+.+..|+++.|.|.+ +.|.| .+.|++.+..+ .... ... ....|.|.+++.+|.|.|.|.+.|..+..
T Consensus 17 v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l----~~~~--~~~----~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~ 85 (210)
T 1gsm_A 17 VAVALGASRQLTCRL-ACADRGASVQWRGLDTSL----GAVQ--SDT----GRSVLTVRNASLSAAGTRVCVGSCGGRTF 85 (210)
T ss_dssp EEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT----CCEE--EES----SEEEEEECSCCGGGCEEEEEEEEETTEEE
T ss_pred eEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc----CcEE--ecC----CccEEEECccCcccCceEEEEEEeCCCce
Confidence 578899999999999 88878 89999844222 1111 111 14689999999999999999999998887
Q ss_pred EEEEEEEcccCCCCCh
Q psy16426 143 DGSIKLYGKKKKKKKK 158 (194)
Q Consensus 143 ~~~~~l~v~~~p~~p~ 158 (194)
...+.|.|...|..+.
T Consensus 86 ~~~~~ltV~~~P~~~~ 101 (210)
T 1gsm_A 86 QHTVQLLVYAFPNQLT 101 (210)
T ss_dssp EEEEEEEEEBCCSEEE
T ss_pred EEEEEEEEEecCCCcE
Confidence 7788888887776544
No 382
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A
Probab=98.79 E-value=5.5e-08 Score=63.90 Aligned_cols=78 Identities=19% Similarity=0.368 Sum_probs=53.8
Q ss_pred EEeccceeEEeeCCeEEEEEEeecc--CCCccEEEecCc-E----EeeCCCceeEEecCCceeEEEEEEEeecCCCCCeE
Q psy16426 58 IWIQNQLVGAMEGDQMTLECHSEAY--PKSINYWTKENG-E----IIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGA 130 (194)
Q Consensus 58 i~~~~~~~~~~~g~~~~l~C~~~~~--p~p~v~W~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~ 130 (194)
+...+..+.+.+|+++.|.|.+.+. +.+.++|++... . +.....++....... ....+|.|.+++.+|.|.
T Consensus 3 v~q~p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~r~~~~~~~~--~~~~~L~I~~v~~~DsG~ 80 (111)
T 2ywz_A 3 VDQTPRTITKETGESLTIKCVLKDHSCGLSSTTWYRTQLGSTNEKTISIGGRYDETVDKG--SKSFSLRISDLRVEDSGT 80 (111)
T ss_dssp EEEECSEEEECTTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCEECCSBTTEEEEEETT--TTEEEEEECSCCGGGCEE
T ss_pred eEECCCcEEEccCCCEEEEeEECCCCCCCCEEEEEEeCCCCCceEeeEeCCCEEEEEeCC--CCEEEEEECCCChhcCEE
Confidence 4445667788999999999998875 467899997421 1 222223443211111 124689999999999999
Q ss_pred EEEEEEc
Q psy16426 131 YKCVSKN 137 (194)
Q Consensus 131 y~C~a~n 137 (194)
|.|.+.|
T Consensus 81 Y~C~~~~ 87 (111)
T 2ywz_A 81 YKCQADY 87 (111)
T ss_dssp EEEEEEE
T ss_pred EEEEEEc
Confidence 9999998
No 383
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=98.79 E-value=5.3e-08 Score=70.38 Aligned_cols=79 Identities=18% Similarity=0.252 Sum_probs=59.5
Q ss_pred eeCCeEEEEEEeecc-CCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEEE
Q psy16426 68 MEGDQMTLECHSEAY-PKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGSI 146 (194)
Q Consensus 68 ~~g~~~~l~C~~~~~-p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~~ 146 (194)
..++.+.|.|.+.+. |.+.+.|++ ++..+....++....... ...|.|.++..+|.|.|+|.+.|..|.....+
T Consensus 15 c~~~~~~l~C~~~~~~p~~~i~W~~-~g~~i~~~~~~~~~~~~~----~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~ 89 (212)
T 2r15_A 15 STAEGIQLYSFVTYYVEDLKVNWSH-NGSAIRYSDRVKTGVTGE----QIWLQINEPTPNDKGKYVMELFDGKTGHQKTV 89 (212)
T ss_dssp ECSSEEEEEEEBSSCCSSCEEEEEE-TTEECCCCSSEEEEEETT----EEEEEEESCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred EcCceEEEEEEEeccCCCceEEEEE-CCEEccCCCeEEEEEeCC----EEEEEECCCCcccCEEEEEEEecCCcceEEEE
Confidence 356778899998885 478899999 555555544544332222 35799999999999999999999988888777
Q ss_pred EEEcc
Q psy16426 147 KLYGK 151 (194)
Q Consensus 147 ~l~v~ 151 (194)
.|.+.
T Consensus 90 ~l~v~ 94 (212)
T 2r15_A 90 DLSGQ 94 (212)
T ss_dssp EECHH
T ss_pred EEEEe
Confidence 77654
No 384
>4gjt_B Poliovirus receptor-related protein 4; six-bladed -propeller, IGV-like fold, viral entry, MV-H, NEC BETA4/BETA5 groove; HET: NAG; 3.10A {Homo sapiens}
Probab=98.79 E-value=1.9e-08 Score=67.38 Aligned_cols=92 Identities=13% Similarity=0.254 Sum_probs=57.4
Q ss_pred ccceeEEeeCCeEEEEEEeeccCCC---ccEEEecCcEE-----ee-CC-----------CceeEEecCCceeEEEEEEE
Q psy16426 61 QNQLVGAMEGDQMTLECHSEAYPKS---INYWTKENGEI-----IA-QG-----------SKYEPILLDNAYKIHMKLTI 120 (194)
Q Consensus 61 ~~~~~~~~~g~~~~l~C~~~~~p~p---~v~W~~~~~~~-----~~-~~-----------~~~~~~~~~~~~~~~~~L~i 120 (194)
.+..+.+..|+++.|.|...+.+.. .+.|++.+... .. .. .++.. .........++|.|
T Consensus 6 ~p~~vtv~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~-~~~~~~~~~~sL~I 84 (123)
T 4gjt_B 6 TSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQ-PPPPRNPLDGSVLL 84 (123)
T ss_dssp CCSEEECCTTSEEEECCEECCCTTCCEEEEEEEECCCSSCCCEEEEECSSSCCCBCGGGTTTEEC-CCSSCCTTBCCEEE
T ss_pred cCCEEEEEcCCCEEEEEEEeCCccCceeEEEEEEcCCCCCcceeEEEEecCCcEeCccceeEEEE-ecCCCcCCEEEEEE
Confidence 3455677899999999998765433 46798743210 00 00 01110 00110112357999
Q ss_pred eecCCCCCeEEEEEEEc-CCCceEEEEEEEcccC
Q psy16426 121 KAVTKQDFGAYKCVSKN-SLGDTDGSIKLYGKKK 153 (194)
Q Consensus 121 ~~~~~~d~g~y~C~a~n-~~g~~~~~~~l~v~~~ 153 (194)
.+++.+|+|.|+|.+.+ ..|.....+.|.|.++
T Consensus 85 ~~v~~~DsG~Y~C~v~t~~~g~~~~~~~L~VlE~ 118 (123)
T 4gjt_B 85 RNAVQADEGEYECRVSTFPAGSFQARLRLRVLEH 118 (123)
T ss_dssp ESCCSSSCSEEEEEEEESSSCEEEEEEEEEC---
T ss_pred CCCChHHCEEEEEEEEECCCCeEEeEEEEEEEEC
Confidence 99999999999999875 5677788899998765
No 385
>4ffy_L DENV1-E111 single chain variable fragment (light; viral envelope proteins, structural genomics, antibody epito flavivirus, niaid; 2.50A {Mus musculus}
Probab=98.79 E-value=5e-08 Score=65.62 Aligned_cols=94 Identities=21% Similarity=0.294 Sum_probs=60.5
Q ss_pred eEEeccceeEEeeCCeEEEEEEeeccC----CCccEEEecCc----E-EeeC--------CCceeEEecCCceeEEEEEE
Q psy16426 57 MIWIQNQLVGAMEGDQMTLECHSEAYP----KSINYWTKENG----E-IIAQ--------GSKYEPILLDNAYKIHMKLT 119 (194)
Q Consensus 57 ~i~~~~~~~~~~~g~~~~l~C~~~~~p----~p~v~W~~~~~----~-~~~~--------~~~~~~~~~~~~~~~~~~L~ 119 (194)
.+...+..+.+.+|+++.|.|.+.+.+ .+.++|++... . +... ..++..... ....+|.
T Consensus 3 ~v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~----~~~~sL~ 78 (126)
T 4ffy_L 3 VLTQSPASLAVSLGQRATISCRASESVDHYGNSFIYWYQQKPGQPPKLLIYLASNLESGVPARFSGSGS----ETDFTLT 78 (126)
T ss_dssp CEEEECSEEEEETTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEE----TTEEEEE
T ss_pred cEEeCCCeEEEeCCCCEEEEEecCCCcccCCCceEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEecC----CCEEEEE
Confidence 345556677889999999999988765 56789997431 1 1111 123322211 1246899
Q ss_pred EeecCCCCCeEEEEEEEcCCCceE-EEEEEEcccCC
Q psy16426 120 IKAVTKQDFGAYKCVSKNSLGDTD-GSIKLYGKKKK 154 (194)
Q Consensus 120 i~~~~~~d~g~y~C~a~n~~g~~~-~~~~l~v~~~p 154 (194)
|.+++.+|.|.|+|.+.+.....- ....|.|...+
T Consensus 79 I~~v~~~DsG~Y~C~~~~~~~~~fg~gT~L~V~~~g 114 (126)
T 4ffy_L 79 IDSVETDDAATYYCQQNNEDPYTFGGGTKLEIKGGG 114 (126)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCCEEEEEEC--
T ss_pred ECCCCHHHCEEEEEEEecCCCcEECCCEEEEEecCC
Confidence 999999999999999988643222 23566665543
No 386
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=98.79 E-value=2.5e-08 Score=72.13 Aligned_cols=95 Identities=12% Similarity=0.056 Sum_probs=60.4
Q ss_pred eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEE
Q psy16426 54 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKC 133 (194)
Q Consensus 54 ~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C 133 (194)
.+|.|...+. ..+.+|+++.|.|.+.+ +.+.+.|++++..+.... ... .... ......|.|.+++.+|.|.|+|
T Consensus 7 ~~P~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~-~~~-~~~~--~~~~~~l~I~~v~~~D~G~Y~C 80 (201)
T 1nkr_A 7 RKPSLLAHPG-PLVKSEETVILQCWSDV-MFEHFLLHREGMFNDTLR-LIG-EHHD--GVSKANFSISRMTQDLAGTYRC 80 (201)
T ss_dssp CCCEEEEESC-SEEETTCCEEEEEEESS-CCSEEEEEEESSSCEEEE-EEC-EEET--TEEEEEEEESSCCGGGCEEEEE
T ss_pred CCCeEEEEcC-CccCCCCcEEEEEeccC-CCCEEEEEECCCcCCcce-eee-ecCC--CCceEEEEeccCCcccCeEEEE
Confidence 3566766554 56789999999999874 677899998543322110 000 0000 1224689999999999999999
Q ss_pred EEEcCCC-----ceEEEEEEEcccCC
Q psy16426 134 VSKNSLG-----DTDGSIKLYGKKKK 154 (194)
Q Consensus 134 ~a~n~~g-----~~~~~~~l~v~~~p 154 (194)
.+.|... .....+.|.|...+
T Consensus 81 ~a~~~~~~~~~~~~s~~~~l~V~~~~ 106 (201)
T 1nkr_A 81 YGSVTHSPYQVSAPSDPLDIVIIGLY 106 (201)
T ss_dssp EEEBTTBTTCCCCCCCCEEEEEECSS
T ss_pred eEecCCCCccccCCCCCEEEEeeccC
Confidence 9986531 22334556555443
No 387
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=98.78 E-value=1.5e-08 Score=66.47 Aligned_cols=85 Identities=15% Similarity=0.272 Sum_probs=55.0
Q ss_pred eCCeEEeccceeEEeeCCeEEEEEEeeccCCC-----ccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCC
Q psy16426 54 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKS-----INYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDF 128 (194)
Q Consensus 54 ~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p-----~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 128 (194)
.+|.+...+.. .+.+|+.++|.|.+.+.+.. .+.|++ ++..... ... .+.|.|.+++.+|.
T Consensus 7 ~kP~l~~~p~~-~v~~G~~VtL~C~~~~~~~~~~~~~~~~w~k-~g~~l~~-------~~~-----~~~l~i~~v~~~ds 72 (108)
T 4hwn_A 7 PAPILRAVPSA-EPQAGSPMTLSCQTKLPLQRSAARLLFSFYK-DGRIVQS-------RGL-----SSEFQIPTASEDHS 72 (108)
T ss_dssp CCCEEEEESCS-SCBTTCCEEEEEEC---------CCEEEEEE-TTEEEEE-------EES-----CCEEEESSCCGGGC
T ss_pred CCCEEEecCCC-cCCCCCcEEEEEcccCCCCCcCcceEEEEEE-CCcCccC-------CCc-----ccEEEeCccCcccC
Confidence 35666665543 36789999999998765433 378999 5544321 011 24899999999999
Q ss_pred eEEEEEEEcCCCc---eEEEEEEEccc
Q psy16426 129 GAYKCVSKNSLGD---TDGSIKLYGKK 152 (194)
Q Consensus 129 g~y~C~a~n~~g~---~~~~~~l~v~~ 152 (194)
|.|.|.+.|..+. .+..+.|.|..
T Consensus 73 G~Y~C~~~~~~~~~~~~S~~l~L~V~g 99 (108)
T 4hwn_A 73 GSYWCEAATEDNQVWKQSPQLEIRVQG 99 (108)
T ss_dssp EEEEEEEECTTSSSEEECCCEEECCBC
T ss_pred eEEEEEEEeCCCceeccCCCEEEEEEe
Confidence 9999999987652 22346666643
No 388
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=98.78 E-value=1.5e-08 Score=75.15 Aligned_cols=89 Identities=18% Similarity=0.173 Sum_probs=61.1
Q ss_pred eccceeEEeeCCeEEEEEEeec---cCCCccEEEecCcEE----eeC-------------------------CCceeEEe
Q psy16426 60 IQNQLVGAMEGDQMTLECHSEA---YPKSINYWTKENGEI----IAQ-------------------------GSKYEPIL 107 (194)
Q Consensus 60 ~~~~~~~~~~g~~~~l~C~~~~---~p~p~v~W~~~~~~~----~~~-------------------------~~~~~~~~ 107 (194)
..+..+.+.+|+.+.|.|.+.+ .+.+.+.|++++... ... ..+.. .
T Consensus 7 ~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~--~ 84 (250)
T 2fbo_J 7 TTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRAS--V 84 (250)
T ss_dssp CSCSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEE--C
T ss_pred cCCCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEE--e
Confidence 3445677889999999999987 778889999843211 000 00000 0
Q ss_pred cCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCce-----EEEEEEEcccC
Q psy16426 108 LDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDT-----DGSIKLYGKKK 153 (194)
Q Consensus 108 ~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~-----~~~~~l~v~~~ 153 (194)
... ...+|.|.+++.+|.|.|+|.+.|..+.. ...+.|.|...
T Consensus 85 ~~~---~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~ 132 (250)
T 2fbo_J 85 ANL---AAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGH 132 (250)
T ss_dssp SCT---TSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTT
T ss_pred ccC---CcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEecc
Confidence 000 12489999999999999999999987753 45777877765
No 389
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=98.78 E-value=4.3e-09 Score=77.36 Aligned_cols=87 Identities=13% Similarity=0.097 Sum_probs=58.2
Q ss_pred CCeEEeccceeE--EeeCCeEEEEEEeeccC---C-CccEEEecCcEEeeCCCceeE-EecCCceeEEEEEEEeecCCCC
Q psy16426 55 PPMIWIQNQLVG--AMEGDQMTLECHSEAYP---K-SINYWTKENGEIIAQGSKYEP-ILLDNAYKIHMKLTIKAVTKQD 127 (194)
Q Consensus 55 ~p~i~~~~~~~~--~~~g~~~~l~C~~~~~p---~-p~v~W~~~~~~~~~~~~~~~~-~~~~~~~~~~~~L~i~~~~~~d 127 (194)
+|.+...+.... +.+|+++.|.|.+.+.+ . +.+.|++++ ........... ...++.+...+.|.|.++..+|
T Consensus 9 ~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~-~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D 87 (218)
T 2rgs_A 9 GPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNN-VEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWMS 87 (218)
T ss_dssp CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETT-EEECCCEEEEEEETTTTEEEEEEEEECCHHHHHT
T ss_pred CCEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECC-ccccCcccccccccCCCeEEEEEEEEEcHHHcCC
Confidence 455544444333 67899999999998873 3 689999954 43332211111 1122334456789999999999
Q ss_pred CeEEEEEEEcCCCce
Q psy16426 128 FGAYKCVSKNSLGDT 142 (194)
Q Consensus 128 ~g~y~C~a~n~~g~~ 142 (194)
.|.|+|.+.|..+..
T Consensus 88 ~g~Y~C~~~~~~~~~ 102 (218)
T 2rgs_A 88 GKEFKCKVNNKDLPS 102 (218)
T ss_dssp TCCEEEEEEETTCSS
T ss_pred CCeEEEEEECCcCCC
Confidence 999999999987654
No 390
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.78 E-value=1.7e-08 Score=72.32 Aligned_cols=89 Identities=17% Similarity=0.208 Sum_probs=59.4
Q ss_pred CCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeC-CCceeEEecCCceeEEEEEEEeecCCCCCeEEEE
Q psy16426 55 PPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQ-GSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKC 133 (194)
Q Consensus 55 ~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~-~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C 133 (194)
+|.|...+.. .+.+|+++.|.|.+.+. .+.+.|++ ++..... .... .. ......|.|.+++.+|.|.|+|
T Consensus 4 ~P~i~~~p~~-~v~~G~~v~L~C~~~~~-~~~~~w~k-~g~~~~~~~~~~---~~---~~~~~~L~I~~v~~~D~G~Y~C 74 (188)
T 1oll_A 4 KPFIWAEPHF-MVPKEKQVTICCQGNYG-AVEYQLHF-EGSLFAVDRPKP---PE---RINKVKFYIPDMNSRMAGQYSC 74 (188)
T ss_dssp CCEEEEESCS-EEETTCCEEEEEECCTT-CCEEEEEE-TTEEEEEECCSS---CT---TCCEEEEEESSCCGGGCEEEEE
T ss_pred CCEEEeecCC-cCCCCCCEEEEEecCCC-CCEEEEEE-CCCccccccccc---CC---CcceeEEEeCcCCcccCeEEEE
Confidence 5677766655 68899999999998753 46788998 4443321 1000 00 1124689999999999999999
Q ss_pred EEEcCCCce--EEEEEEEccc
Q psy16426 134 VSKNSLGDT--DGSIKLYGKK 152 (194)
Q Consensus 134 ~a~n~~g~~--~~~~~l~v~~ 152 (194)
.+.|..+.. ...+.|.|..
T Consensus 75 ~~~~~~~~~~~s~~~~l~V~~ 95 (188)
T 1oll_A 75 IYRVGELWSEPSNLLDLVVTE 95 (188)
T ss_dssp EEEETTEECCCCCCEEEEEES
T ss_pred EecCCCCCCCCCCceEEEecc
Confidence 998865422 3345565554
No 391
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=98.78 E-value=4.7e-08 Score=64.23 Aligned_cols=90 Identities=19% Similarity=0.288 Sum_probs=57.9
Q ss_pred ceeEEeeCCeEEEEEEee-ccCCCc----cEEEecCcEE---e---------eCCCceeEEecCCce-e--EEEEEEEee
Q psy16426 63 QLVGAMEGDQMTLECHSE-AYPKSI----NYWTKENGEI---I---------AQGSKYEPILLDNAY-K--IHMKLTIKA 122 (194)
Q Consensus 63 ~~~~~~~g~~~~l~C~~~-~~p~p~----v~W~~~~~~~---~---------~~~~~~~~~~~~~~~-~--~~~~L~i~~ 122 (194)
..+.+.+|+++.|.|.+. +.+.+. +.|++.+... . ....+.. ...... . ...+|.|.+
T Consensus 8 ~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~--~~~~~~~~~~~~~sL~I~~ 85 (118)
T 3udw_C 8 TQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLE--FVAARLGAELRNASLRMFG 85 (118)
T ss_dssp SEEEEETTSCEEECCEEECCTTCCCEEEEEEEEETTCSBCSEEEETTTEEEETTCSSEE--ETTCCTTSCCCBCCEEECS
T ss_pred CeEEEeeCCcEEEEEEeECCCCCCCceEEEEEEEcCCCceEEEEeCCCCCccCCcCcEE--EecccccCCCCCcEEEEee
Confidence 346788999999999984 444443 8899842110 0 0011111 111100 0 145899999
Q ss_pred cCCCCCeEEEEEEEc-CCCceEEEEEEEcccCC
Q psy16426 123 VTKQDFGAYKCVSKN-SLGDTDGSIKLYGKKKK 154 (194)
Q Consensus 123 ~~~~d~g~y~C~a~n-~~g~~~~~~~l~v~~~p 154 (194)
++.+|.|.|+|.+.+ ..+.....+.|.|...|
T Consensus 86 v~~~D~G~Y~C~v~~~~~~~~~~~~~L~V~~~P 118 (118)
T 3udw_C 86 LRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKP 118 (118)
T ss_dssp CCGGGCEEEEEEEEEETTEEEEEEEEEEEEC--
T ss_pred cChHHCeEEEEEEEECCCCCccceEEEEEEeCC
Confidence 999999999999998 77777778888876543
No 392
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=98.77 E-value=2.8e-08 Score=72.07 Aligned_cols=82 Identities=17% Similarity=0.242 Sum_probs=56.6
Q ss_pred eeEEeeCCeEEEEEEeeccCCCccEEEecC-c-EE--ee---------CCCceeEEecCCceeEEEEEEEeecCCCCCeE
Q psy16426 64 LVGAMEGDQMTLECHSEAYPKSINYWTKEN-G-EI--IA---------QGSKYEPILLDNAYKIHMKLTIKAVTKQDFGA 130 (194)
Q Consensus 64 ~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~-~-~~--~~---------~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~ 130 (194)
.+.+.+|+++.|.|.+. +.+.+.|++.+ + .. .. ...++..... ...++|.|.+++.+|.|.
T Consensus 9 ~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~----~~~~~L~I~~v~~~D~G~ 82 (211)
T 3tv3_L 9 SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKS----GNTASLTVSGLQTDDEAV 82 (211)
T ss_dssp EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEE----TTEEEEEEESCCGGGCEE
T ss_pred eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEcc----CCEEEEEECCCChhHCEE
Confidence 66788999999999988 78899999832 1 11 10 1123322111 124689999999999999
Q ss_pred EEEEEEcCCC--ceEEEEEEEcc
Q psy16426 131 YKCVSKNSLG--DTDGSIKLYGK 151 (194)
Q Consensus 131 y~C~a~n~~g--~~~~~~~l~v~ 151 (194)
|+|.+.|..+ .....+.|.|.
T Consensus 83 Y~C~~~~~~~~~~~~~~~~l~V~ 105 (211)
T 3tv3_L 83 YYCGSLVGNWDVIFGGGTKLTVL 105 (211)
T ss_dssp EEEEEEETTTEEEECCCEEEEEC
T ss_pred EEEEEecCCCceeECCCceEEEe
Confidence 9999999877 23344566665
No 393
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=98.77 E-value=3.6e-09 Score=83.07 Aligned_cols=95 Identities=20% Similarity=0.171 Sum_probs=71.7
Q ss_pred eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCe-EEE
Q psy16426 54 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFG-AYK 132 (194)
Q Consensus 54 ~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g-~y~ 132 (194)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++.......... .....++|.|.+++..|.| .|+
T Consensus 157 ~~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~~-------~~~~~~~L~i~~v~~~D~G~~Y~ 229 (347)
T 2ifg_A 157 GVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKS-------GGLPSLGLTLANVTSDLNRKNVT 229 (347)
T ss_dssp CCCEEEEECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECCC-------CCSSEEEEEEESCCSTTTTCCEE
T ss_pred CCCceeccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeecccccc-------eecccceEEEeeCChHHCCCeEE
Confidence 36777777777778999999999999999999999999554322111100 1122569999999999999 999
Q ss_pred EEEEcCCCceEEEEEEEcccCCC
Q psy16426 133 CVSKNSLGDTDGSIKLYGKKKKK 155 (194)
Q Consensus 133 C~a~n~~g~~~~~~~l~v~~~p~ 155 (194)
|.+.|..|.....+.|.|...|.
T Consensus 230 C~a~n~~g~~~~~~~l~V~~~P~ 252 (347)
T 2ifg_A 230 CWAENDVGRAEVSVQVNVSFPAS 252 (347)
T ss_dssp ECCEETTEECCEEECCCCBEEEE
T ss_pred EEEEcCCCCEEEEEEEEEcCCCe
Confidence 99999998887777777655443
No 394
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=98.77 E-value=2.8e-08 Score=72.51 Aligned_cols=95 Identities=26% Similarity=0.350 Sum_probs=62.1
Q ss_pred ccceeEEeeCCeEEEEEEeeccCC-----CccEEEecCcEEee--C------------CCceeEEecCCceeEEEEEEEe
Q psy16426 61 QNQLVGAMEGDQMTLECHSEAYPK-----SINYWTKENGEIIA--Q------------GSKYEPILLDNAYKIHMKLTIK 121 (194)
Q Consensus 61 ~~~~~~~~~g~~~~l~C~~~~~p~-----p~v~W~~~~~~~~~--~------------~~~~~~~~~~~~~~~~~~L~i~ 121 (194)
....+.+..|+++.|.|.+.+.|. +.+.|++++..+.. . ..+.. ...+.......+|.|.
T Consensus 7 p~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~-~~~~~~~~~~~~L~I~ 85 (222)
T 3sbw_C 7 PKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRAR-LLKDQLSLGNAALQIT 85 (222)
T ss_dssp SCSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEE-ECHHHHTTTEEEEEES
T ss_pred CCccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceE-EccccccCCEEEEEEc
Confidence 345567889999999999877663 37889984311111 0 01111 1100001124689999
Q ss_pred ecCCCCCeEEEEEEEcCCCceEEEEEEEcccCCCCC
Q psy16426 122 AVTKQDFGAYKCVSKNSLGDTDGSIKLYGKKKKKKK 157 (194)
Q Consensus 122 ~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~p~~p 157 (194)
+++.+|.|.|+|.+.| .+.....+.|.|..++..+
T Consensus 86 ~v~~~D~G~Y~C~~~~-~~~~~~~~~l~V~~~~~~~ 120 (222)
T 3sbw_C 86 DVKLQDAGVYRCMISY-GGADYKRITVKVNAPYNKI 120 (222)
T ss_dssp SCCGGGCEEEEEEEES-SSEEEEEEEEEEEBCCCCC
T ss_pred CcccccCeEEEEEEEe-CCCceeEEEEEEECCCCCC
Confidence 9999999999999999 6666677888887665544
No 395
>2d9c_A Signal-regulatory protein beta-1; beta-sandwich, SIRP-beta-1, CD172B antigen, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.76 E-value=3.8e-08 Score=67.00 Aligned_cols=100 Identities=20% Similarity=0.371 Sum_probs=63.3
Q ss_pred EEeccceeEEeeCCeEEEEEEeecc-CCCccEEEecCcE---Eee-CC----CceeEEecC--CceeEEEEEEEeecCCC
Q psy16426 58 IWIQNQLVGAMEGDQMTLECHSEAY-PKSINYWTKENGE---IIA-QG----SKYEPILLD--NAYKIHMKLTIKAVTKQ 126 (194)
Q Consensus 58 i~~~~~~~~~~~g~~~~l~C~~~~~-p~p~v~W~~~~~~---~~~-~~----~~~~~~~~~--~~~~~~~~L~i~~~~~~ 126 (194)
+...+..+.+.+|+++.|.|.+.+. +.+.++|++.++. ++. .. .++.. ..+ .......+|.|.+++.+
T Consensus 11 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~i~~~~~~~~~r~~~-~~~~~~~~~~~~~L~I~~v~~~ 89 (136)
T 2d9c_A 11 VIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTT-VSELTKRNNLDFSISISNITPA 89 (136)
T ss_dssp EECCCSEEEEETTSCEEECCEESCCCSCCCCEEEETTTSSCEEEEESSSCCCSSBCC-SSCSSSSSCCBCCEEESSCCTT
T ss_pred EEecCcEEEEcCCCCEEEEEEEcCCCCCceEEEEeecCCCeEEEEEcCCCcccceee-eeeeccCCCCEEEEEECCCCHH
Confidence 4445567788999999999998765 4568999985421 111 10 11110 000 00011458999999999
Q ss_pred CCeEEEEEEEcCCC--ceE----EEEEEEcccCCCCCh
Q psy16426 127 DFGAYKCVSKNSLG--DTD----GSIKLYGKKKKKKKK 158 (194)
Q Consensus 127 d~g~y~C~a~n~~g--~~~----~~~~l~v~~~p~~p~ 158 (194)
|.|.|+|.+.+..+ ... ..+.|.|...|..|.
