BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16430
(600 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 124/268 (46%), Positives = 158/268 (58%), Gaps = 24/268 (8%)
Query: 257 EIPFESISDLQWLGSGAQGAVFSGKLRSEIVAVKKVREQKETDI-----------RHLRK 305
EI F ++ + +G G G V+ + VAVK R + DI +
Sbjct: 3 EIDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAM 62
Query: 306 LNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYL 365
L HPNI+ +GVC + P C+VME+ GPL +L G+ +PP L NWA QIA GMNYL
Sbjct: 63 LKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLS-GKRIPPDILVNWAVQIARGMNYL 121
Query: 366 HSKQI---IHRDLKSPNVLIGSKEE--------AKISDFGTCREWNNKSTKMSFAGTVAW 414
H + I IHRDLKS N+LI K E KI+DFG REW+ ++TKMS AG AW
Sbjct: 122 HDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWH-RTTKMSAAGAYAW 180
Query: 415 MAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCP 474
MAPEVIR S D+WSYG++LWELLT E P++ +D A+ +GV + L LPIPSTCP
Sbjct: 181 MAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCP 240
Query: 475 DGFQLLMKMCWSNAPSSRPSFKQILSHL 502
+ F LM+ CW+ P SRPSF IL L
Sbjct: 241 EPFAKLMEDCWNPDPHSRPSFTNILDQL 268
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 181 SKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
S + KI+DFG REW+ ++TKMS AG AWMAPEVIR S D+W
Sbjct: 151 SNKILKITDFGLAREWH-RTTKMSAAGAYAWMAPEVIRASMFSKGSDVW 198
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/271 (36%), Positives = 154/271 (56%), Gaps = 15/271 (5%)
Query: 247 FKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEIVAVKKVREQK---------E 297
F+ + D+ +IP+ ++ + +G+G+ G V + VAVK + EQ
Sbjct: 23 FQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFL 82
Query: 298 TDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLL-KDG--EEVPPQRLYNW 354
++ +++L HPNIV F G TQ P IV EY + G LY LL K G E++ +R +
Sbjct: 83 REVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSM 142
Query: 355 ARQIAAGMNYLHSKQ--IIHRDLKSPNVLIGSKEEAKISDFGTCR-EWNNKSTKMSFAGT 411
A +A GMNYLH++ I+HR+LKSPN+L+ K K+ DFG R + + + S AGT
Sbjct: 143 AYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGT 202
Query: 412 VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPS 471
WMAPEV+R+E ++K D++S+G++LWEL T + P+ +++ + ++ VG L IP
Sbjct: 203 PEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPR 262
Query: 472 TCPDGFQLLMKMCWSNAPSSRPSFKQILSHL 502
+++ CW+N P RPSF I+ L
Sbjct: 263 NLNPQVAAIIEGCWTNEPWKRPSFATIMDLL 293
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 177 VLIGSKEEAKISDFGTCR-EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ K K+ DFG R + + + S AGT WMAPEV+R+E ++K D++
Sbjct: 170 LLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVY 223
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/271 (36%), Positives = 152/271 (56%), Gaps = 15/271 (5%)
Query: 247 FKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEIVAVKKVREQK---------E 297
F+ + D+ +IP+ ++ + +G+G+ G V + VAVK + EQ
Sbjct: 23 FQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFL 82
Query: 298 TDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLL-KDG--EEVPPQRLYNW 354
++ +++L HPNIV F G TQ P IV EY + G LY LL K G E++ +R +
Sbjct: 83 REVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSM 142
Query: 355 ARQIAAGMNYLHSKQ--IIHRDLKSPNVLIGSKEEAKISDFGTCR-EWNNKSTKMSFAGT 411
A +A GMNYLH++ I+HRDLKSPN+L+ K K+ DFG R + + AGT
Sbjct: 143 AYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGT 202
Query: 412 VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPS 471
WMAPEV+R+E ++K D++S+G++LWEL T + P+ +++ + ++ VG L IP
Sbjct: 203 PEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPR 262
Query: 472 TCPDGFQLLMKMCWSNAPSSRPSFKQILSHL 502
+++ CW+N P RPSF I+ L
Sbjct: 263 NLNPQVAAIIEGCWTNEPWKRPSFATIMDLL 293
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 177 VLIGSKEEAKISDFGTCR-EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ K K+ DFG R + + AGT WMAPEV+R+E ++K D++
Sbjct: 170 LLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVY 223
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 142/262 (54%), Gaps = 22/262 (8%)
Query: 258 IPFESISDLQWLGSGAQGAVFSGKLRSEIVAVKKVREQKE-----TDIRHLRKLNHPNIV 312
I ++ I + +G GA G V K R++ VA+K++ + E ++R L ++NHPNIV
Sbjct: 6 IDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIV 65
Query: 313 KFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVP---PQRLYNWARQIAAGMNYLHSKQ 369
K G C C+VMEY G LYN+L E +P +W Q + G+ YLHS Q
Sbjct: 66 KLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQ 123
Query: 370 ---IIHRDLKSPNVL-IGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQC 425
+IHRDLK PN+L + KI DFGT + T G+ AWMAPEV
Sbjct: 124 PKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK--GSAAWMAPEVFEGSNY 181
Query: 426 SDKIDIWSYGIVLWELLTCETPYKDVDSSA--IIWGVGSSSLHLPIPSTCPDGFQLLMKM 483
S+K D++S+GI+LWE++T P+ ++ A I+W V + + P+ P + LM
Sbjct: 182 SEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGT-RPPLIKNLPKPIESLMTR 240
Query: 484 CWSNAPSSRPSFKQ---ILSHL 502
CWS PS RPS ++ I++HL
Sbjct: 241 CWSKDPSQRPSMEEIVKIMTHL 262
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ KI DFGT + T G+ AWMAPEV S+K D++
Sbjct: 138 LLVAGGTVLKICDFGTACDIQTHMTNNK--GSAAWMAPEVFEGSNYSEKCDVF 188
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 142/262 (54%), Gaps = 22/262 (8%)
Query: 258 IPFESISDLQWLGSGAQGAVFSGKLRSEIVAVKKVREQKE-----TDIRHLRKLNHPNIV 312
I ++ I + +G GA G V K R++ VA+K++ + E ++R L ++NHPNIV
Sbjct: 5 IDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIV 64
Query: 313 KFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVP---PQRLYNWARQIAAGMNYLHSKQ 369
K G C C+VMEY G LYN+L E +P +W Q + G+ YLHS Q
Sbjct: 65 KLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQ 122
Query: 370 ---IIHRDLKSPNVL-IGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQC 425
+IHRDLK PN+L + KI DFGT + T G+ AWMAPEV
Sbjct: 123 PKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK--GSAAWMAPEVFEGSNY 180
Query: 426 SDKIDIWSYGIVLWELLTCETPYKDVDSSA--IIWGVGSSSLHLPIPSTCPDGFQLLMKM 483
S+K D++S+GI+LWE++T P+ ++ A I+W V + + P+ P + LM
Sbjct: 181 SEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGT-RPPLIKNLPKPIESLMTR 239
Query: 484 CWSNAPSSRPSFKQ---ILSHL 502
CWS PS RPS ++ I++HL
Sbjct: 240 CWSKDPSQRPSMEEIVKIMTHL 261
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ KI DFGT + T G+ AWMAPEV S+K D++
Sbjct: 137 LLVAGGTVLKICDFGTACDIQTHMTNNK--GSAAWMAPEVFEGSNYSEKCDVF 187
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/275 (37%), Positives = 149/275 (54%), Gaps = 22/275 (8%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSGKLRSEIVAVKKVREQKET---------DIRHLR 304
D+WEIP I+ Q +GSG+ G V+ GK + VAVK + T ++ LR
Sbjct: 17 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLR 75
Query: 305 KLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGE-EVPPQRLYNWARQIAAGMN 363
K H NI+ F G T AP IV ++C LY+ L E + ++L + ARQ A GM+
Sbjct: 76 KTRHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMD 134
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCRE---WNNKSTKMSFAGTVAWMAPEVI 420
YLH+K IIHRDLKS N+ + KI DFG E W+ +G++ WMAPEVI
Sbjct: 135 YLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 194
Query: 421 RNEQC---SDKIDIWSYGIVLWELLTCETPYKDVDS-SAIIWGVGSSSLH---LPIPSTC 473
R + S + D++++GIVL+EL+T + PY ++++ II VG SL + S C
Sbjct: 195 RMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNC 254
Query: 474 PDGFQLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
P + LM C RPSF +IL+ ++ ++E
Sbjct: 255 PKRMKRLMAECLKKKRDERPSFPRILAEIEELARE 289
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Query: 177 VLIGSKEEAKISDFGTCRE---WNNKSTKMSFAGTVAWMAPEVIR 218
+ + KI DFG E W+ +G++ WMAPEVIR
Sbjct: 151 IFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 195
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 102/276 (36%), Positives = 150/276 (54%), Gaps = 22/276 (7%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSGKLRSEIVAVKKVREQKET---------DIRHLR 304
D+WEIP I+ Q +GSG+ G V+ GK + VAVK + T ++ LR
Sbjct: 17 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLR 75
Query: 305 KLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGE-EVPPQRLYNWARQIAAGMN 363
K H NI+ F G T+ P IV ++C LY+ L E + ++L + ARQ A GM+
Sbjct: 76 KTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMD 134
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCRE---WNNKSTKMSFAGTVAWMAPEVI 420
YLH+K IIHRDLKS N+ + KI DFG E W+ +G++ WMAPEVI
Sbjct: 135 YLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 194
Query: 421 RNEQC---SDKIDIWSYGIVLWELLTCETPYKDVDS-SAIIWGVGSSSLH---LPIPSTC 473
R + S + D++++GIVL+EL+T + PY ++++ II VG SL + S C
Sbjct: 195 RMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNC 254
Query: 474 PDGFQLLMKMCWSNAPSSRPSFKQILSHLDIASQEV 509
P + LM C RPSF +IL+ ++ ++E+
Sbjct: 255 PKRMKRLMAECLKKKRDERPSFPRILAEIEELAREL 290
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Query: 177 VLIGSKEEAKISDFGTCRE---WNNKSTKMSFAGTVAWMAPEVIR 218
+ + KI DFG E W+ +G++ WMAPEVIR
Sbjct: 151 IFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 195
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/276 (36%), Positives = 149/276 (53%), Gaps = 22/276 (7%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSGKLRSEIVAVKKVREQKET---------DIRHLR 304
D+WEIP I+ Q +GSG+ G V+ GK + VAVK + T ++ LR
Sbjct: 5 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLR 63
Query: 305 KLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGE-EVPPQRLYNWARQIAAGMN 363
K H NI+ F G T+ P IV ++C LY+ L E + ++L + ARQ A GM+
Sbjct: 64 KTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMD 122
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTC---REWNNKSTKMSFAGTVAWMAPEVI 420
YLH+K IIHRDLKS N+ + KI DFG W+ +G++ WMAPEVI
Sbjct: 123 YLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 182
Query: 421 RNEQC---SDKIDIWSYGIVLWELLTCETPYKDVDS-SAIIWGVGSSSLH---LPIPSTC 473
R + S + D++++GIVL+EL+T + PY ++++ II VG SL + S C
Sbjct: 183 RMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNC 242
Query: 474 PDGFQLLMKMCWSNAPSSRPSFKQILSHLDIASQEV 509
P + LM C RPSF +IL+ ++ ++E+
Sbjct: 243 PKRMKRLMAECLKKKRDERPSFPRILAEIEELAREL 278
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Query: 177 VLIGSKEEAKISDFGTC---REWNNKSTKMSFAGTVAWMAPEVIR 218
+ + KI DFG W+ +G++ WMAPEVIR
Sbjct: 139 IFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 183
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 101/280 (36%), Positives = 150/280 (53%), Gaps = 22/280 (7%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSGKLRSEIVAVKKVREQKET---------DIRHLR 304
D+WEIP I+ Q +GSG+ G V+ GK + VAVK + T ++ LR
Sbjct: 29 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLR 87
Query: 305 KLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGE-EVPPQRLYNWARQIAAGMN 363
K H NI+ F G T+ P IV ++C LY+ L E + +L + ARQ A GM+
Sbjct: 88 KTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMD 146
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCRE---WNNKSTKMSFAGTVAWMAPEVI 420
YLH+K IIHRDLKS N+ + KI DFG E W+ +G++ WMAPEVI
Sbjct: 147 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 206
Query: 421 RNEQ---CSDKIDIWSYGIVLWELLTCETPYKDVDS-SAIIWGVGSSSLH---LPIPSTC 473
R + S + D++++GIVL+EL+T + PY ++++ II+ VG L + S C
Sbjct: 207 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 266
Query: 474 PDGFQLLMKMCWSNAPSSRPSFKQILSHLDIASQEVLRIQ 513
P + LM C RP F QIL+ +++ ++ + +I
Sbjct: 267 PKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPKIH 306
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Query: 185 AKISDFGTCRE---WNNKSTKMSFAGTVAWMAPEVIR 218
KI DFG E W+ +G++ WMAPEVIR
Sbjct: 171 VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 207
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 101/280 (36%), Positives = 150/280 (53%), Gaps = 22/280 (7%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSGKLRSEIVAVKKVREQKET---------DIRHLR 304
D+WEIP I+ Q +GSG+ G V+ GK + VAVK + T ++ LR
Sbjct: 21 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLR 79
Query: 305 KLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGE-EVPPQRLYNWARQIAAGMN 363
K H NI+ F G T+ P IV ++C LY+ L E + +L + ARQ A GM+
Sbjct: 80 KTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMD 138
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCRE---WNNKSTKMSFAGTVAWMAPEVI 420
YLH+K IIHRDLKS N+ + KI DFG E W+ +G++ WMAPEVI
Sbjct: 139 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 198
Query: 421 RNEQ---CSDKIDIWSYGIVLWELLTCETPYKDVDS-SAIIWGVGSSSLH---LPIPSTC 473
R + S + D++++GIVL+EL+T + PY ++++ II+ VG L + S C
Sbjct: 199 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 258
Query: 474 PDGFQLLMKMCWSNAPSSRPSFKQILSHLDIASQEVLRIQ 513
P + LM C RP F QIL+ +++ ++ + +I
Sbjct: 259 PKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPKIH 298
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Query: 185 AKISDFGTCRE---WNNKSTKMSFAGTVAWMAPEVIR 218
KI DFG E W+ +G++ WMAPEVIR
Sbjct: 163 VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 199
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 99/267 (37%), Positives = 134/267 (50%), Gaps = 16/267 (5%)
Query: 251 VLRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSE--IVAVKKVREQKETDI-------- 300
V +D+W + E + + +G G G VFSG+LR++ +VAVK RE D+
Sbjct: 104 VPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEA 163
Query: 301 RHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK-DGEEVPPQRLYNWARQIA 359
R L++ +HPNIV+ GVCTQ IVME G L+ +G + + L A
Sbjct: 164 RILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAA 223
Query: 360 AGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFA---GTVAWMA 416
AGM YL SK IHRDL + N L+ K KISDFG RE + S V W A
Sbjct: 224 AGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTA 283
Query: 417 PEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDVDSSAIIWGVGSSSLHLPIPSTCPD 475
PE + + S + D+WS+GI+LWE + +PY ++ + V LP P CPD
Sbjct: 284 PEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGG-RLPCPELCPD 342
Query: 476 GFQLLMKMCWSNAPSSRPSFKQILSHL 502
LM+ CW+ P RPSF I L
Sbjct: 343 AVFRLMEQCWAYEPGQRPSFSTIYQEL 369
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Query: 178 LIGSKEEAKISDFGTCREWNNKSTKMSFA---GTVAWMAPEVIRNEQCSDKIDIW 229
L+ K KISDFG RE + S V W APE + + S + D+W
Sbjct: 245 LVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVW 299
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 99/267 (37%), Positives = 134/267 (50%), Gaps = 16/267 (5%)
Query: 251 VLRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSE--IVAVKKVREQKETDI-------- 300
V +D+W + E + + +G G G VFSG+LR++ +VAVK RE D+
Sbjct: 104 VPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEA 163
Query: 301 RHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK-DGEEVPPQRLYNWARQIA 359
R L++ +HPNIV+ GVCTQ IVME G L+ +G + + L A
Sbjct: 164 RILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAA 223
Query: 360 AGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFA---GTVAWMA 416
AGM YL SK IHRDL + N L+ K KISDFG RE + S V W A
Sbjct: 224 AGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTA 283
Query: 417 PEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDVDSSAIIWGVGSSSLHLPIPSTCPD 475
PE + + S + D+WS+GI+LWE + +PY ++ + V LP P CPD
Sbjct: 284 PEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGG-RLPCPELCPD 342
Query: 476 GFQLLMKMCWSNAPSSRPSFKQILSHL 502
LM+ CW+ P RPSF I L
Sbjct: 343 AVFRLMEQCWAYEPGQRPSFSTIYQEL 369
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Query: 178 LIGSKEEAKISDFGTCREWNNKSTKMSFA---GTVAWMAPEVIRNEQCSDKIDIW 229
L+ K KISDFG RE + S V W APE + + S + D+W
Sbjct: 245 LVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVW 299
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/276 (36%), Positives = 148/276 (53%), Gaps = 22/276 (7%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSGKLRSEIVAVKKVREQKET---------DIRHLR 304
D+WEIP I+ Q +GSG+ G V+ GK + VAVK + T ++ LR
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLR 59
Query: 305 KLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGE-EVPPQRLYNWARQIAAGMN 363
K H NI+ F G T+ P IV ++C LY+ L E + +L + ARQ A GM+
Sbjct: 60 KTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMD 118
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCRE---WNNKSTKMSFAGTVAWMAPEVI 420
YLH+K IIHRDLKS N+ + KI DFG E W+ +G++ WMAPEVI
Sbjct: 119 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 178
Query: 421 RNEQ---CSDKIDIWSYGIVLWELLTCETPYKDVDS-SAIIWGVGSSSLH---LPIPSTC 473
R + S + D++++GIVL+EL+T + PY ++++ II+ VG L + S C
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 238
Query: 474 PDGFQLLMKMCWSNAPSSRPSFKQILSHLDIASQEV 509
P + LM C RP F QIL+ +++ ++ +
Sbjct: 239 PKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 274
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Query: 185 AKISDFGTCRE---WNNKSTKMSFAGTVAWMAPEVIR 218
KI DFG E W+ +G++ WMAPEVIR
Sbjct: 143 VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 179
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/280 (35%), Positives = 149/280 (53%), Gaps = 22/280 (7%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSGKLRSEIVAVKKVREQKET---------DIRHLR 304
D+WEIP I+ Q +GSG+ G V+ GK + VAVK + T ++ LR
Sbjct: 28 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLR 86
Query: 305 KLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGE-EVPPQRLYNWARQIAAGMN 363
K H NI+ F G T+ P IV ++C LY+ L E + +L + ARQ A GM+
Sbjct: 87 KTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMD 145
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTC---REWNNKSTKMSFAGTVAWMAPEVI 420
YLH+K IIHRDLKS N+ + KI DFG W+ +G++ WMAPEVI
Sbjct: 146 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 205
Query: 421 RNEQ---CSDKIDIWSYGIVLWELLTCETPYKDVDS-SAIIWGVGSSSLH---LPIPSTC 473
R + S + D++++GIVL+EL+T + PY ++++ II+ VG L + S C
Sbjct: 206 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 265
Query: 474 PDGFQLLMKMCWSNAPSSRPSFKQILSHLDIASQEVLRIQ 513
P + LM C RP F QIL+ +++ ++ + +I
Sbjct: 266 PKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPKIH 305
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Query: 185 AKISDFGTC---REWNNKSTKMSFAGTVAWMAPEVIR 218
KI DFG W+ +G++ WMAPEVIR
Sbjct: 170 VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 206
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/280 (35%), Positives = 149/280 (53%), Gaps = 22/280 (7%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSGKLRSEIVAVKKVREQKET---------DIRHLR 304
D+WEIP I+ Q +GSG+ G V+ GK + VAVK + T ++ LR
Sbjct: 29 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLR 87
Query: 305 KLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGE-EVPPQRLYNWARQIAAGMN 363
K H NI+ F G T+ P IV ++C LY+ L E + +L + ARQ A GM+
Sbjct: 88 KTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMD 146
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTC---REWNNKSTKMSFAGTVAWMAPEVI 420
YLH+K IIHRDLKS N+ + KI DFG W+ +G++ WMAPEVI
Sbjct: 147 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 206
Query: 421 RNEQ---CSDKIDIWSYGIVLWELLTCETPYKDVDS-SAIIWGVGSSSLH---LPIPSTC 473
R + S + D++++GIVL+EL+T + PY ++++ II+ VG L + S C
Sbjct: 207 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 266
Query: 474 PDGFQLLMKMCWSNAPSSRPSFKQILSHLDIASQEVLRIQ 513
P + LM C RP F QIL+ +++ ++ + +I
Sbjct: 267 PKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPKIH 306
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Query: 185 AKISDFGTC---REWNNKSTKMSFAGTVAWMAPEVIR 218
KI DFG W+ +G++ WMAPEVIR
Sbjct: 171 VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 207
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/276 (36%), Positives = 147/276 (53%), Gaps = 22/276 (7%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSGKLRSEIVAVKKVREQKET---------DIRHLR 304
D+WEIP I+ Q +GSG+ G V+ GK + VAVK + T ++ LR
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLR 59
Query: 305 KLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGE-EVPPQRLYNWARQIAAGMN 363
K H NI+ F G T AP IV ++C LY+ L E + +L + ARQ A GM+
Sbjct: 60 KTRHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMD 118
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTC---REWNNKSTKMSFAGTVAWMAPEVI 420
YLH+K IIHRDLKS N+ + KI DFG W+ +G++ WMAPEVI
Sbjct: 119 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 178
Query: 421 RNEQ---CSDKIDIWSYGIVLWELLTCETPYKDVDS-SAIIWGVGSSSLH---LPIPSTC 473
R + S + D++++GIVL+EL+T + PY ++++ II+ VG L + S C
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 238
Query: 474 PDGFQLLMKMCWSNAPSSRPSFKQILSHLDIASQEV 509
P + LM C RP F QIL+ +++ ++ +
Sbjct: 239 PKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 274
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Query: 185 AKISDFGTC---REWNNKSTKMSFAGTVAWMAPEVIR 218
KI DFG W+ +G++ WMAPEVIR
Sbjct: 143 VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/280 (35%), Positives = 149/280 (53%), Gaps = 22/280 (7%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSGKLRSEIVAVKKVREQKET---------DIRHLR 304
D+WEIP I+ Q +GSG+ G V+ GK + VAVK + T ++ LR
Sbjct: 3 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLR 61
Query: 305 KLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGE-EVPPQRLYNWARQIAAGMN 363
K H NI+ F G T+ P IV ++C LY+ L E + +L + ARQ A GM+
Sbjct: 62 KTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMD 120
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTC---REWNNKSTKMSFAGTVAWMAPEVI 420
YLH+K IIHRDLKS N+ + KI DFG W+ +G++ WMAPEVI
Sbjct: 121 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 180
Query: 421 RNEQ---CSDKIDIWSYGIVLWELLTCETPYKDVDS-SAIIWGVGSSSLH---LPIPSTC 473
R + S + D++++GIVL+EL+T + PY ++++ II+ VG L + S C
Sbjct: 181 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 240
Query: 474 PDGFQLLMKMCWSNAPSSRPSFKQILSHLDIASQEVLRIQ 513
P + LM C RP F QIL+ +++ ++ + +I
Sbjct: 241 PKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPKIH 280
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Query: 185 AKISDFGTC---REWNNKSTKMSFAGTVAWMAPEVIR 218
KI DFG W+ +G++ WMAPEVIR
Sbjct: 145 VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 181
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/280 (35%), Positives = 149/280 (53%), Gaps = 22/280 (7%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSGKLRSEIVAVKKVREQKET---------DIRHLR 304
D+WEIP I+ Q +GSG+ G V+ GK + VAVK + T ++ LR
Sbjct: 6 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLR 64
Query: 305 KLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGE-EVPPQRLYNWARQIAAGMN 363
K H NI+ F G T+ P IV ++C LY+ L E + +L + ARQ A GM+
Sbjct: 65 KTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMD 123
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTC---REWNNKSTKMSFAGTVAWMAPEVI 420
YLH+K IIHRDLKS N+ + KI DFG W+ +G++ WMAPEVI
Sbjct: 124 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 183
Query: 421 RNEQ---CSDKIDIWSYGIVLWELLTCETPYKDVDS-SAIIWGVGSSSLH---LPIPSTC 473
R + S + D++++GIVL+EL+T + PY ++++ II+ VG L + S C
Sbjct: 184 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 243
Query: 474 PDGFQLLMKMCWSNAPSSRPSFKQILSHLDIASQEVLRIQ 513
P + LM C RP F QIL+ +++ ++ + +I
Sbjct: 244 PKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPKIH 283
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Query: 185 AKISDFGTC---REWNNKSTKMSFAGTVAWMAPEVIR 218
KI DFG W+ +G++ WMAPEVIR
Sbjct: 148 VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 184
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 99/276 (35%), Positives = 147/276 (53%), Gaps = 22/276 (7%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSGKLRSEIVAVKKVREQKET---------DIRHLR 304
D+WEIP I+ Q +GSG+ G V+ GK + VAVK + T ++ LR
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLR 59
Query: 305 KLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGE-EVPPQRLYNWARQIAAGMN 363
K H NI+ F G T+ P IV ++C LY+ L E + +L + ARQ A GM+
Sbjct: 60 KTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMD 118
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTC---REWNNKSTKMSFAGTVAWMAPEVI 420
YLH+K IIHRDLKS N+ + KI DFG W+ +G++ WMAPEVI
Sbjct: 119 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 178
Query: 421 RNEQ---CSDKIDIWSYGIVLWELLTCETPYKDVDS-SAIIWGVGSSSLH---LPIPSTC 473
R + S + D++++GIVL+EL+T + PY ++++ II+ VG L + S C
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 238
Query: 474 PDGFQLLMKMCWSNAPSSRPSFKQILSHLDIASQEV 509
P + LM C RP F QIL+ +++ ++ +
Sbjct: 239 PKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 274
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Query: 185 AKISDFGTC---REWNNKSTKMSFAGTVAWMAPEVIR 218
KI DFG W+ +G++ WMAPEVIR
Sbjct: 143 VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 99/276 (35%), Positives = 147/276 (53%), Gaps = 22/276 (7%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSGKLRSEIVAVKKVREQKET---------DIRHLR 304
D+WEIP I+ Q +GSG+ G V+ GK + VAVK + T ++ LR
Sbjct: 6 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLR 64
Query: 305 KLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGE-EVPPQRLYNWARQIAAGMN 363
K H NI+ F G T+ P IV ++C LY+ L E + +L + ARQ A GM+
Sbjct: 65 KTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMD 123
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTC---REWNNKSTKMSFAGTVAWMAPEVI 420
YLH+K IIHRDLKS N+ + KI DFG W+ +G++ WMAPEVI
Sbjct: 124 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 183
Query: 421 RNEQ---CSDKIDIWSYGIVLWELLTCETPYKDVDS-SAIIWGVGSSSLH---LPIPSTC 473
R + S + D++++GIVL+EL+T + PY ++++ II+ VG L + S C
Sbjct: 184 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 243
Query: 474 PDGFQLLMKMCWSNAPSSRPSFKQILSHLDIASQEV 509
P + LM C RP F QIL+ +++ ++ +
Sbjct: 244 PKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 279
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Query: 185 AKISDFGTC---REWNNKSTKMSFAGTVAWMAPEVIR 218
KI DFG W+ +G++ WMAPEVIR
Sbjct: 148 VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 184
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 141/271 (52%), Gaps = 20/271 (7%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQ--------KETDIRHL 303
D+WE+ I+ LG G G V+ G K S VAVK ++E KE + +
Sbjct: 4 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV--M 61
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAG 361
+++ HPN+V+ GVCT+ P + I++E+ YG L + L+ + +EV L A QI++
Sbjct: 62 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 121
Query: 362 MNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPE 418
M YL K IHRDL + N L+G K++DFG R T + AG + W APE
Sbjct: 122 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPE 180
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
+ + S K D+W++G++LWE+ T +PY +D S ++ + + P CP+
Sbjct: 181 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ-VYELLEKDYRMERPEGCPEKV 239
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
LM+ CW PS RPSF +I + QE
Sbjct: 240 YELMRACWQWNPSDRPSFAEIHQAFETMFQE 270
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 178 LIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIW 229
L+G K++DFG R T + AG + W APE + + S K D+W
Sbjct: 141 LVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 194
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 141/271 (52%), Gaps = 20/271 (7%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQ--------KETDIRHL 303
D+WE+ I+ LG G G V+ G K S VAVK ++E KE + +
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV--M 63
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAG 361
+++ HPN+V+ GVCT+ P + I++E+ YG L + L+ + +EV L A QI++
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 362 MNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPE 418
M YL K IHRDL + N L+G K++DFG R T + AG + W APE
Sbjct: 124 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPE 182
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
+ + S K D+W++G++LWE+ T +PY +D S ++ + + P CP+
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMERPEGCPEKV 241
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
LM+ CW PS RPSF +I + QE
Sbjct: 242 YELMRACWQWNPSDRPSFAEIHQAFETMFQE 272
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 178 LIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIW 229
L+G K++DFG R T + AG + W APE + + S K D+W
Sbjct: 143 LVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 141/271 (52%), Gaps = 20/271 (7%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQ--------KETDIRHL 303
D+WE+ I+ LG G G V+ G K S VAVK ++E KE + +
Sbjct: 7 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV--M 64
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAG 361
+++ HPN+V+ GVCT+ P + I++E+ YG L + L+ + +EV L A QI++
Sbjct: 65 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 124
Query: 362 MNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPE 418
M YL K IHRDL + N L+G K++DFG R T + AG + W APE
Sbjct: 125 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPE 183
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
+ + S K D+W++G++LWE+ T +PY +D S ++ + + P CP+
Sbjct: 184 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMERPEGCPEKV 242
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
LM+ CW PS RPSF +I + QE
Sbjct: 243 YELMRACWQWNPSDRPSFAEIHQAFETMFQE 273
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 178 LIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIW 229
L+G K++DFG R T + AG + W APE + + S K D+W
Sbjct: 144 LVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 197
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 141/271 (52%), Gaps = 20/271 (7%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQ--------KETDIRHL 303
D+WE+ I+ LG G G V+ G K S VAVK ++E KE + +
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV--M 63
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAG 361
+++ HPN+V+ GVCT+ P + I++E+ YG L + L+ + +EV L A QI++
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 362 MNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPE 418
M YL K IHRDL + N L+G K++DFG R T + AG + W APE
Sbjct: 124 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPE 182
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
+ + S K D+W++G++LWE+ T +PY +D S ++ + + P CP+
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMERPEGCPEKV 241
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
LM+ CW PS RPSF +I + QE
Sbjct: 242 YELMRACWQWNPSDRPSFAEIHQAFETMFQE 272
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 178 LIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIW 229
L+G K++DFG R T + AG + W APE + + S K D+W
Sbjct: 143 LVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 20/271 (7%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQ--------KETDIRHL 303
D+WE+ I+ LG G G V+ G K S VAVK ++E KE + +
Sbjct: 4 DKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV--M 61
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAG 361
+++ HPN+V+ GVCT+ P + I+ E+ YG L + L+ + +EV L A QI++
Sbjct: 62 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 121
Query: 362 MNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPE 418
M YL K IHRDL + N L+G K++DFG R T + AG + W APE
Sbjct: 122 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPE 180
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
+ + S K D+W++G++LWE+ T +PY +D S ++ + + P CP+
Sbjct: 181 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ-VYELLEKDYRMERPEGCPEKV 239
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
LM+ CW PS RPSF +I + QE
Sbjct: 240 YELMRACWQWNPSDRPSFAEIHQAFETMFQE 270
Score = 32.0 bits (71), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 178 LIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIW 229
L+G K++DFG R T + AG + W APE + + S K D+W
Sbjct: 141 LVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 194
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 20/271 (7%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQ--------KETDIRHL 303
D+WE+ I+ LG G G V+ G K S VAVK ++E KE + +
Sbjct: 4 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV--M 61
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAG 361
+++ HPN+V+ GVCT+ P + I+ E+ YG L + L+ + +EV L A QI++
Sbjct: 62 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 121
Query: 362 MNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPE 418
M YL K IHRDL + N L+G K++DFG R T + AG + W APE
Sbjct: 122 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTFTAHAGAKFPIKWTAPE 180
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
+ + S K D+W++G++LWE+ T +PY +D S ++ + + P CP+
Sbjct: 181 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ-VYELLEKDYRMERPEGCPEKV 239
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
LM+ CW PS RPSF +I + QE
Sbjct: 240 YELMRACWQWNPSDRPSFAEIHQAFETMFQE 270
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 178 LIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIW 229
L+G K++DFG R T + AG + W APE + + S K D+W
Sbjct: 141 LVGENHLVKVADFGLSRLMTG-DTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 194
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 20/271 (7%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQ--------KETDIRHL 303
D+WE+ I+ LG G G V+ G K S VAVK ++E KE + +
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV--M 63
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAG 361
+++ HPN+V+ GVCT+ P + I+ E+ YG L + L+ + +EV L A QI++
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 362 MNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPE 418
M YL K IHRDL + N L+G K++DFG R T + AG + W APE
Sbjct: 124 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPE 182
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
+ + S K D+W++G++LWE+ T +PY +D S ++ + + P CP+
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMERPEGCPEKV 241
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
LM+ CW PS RPSF +I + QE
Sbjct: 242 YELMRACWQWNPSDRPSFAEIHQAFETMFQE 272
Score = 32.0 bits (71), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 178 LIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIW 229
L+G K++DFG R T + AG + W APE + + S K D+W
Sbjct: 143 LVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 141/271 (52%), Gaps = 20/271 (7%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQ--------KETDIRHL 303
D+WE+ I+ LG G G V+ G K S VAVK ++E KE + +
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV--M 68
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAG 361
+++ HPN+V+ GVCT+ P + I++E+ YG L + L+ + +EV L A QI++
