Query psy16427
Match_columns 146
No_of_seqs 131 out of 890
Neff 5.4
Searched_HMMs 13730
Date Fri Aug 16 21:00:54 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16427.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/16427hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1zeda1 c.76.1.1 (A:1-479) Alk 100.0 2.3E-34 1.6E-38 251.6 13.1 127 14-144 2-149 (479)
2 d1k7ha_ c.76.1.1 (A:) Alkaline 100.0 2.1E-32 1.6E-36 238.5 12.5 122 18-144 1-145 (476)
3 d1y6va1 c.76.1.1 (A:1-449) Alk 99.9 7.6E-26 5.6E-30 196.1 4.3 114 22-144 19-149 (449)
4 d1hdha_ c.76.1.2 (A:) Arylsulf 92.9 0.014 1E-06 46.5 1.3 19 124-142 92-110 (525)
5 d1auka_ c.76.1.2 (A:) Arylsulf 91.8 0.024 1.7E-06 45.3 1.4 83 48-141 1-103 (485)
6 d1fsua_ c.76.1.2 (A:) Arylsulf 89.4 0.13 9.2E-06 40.8 3.7 19 124-142 85-103 (492)
7 d1p49a_ c.76.1.2 (A:) Steryl-s 79.4 0.39 2.8E-05 38.1 2.1 82 50-142 5-111 (553)
8 d2i09a1 c.76.1.5 (A:2-107,A:22 60.4 2.1 0.00015 29.0 2.1 14 49-62 3-16 (283)
9 d1qvra3 c.37.1.20 (A:536-850) 45.0 5.7 0.00042 30.3 2.6 43 23-65 26-69 (315)
10 d1o98a2 c.76.1.3 (A:2-76,A:311 40.2 6 0.00044 26.7 1.8 13 51-64 5-17 (275)
11 d2hsja1 c.23.10.3 (A:1-211) Un 37.7 6.7 0.00049 27.1 1.8 34 21-58 6-39 (211)
12 d1ei6a_ c.76.1.4 (A:) Phosphon 31.6 12 0.00084 26.2 2.2 19 49-67 15-33 (406)
13 d1r6bx3 c.37.1.20 (X:437-751) 28.4 15 0.0011 27.5 2.6 44 22-65 24-68 (315)
14 d1shux_ c.62.1.1 (X:) Capillar 27.8 23 0.0017 23.4 3.3 17 46-62 99-115 (181)
15 d2jfga1 c.5.1.1 (A:1-93) UDP-N 27.3 27 0.002 21.1 3.3 23 49-74 5-27 (93)
16 d1pvda3 c.36.1.9 (A:361-556) P 26.2 8.2 0.0006 27.1 0.5 24 48-71 74-100 (196)
17 d1nija2 d.237.1.1 (A:224-318) 25.1 31 0.0023 21.2 3.3 20 48-67 69-88 (95)
18 d1ns5a_ c.116.1.3 (A:) Hypothe 24.8 13 0.00098 25.1 1.5 14 50-63 96-111 (153)
19 d1ls1a2 c.37.1.10 (A:89-295) G 23.5 24 0.0017 25.2 2.7 23 42-64 2-25 (207)
20 d1y7pa1 c.23.1.7 (A:79-217) Hy 23.3 5.9 0.00043 27.5 -0.7 42 53-96 10-51 (139)
21 d2iida1 c.3.1.2 (A:4-319,A:433 22.1 89 0.0065 20.9 5.7 41 45-94 26-66 (370)
22 d1dqaa1 d.58.20.1 (A:587-703) 22.0 37 0.0027 22.5 3.4 48 22-69 20-78 (117)
23 d2c42a2 c.36.1.12 (A:786-1232) 20.2 77 0.0056 25.5 5.6 21 48-68 168-192 (447)
No 1
>d1zeda1 c.76.1.1 (A:1-479) Alkaline phosphatase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=2.3e-34 Score=251.64 Aligned_cols=127 Identities=31% Similarity=0.432 Sum_probs=115.1
Q ss_pred ccccccChhHHHHHHHHHHHHHHhccCCCCCCCCCCceEEEEeecCCCHHHHHHHHHHhccccCCCCCcccccccCccce
Q psy16427 14 YHHSFLDKEFWYKDAQEGIRRRLALFGESHLPEDRAKNIILMVGDGMGLSTLTASRILKGQRMGIHGEEYHLAWDKFPAV 93 (146)
Q Consensus 14 ~~~~~~~~~~W~~~a~~~l~~~l~~~~~~~~~~~~aKNVIlfIGDGMG~~~vtaAR~~~g~~~g~~g~~~~L~~d~fp~~ 93 (146)
++++|++++||+++|+++|+++++.++ +.++|||||||||||||++++++||+|+++..+..|++.+|.||+||+.