T Consensus 90 DsG~Y~C~~~~~~~~~~~~~~~g~~t~L~V~~~~s~P~ 127 (136)
T 2d9c_A 90 DAGTYYCVKFRKGSPDDVEFKSGAGTELSVRAKPSAPV 127 (136)
T ss_dssp TCEEEEEEEEECCSSSCEEEEECCCEEEEEECCCCCCC
T ss_pred HCEEEEEEEEeCCCCcccceeeCCCeEEEEEeCCCCCc
Confidence 99999999987543 111 346777777666554
No 396
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=98.75 E-value=1.3e-08 Score=66.39 Aligned_cols=88 Identities=18% Similarity=0.250 Sum_probs=57.6
Q ss_pred CCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEE
Q psy16426 55 PPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCV 134 (194)
Q Consensus 55 ~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~ 134 (194)
+|.|...+.. .+.+|+.++|.|.+.+. ...+.|++ ++...... ++ ... .....|.|.+++.+|.|.|+|.
T Consensus 5 kP~i~~~p~~-~v~~G~~VtL~C~~~~~-~~~~~w~k-~g~~~~~~-~~---~~~---~~~~~l~I~~v~~~dsG~Y~C~ 74 (105)
T 2vsd_A 5 QPSLSLHPSQ-GVSLGDTVTLRCHLPRM-AAWVQLWL-NGTLRFDK-EK---DKE---QDAAEFSFAVTNLEDAGTYQCR 74 (105)
T ss_dssp CCEEEEESCS-SCCTTCEEEEEEECCSS-CEEEEEEE-TTEEEEEE-EE---CTT---CSEEEEEEECCSGGGCEEEEEE
T ss_pred CCEEEeCCCC-CcCcCCCEEEEEEcCCC-CcEEEEEE-CCccceee-ec---cCC---CCEEEEEECCCCHHHCeEEEEE
Confidence 5677766554 57899999999998765 35677998 44433211 10 111 1246899999999999999999
Q ss_pred EEcCCC----ceEEEEEEEccc
Q psy16426 135 SKNSLG----DTDGSIKLYGKK 152 (194)
Q Consensus 135 a~n~~g----~~~~~~~l~v~~ 152 (194)
+.|... ..+..+.|.|..
T Consensus 75 ~~n~~~~~~s~~Sdpl~L~V~~ 96 (105)
T 2vsd_A 75 YQVSEPLWTSNQSDPVELVLTI 96 (105)
T ss_dssp EEEETTEEECCCCCCEEECCC-
T ss_pred EEcCCCCcccCCCCCEEEEEEE
Confidence 998542 122346665543
No 397
>3u6r_L Antibody 1:7 (light chain); IG-like domain, neutralizing single chain FV, immune system; 2.67A {Homo sapiens}
Probab=98.75 E-value=5.8e-08 Score=66.93 Aligned_cols=92 Identities=17% Similarity=0.292 Sum_probs=59.0
Q ss_pred EEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCc----E-EeeC--------CCceeEEecCCceeEEEEEEEeecC
Q psy16426 58 IWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENG----E-IIAQ--------GSKYEPILLDNAYKIHMKLTIKAVT 124 (194)
Q Consensus 58 i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~----~-~~~~--------~~~~~~~~~~~~~~~~~~L~i~~~~ 124 (194)
+...+..+.+.+|+++.|.|.+.+.+...++|++... . +... ..++..... ....+|+|.+++
T Consensus 3 v~Q~p~~v~v~~G~~vtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~----~~~~sL~I~~l~ 78 (143)
T 3u6r_L 3 LTQSPATLSLSPGERATLSCRASQSVNKYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGS----GTDFTLTISNLE 78 (143)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE----TTEEEEEECSCC
T ss_pred EEECCCEEEEeCCCCEEEEEEECCCCceeeEEEEECCCCCCEEEEEeCCccCCCccCcEeEEcc----CCEEEEEEccCc
Confidence 4455667778999999999998876667789997431 1 1111 123322211 124689999999
Q ss_pred CCCCeEEEEEEEcCCCceEEEEEEEcccC
Q psy16426 125 KQDFGAYKCVSKNSLGDTDGSIKLYGKKK 153 (194)
Q Consensus 125 ~~d~g~y~C~a~n~~g~~~~~~~l~v~~~ 153 (194)
.+|+|.|+|.+.+..........|.|...
T Consensus 79 ~~DsG~Y~C~~~~~~~~fg~gt~L~V~~~ 107 (143)
T 3u6r_L 79 PEDFAVYYCQQRSDWVTFGGGTKVEIKAA 107 (143)
T ss_dssp GGGCEEEEEEECSSBCEECCCEEEEEC--
T ss_pred ccCCEEEEEEEecCCCEECCCEEEEECCC
Confidence 99999999999875422222345666543
No 398
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=98.74 E-value=3.1e-08 Score=70.93 Aligned_cols=70 Identities=23% Similarity=0.353 Sum_probs=53.2
Q ss_pred EeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEee-cCCCCCeEEEEEEEcCCCceEEE
Q psy16426 67 AMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKA-VTKQDFGAYKCVSKNSLGDTDGS 145 (194)
Q Consensus 67 ~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~-~~~~d~g~y~C~a~n~~g~~~~~ 145 (194)
...|+.+.|.|.+.+ + +.+.|++ ++..+... . ..+|.|.+ +..+|.|.|+|.|.|..|.....
T Consensus 11 ~~~G~~v~L~C~~~~-~-~~i~W~k-~g~~l~~~--------~-----~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~ 74 (186)
T 1jbj_A 11 SISGTSVELTCPLDS-D-ENLKWEK-NGQELPQK--------H-----DKHLVLQDFSEVEDSGYYVCYTPASNKNTYLY 74 (186)
T ss_dssp EEETTEEEEECSSCC-C-TTCEEEE-TTEEECSC--------C-----CSEEEEESCCTTTSCEEEEEECSSCCCCCCEE
T ss_pred EeCCcEEEEEEeCCC-C-CceEEEE-CCEECCCC--------C-----CCEEEECCCCccccCEEEEEEEEeCCCcEEEE
Confidence 467999999999887 4 4599999 55544332 1 12799999 99999999999999999886666
Q ss_pred EEEEccc
Q psy16426 146 IKLYGKK 152 (194)
Q Consensus 146 ~~l~v~~ 152 (194)
+.+.+..
T Consensus 75 ~~~~v~~ 81 (186)
T 1jbj_A 75 LKARVGS 81 (186)
T ss_dssp ECCCCCS
T ss_pred EEEEEec
Confidence 6555443
No 399
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=98.73 E-value=2.2e-08 Score=70.91 Aligned_cols=92 Identities=20% Similarity=0.205 Sum_probs=60.3
Q ss_pred eeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCC-CceeEE-ecCCcee---EEEEEEEeecCCCCCeEEEEEEEcC
Q psy16426 64 LVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQG-SKYEPI-LLDNAYK---IHMKLTIKAVTKQDFGAYKCVSKNS 138 (194)
Q Consensus 64 ~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~-~~~~~~-~~~~~~~---~~~~L~i~~~~~~d~g~y~C~a~n~ 138 (194)
.+.+..|+++.|.|.+. .|.+.+.|++++..+.... ...... ...+.+. ...+|.|.+++.+|.|.|.|.+.|.
T Consensus 4 ~v~~~~G~~VtL~c~~~-~~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n~ 82 (171)
T 1ccz_A 4 QIYGVVYGNVTFHVPSN-VPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPNI 82 (171)
T ss_dssp EEEEETTCCEEECCCCS-SCCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEEEECTTC
T ss_pred EEEEEcCCCEEEcCCCC-CCcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCceEEEEEeCC
Confidence 45678899999999884 4788999998544332111 000000 0000000 1248999999999999999999998
Q ss_pred CCceEEEEEEEcccCCCCCh
Q psy16426 139 LGDTDGSIKLYGKKKKKKKK 158 (194)
Q Consensus 139 ~g~~~~~~~l~v~~~p~~p~ 158 (194)
.| ...+.|.|..++..|.
T Consensus 83 ~~--~~~~~L~V~~~~~~p~ 100 (171)
T 1ccz_A 83 TD--TMKFFLYVLEMVSKPM 100 (171)
T ss_dssp CS--CEEEEEEEECCCCCCE
T ss_pred CC--cEEEEEEEECcCCCCE
Confidence 87 5667777766655544
No 400
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=98.73 E-value=6.4e-08 Score=72.05 Aligned_cols=92 Identities=20% Similarity=0.253 Sum_probs=60.7
Q ss_pred EEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCc----EEee---------CCCceeEEecCCceeEEEEEEEeecC
Q psy16426 58 IWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENG----EIIA---------QGSKYEPILLDNAYKIHMKLTIKAVT 124 (194)
Q Consensus 58 i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~----~~~~---------~~~~~~~~~~~~~~~~~~~L~i~~~~ 124 (194)
+...+..+.+.+|+++.|.|.+.+.+.+.+.|++++. .... ...++...... ...+|.|.+++
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~----~~~~L~I~~v~ 79 (242)
T 2znx_A 4 LTQSPATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSG----TDFTLSINSVE 79 (242)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEET----TEEEEEESSCC
T ss_pred EEEcCCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCC----CEEEEEECCCC
Confidence 4455667788999999999999998888999998431 1111 01233211111 14589999999
Q ss_pred CCCCeEEEEEEEcCCCceE-EEEEEEcccC
Q psy16426 125 KQDFGAYKCVSKNSLGDTD-GSIKLYGKKK 153 (194)
Q Consensus 125 ~~d~g~y~C~a~n~~g~~~-~~~~l~v~~~ 153 (194)
.+|.|.|+|.+.|..+... ....|.|...
T Consensus 80 ~~D~G~Y~C~~~n~~~~~~~~~~~L~V~~~ 109 (242)
T 2znx_A 80 TEDFGMYFCQQSNSXPYTFGGGTKLEITGG 109 (242)
T ss_dssp GGGCEEEEEEECSSSSCEECCCEEEEEC--
T ss_pred hHHCEEEEEeEecCCceEECCCEEEEEcCC
Confidence 9999999999998754321 2345555443
No 401
>2yc1_B Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_B 3lh2_L 3h3p_L 3lhp_L
Probab=98.72 E-value=2.2e-07 Score=64.29 Aligned_cols=96 Identities=17% Similarity=0.271 Sum_probs=61.0
Q ss_pred CCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCc----EE-eeC--------CCceeEEecCCceeEEEEEEEe
Q psy16426 55 PPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENG----EI-IAQ--------GSKYEPILLDNAYKIHMKLTIK 121 (194)
Q Consensus 55 ~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~----~~-~~~--------~~~~~~~~~~~~~~~~~~L~i~ 121 (194)
.+.+...+..+.+.+|+++.|.|.+.+.+.+.++||+... .. ... ..++...... ...+|+|.
T Consensus 16 ~~~v~q~p~~v~v~~G~sVtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~----~~~sL~I~ 91 (146)
T 2yc1_B 16 EIVLTQSPATLSVSPGERATLSCRASQSVRSYLAWYQQKPGQAPRLLFSDASNRATGIPARFTGSGSG----TDFTLTIS 91 (146)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET----TEEEEEES
T ss_pred cceEEEeCCEEEEecCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEEeCCccCCCcCCCeEEecCC----CEEEEEEC
Confidence 3445556677788999999999999877677899998532 11 111 1233221111 14589999
Q ss_pred ecCCCCCeEEEEEEEcCCCce-EEEEEEEcccCC
Q psy16426 122 AVTKQDFGAYKCVSKNSLGDT-DGSIKLYGKKKK 154 (194)
Q Consensus 122 ~~~~~d~g~y~C~a~n~~g~~-~~~~~l~v~~~p 154 (194)
+++.+|.|.|+|.+.+..... .....|.|...+
T Consensus 92 ~v~~~DsG~Y~C~~~~~~~~~fg~GT~L~V~~~~ 125 (146)
T 2yc1_B 92 SLEPEDFAIYYCQQYRYSPRTFGQGTKVEIKRAA 125 (146)
T ss_dssp SCCGGGCSEEEEEECSSSSCEECCCEEEEEC---
T ss_pred CCCHHHCEEEEEEEecCCCCeECCCEEEEEeCCc
Confidence 999999999999998753221 123456665443
No 402
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.72 E-value=5.8e-08 Score=71.82 Aligned_cols=92 Identities=16% Similarity=0.235 Sum_probs=61.1
Q ss_pred EEeccceeEEeeCCeEEEEEEeeccC----CCccEEEecCc----EEeeC---------CCceeEEecCCceeEEEEEEE
Q psy16426 58 IWIQNQLVGAMEGDQMTLECHSEAYP----KSINYWTKENG----EIIAQ---------GSKYEPILLDNAYKIHMKLTI 120 (194)
Q Consensus 58 i~~~~~~~~~~~g~~~~l~C~~~~~p----~p~v~W~~~~~----~~~~~---------~~~~~~~~~~~~~~~~~~L~i 120 (194)
+...+..+.+.+|+++.|.|.+.+.+ .+.+.|++++. ..... ..++..... ....+|.|
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~----~~~~~L~I 79 (240)
T 1moe_A 4 LTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGS----RTDFTLII 79 (240)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE----TTEEEEEE
T ss_pred eEeeCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEec----CCeEEEEE
Confidence 44556677789999999999999887 78899998431 11110 122221111 11358999
Q ss_pred eecCCCCCeEEEEEEEcCCCc-eEEEEEEEcccC
Q psy16426 121 KAVTKQDFGAYKCVSKNSLGD-TDGSIKLYGKKK 153 (194)
Q Consensus 121 ~~~~~~d~g~y~C~a~n~~g~-~~~~~~l~v~~~ 153 (194)
.+++.+|.|.|+|.+.|..+. ......|.|...
T Consensus 80 ~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~ 113 (240)
T 1moe_A 80 DPVEADDVATYYCQQTNEDPYTFGGGTKLEIKGG 113 (240)
T ss_dssp SSCCGGGCEEEEEEECSSSSCCBCCCEEEEECCC
T ss_pred cCCChhhCEEEEEEEccCCceeecCCEEEEEecC
Confidence 999999999999999998654 223344555443
No 403
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=98.72 E-value=1.1e-07 Score=72.30 Aligned_cols=94 Identities=17% Similarity=0.260 Sum_probs=61.5
Q ss_pred CeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCc----EEe-eC--------CCceeEEecCCceeEEEEEEEee
Q psy16426 56 PMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENG----EII-AQ--------GSKYEPILLDNAYKIHMKLTIKA 122 (194)
Q Consensus 56 p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~----~~~-~~--------~~~~~~~~~~~~~~~~~~L~i~~ 122 (194)
+.+...+..+.+.+|+++.|.|.+.+.+.+.+.|++++. ... .. ..++.... + ....+|.|.+
T Consensus 13 ~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~---~~~~~L~I~~ 88 (276)
T 3auv_A 13 IQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSG-S---GTDFTLTISS 88 (276)
T ss_dssp CCEEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-E---TTEEEEEESS
T ss_pred eeEEeCCCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEec-c---CCeEEEEEcc
Confidence 345556667778899999999999998888999998442 111 10 12332111 1 1135899999
Q ss_pred cCCCCCeEEEEEEEcCCCc-eEEEEEEEcccC
Q psy16426 123 VTKQDFGAYKCVSKNSLGD-TDGSIKLYGKKK 153 (194)
Q Consensus 123 ~~~~d~g~y~C~a~n~~g~-~~~~~~l~v~~~ 153 (194)
++.+|.|.|+|.+.|..+. ......|.|...
T Consensus 89 v~~~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~ 120 (276)
T 3auv_A 89 LQPEDFATYYCQQHYTTPPTFGCGTKVEIKGG 120 (276)
T ss_dssp CCGGGCEEEEEEECSSSSCCCCCCEEEEC---
T ss_pred CChhhCEEEEEEEecCCcccccCCEEEEEecC
Confidence 9999999999999997543 222345555443
No 404
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=98.72 E-value=4.7e-08 Score=68.41 Aligned_cols=78 Identities=17% Similarity=0.340 Sum_probs=56.8
Q ss_pred CCeEEeccceeEEeeCCeEEEEEEeeccC-CCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEE
Q psy16426 55 PPMIWIQNQLVGAMEGDQMTLECHSEAYP-KSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKC 133 (194)
Q Consensus 55 ~p~i~~~~~~~~~~~g~~~~l~C~~~~~p-~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C 133 (194)
+|.+...+....+.+|+.+.|.|.+.+.| .+.+.|++ ++..+.... ..+.|.+++.+|.|.|+|
T Consensus 4 ~p~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~-~g~~~~~~~--------------~~~~~~~~~~~d~G~Y~C 68 (170)
T 3ry4_A 4 KAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFH-NGNLIPTHT--------------QPSYRFKANNNDSGEYTC 68 (170)
T ss_dssp BCEEEEESCCSEEETTCEEEEEEESCCCSSSSCEEEEE-TTEECTTCC--------------SSEEEEECCGGGCEEEEE
T ss_pred CCEEEeCCCCeEEECCCcEEEEEEecCCCCcceEEEEE-CCeEcccCc--------------cceEEEecccccCeEEEE
Confidence 35566666666788999999999999886 57899999 555443221 145567889999999999
Q ss_pred EEEcCCCceEEEEE
Q psy16426 134 VSKNSLGDTDGSIK 147 (194)
Q Consensus 134 ~a~n~~g~~~~~~~ 147 (194)
.+.|...+....+.
T Consensus 69 ~~~~~~~s~~~~l~ 82 (170)
T 3ry4_A 69 QTGQTSLSDPVHLT 82 (170)
T ss_dssp EETTSBCCCCEEEE
T ss_pred EEeCCCceEeEEEE
Confidence 99986655543333
No 405
>1neu_A Myelin P0 protein; structural protein, glycoprotein, transmembrane, phosphorylation, immunoglobulin fold, signal; 1.90A {Rattus norvegicus} SCOP: b.1.1.1
Probab=98.72 E-value=5.4e-08 Score=64.74 Aligned_cols=93 Identities=18% Similarity=0.224 Sum_probs=56.1
Q ss_pred ccceeEEeeCCeEEEEEEeecc----CCCccEEEecCcE------EeeC-------------CCceeEEecCCceeEEEE
Q psy16426 61 QNQLVGAMEGDQMTLECHSEAY----PKSINYWTKENGE------IIAQ-------------GSKYEPILLDNAYKIHMK 117 (194)
Q Consensus 61 ~~~~~~~~~g~~~~l~C~~~~~----p~p~v~W~~~~~~------~~~~-------------~~~~~~~~~~~~~~~~~~ 117 (194)
.+..+.+..|+++.|.|..... +.+.+.|++.+.. +... ..++. .........++
T Consensus 5 ~~~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~R~~--~~~~~~~~~~s 82 (124)
T 1neu_A 5 TDREVYGAVGSQVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQ--WVGDPSWKDGS 82 (124)
T ss_dssp CCSEEEEETTSCEEECCEEECSSCCCSCCEEEEEEEETTCCCCEEEEEEETTEEEECSSSTTTTCEE--ECCBGGGTBCC
T ss_pred cCCeEEEEeCCeEEEEeEEeCCCCCCCceEEEEEEcCCCCCceEEEEEecCCeeccccCccccCcEE--EecCCcCCeEE
Confidence 3456678899999999997543 3567889874321 1100 01111 11000011358
Q ss_pred EEEeecCCCCCeEEEEEEEcCCCc--eEEEEEEEcccCCC
Q psy16426 118 LTIKAVTKQDFGAYKCVSKNSLGD--TDGSIKLYGKKKKK 155 (194)
Q Consensus 118 L~i~~~~~~d~g~y~C~a~n~~g~--~~~~~~l~v~~~p~ 155 (194)
|.|.+++.+|.|.|+|.+.+..+. ....+.|.|...|+
T Consensus 83 L~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~v~L~V~~~p~ 122 (124)
T 1neu_A 83 IVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFEKVP 122 (124)
T ss_dssp EEECSCCGGGCEEEEEEEEC----CCEEEEEEEEEEC---
T ss_pred EEEccCChhhCEEEEEEEEcCCCCcCcEeeEEEEEecCCC
Confidence 999999999999999999987764 45678888876543
No 406
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=98.72 E-value=1e-07 Score=71.30 Aligned_cols=94 Identities=17% Similarity=0.229 Sum_probs=61.6
Q ss_pred CCeEEeccceeEEeeCCeEEEEEEeeccC-----CCccEEEecCc-E---Eee---------CCCceeEEecCCceeEEE
Q psy16426 55 PPMIWIQNQLVGAMEGDQMTLECHSEAYP-----KSINYWTKENG-E---IIA---------QGSKYEPILLDNAYKIHM 116 (194)
Q Consensus 55 ~p~i~~~~~~~~~~~g~~~~l~C~~~~~p-----~p~v~W~~~~~-~---~~~---------~~~~~~~~~~~~~~~~~~ 116 (194)
.+.+...+..+.+.+|+++.|.|.+.+.+ .+.+.|++++. . ... ...++..... ....
T Consensus 34 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~----~~~~ 109 (252)
T 3bkj_L 34 DVLMTQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGS----GTDF 109 (252)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE----TTEE
T ss_pred ccEEEeCCceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEcc----CCEE
Confidence 44455556777789999999999998877 58899998441 1 110 0122221111 1135
Q ss_pred EEEEeecCCCCCeEEEEEEEcCCCceE-EEEEEEccc
Q psy16426 117 KLTIKAVTKQDFGAYKCVSKNSLGDTD-GSIKLYGKK 152 (194)
Q Consensus 117 ~L~i~~~~~~d~g~y~C~a~n~~g~~~-~~~~l~v~~ 152 (194)
+|.|.+++.+|.|.|+|.+.|..+... ....|.|..
T Consensus 110 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~ 146 (252)
T 3bkj_L 110 TLRISRVEAEDLGVYYCFQASLVPLTFGAGTKLELKR 146 (252)
T ss_dssp EEEESSCCGGGCEEEEEEECSBSSCEECCCEEEEECC
T ss_pred EEEECCCCcccCEEEEEEEEcCCccEECCCEEEEEeC
Confidence 899999999999999999998765322 223455543
No 407
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=98.71 E-value=1.2e-07 Score=70.39 Aligned_cols=80 Identities=19% Similarity=0.312 Sum_probs=55.1
Q ss_pred EEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCc----EE-----------eeCC---CceeEEecCCceeEEEEEE
Q psy16426 58 IWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENG----EI-----------IAQG---SKYEPILLDNAYKIHMKLT 119 (194)
Q Consensus 58 i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~----~~-----------~~~~---~~~~~~~~~~~~~~~~~L~ 119 (194)
+...+..+.+.+|+++.|.|.+.+.+.+.+.|++... .. .... .++...... ....+|.
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~~L~ 80 (246)
T 4dzb_B 4 VSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHAS---LTLSTLT 80 (246)
T ss_dssp EEEECSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEE---TTEEEEE
T ss_pred cEECCcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecC---CCEEEEE
Confidence 4455667788999999999999998889999997211 00 0000 222211111 1245899
Q ss_pred EeecCCCCCeEEEEEEEcCCC
Q psy16426 120 IKAVTKQDFGAYKCVSKNSLG 140 (194)
Q Consensus 120 i~~~~~~d~g~y~C~a~n~~g 140 (194)
|.+++.+|.|.|+|.+.|..+
T Consensus 81 I~~v~~~D~G~Y~C~~~~~~~ 101 (246)
T 4dzb_B 81 VTSAHPEDSSFYICSARTSGD 101 (246)
T ss_dssp ECSCCGGGCEEEEEEECCSSG
T ss_pred ECCCCHHHCEEEEEEEecCCC
Confidence 999999999999999987643
No 408
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=98.71 E-value=8.6e-08 Score=69.14 Aligned_cols=90 Identities=16% Similarity=0.185 Sum_probs=61.6
Q ss_pred cceeEEeeCCeEEEEEEeeccCCCccEEEecCcE-----EeeC-------------CCceeEEecCCceeEEEEEEEeec
Q psy16426 62 NQLVGAMEGDQMTLECHSEAYPKSINYWTKENGE-----IIAQ-------------GSKYEPILLDNAYKIHMKLTIKAV 123 (194)
Q Consensus 62 ~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~-----~~~~-------------~~~~~~~~~~~~~~~~~~L~i~~~ 123 (194)
+....+.+|+.+.|.|...+.+.+.+.|++++.. +... ..+. .... .++|.|.++
T Consensus 6 ~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~--~~~~-----~~~L~i~~v 78 (208)
T 3r4d_A 6 AVPPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGRE--IIYS-----NGSLLFQMI 78 (208)
T ss_dssp EESSEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSE--EECT-----TSCEEECSC
T ss_pred CccceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCcccccee--EEec-----CCeEEEccc
Confidence 3345678999999999988888889999984321 1000 0011 0111 137999999
Q ss_pred CCCCCeEEEEEEEcCC-CceEEEEEEEcccCCCCCh
Q psy16426 124 TKQDFGAYKCVSKNSL-GDTDGSIKLYGKKKKKKKK 158 (194)
Q Consensus 124 ~~~d~g~y~C~a~n~~-g~~~~~~~l~v~~~p~~p~ 158 (194)
+.+|.|.|+|.+.|.. +.....+.|.|...+..|.
T Consensus 79 ~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~ 114 (208)
T 3r4d_A 79 TMKDMGVYTLDMTDENYRRTQATVRFHVHQPVTQPF 114 (208)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEEEEEECCCCCCE
T ss_pred cccCCeEEEEEEEcccCceeEEEEEEEeccCCCCCE
Confidence 9999999999999985 4555677787776655443
No 409
>1i3g_L Antibody FV fragment; antibiotic; 2.44A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy6_A
Probab=98.71 E-value=6.4e-08 Score=63.55 Aligned_cols=78 Identities=17% Similarity=0.337 Sum_probs=54.4
Q ss_pred eEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCc----E-EeeC--------CCceeEEecCCceeEEEEEEEeec
Q psy16426 57 MIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENG----E-IIAQ--------GSKYEPILLDNAYKIHMKLTIKAV 123 (194)
Q Consensus 57 ~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~----~-~~~~--------~~~~~~~~~~~~~~~~~~L~i~~~ 123 (194)
.+...+..+.+.+|+++.|.|.+.+.+.+.++|++... . +... ..++..... ....+|.|.++
T Consensus 6 ~v~q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~----~~~~~L~I~~v 81 (111)
T 1i3g_L 6 VLTQSHKFMSTSVGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGS----GTDFTLTISNV 81 (111)
T ss_dssp CEEESCSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE----TTEEEEEESSC
T ss_pred eEEEeCCEEEEcCCCCEEEEEEeCCCCCCCEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEcC----CCEEEEEECCC
Confidence 34555667778899999999999877777899997532 1 1111 122322111 11458999999
Q ss_pred CCCCCeEEEEEEEcC
Q psy16426 124 TKQDFGAYKCVSKNS 138 (194)
Q Consensus 124 ~~~d~g~y~C~a~n~ 138 (194)
+.+|.|.|.|.+.+.