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 128
Query: 362 MNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPE 418
M YL K IHRDL + N L+G K++DFG R T + AG + W APE
Sbjct: 129 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPE 187
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
+ + S K D+W++G++LWE+ T +PY +D S ++ + + P CP+
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMERPEGCPEKV 246
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
LM+ CW PS RPSF +I + QE
Sbjct: 247 YELMRACWQWNPSDRPSFAEIHQAFETMFQE 277
Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 178 LIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIW 229
L+G K++DFG R T + AG + W APE + + S K D+W
Sbjct: 148 LVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 201
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 20/271 (7%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQ--------KETDIRHL 303
D+WE+ I+ LG G G V+ G K S VAVK ++E KE + +
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV--M 63
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAG 361
+++ HPN+V+ GVCT+ P + I+ E+ YG L + L+ + +EV L A QI++
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 362 MNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPE 418
M YL K IHRDL + N L+G K++DFG R T + AG + W APE
Sbjct: 124 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPE 182
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
+ + S K D+W++G++LWE+ T +PY +D S ++ + + P CP+
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMERPEGCPEKV 241
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
LM+ CW PS RPSF +I + QE
Sbjct: 242 YELMRACWQWNPSDRPSFAEIHQAFETMFQE 272
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 178 LIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIW 229
L+G K++DFG R T + AG + W APE + + S K D+W
Sbjct: 143 LVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 20/271 (7%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQ--------KETDIRHL 303
D+WE+ I+ LG G G V+ G K S VAVK ++E KE + +
Sbjct: 19 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV--M 76
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAG 361
+++ HPN+V+ GVCT+ P + I+ E+ YG L + L+ + +EV L A QI++
Sbjct: 77 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 136
Query: 362 MNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPE 418
M YL K IHRDL + N L+G K++DFG R T + AG + W APE
Sbjct: 137 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPE 195
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
+ + S K D+W++G++LWE+ T +PY +D S ++ + + P CP+
Sbjct: 196 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMERPEGCPEKV 254
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
LM+ CW PS RPSF +I + QE
Sbjct: 255 YELMRACWQWNPSDRPSFAEIHQAFETMFQE 285
Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 178 LIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIW 229
L+G K++DFG R T + AG + W APE + + S K D+W
Sbjct: 156 LVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 209
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 20/271 (7%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQ--------KETDIRHL 303
D+WE+ I+ LG G G V+ G K S VAVK ++E KE + +
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV--M 68
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAG 361
+++ HPN+V+ GVCT+ P + I+ E+ YG L + L+ + +EV L A QI++
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 128
Query: 362 MNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPE 418
M YL K IHRDL + N L+G K++DFG R T + AG + W APE
Sbjct: 129 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPE 187
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
+ + S K D+W++G++LWE+ T +PY +D S ++ + + P CP+
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMERPEGCPEKV 246
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
LM+ CW PS RPSF +I + QE
Sbjct: 247 YELMRACWQWNPSDRPSFAEIHQAFETMFQE 277
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 178 LIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIW 229
L+G K++DFG R T + AG + W APE + + S K D+W
Sbjct: 148 LVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 201
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 20/271 (7%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQ--------KETDIRHL 303
D+WE+ I+ LG G G V+ G K S VAVK ++E KE + +
Sbjct: 8 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV--M 65
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAG 361
+++ HPN+V+ GVCT+ P + I+ E+ YG L + L+ + +EV L A QI++
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 125
Query: 362 MNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPE 418
M YL K IHRDL + N L+G K++DFG R T + AG + W APE
Sbjct: 126 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPE 184
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
+ + S K D+W++G++LWE+ T +PY +D S ++ + + P CP+
Sbjct: 185 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMERPEGCPEKV 243
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
LM+ CW PS RPSF +I + QE
Sbjct: 244 YELMRACWQWNPSDRPSFAEIHQAFETMFQE 274
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 178 LIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIW 229
L+G K++DFG R T + AG + W APE + + S K D+W
Sbjct: 145 LVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 198
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 20/271 (7%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQ--------KETDIRHL 303
D+WE+ I+ LG G G V+ G K S VAVK ++E KE + +
Sbjct: 8 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV--M 65
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAG 361
+++ HPN+V+ GVCT+ P + I+ E+ YG L + L+ + +EV L A QI++
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 125
Query: 362 MNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPE 418
M YL K IHRDL + N L+G K++DFG R T + AG + W APE
Sbjct: 126 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPE 184
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
+ + S K D+W++G++LWE+ T +PY +D S ++ + + P CP+
Sbjct: 185 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMERPEGCPEKV 243
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
LM+ CW PS RPSF +I + QE
Sbjct: 244 YELMRACWQWNPSDRPSFAEIHQAFETMFQE 274
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 178 LIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIW 229
L+G K++DFG R T + AG + W APE + + S K D+W
Sbjct: 145 LVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 198
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 20/271 (7%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQ--------KETDIRHL 303
D+WE+ I+ LG G G V+ G K S VAVK ++E KE + +
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV--M 68
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAG 361
+++ HPN+V+ GVCT+ P + I+ E+ YG L + L+ + +EV L A QI++
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 128
Query: 362 MNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPE 418
M YL K IHRDL + N L+G K++DFG R T + AG + W APE
Sbjct: 129 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPE 187
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
+ + S K D+W++G++LWE+ T +PY +D S ++ + + P CP+
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMERPEGCPEKV 246
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
LM+ CW PS RPSF +I + QE
Sbjct: 247 YELMRACWQWNPSDRPSFAEIHQAFETMFQE 277
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 178 LIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIW 229
L+G K++DFG R T + AG + W APE + + S K D+W
Sbjct: 148 LVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 201
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 20/271 (7%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQ--------KETDIRHL 303
D+WE+ I+ LG G G V+ G K S VAVK ++E KE + +
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV--M 68
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAG 361
+++ HPN+V+ GVCT+ P + I+ E+ YG L + L+ + +EV L A QI++
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 128
Query: 362 MNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPE 418
M YL K IHRDL + N L+G K++DFG R T + AG + W APE
Sbjct: 129 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPE 187
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
+ + S K D+W++G++LWE+ T +PY +D S ++ + + P CP+
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMERPEGCPEKV 246
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
LM+ CW PS RPSF +I + QE
Sbjct: 247 YELMRACWQWNPSDRPSFAEIHQAFETMFQE 277
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 178 LIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIW 229
L+G K++DFG R T + AG + W APE + + S K D+W
Sbjct: 148 LVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 201
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 20/271 (7%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQ--------KETDIRHL 303
D+WE+ I+ LG G G V+ G K S VAVK ++E KE + +
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV--M 68
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAG 361
+++ HPN+V+ GVCT+ P + I+ E+ YG L + L+ + +EV L A QI++
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 128
Query: 362 MNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPE 418
M YL K IHRDL + N L+G K++DFG R T + AG + W APE
Sbjct: 129 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPE 187
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
+ + S K D+W++G++LWE+ T +PY +D S ++ + + P CP+
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMERPEGCPEKV 246
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
LM+ CW PS RPSF +I + QE
Sbjct: 247 YELMRACWQWNPSDRPSFAEIHQAFETMFQE 277
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 178 LIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIW 229
L+G K++DFG R T + AG + W APE + + S K D+W
Sbjct: 148 LVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 201
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 20/271 (7%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQ--------KETDIRHL 303
D+WE+ I+ LG G G V+ G K S VAVK ++E KE + +
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV--M 63
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAG 361
+++ HPN+V+ GVCT+ P + I+ E+ YG L + L+ + +EV L A QI++
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 123
Query: 362 MNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPE 418
M YL K IHRDL + N L+G K++DFG R T + AG + W APE
Sbjct: 124 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPE 182
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
+ + S K D+W++G++LWE+ T +PY +D S ++ + + P CP+
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMERPEGCPEKV 241
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
LM+ CW PS RPSF +I + QE
Sbjct: 242 YELMRACWQWNPSDRPSFAEIHQAFETMFQE 272
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 178 LIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIW 229
L+G K++DFG R T + AG + W APE + + S K D+W
Sbjct: 143 LVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 20/271 (7%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQ--------KETDIRHL 303
D+WE+ I+ LG G G V+ G K S VAVK ++E KE + +
Sbjct: 10 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV--M 67
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAG 361
+++ HPN+V+ GVCT+ P + I+ E+ YG L + L+ + +EV L A QI++
Sbjct: 68 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 127
Query: 362 MNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPE 418
M YL K IHRDL + N L+G K++DFG R T + AG + W APE
Sbjct: 128 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPE 186
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
+ + S K D+W++G++LWE+ T +PY +D S ++ + + P CP+
Sbjct: 187 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMERPEGCPEKV 245
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
LM+ CW PS RPSF +I + QE
Sbjct: 246 YELMRACWQWNPSDRPSFAEIHQAFETMFQE 276
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 178 LIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIW 229
L+G K++DFG R T + AG + W APE + + S K D+W
Sbjct: 147 LVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 200
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 20/271 (7%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQ--------KETDIRHL 303
D+WE+ I+ LG G G V+ G K S VAVK ++E KE + +
Sbjct: 8 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV--M 65
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAG 361
+++ HPN+V+ GVCT+ P + I+ E+ YG L + L+ + +EV L A QI++
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 125
Query: 362 MNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPE 418
M YL K IHRDL + N L+G K++DFG R T + AG + W APE
Sbjct: 126 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAPAGAKFPIKWTAPE 184
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
+ + S K D+W++G++LWE+ T +PY +D S ++ + + P CP+
Sbjct: 185 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMERPEGCPEKV 243
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
LM+ CW PS RPSF +I + QE
Sbjct: 244 YELMRACWQWNPSDRPSFAEIHQAFETMFQE 274
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 178 LIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIW 229
L+G K++DFG R T + AG + W APE + + S K D+W
Sbjct: 145 LVGENHLVKVADFGLSRLMTG-DTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVW 198
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 20/271 (7%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQ--------KETDIRHL 303
D+WE+ I+ LG G G V+ G K S VAVK ++E KE + +
Sbjct: 7 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV--M 64
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAG 361
+++ HPN+V+ GVCT+ P + I+ E+ YG L + L+ + +EV L A QI++
Sbjct: 65 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 124
Query: 362 MNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPE 418
M YL K IHRDL + N L+G K++DFG R T + AG + W APE
Sbjct: 125 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAPAGAKFPIKWTAPE 183
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
+ + S K D+W++G++LWE+ T +PY +D S ++ + + P CP+
Sbjct: 184 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMERPEGCPEKV 242
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
LM+ CW PS RPSF +I + QE
Sbjct: 243 YELMRACWQWNPSDRPSFAEIHQAFETMFQE 273
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 178 LIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIW 229
L+G K++DFG R T + AG + W APE + + S K D+W
Sbjct: 144 LVGENHLVKVADFGLSRLMTG-DTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVW 197
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 91/261 (34%), Positives = 137/261 (52%), Gaps = 20/261 (7%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQ--------KETDIRHL 303
D+WE+ I+ LG G G V+ G K S VAVK ++E KE + +
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV--M 63
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAG 361
+++ HPN+V+ GVCT+ P + I+ E+ YG L + L+ + +EV L A QI++
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 123
Query: 362 MNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPE 418
M YL K IHRDL + N L+G K++DFG R T + AG + W APE
Sbjct: 124 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPE 182
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
+ + S K D+W++G++LWE+ T +PY +D S ++ + + P CP+
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMERPEGCPEKV 241
Query: 478 QLLMKMCWSNAPSSRPSFKQI 498
LM+ CW PS RPSF +I
Sbjct: 242 YELMRACWQWNPSDRPSFAEI 262
Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 178 LIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIW 229
L+G K++DFG R T + AG + W APE + + S K D+W
Sbjct: 143 LVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 92/271 (33%), Positives = 140/271 (51%), Gaps = 20/271 (7%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQ--------KETDIRHL 303
D+WE+ I+ LG G G V+ G K S VAVK ++E KE + +
Sbjct: 213 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV--M 270
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAG 361
+++ HPN+V+ GVCT+ P + I+ E+ YG L + L+ + +EV L A QI++
Sbjct: 271 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 330
Query: 362 MNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPE 418
M YL K IHR+L + N L+G K++DFG R T + AG + W APE
Sbjct: 331 MEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPE 389
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
+ + S K D+W++G++LWE+ T +PY +D S ++ + + P CP+
Sbjct: 390 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMERPEGCPEKV 448
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
LM+ CW PS RPSF +I + QE
Sbjct: 449 YELMRACWQWNPSDRPSFAEIHQAFETMFQE 479
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 178 LIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIW 229
L+G K++DFG R T + AG + W APE + + S K D+W
Sbjct: 350 LVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 403
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 92/271 (33%), Positives = 140/271 (51%), Gaps = 20/271 (7%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQ--------KETDIRHL 303
D+WE+ I+ LG G G V+ G K S VAVK ++E KE + +
Sbjct: 210 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV--M 267
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAG 361
+++ HPN+V+ GVCT+ P + I+ E+ YG L + L+ + +EV L A QI++
Sbjct: 268 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 327
Query: 362 MNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPE 418
M YL K IHR+L + N L+G K++DFG R T + AG + W APE
Sbjct: 328 MEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPE 386
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
+ + S K D+W++G++LWE+ T +PY +D S ++ + + P CP+
Sbjct: 387 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMERPEGCPEKV 445
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
LM+ CW PS RPSF +I + QE
Sbjct: 446 YELMRACWQWNPSDRPSFAEIHQAFETMFQE 476
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 178 LIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIW 229
L+G K++DFG R T + AG + W APE + + S K D+W
Sbjct: 347 LVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 400
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/271 (33%), Positives = 140/271 (51%), Gaps = 20/271 (7%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQ--------KETDIRHL 303
D+WE+ I+ LG G G V+ G K S VAVK ++E KE + +
Sbjct: 252 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV--M 309
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAG 361
+++ HPN+V+ GVCT+ P + I+ E+ YG L + L+ + +EV L A QI++
Sbjct: 310 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 369
Query: 362 MNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPE 418
M YL K IHR+L + N L+G K++DFG R T + AG + W APE
Sbjct: 370 MEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPE 428
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
+ + S K D+W++G++LWE+ T +PY +D S ++ + + P CP+
Sbjct: 429 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMERPEGCPEKV 487
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
LM+ CW PS RPSF +I + QE
Sbjct: 488 YELMRACWQWNPSDRPSFAEIHQAFETMFQE 518
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 178 LIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIW 229
L+G K++DFG R T + AG + W APE + + S K D+W
Sbjct: 389 LVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 442
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/264 (35%), Positives = 135/264 (51%), Gaps = 20/264 (7%)
Query: 250 FVLRDEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQ--------KETD 299
F D+WE+ I+ LG G G V+ G K S VAVK ++E KE
Sbjct: 21 FQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 80
Query: 300 IRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQ 357
+ ++++ HPN+V+ GVCT P + IV EY YG L + L+ + EEV L A Q
Sbjct: 81 V--MKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQ 138
Query: 358 IAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAW 414
I++ M YL K IHRDL + N L+G K++DFG R T + AG + W
Sbjct: 139 ISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTG-DTYTAHAGAKFPIKW 197
Query: 415 MAPEVIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAIIWGVGSSSLHLPIPSTC 473
APE + S K D+W++G++LWE+ T +PY +D S ++ + + P C
Sbjct: 198 TAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYDLLEKGYRMEQPEGC 256
Query: 474 PDGFQLLMKMCWSNAPSSRPSFKQ 497
P LM+ CW +P+ RPSF +
Sbjct: 257 PPKVYELMRACWKWSPADRPSFAE 280
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Query: 178 LIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIW 229
L+G K++DFG R T + AG + W APE + S K D+W
Sbjct: 162 LVGENHVVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVW 215
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 91/263 (34%), Positives = 137/263 (52%), Gaps = 14/263 (5%)
Query: 253 RDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVR------EQKETDIRHLRK 305
+D WEIP ES+ ++ LG+G G V+ G VA+K ++ E + + ++K
Sbjct: 1 KDVWEIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKK 60
Query: 306 LNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGE--EVPPQRLYNWARQIAAGMN 363
L H +V+ V ++ P Y IV EY G L + LKDGE + L + A Q+AAGM
Sbjct: 61 LKHDKLVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMA 119
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIR 421
Y+ IHRDL+S N+L+G+ KI+DFG R E N + + + W APE
Sbjct: 120 YIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAAL 179
Query: 422 NEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLL 480
+ + K D+WS+GI+L EL+T PY +++ ++ V +P P CP L
Sbjct: 180 YGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQV-ERGYRMPCPQDCPISLHEL 238
Query: 481 MKMCWSNAPSSRPSFKQILSHLD 503
M CW P RP+F+ + S L+
Sbjct: 239 MIHCWKKDPEERPTFEYLQSFLE 261
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+G+ KI+DFG R E N + + + W APE + + K D+W
Sbjct: 136 ILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 190
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 145/285 (50%), Gaps = 30/285 (10%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFS------GKLRSEI-VAVKKVR-----EQKETDIR 301
++WE P ++ + LG+GA G V GK + + VAVK ++ ++KE +
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 302 HLRKLNH----PNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK----------DGEEVP 347
L+ ++H NIV G CT ++ EYC YG L N L+ DG +
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLE 158
Query: 348 PQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMS 407
+ L +++ Q+A GM +L SK IHRD+ + NVL+ + AKI DFG R+ N S +
Sbjct: 159 LRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 218
Query: 408 FAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAIIWGVGSS 463
V WMAPE I + + + D+WSYGI+LWE+ + PY + ++ + +
Sbjct: 219 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKD 278
Query: 464 SLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
+ P+ P +M+ CW+ P+ RP+F+QI S L +QE
Sbjct: 279 GYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 323
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 9/76 (11%)
Query: 159 FLA--GCTTPDALAESIGLGVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMA 213
FLA C D A + VL+ + AKI DFG R+ N S + V WMA
Sbjct: 175 FLASKNCIHRDVAARN----VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 230
Query: 214 PEVIRNEQCSDKIDIW 229
PE I + + + D+W
Sbjct: 231 PESIFDCVYTVQSDVW 246
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 145/285 (50%), Gaps = 30/285 (10%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFS------GKLRSEI-VAVKKVR-----EQKETDIR 301
++WE P ++ + LG+GA G V GK + + VAVK ++ ++KE +
Sbjct: 31 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 90
Query: 302 HLRKLNH----PNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK----------DGEEVP 347
L+ ++H NIV G CT ++ EYC YG L N L+ DG +
Sbjct: 91 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLE 150
Query: 348 PQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMS 407
+ L +++ Q+A GM +L SK IHRD+ + NVL+ + AKI DFG R+ N S +
Sbjct: 151 LRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 210
Query: 408 FAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAIIWGVGSS 463
V WMAPE I + + + D+WSYGI+LWE+ + PY + ++ + +
Sbjct: 211 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKD 270
Query: 464 SLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
+ P+ P +M+ CW+ P+ RP+F+QI S L +QE
Sbjct: 271 GYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 315
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 9/76 (11%)
Query: 159 FLA--GCTTPDALAESIGLGVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMA 213
FLA C D A + VL+ + AKI DFG R+ N S + V WMA
Sbjct: 167 FLASKNCIHRDVAARN----VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 222
Query: 214 PEVIRNEQCSDKIDIW 229
PE I + + + D+W
Sbjct: 223 PESIFDCVYTVQSDVW 238
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 136/263 (51%), Gaps = 14/263 (5%)
Query: 253 RDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVR------EQKETDIRHLRK 305
+D WEIP ES+ + LG+G G V+ VAVK ++ E + ++
Sbjct: 7 KDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKT 66
Query: 306 LNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAGMN 363
L H +VK V T+ P Y I+ E+ A G L + LK +G + P +L +++ QIA GM
Sbjct: 67 LQHDKLVKLHAVVTKEPIY-IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMA 125
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIR 421
++ + IHRDL++ N+L+ + KI+DFG R E N + + + W APE I
Sbjct: 126 FIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAIN 185
Query: 422 NEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLL 480
+ K D+WS+GI+L E++T PY + + +I + +P P CP+ +
Sbjct: 186 FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL-ERGYRMPRPENCPEELYNI 244
Query: 481 MKMCWSNAPSSRPSFKQILSHLD 503
M CW N P RP+F+ I S LD
Sbjct: 245 MMRCWKNRPEERPTFEYIQSVLD 267
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNRL 234
+L+ + KI+DFG R E N + + + W APE I + K D+W L
Sbjct: 142 ILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGIL 201
Query: 235 CFPTSLMARI 244
RI
Sbjct: 202 LMEIVTYGRI 211
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 136/263 (51%), Gaps = 14/263 (5%)
Query: 253 RDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVR------EQKETDIRHLRK 305
+D WEIP ES+ + LG+G G V+ VAVK ++ E + ++
Sbjct: 180 KDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKT 239
Query: 306 LNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAGMN 363
L H +VK V T+ P Y I+ E+ A G L + LK +G + P +L +++ QIA GM
Sbjct: 240 LQHDKLVKLHAVVTKEPIY-IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMA 298
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIR 421
++ + IHRDL++ N+L+ + KI+DFG R E N + + + W APE I
Sbjct: 299 FIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAIN 358
Query: 422 NEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLL 480
+ K D+WS+GI+L E++T PY + + +I + +P P CP+ +
Sbjct: 359 FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL-ERGYRMPRPENCPEELYNI 417
Query: 481 MKMCWSNAPSSRPSFKQILSHLD 503
M CW N P RP+F+ I S LD
Sbjct: 418 MMRCWKNRPEERPTFEYIQSVLD 440
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNRL 234
+L+ + KI+DFG R E N + + + W APE I + K D+W L
Sbjct: 315 ILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGIL 374
Query: 235 CFPTSLMARI 244
RI
Sbjct: 375 LMEIVTYGRI 384
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 141/276 (51%), Gaps = 15/276 (5%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVREQKET------DIRHLRKL 306
DEWE+P E++ ++ LG+G G V+ G VAVK +++ + + +++L
Sbjct: 15 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 74
Query: 307 NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAGMNY 364
H +V+ V TQ P Y I+ EY G L + LK G ++ +L + A QIA GM +
Sbjct: 75 QHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 133
Query: 365 LHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRN 422
+ + IHRDL++ N+L+ KI+DFG R E N + + + W APE I
Sbjct: 134 IEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINY 193
Query: 423 EQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLM 481
+ K D+WS+GI+L E++T PY + + +I + + P CP+ LM
Sbjct: 194 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-ERGYRMVRPDNCPEELYQLM 252
Query: 482 KMCWSNAPSSRPSFKQILSHL-DIASQEVLRIQPEP 516
++CW P RP+F + S L D + + QP+P
Sbjct: 253 RLCWKERPEDRPTFDYLRSVLEDFFTATEGQFQPQP 288
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ KI+DFG R E N + + + W APE I + K D+W
Sbjct: 149 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 203
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 141/276 (51%), Gaps = 15/276 (5%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVREQKET------DIRHLRKL 306
DEWE+P E++ ++ LG+G G V+ G VAVK +++ + + +++L
Sbjct: 12 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 71
Query: 307 NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAGMNY 364
H +V+ V TQ P Y I+ EY G L + LK G ++ +L + A QIA GM +
Sbjct: 72 QHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 130
Query: 365 LHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRN 422
+ + IHRDL++ N+L+ KI+DFG R E N + + + W APE I
Sbjct: 131 IEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINY 190
Query: 423 EQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLM 481
+ K D+WS+GI+L E++T PY + + +I + + P CP+ LM
Sbjct: 191 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-ERGYRMVRPDNCPEELYQLM 249
Query: 482 KMCWSNAPSSRPSFKQILSHL-DIASQEVLRIQPEP 516
++CW P RP+F + S L D + + QP+P
Sbjct: 250 RLCWKERPEDRPTFDYLRSVLEDFFTATEGQYQPQP 285
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ KI+DFG R E N + + + W APE I + K D+W
Sbjct: 146 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 200
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 141/276 (51%), Gaps = 15/276 (5%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVREQKET------DIRHLRKL 306
DEWE+P E++ ++ LG+G G V+ G VAVK +++ + + +++L
Sbjct: 14 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 73
Query: 307 NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAGMNY 364
H +V+ V TQ P Y I+ EY G L + LK G ++ +L + A QIA GM +
Sbjct: 74 QHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 132
Query: 365 LHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRN 422
+ + IHRDL++ N+L+ KI+DFG R E N + + + W APE I
Sbjct: 133 IEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINY 192
Query: 423 EQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLM 481
+ K D+WS+GI+L E++T PY + + +I + + P CP+ LM
Sbjct: 193 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-ERGYRMVRPDNCPEELYQLM 251
Query: 482 KMCWSNAPSSRPSFKQILSHL-DIASQEVLRIQPEP 516
++CW P RP+F + S L D + + QP+P
Sbjct: 252 RLCWKERPEDRPTFDYLRSVLEDFFTATEGQYQPQP 287
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ KI+DFG R E N + + + W APE I + K D+W
Sbjct: 148 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 202
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 141/276 (51%), Gaps = 15/276 (5%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVREQKET------DIRHLRKL 306
DEWE+P E++ ++ LG+G G V+ G VAVK +++ + + +++L
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 65
Query: 307 NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAGMNY 364
H +V+ V TQ P Y I+ EY G L + LK G ++ +L + A QIA GM +
Sbjct: 66 QHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 365 LHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRN 422
+ + IHRDL++ N+L+ KI+DFG R E N + + + W APE I
Sbjct: 125 IEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINY 184
Query: 423 EQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLM 481
+ K D+WS+GI+L E++T PY + + +I + + P CP+ LM
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-ERGYRMVRPDNCPEELYQLM 243
Query: 482 KMCWSNAPSSRPSFKQILSHL-DIASQEVLRIQPEP 516
++CW P RP+F + S L D + + QP+P
Sbjct: 244 RLCWKERPEDRPTFDYLRSVLEDFFTATEGQYQPQP 279
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ KI+DFG R E N + + + W APE I + K D+W
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 141/276 (51%), Gaps = 15/276 (5%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVREQKET------DIRHLRKL 306
DEWE+P E++ ++ LG+G G V+ G VAVK +++ + + +++L
Sbjct: 16 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 75
Query: 307 NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAGMNY 364
H +V+ V TQ P Y I+ EY G L + LK G ++ +L + A QIA GM +
Sbjct: 76 QHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 134
Query: 365 LHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRN 422
+ + IHRDL++ N+L+ KI+DFG R E N + + + W APE I
Sbjct: 135 IEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY 194
Query: 423 EQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLM 481
+ K D+WS+GI+L E++T PY + + +I + + P CP+ LM
Sbjct: 195 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-ERGYRMVRPDNCPEELYQLM 253
Query: 482 KMCWSNAPSSRPSFKQILSHL-DIASQEVLRIQPEP 516
++CW P RP+F + S L D + + QP+P
Sbjct: 254 RLCWKERPEDRPTFDYLRSVLEDFFTATEGQYQPQP 289
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ KI+DFG R E N + + + W APE I + K D+W
Sbjct: 150 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 204
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 90/263 (34%), Positives = 137/263 (52%), Gaps = 13/263 (4%)
Query: 253 RDEWEIPFESISDLQWLGSGAQGAVFSGKLR-SEIVAVKKVREQKET------DIRHLRK 305
+D WEIP ESI ++ LG+G G V+ G S VAVK ++ + + ++
Sbjct: 5 KDAWEIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKT 64
Query: 306 LNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAGMN 363
L H +V+ V T+ I+ EY A G L + LK +G +V +L +++ QIA GM
Sbjct: 65 LQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMA 124
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIR 421
Y+ K IHRDL++ NVL+ KI+DFG R E N + + + W APE I
Sbjct: 125 YIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAIN 184
Query: 422 NEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLL 480
+ K D+WS+GI+L+E++T + PY ++ ++ + S +P CPD +
Sbjct: 185 FGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTAL-SQGYRMPRVENCPDELYDI 243
Query: 481 MKMCWSNAPSSRPSFKQILSHLD 503
MKMCW RP+F + S LD
Sbjct: 244 MKMCWKEKAEERPTFDYLQSVLD 266
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNRL 234
VL+ KI+DFG R E N + + + W APE I + K D+W L
Sbjct: 141 VLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGIL 200
Query: 235 CFPTSLMARI 244