T Consensus 2 ~~~~~~~~~~w~~~~~~~l~~~~~~~~----~~~~AKNVIl~IgDGmg~~~~taaR~~~g~~~~~~g~~~~L~~d~~p~~ 77 (479)
T d1zeda1 2 IPVEEENPDFWNREAAEALGAAKKLQP----AQTAAKNLIIFLGDGMGVSTVTAARILKGQKKDKLGPEIPLAMDRFPYV 77 (479)
T ss_dssp CCGGGGSHHHHHHHHHHHHHHHHHCCC----CSBCCSEEEEEEETTCCHHHHHHHHHHHHHHTTSCSTTSCCTGGGCSEE
T ss_pred CCccccCHHHHHHHHHHHHHHHHhcCc----cCCCCCeEEEEEeCCCCHHHHHHHHHHhccccCCCCcCCccccccCcee
Confidence 467889999999999999999999887 7889999999999999999999999999988888899999999999999
Q ss_pred eeEeeccCCCee----------eeeeccCCCcccccCCcC-----------CCchhHHHHhccceeeeeeec
Q psy16427 94 ALAKQFSSGGII----------LCQLGQRMGIHGEEYHLA-----------WDKFPAVALAKHYVTAHISAQ 144 (146)
Q Consensus 94 Gl~~Tys~ds~v----------atG~KT~ng~IGvd~~~~-----------~~~~~~v~~~~g~~~~~~~~~ 144 (146)
|+++|||.|++| +||+||+||+||||++.. ...+-+.++++||.|||||+.
T Consensus 78 g~~~T~s~d~~vtDSAa~aTA~atG~Kt~ng~igvd~~~~~~~~~~~~~~~~~tIle~Ak~~G~~tGiVTT~ 149 (479)
T d1zeda1 78 ALSKTYNVDKHVPDSGATATAYLCGVKGNFQTIGLSAAARFNQCNTTRGNEVISVMNRAKKAGKSVGVVTTT 149 (479)
T ss_dssp EEEECCCSSCSSCCHHHHHHHHHHSSCCCTTCBSBCTTSCTTCGGGCTTCBCCCHHHHHHHTTCEEEEEEEE
T ss_pred EEEecccCCCCCCChHHHHHHHHhCccccCceeecccccccCccccccccchHHHHHHHHHcCCceeeeecc
Confidence 999999999998 799999999999998732 234455668999999999985
No 2
>d1k7ha_ c.76.1.1 (A:) Alkaline phosphatase {Northern shrimp (Pandalus borealis) [TaxId: 6703]}
Probab=99.97 E-value=2.1e-32 Score=238.49 Aligned_cols=122 Identities=30% Similarity=0.490 Sum_probs=108.4
Q ss_pred ccChhHHHHHHHHHHHHHHhccCCCCCCCCCCceEEEEeecCCCHHHHHHHHHHhccccCCCCCcccccccCccceeeEe
Q psy16427 18 FLDKEFWYKDAQEGIRRRLALFGESHLPEDRAKNIILMVGDGMGLSTLTASRILKGQRMGIHGEEYHLAWDKFPAVALAK 97 (146)
Q Consensus 18 ~~~~~~W~~~a~~~l~~~l~~~~~~~~~~~~aKNVIlfIGDGMG~~~vtaAR~~~g~~~g~~g~~~~L~~d~fp~~Gl~~ 97 (146)
|++++||++.|++.|.+++.... +.++|||||||||||||++++++||+|.++..|.. +..+|.||+||+.|+++
T Consensus 1 ~~~~~~w~~~~~~~~~~~~~~~~----~~k~aKNVIl~IgDGMg~~~~taar~~~~g~~g~~-~~~~l~~d~~p~~g~~~ 75 (476)
T d1k7ha_ 1 EEDKAYWNKDAQDALDKQLGIKL----REKQAKNVIFFLGDGMSLSTVTAARIYKGGLTGKF-EREKISWEEFDFAALSK 75 (476)
T ss_dssp CCCHHHHHHHHHHHHHHHHTCCC----CCSCCSEEEEEEETTCCHHHHHHHHHHHHHHHTCG-GGCCCGGGGSSEEEEEE
T ss_pred CCChHHHHHHHHHHHHHHHhccc----cCCCCCeEEEEEeCCCCHHHHHHHHHHhcCCCCCC-cCCccchhcCchhheee
Confidence 56899999999999999998777 78999999999999999999999999998766543 44589999999999999
Q ss_pred eccCCCee----------eeeeccCCCcccccCCcCC-------------CchhHHHHhccceeeeeeec
Q psy16427 98 QFSSGGII----------LCQLGQRMGIHGEEYHLAW-------------DKFPAVALAKHYVTAHISAQ 144 (146)
Q Consensus 98 Tys~ds~v----------atG~KT~ng~IGvd~~~~~-------------~~~~~v~~~~g~~~~~~~~~ 144 (146)
|||.|++| +||+||+||+||||++... ..+.+.++++||.|||||+.