T Consensus 82 ~~~DsG~Y~C~~~~~ 96 (111)
T 1i3g_L 82 QSEDLADYFCQQYSS 96 (111)
T ss_dssp CGGGCSEEEEEECSS
T ss_pred CHHHCEEEEEEEecC
Confidence 999999999999875
No 410
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=98.71 E-value=1.2e-07 Score=68.68 Aligned_cols=85 Identities=21% Similarity=0.296 Sum_probs=57.0
Q ss_pred cceeEEeeCCeEEEEEEeeccC---CCccEEEecC-c-EE---e--------eCCCceeEEecCCceeEEEEEEEeecCC
Q psy16426 62 NQLVGAMEGDQMTLECHSEAYP---KSINYWTKEN-G-EI---I--------AQGSKYEPILLDNAYKIHMKLTIKAVTK 125 (194)
Q Consensus 62 ~~~~~~~~g~~~~l~C~~~~~p---~p~v~W~~~~-~-~~---~--------~~~~~~~~~~~~~~~~~~~~L~i~~~~~ 125 (194)
+..+.+.+|+++.|.|.+.+.+ .+.+.|++++ + .. . ....++..... ...++|.|.+++.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~----~~~~~L~I~~v~~ 82 (212)
T 1q0x_L 7 ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLI----GDKAALTITGAQT 82 (212)
T ss_dssp CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEE----TTEEEEEESSCCG
T ss_pred CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEee----CCEEEEEECCCCc
Confidence 5677789999999999998877 4789999843 1 11 0 01123321111 1145899999999
Q ss_pred CCCeEEEEEEEcCCCceE-EEEEEEc
Q psy16426 126 QDFGAYKCVSKNSLGDTD-GSIKLYG 150 (194)
Q Consensus 126 ~d~g~y~C~a~n~~g~~~-~~~~l~v 150 (194)
+|.|.|+|.+.|..+... ....|.|
T Consensus 83 ~D~G~Y~C~~~~~~~~~~~~~~~l~V 108 (212)
T 1q0x_L 83 EDEAIYFCALWSNNKLVFGGGTKLTV 108 (212)
T ss_dssp GGCEEEEEEEECSSCEEECCCEEEEE
T ss_pred cCCEEEEEEEecCchhhcCCCeEEEE
Confidence 999999999999765322 2234555
No 411
>1j05_L T84.66 antibody, anti-CEA MAB T84.66, light chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1qfw_L* 1qnz_L 3iy3_A 3iy4_A
Probab=98.71 E-value=5.2e-08 Score=63.90 Aligned_cols=77 Identities=16% Similarity=0.306 Sum_probs=52.6
Q ss_pred EEeccceeEEeeCCeEEEEEEeeccC----CCccEEEecCc----E-EeeC--------CCceeEEecCCceeEEEEEEE
Q psy16426 58 IWIQNQLVGAMEGDQMTLECHSEAYP----KSINYWTKENG----E-IIAQ--------GSKYEPILLDNAYKIHMKLTI 120 (194)
Q Consensus 58 i~~~~~~~~~~~g~~~~l~C~~~~~p----~p~v~W~~~~~----~-~~~~--------~~~~~~~~~~~~~~~~~~L~i 120 (194)
+...+..+.+.+|+.+.|.|.+.+.+ .+.++|++... . +... ..++..... ....+|.|
T Consensus 4 v~q~p~~~~~~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~----~~~~~L~I 79 (111)
T 1j05_L 4 LTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGS----RTDFTLII 79 (111)
T ss_dssp EEEECSEEECCTTSCEEEEEEESSCCEETTEECEEEEEECTTSCEEEEEETTTEECTTSCTTEEEEEE----TTEEEEEE
T ss_pred EEEeCCEEEEeCCCCEEEEeecCCCcccCCCceEEEEEeCCCCCCEEEEEecCcCCCCCCCcEEEEcc----CCEEEEEE
Confidence 34455667788999999999988765 46789998431 1 1111 123322111 11458999
Q ss_pred eecCCCCCeEEEEEEEcC
Q psy16426 121 KAVTKQDFGAYKCVSKNS 138 (194)
Q Consensus 121 ~~~~~~d~g~y~C~a~n~ 138 (194)
.+++.+|.|.|+|.+.+.
T Consensus 80 ~~v~~~DsG~Y~C~~~~~ 97 (111)
T 1j05_L 80 DPVEADDVATYYCQQTNE 97 (111)
T ss_dssp SSCCGGGCEEEEEEECSS
T ss_pred CCCCcccCEEEEEEEecC
Confidence 999999999999999875
No 412
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=98.70 E-value=1.1e-08 Score=74.43 Aligned_cols=75 Identities=8% Similarity=0.061 Sum_probs=52.6
Q ss_pred EeeCCeEEEEEEeeccC----CCccEEEecCcEEeeCCCc-eeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCc
Q psy16426 67 AMEGDQMTLECHSEAYP----KSINYWTKENGEIIAQGSK-YEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGD 141 (194)
Q Consensus 67 ~~~g~~~~l~C~~~~~p----~p~v~W~~~~~~~~~~~~~-~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~ 141 (194)
+.+|+++.|.|.+.+.+ ...+.|++++ ........ ......++.+...+.|.|.++..+|.|.|+|.+.|..+.
T Consensus 15 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~-~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~~~~ 93 (207)
T 2vol_A 15 LTITLTPKVTCVVVDISKDDPEVQFSWFVDD-VEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFP 93 (207)
T ss_dssp HSTTSCCEEEEEEEEECTTCCCCEEEEEETT-EEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEEEEEECTTCS
T ss_pred hccCCceEEEEEEeCcccCCCceEEEEEECC-ccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEEEEEEccCCC
Confidence 67899999999998874 2378999955 33322110 000122333445678999999999999999999998875
Q ss_pred e
Q psy16426 142 T 142 (194)
Q Consensus 142 ~ 142 (194)
.
T Consensus 94 ~ 94 (207)
T 2vol_A 94 A 94 (207)
T ss_dssp S
T ss_pred C
Confidence 4
No 413
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=98.70 E-value=9.7e-08 Score=71.04 Aligned_cols=91 Identities=20% Similarity=0.307 Sum_probs=59.7
Q ss_pred EEeccceeEEeeCCeEEEEEEeeccC-----CCccEEEecCc-E---Eee-C--------CCceeEEecCCceeEEEEEE
Q psy16426 58 IWIQNQLVGAMEGDQMTLECHSEAYP-----KSINYWTKENG-E---IIA-Q--------GSKYEPILLDNAYKIHMKLT 119 (194)
Q Consensus 58 i~~~~~~~~~~~g~~~~l~C~~~~~p-----~p~v~W~~~~~-~---~~~-~--------~~~~~~~~~~~~~~~~~~L~ 119 (194)
+...+..+.+.+|+++.|.|.+.+.+ .+.+.|++.+. . ... . ..++..... ....+|.
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~----~~~~~L~ 79 (247)
T 1svz_A 4 MTQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGS----GTDFTLK 79 (247)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEE----TTEEEEE
T ss_pred EEecCCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccC----CCEEEEE
Confidence 44456677889999999999998877 58899997431 1 111 0 123322111 1145899
Q ss_pred EeecCCCCCeEEEEEEEcCCCce-EEEEEEEccc
Q psy16426 120 IKAVTKQDFGAYKCVSKNSLGDT-DGSIKLYGKK 152 (194)
Q Consensus 120 i~~~~~~d~g~y~C~a~n~~g~~-~~~~~l~v~~ 152 (194)
|.+++.+|.|.|+|.+.|..+.. .....|.|..
T Consensus 80 I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~ 113 (247)
T 1svz_A 80 ISRVEAEDLGIYYCFQGSHFPPTFGGGTKLEIKG 113 (247)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC-
T ss_pred ECCCCHHHCEEEEEEEccCCccEECCCEEEEEEC
Confidence 99999999999999999875532 1224455544
No 414
>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}
Probab=98.70 E-value=5.8e-08 Score=65.64 Aligned_cols=92 Identities=21% Similarity=0.230 Sum_probs=57.5
Q ss_pred eccceeEEeeCCeEEEEEEeec---cCCCccEEEecCcEE----eeC-------------CC-ceeEEecC--Ccee---
Q psy16426 60 IQNQLVGAMEGDQMTLECHSEA---YPKSINYWTKENGEI----IAQ-------------GS-KYEPILLD--NAYK--- 113 (194)
Q Consensus 60 ~~~~~~~~~~g~~~~l~C~~~~---~p~p~v~W~~~~~~~----~~~-------------~~-~~~~~~~~--~~~~--- 113 (194)
..+..+.+..|+++.|.|.... .+.+.+.|++.+... +.. .. .......+ +.+.
T Consensus 9 ~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~ 88 (135)
T 1xt5_A 9 TTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVAN 88 (135)
T ss_dssp CSCSEEEEETTSCEEECCEEEEETCCSCCEEEEEEESSSSSEEEEEEEEECCCCTTCCCCTTSEEEEECGGGTTTEEESC
T ss_pred CCCceEEEeCCCCEEEeeEeecCCCCCccEEEEEeeCCCCCceEEEEeccccccccccccccccccccChhhcCcEEEec
Confidence 3455677889999999999753 567789999854321 000 00 00000000 1111
Q ss_pred -EEEEEEEeecCCCCCeEEEEEEEcCC-----CceEEEEEEEcc
Q psy16426 114 -IHMKLTIKAVTKQDFGAYKCVSKNSL-----GDTDGSIKLYGK 151 (194)
Q Consensus 114 -~~~~L~i~~~~~~d~g~y~C~a~n~~-----g~~~~~~~l~v~ 151 (194)
...+|.|.+++.+|.|.|.|.+.|.. |.....+.|.|.
T Consensus 89 ~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~g~~~~~~~L~V~ 132 (135)
T 1xt5_A 89 LAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVT 132 (135)
T ss_dssp TTSCCEEECSCCGGGCEEEEEEEECSSCCSGGGEEEEEEEEEEE
T ss_pred CCCCeEEECCCChhhCcEEEEEEEcCCccccccccceeEEEEEe
Confidence 12589999999999999999999854 334467777664
No 415
>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune system; NMR {Mus musculus}
Probab=98.69 E-value=1.4e-07 Score=78.81 Aligned_cols=119 Identities=14% Similarity=0.204 Sum_probs=74.8
Q ss_pred eeCCCcEEEEeeeeccCC----ceeEEEecCceEE-------------------------------------Ee------
Q psy16426 21 AMEGDQMTLECHSEAYPK----SINYWTKENGEII-------------------------------------AQ------ 53 (194)
Q Consensus 21 v~~G~~v~L~C~~~g~p~----~~v~W~k~~~~l~-------------------------------------v~------ 53 (194)
+..|++.+|.|.+.+... +.|+||+++..+. +.
T Consensus 355 ~~~~~~~~l~C~~~~~~p~~~~i~v~W~~~~~~~~~~~t~~~~~~~n~~~~~~s~L~i~~~~~~~~~~y~C~v~~~~~~~ 434 (551)
T 1ntl_A 355 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPA 434 (551)
T ss_pred eeeccCcceEEEEEecccCCCceEEEEEECCccccccccCCceECCCCeEEEEEeeEcCHHHccCCceEEEEEecCCCCC
Confidence 667899999999988643 5899999875431 11
Q ss_pred -------------eCCeEEeccceeEEeeCCeEEEEEEeeccCCC--ccEEEecCcEEeeCCCceeE-EecCCceeEEEE
Q psy16426 54 -------------VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKS--INYWTKENGEIIAQGSKYEP-ILLDNAYKIHMK 117 (194)
Q Consensus 54 -------------~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p--~v~W~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 117 (194)
.+|.+.+.........++.+.|.|.+.++.++ .+.|++ ++........... ...+..|...+.
T Consensus 435 ~~~~~~~~~~~~~~~P~V~~~~~~~~~~~~~~~~L~C~v~gfyP~~i~v~W~k-~g~~~~~~~~~~~~~~~dgty~~~s~ 513 (551)
T 1ntl_A 435 PIEKTISKTKGRPKAPQLYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQW-NGQPAENYKNTQPIMNTNGSYFVYSK 513 (551)
T ss_pred CeEEEEecCCCCCcCCceEEeCCChhhccCCceEEEEEEEEeECCCCEEEEEE-CCEEccCceeccceeCCCCCEEEEEE
Confidence 11222211111112357889999999996544 577999 5554332111111 234455666777
Q ss_pred EEEeecCCCCCeEEEEEEEcCCC
Q psy16426 118 LTIKAVTKQDFGAYKCVSKNSLG 140 (194)
Q Consensus 118 L~i~~~~~~d~g~y~C~a~n~~g 140 (194)
|.|......+.+.|+|.+.+...
T Consensus 514 l~v~~~~~~~~~~ytC~V~h~~l 536 (551)
T 1ntl_A 514 LNVQKSNWEAGNTFTCSVLHEGL 536 (551)
T ss_pred EEEcHHHcCCCCeEEEEEEECCC
Confidence 88877666667899999987654
No 416
>2coq_A NEW antigen receptor variable domain; IG VNAR, natural TYPE2, immune system; 2.10A {Orectolobus maculatus}
Probab=98.69 E-value=9.3e-08 Score=62.42 Aligned_cols=78 Identities=21% Similarity=0.423 Sum_probs=53.2
Q ss_pred EEeccceeEEeeCCeEEEEEEeeccC--CCccEEEecC-cE----EeeCCCceeEEecCCceeEEEEEEEeecCCCCCeE
Q psy16426 58 IWIQNQLVGAMEGDQMTLECHSEAYP--KSINYWTKEN-GE----IIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGA 130 (194)
Q Consensus 58 i~~~~~~~~~~~g~~~~l~C~~~~~p--~p~v~W~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~ 130 (194)
+...+..+.+.+|+++.|.|.+.+.. .+.++|+++. +. +.....++....... ....+|.|.+++.+|+|.
T Consensus 3 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~r~~~~~~~~--~~~~~L~I~~~~~~DsG~ 80 (108)
T 2coq_A 3 VDQTPRIATKETGESLTINCVLRDTACALDSTNWYRTKLGSTKEQTISIGGRYSETVDEG--SNSASLTIRDLRVEDSGT 80 (108)
T ss_dssp EEEECSEEEECTTCCEEEEEEECCSSEEEEEEEEEEEETTCCCEEECCCBTTEEEEEETT--TTEEEEEECSCCGGGCEE
T ss_pred eEeCCceEEEcCCCCEEEEeEeCCCcCCCCEEEEEEcCCCCCcEEEEEeCCceEEEEcCC--CCEEEEEECCCCcccCEE
Confidence 34456667788999999999987653 5678899842 11 222223443221111 124689999999999999
Q ss_pred EEEEEEc
Q psy16426 131 YKCVSKN 137 (194)
Q Consensus 131 y~C~a~n 137 (194)
|.|.+.|
T Consensus 81 Y~C~~~~ 87 (108)
T 2coq_A 81 YKCKAYR 87 (108)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 9999987
No 417
>2or7_A T-cell immunoglobulin and mucin domain- containing protein 2; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 1.50A {Mus musculus}
Probab=98.69 E-value=1.8e-08 Score=66.51 Aligned_cols=91 Identities=23% Similarity=0.230 Sum_probs=58.4
Q ss_pred cceeEEeeCCeEEEEEEeecc--CCCccEEEecC-------cEEee-C--------CCceeEEecCCceeEEEEEEEeec
Q psy16426 62 NQLVGAMEGDQMTLECHSEAY--PKSINYWTKEN-------GEIIA-Q--------GSKYEPILLDNAYKIHMKLTIKAV 123 (194)
Q Consensus 62 ~~~~~~~~g~~~~l~C~~~~~--p~p~v~W~~~~-------~~~~~-~--------~~~~~~~~~~~~~~~~~~L~i~~~ 123 (194)
+..+.+.+|+++.|.|..... ....+.|++.. ..+.. . ..++. ..+.......+|.|.++
T Consensus 4 p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~i~~~~~~~~~~~~~r~~--~~~~~~~~~~sL~I~~v 81 (115)
T 2or7_A 4 HTAVQGLAGHPVTLPCIYSTHLGGIVPMCWGLGECRHSYCIRSLIWTNGYTVTHQRNSRYQ--LKGNISEGNVSLTIENT 81 (115)
T ss_dssp --CEEEETTSCEEECCBCCHHHHCSCCEEEEESCHHHHTTTTEEEEECSSSEEEESSTTEE--CCSCGGGTBCCEEESSC
T ss_pred ccEEEEEcCCCEEEEEEeecCCCCCEEEEEECCCCCcCCCceEEEEeCCeEcccccCccEE--EecCccCCeEEEEEccC
Confidence 455678899999999987643 24578899853 11211 1 11221 11111112458999999
Q ss_pred CCCCCeEEEEEEEcCCCceEEEEEEEcccCC
Q psy16426 124 TKQDFGAYKCVSKNSLGDTDGSIKLYGKKKK 154 (194)
Q Consensus 124 ~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~p 154 (194)
+.+|+|.|.|.+.+........+.|.|...+
T Consensus 82 ~~~DsG~Y~C~v~~~~~~~~~~v~L~V~~~~ 112 (115)
T 2or7_A 82 VVGDGGPYCCVVEIPGAFHFVDYMLEVKPEL 112 (115)
T ss_dssp CGGGCEEEEEEECCTTSCEEEEEEEEEESCC
T ss_pred CHHHCEEEEEEEECCCceeEEEEEEEEcCCC
Confidence 9999999999998765555677778775543
No 418
>3moq_A NEW antigen receptor variable domain, P3(40) PEPT amyloid beta A4 protein; AB-ignar, AB-12Y-2, glycoprotein, membran protease inhibitor; 2.05A {Orectolobus maculatus} PDB: 2z8w_C 2z8v_C 1ves_A 1ver_A
Probab=98.69 E-value=2.4e-07 Score=62.41 Aligned_cols=81 Identities=17% Similarity=0.271 Sum_probs=55.3
Q ss_pred EEeccceeEEeeCCeEEEEEEeecc--CCCccEEEecCc-----EEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeE
Q psy16426 58 IWIQNQLVGAMEGDQMTLECHSEAY--PKSINYWTKENG-----EIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGA 130 (194)
Q Consensus 58 i~~~~~~~~~~~g~~~~l~C~~~~~--p~p~v~W~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~ 130 (194)
+...+..+.+.+|+++.|.|...+. +.+.++||+... .+.....++....... ....+|+|.+++.+|+|.
T Consensus 3 V~Q~p~~v~v~~G~svtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~li~~~~R~~~~~~~~--~~~~sL~I~~v~~~DsG~ 80 (126)
T 3moq_A 3 VDQTPRTATKETGESLTINCVLRDASFELKDTGWYRTKLGSTNEQSISIGGRYVETVNKG--SKSFSLRISDLRVEDSGT 80 (126)
T ss_dssp EEEECSEEEEETTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCEECCCBTTEEEEEETT--TTEEEEEECSCCGGGCEE
T ss_pred eEECCceEEEeCCCCEEEEEEeecCccCCceEEEEEeCCCCCceEEEEeCCcEEEEEeCC--CCEEEEEECcCChHhCEE
Confidence 4556677888999999999998765 456788997421 1122223343221111 125689999999999999
Q ss_pred EEEEEEcCCC
Q psy16426 131 YKCVSKNSLG 140 (194)
Q Consensus 131 y~C~a~n~~g 140 (194)
|+|.+.+..+
T Consensus 81 Y~C~~~~~~~ 90 (126)
T 3moq_A 81 YKCQAFYVFF 90 (126)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEEEEcCC
Confidence 9999987654
No 419
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=98.69 E-value=1.6e-08 Score=75.39 Aligned_cols=94 Identities=13% Similarity=0.092 Sum_probs=62.7
Q ss_pred ccceeEEeeCCeEEEEEEeeccCCCc-----cEEEecCcEEee-------CCCceeEEecCC-------ceeEEEEEEEe
Q psy16426 61 QNQLVGAMEGDQMTLECHSEAYPKSI-----NYWTKENGEIIA-------QGSKYEPILLDN-------AYKIHMKLTIK 121 (194)
Q Consensus 61 ~~~~~~~~~g~~~~l~C~~~~~p~p~-----v~W~~~~~~~~~-------~~~~~~~~~~~~-------~~~~~~~L~i~ 121 (194)
.+....+..|+++.|.|.+.+.|.+. +.|++++..... ...... ..... .....++|.|.
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~sL~I~ 87 (248)
T 3pv7_A 9 AGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQE-AFRPGAIVSPWRLKSGDASLRLP 87 (248)
T ss_dssp TTSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEE-ESSTTCBCCHHHHTTTBCCEEES
T ss_pred CCCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCccc-ccCCceEEEeccCCCCcEEEEeC
Confidence 34556788999999999998887765 899985322110 000000 00000 00113469999
Q ss_pred ecCCCCCeEEEEEEEcCCCceEEEEEEEcccCCC
Q psy16426 122 AVTKQDFGAYKCVSKNSLGDTDGSIKLYGKKKKK 155 (194)
Q Consensus 122 ~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~p~ 155 (194)
+++.+|.|.|+|.+.|..+.....+.|.|...|.
T Consensus 88 ~v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~P~ 121 (248)
T 3pv7_A 88 GIQLEEAGEYRCEVVVTPLKAQGTVQLEVVASPA 121 (248)
T ss_dssp SCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCE
T ss_pred CCCHHHCeEEEEEEEeCCccceeEEEEEEecCCc
Confidence 9999999999999999888777778887766443
No 420
>2q87_A CMRF35-H antigen; all-beta, immunoglobulin, IG-superfamily, IG-V, NKP44-like, natural killer cell IG-like receptor, inhibitory receptor; 1.70A {Homo sapiens}
Probab=98.67 E-value=4.9e-08 Score=63.91 Aligned_cols=86 Identities=15% Similarity=0.300 Sum_probs=54.2
Q ss_pred ceeEEeeCCeEEEEEEeeccC-CCccEEEecCcEE-----ee-------CCCceeEEecCCceeEEEEEEEeecCCCCCe
Q psy16426 63 QLVGAMEGDQMTLECHSEAYP-KSINYWTKENGEI-----IA-------QGSKYEPILLDNAYKIHMKLTIKAVTKQDFG 129 (194)
Q Consensus 63 ~~~~~~~g~~~~l~C~~~~~p-~p~v~W~~~~~~~-----~~-------~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g 129 (194)
..+.+.+|+++.|.|...+.. .+.+.|++..... .. ...++.... .......+|+|.+++.+|+|
T Consensus 4 ~~v~~~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~R~~~~~--~~~~~~~~L~I~~~~~~DsG 81 (110)
T 2q87_A 4 RTVAGPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFLCDKIVETKGSAGKRNGRVSIRD--SPANLSFTVTLENLTEEDAG 81 (110)
T ss_dssp EEEEECTTSCEEEEEECCGGGTTSEEEEESCCSSSSCCCSEESSSTTCSEETTEEEEE--EGGGTEEEEEESSCCGGGCE
T ss_pred cEEEEeCCCcEEEEeEecCCcCCceEEEEecCCCCCCeEEEEeCCccccccCCEEEEE--cCcCCEEEEEEccCCHHHCE
Confidence 456678999999999987643 3578999843211 10 011222111 00112468999999999999
Q ss_pred EEEEEEEcCC-C---ceEEEEEEEc
Q psy16426 130 AYKCVSKNSL-G---DTDGSIKLYG 150 (194)
Q Consensus 130 ~y~C~a~n~~-g---~~~~~~~l~v 150 (194)
.|.|.+.+.. | .....+.|.|
T Consensus 82 ~Y~C~~~~~~~g~~~~~~~~v~v~V 106 (110)
T 2q87_A 82 TYWCGVDTPWLQDFHDPVVEVEVSV 106 (110)
T ss_dssp EEEEEEECTTSCCBCCCSEEEEEEE
T ss_pred EEEEEEecCccCccCCccEEEEEEE
Confidence 9999999875 4 2233445544
No 421
>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptv_A
Probab=98.67 E-value=3.1e-08 Score=64.82 Aligned_cols=83 Identities=22% Similarity=0.241 Sum_probs=56.5
Q ss_pred ceeEEeeCCeEEEEEEe-eccCCCccEEEecCcE-Eee--CC-----------CceeEEecCCceeEEEEEEEeecCCCC
Q psy16426 63 QLVGAMEGDQMTLECHS-EAYPKSINYWTKENGE-IIA--QG-----------SKYEPILLDNAYKIHMKLTIKAVTKQD 127 (194)
Q Consensus 63 ~~~~~~~g~~~~l~C~~-~~~p~p~v~W~~~~~~-~~~--~~-----------~~~~~~~~~~~~~~~~~L~i~~~~~~d 127 (194)
..+.+.+|+++.|.|.. .+.+.+.+.|++..+. +.. .. .++. ... ...+|.|.+++.+|
T Consensus 11 ~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~i~~~~~~~~~~~~~~~~~~R~~--~~~----~~~sL~I~~v~~~D 84 (110)
T 2ptt_A 11 PDINAYTGSNVTLKIHKDPLGPYRRITWLHTKNQKILEYNYNSTKTIFESEFKGRVY--LEE----NNGALHISNVRKED 84 (110)
T ss_dssp CSEEEETTSCEEECSCSSCCCSCSEEEEEESTTBEEEEEETTSCEEECSSTTTTTEE--ECT----TTCCEEESSCCGGG
T ss_pred CCEEEecCCcEEEeCCccCCCCcCEEEEEecCCccEEEEECCCCceeeccccCCcEE--EeC----CCccEEECCCCccc
Confidence 45678899999999998 5666678999984333 211 00 1111 110 13589999999999
Q ss_pred CeEEEEEEEcCCCceEEEEEEEccc
Q psy16426 128 FGAYKCVSKNSLGDTDGSIKLYGKK 152 (194)
Q Consensus 128 ~g~y~C~a~n~~g~~~~~~~l~v~~ 152 (194)
+|.|+|.+.+.. .....+.|.|.+
T Consensus 85 sG~Y~C~v~~~~-~~~~~~~L~V~d 108 (110)
T 2ptt_A 85 KGTYYMRVLRET-ENELKITLEVFD 108 (110)
T ss_dssp CEEEEEEEESSS-BCCEEEEEEEEC
T ss_pred CeEEEEEEEcCC-CcEEEEEEEEEc
Confidence 999999998765 344467777653
No 422
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin mucin, signaling protein; 1.95A {Mus musculus} PDB: 3kaa_A*
Probab=98.67 E-value=1.9e-08 Score=65.38 Aligned_cols=85 Identities=24% Similarity=0.251 Sum_probs=54.5
Q ss_pred eeEEeeCCeEEEEEEeeccCC---CccEEEecCcE-------Ee-eC--------CCceeEEecCCceeEEEEEEEeecC
Q psy16426 64 LVGAMEGDQMTLECHSEAYPK---SINYWTKENGE-------II-AQ--------GSKYEPILLDNAYKIHMKLTIKAVT 124 (194)
Q Consensus 64 ~~~~~~g~~~~l~C~~~~~p~---p~v~W~~~~~~-------~~-~~--------~~~~~~~~~~~~~~~~~~L~i~~~~ 124 (194)
.+.+..|+++.|.|...+.+. ..+.|++.+.. +. .. ..++. ..........+|.|.+++
T Consensus 3 ~v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~~~~~~r~~--~~~~~~~~~~sL~I~~v~ 80 (109)
T 2oyp_A 3 GYKVEVGKNAYLPCSYTLPTSGTLVPMCWGKGFCPWSQCTNELLRTDERNVTYQKSSRYQ--LKGDLNKGDVSLIIKNVT 80 (109)
T ss_dssp EEEECTTSCEEECCBCCCCTTCCCCCEEEESSSCCSSSCSSEEEEECSSSEEEESCTTEE--ECSCGGGTBCCEEECSCC
T ss_pred CEEEEcCCCEEEEEEeECCCCCCeEEEEEEecCCCCCCceeEEEEcCCcCccccccceEE--EccCccCCcEeEEEccCC
Confidence 356788999999999876543 34889984321 11 01 11111 111101123589999999
Q ss_pred CCCCeEEEEEEEcCCCceEEEEEEEc
Q psy16426 125 KQDFGAYKCVSKNSLGDTDGSIKLYG 150 (194)
Q Consensus 125 ~~d~g~y~C~a~n~~g~~~~~~~l~v 150 (194)
.+|.|.|.|.+.+..+.....+.|.|
T Consensus 81 ~~D~G~Y~C~v~~~~~~~~~~~~l~V 106 (109)
T 2oyp_A 81 LDDHGTYCCRIQFPGLMNDKKLELKL 106 (109)
T ss_dssp GGGCEEEEEEECCSSTTCCEEEEEEE
T ss_pred ChhCeEEEEEEEcCCcccceEEEEEE
Confidence 99999999999998766666666554
No 423
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=98.66 E-value=2.7e-07 Score=68.50 Aligned_cols=78 Identities=19% Similarity=0.265 Sum_probs=54.4
Q ss_pred EEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCc--E--Ee-e----------CCCceeEEecCCceeEEEEEEEee
Q psy16426 58 IWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENG--E--II-A----------QGSKYEPILLDNAYKIHMKLTIKA 122 (194)
Q Consensus 58 i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~--~--~~-~----------~~~~~~~~~~~~~~~~~~~L~i~~ 122 (194)
+...+..+.+.+|+++.|.|.+.+.+.+.+.|++... . .. . ...++...... ....+|.|.+
T Consensus 4 v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~---~~~~sL~I~~ 80 (245)
T 3nfj_J 4 IHQWPATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQ---DRQFILSSKK 80 (245)
T ss_dssp EEEECSEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEE---TTEEEEEESS
T ss_pred eeCCCceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecC---CCEEEEEECC
Confidence 4455667788999999999999988889999997321 0 00 0 01122211100 1245899999
Q ss_pred cCCCCCeEEEEEEEcC
Q psy16426 123 VTKQDFGAYKCVSKNS 138 (194)
Q Consensus 123 ~~~~d~g~y~C~a~n~ 138 (194)
++.+|.|.|+|.+.|.