+ +I
Sbjct: 201 LYEIVTYGKI 210
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 135/262 (51%), Gaps = 14/262 (5%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVREQKET------DIRHLRKL 306
DEWE+P E++ ++ LG+G G V+ G VAVK +++ + + +++L
Sbjct: 1 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 60
Query: 307 NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAGMNY 364
H +V+ V TQ P Y I+ EY G L + LK G ++ +L + A QIA GM +
Sbjct: 61 QHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 119
Query: 365 LHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRN 422
+ + IHRDL++ N+L+ KI+DFG R E N + + + W APE I
Sbjct: 120 IEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY 179
Query: 423 EQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLM 481
+ K D+WS+GI+L E++T PY + + +I + + P CP+ LM
Sbjct: 180 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-ERGYRMVRPDNCPEELYQLM 238
Query: 482 KMCWSNAPSSRPSFKQILSHLD 503
++CW P RP+F + S L+
Sbjct: 239 RLCWKERPEDRPTFDYLRSVLE 260
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ KI+DFG R E N + + + W APE I + K D+W
Sbjct: 135 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 189
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 135/262 (51%), Gaps = 14/262 (5%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVREQKET------DIRHLRKL 306
DEWE+P E++ ++ LG+G G V+ G VAVK +++ + + +++L
Sbjct: 7 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 66
Query: 307 NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAGMNY 364
H +V+ V TQ P Y I+ EY G L + LK G ++ +L + A QIA GM +
Sbjct: 67 QHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 125
Query: 365 LHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRN 422
+ + IHRDL++ N+L+ KI+DFG R E N + + + W APE I
Sbjct: 126 IEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINY 185
Query: 423 EQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLM 481
+ K D+WS+GI+L E++T PY + + +I + + P CP+ LM
Sbjct: 186 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-ERGYRMVRPDNCPEELYQLM 244
Query: 482 KMCWSNAPSSRPSFKQILSHLD 503
++CW P RP+F + S L+
Sbjct: 245 RLCWKERPEDRPTFDYLRSVLE 266
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ KI+DFG R E N + + + W APE I + K D+W
Sbjct: 141 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 195
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 135/262 (51%), Gaps = 14/262 (5%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVREQKET------DIRHLRKL 306
DEWE+P E++ ++ LG+G G V+ G VAVK +++ + + +++L
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 65
Query: 307 NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAGMNY 364
H +V+ V TQ P Y I+ EY G L + LK G ++ +L + A QIA GM +
Sbjct: 66 QHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 365 LHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRN 422
+ + IHRDL++ N+L+ KI+DFG R E N + + + W APE I
Sbjct: 125 IEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINY 184
Query: 423 EQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLM 481
+ K D+WS+GI+L E++T PY + + +I + + P CP+ LM
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-ERGYRMVRPDNCPEELYQLM 243
Query: 482 KMCWSNAPSSRPSFKQILSHLD 503
++CW P RP+F + S L+
Sbjct: 244 RLCWKERPEDRPTFDYLRSVLE 265
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ KI+DFG R E N + + + W APE I + K D+W
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 135/262 (51%), Gaps = 14/262 (5%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVREQKET------DIRHLRKL 306
DEWE+P E++ ++ LG+G G V+ G VAVK +++ + + +++L
Sbjct: 11 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 70
Query: 307 NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAGMNY 364
H +V+ V TQ P Y I+ EY G L + LK G ++ +L + A QIA GM +
Sbjct: 71 QHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 129
Query: 365 LHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRN 422
+ + IHRDL++ N+L+ KI+DFG R E N + + + W APE I
Sbjct: 130 IEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY 189
Query: 423 EQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLM 481
+ K D+WS+GI+L E++T PY + + +I + + P CP+ LM
Sbjct: 190 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-ERGYRMVRPDNCPEELYQLM 248
Query: 482 KMCWSNAPSSRPSFKQILSHLD 503
++CW P RP+F + S L+
Sbjct: 249 RLCWKERPEDRPTFDYLRSVLE 270
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ KI+DFG R E N + + + W APE I + K D+W
Sbjct: 145 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 199
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 135/262 (51%), Gaps = 14/262 (5%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVREQKET------DIRHLRKL 306
DEWE+P E++ ++ LG+G G V+ G VAVK +++ + + +++L
Sbjct: 8 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 67
Query: 307 NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAGMNY 364
H +V+ V TQ P Y I+ EY G L + LK G ++ +L + A QIA GM +
Sbjct: 68 QHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 126
Query: 365 LHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRN 422
+ + IHRDL++ N+L+ KI+DFG R E N + + + W APE I
Sbjct: 127 IEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINY 186
Query: 423 EQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLM 481
+ K D+WS+GI+L E++T PY + + +I + + P CP+ LM
Sbjct: 187 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-ERGYRMVRPDNCPEELYQLM 245
Query: 482 KMCWSNAPSSRPSFKQILSHLD 503
++CW P RP+F + S L+
Sbjct: 246 RLCWKERPEDRPTFDYLRSVLE 267
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ KI+DFG R E N + + + W APE I + K D+W
Sbjct: 142 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 196
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 135/262 (51%), Gaps = 14/262 (5%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVREQKET------DIRHLRKL 306
DEWE+P E++ ++ LG+G G V+ G VAVK +++ + + +++L
Sbjct: 12 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 71
Query: 307 NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAGMNY 364
H +V+ V TQ P Y I+ EY G L + LK G ++ +L + A QIA GM +
Sbjct: 72 QHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 130
Query: 365 LHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRN 422
+ + IHRDL++ N+L+ KI+DFG R E N + + + W APE I
Sbjct: 131 IEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY 190
Query: 423 EQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLM 481
+ K D+WS+GI+L E++T PY + + +I + + P CP+ LM
Sbjct: 191 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-ERGYRMVRPDNCPEELYQLM 249
Query: 482 KMCWSNAPSSRPSFKQILSHLD 503
++CW P RP+F + S L+
Sbjct: 250 RLCWKERPEDRPTFDYLRSVLE 271
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ KI+DFG R E N + + + W APE I + K D+W
Sbjct: 146 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 200
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 143/289 (49%), Gaps = 34/289 (11%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFS------GKLRSEI-VAVKKVR-----EQKETDIR 301
++WE P ++ + LG+GA G V GK + + VAVK ++ ++KE +
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 302 HLRKLNH----PNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV----------- 346
L+ ++H NIV G CT ++ EYC YG L N L+ V
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIAN 158
Query: 347 ---PPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKS 403
+ L +++ Q+A GM +L SK IHRD+ + NVL+ + AKI DFG R+ N S
Sbjct: 159 STLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 218
Query: 404 TKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAIIWG 459
+ V WMAPE I + + + D+WSYGI+LWE+ + PY + ++ +
Sbjct: 219 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYK 278
Query: 460 VGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
+ + P+ P +M+ CW+ P+ RP+F+QI S L +QE
Sbjct: 279 LVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 9/76 (11%)
Query: 159 FLA--GCTTPDALAESIGLGVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMA 213
FLA C D A + VL+ + AKI DFG R+ N S + V WMA
Sbjct: 179 FLASKNCIHRDVAARN----VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 234
Query: 214 PEVIRNEQCSDKIDIW 229
PE I + + + D+W
Sbjct: 235 PESIFDCVYTVQSDVW 250
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 146/294 (49%), Gaps = 36/294 (12%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFS------GKLRSEI-VAVKKVR-----EQKETDIR 301
++WE P ++ + LG+GA G V GK + + VAVK ++ ++KE +
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 302 HLRKLNH----PNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDG-------------- 343
L+ ++H NIV G CT ++ EYC YG L N L+
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHN 158
Query: 344 --EEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNN 401
E++ + L +++ Q+A GM +L SK IHRD+ + NVL+ + AKI DFG R+ N
Sbjct: 159 PEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 218
Query: 402 KSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAII 457
S + V WMAPE I + + + D+WSYGI+LWE+ + PY + ++
Sbjct: 219 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKF 278
Query: 458 WGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLDIASQEVLR 511
+ + + P+ P +M+ CW+ P+ RP+F+QI S L +QE R
Sbjct: 279 YKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDRR 332
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 9/76 (11%)
Query: 159 FLA--GCTTPDALAESIGLGVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMA 213
FLA C D A + VL+ + AKI DFG R+ N S + V WMA
Sbjct: 181 FLASKNCIHRDVAARN----VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 236
Query: 214 PEVIRNEQCSDKIDIW 229
PE I + + + D+W
Sbjct: 237 PESIFDCVYTVQSDVW 252
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 133/261 (50%), Gaps = 20/261 (7%)
Query: 253 RDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVR------EQKETDIRHLRK 305
+D WEIP ES+ + LG+G G V+ VAVK ++ E + ++
Sbjct: 174 KDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKT 233
Query: 306 LNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAGMN 363
L H +VK V T+ P Y I+ E+ A G L + LK +G + P +L +++ QIA GM
Sbjct: 234 LQHDKLVKLHAVVTKEPIY-IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMA 292
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNE 423
++ + IHRDL++ N+L+ + KI+DFG R + + W APE I
Sbjct: 293 FIEQRNYIHRDLRAANILVSASLVCKIADFGLAR--------VGAKFPIKWTAPEAINFG 344
Query: 424 QCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMK 482
+ K D+WS+GI+L E++T PY + + +I + +P P CP+ +M
Sbjct: 345 SFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL-ERGYRMPRPENCPEELYNIMM 403
Query: 483 MCWSNAPSSRPSFKQILSHLD 503
CW N P RP+F+ I S LD
Sbjct: 404 RCWKNRPEERPTFEYIQSVLD 424
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 143/289 (49%), Gaps = 34/289 (11%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFS------GKLRSEI-VAVKKVR-----EQKETDIR 301
++WE P ++ + LG+GA G V GK + + VAVK ++ ++KE +
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 302 HLRKLNH----PNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV----------- 346
L+ ++H NIV G CT ++ EYC YG L N L+ V
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIAN 158
Query: 347 ---PPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKS 403
+ L +++ Q+A GM +L SK IHRD+ + NVL+ + AKI DFG R+ N S
Sbjct: 159 STASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 218
Query: 404 TKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAIIWG 459
+ V WMAPE I + + + D+WSYGI+LWE+ + PY + ++ +
Sbjct: 219 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYK 278
Query: 460 VGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
+ + P+ P +M+ CW+ P+ RP+F+QI S L +QE
Sbjct: 279 LVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 9/76 (11%)
Query: 159 FLA--GCTTPDALAESIGLGVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMA 213
FLA C D A + VL+ + AKI DFG R+ N S + V WMA
Sbjct: 179 FLASKNCIHRDVAARN----VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 234
Query: 214 PEVIRNEQCSDKIDIW 229
PE I + + + D+W
Sbjct: 235 PESIFDCVYTVQSDVW 250
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 136/259 (52%), Gaps = 14/259 (5%)
Query: 257 EIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVREQKETD------IRHLRKLNHP 309
E+ E I+ L+ LGSG G V GK + + VAVK ++E ++ + + KL+HP
Sbjct: 4 ELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHP 63
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKD-GEEVPPQRLYNWARQIAAGMNYLHSK 368
+VKF GVC++ IV EY + G L N L+ G+ + P +L + GM +L S
Sbjct: 64 KLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH 123
Query: 369 QIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQC 425
Q IHRDL + N L+ K+SDFG R + +S GT V W APEV +
Sbjct: 124 QFIHRDLAARNCLVDRDLCVKVSDFGMTR-YVLDDQYVSSVGTKFPVKWSAPEVFHYFKY 182
Query: 426 SDKIDIWSYGIVLWELLTC-ETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMC 484
S K D+W++GI++WE+ + + PY +S ++ V S L P D +M C
Sbjct: 183 SSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKV-SQGHRLYRPHLASDTIYQIMYSC 241
Query: 485 WSNAPSSRPSFKQILSHLD 503
W P RP+F+Q+LS ++
Sbjct: 242 WHELPEKRPTFQQLLSSIE 260
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Query: 185 AKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIW 229
K+SDFG R + +S GT V W APEV + S K D+W
Sbjct: 143 VKVSDFGMTR-YVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVW 189
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 135/262 (51%), Gaps = 14/262 (5%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVREQKET------DIRHLRKL 306
DEWE+P E++ ++ LG+G G V+ G VAVK +++ + + +++L
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 65
Query: 307 NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAGMNY 364
H +V+ V TQ P Y I+ EY G L + LK G ++ +L + A QIA GM +
Sbjct: 66 QHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 365 LHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRN 422
+ + IHRDL++ N+L+ KI+DFG R E N + + + W APE I
Sbjct: 125 IEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY 184
Query: 423 EQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLM 481
+ K D+WS+GI+L E++T PY + + +I + + P CP+ LM
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-ERGYRMVRPDNCPEELYQLM 243
Query: 482 KMCWSNAPSSRPSFKQILSHLD 503
++CW P RP+F + S L+
Sbjct: 244 RLCWKERPEDRPTFDYLRSVLE 265
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ KI+DFG R E N + + + W APE I + K D+W
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 145/298 (48%), Gaps = 43/298 (14%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFS------GKLRSEI-VAVKKVR-----EQKETDIR 301
++WE P ++ + LG+GA G V GK + + VAVK ++ ++KE +
Sbjct: 24 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 83
Query: 302 HLRKLNH----PNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK---------------- 341
L+ ++H NIV G CT ++ EYC YG L N L+
Sbjct: 84 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQD 143
Query: 342 -------DGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFG 394
DG + + L +++ Q+A GM +L SK IHRD+ + NVL+ + AKI DFG
Sbjct: 144 PEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFG 203
Query: 395 TCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKD 450
R+ N S + V WMAPE I + + + D+WSYGI+LWE+ + PY
Sbjct: 204 LARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 263
Query: 451 VDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
+ ++ + + + P+ P +M+ CW+ P+ RP+F+QI S L +QE
Sbjct: 264 ILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 321
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 9/76 (11%)
Query: 159 FLA--GCTTPDALAESIGLGVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMA 213
FLA C D A + VL+ + AKI DFG R+ N S + V WMA
Sbjct: 173 FLASKNCIHRDVAARN----VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 228
Query: 214 PEVIRNEQCSDKIDIW 229
PE I + + + D+W
Sbjct: 229 PESIFDCVYTVQSDVW 244
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 90/255 (35%), Positives = 132/255 (51%), Gaps = 22/255 (8%)
Query: 269 LGSGAQGAVFSGKL-----RSEIVAVKKVR----EQKETDI----RHLRKLNHPNIVKFK 315
+G+G G V SG+L R VA+K ++ E++ D + + +HPN+V +
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 316 GVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAGMNYLHSKQIIHR 373
GV T+ IV+E+ G L L+ DG+ Q L R IAAGM YL +HR
Sbjct: 111 GVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQ-LVGMLRGIAAGMRYLADMGYVHR 169
Query: 374 DLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGT--VAWMAPEVIRNEQCSDKI 429
DL + N+L+ S K+SDFG R E + ++ + G V W APE I+ + +
Sbjct: 170 DLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSAS 229
Query: 430 DIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNA 488
D+WSYGIV+WE+++ E PY D+ + +I + LP P CP G LM CW
Sbjct: 230 DVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI-EEGYRLPAPMDCPAGLHQLMLDCWQKE 288
Query: 489 PSSRPSFKQILSHLD 503
+ RP F+QI+ LD
Sbjct: 289 RAERPKFEQIVGILD 303
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGT--VAWMAPEVIRNEQCSDKIDIW 229
+L+ S K+SDFG R E + ++ + G V W APE I+ + + D+W
Sbjct: 176 ILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVW 232
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/277 (35%), Positives = 137/277 (49%), Gaps = 22/277 (7%)
Query: 256 WEIPFESISDLQWLGSGAQGAVFSGKLRSEIVAVKKVREQKET---------DIRHLRKL 306
WEI + +GSG+ G V+ GK + VAVK ++ T ++ LRK
Sbjct: 31 WEIEASEVMLSTRIGSGSFGTVYKGKWHGD-VAVKILKVVDPTPEQFQAFRNEVAVLRKT 89
Query: 307 NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGE-EVPPQRLYNWARQIAAGMNYL 365
H NI+ F G T+ IV ++C LY L E + +L + ARQ A GM+YL
Sbjct: 90 RHVNILLFMGYMTKDNL-AIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYL 148
Query: 366 HSKQIIHRDLKSPNVLIGSKEEAKISDFGTC---REWNNKSTKMSFAGTVAWMAPEVIR- 421
H+K IIHRD+KS N+ + KI DFG W+ G+V WMAPEVIR
Sbjct: 149 HAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRM 208
Query: 422 --NEQCSDKIDIWSYGIVLWELLTCETPYKDV---DSSAIIWGVGSSSLHLP-IPSTCPD 475
N S + D++SYGIVL+EL+T E PY + D + G G +S L + CP
Sbjct: 209 QDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPK 268
Query: 476 GFQLLMKMCWSNAPSSRPSFKQILSHLDIASQEVLRI 512
+ L+ C RP F QILS +++ + +I
Sbjct: 269 AMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPKI 305
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Query: 185 AKISDFGTC---REWNNKSTKMSFAGTVAWMAPEVIR 218
KI DFG W+ G+V WMAPEVIR
Sbjct: 171 VKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIR 207
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 139/276 (50%), Gaps = 15/276 (5%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVREQKET------DIRHLRKL 306
D WE+P E++ ++ LG+G G V+ G VAVK +++ + + +++L
Sbjct: 6 DAWEVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 65
Query: 307 NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAGMNY 364
H +V+ V TQ P Y I+ EY G L + LK G ++ +L + A QIA GM +
Sbjct: 66 QHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 365 LHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRN 422
+ + IHRDL++ N+L+ KI+DFG R E + + + W APE I
Sbjct: 125 IEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINY 184
Query: 423 EQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLM 481
+ K D+WS+GI+L E++T PY + + +I + + P CP+ LM
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-ERGYRMVRPDNCPEELYQLM 243
Query: 482 KMCWSNAPSSRPSFKQILSHL-DIASQEVLRIQPEP 516
++CW P RP+F + S L D + + QP+P
Sbjct: 244 RLCWKERPEDRPTFDYLRSVLEDFFTATEGQYQPQP 279
Score = 29.3 bits (64), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ KI+DFG R E + + + W APE I + K D+W
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 134/269 (49%), Gaps = 24/269 (8%)
Query: 257 EIPFESISDLQWLGSGAQGAVFSGKL-----RSEIVAVKKVR----EQKETDIRH----L 303
EI + Q +G+G G V SG L R VA+K ++ E++ D +
Sbjct: 29 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIM 88
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAG 361
+ +HPN++ +GV T++ I+ E+ G L + L+ DG+ Q L R IAAG
Sbjct: 89 GQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQ-LVGMLRGIAAG 147
Query: 362 MNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA------WM 415
M YL +HRDL + N+L+ S K+SDFG R + ++ ++ + W
Sbjct: 148 MKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWT 207
Query: 416 APEVIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCP 474
APE I+ + + D+WSYGIV+WE+++ E PY D+ + +I + LP P CP
Sbjct: 208 APEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI-EQDYRLPPPMDCP 266
Query: 475 DGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
LM CW + RP F QI++ LD
Sbjct: 267 SALHQLMLDCWQKDRNHRPKFGQIVNTLD 295
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA------WMAPEVIRNEQCSDKIDIW 229
+L+ S K+SDFG R + ++ ++ + W APE I+ + + D+W
Sbjct: 166 ILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVW 224
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 134/261 (51%), Gaps = 14/261 (5%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVREQKET------DIRHLRKLN 307
EWE+P E++ ++ LG+G G V+ G VAVK +++ + + +++L
Sbjct: 3 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQ 62
Query: 308 HPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAGMNYL 365
H +V+ V TQ P Y I+ EY G L + LK G ++ +L + A QIA GM ++
Sbjct: 63 HQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 121
Query: 366 HSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRNE 423
+ IHR+L++ N+L+ KI+DFG R E N + + + W APE I
Sbjct: 122 EERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG 181
Query: 424 QCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMK 482
+ K D+WS+GI+L E++T PY + + +I + + P CP+ LM+
Sbjct: 182 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-ERGYRMVRPDNCPEELYQLMR 240
Query: 483 MCWSNAPSSRPSFKQILSHLD 503
+CW P RP+F + S L+
Sbjct: 241 LCWKERPEDRPTFDYLRSVLE 261
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ KI+DFG R E N + + + W APE I + K D+W
Sbjct: 136 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 190
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 140/283 (49%), Gaps = 30/283 (10%)
Query: 249 SFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-------VAVKKVREQKETDIR 301
S + DEWE+ E I+ L+ LG G+ G V+ G R I VAVK V E R
Sbjct: 5 SVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER 64
Query: 302 --------HLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK-------DGEEV 346
++ ++V+ GV ++ +VME A+G L + L+ +
Sbjct: 65 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 347 PP---QRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCRE-WNNK 402
PP Q + A +IA GM YL++K+ +HRDL + N ++ KI DFG R+ +
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETD 184
Query: 403 STKMSFAGT--VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWG 459
+ G V WMAPE +++ + D+WS+G+VLWE+ + E PY+ + + ++
Sbjct: 185 YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF 244
Query: 460 VGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHL 502
V +L P CP+ LM+MCW P RP+F +I++ L
Sbjct: 245 VMDGG-YLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 140/283 (49%), Gaps = 30/283 (10%)
Query: 249 SFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-------VAVKKVREQKETDIR 301
S + DEWE+ E I+ L+ LG G+ G V+ G R I VAVK V E R
Sbjct: 5 SVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER 64
Query: 302 --------HLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK-------DGEEV 346
++ ++V+ GV ++ +VME A+G L + L+ +
Sbjct: 65 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 347 PP---QRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCRE-WNNK 402
PP Q + A +IA GM YL++K+ +HRDL + N ++ KI DFG R+ +
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETA 184
Query: 403 STKMSFAGT--VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWG 459
+ G V WMAPE +++ + D+WS+G+VLWE+ + E PY+ + + ++
Sbjct: 185 YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF 244
Query: 460 VGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHL 502
V +L P CP+ LM+MCW P RP+F +I++ L
Sbjct: 245 VMDGG-YLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 135/260 (51%), Gaps = 13/260 (5%)
Query: 256 WEIPFESISDLQWLGSGAQGAVFSGKLR-SEIVAVKKVREQKET------DIRHLRKLNH 308
WEIP ESI ++ LG+G G V+ G S VAVK ++ + + ++ L H
Sbjct: 7 WEIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQH 66
Query: 309 PNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAGMNYLH 366
+V+ V T+ I+ E+ A G L + LK +G +V +L +++ QIA GM Y+
Sbjct: 67 DKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE 126
Query: 367 SKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRNEQ 424
K IHRDL++ NVL+ KI+DFG R E N + + + W APE I
Sbjct: 127 RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGC 186
Query: 425 CSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKM 483
+ K ++WS+GI+L+E++T + PY ++ ++ + S +P CPD +MKM
Sbjct: 187 FTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSAL-SQGYRMPRMENCPDELYDIMKM 245
Query: 484 CWSNAPSSRPSFKQILSHLD 503
CW RP+F + S LD
Sbjct: 246 CWKEKAEERPTFDYLQSVLD 265
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 138/294 (46%), Gaps = 35/294 (11%)
Query: 245 GEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKL------RSEIVAVKKVREQKET 298
G +F RD + + LQ LG G G+V + E+VAVKK++ E
Sbjct: 1 GSSGAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE 60
Query: 299 DIRH-------LRKLNHPNIVKFKGVCTQAP--CYCIVMEYCAYGPLYNLL-KDGEEVPP 348
+R L+ L H NIVK+KGVC A ++MEY YG L + L K E +
Sbjct: 61 HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH 120
Query: 349 QRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKST 404
+L + QI GM YL +K+ IHRDL + N+L+ ++ KI DFG + +
Sbjct: 121 IKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 180
Query: 405 KMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYK------------DVD 452
K + W APE + + S D+WS+G+VL+EL T K D
Sbjct: 181 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 240
Query: 453 SSAIIWG---VGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
I++ + ++ LP P CPD ++M CW+N + RPSF+ + +D
Sbjct: 241 GQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 294
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 137/283 (48%), Gaps = 30/283 (10%)
Query: 249 SFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-------VAVKKVREQKETDIR 301
S + DEWE+ E I+ L+ LG G+ G V+ G R I VAVK V E R
Sbjct: 2 SVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER 61
Query: 302 --------HLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK-------DGEEV 346
++ ++V+ GV ++ +VME A+G L + L+ +
Sbjct: 62 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 121
Query: 347 PP---QRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKS 403
PP Q + A +IA GM YL++K+ +HRDL + N ++ KI DFG R+
Sbjct: 122 PPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETD 181
Query: 404 TKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWG 459
V WMAPE +++ + D+WS+G+VLWE+ + E PY+ + + ++
Sbjct: 182 XXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF 241
Query: 460 VGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHL 502
V +L P CP+ LM+MCW P RP+F +I++ L
Sbjct: 242 VMDGG-YLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 283
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 136/287 (47%), Gaps = 35/287 (12%)
Query: 252 LRDEWEIPFESISDLQWLGSGAQGAVFSGKL------RSEIVAVKKVREQKETDIRH--- 302
+RD + + LQ LG G G+V + E+VAVKK++ E +R
Sbjct: 1 MRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 60
Query: 303 ----LRKLNHPNIVKFKGVCTQAP--CYCIVMEYCAYGPLYNLL-KDGEEVPPQRLYNWA 355
L+ L H NIVK+KGVC A ++MEY YG L + L K E + +L +
Sbjct: 61 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 120
Query: 356 RQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGT 411
QI GM YL +K+ IHRDL + N+L+ ++ KI DFG + + K
Sbjct: 121 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 180
Query: 412 VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYK------------DVDSSAIIWG 459
+ W APE + + S D+WS+G+VL+EL T K D I++
Sbjct: 181 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 240
Query: 460 ---VGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
+ ++ LP P CPD ++M CW+N + RPSF+ + +D
Sbjct: 241 LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 287
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 138/283 (48%), Gaps = 30/283 (10%)
Query: 249 SFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-------VAVKKVREQKETDIR 301
S + DEWE+ E I+ L+ LG G+ G V+ G R I VAVK V E R
Sbjct: 5 SVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER 64
Query: 302 --------HLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK-------DGEEV 346
++ ++V+ GV ++ +VME A+G L + L+ +
Sbjct: 65 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 347 PP---QRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKS 403
PP Q + A +IA GM YL++K+ +HRDL + N ++ KI DFG R+
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETD 184
Query: 404 TKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWG 459
V WMAPE +++ + D+WS+G+VLWE+ + E PY+ + + ++
Sbjct: 185 XXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF 244
Query: 460 VGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHL 502
V +L P CP+ LM+MCW P+ RP+F +I++ L
Sbjct: 245 VMDGG-YLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 286
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 137/290 (47%), Gaps = 35/290 (12%)
Query: 249 SFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKL------RSEIVAVKKVREQKETDIRH 302
+F RD + + LQ LG G G+V + E+VAVKK++ E +R
Sbjct: 2 AFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 61
Query: 303 -------LRKLNHPNIVKFKGVCTQAP--CYCIVMEYCAYGPLYNLL-KDGEEVPPQRLY 352
L+ L H NIVK+KGVC A ++MEY YG L + L K E + +L
Sbjct: 62 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 121
Query: 353 NWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSF 408
+ QI GM YL +K+ IHRDL + N+L+ ++ KI DFG + + K
Sbjct: 122 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 181
Query: 409 AGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYK------------DVDSSAI 456
+ W APE + + S D+WS+G+VL+EL T K D I
Sbjct: 182 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 241
Query: 457 IWG---VGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
++ + ++ LP P CPD ++M CW+N + RPSF+ + +D
Sbjct: 242 VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 291
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 137/283 (48%), Gaps = 30/283 (10%)
Query: 249 SFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-------VAVKKVREQKETDIR 301
S + DEWE+ E I+ L+ LG G+ G V+ G R I VAVK V E R
Sbjct: 5 SVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER 64
Query: 302 --------HLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK-------DGEEV 346
++ ++V+ GV ++ +VME A+G L + L+ +
Sbjct: 65 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 347 PP---QRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKS 403
PP Q + A +IA GM YL++K+ +HRDL + N ++ KI DFG R+
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETD 184
Query: 404 TKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWG 459
V WMAPE +++ + D+WS+G+VLWE+ + E PY+ + + ++
Sbjct: 185 XXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF 244
Query: 460 VGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHL 502
V +L P CP+ LM+MCW P RP+F +I++ L
Sbjct: 245 VMDGG-YLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 137/290 (47%), Gaps = 35/290 (12%)
Query: 249 SFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKL------RSEIVAVKKVREQKETDIRH 302
+F RD + + LQ LG G G+V + E+VAVKK++ E +R
Sbjct: 4 AFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 63
Query: 303 -------LRKLNHPNIVKFKGVCTQAP--CYCIVMEYCAYGPLYNLL-KDGEEVPPQRLY 352
L+ L H NIVK+KGVC A ++MEY YG L + L K E + +L
Sbjct: 64 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 123
Query: 353 NWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSF 408
+ QI GM YL +K+ IHRDL + N+L+ ++ KI DFG + + K
Sbjct: 124 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 183
Query: 409 AGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYK------------DVDSSAI 456
+ W APE + + S D+WS+G+VL+EL T K D I
Sbjct: 184 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 243
Query: 457 IWG---VGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
++ + ++ LP P CPD ++M CW+N + RPSF+ + +D
Sbjct: 244 VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 293
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 137/290 (47%), Gaps = 35/290 (12%)
Query: 249 SFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKL------RSEIVAVKKVREQKETDIRH 302
+F RD + + LQ LG G G+V + E+VAVKK++ E +R
Sbjct: 3 AFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 62
Query: 303 -------LRKLNHPNIVKFKGVCTQAP--CYCIVMEYCAYGPLYNLL-KDGEEVPPQRLY 352
L+ L H NIVK+KGVC A ++MEY YG L + L K E + +L
Sbjct: 63 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 122
Query: 353 NWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSF 408
+ QI GM YL +K+ IHRDL + N+L+ ++ KI DFG + + K
Sbjct: 123 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 182
Query: 409 AGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYK------------DVDSSAI 456
+ W APE + + S D+WS+G+VL+EL T K D I
Sbjct: 183 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 242
Query: 457 IWG---VGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
++ + ++ LP P CPD ++M CW+N + RPSF+ + +D
Sbjct: 243 VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 292
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 137/290 (47%), Gaps = 35/290 (12%)
Query: 249 SFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKL------RSEIVAVKKVREQKETDIRH 302
+F RD + + LQ LG G G+V + E+VAVKK++ E +R
Sbjct: 29 AFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 88
Query: 303 -------LRKLNHPNIVKFKGVCTQAP--CYCIVMEYCAYGPLYNLL-KDGEEVPPQRLY 352
L+ L H NIVK+KGVC A ++MEY YG L + L K E + +L
Sbjct: 89 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 148
Query: 353 NWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSF 408
+ QI GM YL +K+ IHRDL + N+L+ ++ KI DFG + + K
Sbjct: 149 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 208
Query: 409 AGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYK------------DVDSSAI 456
+ W APE + + S D+WS+G+VL+EL T K D I
Sbjct: 209 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 268
Query: 457 IWG---VGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
++ + ++ LP P CPD ++M CW+N + RPSF+ + +D
Sbjct: 269 VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 318
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 130/265 (49%), Gaps = 24/265 (9%)