T Consensus 76 T~s~d~~vtDSAa~aTA~atG~KT~ng~igvd~~~~~~~~~~~~~~~~~~~ti~e~A~~~G~~tGlVTT~ 145 (476)
T d1k7ha_ 76 TYNTDKQVTDSAASATAYLTGVKTNQGVIGLDANTVRTNCSYQLDESLFTYSIAHWFQEAGRSTGVVTST 145 (476)
T ss_dssp CCCSSCSSCCHHHHHHHHHHSCCCCTTCBSBCTTCCTTCGGGGGCGGGBCCCHHHHHHHTTCEEEEEEEE
T ss_pred ccCCCCCCCCcHHHHHHHHhceecCCCeEEECCCcCcCccccccccccccchHHHHHHHcCCceeEEecc
Confidence 99999998 7999999999999997632 34556779999999999985
No 3
>d1y6va1 c.76.1.1 (A:1-449) Alkaline phosphatase {Escherichia coli [TaxId: 562]}
Probab=99.91 E-value=7.6e-26 Score=196.08 Aligned_cols=114 Identities=23% Similarity=0.228 Sum_probs=86.0
Q ss_pred hHHHHHHHHHHHHHHhccCCCCCCCCCCceEEEEeecCCCHHHHHHHHHHhccccCCCCCcccccccCccceeeEeecc-
Q psy16427 22 EFWYKDAQEGIRRRLALFGESHLPEDRAKNIILMVGDGMGLSTLTASRILKGQRMGIHGEEYHLAWDKFPAVALAKQFS- 100 (146)
Q Consensus 22 ~~W~~~a~~~l~~~l~~~~~~~~~~~~aKNVIlfIGDGMG~~~vtaAR~~~g~~~g~~g~~~~L~~d~fp~~Gl~~Tys- 100 (146)
..|-.+.+.+..++|+... +.++|||||||||||||+++++|||+|+++..|. .+.||+||+.+.++||+
T Consensus 19 ~~~~~~~~~~~~~~~~~~~----~~k~AKNVIlfIgDGMg~~~~tAaR~~~~g~~g~-----~~~~e~~p~~~~~~~~~~ 89 (449)
T d1y6va1 19 PGGARRLTGDQTAALRDSL----SDKPAKNIILLIGDGMGDSEITAARNYAEGAGGF-----FKGIDALPLTGQYTHYAL 89 (449)
T ss_dssp TTTTCSCSSCCHHHHHHTC----CCSCCSEEEEEEETTCCHHHHHHHHHHHTCTTCC-----CTTGGGCSEEEEEECCEE
T ss_pred cchhhhcchhHHHHHHhhh----cCCCCceEEEEEeCCCCHHHHHHHHHHHhCcCCC-----cCCcccCcccccceeeee
Confidence 3344444444555566555 8899999999999999999999999998754432 34566666666555555
Q ss_pred -----CCCee----------eeeeccCCCcccccCCc-CCCchhHHHHhccceeeeeeec
Q psy16427 101 -----SGGII----------LCQLGQRMGIHGEEYHL-AWDKFPAVALAKHYVTAHISAQ 144 (146)
Q Consensus 101 -----~ds~v----------atG~KT~ng~IGvd~~~-~~~~~~~v~~~~g~~~~~~~~~ 144 (146)
.|++| +||+||+||+||||++. ...++-+.++.+||.||+||+.
T Consensus 90 ~~t~~~~~~vtDSAataTA~atGvKT~ng~igvd~~~~~~~sI~e~A~~~G~~tGiVTT~ 149 (449)
T d1y6va1 90 NKKTGKPDYVTDSAASATAWSTGVKTYNGALGVDIHEKDHPTILEMAKAAGLATGNVSTA 149 (449)
T ss_dssp CTTTCSEESSCCHHHHHHHHHHSCCCBTTCBSBCTTCCBCCCHHHHHHHTTCEEEEEEEE
T ss_pred ccccCCCccccccHHHHHHHHHcccccCceEeecCCCCCCCCHHHHHHHcCCCeeEEeec
Confidence 44556 79999999999999987 5556666779999999999985
No 4
>d1hdha_ c.76.1.2 (A:) Arylsulfatase B (4-sulfatase) {Pseudomonas aeruginosa [TaxId: 287]}
Probab=92.93 E-value=0.014 Score=46.51 Aligned_cols=19 Identities=16% Similarity=0.111 Sum_probs=16.4
Q ss_pred CCchhHHHHhccceeeeee
Q psy16427 124 WDKFPAVALAKHYVTAHIS 142 (146)
Q Consensus 124 ~~~~~~v~~~~g~~~~~~~ 142 (146)
...+|.++++.||.|+.|.