T Consensus 81 v~~~D~G~Y~C~~~~~ 96 (245)
T 3nfj_J 81 LLLSDSGFYLCAWSVS 96 (245)
T ss_dssp CCGGGCEEEEEEEECC
T ss_pred CChhhCEEEEEEEeec
Confidence 9999999999999993
No 424
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=98.66 E-value=2.9e-08 Score=64.95 Aligned_cols=44 Identities=20% Similarity=0.419 Sum_probs=40.2
Q ss_pred ccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceE
Q psy16426 7 NVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEI 50 (194)
Q Consensus 7 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l 50 (194)
..||.|...+.++.+.+|++++|.|.+.|.|.|.|.|++++..+
T Consensus 11 ~~pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l 54 (107)
T 3knb_B 11 GSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQL 54 (107)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEEC
T ss_pred CCCCEEEeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccc
Confidence 36899999999999999999999999999999999999988653
No 425
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=98.66 E-value=3.5e-08 Score=74.13 Aligned_cols=95 Identities=9% Similarity=0.116 Sum_probs=51.8
Q ss_pred CeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCc----EEe-eCC--C-----------ceeEEecCCceeEEEE
Q psy16426 56 PMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENG----EII-AQG--S-----------KYEPILLDNAYKIHMK 117 (194)
Q Consensus 56 p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~----~~~-~~~--~-----------~~~~~~~~~~~~~~~~ 117 (194)
|.+...+..+.+.+|+++.|.|.+.+.+.+.+.|++... ... ... . ++. ...+ ......+
T Consensus 3 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~-~~~~-~~~~~~~ 80 (259)
T 3omz_A 3 SNLEGRTKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKY-DTYG-STRKNLR 80 (259)
T ss_dssp --------CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTE-EEEC-C--CCCE
T ss_pred cccccCCceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCccee-Eeec-CCCCeEE
Confidence 445556667888999999999999988888999997321 110 000 0 000 0000 0112347
Q ss_pred EEEeecCCCCCeEEEEEEEcCCCc---eEEEEEEEccc
Q psy16426 118 LTIKAVTKQDFGAYKCVSKNSLGD---TDGSIKLYGKK 152 (194)
Q Consensus 118 L~i~~~~~~d~g~y~C~a~n~~g~---~~~~~~l~v~~ 152 (194)
|.|.+++.+|+|.|+|.+.|..+. ......|.|..
T Consensus 81 L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~ 118 (259)
T 3omz_A 81 MILRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTD 118 (259)
T ss_dssp EEESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC
T ss_pred EEECCCCcccCEEEEEEEeeCCccccEECCCCEEEEec
Confidence 999999999999999999997652 22334555544
No 426
>3kg5_A B-cell antigen receptor complex-associated protei chain; CD79B, IG-beta, BCR, immunoglobulin domain, protein binding; 3.20A {Homo sapiens}
Probab=98.66 E-value=3.7e-07 Score=62.14 Aligned_cols=94 Identities=17% Similarity=0.254 Sum_probs=61.0
Q ss_pred EEeccceeEEeeCCeEEEEEEeeccCCCccEEEec-C-cE---Ee-eCCCceeEEecCCceeEEEEEEEeecCCCCCeEE
Q psy16426 58 IWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKE-N-GE---II-AQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAY 131 (194)
Q Consensus 58 i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~-~-~~---~~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y 131 (194)
+...+..+.+.+|+.+.|.|.+.+. ...++||+. . +. .+ ....++.... +. ...+|+|.+++.+|+|.|
T Consensus 21 v~Q~p~~~~v~~G~svtL~C~~s~~-~~~v~Wyrq~~~g~~~~~l~~~~~rf~~~~-~~---~~~~L~I~~~~~~Dsg~Y 95 (134)
T 3kg5_A 21 IWQSPRFIARKRGFTVKMHCYMNSA-SGNVSWLWKQEMDENPQQLKLEKGRMEESQ-NE---SLATLTIQGIRFEDNGIY 95 (134)
T ss_dssp CEEECSEEEEETTCCEEEEEECCCT-TCCCEEEEESSSSSCCEECCCCTTTEEEEE-CS---SEEEEEECSCCTTTCEEE
T ss_pred EEEeCCEEEEeCCCCEEEEEEECCC-CceEEEEEECCCCCCcEEEEEECCeEEEEc-cC---CEEEEEECCCCcCcCEEE
Confidence 4445566778999999999998765 577899985 2 21 11 1234554332 22 256999999999999999
Q ss_pred EEEEEcCCCc---eEEEEEEEcccCCCC
Q psy16426 132 KCVSKNSLGD---TDGSIKLYGKKKKKK 156 (194)
Q Consensus 132 ~C~a~n~~g~---~~~~~~l~v~~~p~~ 156 (194)
+|.+.+..+. ......|.|...|..
T Consensus 96 ~C~~~~~~~~~~~fg~GT~L~V~~~p~~ 123 (134)
T 3kg5_A 96 FCQQKCNNTSEVYQGCGTELRVMGFSTL 123 (134)
T ss_dssp EEEEECTTTCCEEECCCEEEEEECC---
T ss_pred EEEEEcCCCCceEECCCEEEEEecCCCH
Confidence 9999886321 122356666655443
No 427
>1sq2_N Novel antigen receptor; immunoglobulin fold, protein-protein complex, hydrolase/immune system complex; 1.45A {Ginglymostoma cirratum} SCOP: b.1.1.1 PDB: 1t6v_N
Probab=98.65 E-value=1.5e-07 Score=62.08 Aligned_cols=79 Identities=20% Similarity=0.373 Sum_probs=53.5
Q ss_pred EEeccceeEEeeCCeEEEEEEeeccC--CCccEEEecCc-E----EeeCCCceeEEecCCceeEEEEEEEeecCCCCCeE
Q psy16426 58 IWIQNQLVGAMEGDQMTLECHSEAYP--KSINYWTKENG-E----IIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGA 130 (194)
Q Consensus 58 i~~~~~~~~~~~g~~~~l~C~~~~~p--~p~v~W~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~ 130 (194)
+...+..+.+.+|+++.|.|.+.+.+ .+.+.|++... . +.....++....... ....+|.|.+++.+|+|.
T Consensus 3 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~r~~~~~~~~--~~~~~L~I~~~~~~DsG~ 80 (113)
T 1sq2_N 3 VDQTPRSVTKETGESLTINCVLRDASYALGSTCWYRKKSGEGNEESISKGGRYVETVNSG--SKSFSLRINDLTVEDGGT 80 (113)
T ss_dssp EEEECSEEEECTTCCEEEEEEECSCSSCCCCEEEEEEETTSCCCEECCCBTTEEEEEETT--TTEEEEEECSCCGGGCEE
T ss_pred eEeCCccEEEecCCCEEEEEEECCCcCCCCEEEEEEeCCCCCceEeEEeCCCEEEEEeCC--CCEEEEEECCCChhhCEE
Confidence 34455677788999999999987655 56799998431 1 111223443221111 124689999999999999
Q ss_pred EEEEEEcC
Q psy16426 131 YKCVSKNS 138 (194)
Q Consensus 131 y~C~a~n~ 138 (194)
|.|.+.+.
T Consensus 81 Y~C~~~~~ 88 (113)
T 1sq2_N 81 YRCGLGVA 88 (113)
T ss_dssp EEEEECBT
T ss_pred EEEEEEeC
Confidence 99999873
No 428
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=98.65 E-value=7.2e-08 Score=70.62 Aligned_cols=98 Identities=19% Similarity=0.310 Sum_probs=65.4
Q ss_pred ccceeEEeeCCeEEEEEEeeccCC-CccEEEecCcEE----ee----CCCceeEEec--CCc-----eeEEEEEEEeecC
Q psy16426 61 QNQLVGAMEGDQMTLECHSEAYPK-SINYWTKENGEI----IA----QGSKYEPILL--DNA-----YKIHMKLTIKAVT 124 (194)
Q Consensus 61 ~~~~~~~~~g~~~~l~C~~~~~p~-p~v~W~~~~~~~----~~----~~~~~~~~~~--~~~-----~~~~~~L~i~~~~ 124 (194)
.+..+.+.+|+.+.|.|.+.+.+. +.+.|++++... +. ....+..... ... ....+.|.|.+++
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~L~i~~v~ 85 (231)
T 2pet_A 6 VPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGRLVLAEAQ 85 (231)
T ss_dssp CCSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCCEEESSCC
T ss_pred CCCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCceEEEcccC
Confidence 345677889999999999998884 889999743321 11 0111111110 000 0001249999999
Q ss_pred CCCCeEEEEEEEcCC-CceEEEEEEEcccCCCCCh
Q psy16426 125 KQDFGAYKCVSKNSL-GDTDGSIKLYGKKKKKKKK 158 (194)
Q Consensus 125 ~~d~g~y~C~a~n~~-g~~~~~~~l~v~~~p~~p~ 158 (194)
.+|.|.|+|.+.|.. +.....+.|.|...|..|.
T Consensus 86 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~ 120 (231)
T 2pet_A 86 VGDERDYVCVVRAGAAGTAEATARLNVFAKPEATE 120 (231)
T ss_dssp GGGCEEEEEEEECGGGCEEEEEEEEEEEBCCCCCE
T ss_pred cccCceEEEEEEecCCCceEEEEEEEEEecCCCcE
Confidence 999999999999987 7777788888887766554
No 429
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=98.65 E-value=1.9e-08 Score=64.94 Aligned_cols=43 Identities=23% Similarity=0.382 Sum_probs=39.3
Q ss_pred cCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceE
Q psy16426 8 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEI 50 (194)
Q Consensus 8 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l 50 (194)
.||.|...+.++.+.+|++++|.|.+.|.|.|.|.|++++..+
T Consensus 4 ~PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i 46 (100)
T 3knb_A 4 IPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKI 46 (100)
T ss_dssp EEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEEC
T ss_pred CCCEEEeCCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEe
Confidence 5799988889999999999999999999999999999987653
No 430
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.65 E-value=8.7e-08 Score=69.53 Aligned_cols=72 Identities=21% Similarity=0.432 Sum_probs=51.6
Q ss_pred cceeEEeeCCeEEEEEEeeccCCCccEEEecC-cEEee------------CCCceeEEecCCceeEEEEEEEeecCCCCC
Q psy16426 62 NQLVGAMEGDQMTLECHSEAYPKSINYWTKEN-GEIIA------------QGSKYEPILLDNAYKIHMKLTIKAVTKQDF 128 (194)
Q Consensus 62 ~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~-~~~~~------------~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 128 (194)
+..+.+.+|+.+.|.|.+.+.+.+.+.|++++ +.... ...++...... ...+|.|.+++.+|.
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~----~~~~L~I~~v~~~D~ 81 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSG----TTATLTISGAQPEDE 81 (212)
T ss_dssp CSEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEET----TEEEEEETTCCGGGC
T ss_pred CCeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeC----CEEEEEECcCCcccC
Confidence 56677889999999999988887889999743 21110 01233221111 145899999999999
Q ss_pred eEEEEEEEc
Q psy16426 129 GAYKCVSKN 137 (194)
Q Consensus 129 g~y~C~a~n 137 (194)
|.|+|.+.|
T Consensus 82 G~Y~C~~~n 90 (212)
T 1nfd_E 82 AAYYCLSSY 90 (212)
T ss_dssp SEEEEEEEE
T ss_pred EEEEEEEEc
Confidence 999999997
No 431
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=98.65 E-value=2.3e-08 Score=74.65 Aligned_cols=76 Identities=11% Similarity=0.059 Sum_probs=54.0
Q ss_pred EeeCCeEEEEEEeecc---CCC-ccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCce
Q psy16426 67 AMEGDQMTLECHSEAY---PKS-INYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDT 142 (194)
Q Consensus 67 ~~~g~~~~l~C~~~~~---p~p-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~ 142 (194)
+.+|+++.|.|.+.+. |.+ .+.|+++++.+............++.+...+.|.|.++..+|.|.|+|.+.|..+..
T Consensus 29 v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~ 108 (239)
T 1i1c_A 29 LGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGKTFKCKVNSGAFPA 108 (239)
T ss_dssp TTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECSSSSS
T ss_pred cccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCCCeEEEEEecccCCC
Confidence 5689999999999887 655 799999554432111001111223345566789999999999999999999988754
No 432
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=98.65 E-value=1.6e-06 Score=65.46 Aligned_cols=116 Identities=19% Similarity=0.223 Sum_probs=74.4
Q ss_pred CeEEEcCCeeeeeCCCcEEEEeeeec-cC---CceeEEEecCceEE----------------------------------
Q psy16426 10 PMIWIQNQLVGAMEGDQMTLECHSEA-YP---KSINYWTKENGEII---------------------------------- 51 (194)
Q Consensus 10 P~~~~~~~~~~v~~G~~v~L~C~~~g-~p---~~~v~W~k~~~~l~---------------------------------- 51 (194)
+.+.+.|....+..|+.++|+|.+.+ .| ...|.|++++..+.
T Consensus 3 ~tVs~~P~~~~i~~GdsVTLTatVaGGkP~pspyTYqWyKDG~~IsGaT~tLti~s~t~sdSG~YqCvVTDa~Gcs~tSs 82 (304)
T 3shs_A 3 FTVSIQSNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHENNTATLTVADATSENAGSYKVTVQDTDTMTSVES 82 (304)
T ss_dssp EEEEEEESCSSBCTTCCEEEEEEEEESSSCCCCEEEEEEETTEECSCCSSEEEESSCCGGGCEEEEEEEEETTTCCEEEC
T ss_pred cEEEeCCCCccccCCCCEEEEEEecCCCCCCCCceEEEEECCccccCCcceEEeeeccccCCeEEEEEEEECCCCeeeee
Confidence 46777888888899999999999765 45 44899999873321
Q ss_pred ---EeeCC--eEEe-ccceeEEeeCCeEEEEEEe--ec-cC-----CCccEEEecCcEEeeCCCceeEEecCCceeEEEE
Q psy16426 52 ---AQVPP--MIWI-QNQLVGAMEGDQMTLECHS--EA-YP-----KSINYWTKENGEIIAQGSKYEPILLDNAYKIHMK 117 (194)
Q Consensus 52 ---v~~~p--~i~~-~~~~~~~~~g~~~~l~C~~--~~-~p-----~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (194)
|..++ .+.+ .+....+..+..+.|.+.+ .| .+ ..+.+|+++ +..+... ..
T Consensus 83 ~VtVT~~a~l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKn-gt~IsgA---------------q~ 146 (304)
T 3shs_A 83 EVFLMEEAELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKG-EDVIDTT---------------QD 146 (304)
T ss_dssp CCEEECBCCEEEEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEET-TEEEESS---------------SE
T ss_pred eEEEeccCceeEEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeC-CeEccCc---------------cc
Confidence 11111 1111 1233334456778888776 43 33 246779994 4433221 14
Q ss_pred EEEeecCCCCCeEEEEEEEcCCCc
Q psy16426 118 LTIKAVTKQDFGAYKCVSKNSLGD 141 (194)
Q Consensus 118 L~i~~~~~~d~g~y~C~a~n~~g~ 141 (194)
|++......+.|.|.|.+.|..+.
T Consensus 147 lT~sS~TateaG~YtV~VTn~~~~ 170 (304)
T 3shs_A 147 ITIQEFTADKNGVYTVKVWGESED 170 (304)
T ss_dssp EEECSCCGGGCEEEEEEEESSSGG
T ss_pred cceeeEEecCCeEEEEEEEcCCCC
Confidence 555666778999999999998763
No 433
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=98.65 E-value=1.7e-08 Score=62.70 Aligned_cols=59 Identities=22% Similarity=0.453 Sum_probs=45.1
Q ss_pred ceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeec-CCCCCeEEEEEEEc
Q psy16426 63 QLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAV-TKQDFGAYKCVSKN 137 (194)
Q Consensus 63 ~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~-~~~d~g~y~C~a~n 137 (194)
....+..|+++.|.|.+.+.|. ++|++ ++..+... . ..+|.|.++ ..+|+|.|+|.|.+
T Consensus 7 ~~~v~~~G~~v~L~C~~~g~P~--i~W~k-dg~~l~~~--------~-----~~~L~I~~v~~~~DsG~Y~C~A~t 66 (82)
T 3r08_E 7 EYKVSISGTSVELTCPLDSDEN--LKWEK-NGQELPQK--------H-----DKHLVLQDFSEVEDSGYYVCYTPA 66 (82)
T ss_dssp CCEEEEETTEEEEECSSCCCSS--CEEEE-TTEECTTC--------C-----SSCCBCCSCCTTTTCSCEEEECSS
T ss_pred ceeEEEcCCeEEEEEECCCCCc--EEEEE-CCEECcCC--------C-----CCEEEECccCccCcCEEEEEEEcc
Confidence 4455678999999999998873 99999 55544322 1 137899996 77999999999876
No 434
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=98.64 E-value=2.1e-07 Score=69.29 Aligned_cols=92 Identities=22% Similarity=0.346 Sum_probs=60.6
Q ss_pred eEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCc----EEe-e--------CCCceeEEecCCceeEEEEEEEeec
Q psy16426 57 MIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENG----EII-A--------QGSKYEPILLDNAYKIHMKLTIKAV 123 (194)
Q Consensus 57 ~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~----~~~-~--------~~~~~~~~~~~~~~~~~~~L~i~~~ 123 (194)
.+...+..+.+.+|+.+.|.|.+.+.+.+.+.|++.+. ..+ . ...++..... ....+|.|.++
T Consensus 6 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~----~~~~~L~I~~v 81 (250)
T 3esu_F 6 VLIQSTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGS----GTDYSLTISNL 81 (250)
T ss_dssp CEECSCSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEE----TTEEEEEESSC
T ss_pred eEEecCCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCC----CCEEEEEEccC
Confidence 34555667778899999999999999999999998431 111 0 0112221111 11358999999
Q ss_pred CCCCCeEEEEEEEcCCCceE-EEEEEEccc
Q psy16426 124 TKQDFGAYKCVSKNSLGDTD-GSIKLYGKK 152 (194)
Q Consensus 124 ~~~d~g~y~C~a~n~~g~~~-~~~~l~v~~ 152 (194)
+.+|.|.|+|.+.|..+... ....|.|..
T Consensus 82 ~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~ 111 (250)
T 3esu_F 82 EQEDIGTYFCQQGNTLPWTFGGGTKLEIRR 111 (250)
T ss_dssp CGGGCEEEEEEECSSSSCEECCCEEEEEC-
T ss_pred ChhhCEEEEEEEeeCCCceECCCEEEEEEC
Confidence 99999999999998765422 223454443
No 435
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=98.64 E-value=6e-08 Score=69.82 Aligned_cols=94 Identities=15% Similarity=0.163 Sum_probs=61.0
Q ss_pred cceeEEeeCCeEEEEEEeec-cCCCccEEEecCcEEe--eCCC-c-eeEEecCC----ce--eEEEEEEEeecCCCCCeE
Q psy16426 62 NQLVGAMEGDQMTLECHSEA-YPKSINYWTKENGEII--AQGS-K-YEPILLDN----AY--KIHMKLTIKAVTKQDFGA 130 (194)
Q Consensus 62 ~~~~~~~~g~~~~l~C~~~~-~p~p~v~W~~~~~~~~--~~~~-~-~~~~~~~~----~~--~~~~~L~i~~~~~~d~g~ 130 (194)
+..+.+.+|+++.|.|.+.+ .+.+.+.|++++..+. .... . ......+. .+ ....+|.|.+++.+|.|.
T Consensus 5 p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~D~G~ 84 (193)
T 2if7_A 5 PLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKMEDTGS 84 (193)
T ss_dssp CEEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEECTTCCEEECSCCGGGCEE
T ss_pred CeEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEECCCeEEEECCCCcccCce
Confidence 45567889999999999875 3456889998432221 1110 0 00000000 00 013589999999999999
Q ss_pred EEEEEEcCCCceEEEEEEEcccCCC
Q psy16426 131 YKCVSKNSLGDTDGSIKLYGKKKKK 155 (194)
Q Consensus 131 y~C~a~n~~g~~~~~~~l~v~~~p~ 155 (194)
|.|.+.|..+.....+.|.|...+.
T Consensus 85 Y~C~~~~~~~~~~~~~~L~V~~~~~ 109 (193)
T 2if7_A 85 YRAQISTKTSAKLSSYTLRILRQLR 109 (193)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCE
T ss_pred EEEEEEecCCCeEEEEEEEEEccCC
Confidence 9999999988766777787765543
No 436
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=98.64 E-value=1.7e-07 Score=68.16 Aligned_cols=75 Identities=16% Similarity=0.224 Sum_probs=51.1
Q ss_pred cceeEEeeCCeEEEEEEee-ccC-CCccEEEecCc-EE---ee---------CCCceeEEecCCceeEEEEEEEeecCCC
Q psy16426 62 NQLVGAMEGDQMTLECHSE-AYP-KSINYWTKENG-EI---IA---------QGSKYEPILLDNAYKIHMKLTIKAVTKQ 126 (194)
Q Consensus 62 ~~~~~~~~g~~~~l~C~~~-~~p-~p~v~W~~~~~-~~---~~---------~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 126 (194)
+....+.+|+++.|.|.+. +.+ .+.+.|++++. .. .. ...++..... ...++|.|.+++.+
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~----~~~~~L~I~~v~~~ 82 (216)
T 2xzc_L 7 PPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKS----GTSATLGITGLQTG 82 (216)
T ss_dssp CSEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEE----TTEEEEEECSCCGG
T ss_pred CCcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEecc----CCEEEEEECCCCcc
Confidence 4567788999999999954 432 57899998432 11 00 0123321111 12458999999999
Q ss_pred CCeEEEEEEEcCCC
Q psy16426 127 DFGAYKCVSKNSLG 140 (194)
Q Consensus 127 d~g~y~C~a~n~~g 140 (194)
|.|.|+|.+.|..+
T Consensus 83 D~G~Y~C~~~~~~~ 96 (216)
T 2xzc_L 83 DEADYYCGTWDSSL 96 (216)
T ss_dssp GCEEEEEEEECTTS
T ss_pred cCEEEEEEEEeCCC
Confidence 99999999999876
No 437
>1eeq_A Kappa-4 immunoglobulin (light chain); protein stability, hydrogen bonds, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 PDB: 1eeu_A 1lve_A 2lve_A 3lve_A 5lve_A 4lve_A 1efq_A 1qac_A 1ek3_A 2imm_A 1mvu_A 2ap2_A 1ap2_A 3bd3_A* 3bd4_A* 3bd5_A* 2imn_A 3dus_A* 3duu_A* 3dv4_A* ...
Probab=98.63 E-value=1.3e-07 Score=62.25 Aligned_cols=77 Identities=18% Similarity=0.299 Sum_probs=52.7
Q ss_pred EEeccceeEEeeCCeEEEEEEeeccC------CCccEEEecCc----E-EeeC--------CCceeEEecCCceeEEEEE
Q psy16426 58 IWIQNQLVGAMEGDQMTLECHSEAYP------KSINYWTKENG----E-IIAQ--------GSKYEPILLDNAYKIHMKL 118 (194)
Q Consensus 58 i~~~~~~~~~~~g~~~~l~C~~~~~p------~p~v~W~~~~~----~-~~~~--------~~~~~~~~~~~~~~~~~~L 118 (194)
+...+..+.+.+|+++.|.|.+.+.+ .+.++|++... . +... ..++..... ....+|
T Consensus 4 v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~----~~~~~L 79 (114)
T 1eeq_A 4 LTQSPDSLAVSLGERATINCKSSQSVLDSSNSKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGS----GTDFTL 79 (114)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE----TTEEEE
T ss_pred eEecCCeEEEcCCCeEEEEEEcCCCccccccCCccEEEEEECCCCCCEEEEEecCccCCCCCCCEEEeec----CCEEEE
Confidence 34455677889999999999987765 36789998531 1 1111 123322111 124589
Q ss_pred EEeecCCCCCeEEEEEEEcC
Q psy16426 119 TIKAVTKQDFGAYKCVSKNS 138 (194)
Q Consensus 119 ~i~~~~~~d~g~y~C~a~n~ 138 (194)
.|.+++.+|.|.|.|.+.+.
T Consensus 80 ~I~~v~~~DsG~Y~C~~~~~ 99 (114)
T 1eeq_A 80 TISSLQAEDVAVYYCQQYYS 99 (114)
T ss_dssp EESSCCGGGCEEEEEEECSS
T ss_pred EECCCCcccCEEEEEEEeeC
Confidence 99999999999999999875
No 438
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=98.63 E-value=2.7e-08 Score=71.19 Aligned_cols=78 Identities=22% Similarity=0.284 Sum_probs=56.0
Q ss_pred ccceeEEeeCCeEEEEEE-eeccCC-CccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcC
Q psy16426 61 QNQLVGAMEGDQMTLECH-SEAYPK-SINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNS 138 (194)
Q Consensus 61 ~~~~~~~~~g~~~~l~C~-~~~~p~-p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~ 138 (194)
....+.+.+|+.+.|.|. +.+.|. +.+.|++++..+.............+ .+|.|.++..+|.|.|+|.+.|.
T Consensus 14 ~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~-----~~L~i~~v~~~d~G~Y~C~~~~~ 88 (201)
T 3s97_C 14 ERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTN-----GNLYIANVEASDKGNYSCFVSSP 88 (201)
T ss_dssp CCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTT-----CCEEESSCCGGGCEEEEEEEEEG
T ss_pred CCceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCC-----CeEEECcCCcccCeEEEEEEEec
Confidence 345677889999999999 888888 89999995444322111111122222 37999999999999999999997
Q ss_pred CCceE
Q psy16426 139 LGDTD 143 (194)
Q Consensus 139 ~g~~~ 143 (194)
.+...
T Consensus 89 ~~~~~ 93 (201)
T 3s97_C 89 SITKS 93 (201)
T ss_dssp GGTEE
T ss_pred CCCcc
Confidence 66554
No 439
>2nms_A CMRF35-like-molecule 1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, inhibitory receptor, myelo-monocytic cells; 2.60A {Homo sapiens}
Probab=98.63 E-value=3.8e-07 Score=61.17 Aligned_cols=96 Identities=14% Similarity=0.232 Sum_probs=60.3
Q ss_pred ccceeEEeeCCeEEEEEEeeccC-CCccEEEecCc-----EEeeCC--------CceeEEecCCceeEEEEEEEeecCCC
Q psy16426 61 QNQLVGAMEGDQMTLECHSEAYP-KSINYWTKENG-----EIIAQG--------SKYEPILLDNAYKIHMKLTIKAVTKQ 126 (194)
Q Consensus 61 ~~~~~~~~~g~~~~l~C~~~~~p-~p~v~W~~~~~-----~~~~~~--------~~~~~~~~~~~~~~~~~L~i~~~~~~ 126 (194)
.+..+.+.+|+.+.|.|...... ...+.|++... .++... .++... ++......+|.|.+++.+
T Consensus 8 ~p~~v~~~~G~svtL~C~~s~~~~~~~~~W~rq~~~~~~~~li~~~~~~~~~~~~R~~~~--~~~~~~~~sL~I~~l~~~ 85 (124)
T 2nms_A 8 GPTTVNGLERGSLTVQCVYRSGWETYLKWWCRGAIWRDCKILVKTSGSEQEVKRDRVSIK--DNQKNRTFTVTMEDLMKT 85 (124)
T ss_dssp CCSEEEEETTCCEEEEEEECTTCTTSEEEEEESSSSTTCEEEEECCSSSCCEEETTEEEE--EETTTTEEEEEECSCCGG
T ss_pred cccEEEEeCCCCEEEEeEEeCCcccccEEEEeCCCCCCceEEEEcCCcccceeCCCEEEE--EcCcCCEEEEEEeCCCHH
Confidence 34566788999999999986543 23588997432 111111 122211 111112468999999999
Q ss_pred CCeEEEEEEEcCCCceEEEEEEEcccCCCCCh
Q psy16426 127 DFGAYKCVSKNSLGDTDGSIKLYGKKKKKKKK 158 (194)
Q Consensus 127 d~g~y~C~a~n~~g~~~~~~~l~v~~~p~~p~ 158 (194)
|.|.|.|.+..........+.|.|...|.+|.