Query: 269 LGSGAQGAVFSGKLR-----SEIVAVKKVR----EQKETDIRH----LRKLNHPNIVKFK 315
+GSG G V G+LR VA+K ++ E++ D + + +HPNI++ +
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 316 GVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAGMNYLHSKQIIHR 373
GV T+ IV EY G L L+ DG+ Q L R + AGM YL +HR
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQ-LVGMLRGVGAGMRYLSDLGYVHR 175
Query: 374 DLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVA--WMAPEVIRNEQCSDKI 429
DL + NVL+ S K+SDFG R E + + + G + W APE I S
Sbjct: 176 DLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSAS 235
Query: 430 DIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNA 488
D+WS+G+V+WE+L E PY ++ + +I V LP P CP LM CW
Sbjct: 236 DVWSFGVVMWEVLAYGERPYWNMTNRDVISSV-EEGYRLPAPMGCPHALHQLMLDCWHKD 294
Query: 489 PSSRPSFKQILSHLD--IASQEVLR 511
+ RP F QI+S LD I S E LR
Sbjct: 295 RAQRPRFSQIVSVLDALIRSPESLR 319
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVA--WMAPEVIRNEQCSDKIDIW 229
VL+ S K+SDFG R E + + + G + W APE I S D+W
Sbjct: 182 VLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVW 238
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 144/288 (50%), Gaps = 31/288 (10%)
Query: 245 GEFKSFV-LRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-------VAVKKVREQK 296
G F S V + DEWE+ E I+ L+ LG G+ G V+ G R I VAVK V E
Sbjct: 1 GVFPSSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA 60
Query: 297 ETDIR--------HLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK------- 341
R ++ ++V+ GV ++ +VME A+G L + L+
Sbjct: 61 SLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAE 120
Query: 342 DGEEVPP---QRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCRE 398
+ PP Q + A +IA GM YL++K+ +HR+L + N ++ KI DFG R+
Sbjct: 121 NNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRD 180
Query: 399 -WNNKSTKMSFAGT--VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSS 454
+ + G V WMAPE +++ + D+WS+G+VLWE+ + E PY+ + +
Sbjct: 181 IYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 240
Query: 455 AIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHL 502
++ V +L P CP+ LM+MCW P+ RP+F +I++ L
Sbjct: 241 QVLKFVMDGG-YLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 287
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 135/286 (47%), Gaps = 35/286 (12%)
Query: 253 RDEWEIPFESISDLQWLGSGAQGAVFSGKL------RSEIVAVKKVREQKETDIRH---- 302
RD + + LQ LG G G+V + E+VAVKK++ E +R
Sbjct: 5 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 64
Query: 303 ---LRKLNHPNIVKFKGVCTQAP--CYCIVMEYCAYGPLYNLL-KDGEEVPPQRLYNWAR 356
L+ L H NIVK+KGVC A ++MEY YG L + L K E + +L +
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 124
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTV 412
QI GM YL +K+ IHRDL + N+L+ ++ KI DFG + + K +
Sbjct: 125 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 184
Query: 413 AWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYK------------DVDSSAIIWG- 459
W APE + + S D+WS+G+VL+EL T K D I++
Sbjct: 185 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 244
Query: 460 --VGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
+ ++ LP P CPD ++M CW+N + RPSF+ + +D
Sbjct: 245 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 290
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 135/286 (47%), Gaps = 35/286 (12%)
Query: 253 RDEWEIPFESISDLQWLGSGAQGAVFSGKL------RSEIVAVKKVREQKETDIRH---- 302
RD + + LQ LG G G+V + E+VAVKK++ E +R
Sbjct: 1 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 60
Query: 303 ---LRKLNHPNIVKFKGVCTQAP--CYCIVMEYCAYGPLYNLL-KDGEEVPPQRLYNWAR 356
L+ L H NIVK+KGVC A ++MEY YG L + L K E + +L +
Sbjct: 61 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 120
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTV 412
QI GM YL +K+ IHRDL + N+L+ ++ KI DFG + + K +
Sbjct: 121 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 180
Query: 413 AWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYK------------DVDSSAIIWG- 459
W APE + + S D+WS+G+VL+EL T K D I++
Sbjct: 181 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 240
Query: 460 --VGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
+ ++ LP P CPD ++M CW+N + RPSF+ + +D
Sbjct: 241 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 286
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 130/265 (49%), Gaps = 24/265 (9%)
Query: 269 LGSGAQGAVFSGKLR-----SEIVAVKKVR----EQKETDIRH----LRKLNHPNIVKFK 315
+GSG G V G+LR VA+K ++ E++ D + + +HPNI++ +
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 316 GVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAGMNYLHSKQIIHR 373
GV T+ IV EY G L L+ DG+ Q L R + AGM YL +HR
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQ-LVGMLRGVGAGMRYLSDLGYVHR 175
Query: 374 DLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVA--WMAPEVIRNEQCSDKI 429
DL + NVL+ S K+SDFG R E + + + G + W APE I S
Sbjct: 176 DLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSAS 235
Query: 430 DIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNA 488
D+WS+G+V+WE+L E PY ++ + +I V LP P CP LM CW
Sbjct: 236 DVWSFGVVMWEVLAYGERPYWNMTNRDVISSV-EEGYRLPAPMGCPHALHQLMLDCWHKD 294
Query: 489 PSSRPSFKQILSHLD--IASQEVLR 511
+ RP F QI+S LD I S E LR
Sbjct: 295 RAQRPRFSQIVSVLDALIRSPESLR 319
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVA--WMAPEVIRNEQCSDKIDIW 229
VL+ S K+SDFG R E + + + G + W APE I S D+W
Sbjct: 182 VLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVW 238
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 137/290 (47%), Gaps = 35/290 (12%)
Query: 249 SFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKL------RSEIVAVKKVREQKETDIRH 302
+F RD + + LQ LG G G+V + E+VAVKK++ E +R
Sbjct: 1 AFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 60
Query: 303 -------LRKLNHPNIVKFKGVCTQAP--CYCIVMEYCAYGPLYNLLK-DGEEVPPQRLY 352
L+ L H NIVK+KGVC A ++MEY YG L + L+ E + +L
Sbjct: 61 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLL 120
Query: 353 NWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSF 408
+ QI GM YL +K+ IHRDL + N+L+ ++ KI DFG + + K
Sbjct: 121 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 180
Query: 409 AGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYK------------DVDSSAI 456
+ W APE + + S D+WS+G+VL+EL T K D I
Sbjct: 181 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 240
Query: 457 IWG---VGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
++ + ++ LP P CPD ++M CW+N + RPSF+ + +D
Sbjct: 241 VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 290
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/263 (32%), Positives = 134/263 (50%), Gaps = 14/263 (5%)
Query: 253 RDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVR------EQKETDIRHLRK 305
+D WEIP ES+ LG G G V+ G VA+K ++ E + + ++K
Sbjct: 10 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKK 69
Query: 306 LNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKD--GEEVPPQRLYNWARQIAAGMN 363
L H +V+ V ++ P Y IVMEY + G L + LK G+ + +L + A QIA+GM
Sbjct: 70 LRHEKLVQLYAVVSEEPIY-IVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIR 421
Y+ +HRDL++ N+L+G K++DFG R E N + + + W APE
Sbjct: 129 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 188
Query: 422 NEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLL 480
+ + K D+WS+GI+L EL T PY + + ++ V +P P CP+ L
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPESLHDL 247
Query: 481 MKMCWSNAPSSRPSFKQILSHLD 503
M CW P RP+F+ + + L+
Sbjct: 248 MCQCWRKDPEERPTFEYLQAFLE 270
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+G K++DFG R E N + + + W APE + + K D+W
Sbjct: 145 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 140/266 (52%), Gaps = 20/266 (7%)
Query: 257 EIPFESISDLQWLGSGAQGAVFSGKLR----SEI-VAVKKVR----EQKETDIRH----L 303
E+ +IS + +G+G G V SG+L+ EI VA+K ++ E++ D +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLL-KDGEEVPPQRLYNWARQIAAGM 362
+ +HPNI++ +GV T++ IV EY G L + L K + +L R IA+GM
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 363 NYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVA--WMAPE 418
YL +HRDL + N+LI S K+SDFG R E + ++ + G + W +PE
Sbjct: 161 KYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
I + + D+WSYGIVLWE+++ E PY ++ + +I V LP P CP
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV-DEGYRLPPPMDCPAAL 279
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLD 503
LM CW ++RP F+QI+S LD
Sbjct: 280 YQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 141/283 (49%), Gaps = 30/283 (10%)
Query: 249 SFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-------VAVKKVREQKETDIR 301
S + DEWE+ E I+ L+ LG G+ G V+ G R I VAVK V E R
Sbjct: 5 SVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER 64
Query: 302 --------HLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK-------DGEEV 346
++ ++V+ GV ++ +VME A+G L + L+ +
Sbjct: 65 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 347 PP---QRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCRE-WNNK 402
PP Q + A +IA GM YL++K+ +HR+L + N ++ KI DFG R+ +
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETD 184
Query: 403 STKMSFAGT--VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWG 459
+ G V WMAPE +++ + D+WS+G+VLWE+ + E PY+ + + ++
Sbjct: 185 YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF 244
Query: 460 VGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHL 502
V +L P CP+ LM+MCW P+ RP+F +I++ L
Sbjct: 245 VMDGG-YLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 286
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 131/273 (47%), Gaps = 35/273 (12%)
Query: 266 LQWLGSGAQGAVFSGKL------RSEIVAVKKVREQKETDIRH-------LRKLNHPNIV 312
LQ LG G G+V + E+VAVKK++ E +R L+ L H NIV
Sbjct: 13 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 72
Query: 313 KFKGVCTQAP--CYCIVMEYCAYGPLYNLL-KDGEEVPPQRLYNWARQIAAGMNYLHSKQ 369
K+KGVC A ++MEY YG L + L K E + +L + QI GM YL +K+
Sbjct: 73 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 132
Query: 370 IIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQC 425
IHRDL + N+L+ ++ KI DFG + + K + W APE + +
Sbjct: 133 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 192
Query: 426 SDKIDIWSYGIVLWELLTCETPYK------------DVDSSAIIWG---VGSSSLHLPIP 470
S D+WS+G+VL+EL T K D I++ + ++ LP P
Sbjct: 193 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP 252
Query: 471 STCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
CPD ++M CW+N + RPSF+ + +D
Sbjct: 253 DGCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 285
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 134/263 (50%), Gaps = 14/263 (5%)
Query: 253 RDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVR------EQKETDIRHLRK 305
+D WEIP ES+ LG G G V+ G VA+K ++ E + + ++K
Sbjct: 10 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKK 69
Query: 306 LNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKD--GEEVPPQRLYNWARQIAAGMN 363
L H +V+ V ++ P Y IV+EY + G L + LK G+ + +L + A QIA+GM
Sbjct: 70 LRHEKLVQLYAVVSEEPIY-IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIR 421
Y+ +HRDL++ N+L+G K++DFG R E N + + + W APE
Sbjct: 129 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAAL 188
Query: 422 NEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLL 480
+ + K D+WS+GI+L EL T PY + + ++ V +P P CP+ L
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPESLHDL 247
Query: 481 MKMCWSNAPSSRPSFKQILSHLD 503
M CW P RP+F+ + + L+
Sbjct: 248 MCQCWRKDPEERPTFEYLQAFLE 270
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+G K++DFG R E N + + + W APE + + K D+W
Sbjct: 145 ILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 140/266 (52%), Gaps = 20/266 (7%)
Query: 257 EIPFESISDLQWLGSGAQGAVFSGKLR----SEI-VAVKKVR----EQKETDIRH----L 303
E+ +IS + +G+G G V SG+L+ EI VA+K ++ E++ D +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLL-KDGEEVPPQRLYNWARQIAAGM 362
+ +HPNI++ +GV T++ IV EY G L + L K + +L R IA+GM
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 363 NYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVA--WMAPE 418
YL +HRDL + N+LI S K+SDFG R E + ++ + G + W +PE
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
I + + D+WSYGIVLWE+++ E PY ++ + +I V LP P CP
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV-DEGYRLPPPMDCPAAL 279
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLD 503
LM CW ++RP F+QI+S LD
Sbjct: 280 YQLMLDCWQKDRNNRPKFEQIVSILD 305
Score = 28.9 bits (63), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVA--WMAPEVIRNEQCSDKIDIW 229
+LI S K+SDFG R E + ++ + G + W +PE I + + D+W
Sbjct: 178 ILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVW 234
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 137/271 (50%), Gaps = 19/271 (7%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFSGKLRSE-----IVAVK--------KVREQKETDIR 301
++EI E I + +G G G V G S VA+K VRE+ +
Sbjct: 384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 443
Query: 302 HLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGE-EVPPQRLYNWARQIAA 360
+R+ +HP+IVK GV T+ P + I+ME C G L + L+ + + L +A Q++
Sbjct: 444 TMRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLST 502
Query: 361 GMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT--VAWMAPE 418
+ YL SK+ +HRD+ + NVL+ S + K+ DFG R + + + G + WMAPE
Sbjct: 503 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 562
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
I + + D+W +G+ +WE+L P++ V ++ +I G + LP+P CP
Sbjct: 563 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI-GRIENGERLPMPPNCPPTL 621
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
LM CW+ PS RP F ++ + L +E
Sbjct: 622 YSLMTKCWAYDPSRRPRFTELKAQLSTILEE 652
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGT--VAWMAPEVIRNEQCSDKIDIW 229
VL+ S + K+ DFG R + + + G + WMAPE I + + D+W
Sbjct: 522 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVW 576
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 133/269 (49%), Gaps = 24/269 (8%)
Query: 257 EIPFESISDLQWLGSGAQGAVFSGKL-----RSEIVAVKKVR----EQKETDIRH----L 303
EI + Q +G+G G V SG L R VA+K ++ E++ D +
Sbjct: 3 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIM 62
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAG 361
+ +HPN++ +GV T++ I+ E+ G L + L+ DG+ Q L R IAAG
Sbjct: 63 GQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQ-LVGMLRGIAAG 121
Query: 362 MNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA------WM 415
M YL +HR L + N+L+ S K+SDFG R + ++ ++ + W
Sbjct: 122 MKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWT 181
Query: 416 APEVIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCP 474
APE I+ + + D+WSYGIV+WE+++ E PY D+ + +I + LP P CP
Sbjct: 182 APEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI-EQDYRLPPPMDCP 240
Query: 475 DGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
LM CW + RP F QI++ LD
Sbjct: 241 SALHQLMLDCWQKDRNHRPKFGQIVNTLD 269
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA------WMAPEVIRNEQCSDKIDIW 229
+L+ S K+SDFG R + ++ ++ + W APE I+ + + D+W
Sbjct: 140 ILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVW 198
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 139/274 (50%), Gaps = 23/274 (8%)
Query: 251 VLRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI------VAVKKVR----EQKETDI 300
VL+ EI ++ + +G+G G V+ G L++ VA+K ++ E++ D
Sbjct: 34 VLKFTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDF 93
Query: 301 RH----LRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLL--KDGEEVPPQRLYNW 354
+ + +H NI++ +GV ++ I+ EY G L L KDGE Q L
Sbjct: 94 LGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQ-LVGM 152
Query: 355 ARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTV 412
R IAAGM YL + +HRDL + N+L+ S K+SDFG R E + ++T + G +
Sbjct: 153 LRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKI 212
Query: 413 A--WMAPEVIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPI 469
W APE I + + D+WS+GIV+WE++T E PY ++ + ++ + + LP
Sbjct: 213 PIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAI-NDGFRLPT 271
Query: 470 PSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
P CP LM CW + RP F I+S LD
Sbjct: 272 PMDCPSAIYQLMMQCWQQERARRPKFADIVSILD 305
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVA--WMAPEVIRNEQCSDKIDIW 229
+L+ S K+SDFG R E + ++T + G + W APE I + + D+W
Sbjct: 178 ILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVW 234
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 131/273 (47%), Gaps = 35/273 (12%)
Query: 266 LQWLGSGAQGAVFSGKL------RSEIVAVKKVREQKETDIRH-------LRKLNHPNIV 312
LQ LG G G+V + E+VAVKK++ E +R L+ L H NIV
Sbjct: 33 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 92
Query: 313 KFKGVCTQAP--CYCIVMEYCAYGPLYNLL-KDGEEVPPQRLYNWARQIAAGMNYLHSKQ 369
K+KGVC A ++MEY YG L + L K E + +L + QI GM YL +K+
Sbjct: 93 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 152
Query: 370 IIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQC 425
IHRDL + N+L+ ++ KI DFG + + K + W APE + +
Sbjct: 153 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 212
Query: 426 SDKIDIWSYGIVLWELLTCETPYK------------DVDSSAIIWG---VGSSSLHLPIP 470
S D+WS+G+VL+EL T K D I++ + ++ LP P
Sbjct: 213 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP 272
Query: 471 STCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
CPD ++M CW+N + RPSF+ + +D
Sbjct: 273 DGCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 305
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 131/273 (47%), Gaps = 35/273 (12%)
Query: 266 LQWLGSGAQGAVFSGKL------RSEIVAVKKVREQKETDIRH-------LRKLNHPNIV 312
LQ LG G G+V + E+VAVKK++ E +R L+ L H NIV
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 74
Query: 313 KFKGVCTQAP--CYCIVMEYCAYGPLYNLL-KDGEEVPPQRLYNWARQIAAGMNYLHSKQ 369
K+KGVC A ++MEY YG L + L K E + +L + QI GM YL +K+
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 134
Query: 370 IIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQC 425
IHRDL + N+L+ ++ KI DFG + + K + W APE + +
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 194
Query: 426 SDKIDIWSYGIVLWELLTCETPYK------------DVDSSAIIWG---VGSSSLHLPIP 470
S D+WS+G+VL+EL T K D I++ + ++ LP P
Sbjct: 195 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP 254
Query: 471 STCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
CPD ++M CW+N + RPSF+ + +D
Sbjct: 255 DGCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 287
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 140/266 (52%), Gaps = 20/266 (7%)
Query: 257 EIPFESISDLQWLGSGAQGAVFSGKLR----SEI-VAVKKVR----EQKETDIRH----L 303
E+ +IS + +G+G G V SG+L+ EI VA+K ++ E++ D +
Sbjct: 39 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 98
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLL-KDGEEVPPQRLYNWARQIAAGM 362
+ +HPNI++ +GV T++ IV EY G L + L K + +L R IA+GM
Sbjct: 99 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 158
Query: 363 NYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVA--WMAPE 418
YL +HRDL + N+LI S K+SDFG R E + ++ + G + W +PE
Sbjct: 159 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 218
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
I + + D+WSYGIVLWE+++ E PY ++ + +I V LP P CP
Sbjct: 219 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV-DEGYRLPPPMDCPAAL 277
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLD 503
LM CW ++RP F+QI+S LD
Sbjct: 278 YQLMLDCWQKDRNNRPKFEQIVSILD 303
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 140/266 (52%), Gaps = 20/266 (7%)
Query: 257 EIPFESISDLQWLGSGAQGAVFSGKLR----SEI-VAVKKVR----EQKETDIRH----L 303
E+ +IS + +G+G G V SG+L+ EI VA+K ++ E++ D +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLL-KDGEEVPPQRLYNWARQIAAGM 362
+ +HPNI++ +GV T++ IV EY G L + L K + +L R IA+GM
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 363 NYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVA--WMAPE 418
YL +HRDL + N+LI S K+SDFG R E + ++ + G + W +PE
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
I + + D+WSYGIVLWE+++ E PY ++ + +I V LP P CP
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV-DEGYRLPPPMDCPAAL 279
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLD 503
LM CW ++RP F+QI+S LD
Sbjct: 280 YQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 134/263 (50%), Gaps = 14/263 (5%)
Query: 253 RDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVR------EQKETDIRHLRK 305
+D WEIP ES+ LG G G V+ G VA+K ++ E + + ++K
Sbjct: 10 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKK 69
Query: 306 LNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKD--GEEVPPQRLYNWARQIAAGMN 363
L H +V+ V ++ P Y IV+EY + G L + LK G+ + +L + A QIA+GM
Sbjct: 70 LRHEKLVQLYAVVSEEPIY-IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIR 421
Y+ +HRDL++ N+L+G K++DFG R E N + + + W APE
Sbjct: 129 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 188
Query: 422 NEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLL 480
+ + K D+WS+GI+L EL T PY + + ++ V +P P CP+ L
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPESLHDL 247
Query: 481 MKMCWSNAPSSRPSFKQILSHLD 503
M CW P RP+F+ + + L+
Sbjct: 248 MCQCWRKDPEERPTFEYLQAFLE 270
Score = 32.0 bits (71), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+G K++DFG R E N + + + W APE + + K D+W
Sbjct: 145 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 140/266 (52%), Gaps = 20/266 (7%)
Query: 257 EIPFESISDLQWLGSGAQGAVFSGKLR----SEI-VAVKKVR----EQKETDIRH----L 303
E+ +IS + +G+G G V SG+L+ EI VA+K ++ E++ D +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLL-KDGEEVPPQRLYNWARQIAAGM 362
+ +HPNI++ +GV T++ IV EY G L + L K + +L R IA+GM
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 363 NYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVA--WMAPE 418
YL +HRDL + N+LI S K+SDFG R E + ++ + G + W +PE
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
I + + D+WSYGIVLWE+++ E PY ++ + +I V LP P CP
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV-DEGYRLPPPMDCPAAL 279
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLD 503
LM CW ++RP F+QI+S LD
Sbjct: 280 YQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 140/266 (52%), Gaps = 20/266 (7%)
Query: 257 EIPFESISDLQWLGSGAQGAVFSGKLR----SEI-VAVKKVR----EQKETDIRH----L 303
E+ +IS + +G+G G V SG+L+ EI VA+K ++ E++ D +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLL-KDGEEVPPQRLYNWARQIAAGM 362
+ +HPNI++ +GV T++ IV EY G L + L K + +L R IA+GM
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 363 NYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVA--WMAPE 418
YL +HRDL + N+LI S K+SDFG R E + ++ + G + W +PE
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
I + + D+WSYGIVLWE+++ E PY ++ + +I V LP P CP
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV-DEGYRLPPPMDCPAAL 279
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLD 503
LM CW ++RP F+QI+S LD
Sbjct: 280 YQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 137/271 (50%), Gaps = 19/271 (7%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFSGKLRSE-----IVAVK--------KVREQKETDIR 301
++EI E I + +G G G V G S VA+K VRE+ +
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 302 HLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGE-EVPPQRLYNWARQIAA 360
+R+ +HP+IVK GV T+ P + I+ME C G L + L+ + + L +A Q++
Sbjct: 64 TMRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLST 122
Query: 361 GMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT--VAWMAPE 418
+ YL SK+ +HRD+ + NVL+ S + K+ DFG R + + + G + WMAPE
Sbjct: 123 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPE 182
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
I + + D+W +G+ +WE+L P++ V ++ +I G + LP+P CP
Sbjct: 183 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI-GRIENGERLPMPPNCPPTL 241
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
LM CW+ PS RP F ++ + L +E
Sbjct: 242 YSLMTKCWAYDPSRRPRFTELKAQLSTILEE 272
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGT--VAWMAPEVIRNEQCSDKIDIW 229
VL+ S + K+ DFG R + + + G + WMAPE I + + D+W
Sbjct: 142 VLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVW 196
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 131/273 (47%), Gaps = 35/273 (12%)
Query: 266 LQWLGSGAQGAVFSGKL------RSEIVAVKKVREQKETDIRH-------LRKLNHPNIV 312
LQ LG G G+V + E+VAVKK++ E +R L+ L H NIV
Sbjct: 33 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 92
Query: 313 KFKGVCTQAP--CYCIVMEYCAYGPLYNLL-KDGEEVPPQRLYNWARQIAAGMNYLHSKQ 369
K+KGVC A ++MEY YG L + L K E + +L + QI GM YL +K+
Sbjct: 93 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 152
Query: 370 IIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQC 425
IHRDL + N+L+ ++ KI DFG + + K + W APE + +
Sbjct: 153 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 212
Query: 426 SDKIDIWSYGIVLWELLTCETPYK------------DVDSSAIIWG---VGSSSLHLPIP 470
S D+WS+G+VL+EL T K D I++ + ++ LP P
Sbjct: 213 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP 272
Query: 471 STCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
CPD ++M CW+N + RPSF+ + +D
Sbjct: 273 DGCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 305
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 140/266 (52%), Gaps = 20/266 (7%)
Query: 257 EIPFESISDLQWLGSGAQGAVFSGKLR----SEI-VAVKKVR----EQKETDIRH----L 303
E+ +IS + +G+G G V SG+L+ EI VA+K ++ E++ D +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLL-KDGEEVPPQRLYNWARQIAAGM 362
+ +HPNI++ +GV T++ IV EY G L + L K + +L R IA+GM
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 363 NYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVA--WMAPE 418
YL +HRDL + N+LI S K+SDFG R E + ++ + G + W +PE
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
I + + D+WSYGIVLWE+++ E PY ++ + +I V LP P CP
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV-DEGYRLPPPMDCPAAL 279
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLD 503
LM CW ++RP F+QI+S LD
Sbjct: 280 YQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 135/278 (48%), Gaps = 30/278 (10%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-------VAVKKVREQKETDIR----- 301
DEWE+ E I+ + LG G+ G V+ G + + VA+K V E R
Sbjct: 40 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 99
Query: 302 ---HLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE--------VPPQ- 349
+++ N ++V+ GV +Q ++ME G L + L+ PP
Sbjct: 100 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 159
Query: 350 -RLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCRE-WNNKSTKMS 407
++ A +IA GM YL++ + +HRDL + N ++ KI DFG R+ + +
Sbjct: 160 SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 219
Query: 408 FAGT--VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSS 464
G V WM+PE +++ + D+WS+G+VLWE+ T E PY+ + + ++ V
Sbjct: 220 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG 279
Query: 465 LHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHL 502
L L P CPD LM+MCW P RPSF +I+S +
Sbjct: 280 L-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 316
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 135/278 (48%), Gaps = 30/278 (10%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-------VAVKKVREQKETDIR----- 301
DEWE+ E I+ + LG G+ G V+ G + + VA+K V E R
Sbjct: 9 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 68
Query: 302 ---HLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE--------VPPQ- 349
+++ N ++V+ GV +Q ++ME G L + L+ PP
Sbjct: 69 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 128
Query: 350 -RLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCRE-WNNKSTKMS 407
++ A +IA GM YL++ + +HRDL + N ++ KI DFG R+ + +
Sbjct: 129 SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 188
Query: 408 FAGT--VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSS 464
G V WM+PE +++ + D+WS+G+VLWE+ T E PY+ + + ++ V
Sbjct: 189 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG 248
Query: 465 LHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHL 502
L L P CPD LM+MCW P RPSF +I+S +
Sbjct: 249 L-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 285
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 135/278 (48%), Gaps = 30/278 (10%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-------VAVKKVREQKETDIR----- 301
DEWE+ E I+ + LG G+ G V+ G + + VA+K V E R
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 70
Query: 302 ---HLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE--------VPPQ- 349
+++ N ++V+ GV +Q ++ME G L + L+ PP
Sbjct: 71 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 130
Query: 350 -RLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCRE-WNNKSTKMS 407
++ A +IA GM YL++ + +HRDL + N ++ KI DFG R+ + +
Sbjct: 131 SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 190
Query: 408 FAGT--VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSS 464
G V WM+PE +++ + D+WS+G+VLWE+ T E PY+ + + ++ V
Sbjct: 191 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG 250
Query: 465 LHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHL 502
L L P CPD LM+MCW P RPSF +I+S +
Sbjct: 251 L-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 287
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 132/281 (46%), Gaps = 36/281 (12%)
Query: 257 EIPFESISDLQWLGSGAQGAVFSGKL-------RSEIVAVKKVREQKETDIRH------- 302
EI ++ ++ LG G V+ G L +++ VA+K ++++ E +R
Sbjct: 22 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAM 81
Query: 303 LR-KLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLL------------KDGEEVP-- 347
LR +L HPN+V GV T+ ++ YC++G L+ L D V
Sbjct: 82 LRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSA 141
Query: 348 --PQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTK 405
P + QIAAGM YL S ++H+DL + NVL+ K KISD G RE
Sbjct: 142 LEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYY 201
Query: 406 MSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVG 461
+ + WMAPE I + S DIWSYG+VLWE+ + PY + ++ +
Sbjct: 202 KLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIR 261
Query: 462 SSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHL 502
+ + LP P CP LM CW+ PS RP FK I S L
Sbjct: 262 NRQV-LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRL 301
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIW 229
VL+ K KISD G RE + + WMAPE I + S DIW
Sbjct: 176 VLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIW 231
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 135/278 (48%), Gaps = 30/278 (10%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-------VAVKKVREQKETDIR----- 301
DEWE+ E I+ + LG G+ G V+ G + + VA+K V E R
Sbjct: 8 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 67
Query: 302 ---HLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV--------PPQ- 349
+++ N ++V+ GV +Q ++ME G L + L+ PP
Sbjct: 68 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL 127
Query: 350 -RLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCRE-WNNKSTKMS 407
++ A +IA GM YL++ + +HRDL + N ++ KI DFG R+ + +
Sbjct: 128 SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 187
Query: 408 FAGT--VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSS 464
G V WM+PE +++ + D+WS+G+VLWE+ T E PY+ + + ++ V
Sbjct: 188 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG 247
Query: 465 LHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHL 502
L L P CPD LM+MCW P RPSF +I+S +
Sbjct: 248 L-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 284
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 136/267 (50%), Gaps = 22/267 (8%)
Query: 257 EIPFESISDLQWLGSGAQGAVFSGKL-----RSEIVAVKKVR----EQKETDIRH----L 303
EI I+ + +G+G G V SG+L R VA+K ++ E++ D +
Sbjct: 18 EIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIM 77
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAG 361
+ +HPNI+ +GV T++ IV EY G L LK DG+ Q L R I+AG
Sbjct: 78 GQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQ-LVGMLRGISAG 136
Query: 362 MNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVA--WMAP 417
M YL +HRDL + N+LI S K+SDFG R E + ++ + G + W AP
Sbjct: 137 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAP 196
Query: 418 EVIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDG 476
E I + + D+WSYGIV+WE+++ E PY ++ + +I V LP P CP
Sbjct: 197 EAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAV-EEGYRLPSPMDCPAA 255
Query: 477 FQLLMKMCWSNAPSSRPSFKQILSHLD 503
LM CW +SRP F +I++ LD
Sbjct: 256 LYQLMLDCWQKERNSRPKFDEIVNMLD 282
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVA--WMAPEVIRNEQCSDKIDIW 229
+LI S K+SDFG R E + ++ + G + W APE I + + D+W
Sbjct: 155 ILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVW 211
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 140/266 (52%), Gaps = 20/266 (7%)
Query: 257 EIPFESISDLQWLGSGAQGAVFSGKLR----SEI-VAVKKVR----EQKETDIRH----L 303
E+ +IS + +G+G G V SG+L+ EI VA+K ++ E++ D +
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLL-KDGEEVPPQRLYNWARQIAAGM 362
+ +HPNI++ +GV T++ IV EY G L + L K + +L R IA+GM
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 131
Query: 363 NYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVA--WMAPE 418
YL +HRDL + N+LI S K+SDFG R E + ++ + G + W +PE
Sbjct: 132 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 191
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
I + + D+WSYGIVLWE+++ E PY ++ + +I V LP P CP
Sbjct: 192 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV-DEGYRLPPPMDCPAAL 250
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLD 503
LM CW ++RP F+QI+S LD
Sbjct: 251 YQLMLDCWQKDRNNRPKFEQIVSILD 276
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 135/278 (48%), Gaps = 30/278 (10%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-------VAVKKVREQKETDIR----- 301
DEWE+ E I+ + LG G+ G V+ G + + VA+K V E R
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 71
Query: 302 ---HLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE--------VPPQ- 349
+++ N ++V+ GV +Q ++ME G L + L+ PP
Sbjct: 72 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 131
Query: 350 -RLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCRE-WNNKSTKMS 407
++ A +IA GM YL++ + +HRDL + N ++ KI DFG R+ + +
Sbjct: 132 SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 191
Query: 408 FAGT--VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSS 464
G V WM+PE +++ + D+WS+G+VLWE+ T E PY+ + + ++ V
Sbjct: 192 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG 251
Query: 465 LHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHL 502
L L P CPD LM+MCW P RPSF +I+S +