T Consensus 92 ~~tl~~~L~~~GY~T~~~G 110 (525)
T d1hdha_ 92 VVALPELLREAGYQTLMAG 110 (525)
T ss_dssp SCCHHHHHHTTTCEEEEEE
T ss_pred cchHHHHHHHcCCCccccc
Confidence 4568999999999999986
No 5
>d1auka_ c.76.1.2 (A:) Arylsulfatase A {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.85 E-value=0.024 Score=45.27 Aligned_cols=83 Identities=24% Similarity=0.324 Sum_probs=45.4
Q ss_pred CCceEEEEeecCCCHHHHHHHHHHhccccCCCCCcccccccCccceeeE--eeccCCCe-------eeeeecc-CCCc--
Q psy16427 48 RAKNIILMVGDGMGLSTLTASRILKGQRMGIHGEEYHLAWDKFPAVALA--KQFSSGGI-------ILCQLGQ-RMGI-- 115 (146)
Q Consensus 48 ~aKNVIlfIGDGMG~~~vtaAR~~~g~~~g~~g~~~~L~~d~fp~~Gl~--~Tys~ds~-------vatG~KT-~ng~-- 115 (146)
|+.||||++.|.++...+.+. |. .....=+||+|---|+. +.|+.... +.||.-. .+|+
T Consensus 1 k~PNIl~I~~Dd~~~~~lg~y----G~-----~~~~TPnlD~LA~~G~~F~nay~~~p~C~PSR~sllTG~yp~~~G~~~ 71 (485)
T d1auka_ 1 RPPNIVLIFADDLGYGDLGCY----GH-----PSSTTPNLDQLAAGGLRFTDFYVPVSLGTPSRAALLTGRLPVRMGMYP 71 (485)
T ss_dssp CCCEEEEEEESSCCTTTSGGG----TC-----SSCCCHHHHHHHHTSEEESSEECSSSSHHHHHHHHHHSSCGGGGTCCS
T ss_pred CCCeEEEEEecCCCCCccccC----cC-----CCCCCHHHHHHHHcCceecCcCCCCCccHHHHHHHHHCcCHHHhCCcC
Confidence 467999999999998766542 11 11122344444333333 22333322 2455422 1111
Q ss_pred --------ccccCCcCCCchhHHHHhccceeeee
Q psy16427 116 --------HGEEYHLAWDKFPAVALAKHYVTAHI 141 (146)
Q Consensus 116 --------IGvd~~~~~~~~~~v~~~~g~~~~~~ 141 (146)
.++.. ....++.+.++.||.|+.+
T Consensus 72 ~~~~~~~~~~l~~--~~~tl~~~Lk~~GY~T~~~ 103 (485)
T d1auka_ 72 GVLVPSSRGGLPL--EEVTVAEVLAARGYLTGMA 103 (485)
T ss_dssp SCCCTTBSCBSCT--TSCCHHHHHHTTTCEEEEE
T ss_pred CccCCcccCCCCc--ccccHHHHHHhcCCccccc
Confidence 12222 2346899999999999987
No 6
>d1fsua_ c.76.1.2 (A:) Arylsulfatase B (4-sulfatase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.42 E-value=0.13 Score=40.80 Aligned_cols=19 Identities=16% Similarity=0.211 Sum_probs=16.3
Q ss_pred CCchhHHHHhccceeeeee
Q psy16427 124 WDKFPAVALAKHYVTAHIS 142 (146)
Q Consensus 124 ~~~~~~v~~~~g~~~~~~~ 142 (146)
...+|.++++.||.|+.+.