T Consensus 86 Dsg~Y~C~~~~~~~~~~~~v~L~V~~~~~~~~ 117 (124)
T 2nms_A 86 DADTYWCGIEKTGNDLGVTVQVTIDPAPVTQE 117 (124)
T ss_dssp GCEEEEEEEEETTEEEEEEEEEEEECCC----
T ss_pred HCEEEEEEEEcCCCCccEEEEEEEeCCCcCCC
Confidence 99999999987654455668888887766654
No 440
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=98.62 E-value=1.9e-07 Score=70.52 Aligned_cols=94 Identities=20% Similarity=0.318 Sum_probs=62.2
Q ss_pred CeEEeccceeEEeeCCeEEEEEEeeccC------CCccEEEecC-cE---E-ee--------CCCceeEEecCCceeEEE
Q psy16426 56 PMIWIQNQLVGAMEGDQMTLECHSEAYP------KSINYWTKEN-GE---I-IA--------QGSKYEPILLDNAYKIHM 116 (194)
Q Consensus 56 p~i~~~~~~~~~~~g~~~~l~C~~~~~p------~p~v~W~~~~-~~---~-~~--------~~~~~~~~~~~~~~~~~~ 116 (194)
+.+...+..+.+.+|+++.|.|.+.+.+ .+.+.|++.+ +. . .. ...++..... ....
T Consensus 6 ~~v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~----~~~~ 81 (264)
T 2gjj_A 6 IVLTQTPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGS----GTDF 81 (264)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEE----TTEE
T ss_pred cceEecCCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecC----CCEE
Confidence 4455666777889999999999998876 6789999843 11 1 11 0123332111 1145
Q ss_pred EEEEeecCCCCCeEEEEEEEcCCCce-EEEEEEEcccC
Q psy16426 117 KLTIKAVTKQDFGAYKCVSKNSLGDT-DGSIKLYGKKK 153 (194)
Q Consensus 117 ~L~i~~~~~~d~g~y~C~a~n~~g~~-~~~~~l~v~~~ 153 (194)
+|.|.+++.+|.|.|+|.+.|..+.. .....|.|...
T Consensus 82 ~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~ 119 (264)
T 2gjj_A 82 TLTIGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRG 119 (264)
T ss_dssp EEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC
T ss_pred EEEECCCCHHHCEEEEEEEecCCccEecCCEEEEEEcC
Confidence 89999999999999999999875431 12245555443
No 441
>1dlf_L Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 1wz1_L* 2dlf_L 1maj_A 1mak_A 1ktr_L 2cju_L* 2uud_K* 1dsf_L 3nn8_B 1n4x_L 1bfv_L* 1cfv_L* 2bfv_L* 1wt5_C
Probab=98.61 E-value=2.4e-07 Score=60.92 Aligned_cols=77 Identities=17% Similarity=0.293 Sum_probs=52.4
Q ss_pred EEeccceeEEeeCCeEEEEEEeeccC-----CCccEEEecCc----E-EeeC--------CCceeEEecCCceeEEEEEE
Q psy16426 58 IWIQNQLVGAMEGDQMTLECHSEAYP-----KSINYWTKENG----E-IIAQ--------GSKYEPILLDNAYKIHMKLT 119 (194)
Q Consensus 58 i~~~~~~~~~~~g~~~~l~C~~~~~p-----~p~v~W~~~~~----~-~~~~--------~~~~~~~~~~~~~~~~~~L~ 119 (194)
+...+..+.+.+|+++.|.|.+.+.+ .+.++|++... . +... ..++..... ....+|.
T Consensus 4 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~----~~~~~L~ 79 (113)
T 1dlf_L 4 MTQTPLSLPVSLGNQASISCRSSQSLVHSNGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGS----GTDFTLK 79 (113)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE----TTEEEEE
T ss_pred EEEeCCEEEEcCCCCEEEEEEccccccccCCCceEEEEEECCCCCCeEEEEecCccCCCCCCCEEEEcc----CCEEEEE
Confidence 34455677889999999999987655 36789997432 1 1111 122321111 1245899
Q ss_pred EeecCCCCCeEEEEEEEcC
Q psy16426 120 IKAVTKQDFGAYKCVSKNS 138 (194)
Q Consensus 120 i~~~~~~d~g~y~C~a~n~ 138 (194)
|.+++.+|+|.|.|.+.+.
T Consensus 80 I~~v~~~DsG~Y~C~~~~~ 98 (113)
T 1dlf_L 80 ISRVEAEDLGVYFCSQSTH 98 (113)
T ss_dssp ECSCCGGGCEEEEEEECSS
T ss_pred ECCCChHHCEEEEEEEecC
Confidence 9999999999999999875
No 442
>1nko_A Sialic acid binding IG-like lectin 7; immunoglobulin, siglec7, immune system; 1.45A {Homo sapiens} SCOP: b.1.1.1 PDB: 2g5r_A* 1o7v_A* 2df3_A* 1o7s_A* 2hrl_A*
Probab=98.61 E-value=8.2e-08 Score=64.90 Aligned_cols=97 Identities=14% Similarity=0.231 Sum_probs=57.8
Q ss_pred EeccceeEEeeCCeEEEEEEeec-------cCCCccEEEecCcEE-----e-eCC----------CceeEEecCCceeEE
Q psy16426 59 WIQNQLVGAMEGDQMTLECHSEA-------YPKSINYWTKENGEI-----I-AQG----------SKYEPILLDNAYKIH 115 (194)
Q Consensus 59 ~~~~~~~~~~~g~~~~l~C~~~~-------~p~p~v~W~~~~~~~-----~-~~~----------~~~~~~~~~~~~~~~ 115 (194)
...+..+.+.+|+.+.|.|.... .....+.|++..... . ... .++. ...+.....
T Consensus 10 ~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~R~~--~~~~~~~~~ 87 (132)
T 1nko_A 10 LTMQSSVTVQEGMCVHVRCSFSYPVDSDTDSDPVHGYWFRAGNDISWKAPVATNNPAWAVQEETRDRFH--LLGDPQTKN 87 (132)
T ss_dssp EEECSEEEEETTCCEEECEEEECCCCTTTTTSCCEEEEEEC-----CCSCSEESCTTCCCCGGGTTTEE--ECSCGGGTB
T ss_pred EeCCCEEEEcCCCeEEEEccccCCCccccCCCccEEEEEECCCCCCcccEEEeCCCccccccccCccEE--EeCCCCCCc
Confidence 33456678899999999999862 345678899843321 1 111 1221 111111123
Q ss_pred EEEEEeecCCCCCeEEEEEEEcCCCce---EEEEEEEcccCCCCC
Q psy16426 116 MKLTIKAVTKQDFGAYKCVSKNSLGDT---DGSIKLYGKKKKKKK 157 (194)
Q Consensus 116 ~~L~i~~~~~~d~g~y~C~a~n~~g~~---~~~~~l~v~~~p~~p 157 (194)
.+|.|.+++.+|+|.|.|.+.+..... ...+.|.|..++..|
T Consensus 88 ~sL~I~~v~~~DsG~Y~C~v~~~~~~~~~~~~~~~l~V~~~~~~p 132 (132)
T 1nko_A 88 CTLSIRDARMSDAGRYFFRMEKGNIKWNYKYDQLSVNVTALTHRP 132 (132)
T ss_dssp CCEEECSCCGGGCEEEEEEEEETTEEEECTTSCEEEEEECCC---
T ss_pred eEEEEcccCcccCeeEEEEEEcCCCcccccCCceEEEecccCCCc
Confidence 589999999999999999998753111 234667776665543
No 443
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=98.61 E-value=3.7e-07 Score=69.13 Aligned_cols=78 Identities=15% Similarity=0.300 Sum_probs=49.7
Q ss_pred eCCeEEEEEEeeccC--CCccEEEecCcEEeeCCCce-eEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCceEEE
Q psy16426 69 EGDQMTLECHSEAYP--KSINYWTKENGEIIAQGSKY-EPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDTDGS 145 (194)
Q Consensus 69 ~g~~~~l~C~~~~~p--~p~v~W~~~~~~~~~~~~~~-~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~~~~ 145 (194)
.|..+.|.|.+.+.. ++.+.| . +.......... .....++.|...+.|.|......| +.|+|.+.+..+.....
T Consensus 182 ~g~~~~l~C~~~~~~p~~~~v~W-~-~~~~~~~~~~~~~~~~~~g~y~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~ 258 (267)
T 3u1s_H 182 SGGTAALGCLVKDYFPEPVTVSW-N-SGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVD 258 (267)
T ss_dssp ETTEEEEEEEEEEEBSSCCEEEE-G-GGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEEEE
T ss_pred CCCcEEEEEEEeEEECCCeEEEE-C-CcccCCCEEeCCceECCCCCEEEEEEEEECchhcCC-CEEEEEEEECCCCcceE
Confidence 578899999998743 345778 3 33221100000 112334556667789999888888 99999999987655544
Q ss_pred EEEE
Q psy16426 146 IKLY 149 (194)
Q Consensus 146 ~~l~ 149 (194)
..+.
T Consensus 259 ~~~~ 262 (267)
T 3u1s_H 259 KKVE 262 (267)
T ss_dssp EECC
T ss_pred EEcc
Confidence 4443
No 444
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=98.60 E-value=8.2e-08 Score=69.08 Aligned_cols=90 Identities=21% Similarity=0.300 Sum_probs=59.8
Q ss_pred eeEEeeCCeEEEEEEee----ccCCCccEEEecCcEEeeC-C----------CceeEEecCCceeEEEEEEEeecCCCCC
Q psy16426 64 LVGAMEGDQMTLECHSE----AYPKSINYWTKENGEIIAQ-G----------SKYEPILLDNAYKIHMKLTIKAVTKQDF 128 (194)
Q Consensus 64 ~~~~~~g~~~~l~C~~~----~~p~p~v~W~~~~~~~~~~-~----------~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 128 (194)
.+.+..|+++.|.|.+. +.+.+.+.|++++..+... . .+... ...+ ..+|.|.+++.+|.
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~-~~~~----~~~L~I~~v~~~D~ 77 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIF-DITN----NLSIVILALRPSDE 77 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEE-ESTT----TTEEEECSCCGGGC
T ss_pred eEEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEE-ccCC----CcEEEEecccchhC
Confidence 35678899999999985 3456788899844332110 0 01110 0111 24899999999999
Q ss_pred eEEEEEEEcCCCce-----EEEEEEEcccCCCCCh
Q psy16426 129 GAYKCVSKNSLGDT-----DGSIKLYGKKKKKKKK 158 (194)
Q Consensus 129 g~y~C~a~n~~g~~-----~~~~~l~v~~~p~~p~ 158 (194)
|.|+|.+.|..|.. ...+.|.|...+..|.
T Consensus 78 G~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~p~ 112 (201)
T 1dr9_A 78 GTYECVVLKYEKDAFKREHLAEVTLSVKADFPTPS 112 (201)
T ss_dssp EEEEEEEEECCTTSCEEEEEEEEEEEEECCCCCCE
T ss_pred eEEEEEEEcCCCCccccccccEEEEEEcCCCCCCc
Confidence 99999999977654 3567777776654444
No 445
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=98.60 E-value=4e-07 Score=68.24 Aligned_cols=83 Identities=14% Similarity=0.233 Sum_probs=57.2
Q ss_pred CeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcE----Eee----------CCCceeEEecCCceeEEEEEEEe
Q psy16426 56 PMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGE----IIA----------QGSKYEPILLDNAYKIHMKLTIK 121 (194)
Q Consensus 56 p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~----~~~----------~~~~~~~~~~~~~~~~~~~L~i~ 121 (194)
..+...+..+.+.+|+++.|.|.+.+.+.+.+.|++.... ... ...++...... .....+|.|.
T Consensus 4 ~~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~~sL~I~ 81 (256)
T 3tf7_C 4 QSVTQPDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSK--SDSSFHLRKA 81 (256)
T ss_dssp CEEECSCSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEET--TTTEEEEEES
T ss_pred cEEEecCceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcC--CCCEEEEEEC
Confidence 3455566778889999999999999888899999973210 100 01122211000 0124589999
Q ss_pred ecCCCCCeEEEEEEEcCCC
Q psy16426 122 AVTKQDFGAYKCVSKNSLG 140 (194)
Q Consensus 122 ~~~~~d~g~y~C~a~n~~g 140 (194)
+++.+|.|.|+|.+.|..+
T Consensus 82 ~v~~~DsG~Y~C~~~~~~~ 100 (256)
T 3tf7_C 82 SVHRSDSAVYFCAVSAKGT 100 (256)
T ss_dssp SCCGGGCSEEEEEEECTTC
T ss_pred CCCcccCEEEEEEEecCCC
Confidence 9999999999999999765
No 446
>1ncn_A T lymphocyte activation antigen CD86; IG V, beta strands, immune system; 2.70A {Homo sapiens} SCOP: b.1.1.1 PDB: 1i85_A
Probab=98.60 E-value=2.5e-07 Score=60.38 Aligned_cols=78 Identities=15% Similarity=0.316 Sum_probs=51.9
Q ss_pred eEEeeCCeEEEEEEeeccCCC-----ccEEEecCcEEe---eCC------------CceeEEecCCceeEEEEEEEeecC
Q psy16426 65 VGAMEGDQMTLECHSEAYPKS-----INYWTKENGEII---AQG------------SKYEPILLDNAYKIHMKLTIKAVT 124 (194)
Q Consensus 65 ~~~~~g~~~~l~C~~~~~p~p-----~v~W~~~~~~~~---~~~------------~~~~~~~~~~~~~~~~~L~i~~~~ 124 (194)
+.+..|+++.|.|...+.|.+ .+.|++++.... ..+ .+.. ...+ ..+|.|.+++
T Consensus 4 v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~r~~-~~~~-----~~sL~I~~v~ 77 (110)
T 1ncn_A 4 IQAYFNETADLPCQFANSQNQSLSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTS-FDSD-----SWTLRLHNLQ 77 (110)
T ss_dssp EEEETTSCEEEECCCCCTTCCCGGGEEEEEEETTCCEEEEEETTEECCSSBCTTTTTSEE-EETT-----TTEEEECSCC
T ss_pred EEEEeCCCEEEEeEeCCCCcCCCccEEEEEEeCCCccEEEEECCcccccccCcccCCcEE-EECC-----CEEEEEcCCC
Confidence 567889999999998755433 388998543111 010 0111 1111 2489999999
Q ss_pred CCCCeEEEEEEEcCCCceEEEEEE
Q psy16426 125 KQDFGAYKCVSKNSLGDTDGSIKL 148 (194)
Q Consensus 125 ~~d~g~y~C~a~n~~g~~~~~~~l 148 (194)
.+|.|.|.|.+.+..+.....+.+
T Consensus 78 ~~D~G~Y~C~v~~~~~~~~~~~~~ 101 (110)
T 1ncn_A 78 IKDKGLYQCIIHHKKPTGMIRIHQ 101 (110)
T ss_dssp GGGCEEEEEEEEEECSSSEEEEEE
T ss_pred hHHCEEEEEEEEcCCCCceEEEEE
Confidence 999999999999887776554444
No 447
>2edo_A CD48 antigen; beta-sandwich, IG-fold, B-lymphocyte activation marker blast-1, BCM1 surface antigen, leukocyte antigen MEM-102, TCT.1; NMR {Homo sapiens}
Probab=98.60 E-value=2.5e-08 Score=66.70 Aligned_cols=95 Identities=18% Similarity=0.134 Sum_probs=59.9
Q ss_pred ceeEEeeCCeEEEEEEe-eccCCCccEEEecCcE-EeeCCCceeEEecCC----ce---eEEEEEEEeecCCCCCeEEEE
Q psy16426 63 QLVGAMEGDQMTLECHS-EAYPKSINYWTKENGE-IIAQGSKYEPILLDN----AY---KIHMKLTIKAVTKQDFGAYKC 133 (194)
Q Consensus 63 ~~~~~~~g~~~~l~C~~-~~~p~p~v~W~~~~~~-~~~~~~~~~~~~~~~----~~---~~~~~L~i~~~~~~d~g~y~C 133 (194)
..+.+.+|+++.|.|.. .......+.|++.... +........ ...+. .+ ...++|.|.+++.+|+|.|.|
T Consensus 12 ~pv~~~~G~~VtL~c~~~~~~~~~~i~W~~~~~~~i~~~~~~~~-~~~~~~f~~R~~l~~~~~sL~I~nv~~~DsG~Y~c 90 (121)
T 2edo_A 12 VHMTVVSGSNVTLNISESLPENYKQLTWFYTFDQKIVEWDSRKS-KYFESKFKGRVRLDPQSGALYISKVQKEDNSTYIM 90 (121)
T ss_dssp BCCEEETTSCEEECCSSCCCSSEEEEEEEEETTEEEEEECSSCE-EECSCTTTTTCEECTTTCCEEESSCCGGGCSEEEE
T ss_pred EEEEEEeCCCEEEeCCCCCCCceeEEEEEcCCCCeEEEEECcCC-eEeChhcCCcEEEeCCCceEEEeCCCHHHCeEEEE
Confidence 34678899999999976 3333456889985432 211110000 00000 00 013589999999999999999
Q ss_pred EEEcCCC-ceEEEEEEEcccCCCCCh
Q psy16426 134 VSKNSLG-DTDGSIKLYGKKKKKKKK 158 (194)
Q Consensus 134 ~a~n~~g-~~~~~~~l~v~~~p~~p~ 158 (194)
.+.+..+ .....+.|.|...+..|.
T Consensus 91 ~v~~~~~~~~~~~~~L~V~~~~~~P~ 116 (121)
T 2edo_A 91 RVLKKTGNEQEWKIKLQVLDPVPKPV 116 (121)
T ss_dssp EEEETTTEEEECCEECEEECCSCCCC
T ss_pred EEEcCCCcEEEEEEEEEEECCCCCCE
Confidence 9987654 345567888877766664
No 448
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=98.59 E-value=1.3e-07 Score=68.61 Aligned_cols=96 Identities=19% Similarity=0.241 Sum_probs=61.2
Q ss_pred ccceeEEeeCCeEEEEEEeecc-------CCCccEEEecCcEE-----ee-----------CCCceeEEecCCceeEEEE
Q psy16426 61 QNQLVGAMEGDQMTLECHSEAY-------PKSINYWTKENGEI-----IA-----------QGSKYEPILLDNAYKIHMK 117 (194)
Q Consensus 61 ~~~~~~~~~g~~~~l~C~~~~~-------p~p~v~W~~~~~~~-----~~-----------~~~~~~~~~~~~~~~~~~~ 117 (194)
.+..+.+.+|+.+.|.|.+.+. +.+.+.|++++... .. ...++. ..........+
T Consensus 6 ~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~--~~~~~~~~~~s 83 (214)
T 2zg1_A 6 VQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFR--LLGDVQKKNCS 83 (214)
T ss_dssp CCSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEE--ECSCGGGTBCC
T ss_pred CCcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceE--EeccCCCCeEE
Confidence 4566778899999999998754 46778999854321 10 011221 11111112348
Q ss_pred EEEeecCCCCCeEEEEEEEcCCCceE----EEEEEEcccCCCCCh
Q psy16426 118 LTIKAVTKQDFGAYKCVSKNSLGDTD----GSIKLYGKKKKKKKK 158 (194)
Q Consensus 118 L~i~~~~~~d~g~y~C~a~n~~g~~~----~~~~l~v~~~p~~p~ 158 (194)
|.|.+++.+|.|.|.|.+.+..+... ..+.|.|...+..|.
T Consensus 84 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~ 128 (214)
T 2zg1_A 84 LSIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPD 128 (214)
T ss_dssp EEECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCE
T ss_pred EEEccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCc
Confidence 99999999999999999998763221 356677766554444
No 449
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=98.59 E-value=2e-07 Score=68.77 Aligned_cols=79 Identities=19% Similarity=0.338 Sum_probs=52.3
Q ss_pred EEeccceeEEeeCCeEEEEEEeeccCCCccEEEecC-c-EE--e------------eCCCceeEEecCCceeEEEEEEEe
Q psy16426 58 IWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKEN-G-EI--I------------AQGSKYEPILLDNAYKIHMKLTIK 121 (194)
Q Consensus 58 i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~-~-~~--~------------~~~~~~~~~~~~~~~~~~~~L~i~ 121 (194)
+...+..+.+.+|+++.|.|. .+.+.+.+.|++++ + .. . ....++...... ....+|.|.
T Consensus 3 v~q~p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~~L~I~ 78 (238)
T 2p1y_A 3 VTQSPRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPS---QENFSLILE 78 (238)
T ss_dssp EEEECSEEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCS---SSBCEEEES
T ss_pred ceECccceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccC---CceEEEEEe
Confidence 344566778899999999999 67788899999842 1 11 0 001222211111 113489999
Q ss_pred ecCCCCCeEEEEEEEcCCC
Q psy16426 122 AVTKQDFGAYKCVSKNSLG 140 (194)
Q Consensus 122 ~~~~~d~g~y~C~a~n~~g 140 (194)
+++.+|.|.|+|.+.|..|
T Consensus 79 ~v~~~DsG~Y~C~~~~~~g 97 (238)
T 2p1y_A 79 LATPSQTSVYFCASGDLGQ 97 (238)
T ss_dssp SCCGGGCEEEEEEEEC---
T ss_pred cCCcccCeeEEEEEEeCCC
Confidence 9999999999999999865
No 450
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=98.59 E-value=3.6e-08 Score=63.09 Aligned_cols=46 Identities=15% Similarity=0.224 Sum_probs=41.1
Q ss_pred ccccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceE
Q psy16426 5 GQNVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEI 50 (194)
Q Consensus 5 ~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l 50 (194)
|+..||.+...+.+..+.+|++++|.|.+.|.|.+.+.|++++..+
T Consensus 1 g~~~~P~~~~~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~ 46 (100)
T 2kdg_A 1 GAMGPPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTV 46 (100)
T ss_dssp CCCEEEECCCCCCCEEEETTCCEEEEEECEEESCCEEEEEETTEEE
T ss_pred CCCCCCeEEeCCCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEEC
Confidence 4677899988888899999999999999999999999999987653
No 451
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=98.59 E-value=3.8e-07 Score=66.50 Aligned_cols=77 Identities=16% Similarity=0.325 Sum_probs=52.1
Q ss_pred cceeEEeeCCeEEEEEEeeccC--CCccEEEecC-cEEee-----------------CCCceeEEecCCceeEEEEEEEe
Q psy16426 62 NQLVGAMEGDQMTLECHSEAYP--KSINYWTKEN-GEIIA-----------------QGSKYEPILLDNAYKIHMKLTIK 121 (194)
Q Consensus 62 ~~~~~~~~g~~~~l~C~~~~~p--~p~v~W~~~~-~~~~~-----------------~~~~~~~~~~~~~~~~~~~L~i~ 121 (194)
+..+.+.+|+++.|.|.+.+.+ .+.+.|++++ +.... ...++...... ....++|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~--~~~~~~L~I~ 84 (219)
T 1c1e_H 7 SGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLET--SATTAYLQIN 84 (219)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEG--GGTEEEEEEC
T ss_pred CCCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEec--CCCEEEEEEC
Confidence 4456688999999999998765 6789999853 22110 01122211100 0114689999
Q ss_pred ecCCCCCeEEEEEEEcCCC
Q psy16426 122 AVTKQDFGAYKCVSKNSLG 140 (194)
Q Consensus 122 ~~~~~d~g~y~C~a~n~~g 140 (194)
+++.+|.|.|+|.+.|..+
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~ 103 (219)
T 1c1e_H 85 NLKNEDMATYFCARGTTIV 103 (219)
T ss_dssp SCCGGGCEEEEEEEEETTT
T ss_pred CCCcccCEEEEEEEeccCc
Confidence 9999999999999999764
No 452
>1oaq_L Light chain; antibody, allergy, IGE, conformational diversity, multispecificity; 1.50A {Rattus rattus} SCOP: b.1.1.1 PDB: 1ocw_L 2bjm_L* 1oau_L* 1oar_L* 1oaz_L 1mfa_L* 1a6v_L* 1oax_L* 1oay_L* 1a6w_L* 1a6u_L 1dl7_L*
Probab=98.58 E-value=3.4e-07 Score=60.85 Aligned_cols=87 Identities=22% Similarity=0.295 Sum_probs=54.6
Q ss_pred eeEEeeCCeEEEEEEeeccC---CCccEEEecCc--E---EeeC--------CCceeEEecCCceeEEEEEEEeecCCCC
Q psy16426 64 LVGAMEGDQMTLECHSEAYP---KSINYWTKENG--E---IIAQ--------GSKYEPILLDNAYKIHMKLTIKAVTKQD 127 (194)
Q Consensus 64 ~~~~~~g~~~~l~C~~~~~p---~p~v~W~~~~~--~---~~~~--------~~~~~~~~~~~~~~~~~~L~i~~~~~~d 127 (194)
.+.+.+|+++.|.|...+.+ ...++||+... . +... ..++..... ....+|.|.+++.+|
T Consensus 9 ~~~~~~G~~v~L~C~~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~----~~~~~L~I~~~~~~D 84 (120)
T 1oaq_L 9 ALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLI----GNKAALTITGAQTED 84 (120)
T ss_dssp EEEECTTCEEEEEEEETTBCCCGGGCCEEEEEETTTEEEEEEETTTEECTTSCTTEEEEEE----TTEEEEEEESCCGGG
T ss_pred cEEEcCCCCEEEEEEeCCCccCCCCEEEEEEeCCCCCCeEEEEEcCccCCCCCCceEEecC----CCeEEEEECCCChhh
Confidence 47788999999999987764 56789997421 1 1110 123322211 114589999999999
Q ss_pred CeEEEEEEEcCCCce-EEEEEEEcccCC
Q psy16426 128 FGAYKCVSKNSLGDT-DGSIKLYGKKKK 154 (194)
Q Consensus 128 ~g~y~C~a~n~~g~~-~~~~~l~v~~~p 154 (194)
.|.|.|.+.+..... .....|.|...+
T Consensus 85 sG~Y~C~~~~~~~~~fg~gt~L~V~~~~ 112 (120)
T 1oaq_L 85 EAIYFCALWYSNHLVFGGGTKLTVLGQP 112 (120)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEECC--
T ss_pred CeEEEEEEccCCCcEECCCEEEEEcCCC
Confidence 999999998763211 122456665443
No 453
>4f9p_D 103.2 anti-BTN3A1 antibody fragment; B7 superfamily, butyrophilin, CD277, immune system; 3.52A {Mus musculus}
Probab=98.58 E-value=4.9e-06 Score=61.74 Aligned_cols=77 Identities=21% Similarity=0.408 Sum_probs=49.9
Q ss_pred EeccceeEEeeCCeEEEEEEeeccCCCccEEEecCc----EEe-eCC--------CceeEEecCCceeEEEEEEEeecCC
Q psy16426 59 WIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENG----EII-AQG--------SKYEPILLDNAYKIHMKLTIKAVTK 125 (194)
Q Consensus 59 ~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~----~~~-~~~--------~~~~~~~~~~~~~~~~~L~i~~~~~ 125 (194)
...+..+.+..|+.+.|.|.+...-...+.||+... +++ ... .+|.... ++ ...+|+|.++..
T Consensus 141 tQsP~slsvs~G~~vtlsC~~S~~~~~~l~WyqQ~PG~~p~lLiy~~s~~~sGvp~RFSgS~-sg---t~ftLtIs~lq~ 216 (254)
T 4f9p_D 141 TQSPVTLSVTPGDSVSLSCRASQSISNNLHWYRQKSHESPRLLIKYASQSIFGIPSRFSGSG-SG---TEFTLSINSVET 216 (254)
T ss_dssp EEECSEEEECTTCEEEEEEEESSCCTTCCEEEEECTTSCCEEEEETTTEECTTSCTTCEEEC-CT---TEEEEEEESCCT
T ss_pred ccCCceeEEcCCCcEeeEEEccCcccCCcEEEEECCCCCCEEEEEeeeecCCCCCCCEEeee-eC---CEEEEEECCCCH
Confidence 445566678899999999987654445688986421 111 111 1332211 11 245899999999
Q ss_pred CCCeEEEEEEEcCC
Q psy16426 126 QDFGAYKCVSKNSL 139 (194)
Q Consensus 126 ~d~g~y~C~a~n~~ 139 (194)
+|.+.|+|...+..