Sbjct: 252 L-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 288
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 135/278 (48%), Gaps = 30/278 (10%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-------VAVKKVREQKETDIR----- 301
DEWE+ E I+ + LG G+ G V+ G + + VA+K V E R
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 77
Query: 302 ---HLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE--------VPPQ- 349
+++ N ++V+ GV +Q ++ME G L + L+ PP
Sbjct: 78 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 137
Query: 350 -RLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCRE-WNNKSTKMS 407
++ A +IA GM YL++ + +HRDL + N ++ KI DFG R+ + +
Sbjct: 138 SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 197
Query: 408 FAGT--VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSS 464
G V WM+PE +++ + D+WS+G+VLWE+ T E PY+ + + ++ V
Sbjct: 198 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG 257
Query: 465 LHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHL 502
L L P CPD LM+MCW P RPSF +I+S +
Sbjct: 258 L-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 294
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 140/266 (52%), Gaps = 20/266 (7%)
Query: 257 EIPFESISDLQWLGSGAQGAVFSGKLR----SEI-VAVKKVR----EQKETDIRH----L 303
E+ +IS + +G+G G V SG+L+ EI VA+K ++ E++ D +
Sbjct: 29 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 88
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLL-KDGEEVPPQRLYNWARQIAAGM 362
+ +HPNI++ +GV T++ IV EY G L + L K + +L R IA+GM
Sbjct: 89 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 148
Query: 363 NYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVA--WMAPE 418
YL +HRDL + N+LI S K+SDFG R E + ++ + G + W +PE
Sbjct: 149 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 208
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
I + + D+WSYGIVLWE+++ E PY ++ + +I V LP P CP
Sbjct: 209 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV-DEGYRLPPPMDCPAAL 267
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLD 503
LM CW ++RP F+QI+S LD
Sbjct: 268 YQLMLDCWQKDRNNRPKFEQIVSILD 293
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 140/266 (52%), Gaps = 20/266 (7%)
Query: 257 EIPFESISDLQWLGSGAQGAVFSGKLR----SEI-VAVKKVR----EQKETDIRH----L 303
E+ +IS + +G+G G V SG+L+ EI VA+K ++ E++ D +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLL-KDGEEVPPQRLYNWARQIAAGM 362
+ +HPNI++ +GV T++ IV EY G L + L K + +L R IA+GM
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 363 NYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVA--WMAPE 418
YL +HRDL + N+LI S K+SDFG R E + ++ + G + W +PE
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
I + + D+WSYGIVLWE+++ E PY ++ + +I V LP P CP
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV-DEGYRLPPPMDCPAAL 279
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLD 503
LM CW ++RP F+QI+S LD
Sbjct: 280 YQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 135/278 (48%), Gaps = 30/278 (10%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-------VAVKKVREQKETDIR----- 301
DEWE+ E I+ + LG G+ G V+ G + + VA+K V E R
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 302 ---HLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE--------VPPQ- 349
+++ N ++V+ GV +Q ++ME G L + L+ PP
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 350 -RLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCRE-WNNKSTKMS 407
++ A +IA GM YL++ + +HRDL + N ++ KI DFG R+ + +
Sbjct: 125 SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 184
Query: 408 FAGT--VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSS 464
G V WM+PE +++ + D+WS+G+VLWE+ T E PY+ + + ++ V
Sbjct: 185 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG 244
Query: 465 LHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHL 502
L L P CPD LM+MCW P RPSF +I+S +
Sbjct: 245 L-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 281
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 132/285 (46%), Gaps = 44/285 (15%)
Query: 257 EIPFESISDLQWLGSGAQGAVFSGKLRS-------EIVAVKKVREQKETDIRH------- 302
E P +I ++ +G GA G VF + +VAVK ++E+ D++
Sbjct: 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA 102
Query: 303 -LRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKD------------------- 342
+ + ++PNIVK GVC C++ EY AYG L L+
Sbjct: 103 LMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRAR 162
Query: 343 -GEEVPP----QRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR 397
PP ARQ+AAGM YL ++ +HRDL + N L+G KI+DFG R
Sbjct: 163 VSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSR 222
Query: 398 EWNNKS---TKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCET-PYKDVDS 453
+ + A + WM PE I + + + D+W+YG+VLWE+ + PY +
Sbjct: 223 NIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH 282
Query: 454 SAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQI 498
+I+ V ++ L P CP LM++CWS P+ RPSF I
Sbjct: 283 EEVIYYVRDGNI-LACPENCPLELYNLMRLCWSKLPADRPSFCSI 326
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 135/278 (48%), Gaps = 30/278 (10%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-------VAVKKVREQKETDIR----- 301
DEWE+ E I+ + LG G+ G V+ G + + VA+K V E R
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 70
Query: 302 ---HLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE--------VPPQ- 349
+++ N ++V+ GV +Q ++ME G L + L+ PP
Sbjct: 71 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 130
Query: 350 -RLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCRE-WNNKSTKMS 407
++ A +IA GM YL++ + +HRDL + N ++ KI DFG R+ + +
Sbjct: 131 SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 190
Query: 408 FAGT--VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSS 464
G V WM+PE +++ + D+WS+G+VLWE+ T E PY+ + + ++ V
Sbjct: 191 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG 250
Query: 465 LHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHL 502
L L P CPD LM+MCW P RPSF +I+S +
Sbjct: 251 L-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 287
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 133/263 (50%), Gaps = 14/263 (5%)
Query: 253 RDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVR------EQKETDIRHLRK 305
+D WEIP ES+ LG G G V+ G VA+K ++ E + + ++K
Sbjct: 3 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKK 62
Query: 306 LNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKD--GEEVPPQRLYNWARQIAAGMN 363
L H +V+ V ++ P Y IV EY + G L + LK G+ + +L + A QIA+GM
Sbjct: 63 LRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 121
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIR 421
Y+ +HRDL++ N+L+G K++DFG R E N + + + W APE
Sbjct: 122 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 181
Query: 422 NEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLL 480
+ + K D+WS+GI+L EL T PY + + ++ V +P P CP+ L
Sbjct: 182 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPESLHDL 240
Query: 481 MKMCWSNAPSSRPSFKQILSHLD 503
M CW P RP+F+ + + L+
Sbjct: 241 MCQCWRKEPEERPTFEYLQAFLE 263
Score = 32.0 bits (71), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+G K++DFG R E N + + + W APE + + K D+W
Sbjct: 138 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 192
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 135/278 (48%), Gaps = 30/278 (10%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-------VAVKKVREQKETDIR----- 301
DEWE+ E I+ + LG G+ G V+ G + + VA+K V E R
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 77
Query: 302 ---HLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV--------PPQ- 349
+++ N ++V+ GV +Q ++ME G L + L+ PP
Sbjct: 78 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL 137
Query: 350 -RLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCRE-WNNKSTKMS 407
++ A +IA GM YL++ + +HRDL + N ++ KI DFG R+ + +
Sbjct: 138 SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 197
Query: 408 FAGT--VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSS 464
G V WM+PE +++ + D+WS+G+VLWE+ T E PY+ + + ++ V
Sbjct: 198 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG 257
Query: 465 LHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHL 502
L L P CPD LM+MCW P RPSF +I+S +
Sbjct: 258 L-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 294
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 132/281 (46%), Gaps = 36/281 (12%)
Query: 257 EIPFESISDLQWLGSGAQGAVFSGKL-------RSEIVAVKKVREQKETDIRH------- 302
EI ++ ++ LG G V+ G L +++ VA+K ++++ E +R
Sbjct: 5 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAM 64
Query: 303 LR-KLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLL------------KDGEEVP-- 347
LR +L HPN+V GV T+ ++ YC++G L+ L D V
Sbjct: 65 LRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSA 124
Query: 348 --PQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTK 405
P + QIAAGM YL S ++H+DL + NVL+ K KISD G RE
Sbjct: 125 LEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYY 184
Query: 406 MSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVG 461
+ + WMAPE I + S DIWSYG+VLWE+ + PY + ++ +
Sbjct: 185 KLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIR 244
Query: 462 SSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHL 502
+ + LP P CP LM CW+ PS RP FK I S L
Sbjct: 245 NRQV-LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRL 284
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIW 229
VL+ K KISD G RE + + WMAPE I + S DIW
Sbjct: 159 VLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIW 214
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 132/278 (47%), Gaps = 30/278 (10%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-------VAVKKVREQKETDIR----- 301
DEWE+ E I+ + LG G+ G V+ G + + VA+K V E R
Sbjct: 3 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 62
Query: 302 ---HLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE--------VPPQ- 349
+++ N ++V+ GV +Q ++ME G L + L+ PP
Sbjct: 63 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 122
Query: 350 -RLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSF 408
++ A +IA GM YL++ + +HRDL + N ++ KI DFG R+
Sbjct: 123 SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKG 182
Query: 409 AGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSS 464
V WM+PE +++ + D+WS+G+VLWE+ T E PY+ + + ++ V
Sbjct: 183 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG 242
Query: 465 LHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHL 502
L L P CPD LM+MCW P RPSF +I+S +
Sbjct: 243 L-LDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSI 279
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 90/273 (32%), Positives = 134/273 (49%), Gaps = 35/273 (12%)
Query: 266 LQWLGSGAQGAVFSGKL------RSEIVAVKKVREQKETDIRH-------LRKLNHPNIV 312
LQ LG G G+V + E+VAVKK++ E +R L+ L H NIV
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 74
Query: 313 KFKGVCTQAP--CYCIVMEYCAYGPLYNLL-KDGEEVPPQRLYNWARQIAAGMNYLHSKQ 369
K+KGVC A ++MEY YG L + L K E + +L + QI GM YL +K+
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 134
Query: 370 IIHRDLKSPNVLIGSKEEAKISDFGTCREW--NNKSTKMSFAGT--VAWMAPEVIRNEQC 425
IHRDL + N+L+ ++ KI DFG + + + K+ G + W APE + +
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKF 194
Query: 426 SDKIDIWSYGIVLWELLTCETPYK------------DVDSSAIIWG---VGSSSLHLPIP 470
S D+WS+G+VL+EL T K D I++ + ++ LP P
Sbjct: 195 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP 254
Query: 471 STCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
CPD ++M CW+N + RPSF+ + +D
Sbjct: 255 DGCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 287
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 137/271 (50%), Gaps = 19/271 (7%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFSGKLRSE-----IVAVK--------KVREQKETDIR 301
++EI E I + +G G G V G S VA+K VRE+ +
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 302 HLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGE-EVPPQRLYNWARQIAA 360
+R+ +HP+IVK GV T+ P + I+ME C G L + L+ + + L +A Q++
Sbjct: 64 TMRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 122
Query: 361 GMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT--VAWMAPE 418
+ YL SK+ +HRD+ + NVL+ S + K+ DFG R + + + G + WMAPE
Sbjct: 123 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 182
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
I + + D+W +G+ +WE+L P++ V ++ +I G + LP+P CP
Sbjct: 183 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI-GRIENGERLPMPPNCPPTL 241
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
LM CW+ PS RP F ++ + L +E
Sbjct: 242 YSLMTKCWAYDPSRRPRFTELKAQLSTILEE 272
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGT--VAWMAPEVIRNEQCSDKIDIW 229
VL+ S + K+ DFG R + + + G + WMAPE I + + D+W
Sbjct: 142 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVW 196
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 137/271 (50%), Gaps = 19/271 (7%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFSGKLRSE-----IVAVK--------KVREQKETDIR 301
++EI E I + +G G G V G S VA+K VRE+ +
Sbjct: 6 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 65
Query: 302 HLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGE-EVPPQRLYNWARQIAA 360
+R+ +HP+IVK GV T+ P + I+ME C G L + L+ + + L +A Q++
Sbjct: 66 TMRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 124
Query: 361 GMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT--VAWMAPE 418
+ YL SK+ +HRD+ + NVL+ S + K+ DFG R + + + G + WMAPE
Sbjct: 125 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 184
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
I + + D+W +G+ +WE+L P++ V ++ +I G + LP+P CP
Sbjct: 185 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI-GRIENGERLPMPPNCPPTL 243
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
LM CW+ PS RP F ++ + L +E
Sbjct: 244 YSLMTKCWAYDPSRRPRFTELKAQLSTILEE 274
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGT--VAWMAPEVIRNEQCSDKIDIW 229
VL+ S + K+ DFG R + + + G + WMAPE I + + D+W
Sbjct: 144 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVW 198
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 137/271 (50%), Gaps = 19/271 (7%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFSGKLRSE-----IVAVK--------KVREQKETDIR 301
++EI E I + +G G G V G S VA+K VRE+ +
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 302 HLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGE-EVPPQRLYNWARQIAA 360
+R+ +HP+IVK GV T+ P + I+ME C G L + L+ + + L +A Q++
Sbjct: 64 TMRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 122
Query: 361 GMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT--VAWMAPE 418
+ YL SK+ +HRD+ + NVL+ S + K+ DFG R + + + G + WMAPE
Sbjct: 123 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 182
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
I + + D+W +G+ +WE+L P++ V ++ +I G + LP+P CP
Sbjct: 183 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI-GRIENGERLPMPPNCPPTL 241
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
LM CW+ PS RP F ++ + L +E
Sbjct: 242 YSLMTKCWAYDPSRRPRFTELKAQLSTILEE 272
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGT--VAWMAPEVIRNEQCSDKIDIW 229
VL+ S + K+ DFG R + + + G + WMAPE I + + D+W
Sbjct: 142 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVW 196
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 137/271 (50%), Gaps = 19/271 (7%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFSGKLRSE-----IVAVK--------KVREQKETDIR 301
++EI E I + +G G G V G S VA+K VRE+ +
Sbjct: 1 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 60
Query: 302 HLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGE-EVPPQRLYNWARQIAA 360
+R+ +HP+IVK GV T+ P + I+ME C G L + L+ + + L +A Q++
Sbjct: 61 TMRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 119
Query: 361 GMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT--VAWMAPE 418
+ YL SK+ +HRD+ + NVL+ S + K+ DFG R + + + G + WMAPE
Sbjct: 120 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 179
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
I + + D+W +G+ +WE+L P++ V ++ +I G + LP+P CP
Sbjct: 180 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI-GRIENGERLPMPPNCPPTL 238
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
LM CW+ PS RP F ++ + L +E
Sbjct: 239 YSLMTKCWAYDPSRRPRFTELKAQLSTILEE 269
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGT--VAWMAPEVIRNEQCSDKIDIW 229
VL+ S + K+ DFG R + + + G + WMAPE I + + D+W
Sbjct: 139 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVW 193
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 133/263 (50%), Gaps = 14/263 (5%)
Query: 253 RDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVR------EQKETDIRHLRK 305
+D WEIP ES+ LG G G V+ G VA+K ++ E + + ++K
Sbjct: 10 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKK 69
Query: 306 LNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKD--GEEVPPQRLYNWARQIAAGMN 363
L H +V+ V ++ P Y IV EY + G L + LK G+ + +L + A QIA+GM
Sbjct: 70 LRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIR 421
Y+ +HRDL++ N+L+G K++DFG R E N + + + W APE
Sbjct: 129 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 188
Query: 422 NEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLL 480
+ + K D+WS+GI+L EL T PY + + ++ V +P P CP+ L
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPESLHDL 247
Query: 481 MKMCWSNAPSSRPSFKQILSHLD 503
M CW P RP+F+ + + L+
Sbjct: 248 MCQCWRKDPEERPTFEYLQAFLE 270
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+G K++DFG R E N + + + W APE + + K D+W
Sbjct: 145 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 133/263 (50%), Gaps = 14/263 (5%)
Query: 253 RDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVR------EQKETDIRHLRK 305
+D WEIP ES+ LG G G V+ G VA+K ++ E + + ++K
Sbjct: 176 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKK 235
Query: 306 LNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKD--GEEVPPQRLYNWARQIAAGMN 363
L H +V+ V ++ P Y IV EY + G L + LK G+ + +L + A QIA+GM
Sbjct: 236 LRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 294
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIR 421
Y+ +HRDL++ N+L+G K++DFG R E N + + + W APE
Sbjct: 295 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 354
Query: 422 NEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLL 480
+ + K D+WS+GI+L EL T PY + + ++ V +P P CP+ L
Sbjct: 355 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPESLHDL 413
Query: 481 MKMCWSNAPSSRPSFKQILSHLD 503
M CW P RP+F+ + + L+
Sbjct: 414 MCQCWRKEPEERPTFEYLQAFLE 436
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+G K++DFG R E N + + + W APE + + K D+W
Sbjct: 311 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 137/271 (50%), Gaps = 19/271 (7%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFSGKLRSE-----IVAVK--------KVREQKETDIR 301
++EI E I + +G G G V G S VA+K VRE+ +
Sbjct: 384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 443
Query: 302 HLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGE-EVPPQRLYNWARQIAA 360
+R+ +HP+IVK GV T+ P + I+ME C G L + L+ + + L +A Q++
Sbjct: 444 TMRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLST 502
Query: 361 GMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT--VAWMAPE 418
+ YL SK+ +HRD+ + NVL+ + + K+ DFG R + + + G + WMAPE
Sbjct: 503 ALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 562
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
I + + D+W +G+ +WE+L P++ V ++ +I G + LP+P CP
Sbjct: 563 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI-GRIENGERLPMPPNCPPTL 621
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
LM CW+ PS RP F ++ + L +E
Sbjct: 622 YSLMTKCWAYDPSRRPRFTELKAQLSTILEE 652
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGT--VAWMAPEVIRNEQCSDKIDIW 229
VL+ + + K+ DFG R + + + G + WMAPE I + + D+W
Sbjct: 522 VLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVW 576
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 133/263 (50%), Gaps = 14/263 (5%)
Query: 253 RDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVR------EQKETDIRHLRK 305
+D WEIP ES+ LG G G V+ G VA+K ++ E + + ++K
Sbjct: 176 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKK 235
Query: 306 LNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKD--GEEVPPQRLYNWARQIAAGMN 363
L H +V+ V ++ P Y IV EY + G L + LK G+ + +L + A QIA+GM
Sbjct: 236 LRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 294
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIR 421
Y+ +HRDL++ N+L+G K++DFG R E N + + + W APE
Sbjct: 295 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 354
Query: 422 NEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLL 480
+ + K D+WS+GI+L EL T PY + + ++ V +P P CP+ L
Sbjct: 355 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPESLHDL 413
Query: 481 MKMCWSNAPSSRPSFKQILSHLD 503
M CW P RP+F+ + + L+
Sbjct: 414 MCQCWRKEPEERPTFEYLQAFLE 436
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+G K++DFG R E N + + + W APE + + K D+W
Sbjct: 311 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 133/263 (50%), Gaps = 14/263 (5%)
Query: 253 RDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVR------EQKETDIRHLRK 305
+D WEIP ES+ LG G G V+ G VA+K ++ E + + ++K
Sbjct: 1 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKK 60
Query: 306 LNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKD--GEEVPPQRLYNWARQIAAGMN 363
L H +V+ V ++ P Y IV EY + G L + LK G+ + +L + A QIA+GM
Sbjct: 61 LRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 119
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIR 421
Y+ +HRDL++ N+L+G K++DFG R E N + + + W APE
Sbjct: 120 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 179
Query: 422 NEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLL 480
+ + K D+WS+GI+L EL T PY + + ++ V +P P CP+ L
Sbjct: 180 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPESLHDL 238
Query: 481 MKMCWSNAPSSRPSFKQILSHLD 503
M CW P RP+F+ + + L+
Sbjct: 239 MCQCWRKDPEERPTFEYLQAFLE 261
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+G K++DFG R E N + + + W APE + + K D+W
Sbjct: 136 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 190
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 137/271 (50%), Gaps = 19/271 (7%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFSGKLRSE-----IVAVK--------KVREQKETDIR 301
++EI E I + +G G G V G S VA+K VRE+ +
Sbjct: 7 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 66
Query: 302 HLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGE-EVPPQRLYNWARQIAA 360
+R+ +HP+IVK GV T+ P + I+ME C G L + L+ + + L +A Q++
Sbjct: 67 TMRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 125
Query: 361 GMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT--VAWMAPE 418
+ YL SK+ +HRD+ + NVL+ S + K+ DFG R + + + G + WMAPE
Sbjct: 126 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 185
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
I + + D+W +G+ +WE+L P++ V ++ +I G + LP+P CP
Sbjct: 186 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI-GRIENGERLPMPPNCPPTL 244
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
LM CW+ PS RP F ++ + L +E
Sbjct: 245 YSLMTKCWAYDPSRRPRFTELKAQLSTILEE 275
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGT--VAWMAPEVIRNEQCSDKIDIW 229
VL+ S + K+ DFG R + + + G + WMAPE I + + D+W
Sbjct: 145 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVW 199
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 134/278 (48%), Gaps = 30/278 (10%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-------VAVKKVREQKETDIR----- 301
DEWE+ E I+ + LG G+ G V+ G + + VA+K V E R
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 302 ---HLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE--------VPPQ- 349
+++ N ++V+ GV +Q ++ME G L + L+ PP
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 350 -RLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCRE-WNNKSTKMS 407
++ A +IA GM YL++ + +HRDL + N + KI DFG R+ + +
Sbjct: 125 SKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKG 184
Query: 408 FAGT--VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSS 464
G V WM+PE +++ + D+WS+G+VLWE+ T E PY+ + + ++ V
Sbjct: 185 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG 244
Query: 465 LHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHL 502
L L P CPD LM+MCW P RPSF +I+S +
Sbjct: 245 L-LDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSI 281
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 137/271 (50%), Gaps = 19/271 (7%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFSGKLRSE-----IVAVK--------KVREQKETDIR 301
++EI E I + +G G G V G S VA+K VRE+ +
Sbjct: 32 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 91
Query: 302 HLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGE-EVPPQRLYNWARQIAA 360
+R+ +HP+IVK GV T+ P + I+ME C G L + L+ + + L +A Q++
Sbjct: 92 TMRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 150
Query: 361 GMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT--VAWMAPE 418
+ YL SK+ +HRD+ + NVL+ S + K+ DFG R + + + G + WMAPE
Sbjct: 151 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 210
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
I + + D+W +G+ +WE+L P++ V ++ +I G + LP+P CP
Sbjct: 211 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI-GRIENGERLPMPPNCPPTL 269
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
LM CW+ PS RP F ++ + L +E
Sbjct: 270 YSLMTKCWAYDPSRRPRFTELKAQLSTILEE 300
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGT--VAWMAPEVIRNEQCSDKIDIW 229
VL+ S + K+ DFG R + + + G + WMAPE I + + D+W
Sbjct: 170 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVW 224
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 137/271 (50%), Gaps = 19/271 (7%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFSGKLRSE-----IVAVK--------KVREQKETDIR 301
++EI E I + +G G G V G S VA+K VRE+ +
Sbjct: 9 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 68
Query: 302 HLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGE-EVPPQRLYNWARQIAA 360
+R+ +HP+IVK GV T+ P + I+ME C G L + L+ + + L +A Q++
Sbjct: 69 TMRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 127
Query: 361 GMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT--VAWMAPE 418
+ YL SK+ +HRD+ + NVL+ S + K+ DFG R + + + G + WMAPE
Sbjct: 128 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 187
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
I + + D+W +G+ +WE+L P++ V ++ +I G + LP+P CP
Sbjct: 188 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI-GRIENGERLPMPPNCPPTL 246
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
LM CW+ PS RP F ++ + L +E
Sbjct: 247 YSLMTKCWAYDPSRRPRFTELKAQLSTILEE 277
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGT--VAWMAPEVIRNEQCSDKIDIW 229
VL+ S + K+ DFG R + + + G + WMAPE I + + D+W
Sbjct: 147 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVW 201
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 134/278 (48%), Gaps = 30/278 (10%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-------VAVKKVREQKETDIR----- 301
DEWE+ E I+ + LG G+ G V+ G + + VA+K V E R
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 71
Query: 302 ---HLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE--------VPPQ- 349
+++ N ++V+ GV +Q ++ME G L + L+ PP
Sbjct: 72 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 131
Query: 350 -RLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCRE-WNNKSTKMS 407
++ A +IA GM YL++ + +HRDL + N ++ KI DFG R+ +
Sbjct: 132 SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKG 191
Query: 408 FAGT--VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSS 464
G V WM+PE +++ + D+WS+G+VLWE+ T E PY+ + + ++ V
Sbjct: 192 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG 251
Query: 465 LHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHL 502
L L P CPD LM+MCW P RPSF +I+S +
Sbjct: 252 L-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 288
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 133/263 (50%), Gaps = 14/263 (5%)
Query: 253 RDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVR------EQKETDIRHLRK 305
+D WEIP ES+ LG G G V+ G VA+K ++ E + + ++K
Sbjct: 10 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKK 69
Query: 306 LNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKD--GEEVPPQRLYNWARQIAAGMN 363
L H +V+ V ++ P Y IV EY + G L + LK G+ + +L + A QIA+GM
Sbjct: 70 LRHEKLVQLYAVVSEEPIY-IVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIR 421
Y+ +HRDL++ N+L+G K++DFG R E N + + + W APE
Sbjct: 129 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 188
Query: 422 NEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLL 480
+ + K D+WS+GI+L EL T PY + + ++ V +P P CP+ L
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPESLHDL 247
Query: 481 MKMCWSNAPSSRPSFKQILSHLD 503
M CW P RP+F+ + + L+
Sbjct: 248 MCQCWRKDPEERPTFEYLQAFLE 270
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+G K++DFG R E N + + + W APE + + K D+W
Sbjct: 145 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 133/263 (50%), Gaps = 14/263 (5%)
Query: 253 RDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVR------EQKETDIRHLRK 305
+D WEIP ES+ LG G G V+ G VA+K ++ E + + ++K
Sbjct: 176 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKK 235
Query: 306 LNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKD--GEEVPPQRLYNWARQIAAGMN 363
L H +V+ V ++ P Y IV EY + G L + LK G+ + +L + A QIA+GM
Sbjct: 236 LRHEKLVQLYAVVSEEPIY-IVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 294
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIR 421
Y+ +HRDL++ N+L+G K++DFG R E N + + + W APE
Sbjct: 295 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 354
Query: 422 NEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLL 480
+ + K D+WS+GI+L EL T PY + + ++ V +P P CP+ L
Sbjct: 355 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPESLHDL 413
Query: 481 MKMCWSNAPSSRPSFKQILSHLD 503
M CW P RP+F+ + + L+
Sbjct: 414 MCQCWRKEPEERPTFEYLQAFLE 436
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+G K++DFG R E N + + + W APE + + K D+W
Sbjct: 311 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 138/286 (48%), Gaps = 35/286 (12%)
Query: 253 RDEWEIPFESISDLQWLGSGAQGAVFSGKL------RSEIVAVKKVREQKETDIRH---- 302
RD + + LQ LG G G+V + E+VAVKK++ E +R
Sbjct: 3 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 62
Query: 303 ---LRKLNHPNIVKFKGVCTQAP--CYCIVMEYCAYGPLYNLL-KDGEEVPPQRLYNWAR 356
L+ L H NIVK+KGVC A ++MEY YG L + L K E + +L +
Sbjct: 63 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 122
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGT--V 412
QI GM YL +K+ IHR+L + N+L+ ++ KI DFG + + + K+ G +
Sbjct: 123 QICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPI 182
Query: 413 AWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYK------------DVDSSAIIWG- 459
W APE + + S D+WS+G+VL+EL T K D I++
Sbjct: 183 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 242
Query: 460 --VGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
+ ++ LP P CPD ++M CW+N + RPSF+ + +D
Sbjct: 243 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 288
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 131/257 (50%), Gaps = 24/257 (9%)
Query: 269 LGSGAQGAVFSGKLRS-----EIVAVKKV------REQKE--TDIRHLRKLNHPNIVKFK 315
+G+G G V G+L++ VA+K + R+++E ++ + + HPNI++ +
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 316 GVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAGMNYLHSKQIIHR 373
GV T + I+ E+ G L + L+ DG+ Q L R IA+GM YL +HR
Sbjct: 82 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQ-LVGMLRGIASGMRYLAEMSYVHR 140
Query: 374 DLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA------WMAPEVIRNEQCSD 427
DL + N+L+ S K+SDFG R S+ ++ ++ W APE I + +
Sbjct: 141 DLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTS 200
Query: 428 KIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWS 486
D WSYGIV+WE+++ E PY D+ + +I + LP P CP LM CW
Sbjct: 201 ASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAI-EQDYRLPPPPDCPTSLHQLMLDCWQ 259
Query: 487 NAPSSRPSFKQILSHLD 503
++RP F Q++S LD
Sbjct: 260 KDRNARPRFPQVVSALD 276
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA------WMAPEVIRNEQCSDKIDIW 229
+L+ S K+SDFG R S+ ++ ++ W APE I + + D W
Sbjct: 147 ILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAW 205
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 133/263 (50%), Gaps = 14/263 (5%)
Query: 253 RDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVR------EQKETDIRHLRK 305
+D WEIP ES+ LG G G V+ G VA+K ++ E + + ++K
Sbjct: 10 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKK 69
Query: 306 LNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKD--GEEVPPQRLYNWARQIAAGMN 363
L H +V+ V ++ P Y IV EY + G L + LK G+ + +L + A QIA+GM
Sbjct: 70 LRHEKLVQLYAVVSEEPIY-IVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIR 421
Y+ +HRDL++ N+L+G K++DFG R E N + + + W APE
Sbjct: 129 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 188
Query: 422 NEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLL 480
+ + K D+WS+GI+L EL T PY + + ++ V +P P CP+ L
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPESLHDL 247
Query: 481 MKMCWSNAPSSRPSFKQILSHLD 503
M CW P RP+F+ + + L+
Sbjct: 248 MCQCWRKDPEERPTFEYLQAFLE 270
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+G K++DFG R E N + + + W APE + + K D+W
Sbjct: 145 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 133/263 (50%), Gaps = 14/263 (5%)
Query: 253 RDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVR------EQKETDIRHLRK 305
+D WEIP ES+ LG G G V+ G VA+K ++ E + + ++K
Sbjct: 10 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKK 69
Query: 306 LNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKD--GEEVPPQRLYNWARQIAAGMN 363
+ H +V+ V ++ P Y IV EY + G L + LK G+ + +L + A QIA+GM
Sbjct: 70 IRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIR 421
Y+ +HRDL++ N+L+G K++DFG R E N + + + W APE
Sbjct: 129 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 188
Query: 422 NEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLL 480
+ + K D+WS+GI+L EL T PY + + ++ V +P P CP+ L
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPESLHDL 247
Query: 481 MKMCWSNAPSSRPSFKQILSHLD 503
M CW P RP+F+ + + L+
Sbjct: 248 MCQCWRKDPEERPTFEYLQAFLE 270
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+G K++DFG R E N + + + W APE + + K D+W
Sbjct: 145 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 134/265 (50%), Gaps = 14/265 (5%)