T Consensus 85 ~~tl~~~L~~~GY~T~~~G 103 (492)
T d1fsua_ 85 EKLLPQLLKEAGYTTHMVG 103 (492)
T ss_dssp CCCHHHHHHHTTCEEEEEE
T ss_pred cchHHHHHHHcCCCeeecc
Confidence 3468999999999999985
No 7
>d1p49a_ c.76.1.2 (A:) Steryl-sulfatase {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.39 E-value=0.39 Score=38.06 Aligned_cols=82 Identities=20% Similarity=0.257 Sum_probs=44.8
Q ss_pred ceEEEEeecCCCHHHHHHHHHHhccccCCCCCcccccccCccceeeEe--eccCCCe-------eeeeecc-CCCc----
Q psy16427 50 KNIILMVGDGMGLSTLTASRILKGQRMGIHGEEYHLAWDKFPAVALAK--QFSSGGI-------ILCQLGQ-RMGI---- 115 (146)
Q Consensus 50 KNVIlfIGDGMG~~~vtaAR~~~g~~~g~~g~~~~L~~d~fp~~Gl~~--Tys~ds~-------vatG~KT-~ng~---- 115 (146)
.||||++.|=|+.+.+.+. |. .....=+||+|--.|+.= .|+.... +.||.-. ..|+
T Consensus 5 PNIl~I~~Dd~~~~~~g~~----G~-----~~~~TPnlD~LA~~G~~F~nay~~~p~C~PSRasllTG~yp~~~gv~~~~ 75 (553)
T d1p49a_ 5 PNIILVMADDLGIGDPGCY----GN-----KTIRTPNIDRLASGGVKLTQHLAASPLATPSRAAFMTGRYPVRSGMASWS 75 (553)
T ss_dssp CEEEEEEESSCCTTSSGGG----TC-----SSSCCHHHHTTTTTSEEESSEECSCCC-CHHHHHHHHSSCGGGGTCSCSS
T ss_pred CeEEEEEecCCCCCCcCcC----CC-----CCCCChHHHHHHHcCccccCcccCCcccHHHHHHHHHCcChhhhCCcccc
Confidence 4999999999998766542 11 011234555554333332 2333222 2455432 1111
Q ss_pred -----------ccccCCcCCCchhHHHHhccceeeeee
Q psy16427 116 -----------HGEEYHLAWDKFPAVALAKHYVTAHIS 142 (146)
Q Consensus 116 -----------IGvd~~~~~~~~~~v~~~~g~~~~~~~ 142 (146)
.++.++ ...+|.++++.||.|+.|-
T Consensus 76 ~~~~~~~~~~~~~l~~~--~~tl~~~Lk~~GY~T~~~G 111 (553)
T d1p49a_ 76 RTGVFLFTASSGGLPTD--EITFAKLLKDQGYSTALIG 111 (553)
T ss_dssp SCCSCCCTTCCCCSCTT--CCCHHHHHHHTTCEEEEEE
T ss_pred cCCcccCCcccCCCCcc--cccHHHHHHHCCCeEEEeC
Confidence 112222 3468999999999999883
No 8
>d2i09a1 c.76.1.5 (A:2-107,A:227-403) Phosphopentomutase DeoB {Streptococcus mutans [TaxId: 1309]}
Probab=60.38 E-value=2.1 Score=28.99 Aligned_cols=14 Identities=36% Similarity=0.508 Sum_probs=12.2
Q ss_pred CceEEEEeecCCCH
Q psy16427 49 AKNIILMVGDGMGL 62 (146)
Q Consensus 49 aKNVIlfIGDGMG~ 62 (146)
-|||||++-|++|+
T Consensus 3 ~k~vvlIv~D~lg~ 16 (283)
T d2i09a1 3 FNRIHLVVLDSVGI 16 (283)
T ss_dssp CSEEEEEEETTCCC
T ss_pred CCEEEEEEECCCCC
Confidence 48999999999874
No 9
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=44.97 E-value=5.7 Score=30.29 Aligned_cols=43 Identities=16% Similarity=0.223 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCCCCceEEEEeec-CCCHHHH
Q psy16427 23 FWYKDAQEGIRRRLALFGESHLPEDRAKNIILMVGD-GMGLSTL 65 (146)
Q Consensus 23 ~W~~~a~~~l~~~l~~~~~~~~~~~~aKNVIlfIGD-GMG~~~v 65 (146)
+|.+.|.+.+.+++....-.-.+..+|+++|+|+|. |.|=..+
T Consensus 26 ~GQ~~ai~~v~~~i~~~~~~l~~~~kp~~~~lf~Gp~G~GKt~l 69 (315)
T d1qvra3 26 VGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTEL 69 (315)
T ss_dssp CSCHHHHHHHHHHHHHHGGGCSCSSSCSEEEEEBSCSSSSHHHH
T ss_pred eCHHHHHHHHHHHHHHHhcCCCCCCCCceEEEEECCCcchHHHH
Confidence 688888888888765321000145789999999986 8876544
No 10
>d1o98a2 c.76.1.3 (A:2-76,A:311-510) 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, catalytic domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=40.16 E-value=6 Score=26.65 Aligned_cols=13 Identities=23% Similarity=0.468 Sum_probs=8.1
Q ss_pred eEEEEeecCCCHHH
Q psy16427 51 NIILMVGDGMGLST 64 (146)
Q Consensus 51 NVIlfIGDGMG~~~ 64 (146)
||+ +|-||+|...