T Consensus 217 eD~A~YYC~q~~~~ 230 (254)
T 4f9p_D 217 EDFGIYFCQQSNSW 230 (254)
T ss_dssp TCCEEEEEEECSSS
T ss_pred HHCEEEEEeecCCC
Confidence 99999999876543
No 454
>2jju_A Signal regulatory protein beta-1; immunoglobulin domain, immunoglobulin superfamily, immune system, transmembrane, paired receptor; 1.19A {Homo sapiens} PDB: 2jjv_A 2uv3_A* 2jjt_A* 2jjs_A* 2jjw_A
Probab=98.57 E-value=1.5e-07 Score=63.27 Aligned_cols=81 Identities=21% Similarity=0.405 Sum_probs=52.5
Q ss_pred EEeccceeEEeeCCeEEEEEEeecc-CCCccEEEecCcE---Eee-CC----CceeEEecCC--ceeEEEEEEEeecCCC
Q psy16426 58 IWIQNQLVGAMEGDQMTLECHSEAY-PKSINYWTKENGE---IIA-QG----SKYEPILLDN--AYKIHMKLTIKAVTKQ 126 (194)
Q Consensus 58 i~~~~~~~~~~~g~~~~l~C~~~~~-p~p~v~W~~~~~~---~~~-~~----~~~~~~~~~~--~~~~~~~L~i~~~~~~ 126 (194)
+...+..+.+.+|+++.|.|.+.+. +.+.+.|+++++. ++. .. .++... .+. ......+|.|.+++.+
T Consensus 6 v~q~p~~~~v~~G~~vtL~C~~~~~~~~~~v~W~r~~~~~~~li~~~~~~~~~r~~~~-~~~~~~~~~~~~L~I~~v~~~ 84 (127)
T 2jju_A 6 VIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTV-SELTKRNNLDFSISISNITPA 84 (127)
T ss_dssp EECCCSEEEEETTSCEEECCEESCCCSCCCEEEEECSSTTCEEEEESSSSCCTTEEEC--------CCBCCEEECSCCGG
T ss_pred EEeeCCeEEEeCCCCEEEEEEEeCCCCCCEEEEEecCCCCcEEEEECCCCccCcEEee-EeeeecCCCEEEEEECCCCHH
Confidence 3444567788999999999998765 4568999984421 111 11 122110 000 0011458999999999
Q ss_pred CCeEEEEEEEcCC
Q psy16426 127 DFGAYKCVSKNSL 139 (194)
Q Consensus 127 d~g~y~C~a~n~~ 139 (194)
|+|.|+|.+.|..
T Consensus 85 DsG~Y~C~~~~~~ 97 (127)
T 2jju_A 85 DAGTYYCVKFRKG 97 (127)
T ss_dssp GCEEEEEEEEECC
T ss_pred HCEEEEEEEEcCC
Confidence 9999999998753
No 455
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=98.57 E-value=7.2e-08 Score=70.05 Aligned_cols=74 Identities=15% Similarity=0.168 Sum_probs=46.6
Q ss_pred eeCCeEEEEEEeeccCC----CccEEEecCcEEeeCCCc-eeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCce
Q psy16426 68 MEGDQMTLECHSEAYPK----SINYWTKENGEIIAQGSK-YEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDT 142 (194)
Q Consensus 68 ~~g~~~~l~C~~~~~p~----p~v~W~~~~~~~~~~~~~-~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~ 142 (194)
..|+++.|.|.+.+.++ +.+.|++ ++........ ......++.+...+.|.|......|.|.|+|.+.|..+..
T Consensus 16 ~~G~~v~L~C~~~g~~p~~~~~~v~W~k-~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g~Y~C~a~n~~~~~ 94 (207)
T 1l6x_A 16 MISRTPEVTCVVVDVSHEDPEVKFNWYV-DGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPA 94 (207)
T ss_dssp CTTSCCEEEEEEEEECSSSCCCEEEEEE-TTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSS
T ss_pred ecCCceEEEEEEecccCCCCCeEEEEEE-CCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCceEEEEEEcCcCCc
Confidence 68999999999988753 3889999 4433322111 1111223333334455554444455999999999988764
No 456
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=98.57 E-value=2.2e-07 Score=70.11 Aligned_cols=94 Identities=20% Similarity=0.302 Sum_probs=60.0
Q ss_pred CCeEEeccceeEEeeCCeEEEEEEeeccC-----CCccEEEecC-cE---Eee---------CCCceeEEecCCceeEEE
Q psy16426 55 PPMIWIQNQLVGAMEGDQMTLECHSEAYP-----KSINYWTKEN-GE---IIA---------QGSKYEPILLDNAYKIHM 116 (194)
Q Consensus 55 ~p~i~~~~~~~~~~~g~~~~l~C~~~~~p-----~p~v~W~~~~-~~---~~~---------~~~~~~~~~~~~~~~~~~ 116 (194)
.+.+...+..+.+.+|+++.|.|.+.+.+ .+.+.|++.+ +. .+. ...++...... ...
T Consensus 15 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~----~~~ 90 (268)
T 1x9q_A 15 DVVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSG----TDF 90 (268)
T ss_dssp CCCEEEECSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEET----TEE
T ss_pred cceEEeeCCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCC----CEE
Confidence 34455556677788999999999998876 4789999743 11 111 11233221111 145
Q ss_pred EEEEeecCCCCCeEEEEEEEcCCCce-EEEEEEEccc
Q psy16426 117 KLTIKAVTKQDFGAYKCVSKNSLGDT-DGSIKLYGKK 152 (194)
Q Consensus 117 ~L~i~~~~~~d~g~y~C~a~n~~g~~-~~~~~l~v~~ 152 (194)
+|.|.+++.+|.|.|+|.+.|..+.. .....|.|..
T Consensus 91 ~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~ 127 (268)
T 1x9q_A 91 TLKINRVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKS 127 (268)
T ss_dssp EEEESSCCGGGCEEEEEEECSSSSCEECCCEEEC---
T ss_pred EEEECCCChhHCEEEEEEEecCCCceEcCCEEEEEcc
Confidence 89999999999999999999875432 1234555544
No 457
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=98.56 E-value=2e-07 Score=67.87 Aligned_cols=81 Identities=11% Similarity=0.084 Sum_probs=54.1
Q ss_pred cceeEEeeC--CeEEEEEEeeccCCCccEEEec--CcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEc
Q psy16426 62 NQLVGAMEG--DQMTLECHSEAYPKSINYWTKE--NGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKN 137 (194)
Q Consensus 62 ~~~~~~~~g--~~~~l~C~~~~~p~p~v~W~~~--~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n 137 (194)
+..+.+.+| +.+.|.|.+.+ |.+.+.|++. ++........+. .... ..|.|.+++.+|.|.|+|.|.|
T Consensus 14 p~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~~~~~--~~~~-----~~l~I~~v~~~D~G~Y~C~a~n 85 (213)
T 2x1w_L 14 HGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRIS--WDSK-----KGFTIPSYMISYAGMVFCEAKI 85 (213)
T ss_dssp CEEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCSSSCE--EETT-----TEEEEEGGGTTTCSEEEEEEC-
T ss_pred ceEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCCCccc--ccCC-----ccEEEccCChhcCceEEEEEEE
Confidence 356778889 99999999876 7788999874 455544432221 1111 2799999999999999999998
Q ss_pred CCCceEEE-EEEEc
Q psy16426 138 SLGDTDGS-IKLYG 150 (194)
Q Consensus 138 ~~g~~~~~-~~l~v 150 (194)
..+...+. +.|.|
T Consensus 86 ~~~~~~s~~~~l~v 99 (213)
T 2x1w_L 86 NDESYQSIMYIVVV 99 (213)
T ss_dssp ---CEECCCEEEEE
T ss_pred CCeeEEEEEEEEEE
Confidence 54443322 55555
No 458
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=98.56 E-value=3.5e-08 Score=72.68 Aligned_cols=82 Identities=16% Similarity=0.347 Sum_probs=45.2
Q ss_pred CCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCc-EE---eeC---------CCceeEEecCCceeEEEEEEEe
Q psy16426 55 PPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENG-EI---IAQ---------GSKYEPILLDNAYKIHMKLTIK 121 (194)
Q Consensus 55 ~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~-~~---~~~---------~~~~~~~~~~~~~~~~~~L~i~ 121 (194)
.+.+...+..+.+.+|+++.|.|.+.+.+.+.+.|++++. .. ... ..++.. .......+|.|.
T Consensus 23 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~----~~~~~~~~L~I~ 98 (233)
T 3bqu_C 23 ETTVTQSPASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSS----SGYGTDFVFTIE 98 (233)
T ss_dssp CCCEEEECSBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCC----CEEEEEEEEC--
T ss_pred ceeEEEcCCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEe----eccCCEEEEEEC
Confidence 3445555666778899999999999988878899997432 11 100 111110 111234589999
Q ss_pred ecCCCCCeEEEEEEEcCCC
Q psy16426 122 AVTKQDFGAYKCVSKNSLG 140 (194)
Q Consensus 122 ~~~~~d~g~y~C~a~n~~g 140 (194)
+++.+|.|.|+|.+.|..+
T Consensus 99 ~v~~~D~G~Y~C~~~~~~~ 117 (233)
T 3bqu_C 99 NMLSEDVADYYCLQSDNLP 117 (233)
T ss_dssp ---CCCCSEEEEEECSSSS
T ss_pred CCCHHHCEEEEEEEecCCc
Confidence 9999999999999998765
No 459
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=98.56 E-value=1.4e-07 Score=70.10 Aligned_cols=89 Identities=11% Similarity=0.198 Sum_probs=56.8
Q ss_pred ceeEEeeCCeEEEEEEeeccC--CCccEEEecCcE--E--e--------------eCCCceeEEecCCceeEEEEEEEee
Q psy16426 63 QLVGAMEGDQMTLECHSEAYP--KSINYWTKENGE--I--I--------------AQGSKYEPILLDNAYKIHMKLTIKA 122 (194)
Q Consensus 63 ~~~~~~~g~~~~l~C~~~~~p--~p~v~W~~~~~~--~--~--------------~~~~~~~~~~~~~~~~~~~~L~i~~ 122 (194)
....+.+|+++.|.|.+.+.| .+.+.|++.+.. . . ....++....... ....+|.|.+
T Consensus 10 ~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~~~~~L~I~~ 87 (247)
T 2ghw_B 10 GGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNS--KNTLYLQMNS 87 (247)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETT--TTEEEEEECS
T ss_pred CCEEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCC--CCEEEEEECc
Confidence 456788999999999999876 578999974311 0 0 0112332111100 1145899999
Q ss_pred cCCCCCeEEEEEEEcCCCce--EEEEEEEcccC
Q psy16426 123 VTKQDFGAYKCVSKNSLGDT--DGSIKLYGKKK 153 (194)
Q Consensus 123 ~~~~d~g~y~C~a~n~~g~~--~~~~~l~v~~~ 153 (194)
++.+|.|.|+|.+.|..+.. .....|.|...
T Consensus 88 v~~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~ 120 (247)
T 2ghw_B 88 LRAEDTAVYYCARDRSYYLDYWGQGTLVTVSSG 120 (247)
T ss_dssp CCGGGCEEEEEEEEETTEEEEECCCEEEEECSC
T ss_pred CCHHHCEEEEEeeeccCCccccCCceEEEEecc
Confidence 99999999999999973221 12345666543
No 460
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.56 E-value=1.6e-07 Score=70.23 Aligned_cols=90 Identities=17% Similarity=0.217 Sum_probs=59.3
Q ss_pred eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEee-CCCceeEEecCCceeEEEEEEEeecCCCCCeEEE
Q psy16426 54 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIA-QGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYK 132 (194)
Q Consensus 54 ~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~-~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~ 132 (194)
.+|.|...+.. .+.+|+++.|.|.+.+ +.+.+.|++ ++.... ..... .. ......|.|.+++.+|.|.|+
T Consensus 6 ~kP~i~~~P~~-~v~~G~~VtL~C~~~~-~~~~~~w~k-~g~~~~~~~~~~---~~---~~~~~~L~I~~v~~~DsG~Y~ 76 (242)
T 1p6f_A 6 PKPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHF-EGSLFAVDRPKP---PE---RINKVKFYIPDMNSRMAGQYS 76 (242)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEE-TTEEEEEECCSS---CT---TCCEEEEEECSCCGGGCEEEE
T ss_pred CCCEEEeeCCC-ccCCCCcEEEEEeeCC-CCcEEEEEE-CCCccccccccc---cC---CcceeEEEecCCCcccCeEEE
Confidence 35777766655 6889999999999865 346788998 444332 11000 00 112458999999999999999
Q ss_pred EEEEcCCCce--EEEEEEEccc
Q psy16426 133 CVSKNSLGDT--DGSIKLYGKK 152 (194)
Q Consensus 133 C~a~n~~g~~--~~~~~l~v~~ 152 (194)
|.+.|..+.. ...+.|.|..
T Consensus 77 C~~~~~~~~s~~S~~~~L~V~~ 98 (242)
T 1p6f_A 77 CIYRVGELWSEPSNLLDLVVTE 98 (242)
T ss_dssp EEEEETTEECCCCCCEEEEEEC
T ss_pred EEEecCCccccCCcceEEEeec
Confidence 9998764322 3345565554
No 461
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=98.56 E-value=2.8e-07 Score=65.96 Aligned_cols=88 Identities=20% Similarity=0.227 Sum_probs=60.1
Q ss_pred ceeEEeeCCeEEEEEEeec--cCCCccEEEe--cCcEEee---------CCCceeEEecCCceeEEEEEEEeecCCCCCe
Q psy16426 63 QLVGAMEGDQMTLECHSEA--YPKSINYWTK--ENGEIIA---------QGSKYEPILLDNAYKIHMKLTIKAVTKQDFG 129 (194)
Q Consensus 63 ~~~~~~~g~~~~l~C~~~~--~p~p~v~W~~--~~~~~~~---------~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g 129 (194)
..+....|+++.|.|.... .+.+.+.|++ ++..+.. ...++. ...+ ++|.|.+++.+|.|
T Consensus 7 ~~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~--~~~n-----gsL~I~~v~~~DsG 79 (182)
T 1hnf_A 7 LETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYK--LFKN-----GTLKIKHLKTDDQD 79 (182)
T ss_dssp EEEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEE--ECTT-----SCEEECSCCGGGCE
T ss_pred cEEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEE--ECCC-----CCEEECCCChhhCE
Confidence 4566788999999995422 3456889998 5554421 222332 1222 38999999999999
Q ss_pred EEEEEEEcCCCceE--EEEEEEcccCCCCC
Q psy16426 130 AYKCVSKNSLGDTD--GSIKLYGKKKKKKK 157 (194)
Q Consensus 130 ~y~C~a~n~~g~~~--~~~~l~v~~~p~~p 157 (194)
.|+|.+.|..|... ..+.|.|......|
T Consensus 80 ~Y~c~~~n~~g~~~~~~~~~L~V~~~~~~P 109 (182)
T 1hnf_A 80 IYKVSIYDTKGKNVLEKIFDLKIQERVSKP 109 (182)
T ss_dssp EEEEEEEETTSCEEEEEEEEEEEECCCCCC
T ss_pred EEEEEEEeCCCceeEEEEEEEEEcCcCCCC
Confidence 99999999988754 45667776544434
No 462
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=98.55 E-value=5.9e-07 Score=66.61 Aligned_cols=76 Identities=18% Similarity=0.257 Sum_probs=51.9
Q ss_pred EEeccceeEEeeCCeEEEEEEeeccCCCccEEEecC-------------cE-EeeCC---CceeEEecCCceeEEEEEEE
Q psy16426 58 IWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKEN-------------GE-IIAQG---SKYEPILLDNAYKIHMKLTI 120 (194)
Q Consensus 58 i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~-------------~~-~~~~~---~~~~~~~~~~~~~~~~~L~i 120 (194)
+...+..+.+.+|+++.|.| ..+.+.+.+.|++.. +. ..... .++.... +. ....+|.|
T Consensus 5 v~~~p~~v~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~--~~~~sL~I 80 (245)
T 4ei6_B 5 VLQIPSHQIIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVER-PD--GSYFTLKI 80 (245)
T ss_dssp CEEECSEEEEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEEC-CT--TSCEEEEE
T ss_pred eEeCCceEEecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEe-cc--CceEEEEE
Confidence 44556677889999999999 667778889998721 11 11111 2333221 11 12468999
Q ss_pred eecCCCCCeEEEEEEEc
Q psy16426 121 KAVTKQDFGAYKCVSKN 137 (194)
Q Consensus 121 ~~~~~~d~g~y~C~a~n 137 (194)
.+++.+|.|.|+|.+.+
T Consensus 81 ~~v~~~D~G~Y~C~~~~ 97 (245)
T 4ei6_B 81 QPTALEDSAVYFCASSF 97 (245)
T ss_dssp CSCCGGGCEEEEEEEEC
T ss_pred CCCCHhHCEEEEEEEcc
Confidence 99999999999999995
No 463
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=98.55 E-value=6.7e-07 Score=65.69 Aligned_cols=77 Identities=16% Similarity=0.268 Sum_probs=52.3
Q ss_pred cceeEEeeCCeEEEEEEeeccC--CCccEEEecC-cE-E--e-e-------------CCCceeEEecCCceeEEEEEEEe
Q psy16426 62 NQLVGAMEGDQMTLECHSEAYP--KSINYWTKEN-GE-I--I-A-------------QGSKYEPILLDNAYKIHMKLTIK 121 (194)
Q Consensus 62 ~~~~~~~~g~~~~l~C~~~~~p--~p~v~W~~~~-~~-~--~-~-------------~~~~~~~~~~~~~~~~~~~L~i~ 121 (194)
+..+.+.+|+++.|.|.+.+.+ .+.+.|++.+ +. . + . ...++...... .....+|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~--~~~~~sL~I~ 84 (225)
T 1op3_H 7 SGGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDD--LEDFVYLQMH 84 (225)
T ss_dssp ECCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEET--TTTEEEEEEC
T ss_pred CCCeEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecC--CCCEEEEEEC
Confidence 3456788999999999998766 6789999743 11 1 1 0 01223211110 0114689999
Q ss_pred ecCCCCCeEEEEEEEcCCC
Q psy16426 122 AVTKQDFGAYKCVSKNSLG 140 (194)
Q Consensus 122 ~~~~~d~g~y~C~a~n~~g 140 (194)
+++.+|.|.|+|.+.|..|
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~ 103 (225)
T 1op3_H 85 KMRVEDTAIYYCARKGSDR 103 (225)
T ss_dssp SCCGGGCEEEEEEEECCSS
T ss_pred CCChhhCEEEEEEEecCCC
Confidence 9999999999999999764
No 464
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=98.55 E-value=9.1e-08 Score=61.01 Aligned_cols=45 Identities=16% Similarity=0.360 Sum_probs=40.0
Q ss_pred cccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceE
Q psy16426 6 QNVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEI 50 (194)
Q Consensus 6 v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l 50 (194)
...||.+...+.+..+.+|++++|.|.+.|.|.+.+.|++++..+
T Consensus 2 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~ 46 (99)
T 1u2h_A 2 SKAPPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPV 46 (99)
T ss_dssp -CEEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEEC
T ss_pred CCCCCEEEEcCCceEecCCCEEEEEEEEEEcCCCEEEEEECCEEC
Confidence 457899999999999999999999999999999999999987653
No 465
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=98.55 E-value=4e-08 Score=73.76 Aligned_cols=94 Identities=15% Similarity=0.244 Sum_probs=57.5
Q ss_pred CeEEeccceeEEeeCCeEEEEEEee---ccCCCccEEEecCcEEeeC-----------------CCceeEEecCCceeEE
Q psy16426 56 PMIWIQNQLVGAMEGDQMTLECHSE---AYPKSINYWTKENGEIIAQ-----------------GSKYEPILLDNAYKIH 115 (194)
Q Consensus 56 p~i~~~~~~~~~~~g~~~~l~C~~~---~~p~p~v~W~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~ 115 (194)
+.+...+..+.+.+|+.+.|.|.+. +.+.+.+.|++.+...... ..+.. .........
T Consensus 6 ~~v~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~--~~~~~~~~~ 83 (268)
T 3mj6_A 6 PGLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSH--LVGDTFHND 83 (268)
T ss_dssp ------CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEE--ECSCTTTTB
T ss_pred cccccCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceE--EeecCCCCE
Confidence 3445566677889999999999987 5667789999844321000 01111 000000112
Q ss_pred EEEEEeecCCCCCeEEEEEEEcCCCce--EEEEEEEcc
Q psy16426 116 MKLTIKAVTKQDFGAYKCVSKNSLGDT--DGSIKLYGK 151 (194)
Q Consensus 116 ~~L~i~~~~~~d~g~y~C~a~n~~g~~--~~~~~l~v~ 151 (194)
.+|.|.+++.+|.|.|+|.+.|..+.. ...+.|.|.
T Consensus 84 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~ 121 (268)
T 3mj6_A 84 GSLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVL 121 (268)
T ss_dssp CCEEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEE
T ss_pred EEEEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEe
Confidence 589999999999999999999876554 344555554
No 466
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=98.55 E-value=5.2e-07 Score=67.67 Aligned_cols=76 Identities=17% Similarity=0.257 Sum_probs=51.8
Q ss_pred ceeEEeeCCeEEEEEEeeccC--CCccEEEecC-c---EEe-e------------CCCceeEEecCCceeEEEEEEEeec
Q psy16426 63 QLVGAMEGDQMTLECHSEAYP--KSINYWTKEN-G---EII-A------------QGSKYEPILLDNAYKIHMKLTIKAV 123 (194)
Q Consensus 63 ~~~~~~~g~~~~l~C~~~~~p--~p~v~W~~~~-~---~~~-~------------~~~~~~~~~~~~~~~~~~~L~i~~~ 123 (194)
....+.+|+++.|.|.+.+.| .+.+.|++++ + ..+ . ...++...... .....+|.|.++
T Consensus 8 ~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~--~~~~~~L~I~~v 85 (257)
T 1f3r_B 8 GPGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDT--SKNQVFLKMNSL 85 (257)
T ss_dssp CCSEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEET--TTTEEEEEEESC
T ss_pred CCccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEEC--CCCEEEEEECCC
Confidence 445688999999999998875 6889999842 1 111 0 01223211110 011458999999
Q ss_pred CCCCCeEEEEEEEcCCC
Q psy16426 124 TKQDFGAYKCVSKNSLG 140 (194)
Q Consensus 124 ~~~d~g~y~C~a~n~~g 140 (194)
+.+|.|.|+|.+.|..|
T Consensus 86 ~~~DsG~Y~C~a~n~~g 102 (257)
T 1f3r_B 86 QTDDTGTYYCTRDLYGG 102 (257)
T ss_dssp CTTCCEEEEEEEESSSS
T ss_pred CcccCEEEEEEEccccc
Confidence 99999999999999854
No 467
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=98.55 E-value=6.5e-08 Score=63.85 Aligned_cols=47 Identities=23% Similarity=0.437 Sum_probs=42.0
Q ss_pred cccccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceE
Q psy16426 4 QGQNVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEI 50 (194)
Q Consensus 4 ~~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l 50 (194)
..+..||.+...+.+..+.+|++++|.|.+.|.|.|.+.|++++..+
T Consensus 4 ~~~~~pP~i~~~p~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~~~~~ 50 (117)
T 2v9t_A 4 RQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERV 50 (117)
T ss_dssp CCCCEEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEEC
T ss_pred ccccCCCeeEcCCCCEEEcCCCcEEEEEECCccCCCeEEEEECCEec
Confidence 34678999999999999999999999999999999999999987653
No 468
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=98.55 E-value=1.3e-07 Score=68.51 Aligned_cols=82 Identities=20% Similarity=0.276 Sum_probs=53.2
Q ss_pred ceeEEeeCCeEEEEEEeeccCCCc---cEEEecCcEEeeC---C------------CceeEE---ecCCceeEEEEEEEe
Q psy16426 63 QLVGAMEGDQMTLECHSEAYPKSI---NYWTKENGEIIAQ---G------------SKYEPI---LLDNAYKIHMKLTIK 121 (194)
Q Consensus 63 ~~~~~~~g~~~~l~C~~~~~p~p~---v~W~~~~~~~~~~---~------------~~~~~~---~~~~~~~~~~~L~i~ 121 (194)
..+.+..|+++.|.|.+.+.+.+. +.|+++++..... . .+.... .........++|.|.
T Consensus 9 ~~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~ 88 (225)
T 4fmk_A 9 PEVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFR 88 (225)
T ss_dssp SEEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEEC
T ss_pred CEEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEc
Confidence 345678899999999998877654 6799865443210 0 000000 000001123579999
Q ss_pred ecCCCCCeEEEEEEEcCCCceEE
Q psy16426 122 AVTKQDFGAYKCVSKNSLGDTDG 144 (194)
Q Consensus 122 ~~~~~d~g~y~C~a~n~~g~~~~ 144 (194)
+++.+|.|.|+|.+.|..+....
T Consensus 89 ~v~~~D~G~Y~C~~~~~~~~~~~ 111 (225)
T 4fmk_A 89 GLRVEDEGNYTCEFATFPNGTRR 111 (225)
T ss_dssp SCCGGGCEEEEEEEEEETTEEEE
T ss_pred cCCHHHCcceEEEEEeCCCccee
Confidence 99999999999999988775544
No 469
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.55 E-value=2.2e-07 Score=70.23 Aligned_cols=95 Identities=11% Similarity=0.072 Sum_probs=59.7
Q ss_pred eCCeEEeccceeEEeeCCeEEEEEEeeccCCCccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEE
Q psy16426 54 VPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKC 133 (194)
Q Consensus 54 ~~p~i~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C 133 (194)
.+|.|...+. ..+.+|+++.|.|.+.+ +.+.+.|++++..+.... . ............|.|.+++.+|.|.|+|
T Consensus 6 ~kP~i~~~P~-~~V~~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~-~---~~~~~~~~~~~~L~I~~v~~~DsG~Y~C 79 (257)
T 1b6u_A 6 RKPSLLAHPG-PLVKSEETVILQCWSDV-RFQHFLLHREGKFKDTLH-L---IGEHHDGVSKANFSIGPMMQDLAGTYRC 79 (257)
T ss_dssp CCCEECCBSC-SEEESSCCEEEEEEESS-CCSEEEEEEESTTCEEEE-E---ECBCCTTCEEEEEEECSCCTTTCEEEEE
T ss_pred CCCEEEEcCC-CEecCCCCEEEEEecCC-CCcEEEEEECCCCCCcce-e---eeeccCCCceEEEEeecCCcccCEEEEE
Confidence 3566665554 55789999999999874 467788998543222110 0 0000001224689999999999999999
Q ss_pred EEEcCCC-----ceEEEEEEEcccCC
Q psy16426 134 VSKNSLG-----DTDGSIKLYGKKKK 154 (194)
Q Consensus 134 ~a~n~~g-----~~~~~~~l~v~~~p 154 (194)
.+.|..+ .....+.|.|...+
T Consensus 80 ~a~~~~~~~~~s~~S~~~~L~V~~~~ 105 (257)
T 1b6u_A 80 YGSVTHSPYQLSAPSDPLDIVITGLY 105 (257)
T ss_dssp EEECSSCTTSCCCCCCCEEEEEECSS
T ss_pred eEeccCCCccccccCCCEEEecccCC
Confidence 9986432 12334556555443
No 470
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=98.54 E-value=2.2e-07 Score=66.30 Aligned_cols=89 Identities=22% Similarity=0.223 Sum_probs=60.3
Q ss_pred ceeEEeeCCeEEEEEEeec-cCCCccEEEec-CcEEeeCC-------------CceeEEecCCceeEEEEEEEeecCCCC
Q psy16426 63 QLVGAMEGDQMTLECHSEA-YPKSINYWTKE-NGEIIAQG-------------SKYEPILLDNAYKIHMKLTIKAVTKQD 127 (194)
Q Consensus 63 ~~~~~~~g~~~~l~C~~~~-~p~p~v~W~~~-~~~~~~~~-------------~~~~~~~~~~~~~~~~~L~i~~~~~~d 127 (194)
..+.+.+|+++.|.|.+.+ .+.+.+.|++. +..+.... .++. + + ....+|.|.+++.+|
T Consensus 7 ~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~--l-~---~~~~sL~I~~v~~~D 80 (180)
T 2dru_A 7 PNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVD--L-D---KTNGALRIYNVSKED 80 (180)
T ss_dssp CEEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEE--E-C---TTTCCEEECSCCGGG
T ss_pred ceEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEE--E-e---CCCccEEEcCCCHHH
Confidence 4567889999999998744 33678999983 22222100 1111 1 0 113489999999999
Q ss_pred CeEEEEEEEcCCCceEEEEEEEcccCCCCCh
Q psy16426 128 FGAYKCVSKNSLGDTDGSIKLYGKKKKKKKK 158 (194)
Q Consensus 128 ~g~y~C~a~n~~g~~~~~~~l~v~~~p~~p~ 158 (194)
.|.|+|.+.+.. .....+.|.|..++..|.