Query: 251 VLRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVR------EQKETDIRHL 303
+ +D WEIP ES+ LG G G V+ G VA+K ++ E + + +
Sbjct: 257 LAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVM 316
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKD--GEEVPPQRLYNWARQIAAG 361
+KL H +V+ V ++ P Y IV EY + G L + LK G+ + +L + A QIA+G
Sbjct: 317 KKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG 375
Query: 362 MNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEV 419
M Y+ +HRDL++ N+L+G K++DFG R E N + + + W APE
Sbjct: 376 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 435
Query: 420 IRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQ 478
+ + K D+WS+GI+L EL T PY + + ++ V +P P CP+
Sbjct: 436 ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPESLH 494
Query: 479 LLMKMCWSNAPSSRPSFKQILSHLD 503
LM CW P RP+F+ + + L+
Sbjct: 495 DLMCQCWRKEPEERPTFEYLQAFLE 519
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+G K++DFG R E N + + + W APE + + K D+W
Sbjct: 394 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 448
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 132/263 (50%), Gaps = 14/263 (5%)
Query: 253 RDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVR------EQKETDIRHLRK 305
+D WEIP ES+ LG G G V+ G VA+K ++ E + + ++K
Sbjct: 10 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKK 69
Query: 306 LNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKD--GEEVPPQRLYNWARQIAAGMN 363
L H +V+ V ++ P Y IV EY + G L + LK G+ + +L + A QIA+GM
Sbjct: 70 LRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIR 421
Y+ +HRDL + N+L+G K++DFG R E N + + + W APE
Sbjct: 129 YVERMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 188
Query: 422 NEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLL 480
+ + K D+WS+GI+L EL T PY + + ++ V +P P CP+ L
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPESLHDL 247
Query: 481 MKMCWSNAPSSRPSFKQILSHLD 503
M CW P RP+F+ + + L+
Sbjct: 248 MCQCWRKDPEERPTFEYLQAFLE 270
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+G K++DFG R E N + + + W APE + + K D+W
Sbjct: 145 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 133/263 (50%), Gaps = 14/263 (5%)
Query: 253 RDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVR------EQKETDIRHLRK 305
+D WEIP ES+ LG G G V+ G VA+K ++ E + + ++K
Sbjct: 177 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKK 236
Query: 306 LNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKD--GEEVPPQRLYNWARQIAAGMN 363
L H +V+ V ++ P Y IV EY + G L + LK G+ + +L + A QIA+GM
Sbjct: 237 LRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 295
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIR 421
Y+ +HRDL++ N+L+G K++DFG R E N + + + W APE
Sbjct: 296 YVERMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAAL 355
Query: 422 NEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLL 480
+ + K D+WS+GI+L EL T PY + + ++ V +P P CP+ L
Sbjct: 356 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPESLHDL 414
Query: 481 MKMCWSNAPSSRPSFKQILSHLD 503
M CW P RP+F+ + + L+
Sbjct: 415 MCQCWRKDPEERPTFEYLQAFLE 437
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+G K++DFG R E N + + + W APE + + K D+W
Sbjct: 312 ILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 366
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 136/290 (46%), Gaps = 35/290 (12%)
Query: 249 SFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKL------RSEIVAVKKVREQKETDIRH 302
+F RD + + L+ LG G G+V + E+VAVKK++ E +R
Sbjct: 1 AFEDRDPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 60
Query: 303 -------LRKLNHPNIVKFKGVCTQAP--CYCIVMEYCAYGPLYNLL-KDGEEVPPQRLY 352
L+ L H NIVK+KGVC A ++ME+ YG L L K E + +L
Sbjct: 61 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLL 120
Query: 353 NWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSF 408
+ QI GM YL +K+ IHRDL + N+L+ ++ KI DFG + + K
Sbjct: 121 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 180
Query: 409 AGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYK------------DVDSSAI 456
+ W APE + + S D+WS+G+VL+EL T K D I
Sbjct: 181 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 240
Query: 457 IWG---VGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
++ + ++ LP P CPD ++M CW+N + RPSF+ + +D
Sbjct: 241 VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 290
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 137/271 (50%), Gaps = 19/271 (7%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFSGKLRSE-----IVAVK--------KVREQKETDIR 301
++EI E I + +G G G V G S VA+K VRE+ +
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 302 HLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGE-EVPPQRLYNWARQIAA 360
+R+ +HP+IVK GV T+ P + I+ME C G L + L+ + + L +A Q++
Sbjct: 64 TMRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLST 122
Query: 361 GMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT--VAWMAPE 418
+ YL SK+ +HRD+ + NVL+ + + K+ DFG R + + + G + WMAPE
Sbjct: 123 ALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 182
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
I + + D+W +G+ +WE+L P++ V ++ +I G + LP+P CP
Sbjct: 183 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI-GRIENGERLPMPPNCPPTL 241
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
LM CW+ PS RP F ++ + L +E
Sbjct: 242 YSLMTKCWAYDPSRRPRFTELKAQLSTILEE 272
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGT--VAWMAPEVIRNEQCSDKIDIW 229
VL+ + + K+ DFG R + + + G + WMAPE I + + D+W
Sbjct: 142 VLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVW 196
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 134/287 (46%), Gaps = 38/287 (13%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFS----GKLRSE---IVAVKKV--------REQKETD 299
+WE P +S + LG+GA G V G ++S+ VAVK + RE ++
Sbjct: 33 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSE 92
Query: 300 IRHLRKL-NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE------VPPQRLY 352
++ L L NH NIV G CT ++ EYC YG L N L+ + P +
Sbjct: 93 LKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIME 152
Query: 353 ------------NWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWN 400
+++ Q+A GM +L SK IHRDL + N+L+ KI DFG R+
Sbjct: 153 DDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIK 212
Query: 401 NKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDVDSSAI 456
N S + V WMAPE I N + + D+WSYGI LWEL + +PY + +
Sbjct: 213 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 272
Query: 457 IWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
+ + + P P +MK CW P RP+FKQI+ ++
Sbjct: 273 FYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 319
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 33/76 (43%), Gaps = 9/76 (11%)
Query: 159 FLA--GCTTPDALAESIGLGVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMA 213
FLA C D A +I L+ KI DFG R+ N S + V WMA
Sbjct: 176 FLASKNCIHRDLAARNI----LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMA 231
Query: 214 PEVIRNEQCSDKIDIW 229
PE I N + + D+W
Sbjct: 232 PESIFNCVYTFESDVW 247
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 134/287 (46%), Gaps = 38/287 (13%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFS----GKLRSE---IVAVKKV--------REQKETD 299
+WE P +S + LG+GA G V G ++S+ VAVK + RE ++
Sbjct: 35 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSE 94
Query: 300 IRHLRKL-NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE------VPPQRLY 352
++ L L NH NIV G CT ++ EYC YG L N L+ + P +
Sbjct: 95 LKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIME 154
Query: 353 ------------NWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWN 400
+++ Q+A GM +L SK IHRDL + N+L+ KI DFG R+
Sbjct: 155 DDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIK 214
Query: 401 NKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDVDSSAI 456
N S + V WMAPE I N + + D+WSYGI LWEL + +PY + +
Sbjct: 215 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 274
Query: 457 IWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
+ + + P P +MK CW P RP+FKQI+ ++
Sbjct: 275 FYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 321
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 33/76 (43%), Gaps = 9/76 (11%)
Query: 159 FLA--GCTTPDALAESIGLGVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMA 213
FLA C D A +I L+ KI DFG R+ N S + V WMA
Sbjct: 178 FLASKNCIHRDLAARNI----LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMA 233
Query: 214 PEVIRNEQCSDKIDIW 229
PE I N + + D+W
Sbjct: 234 PESIFNCVYTFESDVW 249
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 133/257 (51%), Gaps = 24/257 (9%)
Query: 269 LGSGAQGAVFSGKLRS-----EIVAVKKV------REQKE--TDIRHLRKLNHPNIVKFK 315
+G+G G V G+L++ VA+K + R+++E ++ + + HPNI++ +
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 316 GVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAGMNYLHSKQIIHR 373
GV T + I+ E+ G L + L+ DG+ Q L R IA+GM YL +HR
Sbjct: 84 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQ-LVGMLRGIASGMRYLAEMSYVHR 142
Query: 374 DLKSPNVLIGSKEEAKISDFGTCR---EWNNKSTKMSFAGT---VAWMAPEVIRNEQCSD 427
DL + N+L+ S K+SDFG R E ++ T+ S G + W APE I + +
Sbjct: 143 DLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTS 202
Query: 428 KIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWS 486
D WSYGIV+WE+++ E PY D+ + +I + LP P CP LM CW
Sbjct: 203 ASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAI-EQDYRLPPPPDCPTSLHQLMLDCWQ 261
Query: 487 NAPSSRPSFKQILSHLD 503
++RP F Q++S LD
Sbjct: 262 KDRNARPRFPQVVSALD 278
Score = 29.3 bits (64), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Query: 177 VLIGSKEEAKISDFGTCR---EWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIW 229
+L+ S K+SDFG R E ++ T+ S G + W APE I + + D W
Sbjct: 149 ILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAW 207
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 134/287 (46%), Gaps = 38/287 (13%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFS----GKLRSE---IVAVKKV--------REQKETD 299
+WE P +S + LG+GA G V G ++S+ VAVK + RE ++
Sbjct: 40 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSE 99
Query: 300 IRHLRKL-NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE------VPPQRLY 352
++ L L NH NIV G CT ++ EYC YG L N L+ + P +
Sbjct: 100 LKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIME 159
Query: 353 ------------NWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWN 400
+++ Q+A GM +L SK IHRDL + N+L+ KI DFG R+
Sbjct: 160 DDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIK 219
Query: 401 NKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDVDSSAI 456
N S + V WMAPE I N + + D+WSYGI LWEL + +PY + +
Sbjct: 220 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 279
Query: 457 IWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
+ + + P P +MK CW P RP+FKQI+ ++
Sbjct: 280 FYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 326
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 33/76 (43%), Gaps = 9/76 (11%)
Query: 159 FLA--GCTTPDALAESIGLGVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMA 213
FLA C D A +I L+ KI DFG R+ N S + V WMA
Sbjct: 183 FLASKNCIHRDLAARNI----LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMA 238
Query: 214 PEVIRNEQCSDKIDIW 229
PE I N + + D+W
Sbjct: 239 PESIFNCVYTFESDVW 254
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/283 (32%), Positives = 132/283 (46%), Gaps = 38/283 (13%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFS----GKLRSE---IVAVKKV--------REQKETD 299
+WE P +S + LG+GA G V G ++S+ VAVK + RE ++
Sbjct: 17 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSE 76
Query: 300 IRHLRKL-NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE------VPPQRLY 352
++ L L NH NIV G CT ++ EYC YG L N L+ + P +
Sbjct: 77 LKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIME 136
Query: 353 ------------NWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWN 400
+++ Q+A GM +L SK IHRDL + N+L+ KI DFG R+
Sbjct: 137 DDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIK 196
Query: 401 NKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDVDSSAI 456
N S + V WMAPE I N + + D+WSYGI LWEL + +PY + +
Sbjct: 197 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 256
Query: 457 IWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQIL 499
+ + + P P +MK CW P RP+FKQI+
Sbjct: 257 FYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 299
Score = 32.3 bits (72), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 33/76 (43%), Gaps = 9/76 (11%)
Query: 159 FLA--GCTTPDALAESIGLGVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMA 213
FLA C D A +I L+ KI DFG R+ N S + V WMA
Sbjct: 160 FLASKNCIHRDLAARNI----LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMA 215
Query: 214 PEVIRNEQCSDKIDIW 229
PE I N + + D+W
Sbjct: 216 PESIFNCVYTFESDVW 231
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/283 (32%), Positives = 131/283 (46%), Gaps = 38/283 (13%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFS----GKLRSE---IVAVKKV--------REQKETD 299
+WE P +S + LG+GA G V G ++S+ VAVK + RE ++
Sbjct: 40 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSE 99
Query: 300 IRHLRKL-NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE------VPPQRLY 352
++ L L NH NIV G CT ++ EYC YG L N L+ + P +
Sbjct: 100 LKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIME 159
Query: 353 ------------NWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWN 400
+++ Q+A GM +L SK IHRDL + N+L+ KI DFG R
Sbjct: 160 DDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIK 219
Query: 401 NKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDVDSSAI 456
N S + V WMAPE I N + + D+WSYGI LWEL + +PY + +
Sbjct: 220 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 279
Query: 457 IWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQIL 499
+ + + P P +MK CW P RP+FKQI+
Sbjct: 280 FYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 322
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 32/76 (42%), Gaps = 9/76 (11%)
Query: 159 FLA--GCTTPDALAESIGLGVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMA 213
FLA C D A +I L+ KI DFG R N S + V WMA
Sbjct: 183 FLASKNCIHRDLAARNI----LLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMA 238
Query: 214 PEVIRNEQCSDKIDIW 229
PE I N + + D+W
Sbjct: 239 PESIFNCVYTFESDVW 254
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 132/263 (50%), Gaps = 14/263 (5%)
Query: 253 RDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVR------EQKETDIRHLRK 305
+D WEIP ES+ LG G G V+ G VA+K ++ E + + ++K
Sbjct: 7 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKK 66
Query: 306 LNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKD--GEEVPPQRLYNWARQIAAGMN 363
L H +V+ V ++ P Y IV EY G L + LK G+ + +L + + QIA+GM
Sbjct: 67 LRHEKLVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMA 125
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIR 421
Y+ +HRDL++ N+L+G K++DFG R E N + + + W APE
Sbjct: 126 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 185
Query: 422 NEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLL 480
+ + K D+WS+GI+L EL T PY + + ++ V +P P CP+ L
Sbjct: 186 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPESLHDL 244
Query: 481 MKMCWSNAPSSRPSFKQILSHLD 503
M CW P RP+F+ + + L+
Sbjct: 245 MCQCWRKEPEERPTFEYLQAFLE 267
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+G K++DFG R E N + + + W APE + + K D+W
Sbjct: 142 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 196
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 139/266 (52%), Gaps = 20/266 (7%)
Query: 257 EIPFESISDLQWLGSGAQGAVFSGKLR----SEI-VAVKKVR----EQKETDIRH----L 303
E+ +IS + +G+G G V SG+L+ EI VA+K ++ E++ D +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLL-KDGEEVPPQRLYNWARQIAAGM 362
+ +HPNI++ +GV T++ IV E G L + L K + +L R IA+GM
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 363 NYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVA--WMAPE 418
YL +HRDL + N+LI S K+SDFG R E + ++ + G + W +PE
Sbjct: 161 KYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
I + + D+WSYGIVLWE+++ E PY ++ + +I V LP P CP
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV-DEGYRLPPPMDCPAAL 279
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLD 503
LM CW ++RP F+QI+S LD
Sbjct: 280 YQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 139/266 (52%), Gaps = 20/266 (7%)
Query: 257 EIPFESISDLQWLGSGAQGAVFSGKLR----SEI-VAVKKVR----EQKETDIRH----L 303
E+ +IS + +G+G G V SG+L+ EI VA+K ++ E++ D +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLL-KDGEEVPPQRLYNWARQIAAGM 362
+ +HPNI++ +GV T++ IV E G L + L K + +L R IA+GM
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 363 NYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVA--WMAPE 418
YL +HRDL + N+LI S K+SDFG R E + ++ + G + W +PE
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
I + + D+WSYGIVLWE+++ E PY ++ + +I V LP P CP
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV-DEGYRLPPPMDCPAAL 279
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLD 503
LM CW ++RP F+QI+S LD
Sbjct: 280 YQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 139/266 (52%), Gaps = 20/266 (7%)
Query: 257 EIPFESISDLQWLGSGAQGAVFSGKLR----SEI-VAVKKVR----EQKETDIRH----L 303
E+ +IS + +G+G G V SG+L+ EI VA+K ++ E++ D +
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLL-KDGEEVPPQRLYNWARQIAAGM 362
+ +HPNI++ +GV T++ IV E G L + L K + +L R IA+GM
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 131
Query: 363 NYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVA--WMAPE 418
YL +HRDL + N+LI S K+SDFG R E + ++ + G + W +PE
Sbjct: 132 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 191
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
I + + D+WSYGIVLWE+++ E PY ++ + +I V LP P CP
Sbjct: 192 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV-DEGYRLPPPMDCPAAL 250
Query: 478 QLLMKMCWSNAPSSRPSFKQILSHLD 503
LM CW ++RP F+QI+S LD
Sbjct: 251 YQLMLDCWQKDRNNRPKFEQIVSILD 276
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 128/267 (47%), Gaps = 22/267 (8%)
Query: 257 EIPFESISDLQWLGSGAQGAVFSGKL-----RSEIVAVK--------KVREQKETDIRHL 303
EI I + +G G G V SG+L R VA+K K R ++ +
Sbjct: 25 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM 84
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAG 361
+ +HPNI+ +GV T+ I+ EY G L L+ DG Q L R I +G
Sbjct: 85 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQ-LVGMLRGIGSG 143
Query: 362 MNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVA--WMAP 417
M YL +HRDL + N+L+ S K+SDFG R E + ++ + G + W AP
Sbjct: 144 MKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 203
Query: 418 EVIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDG 476
E I + + D+WSYGIV+WE+++ E PY D+ + +I + LP P CP
Sbjct: 204 EAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI-EEGYRLPPPMDCPIA 262
Query: 477 FQLLMKMCWSNAPSSRPSFKQILSHLD 503
LM CW S RP F QI++ LD
Sbjct: 263 LHQLMLDCWQKERSDRPKFGQIVNMLD 289
Score = 29.3 bits (64), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVA--WMAPEVIRNEQCSDKIDIW 229
+L+ S K+SDFG R E + ++ + G + W APE I + + D+W
Sbjct: 162 ILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVW 218
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 132/263 (50%), Gaps = 14/263 (5%)
Query: 253 RDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVR------EQKETDIRHLRK 305
+D WEIP ES+ LG G G V+ G VA+K ++ E + + ++K
Sbjct: 7 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKK 66
Query: 306 LNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKD--GEEVPPQRLYNWARQIAAGMN 363
L H +V+ V ++ P Y IV EY G L + LK G+ + +L + + QIA+GM
Sbjct: 67 LRHEKLVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMA 125
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIR 421
Y+ +HRDL++ N+L+G K++DFG R E N + + + W APE
Sbjct: 126 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAAL 185
Query: 422 NEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLL 480
+ + K D+WS+GI+L EL T PY + + ++ V +P P CP+ L
Sbjct: 186 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPESLHDL 244
Query: 481 MKMCWSNAPSSRPSFKQILSHLD 503
M CW P RP+F+ + + L+
Sbjct: 245 MCQCWRKEPEERPTFEYLQAFLE 267
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+G K++DFG R E N + + + W APE + + K D+W
Sbjct: 142 ILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVW 196
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 131/260 (50%), Gaps = 14/260 (5%)
Query: 256 WEIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVR------EQKETDIRHLRKLNH 308
WEIP ES+ LG G G V+ G VA+K ++ E + + ++KL H
Sbjct: 2 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH 61
Query: 309 PNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKD--GEEVPPQRLYNWARQIAAGMNYLH 366
+V+ V ++ P Y IV EY + G L + LK G+ + +L + A QIA+GM Y+
Sbjct: 62 EKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 120
Query: 367 SKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRNEQ 424
+HRDL++ N+L+G K++DFG R E N + + + W APE +
Sbjct: 121 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 180
Query: 425 CSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKM 483
+ K D+WS+GI+L EL T PY + + ++ V +P P CP+ LM
Sbjct: 181 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPESLHDLMCQ 239
Query: 484 CWSNAPSSRPSFKQILSHLD 503
CW P RP+F+ + + L+
Sbjct: 240 CWRKDPEERPTFEYLQAFLE 259
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+G K++DFG R E N + + + W APE + + K D+W
Sbjct: 134 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 188
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 128/267 (47%), Gaps = 22/267 (8%)
Query: 257 EIPFESISDLQWLGSGAQGAVFSGKL-----RSEIVAVK--------KVREQKETDIRHL 303
EI I + +G G G V SG+L R VA+K K R ++ +
Sbjct: 10 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM 69
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAG 361
+ +HPNI+ +GV T+ I+ EY G L L+ DG Q L R I +G
Sbjct: 70 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQ-LVGMLRGIGSG 128
Query: 362 MNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVA--WMAP 417
M YL +HRDL + N+L+ S K+SDFG R E + ++ + G + W AP
Sbjct: 129 MKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 188
Query: 418 EVIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDG 476
E I + + D+WSYGIV+WE+++ E PY D+ + +I + LP P CP
Sbjct: 189 EAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI-EEGYRLPPPMDCPIA 247
Query: 477 FQLLMKMCWSNAPSSRPSFKQILSHLD 503
LM CW S RP F QI++ LD
Sbjct: 248 LHQLMLDCWQKERSDRPKFGQIVNMLD 274
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVA--WMAPEVIRNEQCSDKIDIW 229
+L+ S K+SDFG R E + ++ + G + W APE I + + D+W
Sbjct: 147 ILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVW 203
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 131/262 (50%), Gaps = 14/262 (5%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVR------EQKETDIRHLRKL 306
D WEIP ES+ LG G G V+ G VA+K ++ E + + ++KL
Sbjct: 1 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL 60
Query: 307 NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKD--GEEVPPQRLYNWARQIAAGMNY 364
H +V+ V ++ P IV EY + G L + LK G+ + +L + A QIA+GM Y
Sbjct: 61 RHEKLVQLYAVVSEEPIX-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY 119
Query: 365 LHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRN 422
+ +HRDL++ N+L+G K++DFG R E N + + + W APE
Sbjct: 120 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALY 179
Query: 423 EQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLM 481
+ + K D+WS+GI+L EL T PY + + ++ V +P P CP+ LM
Sbjct: 180 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPESLHDLM 238
Query: 482 KMCWSNAPSSRPSFKQILSHLD 503
CW P RP+F+ + + L+
Sbjct: 239 CQCWRKEPEERPTFEYLQAFLE 260
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+G K++DFG R E N + + + W APE + + K D+W
Sbjct: 135 ILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 189
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 128/267 (47%), Gaps = 22/267 (8%)
Query: 257 EIPFESISDLQWLGSGAQGAVFSGKL-----RSEIVAVK--------KVREQKETDIRHL 303
EI I + +G G G V SG+L R VA+K K R ++ +
Sbjct: 4 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM 63
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAG 361
+ +HPNI+ +GV T+ I+ EY G L L+ DG Q L R I +G
Sbjct: 64 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQ-LVGMLRGIGSG 122
Query: 362 MNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVA--WMAP 417
M YL +HRDL + N+L+ S K+SDFG R E + ++ + G + W AP
Sbjct: 123 MKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 182
Query: 418 EVIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDG 476
E I + + D+WSYGIV+WE+++ E PY D+ + +I + LP P CP
Sbjct: 183 EAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI-EEGYRLPPPMDCPIA 241
Query: 477 FQLLMKMCWSNAPSSRPSFKQILSHLD 503
LM CW S RP F QI++ LD
Sbjct: 242 LHQLMLDCWQKERSDRPKFGQIVNMLD 268
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVA--WMAPEVIRNEQCSDKIDIW 229
+L+ S K+SDFG R E + ++ + G + W APE I + + D+W
Sbjct: 141 ILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVW 197
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 141/288 (48%), Gaps = 41/288 (14%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFSGKL---------RSEIVAVKKVREQ-KETDIRHL- 303
+WE P + ++ + LG GA G V + + VAVK +++ E D+ L
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLV 88
Query: 304 -----RKL--NHPNIVKFKGVCTQ-APCYCIVMEYCAYGPLYNLLK-----------DGE 344
K+ H NI+ G CTQ P Y IV EY + G L L+ D
Sbjct: 89 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEXSYDIN 147
Query: 345 EVPPQR-----LYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREW 399
VP ++ L + Q+A GM YL S++ IHRDL + NVL+ KI+DFG R+
Sbjct: 148 RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 400 NN-KSTKMSFAG--TVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDVDSSA 455
NN K + G V WMAPE + + + + D+WS+G+++WE+ T +PY +
Sbjct: 208 NNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 456 IIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
++ + + P+ C + ++M+ CW PS RP+FKQ++ LD
Sbjct: 268 -LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 177 VLIGSKEEAKISDFGTCREWNN-KSTKMSFAG--TVAWMAPEVIRNEQCSDKIDIW 229
VL+ KI+DFG R+ NN K + G V WMAPE + + + + D+W
Sbjct: 188 VLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 243
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 141/288 (48%), Gaps = 41/288 (14%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFSGKL---------RSEIVAVKKVREQ-KETDIRHL- 303
+WE P + ++ + LG GA G V + + VAVK +++ E D+ L
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLV 88
Query: 304 -----RKL--NHPNIVKFKGVCTQ-APCYCIVMEYCAYGPLYNLLK-----------DGE 344
K+ H NI+ G CTQ P Y IV EY + G L L+ D
Sbjct: 89 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDIN 147
Query: 345 EVPPQR-----LYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREW 399
VP ++ L + Q+A GM YL S++ IHRDL + NVL+ KI+DFG R+
Sbjct: 148 RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 400 NN-KSTKMSFAG--TVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDVDSSA 455
NN K + G V WMAPE + + + + D+WS+G+++WE+ T +PY +
Sbjct: 208 NNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 456 IIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
++ + + P+ C + ++M+ CW PS RP+FKQ++ LD
Sbjct: 268 -LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 177 VLIGSKEEAKISDFGTCREWNN-KSTKMSFAG--TVAWMAPEVIRNEQCSDKIDIW 229
VL+ KI+DFG R+ NN K + G V WMAPE + + + + D+W
Sbjct: 188 VLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 243
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 140/292 (47%), Gaps = 51/292 (17%)
Query: 256 WEIPFESISDLQWLGSGAQGAVFSGKL---------RSEIVAVKKVR-EQKETDIRHL-- 303
WE+P + + + LG GA G V + R VAVK ++ + E D+ L
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS 82
Query: 304 ----RKL--NHPNIVKFKGVCTQ-APCYCIV-------------------MEYCAYGPLY 337
K+ H NI+ G CTQ P Y IV +EYC Y P +
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYC-YNPSH 141
Query: 338 NLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR 397
N E++ + L + A Q+A GM YL SK+ IHRDL + NVL+ KI+DFG R
Sbjct: 142 N---PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 398 -----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDV 451
++ K+T V WMAPE + + + + D+WS+G++LWE+ T +PY V
Sbjct: 199 DIHHIDYYKKTTNGRLP--VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 256
Query: 452 DSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
++ + + PS C + ++M+ CW PS RP+FKQ++ LD
Sbjct: 257 PVEE-LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
Query: 177 VLIGSKEEAKISDFGTCRE-----WNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ KI+DFG R+ + K+T V WMAPE + + + + D+W
Sbjct: 181 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP--VKWMAPEALFDRIYTHQSDVW 236
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 140/292 (47%), Gaps = 51/292 (17%)
Query: 256 WEIPFESISDLQWLGSGAQGAVFSGKL---------RSEIVAVKKVR-EQKETDIRHL-- 303
WE+P + + + LG GA G V + R VAVK ++ + E D+ L
Sbjct: 8 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS 67
Query: 304 ----RKL--NHPNIVKFKGVCTQ-APCYCIV-------------------MEYCAYGPLY 337
K+ H NI+ G CTQ P Y IV +EYC Y P +
Sbjct: 68 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYC-YNPSH 126
Query: 338 NLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR 397
N E++ + L + A Q+A GM YL SK+ IHRDL + NVL+ KI+DFG R
Sbjct: 127 N---PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 183
Query: 398 -----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDV 451
++ K+T V WMAPE + + + + D+WS+G++LWE+ T +PY V
Sbjct: 184 DIHHIDYYKKTTNGRLP--VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 241
Query: 452 DSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
++ + + PS C + ++M+ CW PS RP+FKQ++ LD
Sbjct: 242 PVEE-LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 292
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
Query: 177 VLIGSKEEAKISDFGTCRE-----WNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ KI+DFG R+ + K+T V WMAPE + + + + D+W
Sbjct: 166 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP--VKWMAPEALFDRIYTHQSDVW 221
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 135/275 (49%), Gaps = 30/275 (10%)
Query: 257 EIPFESISDLQWLGSGAQGAVFSGKLRSEI-------VAVKKVREQKETDIR-------- 301
E+ E I+ L+ LG G+ G V+ G R I VAVK V E R
Sbjct: 12 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 71
Query: 302 HLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK-------DGEEVPP---QRL 351
++ ++V+ GV ++ +VME A+G L + L+ + PP Q +
Sbjct: 72 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 131
Query: 352 YNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCRE-WNNKSTKMSFAG 410
A +IA GM YL++K+ +HRDL + N ++ KI DFG R+ + + G
Sbjct: 132 IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKG 191
Query: 411 T--VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHL 467
V WMAPE +++ + D+WS+G+VLWE+ + E PY+ + + ++ V +L
Sbjct: 192 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGG-YL 250
Query: 468 PIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHL 502
P CP+ LM+MCW P RP+F +I++ L
Sbjct: 251 DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 285
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 133/265 (50%), Gaps = 13/265 (4%)
Query: 256 WEIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVREQKETD------IRHLRKLNH 308
WEI + ++ L+ LG+G G V GK R + VA+K ++E ++ + + L+H
Sbjct: 3 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSH 62
Query: 309 PNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKD-GEEVPPQRLYNWARQIAAGMNYLHS 367
+V+ GVCT+ I+ EY A G L N L++ Q+L + + M YL S
Sbjct: 63 EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES 122
Query: 368 KQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT--VAWMAPEVIRNEQC 425
KQ +HRDL + N L+ + K+SDFG R + S V W PEV+ +
Sbjct: 123 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF 182
Query: 426 SDKIDIWSYGIVLWELLTC-ETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMC 484
S K DIW++G+++WE+ + + PY+ +S + + L L P + +M C
Sbjct: 183 SSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI-AQGLRLYRPHLASEKVYTIMYSC 241
Query: 485 WSNAPSSRPSFKQILSH-LDIASQE 508
W RP+FK +LS+ LD+ +E
Sbjct: 242 WHEKADERPTFKILLSNILDVMDEE 266
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 178 LIGSKEEAKISDFGTCREWNNKSTKMSFAGT--VAWMAPEVIRNEQCSDKIDIW 229
L+ + K+SDFG R + S V W PEV+ + S K DIW
Sbjct: 136 LVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 189
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 141/290 (48%), Gaps = 45/290 (15%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFSGKL---------RSEIVAVKKVREQ-KETDIRHL- 303
+WE P + ++ + LG GA G V + + VAVK +++ E D+ L
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLV 88
Query: 304 -----RKL--NHPNIVKFKGVCTQ-APCYCIVMEYCAYGPLYNLLK-----------DGE 344
K+ H NI+ G CTQ P Y IV EY + G L L+ D
Sbjct: 89 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDIN 147
Query: 345 EVPPQR-----LYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREW 399
VP ++ L + Q+A GM YL S++ IHRDL + NVL+ KI+DFG R+
Sbjct: 148 RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 400 NN-----KSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDVDS 453
NN K+T V WMAPE + + + + D+WS+G+++WE+ T +PY +
Sbjct: 208 NNIDYYKKTTNGRLP--VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 265
Query: 454 SAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
++ + + P+ C + ++M+ CW PS RP+FKQ++ LD
Sbjct: 266 EE-LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
Score = 35.4 bits (80), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
Query: 177 VLIGSKEEAKISDFGTCREWNN-----KSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ KI+DFG R+ NN K+T V WMAPE + + + + D+W
Sbjct: 188 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP--VKWMAPEALFDRVYTHQSDVW 243
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 141/290 (48%), Gaps = 45/290 (15%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFSGKL---------RSEIVAVKKVREQ-KETDIRHL- 303
+WE P + ++ + LG GA G V + + VAVK +++ E D+ L
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLV 88
Query: 304 -----RKL--NHPNIVKFKGVCTQ-APCYCIVMEYCAYGPLYNLLK-----------DGE 344
K+ H NI+ G CTQ P Y IV EY + G L L+ D
Sbjct: 89 SEMEMMKMIGKHKNIITLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDIN 147