T Consensus 5 vvl-iilD~~G~~~ 17 (275)
T d1o98a2 5 VAL-IILDGFALRD 17 (275)
T ss_dssp EEE-EEETTCCCCS
T ss_pred EEE-EEECCCCCCC
Confidence 555 5559987543
No 11
>d2hsja1 c.23.10.3 (A:1-211) Uncharacterized protein SP1450 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=37.65 E-value=6.7 Score=27.10 Aligned_cols=34 Identities=32% Similarity=0.560 Sum_probs=20.7
Q ss_pred hhHHHHHHHHHHHHHHhccCCCCCCCCCCceEEEEeec
Q psy16427 21 KEFWYKDAQEGIRRRLALFGESHLPEDRAKNIILMVGD 58 (146)
Q Consensus 21 ~~~W~~~a~~~l~~~l~~~~~~~~~~~~aKNVIlfIGD 58 (146)
.+.|..+-++.++++.+... +.+.+++ + |+||||
T Consensus 6 ~~~w~~~~~~~~~~~~~~~~--~~~~~~~-~-ivf~GD 39 (211)
T d2hsja1 6 LENWLLKEQEKIQTKYRHLN--HISVVEP-N-ILFIGD 39 (211)
T ss_dssp HHHHHHHHHHHHHHHHHHHH--HHCSSCC-S-EEEEES
T ss_pred HHHHHHHHHHHHHHHHHHHh--hccCCCC-C-EEEEEC
Confidence 46798777888877765322 0123333 3 678999
No 12
>d1ei6a_ c.76.1.4 (A:) Phosphonoacetate hydrolase {Pseudomonas fluorescens [TaxId: 294]}
Probab=31.57 E-value=12 Score=26.20 Aligned_cols=19 Identities=16% Similarity=0.240 Sum_probs=14.5
Q ss_pred CceEEEEeecCCCHHHHHH
Q psy16427 49 AKNIILMVGDGMGLSTLTA 67 (146)
Q Consensus 49 aKNVIlfIGDGMG~~~vta 67 (146)
.|.||+++-|||....+..
T Consensus 15 ~~~vi~I~iD~l~~~~l~~ 33 (406)
T d1ei6a_ 15 SAPTIVICVDGCEQEYINQ 33 (406)
T ss_dssp SSCEEEEECTTCCHHHHHH
T ss_pred CCCEEEEEECCCCHHHHhc
Confidence 4557777779999988863
No 13
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=28.44 E-value=15 Score=27.52 Aligned_cols=44 Identities=18% Similarity=0.265 Sum_probs=28.9
Q ss_pred hHHHHHHHHHHHHHHhccCCCCCCCCCCceEEEEeec-CCCHHHH
Q psy16427 22 EFWYKDAQEGIRRRLALFGESHLPEDRAKNIILMVGD-GMGLSTL 65 (146)
Q Consensus 22 ~~W~~~a~~~l~~~l~~~~~~~~~~~~aKNVIlfIGD-GMG~~~v 65 (146)
=+|.+.|.+.|.+++......=.+..+|+.+++|+|- |.|=..+
T Consensus 24 viGQ~~a~~~v~~~v~~~~~~l~~~~~p~~~~lf~Gp~GvGKT~l 68 (315)
T d1r6bx3 24 VFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEV 68 (315)
T ss_dssp SCSCHHHHHHHHHHHHHHHTTCSCTTSCSEEEEEECSTTSSHHHH
T ss_pred ecChHHHHHHHHHHHHHHHccCCCCCCCceEEEEECCCcchhHHH
Confidence 3688889998888775221000145678988999985 7776433
No 14
>d1shux_ c.62.1.1 (X:) Capillary morphogenesis protein 2 domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.85 E-value=23 Score=23.41 Aligned_cols=17 Identities=24% Similarity=0.233 Sum_probs=12.8
Q ss_pred CCCCceEEEEeecCCCH
Q psy16427 46 EDRAKNIILMVGDGMGL 62 (146)
Q Consensus 46 ~~~aKNVIlfIGDGMG~ 62 (146)
+..++.+|++|.||-..