T Consensus 81 ~G~Y~C~v~~~~-~~~~~~~L~V~~~~~~P~ 110 (180)
T 2dru_A 81 RGDYYMRMLHET-EDQWKITMEVYEMVSKPM 110 (180)
T ss_dssp CEEEEEEEESSS-EEEEEEEEEEECCCCCCE
T ss_pred CeEEEEEEEcCC-eEEEEEEEEEECCCCCCE
Confidence 999999998876 556677888876655554
No 471
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.54 E-value=1.7e-07 Score=68.91 Aligned_cols=75 Identities=15% Similarity=0.270 Sum_probs=51.7
Q ss_pred cceeEEeeCCeEEEEEEeeccCC-C-ccEEEecCc-EE---ee---------CCCceeEEecCCceeEEEEEEEeecCCC
Q psy16426 62 NQLVGAMEGDQMTLECHSEAYPK-S-INYWTKENG-EI---IA---------QGSKYEPILLDNAYKIHMKLTIKAVTKQ 126 (194)
Q Consensus 62 ~~~~~~~~g~~~~l~C~~~~~p~-p-~v~W~~~~~-~~---~~---------~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 126 (194)
+..+.+.+|+++.|.|.+.+.+. + .+.|++++. .. .. ...++..... ....+|.|.+++.+
T Consensus 26 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~----~~~~~L~I~~v~~~ 101 (234)
T 2j6e_L 26 PPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKS----GTSASLAISGLRSE 101 (234)
T ss_dssp CSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEE----TTEEEEEEESCCST
T ss_pred CCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEec----CCeEEEEECCCCHH
Confidence 45566789999999999987543 4 699998532 11 10 0122221111 12458999999999
Q ss_pred CCeEEEEEEEcCCC
Q psy16426 127 DFGAYKCVSKNSLG 140 (194)
Q Consensus 127 d~g~y~C~a~n~~g 140 (194)
|.|.|+|.+.|..+
T Consensus 102 D~G~Y~C~~~~~~~ 115 (234)
T 2j6e_L 102 DEADYYCATWDDSL 115 (234)
T ss_dssp TCSEEEEEEEETTT
T ss_pred HCEEEEEEEEcCCc
Confidence 99999999999877
No 472
>3bik_B Programmed cell death protein 1; CO-stimulation, receptor-ligand complex, immunoglobulin-like sandwich, T cell, B cell, programmed death; 2.65A {Mus musculus} SCOP: b.1.1.1
Probab=98.54 E-value=5.2e-07 Score=61.32 Aligned_cols=98 Identities=14% Similarity=0.242 Sum_probs=60.5
Q ss_pred EEeccceeEEeeCCeEEEEEEeeccC-CCccEEEecCc-E----Eee---------CCCceeEEecCCceeEEEEEEEee
Q psy16426 58 IWIQNQLVGAMEGDQMTLECHSEAYP-KSINYWTKENG-E----IIA---------QGSKYEPILLDNAYKIHMKLTIKA 122 (194)
Q Consensus 58 i~~~~~~~~~~~g~~~~l~C~~~~~p-~p~v~W~~~~~-~----~~~---------~~~~~~~~~~~~~~~~~~~L~i~~ 122 (194)
+...+..+.+.+|+.+.|.|...... ...++||+... . ++. ...++.... +. .....+|.|.+
T Consensus 12 v~Q~p~~v~v~~G~~vtL~C~~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~-~~-~~~~~~L~I~~ 89 (134)
T 3bik_B 12 LTFYPAWLTVSEGANATFTCSLSNWSEDLMLNWNRLSPSNQTEKQAAFSNGLSQPVQDARFQIIQ-LP-NRHDFHMNILD 89 (134)
T ss_dssp EEEECSEEEEETTSCEEEEEEESSCCTTCEEEEEEECTTCCEEEEEEEETTEEEESSCTTEEEEE-CT-TSSEEEEEECS
T ss_pred EEECCCeEEEeCCCCEEEEEEeCCCCCCcEEEEEEcCCCCCceEEEEEcCCCCCcccCCCEEEEe-cC-CCCEEEEEECC
Confidence 34456677789999999999987543 46789997421 1 110 122333211 10 11246899999
Q ss_pred cCCCCCeEEEEEEEcCCCce----EEEEEEEcccCCCCC
Q psy16426 123 VTKQDFGAYKCVSKNSLGDT----DGSIKLYGKKKKKKK 157 (194)
Q Consensus 123 ~~~~d~g~y~C~a~n~~g~~----~~~~~l~v~~~p~~p 157 (194)
++.+|+|.|.|.+.+..... .....|.|.+.+..+
T Consensus 90 ~~~~Dsg~Y~C~~~~~~~~~~~~~~~gt~L~V~~~~~~~ 128 (134)
T 3bik_B 90 TRRNDSGIYLCGAISLHPKAKIEESPGAELVVTERILET 128 (134)
T ss_dssp CCGGGCEEEEEEEEECSSSCEEEECCCEEEEEECCC---
T ss_pred CChHHCEEEEEEEEeCCCCceEEEcCCEEEEEeCCCCCC
Confidence 99999999999998764321 224567776654433
No 473
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=98.54 E-value=2.8e-07 Score=68.85 Aligned_cols=89 Identities=15% Similarity=0.271 Sum_probs=56.9
Q ss_pred cceeEEeeCCeEEEEEEeecc--CCCccEEEecCc----EEee---------CCCceeEEecCCceeEEEEEEEeecCCC
Q psy16426 62 NQLVGAMEGDQMTLECHSEAY--PKSINYWTKENG----EIIA---------QGSKYEPILLDNAYKIHMKLTIKAVTKQ 126 (194)
Q Consensus 62 ~~~~~~~~g~~~~l~C~~~~~--p~p~v~W~~~~~----~~~~---------~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 126 (194)
+..+.+.+|+++.|.|.+.+. +.+.++|++.+. ..+. ...++...... ...+|.|.+++.+
T Consensus 9 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~----~~~~L~I~~v~~~ 84 (256)
T 3ux9_B 9 PPSVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSG----TSASLAITGLQSE 84 (256)
T ss_dssp CSEEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEET----TEEEEEECSCCGG
T ss_pred CCcEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccC----CEEEEEECCCChh
Confidence 345678899999999999876 678899997421 1110 11223211111 1458999999999
Q ss_pred CCeEEEEEEEcCCCce---EEEEEEEcccCC
Q psy16426 127 DFGAYKCVSKNSLGDT---DGSIKLYGKKKK 154 (194)
Q Consensus 127 d~g~y~C~a~n~~g~~---~~~~~l~v~~~p 154 (194)
|.|.|+|.+.|..+.. .....|.|...+
T Consensus 85 DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~ 115 (256)
T 3ux9_B 85 DEADYYCQVRDNNENEWVFGGGTKLTVLGSG 115 (256)
T ss_dssp GCEEEEEEEEETTTTEEEECCCEEEEEC---
T ss_pred hCEEEEEEEEECCCCceEECCCEEEEEECCC
Confidence 9999999999865432 123456665443
No 474
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=98.54 E-value=1.2e-07 Score=61.02 Aligned_cols=45 Identities=13% Similarity=0.149 Sum_probs=41.1
Q ss_pred ccccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCce
Q psy16426 5 GQNVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGE 49 (194)
Q Consensus 5 ~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~ 49 (194)
.+..+|.+...+.+..+.+|++++|.|.+.|.|.+.+.|++++..
T Consensus 4 ~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~ 48 (103)
T 3qp3_A 4 TLDHAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVE 48 (103)
T ss_dssp TTCEEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEE
T ss_pred CCCCCCEEEeCCcceEEeCCCeEEEEEEEEecCCCEEEEEECCEE
Confidence 456789999999999999999999999999999999999998765
No 475
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=98.54 E-value=3.1e-07 Score=67.13 Aligned_cols=77 Identities=12% Similarity=0.252 Sum_probs=51.4
Q ss_pred cceeEEeeCCeEEEEEEeeccC--CCccEEEecC-cE---Ee-e---------------CCCceeEEecCCceeEEEEEE
Q psy16426 62 NQLVGAMEGDQMTLECHSEAYP--KSINYWTKEN-GE---II-A---------------QGSKYEPILLDNAYKIHMKLT 119 (194)
Q Consensus 62 ~~~~~~~~g~~~~l~C~~~~~p--~p~v~W~~~~-~~---~~-~---------------~~~~~~~~~~~~~~~~~~~L~ 119 (194)
+..+.+.+|+++.|.|.+.+.+ .+.+.|++.+ +. .+ . ...++....... ....+|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~--~~~~~L~ 84 (222)
T 1q9r_B 7 SGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNS--QSILYLQ 84 (222)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETT--TTEEEEE
T ss_pred CCceeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECC--CCeEEEE
Confidence 3456678999999999998765 6789999743 11 01 0 011222111100 1145899
Q ss_pred EeecCCCCCeEEEEEEEcCCC
Q psy16426 120 IKAVTKQDFGAYKCVSKNSLG 140 (194)
Q Consensus 120 i~~~~~~d~g~y~C~a~n~~g 140 (194)
|.+++.+|.|.|.|.+.|..+
T Consensus 85 I~~v~~~D~G~Y~C~~~~~~~ 105 (222)
T 1q9r_B 85 MNTLRAEDSATYYCARDHDGY 105 (222)
T ss_dssp ECSCCGGGCEEEEEEECCCSS
T ss_pred ECcCCcccCeEEEEEEeccCC
Confidence 999999999999999998654
No 476
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=98.53 E-value=1.5e-06 Score=69.50 Aligned_cols=79 Identities=15% Similarity=0.194 Sum_probs=46.4
Q ss_pred eCC-eEEEEEEeeccC-C--CccEEE-ecC--cEEeeCCCc----eeEEecCCceeEEEEEEEeecCC-CCCeEEEEEEE
Q psy16426 69 EGD-QMTLECHSEAYP-K--SINYWT-KEN--GEIIAQGSK----YEPILLDNAYKIHMKLTIKAVTK-QDFGAYKCVSK 136 (194)
Q Consensus 69 ~g~-~~~l~C~~~~~p-~--p~v~W~-~~~--~~~~~~~~~----~~~~~~~~~~~~~~~L~i~~~~~-~d~g~y~C~a~ 136 (194)
.|+ .+.|.|.+.+.. . +.+.|. +++ +........ ......++.|...+.|.+..... .+.+.|+|.+.
T Consensus 306 ~G~~~vtL~C~a~GfyP~~~~~VtW~~rdg~~g~~~~~~~~~~~s~~~~~~DGTysvsS~L~V~~~~~e~~g~~YTC~V~ 385 (401)
T 3f8u_B 306 PGEAPPELLCLVSHFYPSGGLEVEWELRGGPGGRSQKAEGQRWLSALRHHSDGSVSLSGHLQPPPVTTEQHGARYACRIH 385 (401)
T ss_dssp TTCCCCCEEEEEEEEBSSTTCEEEEEEESSSSCSCEECCSEEEECCCEECTTSCEEEEEEEECCCCCGGGTTCEEEEEEE
T ss_pred CCCccEEEEEEecCCcCCCCcEEEEEecCCCCCceecccccccccccccCCCceEEEEEEEEEccCccccCCCEEEEEEE
Confidence 465 789999999864 3 578895 632 111111110 01123455566777787776542 34459999999
Q ss_pred cCC---CceEEEEE
Q psy16426 137 NSL---GDTDGSIK 147 (194)
Q Consensus 137 n~~---g~~~~~~~ 147 (194)
+.. +.....+.
T Consensus 386 H~sL~~g~rs~sVt 399 (401)
T 3f8u_B 386 HPSLPASGRSAEVT 399 (401)
T ss_dssp CTTSCTTCEEEEEE
T ss_pred cCCCCCCcceEEEE
Confidence 875 44444443
No 477
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=98.53 E-value=6.5e-08 Score=71.69 Aligned_cols=94 Identities=12% Similarity=0.111 Sum_probs=60.9
Q ss_pred CCeEE-eccceeEEeeCCeEEEEEEeecc-CC-C-ccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeE
Q psy16426 55 PPMIW-IQNQLVGAMEGDQMTLECHSEAY-PK-S-INYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGA 130 (194)
Q Consensus 55 ~p~i~-~~~~~~~~~~g~~~~l~C~~~~~-p~-p-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~ 130 (194)
+|.+. ..+....+..|+.+.|.|.+.+. |. | .+.|++++..+............++.+...+.|.|.++..+|.|.
T Consensus 12 ~P~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D~g~ 91 (231)
T 2w59_A 12 PIQLYAIPPSPGELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSGER 91 (231)
T ss_dssp CCEEEEECCCHHHHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCC
T ss_pred CCEEEEeCcChhhcccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhccCCCE
Confidence 44443 34444556789999999999885 53 4 899998443331222111112234445566789999999999999
Q ss_pred EEEEEEcCCCceEEEEEE
Q psy16426 131 YKCVSKNSLGDTDGSIKL 148 (194)
Q Consensus 131 y~C~a~n~~g~~~~~~~l 148 (194)
|+|.+.|..+.....+.+
T Consensus 92 Y~C~~~~~~~~~~~~~~v 109 (231)
T 2w59_A 92 FTCTVQHEELPLPLSKSV 109 (231)
T ss_dssp EEEEEECTTCSSCEEEEE
T ss_pred EEEEEEcCCCCCceEEEE
Confidence 999999987654333333
No 478
>1tvd_A T cell receptor, ES204 V delta; immunoreceptor, TCR, delta chain, variable domain; 1.90A {Homo sapiens} SCOP: b.1.1.1
Probab=98.53 E-value=4.4e-07 Score=59.84 Aligned_cols=78 Identities=13% Similarity=0.205 Sum_probs=51.7
Q ss_pred EeccceeEEeeCCeEEEEEEeecc-CCCccEEEecCc--E---EeeC-----------CCceeEEecCCceeEEEEEEEe
Q psy16426 59 WIQNQLVGAMEGDQMTLECHSEAY-PKSINYWTKENG--E---IIAQ-----------GSKYEPILLDNAYKIHMKLTIK 121 (194)
Q Consensus 59 ~~~~~~~~~~~g~~~~l~C~~~~~-p~p~v~W~~~~~--~---~~~~-----------~~~~~~~~~~~~~~~~~~L~i~ 121 (194)
...+..+.+.+|+++.|.|.+... +...++|++... . +... ..++.... + ......+|+|.
T Consensus 4 ~q~p~~~~~~~G~~vtL~C~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~-~-~~~~~~~L~I~ 81 (116)
T 1tvd_A 4 TQSSPDQTVASGSEVVLLCTYDTVYSNPDLFWYRIRPDYSFQFVFYGDDSRSEGADFTQGRFSVKH-I-LTQKAFHLVIS 81 (116)
T ss_dssp ECCSCCEEEETTCCEEECCEEECCSSSCCEEEEEECTTSCEEEEEEECSSCEEECGGGTTTEEEEE-E-GGGTEEEEEES
T ss_pred ecCCCcEEEecCCeEEEEeEeEcCCCCcEEEEEEeCCCCCcEEEEEECCcccccCcccCCCEEEEE-e-cCCCEEEEEEc
Confidence 345566778999999999998754 456789997431 1 1110 12232111 0 01124589999
Q ss_pred ecCCCCCeEEEEEEEcC
Q psy16426 122 AVTKQDFGAYKCVSKNS 138 (194)
Q Consensus 122 ~~~~~d~g~y~C~a~n~ 138 (194)
+++.+|+|.|.|.+.+.
T Consensus 82 ~~~~~DsG~Y~C~~~~~ 98 (116)
T 1tvd_A 82 PVRTEDSATYYCAFTLP 98 (116)
T ss_dssp SCCGGGCEEEEEEEECT
T ss_pred cCChHHCEEEEEEEeCC
Confidence 99999999999999884
No 479
>2aw2_A B and T lymphocyte attenuator; IGI domain, IGG domain, TNFRSF, protein-protein complex, IMM system; HET: NAG FUL; 2.80A {Homo sapiens} SCOP: b.1.1.1
Probab=98.53 E-value=6.3e-07 Score=57.36 Aligned_cols=87 Identities=21% Similarity=0.304 Sum_probs=58.8
Q ss_pred ceeEEeeCCeEEEEEEeec-cCCCccEEEecCcEEee-CCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCC
Q psy16426 63 QLVGAMEGDQMTLECHSEA-YPKSINYWTKENGEIIA-QGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLG 140 (194)
Q Consensus 63 ~~~~~~~g~~~~l~C~~~~-~p~p~v~W~~~~~~~~~-~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g 140 (194)
+...+..|+.+.|.|.+.+ .+-|.++|.+.++.... ...........+. -....|.|.++..+|.|.|+|.|.+..|
T Consensus 19 S~hsv~~G~~f~leCpv~yc~~rP~VtWcKln~~~c~~L~~~~q~w~E~~N-~s~fvLhf~~V~~sDsGsYRCsAn~~sg 97 (120)
T 2aw2_A 19 SEHSILAGDPFELECPVKYCANRPHVTWCKLNGTTCVKLEDRQTSWKEEKN-ISFFILHFEPVLPNDNGSYRCSANFQSN 97 (120)
T ss_dssp EEEEEETTSCEEEEEEEECSSSCCEEEEEEECSSCEEECCSSCEEEEECSS-CEEEEEEESSCCGGGCEEEEEEEEETTE
T ss_pred ccceEecCCeEEEEccEEeccCCCceEEEecCCceEEECccccccceecCC-eeEEEEEEeeeeEcCCcceEEEeeCCCC
Confidence 4456788999999999988 57899999987753221 1111111111111 1134899999999999999999999888
Q ss_pred ceEE-EEEEEc
Q psy16426 141 DTDG-SIKLYG 150 (194)
Q Consensus 141 ~~~~-~~~l~v 150 (194)
...+ .+.+.|
T Consensus 98 ~ieSHsvtI~V 108 (120)
T 2aw2_A 98 LIESHSTTLYV 108 (120)
T ss_dssp EEECCCEEEEE
T ss_pred cEEeeEEEEEE
Confidence 7654 344443
No 480
>3bp6_A Programmed cell death protein 1; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3rnk_A 3sbw_A 3bp5_A 1npu_A 3rnq_A
Probab=98.53 E-value=1.5e-06 Score=57.49 Aligned_cols=92 Identities=15% Similarity=0.246 Sum_probs=57.9
Q ss_pred EeccceeEEeeCCeEEEEEEeeccC-CCccEEEecCc-E----Eee---------CCCceeEEecCCceeEEEEEEEeec
Q psy16426 59 WIQNQLVGAMEGDQMTLECHSEAYP-KSINYWTKENG-E----IIA---------QGSKYEPILLDNAYKIHMKLTIKAV 123 (194)
Q Consensus 59 ~~~~~~~~~~~g~~~~l~C~~~~~p-~p~v~W~~~~~-~----~~~---------~~~~~~~~~~~~~~~~~~~L~i~~~ 123 (194)
...+..+.+.+|+.+.|.|...... ...++|++... . ++. ...++.... + ......+|.|.++
T Consensus 3 ~q~p~~~~v~~G~~vtL~C~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~Rf~~~~-~-~~~~~~~L~I~~~ 80 (117)
T 3bp6_A 3 TFYPAWLTVSEGANATFTCSLSNWSEDLMLNWNRLSPSNQTEKQAAFSNGLSQPVQDARFQIIQ-L-PNRHDFHMNILDT 80 (117)
T ss_dssp EEECSEEEECTTCCEEEEEEESSCCTTCEEEEEEECTTCCEEEEEEEETTEEEESSCTTEEEEE-C-TTSSEEEEEESSC
T ss_pred eecCCcEEEeCCCCEEEEeEeecCCCCCEEEEEEeCCCCCceEEEEECCCCccccccCcEEEEE-c-CCCCEEEEEECcC
Confidence 3455667788999999999987643 46788997421 1 110 112333211 1 0112458999999
Q ss_pred CCCCCeEEEEEEEcCCCce----EEEEEEEccc
Q psy16426 124 TKQDFGAYKCVSKNSLGDT----DGSIKLYGKK 152 (194)
Q Consensus 124 ~~~d~g~y~C~a~n~~g~~----~~~~~l~v~~ 152 (194)
+.+|+|.|.|.+.+..+.. .....|.|.+
T Consensus 81 ~~~Dsg~Y~C~~~~~~~~~~~~~~~~t~L~V~~ 113 (117)
T 3bp6_A 81 RRNDSGIYLCGAISLHPKLKIEESPGAELVVTE 113 (117)
T ss_dssp CGGGCEEEEEEEEECSSSCEEEECCCEEEEEC-
T ss_pred CHHHCEEEEEEEEecCCccccccCCcEEEEEEh
Confidence 9999999999998765432 1345666644
No 481
>1pew_A JTO2, A lambda-6 type immunoglobulin light chain, domain; beta sheet, immune system; 1.60A {Homo sapiens} SCOP: b.1.1.1 PDB: 1cd0_A 1pw3_A 2cd0_A 2w0k_A 3b5g_A 3bdx_A* 2w0l_A
Probab=98.53 E-value=5.7e-07 Score=58.68 Aligned_cols=74 Identities=19% Similarity=0.333 Sum_probs=50.2
Q ss_pred cceeEEeeCCeEEEEEE-eeccC-CCccEEEecCcEE---eeC--------CCceeEEe-cCCceeEEEEEEEeecCCCC
Q psy16426 62 NQLVGAMEGDQMTLECH-SEAYP-KSINYWTKENGEI---IAQ--------GSKYEPIL-LDNAYKIHMKLTIKAVTKQD 127 (194)
Q Consensus 62 ~~~~~~~~g~~~~l~C~-~~~~p-~p~v~W~~~~~~~---~~~--------~~~~~~~~-~~~~~~~~~~L~i~~~~~~d 127 (194)
+..+.+.+|+++.|.|. ..+.+ .+.+.|++..... ... ..++.... .. ....+|.|.+++.+|
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~r~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~---~~~~~L~I~~v~~~D 83 (109)
T 1pew_A 7 PHSVSESPGKTVTISCTRSSGNIASNYVQWYQQRSAPITVIYEDNQRPSGVPDRFAGSIDRS---SNSASLTISGLKTED 83 (109)
T ss_dssp CSEEEECTTSCEEEEEEESSSCGGGSCCEEEEC-CCCEEEEBTTTBCCTTCCTTEEEEEETT---TTEEEEEECSCCGGG
T ss_pred CCCEEEcCCCCEEEEEEeCCCCCCCccEEEEEECCCCcEEEEecCCcCCCCCCcEEEEeccC---CCEEEEEECCCChhh
Confidence 56677889999999999 76654 4789999844111 100 12332211 11 124689999999999
Q ss_pred CeEEEEEEEcC
Q psy16426 128 FGAYKCVSKNS 138 (194)
Q Consensus 128 ~g~y~C~a~n~ 138 (194)
+|.|.|.+.+.
T Consensus 84 sG~Y~C~~~~~ 94 (109)
T 1pew_A 84 EADYYCQSYDA 94 (109)
T ss_dssp CEEEEEEEEET
T ss_pred CEEEEEEEEeC
Confidence 99999999874
No 482
>1nez_G T-cell surface glycoprotein CD8 alpha chain; immune system; HET: NAG; 2.10A {Synthetic} SCOP: b.1.1.1 PDB: 1bqh_G* 3b9k_A* 2atp_A* 2arj_R
Probab=98.53 E-value=1.5e-06 Score=58.54 Aligned_cols=40 Identities=18% Similarity=0.209 Sum_probs=32.9
Q ss_pred ccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEec
Q psy16426 7 NVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKE 46 (194)
Q Consensus 7 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~ 46 (194)
+.++.+++.+..+.+.+|++|+|.|.+.+.....+.||+.
T Consensus 2 ~~~~~v~Q~p~~~~v~~G~~vtL~C~~s~~~~~~v~WyrQ 41 (128)
T 1nez_G 2 PQAPELRIFPKKMDAELGQKVDLVCEVLGSVSQGCSWLFQ 41 (128)
T ss_dssp --CCEEEEESSCEEECTTCCEEEEEEEESCCSSCEEEEEE
T ss_pred CcCCeeEECCCeEEEcCCCCEEEEEEeCccCCCcEEEEEe
Confidence 3567889999989999999999999987655577999983
No 483
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.52 E-value=8.5e-08 Score=61.27 Aligned_cols=46 Identities=20% Similarity=0.342 Sum_probs=41.5
Q ss_pred cccccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCce
Q psy16426 4 QGQNVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGE 49 (194)
Q Consensus 4 ~~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~ 49 (194)
..+..+|.+...+.+..+.+|++++|.|.+.|.|.+.+.|++++..
T Consensus 6 ~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~ 51 (99)
T 2yr3_A 6 SGMEVAPSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQP 51 (99)
T ss_dssp SCCCEEEEEEECCCCEEECTTCCEEEECEEEEESCCCCEEEESSSB
T ss_pred CCcccCCceeecCCCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEE
Confidence 3467899999999999999999999999999999999999998765
No 484
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.52 E-value=5.6e-07 Score=68.49 Aligned_cols=78 Identities=18% Similarity=0.288 Sum_probs=53.1
Q ss_pred ccceeEEeeCCeEEEEEEeeccC--CCccEEEecCc-E-E--ee--------------CCCceeEEecCCceeEEEEEEE
Q psy16426 61 QNQLVGAMEGDQMTLECHSEAYP--KSINYWTKENG-E-I--IA--------------QGSKYEPILLDNAYKIHMKLTI 120 (194)
Q Consensus 61 ~~~~~~~~~g~~~~l~C~~~~~p--~p~v~W~~~~~-~-~--~~--------------~~~~~~~~~~~~~~~~~~~L~i 120 (194)
.+....+.+|+++.|.|.+.+.+ .+.+.|++++. . . +. ...++....... ....+|.|
T Consensus 32 ~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~--~~~~sL~I 109 (282)
T 1qok_A 32 QSGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTS--SNTAYLQL 109 (282)
T ss_dssp ECCCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETT--TTEEEEEE
T ss_pred CCCCEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecC--CCeEEEEE
Confidence 44566788999999999998774 57899998531 1 1 00 012222111000 11368999
Q ss_pred eecCCCCCeEEEEEEEcCCC
Q psy16426 121 KAVTKQDFGAYKCVSKNSLG 140 (194)
Q Consensus 121 ~~~~~~d~g~y~C~a~n~~g 140 (194)
.+++.+|.|.|+|.+.|..|
T Consensus 110 ~~v~~~DsG~Y~C~~~n~~g 129 (282)
T 1qok_A 110 SSLTSEDTAVYYCNEGTPTG 129 (282)
T ss_dssp CSCCGGGCEEEEEEEECSSS
T ss_pred CcCChhhCEEEEEEeccCCC
Confidence 99999999999999999876
No 485
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=98.52 E-value=6.5e-07 Score=65.14 Aligned_cols=75 Identities=19% Similarity=0.316 Sum_probs=51.0
Q ss_pred cceeEEeeCCeEEEEEEeecc--CCCccEEEecCc----EEe-------------eCCCceeEEecCCceeEEEEEEEee
Q psy16426 62 NQLVGAMEGDQMTLECHSEAY--PKSINYWTKENG----EII-------------AQGSKYEPILLDNAYKIHMKLTIKA 122 (194)
Q Consensus 62 ~~~~~~~~g~~~~l~C~~~~~--p~p~v~W~~~~~----~~~-------------~~~~~~~~~~~~~~~~~~~~L~i~~ 122 (194)
+..+.+.+|+++.|.|.+.+. +.+.+.|++... ... ....++.... . ....+|.|.+
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~---~~~~~L~I~~ 81 (215)
T 3nl4_H 6 SGGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISK-T---STTVDLKITS 81 (215)
T ss_dssp ECCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEE-C---SSEEEEEESS
T ss_pred CCCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEe-e---CCEEEEEECC
Confidence 345678899999999999763 356789986321 111 0112232221 1 1245899999
Q ss_pred cCCCCCeEEEEEEEcCCC
Q psy16426 123 VTKQDFGAYKCVSKNSLG 140 (194)
Q Consensus 123 ~~~~d~g~y~C~a~n~~g 140 (194)
++.+|.|.|+|.+.|..+
T Consensus 82 v~~~D~G~Y~C~~~~~~~ 99 (215)
T 3nl4_H 82 PTTEDTATYFCVRKYGSE 99 (215)
T ss_dssp CCGGGCEEEEEEEECSSS
T ss_pred CCcccCEEEEEEEecCCC
Confidence 999999999999998755
No 486
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.52 E-value=6.9e-07 Score=63.15 Aligned_cols=75 Identities=15% Similarity=0.292 Sum_probs=50.4
Q ss_pred eEEeeCCeEEEEEEeeccCCC--ccEEEecCcEEeeCCCceeEEecCCceeEEEEEEEeecCCCCCeEEEEEEEcCCCce
Q psy16426 65 VGAMEGDQMTLECHSEAYPKS--INYWTKENGEIIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGAYKCVSKNSLGDT 142 (194)
Q Consensus 65 ~~~~~g~~~~l~C~~~~~p~p--~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~C~a~n~~g~~ 142 (194)
..+.+|+.+.|.|.+.+.+.| .+.|++ ++..+...... .....|.|. ..+|.|.|+|.+.|.. .