Query: 345 EVPPQR-----LYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREW 399
VP ++ L + Q+A GM YL S++ IHRDL + NVL+ KI+DFG R+
Sbjct: 148 RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 400 NN-----KSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDVDS 453
NN K+T V WMAPE + + + + D+WS+G+++WE+ T +PY +
Sbjct: 208 NNIDYYKKTTNGRLP--VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 265
Query: 454 SAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
++ + + P+ C + ++M+ CW PS RP+FKQ++ LD
Sbjct: 266 EE-LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
Score = 35.4 bits (80), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
Query: 177 VLIGSKEEAKISDFGTCREWNN-----KSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ KI+DFG R+ NN K+T V WMAPE + + + + D+W
Sbjct: 188 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP--VKWMAPEALFDRVYTHQSDVW 243
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 139/291 (47%), Gaps = 49/291 (16%)
Query: 256 WEIPFESISDLQWLGSGAQGAVFSGKL---------RSEIVAVKKVR-EQKETDIRHL-- 303
WE+P + + + LG GA G V + R VAVK ++ + E D+ L
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS 82
Query: 304 ----RKL--NHPNIVKFKGVCTQ-APCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNW-- 354
K+ H NI+ G CTQ P Y IV EY + G L L+ E PP Y++
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARE--PPGLEYSYNP 139
Query: 355 ----------------ARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR- 397
A Q+A GM YL SK+ IHRDL + NVL+ KI+DFG R
Sbjct: 140 SHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 199
Query: 398 ----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDVD 452
++ K+T V WMAPE + + + + D+WS+G++LWE+ T +PY V
Sbjct: 200 IHHIDYYKKTTNGRLP--VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 257
Query: 453 SSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
++ + + PS C + ++M+ CW PS RP+FKQ++ LD
Sbjct: 258 VEE-LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
Query: 177 VLIGSKEEAKISDFGTCRE-----WNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ KI+DFG R+ + K+T V WMAPE + + + + D+W
Sbjct: 181 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP--VKWMAPEALFDRIYTHQSDVW 236
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 141/290 (48%), Gaps = 45/290 (15%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFSGKL---------RSEIVAVKKVREQ-KETDIRHL- 303
+WE P + ++ + LG GA G V + + VAVK +++ E D+ L
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLV 88
Query: 304 -----RKL--NHPNIVKFKGVCTQ-APCYCIVMEYCAYGPLYNLLK-----------DGE 344
K+ H NI+ G CTQ P Y IV EY + G L L+ D
Sbjct: 89 SEMEMMKMIGKHKNIIHLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDIN 147
Query: 345 EVPPQR-----LYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREW 399
VP ++ L + Q+A GM YL S++ IHRDL + NVL+ KI+DFG R+
Sbjct: 148 RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 400 NN-----KSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDVDS 453
NN K+T V WMAPE + + + + D+WS+G+++WE+ T +PY +
Sbjct: 208 NNIDYYKKTTNGRLP--VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 265
Query: 454 SAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
++ + + P+ C + ++M+ CW PS RP+FKQ++ LD
Sbjct: 266 EE-LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
Query: 177 VLIGSKEEAKISDFGTCREWNN-----KSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ KI+DFG R+ NN K+T V WMAPE + + + + D+W
Sbjct: 188 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP--VKWMAPEALFDRVYTHQSDVW 243
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 136/265 (51%), Gaps = 13/265 (4%)
Query: 256 WEIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVREQKETD------IRHLRKLNH 308
WEI + ++ L+ LG+G G V GK R + VA+K ++E ++ + + L+H
Sbjct: 19 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSH 78
Query: 309 PNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKD-GEEVPPQRLYNWARQIAAGMNYLHS 367
+V+ GVCT+ I+ EY A G L N L++ Q+L + + M YL S
Sbjct: 79 EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES 138
Query: 368 KQIIHRDLKSPNVLIGSKEEAKISDFGTCREW--NNKSTKMSFAGTVAWMAPEVIRNEQC 425
KQ +HRDL + N L+ + K+SDFG R + +++ + V W PEV+ +
Sbjct: 139 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKF 198
Query: 426 SDKIDIWSYGIVLWELLTC-ETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMC 484
S K DIW++G+++WE+ + + PY+ +S + + L L P + +M C
Sbjct: 199 SSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI-AQGLRLYRPHLASEKVYTIMYSC 257
Query: 485 WSNAPSSRPSFKQILSH-LDIASQE 508
W RP+FK +LS+ LD+ +E
Sbjct: 258 WHEKADERPTFKILLSNILDVMDEE 282
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 178 LIGSKEEAKISDFGTCREW--NNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
L+ + K+SDFG R + +++ + V W PEV+ + S K DIW
Sbjct: 152 LVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 205
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 133/265 (50%), Gaps = 13/265 (4%)
Query: 256 WEIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVREQKETD------IRHLRKLNH 308
WEI + ++ L+ LG+G G V GK R + VA+K ++E ++ + + L+H
Sbjct: 10 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSH 69
Query: 309 PNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKD-GEEVPPQRLYNWARQIAAGMNYLHS 367
+V+ GVCT+ I+ EY A G L N L++ Q+L + + M YL S
Sbjct: 70 EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES 129
Query: 368 KQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT--VAWMAPEVIRNEQC 425
KQ +HRDL + N L+ + K+SDFG R + S V W PEV+ +
Sbjct: 130 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF 189
Query: 426 SDKIDIWSYGIVLWELLTC-ETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMC 484
S K DIW++G+++WE+ + + PY+ +S + + L L P + +M C
Sbjct: 190 SSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI-AQGLRLYRPHLASEKVYTIMYSC 248
Query: 485 WSNAPSSRPSFKQILSH-LDIASQE 508
W RP+FK +LS+ LD+ +E
Sbjct: 249 WHEKADERPTFKILLSNILDVMDEE 273
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 178 LIGSKEEAKISDFGTCREWNNKSTKMSFAGT--VAWMAPEVIRNEQCSDKIDIW 229
L+ + K+SDFG R + S V W PEV+ + S K DIW
Sbjct: 143 LVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 196
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 140/287 (48%), Gaps = 41/287 (14%)
Query: 256 WEIPFESISDLQWLGSGAQGAVFSGKL---------RSEIVAVKKVR-EQKETDIRHL-- 303
WE+P + + + LG GA G V + R VAVK ++ + E D+ L
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS 82
Query: 304 ----RKL--NHPNIVKFKGVCTQ-APCYCIVMEYCAYGPLYNLLKDG------------- 343
K+ H NI+ G CTQ P Y IV EY + G L L+
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEFSFNPSH 141
Query: 344 ---EEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWN 400
E++ + L + A Q+A GM YL SK+ IHRDL + NVL+ KI+DFG R+ +
Sbjct: 142 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 201
Query: 401 N-KSTKMSFAG--TVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDVDSSAI 456
+ K + G V WMAPE + + + + D+WS+G++LWE+ T +PY V
Sbjct: 202 HIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE- 260
Query: 457 IWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
++ + + PS C + ++M+ CW PS RP+FKQ++ LD
Sbjct: 261 LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 177 VLIGSKEEAKISDFGTCREWNN-KSTKMSFAG--TVAWMAPEVIRNEQCSDKIDIW 229
VL+ KI+DFG R+ ++ K + G V WMAPE + + + + D+W
Sbjct: 181 VLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVW 236
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 133/265 (50%), Gaps = 13/265 (4%)
Query: 256 WEIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVREQKETD------IRHLRKLNH 308
WEI + ++ L+ LG+G G V GK R + VA+K ++E ++ + + L+H
Sbjct: 19 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSH 78
Query: 309 PNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKD-GEEVPPQRLYNWARQIAAGMNYLHS 367
+V+ GVCT+ I+ EY A G L N L++ Q+L + + M YL S
Sbjct: 79 EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES 138
Query: 368 KQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT--VAWMAPEVIRNEQC 425
KQ +HRDL + N L+ + K+SDFG R + S V W PEV+ +
Sbjct: 139 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF 198
Query: 426 SDKIDIWSYGIVLWELLTC-ETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMC 484
S K DIW++G+++WE+ + + PY+ +S + + L L P + +M C
Sbjct: 199 SSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI-AQGLRLYRPHLASEKVYTIMYSC 257
Query: 485 WSNAPSSRPSFKQILSH-LDIASQE 508
W RP+FK +LS+ LD+ +E
Sbjct: 258 WHEKADERPTFKILLSNILDVMDEE 282
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 178 LIGSKEEAKISDFGTCREWNNKSTKMSFAGT--VAWMAPEVIRNEQCSDKIDIW 229
L+ + K+SDFG R + S V W PEV+ + S K DIW
Sbjct: 152 LVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 205
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 141/288 (48%), Gaps = 41/288 (14%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFSGKL---------RSEIVAVKKVREQ-KETDIRHL- 303
+WE P + ++ + LG GA G V + + VAVK +++ E D+ L
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLV 88
Query: 304 -----RKL--NHPNIVKFKGVCTQ-APCYCIVMEYCAYGPLYNLLK-----------DGE 344
K+ H NI+ G CTQ P Y IV EY + G L L+ D
Sbjct: 89 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDIN 147
Query: 345 EVPPQR-----LYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREW 399
VP ++ L + Q+A GM YL S++ IHRDL + NVL+ KI+DFG R+
Sbjct: 148 RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 400 NN-KSTKMSFAG--TVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDVDSSA 455
NN K + G V WMAPE + + + + D+WS+G+++WE+ T +PY +
Sbjct: 208 NNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 456 IIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
++ + + P+ C + ++M+ CW PS RP+FKQ++ LD
Sbjct: 268 -LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 177 VLIGSKEEAKISDFGTCREWNN-KSTKMSFAG--TVAWMAPEVIRNEQCSDKIDIW 229
VL+ KI+DFG R+ NN K + G V WMAPE + + + + D+W
Sbjct: 188 VLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVW 243
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 140/289 (48%), Gaps = 45/289 (15%)
Query: 256 WEIPFESISDLQWLGSGAQGAVFSGKL---------RSEIVAVKKVR-EQKETDIRHL-- 303
WE+P + + + LG GA G V + R VAVK ++ + E D+ L
Sbjct: 16 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS 75
Query: 304 ----RKL--NHPNIVKFKGVCTQ-APCYCIVMEYCAYGPL---------------YNLLK 341
K+ H NI+ G CTQ P Y IV EY + G L YN
Sbjct: 76 EMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSH 134
Query: 342 DGEE-VPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--- 397
+ EE + + L + A Q+A GM YL SK+ IHRDL + NVL+ KI+DFG R
Sbjct: 135 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 194
Query: 398 --EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDVDSS 454
++ K+T V WMAPE + + + + D+WS+G++LWE+ T +PY V
Sbjct: 195 HIDYYKKTTNGRLP--VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 252
Query: 455 AIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
++ + + PS C + ++M+ CW PS RP+FKQ++ LD
Sbjct: 253 E-LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 300
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
Query: 177 VLIGSKEEAKISDFGTCRE-----WNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ KI+DFG R+ + K+T V WMAPE + + + + D+W
Sbjct: 174 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP--VKWMAPEALFDRIYTHQSDVW 229
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 140/289 (48%), Gaps = 45/289 (15%)
Query: 256 WEIPFESISDLQWLGSGAQGAVFSGKL---------RSEIVAVKKVR-EQKETDIRHL-- 303
WE+P + + + LG GA G V + R VAVK ++ + E D+ L
Sbjct: 12 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS 71
Query: 304 ----RKL--NHPNIVKFKGVCTQ-APCYCIVMEYCAYGPL---------------YNLLK 341
K+ H NI+ G CTQ P Y IV EY + G L YN
Sbjct: 72 EMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSH 130
Query: 342 DGEE-VPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--- 397
+ EE + + L + A Q+A GM YL SK+ IHRDL + NVL+ KI+DFG R
Sbjct: 131 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 190
Query: 398 --EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDVDSS 454
++ K+T V WMAPE + + + + D+WS+G++LWE+ T +PY V
Sbjct: 191 HIDYYKKTTNGRLP--VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 248
Query: 455 AIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
++ + + PS C + ++M+ CW PS RP+FKQ++ LD
Sbjct: 249 E-LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 296
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
Query: 177 VLIGSKEEAKISDFGTCRE-----WNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ KI+DFG R+ + K+T V WMAPE + + + + D+W
Sbjct: 170 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP--VKWMAPEALFDRIYTHQSDVW 225
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 141/290 (48%), Gaps = 45/290 (15%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFSGKL---------RSEIVAVKKVREQ-KETDIRHL- 303
+WE P + ++ + LG GA G V + + VAVK +++ E D+ L
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLV 88
Query: 304 -----RKL--NHPNIVKFKGVCTQ-APCYCIVMEYCAYGPLYNLLK-----------DGE 344
K+ H NI+ G CTQ P Y IV EY + G L L+ D
Sbjct: 89 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDIN 147
Query: 345 EVPPQR-----LYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREW 399
VP ++ L + Q+A GM YL S++ IHRDL + NVL+ +I+DFG R+
Sbjct: 148 RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDI 207
Query: 400 NN-----KSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDVDS 453
NN K+T V WMAPE + + + + D+WS+G+++WE+ T +PY +
Sbjct: 208 NNIDYYKKTTNGRLP--VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 265
Query: 454 SAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
++ + + P+ C + ++M+ CW PS RP+FKQ++ LD
Sbjct: 266 EE-LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
Query: 177 VLIGSKEEAKISDFGTCREWNN-----KSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ +I+DFG R+ NN K+T V WMAPE + + + + D+W
Sbjct: 188 VLVTENNVMRIADFGLARDINNIDYYKKTTNGRLP--VKWMAPEALFDRVYTHQSDVW 243
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 129/261 (49%), Gaps = 16/261 (6%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFSGK-LRSEIVAVKKVRE--QKETDIRH----LRKLN 307
+W I ++ +Q +GSG G V G L + VA+K +RE E D + KL+
Sbjct: 4 KWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS 63
Query: 308 HPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV-PPQRLYNWARQIAAGMNYLH 366
HP +V+ GVC + C+V E+ +G L + L+ + + L + GM YL
Sbjct: 64 HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 123
Query: 367 SKQIIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRN 422
+IHRDL + N L+G + K+SDFG R + ST F V W +PEV
Sbjct: 124 EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP--VKWASPEVFSF 181
Query: 423 EQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLM 481
+ S K D+WS+G+++WE+ + + PY++ +S ++ + S+ L P +M
Sbjct: 182 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI-STGFRLYKPRLASTHVYQIM 240
Query: 482 KMCWSNAPSSRPSFKQILSHL 502
CW P RP+F ++L L
Sbjct: 241 NHCWRERPEDRPAFSRLLRQL 261
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Query: 178 LIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
L+G + K+SDFG R + ST F V W +PEV + S K D+W
Sbjct: 138 LVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP--VKWASPEVFSFSRYSSKSDVW 191
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 140/289 (48%), Gaps = 45/289 (15%)
Query: 256 WEIPFESISDLQWLGSGAQGAVFSGKL---------RSEIVAVKKVR-EQKETDIRHL-- 303
WE+P + + + LG GA G V + R VAVK ++ + E D+ L
Sbjct: 15 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS 74
Query: 304 ----RKL--NHPNIVKFKGVCTQ-APCYCIVMEYCAYGPL---------------YNLLK 341
K+ H NI+ G CTQ P Y IV EY + G L YN
Sbjct: 75 EMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSH 133
Query: 342 DGEE-VPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--- 397
+ EE + + L + A Q+A GM YL SK+ IHRDL + NVL+ KI+DFG R
Sbjct: 134 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 193
Query: 398 --EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDVDSS 454
++ K+T V WMAPE + + + + D+WS+G++LWE+ T +PY V
Sbjct: 194 HIDYYKKTTNGRLP--VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 251
Query: 455 AIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
++ + + PS C + ++M+ CW PS RP+FKQ++ LD
Sbjct: 252 E-LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 299
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
Query: 177 VLIGSKEEAKISDFGTCRE-----WNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ KI+DFG R+ + K+T V WMAPE + + + + D+W
Sbjct: 173 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP--VKWMAPEALFDRIYTHQSDVW 228
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 140/289 (48%), Gaps = 45/289 (15%)
Query: 256 WEIPFESISDLQWLGSGAQGAVFSGKL---------RSEIVAVKKVR-EQKETDIRHL-- 303
WE+P + + + LG GA G V + R VAVK ++ + E D+ L
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS 82
Query: 304 ----RKL--NHPNIVKFKGVCTQ-APCYCIVMEYCAYGPL---------------YNLLK 341
K+ H NI+ G CTQ P Y IV EY + G L YN
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSH 141
Query: 342 DGEE-VPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--- 397
+ EE + + L + A Q+A GM YL SK+ IHRDL + NVL+ KI+DFG R
Sbjct: 142 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 201
Query: 398 --EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDVDSS 454
++ K+T V WMAPE + + + + D+WS+G++LWE+ T +PY V
Sbjct: 202 HIDYYKKTTNGRLP--VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 259
Query: 455 AIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
++ + + PS C + ++M+ CW PS RP+FKQ++ LD
Sbjct: 260 E-LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
Query: 177 VLIGSKEEAKISDFGTCRE-----WNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ KI+DFG R+ + K+T V WMAPE + + + + D+W
Sbjct: 181 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP--VKWMAPEALFDRIYTHQSDVW 236
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 129/261 (49%), Gaps = 16/261 (6%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFSGK-LRSEIVAVKKVRE--QKETDIRH----LRKLN 307
+W I ++ +Q +GSG G V G L + VA+K +RE E D + KL+
Sbjct: 2 KWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS 61
Query: 308 HPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV-PPQRLYNWARQIAAGMNYLH 366
HP +V+ GVC + C+V E+ +G L + L+ + + L + GM YL
Sbjct: 62 HPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 121
Query: 367 SKQIIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRN 422
+IHRDL + N L+G + K+SDFG R + ST F V W +PEV
Sbjct: 122 EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP--VKWASPEVFSF 179
Query: 423 EQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLM 481
+ S K D+WS+G+++WE+ + + PY++ +S ++ + S+ L P +M
Sbjct: 180 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI-STGFRLYKPRLASTHVYQIM 238
Query: 482 KMCWSNAPSSRPSFKQILSHL 502
CW P RP+F ++L L
Sbjct: 239 NHCWRERPEDRPAFSRLLRQL 259
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Query: 178 LIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
L+G + K+SDFG R + ST F V W +PEV + S K D+W
Sbjct: 136 LVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP--VKWASPEVFSFSRYSSKSDVW 189
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 141/300 (47%), Gaps = 43/300 (14%)
Query: 246 EFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS----GKLRSEI---VAVKKVREQKET 298
+F+ + +WE P E++ + LGSGA G V + G ++ + VAVK ++E+ ++
Sbjct: 30 DFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADS 89
Query: 299 --------DIRHLRKL-NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE---- 345
+++ + +L +H NIV G CT + ++ EYC YG L N L+ E
Sbjct: 90 SEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSE 149
Query: 346 -------------------VPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKE 386
+ + L +A Q+A GM +L K +HRDL + NVL+ +
Sbjct: 150 DEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGK 209
Query: 387 EAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLT 443
KI DFG R+ + S + V WMAPE + + K D+WSYGI+LWE+ +
Sbjct: 210 VVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
Query: 444 CET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHL 502
PY + A + + + + P + ++M+ CW+ RPSF + S L
Sbjct: 270 LGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL 329
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIW 229
VL+ + KI DFG R+ + S + V WMAPE + + K D+W
Sbjct: 203 VLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVW 258
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 140/289 (48%), Gaps = 45/289 (15%)
Query: 256 WEIPFESISDLQWLGSGAQGAVFSGKL---------RSEIVAVKKVR-EQKETDIRHL-- 303
WE+P + + + LG GA G V + R VAVK ++ + E D+ L
Sbjct: 64 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS 123
Query: 304 ----RKL--NHPNIVKFKGVCTQ-APCYCIVMEYCAYGPL---------------YNLLK 341
K+ H NI+ G CTQ P Y IV EY + G L YN
Sbjct: 124 EMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSH 182
Query: 342 DGEE-VPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR--- 397
+ EE + + L + A Q+A GM YL SK+ IHRDL + NVL+ KI+DFG R
Sbjct: 183 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 242
Query: 398 --EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDVDSS 454
++ K+T V WMAPE + + + + D+WS+G++LWE+ T +PY V
Sbjct: 243 HIDYYKKTTNGRLP--VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 300
Query: 455 AIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
++ + + PS C + ++M+ CW PS RP+FKQ++ LD
Sbjct: 301 E-LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 348
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
Query: 177 VLIGSKEEAKISDFGTCRE-----WNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ KI+DFG R+ + K+T V WMAPE + + + + D+W
Sbjct: 222 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP--VKWMAPEALFDRIYTHQSDVW 277
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 126/253 (49%), Gaps = 16/253 (6%)
Query: 263 ISDLQWLGSGAQGAVFSGK-LRSEIVAVKKVRE--QKETDIRH----LRKLNHPNIVKFK 315
++ +Q +GSG G V G L + VA+K +RE E D + KL+HP +V+
Sbjct: 9 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLY 68
Query: 316 GVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV-PPQRLYNWARQIAAGMNYLHSKQIIHRD 374
GVC + C+V E+ +G L + L+ + + L + GM YL +IHRD
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHRD 128
Query: 375 LKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKID 430
L + N L+G + K+SDFG R + ST F V W +PEV + S K D
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP--VKWASPEVFSFSRYSSKSD 186
Query: 431 IWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAP 489
+WS+G+++WE+ + + PY++ +S ++ + S+ L P +M CW P
Sbjct: 187 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDI-STGFRLYKPRLASTHVYQIMNHCWKERP 245
Query: 490 SSRPSFKQILSHL 502
RP+F ++L L
Sbjct: 246 EDRPAFSRLLRQL 258
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Query: 178 LIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
L+G + K+SDFG R + ST F V W +PEV + S K D+W
Sbjct: 135 LVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP--VKWASPEVFSFSRYSSKSDVW 188
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 148/307 (48%), Gaps = 46/307 (14%)
Query: 238 TSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKL---------RSEIVA 288
T ++A + E++ +WE P + ++ + LG G G V + + VA
Sbjct: 59 TPMLAGVSEYE-LPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVA 117
Query: 289 VKKVREQ-KETDIRHL------RKL--NHPNIVKFKGVCTQ-APCYCIVMEYCAYGPLYN 338
VK +++ E D+ L K+ H NI+ G CTQ P Y IV EY + G L
Sbjct: 118 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLRE 176
Query: 339 LLK-----------DGEEVPPQR-----LYNWARQIAAGMNYLHSKQIIHRDLKSPNVLI 382
L+ D VP ++ L + Q+A GM YL S++ IHRDL + NVL+
Sbjct: 177 YLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV 236
Query: 383 GSKEEAKISDFGTCREWNN-----KSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIV 437
KI+DFG R+ NN K+T V WMAPE + + + + D+WS+G++
Sbjct: 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLP--VKWMAPEALFDRVYTHQSDVWSFGVL 294
Query: 438 LWELLTC-ETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFK 496
+WE+ T +PY + ++ + + P+ C + ++M+ CW PS RP+FK
Sbjct: 295 MWEIFTLGGSPYPGIPVEE-LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFK 353
Query: 497 QILSHLD 503
Q++ LD
Sbjct: 354 QLVEDLD 360
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
Query: 177 VLIGSKEEAKISDFGTCREWNN-----KSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ KI+DFG R+ NN K+T V WMAPE + + + + D+W
Sbjct: 234 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP--VKWMAPEALFDRVYTHQSDVW 289
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 133/266 (50%), Gaps = 13/266 (4%)
Query: 256 WEIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVREQKETD------IRHLRKLNH 308
WEI + ++ L+ LG+G G V GK R + VA+K ++E ++ + + L+H
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSH 63
Query: 309 PNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKD-GEEVPPQRLYNWARQIAAGMNYLHS 367
+V+ GVCT+ I+ EY A G L N L++ Q+L + + M YL S
Sbjct: 64 EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES 123
Query: 368 KQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT--VAWMAPEVIRNEQC 425
KQ +HRDL + N L+ + K+SDFG R + S V W PEV+ +
Sbjct: 124 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF 183
Query: 426 SDKIDIWSYGIVLWELLTC-ETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMC 484
S K DIW++G+++WE+ + + PY+ +S + + L L P + +M C
Sbjct: 184 SSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI-AQGLRLYRPHLASEKVYTIMYSC 242
Query: 485 WSNAPSSRPSFKQILSH-LDIASQEV 509
W RP+FK +LS+ LD+ + +
Sbjct: 243 WHEKADERPTFKILLSNILDVMDENL 268
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 178 LIGSKEEAKISDFGTCREWNNKSTKMSFAGT--VAWMAPEVIRNEQCSDKIDIW 229
L+ + K+SDFG R + S V W PEV+ + S K DIW
Sbjct: 137 LVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 190
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 148/307 (48%), Gaps = 46/307 (14%)
Query: 238 TSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKL---------RSEIVA 288
T ++A + E++ +WE P + ++ + LG G G V + + VA
Sbjct: 5 TPMLAGVSEYE-LPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVA 63
Query: 289 VKKVREQ-KETDIRHL------RKL--NHPNIVKFKGVCTQ-APCYCIVMEYCAYGPLYN 338
VK +++ E D+ L K+ H NI+ G CTQ P Y IV EY + G L
Sbjct: 64 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLRE 122
Query: 339 LLK-----------DGEEVPPQR-----LYNWARQIAAGMNYLHSKQIIHRDLKSPNVLI 382
L+ D VP ++ L + Q+A GM YL S++ IHRDL + NVL+
Sbjct: 123 YLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV 182
Query: 383 GSKEEAKISDFGTCREWNN-----KSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIV 437
KI+DFG R+ NN K+T V WMAPE + + + + D+WS+G++
Sbjct: 183 TENNVMKIADFGLARDINNIDYYKKTTNGRLP--VKWMAPEALFDRVYTHQSDVWSFGVL 240
Query: 438 LWELLTC-ETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFK 496
+WE+ T +PY + ++ + + P+ C + ++M+ CW PS RP+FK
Sbjct: 241 MWEIFTLGGSPYPGIPVEE-LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFK 299
Query: 497 QILSHLD 503
Q++ LD
Sbjct: 300 QLVEDLD 306
Score = 35.4 bits (80), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
Query: 177 VLIGSKEEAKISDFGTCREWNN-----KSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ KI+DFG R+ NN K+T V WMAPE + + + + D+W
Sbjct: 180 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP--VKWMAPEALFDRVYTHQSDVW 235
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 140/290 (48%), Gaps = 45/290 (15%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFSGKL---------RSEIVAVKKVREQ-KETDIRHL- 303
+WE P + ++ + LG G G V + + VAVK +++ E D+ L
Sbjct: 16 KWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLV 75
Query: 304 -----RKL--NHPNIVKFKGVCTQ-APCYCIVMEYCAYGPLYNLLK-----------DGE 344
K+ H NI+ G CTQ P Y IV EY + G L L+ D
Sbjct: 76 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDIN 134
Query: 345 EVPPQR-----LYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREW 399
VP ++ L + Q+A GM YL S++ IHRDL + NVL+ KI+DFG R+
Sbjct: 135 RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDI 194
Query: 400 NN-----KSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDVDS 453
NN K+T V WMAPE + + + + D+WS+G+++WE+ T +PY +
Sbjct: 195 NNIDYYKKTTNGRLP--VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 252
Query: 454 SAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
++ + + P+ C + ++M+ CW PS RP+FKQ++ LD
Sbjct: 253 EE-LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 301
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 53/126 (42%), Gaps = 17/126 (13%)
Query: 114 KTNIQE--RSEVKSATHYQVDLTGMAEQ---VRLSIPPQYQLELIGGPYWFLAGCTTPDA 168
K N++E R+ Y D+ + E+ + + YQL G Y C D
Sbjct: 112 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLAR-GMEYLASQKCIHRDL 170
Query: 169 LAESIGLGVLIGSKEEAKISDFGTCREWNN-----KSTKMSFAGTVAWMAPEVIRNEQCS 223
A + VL+ KI+DFG R+ NN K+T V WMAPE + + +
Sbjct: 171 TARN----VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP--VKWMAPEALFDRVYT 224
Query: 224 DKIDIW 229
+ D+W
Sbjct: 225 HQSDVW 230
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 126/253 (49%), Gaps = 16/253 (6%)
Query: 263 ISDLQWLGSGAQGAVFSGK-LRSEIVAVKKVRE--QKETDIRH----LRKLNHPNIVKFK 315
++ +Q +GSG G V G L + VA+K +RE E D + KL+HP +V+
Sbjct: 9 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLY 68
Query: 316 GVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV-PPQRLYNWARQIAAGMNYLHSKQIIHRD 374
GVC + C+V E+ +G L + L+ + + L + GM YL +IHRD
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRD 128
Query: 375 LKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKID 430
L + N L+G + K+SDFG R + ST F V W +PEV + S K D
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP--VKWASPEVFSFSRYSSKSD 186
Query: 431 IWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAP 489
+WS+G+++WE+ + + PY++ +S ++ + S+ L P +M CW P
Sbjct: 187 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDI-STGFRLYKPRLASTHVYQIMNHCWKERP 245
Query: 490 SSRPSFKQILSHL 502
RP+F ++L L
Sbjct: 246 EDRPAFSRLLRQL 258
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Query: 178 LIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
L+G + K+SDFG R + ST F V W +PEV + S K D+W
Sbjct: 135 LVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP--VKWASPEVFSFSRYSSKSDVW 188
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 140/290 (48%), Gaps = 45/290 (15%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFSGKL---------RSEIVAVKKVREQ-KETDIRHL- 303
+WE P + ++ + LG GA G V + + VAVK +++ E D+ L
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLV 88
Query: 304 -----RKL--NHPNIVKFKGVCTQ-APCYCIVMEYCAYGPLYNLLK-----------DGE 344
K+ H NI+ G CTQ P Y IV Y + G L L+ D
Sbjct: 89 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIV-AYASKGNLREYLRARRPPGMEYSYDIN 147
Query: 345 EVPPQR-----LYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREW 399
VP ++ L + Q+A GM YL S++ IHRDL + NVL+ KI+DFG R+
Sbjct: 148 RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 400 NN-----KSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDVDS 453
NN K+T V WMAPE + + + + D+WS+G+++WE+ T +PY +
Sbjct: 208 NNIDYYKKTTNGRLP--VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 265
Query: 454 SAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
++ + + P+ C + ++M+ CW PS RP+FKQ++ LD
Sbjct: 266 EE-LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
Score = 35.4 bits (80), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
Query: 177 VLIGSKEEAKISDFGTCREWNN-----KSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ KI+DFG R+ NN K+T V WMAPE + + + + D+W
Sbjct: 188 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP--VKWMAPEALFDRVYTHQSDVW 243
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 130/276 (47%), Gaps = 35/276 (12%)
Query: 266 LQW-LGSGAQGAVFSGKLRS-------EIVAVKKVREQKET-------DIRHLRKLNHPN 310
L+W LG GA G VF + + +VAVK ++E E+ + L L H +
Sbjct: 22 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 81
Query: 311 IVKFKGVCTQAPCYCIVMEYC----------AYGPLYNLLKDGEEVPPQ-----RLYNWA 355
IV+F GVCT+ +V EY ++GP LL GE+V P +L A
Sbjct: 82 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 141
Query: 356 RQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---V 412
Q+AAGM YL +HRDL + N L+G KI DFG R+ + T +
Sbjct: 142 SQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 413 AWMAPEVIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPS 471
WM PE I + + + D+WS+G+VLWE+ T + P+ + ++ I + + L P
Sbjct: 202 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCI-TQGRELERPR 260
Query: 472 TCPDGFQLLMKMCWSNAPSSRPSFKQILSHLDIASQ 507
CP +M+ CW P R S K + + L +Q
Sbjct: 261 ACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 296
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 140/290 (48%), Gaps = 45/290 (15%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFSGKL---------RSEIVAVKKVREQ-KETDIRHL- 303
+WE P + ++ + LG G G V + + VAVK +++ E D+ L
Sbjct: 18 KWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLV 77
Query: 304 -----RKL--NHPNIVKFKGVCTQ-APCYCIVMEYCAYGPLYNLLK-----------DGE 344
K+ H NI+ G CTQ P Y IV EY + G L L+ D
Sbjct: 78 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDIN 136
Query: 345 EVPPQR-----LYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREW 399
VP ++ L + Q+A GM YL S++ IHRDL + NVL+ KI+DFG R+
Sbjct: 137 RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 196
Query: 400 NN-----KSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDVDS 453
NN K+T V WMAPE + + + + D+WS+G+++WE+ T +PY +
Sbjct: 197 NNIDYYKKTTNGRLP--VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 254
Query: 454 SAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
++ + + P+ C + ++M+ CW PS RP+FKQ++ LD
Sbjct: 255 EE-LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 303
Score = 35.4 bits (80), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
Query: 177 VLIGSKEEAKISDFGTCREWNN-----KSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ KI+DFG R+ NN K+T V WMAPE + + + + D+W
Sbjct: 177 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP--VKWMAPEALFDRVYTHQSDVW 232
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 130/276 (47%), Gaps = 35/276 (12%)
Query: 266 LQW-LGSGAQGAVFSGKLRS-------EIVAVKKVREQKET-------DIRHLRKLNHPN 310
L+W LG GA G VF + + +VAVK ++E E+ + L L H +
Sbjct: 16 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 75
Query: 311 IVKFKGVCTQAPCYCIVMEYC----------AYGPLYNLLKDGEEVPPQ-----RLYNWA 355
IV+F GVCT+ +V EY ++GP LL GE+V P +L A
Sbjct: 76 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 135
Query: 356 RQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---V 412