T Consensus 99 ~~~~~~~ivliTDG~~~ 115 (181)
T d1shux_ 99 GLKTSSIIIALTDGKLD 115 (181)
T ss_dssp GGGSCEEEEEEECCCCC
T ss_pred cCCCceEEEEecCCCCC
Confidence 34567889999999643
No 15
>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}
Probab=27.26 E-value=27 Score=21.06 Aligned_cols=23 Identities=26% Similarity=0.681 Sum_probs=17.8
Q ss_pred CceEEEEeecCCCHHHHHHHHHHhcc
Q psy16427 49 AKNIILMVGDGMGLSTLTASRILKGQ 74 (146)
Q Consensus 49 aKNVIlfIGDGMG~~~vtaAR~~~g~ 74 (146)
-|+|.++ |+|..-+++||++..+
T Consensus 5 ~K~v~Vi---GlG~sG~s~a~~L~~~ 27 (93)
T d2jfga1 5 GKNVVII---GLGLTGLSCVDFFLAR 27 (93)
T ss_dssp TCCEEEE---CCSHHHHHHHHHHHHT
T ss_pred CCEEEEE---eECHHHHHHHHHHHHC
Confidence 4566444 8999999999999864
No 16
>d1pvda3 c.36.1.9 (A:361-556) Pyruvate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=26.24 E-value=8.2 Score=27.06 Aligned_cols=24 Identities=25% Similarity=0.522 Sum_probs=16.4
Q ss_pred CCceEEEEeecC---CCHHHHHHHHHH
Q psy16427 48 RAKNIILMVGDG---MGLSTLTASRIL 71 (146)
Q Consensus 48 ~aKNVIlfIGDG---MG~~~vtaAR~~ 71 (146)
+.|.||.++||| |....+..+..+
T Consensus 74 p~~~Vv~i~GDGsf~m~~~eL~ta~~~ 100 (196)
T d1pvda3 74 PKKRVILFIGDGSLQLTVQEISTMIRW 100 (196)
T ss_dssp TTCCEEEEEEHHHHHHHGGGHHHHHHT
T ss_pred CCCceeeccCccccccccccccccccc
Confidence 467899999998 455555554444
No 17
>d1nija2 d.237.1.1 (A:224-318) Hypothetical protein YjiA, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=25.08 E-value=31 Score=21.19 Aligned_cols=20 Identities=10% Similarity=0.305 Sum_probs=17.1
Q ss_pred CCceEEEEeecCCCHHHHHH
Q psy16427 48 RAKNIILMVGDGMGLSTLTA 67 (146)
Q Consensus 48 ~aKNVIlfIGDGMG~~~vta 67 (146)
.+.|-++|||-||..+.+..
T Consensus 69 ~r~~~lVfIG~~Ld~~~l~~ 88 (95)
T d1nija2 69 KPHSTMVFIGIQLPEEEIRA 88 (95)
T ss_dssp CCCEEEEEEEESCCHHHHHH
T ss_pred CCCCEEEEEeCCCCHHHHHH
Confidence 46799999999999887765
No 18
>d1ns5a_ c.116.1.3 (A:) Hypothetical protein YbeA {Escherichia coli [TaxId: 562]}
Probab=24.77 E-value=13 Score=25.13 Aligned_cols=14 Identities=21% Similarity=0.809 Sum_probs=7.8
Q ss_pred ceEEEEee--cCCCHH
Q psy16427 50 KNIILMVG--DGMGLS 63 (146)
Q Consensus 50 KNVIlfIG--DGMG~~ 63 (146)
++|.|+|| ||.+..
T Consensus 96 ~~i~fiIGGa~G~~~~ 111 (153)
T d1ns5a_ 96 RDVSLLIGGPEGLSPA 111 (153)
T ss_dssp SCEEEEECBTTBCCHH
T ss_pred CcEEEEEEcCCCCCHH
Confidence 45666666 555543
No 19
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=23.52 E-value=24 Score=25.17 Aligned_cols=23 Identities=35% Similarity=0.606 Sum_probs=16.6
Q ss_pred CCCCCCCCceEEEEeec-CCCHHH
Q psy16427 42 SHLPEDRAKNIILMVGD-GMGLST 64 (146)
Q Consensus 42 ~~~~~~~aKNVIlfIGD-GMG~~~ 64 (146)
++++..+.+|||+|+|= |.|=.+
T Consensus 2 ~~lp~~~~~~vi~lvGp~GvGKTT 25 (207)
T d1ls1a2 2 ARLPVLKDRNLWFLVGLQGSGKTT 25 (207)
T ss_dssp CCCCCCCSSEEEEEECCTTTTHHH
T ss_pred CCCCCCCCCcEEEEECCCCCCHHH
Confidence 34566777899999996 666543
No 20
>d1y7pa1 c.23.1.7 (A:79-217) Hypothetical protein AF1403, C-terminal domain {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=23.26 E-value=5.9 Score=27.55 Aligned_cols=42 Identities=24% Similarity=0.499 Sum_probs=28.5
Q ss_pred EEEeecCCCHHHHHHHHHHhccccCCCCCcccccccCccceeeE
Q psy16427 53 ILMVGDGMGLSTLTASRILKGQRMGIHGEEYHLAWDKFPAVALA 96 (146)
Q Consensus 53 IlfIGDGMG~~~vtaAR~~~g~~~g~~g~~~~L~~d~fp~~Gl~ 96 (146)
|+.||+|--.+|+...-+-.....+--|| +...|.+|.+|-.