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k-~~~~l~~~~~~---------~~~~~l~i~--~~~d~G~Y~C~~~n~~-~- 73 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLK-GGVVLKEDALP---------GQKTEFKVD--SDDQWGEYSCVFLPEP-M- 73 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEES-SSEEEECTTCC---------CSEEEEEEC--GGGCCEEEEEEEESTT-S-
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEe-CCEEeeccccc---------CCcEEEEEe--chhhCeEEEEEEECCc-C-
Confidence 346789999999999988777 788999 55544433211 113456665 5789999999999832 2
Q ss_pred EEEEEEEcccCC
Q psy16426 143 DGSIKLYGKKKK 154 (194)
Q Consensus 143 ~~~~~l~v~~~p 154 (194)
..+.|.|...|
T Consensus 74 -~~~~l~V~~~P 84 (184)
T 3b5h_A 74 -GTANIQLHGPP 84 (184)
T ss_dssp -CEEEEEECCSC
T ss_pred -cEEEEEEecCC
Confidence 34455554443
No 487
>1u3h_A T-cell receptor alpha-chain; complex, immune system; 2.42A {Mus musculus} SCOP: b.1.1.1 PDB: 1b88_A 1kj2_A* 1kb5_A 1d9k_A*
Probab=97.90 E-value=1.3e-08 Score=66.87 Aligned_cols=76 Identities=18% Similarity=0.260 Sum_probs=51.3
Q ss_pred ccceeEEeeCCeEEEEEEeeccCCCccEEEecCc-EEe------------eCCCceeEEecCCceeEEEEEEEeecCCCC
Q psy16426 61 QNQLVGAMEGDQMTLECHSEAYPKSINYWTKENG-EII------------AQGSKYEPILLDNAYKIHMKLTIKAVTKQD 127 (194)
Q Consensus 61 ~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~-~~~------------~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 127 (194)
.+..+.+.+|+++.|.|.+.+.+.+.++|++.+. ... ....++.. .........+|+|.+++.+|
T Consensus 5 ~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~--~~~~~~~~~~L~I~~v~~~D 82 (110)
T 1u3h_A 5 SPQSLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTI--FFNKREKKLSLHIADSQPGD 82 (110)
Confidence 4456678899999999998877778899998432 110 01112211 11001224589999999999
Q ss_pred CeEEEEEEEcC
Q psy16426 128 FGAYKCVSKNS 138 (194)
Q Consensus 128 ~g~y~C~a~n~ 138 (194)
.|.|.|.+.|.
T Consensus 83 sG~Y~C~~~~~ 93 (110)
T 1u3h_A 83 SATYFCAASAN 93 (110)
Confidence 99999999875
No 488
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=98.50 E-value=5.1e-07 Score=67.81 Aligned_cols=78 Identities=19% Similarity=0.299 Sum_probs=52.8
Q ss_pred ccceeEEeeCCeEEEEEEeeccC--CCccEEEecC--cEE--e-e-------------CCCceeEEecCCceeEEEEEEE
Q psy16426 61 QNQLVGAMEGDQMTLECHSEAYP--KSINYWTKEN--GEI--I-A-------------QGSKYEPILLDNAYKIHMKLTI 120 (194)
Q Consensus 61 ~~~~~~~~~g~~~~l~C~~~~~p--~p~v~W~~~~--~~~--~-~-------------~~~~~~~~~~~~~~~~~~~L~i 120 (194)
.+..+.+.+|+++.|.|.+.+.+ .+.+.|++.+ ... + . ...++....... ....+|.|
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~--~~~~~L~I 83 (256)
T 1nqb_A 6 QSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKP--SSTAYMQL 83 (256)
T ss_dssp ECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETT--TTEEEEEE
T ss_pred CCCCeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecC--CCEEEEEE
Confidence 34456788999999999998875 5789999842 111 0 0 012232111100 11458999
Q ss_pred eecCCCCCeEEEEEEEcCCC
Q psy16426 121 KAVTKQDFGAYKCVSKNSLG 140 (194)
Q Consensus 121 ~~~~~~d~g~y~C~a~n~~g 140 (194)
.+++.+|.|.|+|.+.|..|
T Consensus 84 ~~v~~~DsG~Y~C~~~n~~g 103 (256)
T 1nqb_A 84 SSLTSEDSAVYYCARYDYYG 103 (256)
T ss_dssp CSCCGGGCEEEEEEECCTTS
T ss_pred CcCChhhCEEEEEEEeeccC
Confidence 99999999999999999866
No 489
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.50 E-value=2.4e-07 Score=59.26 Aligned_cols=46 Identities=22% Similarity=0.337 Sum_probs=41.5
Q ss_pred ccccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCceE
Q psy16426 5 GQNVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGEI 50 (194)
Q Consensus 5 ~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~l 50 (194)
+...||.|...+.+..+.+|++++|.|.+.|.|.+.+.|++++..+
T Consensus 4 ~~~~~P~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~ 49 (100)
T 2edj_A 4 GSSGPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTF 49 (100)
T ss_dssp SCCSSCEEEECCCCEEEESSSEEEECCEEECSSCCEEEEEESSSEE
T ss_pred CCCCCCEEEeCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEEC
Confidence 4568999999999999999999999999999999999999987653
No 490
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=98.50 E-value=3.9e-07 Score=68.17 Aligned_cols=82 Identities=10% Similarity=0.202 Sum_probs=54.7
Q ss_pred CCeEEeccceeEEeeCCeEEEEEEeecc--CCCccEEEecCc-E---Ee-e-------------CCCceeEEecCCceeE
Q psy16426 55 PPMIWIQNQLVGAMEGDQMTLECHSEAY--PKSINYWTKENG-E---II-A-------------QGSKYEPILLDNAYKI 114 (194)
Q Consensus 55 ~p~i~~~~~~~~~~~g~~~~l~C~~~~~--p~p~v~W~~~~~-~---~~-~-------------~~~~~~~~~~~~~~~~ 114 (194)
++.+...+..+.+.+|+++.|.|.+.+. +.+.+.|++... . .+ . ...++....... ..
T Consensus 6 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~--~~ 83 (256)
T 3juy_B 6 HQVQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTS--AN 83 (256)
T ss_dssp -CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETT--TT
T ss_pred ceEEEEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecC--CC
Confidence 4455566677888999999999999873 567899996321 1 00 0 011232111010 11
Q ss_pred EEEEEEeecCCCCCeEEEEEEEcC
Q psy16426 115 HMKLTIKAVTKQDFGAYKCVSKNS 138 (194)
Q Consensus 115 ~~~L~i~~~~~~d~g~y~C~a~n~ 138 (194)
..+|.|.+++.+|.|.|.|.+.|.
T Consensus 84 ~~~L~I~~v~~~DsG~Y~C~~~~~ 107 (256)
T 3juy_B 84 TAYMELRSLRSADTAVYYCARVGE 107 (256)
T ss_dssp EEEEEECSCCGGGCEEEEEEECCC
T ss_pred EEEEEECCCCcccCEEEEEeEEec
Confidence 357999999999999999999986
No 491
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=98.49 E-value=1.5e-07 Score=78.49 Aligned_cols=89 Identities=24% Similarity=0.309 Sum_probs=64.5
Q ss_pred ceeEEeeCCeEEEEEEe-eccCCCccEEEecCcEEeeC-----------CCceeEEecCCceeEEEEEEEeecCCCCCeE
Q psy16426 63 QLVGAMEGDQMTLECHS-EAYPKSINYWTKENGEIIAQ-----------GSKYEPILLDNAYKIHMKLTIKAVTKQDFGA 130 (194)
Q Consensus 63 ~~~~~~~g~~~~l~C~~-~~~p~p~v~W~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~ 130 (194)
....+..|+++.|.|.+ .+.|.+.+.|++++...... ..+. .... .++|.|.+++.+|.|.
T Consensus 374 ~~~~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~--~~~~-----~~~L~i~~v~~~D~G~ 446 (581)
T 3o3u_N 374 QNITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVA--RVLP-----NGSLFLPAVGIQDEGI 446 (581)
T ss_dssp EEEEEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTS--EECT-----TSCEEESSCCGGGCEE
T ss_pred cccceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcE--EEcC-----CceEEEeccccccCeE
Confidence 34567889999999998 77888899999843311000 1111 1111 2379999999999999
Q ss_pred EEEEEEcCCCce-EEEEEEEcccCCCCCh
Q psy16426 131 YKCVSKNSLGDT-DGSIKLYGKKKKKKKK 158 (194)
Q Consensus 131 y~C~a~n~~g~~-~~~~~l~v~~~p~~p~ 158 (194)
|+|.+.|..+.. ...+.|.|...|..|.
T Consensus 447 Y~C~~~n~~~~~~~~~~~l~V~~~~~~p~ 475 (581)
T 3o3u_N 447 FRCQAMNRNGKETKSNYRVRVYQIPGKPE 475 (581)
T ss_dssp EEEEEECTTSCEEEEEEEEEEEBCCCCCE
T ss_pred EEEEEEcCCCceeEEEEEEEEEcCCCCCE
Confidence 999999999887 6778888877666554
No 492
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=98.49 E-value=4.1e-07 Score=65.92 Aligned_cols=76 Identities=16% Similarity=0.203 Sum_probs=51.0
Q ss_pred cceeEEeeCCeEEEEEEeeccC--CCccEEEecC-c-EE---ee------------CCCceeEEecCCceeEEEEEEEee
Q psy16426 62 NQLVGAMEGDQMTLECHSEAYP--KSINYWTKEN-G-EI---IA------------QGSKYEPILLDNAYKIHMKLTIKA 122 (194)
Q Consensus 62 ~~~~~~~~g~~~~l~C~~~~~p--~p~v~W~~~~-~-~~---~~------------~~~~~~~~~~~~~~~~~~~L~i~~ 122 (194)
+....+.+|+++.|.|.+.+.+ .+.+.|++++ + .. .. ...++....... ...++|.|.+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~~~~~L~I~~ 84 (210)
T 3d9a_H 7 SGPSLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTS--KNQYYLDLNS 84 (210)
T ss_dssp ESCSEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGG--GTEEEEEECS
T ss_pred CCCEEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCC--CCEEEEEECC
Confidence 4556788999999999998865 4789999742 1 11 10 112332111100 1145899999
Q ss_pred cCCCCCeEEEEEEEcCC
Q psy16426 123 VTKQDFGAYKCVSKNSL 139 (194)
Q Consensus 123 ~~~~d~g~y~C~a~n~~ 139 (194)
++.+|.|.|+|.+.|..
T Consensus 85 v~~~D~G~Y~C~~~~~~ 101 (210)
T 3d9a_H 85 VTTEDTATYYCANWDGD 101 (210)
T ss_dssp CCGGGCEEEEEEETTSS
T ss_pred CCcccCEEEEEEEecCc
Confidence 99999999999999864
No 493
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=98.49 E-value=5.2e-07 Score=67.51 Aligned_cols=77 Identities=16% Similarity=0.215 Sum_probs=51.2
Q ss_pred eccceeEEeeCCeEEEEEEeecc--CCCccEEEecCc----EEe---e----------CCCceeEEecCCceeEEEEEEE
Q psy16426 60 IQNQLVGAMEGDQMTLECHSEAY--PKSINYWTKENG----EII---A----------QGSKYEPILLDNAYKIHMKLTI 120 (194)
Q Consensus 60 ~~~~~~~~~~g~~~~l~C~~~~~--p~p~v~W~~~~~----~~~---~----------~~~~~~~~~~~~~~~~~~~L~i 120 (194)
..+....+.+|+++.|.|.+.+. +.+.+.|++.+. ... . ...++...... .....+|.|
T Consensus 13 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~~~L~I 90 (257)
T 3gkz_A 13 QESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDT--SKNQVYLQL 90 (257)
T ss_dssp EEECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEG--GGTEEEEEE
T ss_pred ECCCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEec--CCceEEEEE
Confidence 34455668899999999999884 467889997321 111 0 01122211100 012458999
Q ss_pred eecCCCCCeEEEEEEEcC
Q psy16426 121 KAVTKQDFGAYKCVSKNS 138 (194)
Q Consensus 121 ~~~~~~d~g~y~C~a~n~ 138 (194)
.+++.+|.|.|+|.+.|.
T Consensus 91 ~~v~~~DsG~Y~C~~~n~ 108 (257)
T 3gkz_A 91 KSVSSEDTATYYCSYFDS 108 (257)
T ss_dssp CSCCGGGCEEEEEEEECT
T ss_pred CCCChhhCEEEEEEEecC
Confidence 999999999999999997
No 494
>2i24_N NEW antigen receptor PBLA8; immunoglobulin fold, immune system; 1.35A {Ginglymostoma cirratum} PDB: 2i25_N 2i27_N 2i26_N
Probab=98.49 E-value=1.3e-06 Score=58.28 Aligned_cols=78 Identities=22% Similarity=0.439 Sum_probs=52.5
Q ss_pred EEeccceeEEeeCCeEEEEEEeeccC--CCccEEEecCc-E----EeeCCCceeEEecCCceeEEEEEEEeecCCCCCeE
Q psy16426 58 IWIQNQLVGAMEGDQMTLECHSEAYP--KSINYWTKENG-E----IIAQGSKYEPILLDNAYKIHMKLTIKAVTKQDFGA 130 (194)
Q Consensus 58 i~~~~~~~~~~~g~~~~l~C~~~~~p--~p~v~W~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~g~ 130 (194)
+...+..+.+.+|+++.|.|.+.+.. .+.+.|++... . +.....++....... ....+|.|.+++.+|+|.
T Consensus 3 v~Q~p~~v~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~~~~~~~R~~~~~~~~--~~~~~L~I~~~~~~DsG~ 80 (121)
T 2i24_N 3 VDQTPQRITKETGESLTINCVVRDSRCVLSTGYWYRKPPGSRNEESISDGGRYVETVNRG--SKSFSLRINDLTVKDSGT 80 (121)
T ss_dssp EEEECSEEEEETTCCEEEEEEECSCCCCEEEEEEEEECTTCSCCEEECSBTTEEEEEETT--TTEEEEEECSCCGGGCEE
T ss_pred cEECCcEEEEecCCcEEEEeEccCCCCCCCEEEEEEeCCCCCceeeEecCCCeEEEecCC--CCEEEEEECCCChhhCEE
Confidence 34456677889999999999987643 45788997532 1 122223443221111 124689999999999999
Q ss_pred EEEEEEc
Q psy16426 131 YKCVSKN 137 (194)
Q Consensus 131 y~C~a~n 137 (194)
|.|.+..
T Consensus 81 Y~C~~~~ 87 (121)
T 2i24_N 81 YRCKPES 87 (121)
T ss_dssp EEEEEEE
T ss_pred EEEEEec
Confidence 9999974
No 495
>2h32_A Immunoglobulin IOTA chain; beta sheets, V and C-type IG folds, immune system; 2.70A {Homo sapiens}
Probab=98.48 E-value=1.4e-07 Score=63.45 Aligned_cols=92 Identities=13% Similarity=0.250 Sum_probs=55.9
Q ss_pred cceeEEeeCCeEEEEEEeecc---CCCccEEEecCc----E-Eee---C---------CCceeEEecCCceeEEEEEEEe
Q psy16426 62 NQLVGAMEGDQMTLECHSEAY---PKSINYWTKENG----E-IIA---Q---------GSKYEPILLDNAYKIHMKLTIK 121 (194)
Q Consensus 62 ~~~~~~~~g~~~~l~C~~~~~---p~p~v~W~~~~~----~-~~~---~---------~~~~~~~~~~~~~~~~~~L~i~ 121 (194)
+..+.+.+|+.+.|.|...+. ....++|++... . +.. . ..++.... + ......+|.|.
T Consensus 7 p~~v~v~~G~~vtL~C~~s~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~-~-~~~~~~sL~I~ 84 (126)
T 2h32_A 7 PPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPRFLLRYFSQSDKSQGPQVPPRFSGSK-D-VARNRGYLSIS 84 (126)
T ss_dssp CSEEEEETTCCEEEEEEECTTSCGGGCEEEEEEECTTSCCEEEEEEEETTEEEECTTCCTTEEEEE-E-GGGTEEEEEEC
T ss_pred CCCEEECCCCCEEEEEEecCCCccccceEEEEEECCCCCCEEEEEEECCCCEEeCCCCCCCEEEEE-e-CCCCeEEEEEC
Confidence 446778899999999998764 245688997431 1 111 0 11222111 0 01124689999
Q ss_pred ecCCCCCeEEEEEEEcCCCceEEEEEEEcccCCC
Q psy16426 122 AVTKQDFGAYKCVSKNSLGDTDGSIKLYGKKKKK 155 (194)
Q Consensus 122 ~~~~~d~g~y~C~a~n~~g~~~~~~~l~v~~~p~ 155 (194)
+++.+|+|.|.|.+.+..+.......|.|.+.+.
T Consensus 85 ~~~~~DsG~Y~C~~~~~~~~~~~~t~l~v~~~~~ 118 (126)
T 2h32_A 85 ELQPEDEAMYYCAMGARSSEKEEREREWEEEMEP 118 (126)
T ss_dssp SCCGGGCEEEEEEEECSCCCCCCTTCC-------
T ss_pred CCChhHCEEEEEEEEcCCCCcceeEEEeeccCCC
Confidence 9999999999999998877665555666655443
No 496
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=98.47 E-value=2e-07 Score=59.42 Aligned_cols=43 Identities=16% Similarity=0.187 Sum_probs=39.2
Q ss_pred ccCCeEEEcCCeeeeeCCCcEEEEeeeeccCCceeEEEecCce
Q psy16426 7 NVPPMIWIQNQLVGAMEGDQMTLECHSEAYPKSINYWTKENGE 49 (194)
Q Consensus 7 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~ 49 (194)
..+|.|...+.+..+.+|++++|.|.+.|.|.+.+.|++++..
T Consensus 3 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~ 45 (99)
T 1g1c_A 3 MEAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVK 45 (99)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEE
T ss_pred CCCCceEecCcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEE
Confidence 3678999999999999999999999999999999999998765
No 497
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=98.47 E-value=9.9e-07 Score=64.61 Aligned_cols=88 Identities=18% Similarity=0.216 Sum_probs=56.7
Q ss_pred ceeEEeeCCeEEEEEEeeccC--CCccEEEecCc-E---Ee-e-------------CCCceeEEecCCceeEEEEEEEee
Q psy16426 63 QLVGAMEGDQMTLECHSEAYP--KSINYWTKENG-E---II-A-------------QGSKYEPILLDNAYKIHMKLTIKA 122 (194)
Q Consensus 63 ~~~~~~~g~~~~l~C~~~~~p--~p~v~W~~~~~-~---~~-~-------------~~~~~~~~~~~~~~~~~~~L~i~~ 122 (194)
..+.+.+|+++.|.|.+.+.+ .+.++|++.+. . .+ . ...++.... +. .....+|.|.+
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~-~~-~~~~~~L~I~~ 85 (220)
T 2fbj_H 8 GGGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISR-DN-AKNSLYLQMSK 85 (220)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEE-CS-SSCEEEEEECS
T ss_pred CCeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEe-eC-CCCEEEEEECC
Confidence 456788999999999998765 57899997431 1 11 0 012332111 10 11246899999
Q ss_pred cCCCCCeEEEEEEEcCCCc---eEEEEEEEccc
Q psy16426 123 VTKQDFGAYKCVSKNSLGD---TDGSIKLYGKK 152 (194)
Q Consensus 123 ~~~~d~g~y~C~a~n~~g~---~~~~~~l~v~~ 152 (194)
++.+|.|.|+|.+.|..+. ......|.|..
T Consensus 86 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~ 118 (220)
T 2fbj_H 86 VRSEDTALYYCARLHYYGYNAYWGQGTLVTVSA 118 (220)
T ss_dssp CCGGGCEEEEEEEEETTTEEEEECCCEEEEECS
T ss_pred CChhhCEEEEEEEeccccccceecCCEEEEecC
Confidence 9999999999999987542 11234566654
No 498
>3r0n_A Poliovirus receptor-related protein 2; IG-domain, cell-adhesion molecule, virus entry receptor, STR genomics, PSI-biology; 1.30A {Homo sapiens} PDB: 4dfh_A 4dfi_A
Probab=98.47 E-value=5.2e-07 Score=60.41 Aligned_cols=88 Identities=17% Similarity=0.263 Sum_probs=56.0
Q ss_pred ccceeEEeeCCeEEEEEEeeccCCC----ccEEEecCc---------------EEeeC----CCceeEEecCCce-----
Q psy16426 61 QNQLVGAMEGDQMTLECHSEAYPKS----INYWTKENG---------------EIIAQ----GSKYEPILLDNAY----- 112 (194)
Q Consensus 61 ~~~~~~~~~g~~~~l~C~~~~~p~p----~v~W~~~~~---------------~~~~~----~~~~~~~~~~~~~----- 112 (194)
.+..+.+.+|+++.|.|.....+.+ .+.|++.+. ..... ..+.. ......
T Consensus 8 ~p~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~--~~~~~~~~g~~ 85 (128)
T 3r0n_A 8 VLPEVRGQLGGTVELPCHLLPPVPGLYISLVTWQRPDAPANHQNVAAFHPKMGPSFPSPKPGSERLS--FVSAKQSTGQD 85 (128)
T ss_dssp CCSEEECCTTSCEEECCEEESCCTTCEEEEEEEECTTSCGGGCEEEEEETTTEEECCSSSSCGGGEE--ESSCBCCCSTT
T ss_pred cCCeEEEEcCCCEEEEEEeecCCCCCcEEEEEEEEeCCCCCCeeEEEEecccCcccccccccCCcEE--Eeccccccccc
Confidence 3455677889999999998876554 688998421 11111 01111 111100
Q ss_pred ----eEEEEEEEeecCCCCCeEEEEEEEc-CCCceEEEEEEEc
Q psy16426 113 ----KIHMKLTIKAVTKQDFGAYKCVSKN-SLGDTDGSIKLYG 150 (194)
Q Consensus 113 ----~~~~~L~i~~~~~~d~g~y~C~a~n-~~g~~~~~~~l~v 150 (194)
....+|.|.+++.+|.|.|+|.+.+ ..|.......|.|
T Consensus 86 ~~~~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~g~~~~~~~L~V 128 (128)
T 3r0n_A 86 TEAELQDATLALHGLTVEDEGNYTCEFATFPKGSVRGMTWLRV 128 (128)
T ss_dssp CCCBCSBCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEC
T ss_pred cccCCCCeEEEEccCCchhCeEEEEEEEeCCCCCcccEEEEEC
Confidence 0134899999999999999998765 5576666766654
No 499
>1fo0_A Protein (BM3.3 T cell receptor alpha-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_A*
Probab=98.45 E-value=7.2e-07 Score=58.88 Aligned_cols=77 Identities=19% Similarity=0.343 Sum_probs=51.4
Q ss_pred EeccceeEEeeCCeEEEEEEeecc-CCCccEEEecCc-E---Ee-e-C--------CCceeEEecCCceeEEEEEEEeec
Q psy16426 59 WIQNQLVGAMEGDQMTLECHSEAY-PKSINYWTKENG-E---II-A-Q--------GSKYEPILLDNAYKIHMKLTIKAV 123 (194)
Q Consensus 59 ~~~~~~~~~~~g~~~~l~C~~~~~-p~p~v~W~~~~~-~---~~-~-~--------~~~~~~~~~~~~~~~~~~L~i~~~ 123 (194)
...+..+.+.+|+++.|.|...+. +.+.++|++... . .+ . . ..++.... + ......+|.|.++
T Consensus 4 ~q~p~~~~~~~G~~vtL~C~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~R~~~~~-~-~~~~~~~L~I~~~ 81 (116)
T 1fo0_A 4 TQTQTSISVMEKTTVTMDCVYETQDSSYFLFWYKQTASGEIVFLIRQDSYKKENATVGHYSLNF-Q-KPKSSIGLIITAT 81 (116)
T ss_dssp ECCCCEEEEETTCCEEECCEECCCCSSCEEEEEEECTTCCEEEEEEEETTCCSCCEETTEEEEE-E-GGGTEEEEEECSC
T ss_pred CcCCCcEEEecCCcEEEEeEecCCCCCeEEEEEEeCCCCCeEEEEEEccCCcCcccCCcEEEEE-e-CCCCEEEEEECCC
Confidence 344566778999999999998776 555789997431 1 11 0 0 11222111 0 1112468999999
Q ss_pred CCCCCeEEEEEEEc
Q psy16426 124 TKQDFGAYKCVSKN 137 (194)
Q Consensus 124 ~~~d~g~y~C~a~n 137 (194)
+.+|.|.|.|.+.+
T Consensus 82 ~~~DsG~Y~C~~~~ 95 (116)
T 1fo0_A 82 QIEDSAVYFCAMRG 95 (116)
T ss_dssp CGGGCEEEEEEEEC
T ss_pred ChhhCEEEEEEEEc
Confidence 99999999999987
No 500
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=98.45 E-value=3.5e-08 Score=72.05 Aligned_cols=92 Identities=17% Similarity=0.220 Sum_probs=57.5
Q ss_pred eeEEeeCCeEEEEEEeeccCC-----CccEEEecCcEEee------------CCCceeEEecCCceeEEEEEEEeecCCC
Q psy16426 64 LVGAMEGDQMTLECHSEAYPK-----SINYWTKENGEIIA------------QGSKYEPILLDNAYKIHMKLTIKAVTKQ 126 (194)
Q Consensus 64 ~~~~~~g~~~~l~C~~~~~p~-----p~v~W~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 126 (194)
.+.+.+|+++.|.|.+.+.+. +.+.|++++..... ...+.. ...+.......+|.|.+++.+
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~-~~~~~~~~~~~sL~I~~v~~~ 82 (222)
T 4i0k_A 4 PVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTA-LFPDLLVQGNASLRLQRVRVT 82 (222)
T ss_dssp CCCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEE-CCTTTGGGTBCCEEECSCCGG
T ss_pred CEEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEE-EecccccCCeEEEEECCcccc
Confidence 455778999999999887653 67889985433210 011111 011100111358999999999
Q ss_pred CCeEEEEEEEcCCCceEEEEEEEcccCCCCC
Q psy16426 127 DFGAYKCVSKNSLGDTDGSIKLYGKKKKKKK 157 (194)
Q Consensus 127 d~g~y~C~a~n~~g~~~~~~~l~v~~~p~~p 157 (194)
|.|.|+|.+.|. +.....+.|.|...+..|
T Consensus 83 D~G~Y~C~~~~~-~~~~~~~~l~V~~~~~~p 112 (222)
T 4i0k_A 83 DEGSYTCFVSIQ-DFDSAAVSLQVAAPYSKP 112 (222)
T ss_dssp GCSCEEEEEEEC-CCCCCCCCCCCCBCCCCC
T ss_pred cCEEEEEEEEeC-CCceEEEEEEEEcCCCCC
Confidence 999999999985 344455566665554433
Done!