T Consensus 10 vIIiGgGaqVaqva~Gai~EADrHNirGE--rISVDtiplvGe~ 51 (139)
T d1y7pa1 10 VIILGGGALVSQVAIGAISEADRHNLRGE--RISVDTMPVVGEE 51 (139)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHHHTSC--CEEEEEEECCSHH
T ss_pred EEEECCcHHHHHHHHhhhhHhhhcccccc--eeEeeeeeeccHH
Confidence 44689999999998877665433222233 7888888877743
No 21
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}
Probab=22.09 E-value=89 Score=20.88 Aligned_cols=41 Identities=22% Similarity=0.404 Sum_probs=27.3
Q ss_pred CCCCCceEEEEeecCCCHHHHHHHHHHhccccCCCCCcccccccCcccee
Q psy16427 45 PEDRAKNIILMVGDGMGLSTLTASRILKGQRMGIHGEEYHLAWDKFPAVA 94 (146)
Q Consensus 45 ~~~~aKNVIlfIGDGMG~~~vtaAR~~~g~~~g~~g~~~~L~~d~fp~~G 94 (146)
....||.|++ || =|++-+++|..+... |. ..+.+|+-+..|
T Consensus 26 ~~~~pkkV~I-IG--aG~aGLsaA~~L~~~--G~----~V~vlE~~~~~G 66 (370)
T d2iida1 26 ATSNPKHVVI-VG--AGMAGLSAAYVLAGA--GH----QVTVLEASERPG 66 (370)
T ss_dssp CCSSCCEEEE-EC--CBHHHHHHHHHHHHH--TC----EEEEECSSSSSB
T ss_pred CCCCCCeEEE-EC--CCHHHHHHHHHHHHC--CC----CEEEEeCCCCCC
Confidence 3556777654 54 678899999888752 21 367778776655
No 22
>d1dqaa1 d.58.20.1 (A:587-703) NAD-binding domain of HMG-CoA reductase {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.03 E-value=37 Score=22.46 Aligned_cols=48 Identities=17% Similarity=0.361 Sum_probs=28.3
Q ss_pred hHHHH--HHHHHHHHHHhccCC-CCCC----CCCCceEE----EEeecCCCHHHHHHHH
Q psy16427 22 EFWYK--DAQEGIRRRLALFGE-SHLP----EDRAKNII----LMVGDGMGLSTLTASR 69 (146)
Q Consensus 22 ~~W~~--~a~~~l~~~l~~~~~-~~~~----~~~aKNVI----lfIGDGMG~~~vtaAR 69 (146)
..|-+ ...++|++.....++ .|+. .-.-.+|+ +.-||-||.+.+|-|-
T Consensus 20 ~~Wl~~~e~~~~ik~~~esTSr~~rL~~i~~~i~G~~v~lrF~~~TGDA~G~NMvT~at 78 (117)
T d1dqaa1 20 KAWLETSEGFAVIKEAFDSTSRFARLQKLHTSIAGRNLYIRFQSRSGDAMGMNMISKGT 78 (117)
T ss_dssp HHHHTSHHHHHHHHHHHHTTCSSEEEEEEEEEEETTEEEEEEEEEETTBCCHHHHHHHH
T ss_pred HHHHhChhhHHHHHHHHHccCccEEecccEEEEECCEEEEEEEEEccchhhchHHHHHH
Confidence 34884 456888877553320 0000 01234443 4679999999999875
No 23
>d2c42a2 c.36.1.12 (A:786-1232) Pyruvate-ferredoxin oxidoreductase, PFOR, domains VI {Desulfovibrio africanus [TaxId: 873]}
Probab=20.16 E-value=77 Score=25.48 Aligned_cols=21 Identities=29% Similarity=0.547 Sum_probs=17.0
Q ss_pred CCceEEEEeecC----CCHHHHHHH
Q psy16427 48 RAKNIILMVGDG----MGLSTLTAS 68 (146)
Q Consensus 48 ~aKNVIlfIGDG----MG~~~vtaA 68 (146)
..++||.|+||| .|.+.+.-|
T Consensus 168 ~k~~V~~~gGDG~~~dIG~~~L~~A 192 (447)
T d2c42a2 168 TKKSVWIFGGDGWAYDIGYGGLDHV 192 (447)
T ss_dssp SCCEEEEEEEHHHHHTTTHHHHHHH
T ss_pred cCCcEEEEecCccHhhcChHHHHHH
Confidence 458999999999 577777666
Done!