Q+AAGM YL +HRDL + N L+G KI DFG R+ + T +
Sbjct: 136 SQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 413 AWMAPEVIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPS 471
WM PE I + + + D+WS+G+VLWE+ T + P+ + ++ I + + L P
Sbjct: 196 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCI-TQGRELERPR 254
Query: 472 TCPDGFQLLMKMCWSNAPSSRPSFKQILSHLDIASQ 507
CP +M+ CW P R S K + + L +Q
Sbjct: 255 ACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 290
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 126/253 (49%), Gaps = 16/253 (6%)
Query: 263 ISDLQWLGSGAQGAVFSGK-LRSEIVAVKKVRE--QKETDIRH----LRKLNHPNIVKFK 315
++ +Q +GSG G V G L + VA+K +RE E D + KL+HP +V+
Sbjct: 7 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLY 66
Query: 316 GVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV-PPQRLYNWARQIAAGMNYLHSKQIIHRD 374
GVC + C+V E+ +G L + L+ + + L + GM YL +IHRD
Sbjct: 67 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRD 126
Query: 375 LKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKID 430
L + N L+G + K+SDFG R + ST F V W +PEV + S K D
Sbjct: 127 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP--VKWASPEVFSFSRYSSKSD 184
Query: 431 IWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAP 489
+WS+G+++WE+ + + PY++ +S ++ + S+ L P +M CW P
Sbjct: 185 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDI-STGFRLYKPRLASTHVYQIMNHCWKERP 243
Query: 490 SSRPSFKQILSHL 502
RP+F ++L L
Sbjct: 244 EDRPAFSRLLRQL 256
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Query: 178 LIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
L+G + K+SDFG R + ST F V W +PEV + S K D+W
Sbjct: 133 LVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP--VKWASPEVFSFSRYSSKSDVW 186
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 130/276 (47%), Gaps = 35/276 (12%)
Query: 266 LQW-LGSGAQGAVFSGKLRS-------EIVAVKKVREQKET-------DIRHLRKLNHPN 310
L+W LG GA G VF + + +VAVK ++E E+ + L L H +
Sbjct: 45 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 104
Query: 311 IVKFKGVCTQAPCYCIVMEYC----------AYGPLYNLLKDGEEVPPQ-----RLYNWA 355
IV+F GVCT+ +V EY ++GP LL GE+V P +L A
Sbjct: 105 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 164
Query: 356 RQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---V 412
Q+AAGM YL +HRDL + N L+G KI DFG R+ + T +
Sbjct: 165 SQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 413 AWMAPEVIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPS 471
WM PE I + + + D+WS+G+VLWE+ T + P+ + ++ I + + L P
Sbjct: 225 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCI-TQGRELERPR 283
Query: 472 TCPDGFQLLMKMCWSNAPSSRPSFKQILSHLDIASQ 507
CP +M+ CW P R S K + + L +Q
Sbjct: 284 ACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 140/290 (48%), Gaps = 45/290 (15%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFSGKL---------RSEIVAVKKVREQ-KETDIRHL- 303
+WE P + ++ + LG GA G V + + VAVK +++ E D+ L
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLV 88
Query: 304 -----RKL--NHPNIVKFKGVCTQ-APCYCIVMEYCAYGPLYNLLK-----------DGE 344
K+ H NI+ G CTQ P Y IV Y + G L L+ D
Sbjct: 89 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIV-GYASKGNLREYLRARRPPGMEYSYDIN 147
Query: 345 EVPPQR-----LYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREW 399
VP ++ L + Q+A GM YL S++ IHRDL + NVL+ KI+DFG R+
Sbjct: 148 RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 400 NN-----KSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDVDS 453
NN K+T V WMAPE + + + + D+WS+G+++WE+ T +PY +
Sbjct: 208 NNIDYYKKTTNGRLP--VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 265
Query: 454 SAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
++ + + P+ C + ++M+ CW PS RP+FKQ++ LD
Sbjct: 266 EE-LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
Score = 35.4 bits (80), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
Query: 177 VLIGSKEEAKISDFGTCREWNN-----KSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ KI+DFG R+ NN K+T V WMAPE + + + + D+W
Sbjct: 188 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP--VKWMAPEALFDRVYTHQSDVW 243
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 129/258 (50%), Gaps = 12/258 (4%)
Query: 256 WEIPFESISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVREQKETD------IRHLRKLNH 308
WEI + ++ L+ LG+G G V GK R + VA+K ++E ++ + + L+H
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSH 63
Query: 309 PNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKD-GEEVPPQRLYNWARQIAAGMNYLHS 367
+V+ GVCT+ I+ EY A G L N L++ Q+L + + M YL S
Sbjct: 64 EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES 123
Query: 368 KQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT--VAWMAPEVIRNEQC 425
KQ +HRDL + N L+ + K+SDFG R + S V W PEV+ +
Sbjct: 124 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKF 183
Query: 426 SDKIDIWSYGIVLWELLTC-ETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMC 484
S K DIW++G+++WE+ + + PY+ +S + + L L P + +M C
Sbjct: 184 SSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI-AQGLRLYRPHLASEKVYTIMYSC 242
Query: 485 WSNAPSSRPSFKQILSHL 502
W RP+FK +LS++
Sbjct: 243 WHEKADERPTFKILLSNI 260
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 178 LIGSKEEAKISDFGTCREWNNKSTKMSFAGT--VAWMAPEVIRNEQCSDKIDIW 229
L+ + K+SDFG R + S V W PEV+ + S K DIW
Sbjct: 137 LVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIW 190
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 130/277 (46%), Gaps = 36/277 (12%)
Query: 257 EIPFESISDLQWLGSGAQGAVFSGKLRSEIV----AVKKVREQKETD--------IRHLR 304
+I F+ + +G G G V +++ + + A+K+++E D + L
Sbjct: 26 DIKFQDV-----IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLC 80
Query: 305 KL-NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGE--EVPP------------- 348
KL +HPNI+ G C + +EY +G L + L+ E P
Sbjct: 81 KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 140
Query: 349 -QRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMS 407
Q+L ++A +A GM+YL KQ IHRDL + N+L+G AKI+DFG R K
Sbjct: 141 SQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTM 200
Query: 408 FAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDVDSSAIIWGVGSSSLH 466
V WMA E + + D+WSYG++LWE+++ TPY + + A ++
Sbjct: 201 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM-TCAELYEKLPQGYR 259
Query: 467 LPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
L P C D LM+ CW P RPSF QIL L+
Sbjct: 260 LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLN 296
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 23/53 (43%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+G AKI+DFG R K V WMA E + + D+W
Sbjct: 173 ILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVW 225
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 130/277 (46%), Gaps = 36/277 (12%)
Query: 257 EIPFESISDLQWLGSGAQGAVFSGKLRSEIV----AVKKVREQKETD--------IRHLR 304
+I F+ + +G G G V +++ + + A+K+++E D + L
Sbjct: 16 DIKFQDV-----IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLC 70
Query: 305 KL-NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGE--EVPP------------- 348
KL +HPNI+ G C + +EY +G L + L+ E P
Sbjct: 71 KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 130
Query: 349 -QRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMS 407
Q+L ++A +A GM+YL KQ IHRDL + N+L+G AKI+DFG R K
Sbjct: 131 SQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTM 190
Query: 408 FAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDVDSSAIIWGVGSSSLH 466
V WMA E + + D+WSYG++LWE+++ TPY + + A ++
Sbjct: 191 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM-TCAELYEKLPQGYR 249
Query: 467 LPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
L P C D LM+ CW P RPSF QIL L+
Sbjct: 250 LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLN 286
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 23/53 (43%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+G AKI+DFG R K V WMA E + + D+W
Sbjct: 163 ILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVW 215
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 131/253 (51%), Gaps = 21/253 (8%)
Query: 266 LQWLGSGAQGAVFSGKLRSE------IVAVKKVREQKETDIRH--------LRKLNHPNI 311
++ LGSGA G V+ G E VA+K++RE + +++P++
Sbjct: 22 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 81
Query: 312 VKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE-VPPQRLYNWARQIAAGMNYLHSKQI 370
+ G+C + ++M+ +G L + +++ ++ + Q L NW QIA GMNYL +++
Sbjct: 82 CRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 140
Query: 371 IHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSD 427
+HRDL + NVL+ + + KI+DFG + + + G + WMA E I + +
Sbjct: 141 VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 200
Query: 428 KIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWS 486
+ D+WSYG+ +WEL+T + PY + +S I + LP P C ++M+ CW
Sbjct: 201 QSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLPQPPICTIDVYMIMRKCWM 259
Query: 487 NAPSSRPSFKQIL 499
SRP F++++
Sbjct: 260 IDADSRPKFRELI 272
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 133/290 (45%), Gaps = 30/290 (10%)
Query: 248 KSFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-------VAVKKV----REQK 296
K+ + D E+P ++I+ ++ LG GA G V+ G++ VAVK + EQ
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 77
Query: 297 ETDIRH----LRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQ--- 349
E D + KLNH NIV+ GV Q+ I++E A G L + L++ P Q
Sbjct: 78 ELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 137
Query: 350 ----RLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLI---GSKEEAKISDFGTCREWNNK 402
L + AR IA G YL IHRD+ + N L+ G AKI DFG R+
Sbjct: 138 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 197
Query: 403 STKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAIIW 458
S V WM PE + K D WS+G++LWE+ + PY + ++
Sbjct: 198 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 257
Query: 459 GVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
V S P P CP +M CW + P RP+F IL ++ +Q+
Sbjct: 258 FVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 306
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 132/290 (45%), Gaps = 30/290 (10%)
Query: 248 KSFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-------VAVKKV----REQK 296
K+ + D E+P ++I+ ++ LG GA G V+ G++ VAVK + EQ
Sbjct: 32 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 91
Query: 297 ETDIRH----LRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQ--- 349
E D + K NH NIV+ GV Q+ I+ME A G L + L++ P Q
Sbjct: 92 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSS 151
Query: 350 ----RLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLI---GSKEEAKISDFGTCREWNNK 402
L + AR IA G YL IHRD+ + N L+ G AKI DFG R+
Sbjct: 152 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 211
Query: 403 STKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAIIW 458
S V WM PE + K D WS+G++LWE+ + PY + ++
Sbjct: 212 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 271
Query: 459 GVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
V S P P CP +M CW + P RP+F IL ++ +Q+
Sbjct: 272 FVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 320
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 132/290 (45%), Gaps = 30/290 (10%)
Query: 248 KSFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-------VAVKKV----REQK 296
K+ + D E+P ++I+ ++ LG GA G V+ G++ VAVK + EQ
Sbjct: 17 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 76
Query: 297 ETDIRH----LRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQ--- 349
E D + K NH NIV+ GV Q+ I+ME A G L + L++ P Q
Sbjct: 77 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSS 136
Query: 350 ----RLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLI---GSKEEAKISDFGTCREWNNK 402
L + AR IA G YL IHRD+ + N L+ G AKI DFG R+
Sbjct: 137 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 196
Query: 403 STKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAIIW 458
S V WM PE + K D WS+G++LWE+ + PY + ++
Sbjct: 197 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 256
Query: 459 GVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
V S P P CP +M CW + P RP+F IL ++ +Q+
Sbjct: 257 FVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 133/290 (45%), Gaps = 30/290 (10%)
Query: 248 KSFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-------VAVKKV----REQK 296
K+ + D E+P ++I+ ++ LG GA G V+ G++ VAVK + EQ
Sbjct: 32 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 91
Query: 297 ETDIRH----LRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQ--- 349
E D + KLNH NIV+ GV Q+ I++E A G L + L++ P Q
Sbjct: 92 ELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 151
Query: 350 ----RLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLI---GSKEEAKISDFGTCREWNNK 402
L + AR IA G YL IHRD+ + N L+ G AKI DFG R+
Sbjct: 152 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 211
Query: 403 STKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAIIW 458
S V WM PE + K D WS+G++LWE+ + PY + ++
Sbjct: 212 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 271
Query: 459 GVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
V S P P CP +M CW + P RP+F IL ++ +Q+
Sbjct: 272 FVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 320
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 130/253 (51%), Gaps = 21/253 (8%)
Query: 266 LQWLGSGAQGAVFSGKLRSE------IVAVKKVREQKETDIRH--------LRKLNHPNI 311
++ LGSGA G V+ G E VA+K++RE + +++P++
Sbjct: 21 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 80
Query: 312 VKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE-VPPQRLYNWARQIAAGMNYLHSKQI 370
+ G+C + ++M+ +G L + +++ ++ + Q L NW QIA GMNYL +++
Sbjct: 81 CRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 139
Query: 371 IHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSD 427
+HRDL + NVL+ + + KI+DFG + + + G + WMA E I + +
Sbjct: 140 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 199
Query: 428 KIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWS 486
+ D+WSYG+ +WEL+T + PY + +S I + LP P C ++M CW
Sbjct: 200 QSDVWSYGVTVWELMTFGSKPYDGIPASE-ISSILEKGERLPQPPICTIDVYMIMVKCWM 258
Query: 487 NAPSSRPSFKQIL 499
SRP F++++
Sbjct: 259 IDADSRPKFRELI 271
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 126/253 (49%), Gaps = 16/253 (6%)
Query: 263 ISDLQWLGSGAQGAVFSGK-LRSEIVAVKKVRE--QKETDIRH----LRKLNHPNIVKFK 315
++ +Q +GSG G V G L + VA+K ++E E D + KL+HP +V+
Sbjct: 29 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLY 88
Query: 316 GVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV-PPQRLYNWARQIAAGMNYLHSKQIIHRD 374
GVC + C+V E+ +G L + L+ + + L + GM YL +IHRD
Sbjct: 89 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRD 148
Query: 375 LKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKID 430
L + N L+G + K+SDFG R + ST F V W +PEV + S K D
Sbjct: 149 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP--VKWASPEVFSFSRYSSKSD 206
Query: 431 IWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAP 489
+WS+G+++WE+ + + PY++ +S ++ + S+ L P +M CW P
Sbjct: 207 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDI-STGFRLYKPRLASTHVYQIMNHCWKERP 265
Query: 490 SSRPSFKQILSHL 502
RP+F ++L L
Sbjct: 266 EDRPAFSRLLRQL 278
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Query: 178 LIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
L+G + K+SDFG R + ST F V W +PEV + S K D+W
Sbjct: 155 LVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP--VKWASPEVFSFSRYSSKSDVW 208
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 137/297 (46%), Gaps = 45/297 (15%)
Query: 251 VLRD-EWEIPFESISDLQWLGSGAQGAV-------FSGKLRSEIVAVKKVREQKE----- 297
+L D +WE P +++ + LG G G V G+ VAVK ++E
Sbjct: 12 ILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELR 71
Query: 298 ---TDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRL--- 351
++ L+++NHP+++K G C+Q +++EY YG L L++ +V P L
Sbjct: 72 DLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSG 131
Query: 352 ---------------------YNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKI 390
++A QI+ GM YL +++HRDL + N+L+ + KI
Sbjct: 132 GSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKI 191
Query: 391 SDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ET 446
SDFG R+ + + + + V WMA E + + + + D+WS+G++LWE++T
Sbjct: 192 SDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGN 251
Query: 447 PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
PY + ++ + + + P C + LM CW P RP F I L+
Sbjct: 252 PYPGIPPER-LFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLE 307
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 132/290 (45%), Gaps = 30/290 (10%)
Query: 248 KSFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-------VAVKKV----REQK 296
K+ + D E+P ++I+ ++ LG GA G V+ G++ VAVK + EQ
Sbjct: 44 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 103
Query: 297 ETDIRH----LRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQ--- 349
E D + K NH NIV+ GV Q+ I++E A G L + L++ P Q
Sbjct: 104 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 163
Query: 350 ----RLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLI---GSKEEAKISDFGTCREWNNK 402
L + AR IA G YL IHRD+ + N L+ G AKI DFG R+
Sbjct: 164 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 223
Query: 403 STKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAIIW 458
S V WM PE + K D WS+G++LWE+ + PY + ++
Sbjct: 224 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 283
Query: 459 GVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
V S P P CP +M CW + P RP+F IL ++ +Q+
Sbjct: 284 FVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 332
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 132/290 (45%), Gaps = 30/290 (10%)
Query: 248 KSFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-------VAVKKV----REQK 296
K+ + D E+P ++I+ ++ LG GA G V+ G++ VAVK + EQ
Sbjct: 34 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 93
Query: 297 ETDIRH----LRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQ--- 349
E D + K NH NIV+ GV Q+ I++E A G L + L++ P Q
Sbjct: 94 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 153
Query: 350 ----RLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLI---GSKEEAKISDFGTCREWNNK 402
L + AR IA G YL IHRD+ + N L+ G AKI DFG R+
Sbjct: 154 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 213
Query: 403 STKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAIIW 458
S V WM PE + K D WS+G++LWE+ + PY + ++
Sbjct: 214 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 273
Query: 459 GVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
V S P P CP +M CW + P RP+F IL ++ +Q+
Sbjct: 274 FVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 322
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 137/297 (46%), Gaps = 45/297 (15%)
Query: 251 VLRD-EWEIPFESISDLQWLGSGAQGAV-------FSGKLRSEIVAVKKVREQKE----- 297
+L D +WE P +++ + LG G G V G+ VAVK ++E
Sbjct: 12 ILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELR 71
Query: 298 ---TDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRL--- 351
++ L+++NHP+++K G C+Q +++EY YG L L++ +V P L
Sbjct: 72 DLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSG 131
Query: 352 ---------------------YNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKI 390
++A QI+ GM YL +++HRDL + N+L+ + KI
Sbjct: 132 GSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKI 191
Query: 391 SDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ET 446
SDFG R+ + + + + V WMA E + + + + D+WS+G++LWE++T
Sbjct: 192 SDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGN 251
Query: 447 PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
PY + ++ + + + P C + LM CW P RP F I L+
Sbjct: 252 PYPGIPPER-LFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLE 307
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 130/253 (51%), Gaps = 21/253 (8%)
Query: 266 LQWLGSGAQGAVFSGKLRSE------IVAVKKVREQKETDIRH--------LRKLNHPNI 311
++ LGSGA G V+ G E VA+K++RE + +++P++
Sbjct: 22 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 81
Query: 312 VKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE-VPPQRLYNWARQIAAGMNYLHSKQI 370
+ G+C + ++M+ +G L + +++ ++ + Q L NW QIA GMNYL +++
Sbjct: 82 CRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 140
Query: 371 IHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSD 427
+HRDL + NVL+ + + KI+DFG + + + G + WMA E I + +
Sbjct: 141 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 200
Query: 428 KIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWS 486
+ D+WSYG+ +WEL+T + PY + +S I + LP P C ++M CW
Sbjct: 201 QSDVWSYGVTVWELMTFGSKPYDGIPASE-ISSILEKGERLPQPPICTIDVYMIMVKCWM 259
Query: 487 NAPSSRPSFKQIL 499
SRP F++++
Sbjct: 260 IDADSRPKFRELI 272
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 130/253 (51%), Gaps = 21/253 (8%)
Query: 266 LQWLGSGAQGAVFSGKLRSE------IVAVKKVREQKETDIRH--------LRKLNHPNI 311
++ LGSGA G V+ G E VA+K++RE + +++P++
Sbjct: 21 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 80
Query: 312 VKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE-VPPQRLYNWARQIAAGMNYLHSKQI 370
+ G+C + ++M+ +G L + +++ ++ + Q L NW QIA GMNYL +++
Sbjct: 81 CRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 139
Query: 371 IHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSD 427
+HRDL + NVL+ + + KI+DFG + + + G + WMA E I + +
Sbjct: 140 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 199
Query: 428 KIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWS 486
+ D+WSYG+ +WEL+T + PY + +S I + LP P C ++M CW
Sbjct: 200 QSDVWSYGVTVWELMTFGSKPYDGIPASE-ISSILEKGERLPQPPICTIDVYMIMVKCWM 258
Query: 487 NAPSSRPSFKQIL 499
SRP F++++
Sbjct: 259 IDADSRPKFRELI 271
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 132/290 (45%), Gaps = 30/290 (10%)
Query: 248 KSFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-------VAVKKV----REQK 296
K+ + D E+P ++I+ ++ LG GA G V+ G++ VAVK + EQ
Sbjct: 24 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 83
Query: 297 ETDIRH----LRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQ--- 349
E D + K NH NIV+ GV Q+ I++E A G L + L++ P Q
Sbjct: 84 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 143
Query: 350 ----RLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLI---GSKEEAKISDFGTCREWNNK 402
L + AR IA G YL IHRD+ + N L+ G AKI DFG R+
Sbjct: 144 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 203
Query: 403 STKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAIIW 458
S V WM PE + K D WS+G++LWE+ + PY + ++
Sbjct: 204 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 263
Query: 459 GVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
V S P P CP +M CW + P RP+F IL ++ +Q+
Sbjct: 264 FVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 312
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 130/253 (51%), Gaps = 21/253 (8%)
Query: 266 LQWLGSGAQGAVFSGKLRSE------IVAVKKVREQKETDIRH--------LRKLNHPNI 311
++ LGSGA G V+ G E VA+K++RE + +++P++
Sbjct: 23 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 82
Query: 312 VKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE-VPPQRLYNWARQIAAGMNYLHSKQI 370
+ G+C + ++M+ +G L + +++ ++ + Q L NW QIA GMNYL +++
Sbjct: 83 CRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 141
Query: 371 IHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSD 427
+HRDL + NVL+ + + KI+DFG + + + G + WMA E I + +
Sbjct: 142 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 201
Query: 428 KIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWS 486
+ D+WSYG+ +WEL+T + PY + +S I + LP P C ++M CW
Sbjct: 202 QSDVWSYGVTVWELMTFGSKPYDGIPASE-ISSILEKGERLPQPPICTIDVYMIMVKCWM 260
Query: 487 NAPSSRPSFKQIL 499
SRP F++++
Sbjct: 261 IDADSRPKFRELI 273
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 130/253 (51%), Gaps = 21/253 (8%)
Query: 266 LQWLGSGAQGAVFSGKLRSE------IVAVKKVREQKETDIRH--------LRKLNHPNI 311
++ LGSGA G V+ G E VA+K++RE + +++P++
Sbjct: 24 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 83
Query: 312 VKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE-VPPQRLYNWARQIAAGMNYLHSKQI 370
+ G+C + ++M+ +G L + +++ ++ + Q L NW QIA GMNYL +++
Sbjct: 84 CRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 142
Query: 371 IHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSD 427
+HRDL + NVL+ + + KI+DFG + + + G + WMA E I + +
Sbjct: 143 VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 202
Query: 428 KIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWS 486
+ D+WSYG+ +WEL+T + PY + +S I + LP P C ++M CW
Sbjct: 203 QSDVWSYGVTVWELMTFGSKPYDGIPASE-ISSILEKGERLPQPPICTIDVYMIMVKCWM 261
Query: 487 NAPSSRPSFKQIL 499
SRP F++++
Sbjct: 262 IDADSRPKFRELI 274
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 136/297 (45%), Gaps = 45/297 (15%)
Query: 251 VLRD-EWEIPFESISDLQWLGSGAQGAV-------FSGKLRSEIVAVKKVREQKE----- 297
+L D +WE P +++ + LG G G V G+ VAVK ++E
Sbjct: 12 ILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELR 71
Query: 298 ---TDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRL--- 351
++ L+++NHP+++K G C+Q +++EY YG L L++ +V P L
Sbjct: 72 DLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSG 131
Query: 352 ---------------------YNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKI 390
++A QI+ GM YL ++HRDL + N+L+ + KI
Sbjct: 132 GSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKI 191
Query: 391 SDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ET 446
SDFG R+ + + + + V WMA E + + + + D+WS+G++LWE++T
Sbjct: 192 SDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGN 251
Query: 447 PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
PY + ++ + + + P C + LM CW P RP F I L+
Sbjct: 252 PYPGIPPER-LFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLE 307
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 132/290 (45%), Gaps = 30/290 (10%)
Query: 248 KSFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-------VAVKKV----REQK 296
K+ + D E+P ++I+ ++ LG GA G V+ G++ VAVK + EQ
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 77
Query: 297 ETDIRH----LRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQ--- 349
E D + K NH NIV+ GV Q+ I++E A G L + L++ P Q
Sbjct: 78 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 137
Query: 350 ----RLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLI---GSKEEAKISDFGTCREWNNK 402
L + AR IA G YL IHRD+ + N L+ G AKI DFG R+
Sbjct: 138 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 197
Query: 403 STKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAIIW 458
S V WM PE + K D WS+G++LWE+ + PY + ++
Sbjct: 198 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 257
Query: 459 GVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
V S P P CP +M CW + P RP+F IL ++ +Q+
Sbjct: 258 FVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 306
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 130/253 (51%), Gaps = 21/253 (8%)
Query: 266 LQWLGSGAQGAVFSGKLRSE------IVAVKKVREQKETDIRH--------LRKLNHPNI 311
++ LGSGA G V+ G E VA+K++RE + +++P++
Sbjct: 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 79
Query: 312 VKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE-VPPQRLYNWARQIAAGMNYLHSKQI 370
+ G+C + ++M+ +G L + +++ ++ + Q L NW QIA GMNYL +++
Sbjct: 80 CRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 138
Query: 371 IHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSD 427
+HRDL + NVL+ + + KI+DFG + + + G + WMA E I + +
Sbjct: 139 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 198
Query: 428 KIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWS 486
+ D+WSYG+ +WEL+T + PY + +S I + LP P C ++M CW
Sbjct: 199 QSDVWSYGVTVWELMTFGSKPYDGIPASE-ISSILEKGERLPQPPICTIDVYMIMVKCWM 257
Query: 487 NAPSSRPSFKQIL 499
SRP F++++
Sbjct: 258 IDADSRPKFRELI 270
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 130/253 (51%), Gaps = 21/253 (8%)
Query: 266 LQWLGSGAQGAVFSGKLRSE------IVAVKKVREQKETDIRH--------LRKLNHPNI 311
++ LGSGA G V+ G E VA+K++RE + +++P++
Sbjct: 24 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 83
Query: 312 VKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE-VPPQRLYNWARQIAAGMNYLHSKQI 370
+ G+C + ++M+ +G L + +++ ++ + Q L NW QIA GMNYL +++
Sbjct: 84 CRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 142
Query: 371 IHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSD 427
+HRDL + NVL+ + + KI+DFG + + + G + WMA E I + +
Sbjct: 143 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 202
Query: 428 KIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWS 486
+ D+WSYG+ +WEL+T + PY + +S I + LP P C ++M CW
Sbjct: 203 QSDVWSYGVTVWELMTFGSKPYDGIPASE-ISSILEKGERLPQPPICTIDVYMIMVKCWM 261
Query: 487 NAPSSRPSFKQIL 499
SRP F++++
Sbjct: 262 IDADSRPKFRELI 274
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 130/281 (46%), Gaps = 13/281 (4%)
Query: 232 NRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEIVAVKK 291
RL P + + F R W + + + LQ +G G G V G R VAVK
Sbjct: 165 TRLIKPKVMEGTVAAQDEF-YRSGWALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKC 223
Query: 292 VREQKET-----DIRHLRKLNHPNIVKFKGVCTQ-APCYCIVMEYCAYGPLYNLLKD-GE 344
++ + + +L H N+V+ GV + IV EY A G L + L+ G
Sbjct: 224 IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR 283
Query: 345 EV-PPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKS 403
V L ++ + M YL +HRDL + NVL+ AK+SDFG +E + S
Sbjct: 284 SVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS--S 341
Query: 404 TKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGS 462
T+ + V W APE +R ++ S K D+WS+GI+LWE+ + PY + ++ V
Sbjct: 342 TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-E 400
Query: 463 SSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
+ P CP +MK CW ++RP+F Q+ L+
Sbjct: 401 KGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLE 441
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ AK+SDFG +E + ST+ + V W APE +R ++ S K D+W
Sbjct: 320 VLVSEDNVAKVSDFGLTKEAS--STQDTGKLPVKWTAPEALREKKFSTKSDVW 370
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 130/277 (46%), Gaps = 36/277 (12%)
Query: 257 EIPFESISDLQWLGSGAQGAVFSGKLRSEIV----AVKKVREQKETD--------IRHLR 304
+I F+ + +G G G V +++ + + A+K+++E D + L
Sbjct: 23 DIKFQDV-----IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLC 77
Query: 305 KL-NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGE--EVPP------------- 348
KL +HPNI+ G C + +EY +G L + L+ E P
Sbjct: 78 KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 137
Query: 349 -QRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMS 407
Q+L ++A +A GM+YL KQ IHR+L + N+L+G AKI+DFG R K
Sbjct: 138 SQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTM 197
Query: 408 FAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDVDSSAIIWGVGSSSLH 466
V WMA E + + D+WSYG++LWE+++ TPY + + A ++
Sbjct: 198 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM-TCAELYEKLPQGYR 256
Query: 467 LPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
L P C D LM+ CW P RPSF QIL L+
Sbjct: 257 LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLN 293
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 23/53 (43%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+G AKI+DFG R K V WMA E + + D+W
Sbjct: 170 ILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVW 222
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 129/258 (50%), Gaps = 13/258 (5%)
Query: 263 ISDLQWLGSGAQGAVFSGKLRSEI-VAVKKVREQKETD------IRHLRKLNHPNIVKFK 315
++ L+ LG+G G V GK R + VA+K ++E ++ + + L+H +V+
Sbjct: 6 LTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLY 65
Query: 316 GVCTQAPCYCIVMEYCAYGPLYNLLKD-GEEVPPQRLYNWARQIAAGMNYLHSKQIIHRD 374
GVCT+ I+ EY A G L N L++ Q+L + + M YL SKQ +HRD
Sbjct: 66 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRD 125
Query: 375 LKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT--VAWMAPEVIRNEQCSDKIDIW 432
L + N L+ + K+SDFG R + S V W PEV+ + S K DIW
Sbjct: 126 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 185
Query: 433 SYGIVLWELLTC-ETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSS 491
++G+++WE+ + + PY+ +S + + L L P + +M CW
Sbjct: 186 AFGVLMWEIYSLGKMPYERFTNSETAEHI-AQGLRLYRPHLASEKVYTIMYSCWHEKADE 244
Query: 492 RPSFKQILSH-LDIASQE 508
RP+FK +LS+ LD+ +E
Sbjct: 245 RPTFKILLSNILDVMDEE 262
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 178 LIGSKEEAKISDFGTCREWNNKSTKMSFAGT--VAWMAPEVIRNEQCSDKIDIW 229
L+ + K+SDFG R + S V W PEV+ + S K DIW
Sbjct: 132 LVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 185
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 132/290 (45%), Gaps = 30/290 (10%)
Query: 248 KSFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-------VAVKKV----REQK 296
K+ + D E+P ++I+ ++ LG GA G V+ G++ VAVK + EQ
Sbjct: 32 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQD 91
Query: 297 ETDIRH----LRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQ--- 349
E D + K NH NIV+ GV Q+ I++E A G L + L++ P Q
Sbjct: 92 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 151
Query: 350 ----RLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLI---GSKEEAKISDFGTCREWNNK 402
L + AR IA G YL IHRD+ + N L+ G AKI DFG R+
Sbjct: 152 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 211
Query: 403 STKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAIIW 458
S V WM PE + K D WS+G++LWE+ + PY + ++
Sbjct: 212 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 271
Query: 459 GVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
V S P P CP +M CW + P RP+F IL ++ +Q+
Sbjct: 272 FVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 320
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 130/253 (51%), Gaps = 21/253 (8%)
Query: 266 LQWLGSGAQGAVFSGKLRSE------IVAVKKVREQKETDIRH--------LRKLNHPNI 311
++ LGSGA G V+ G E VA+K++RE + +++P++
Sbjct: 22 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 81
Query: 312 VKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE-VPPQRLYNWARQIAAGMNYLHSKQI 370
+ G+C + ++M+ +G L + +++ ++ + Q L NW QIA GMNYL +++
Sbjct: 82 CRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 140
Query: 371 IHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSD 427
+HRDL + NVL+ + + KI+DFG + + + G + WMA E I + +
Sbjct: 141 VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 200
Query: 428 KIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWS 486
+ D+WSYG+ +WEL+T + PY + +S I + LP P C ++M CW
Sbjct: 201 QSDVWSYGVTVWELMTFGSKPYDGIPASE-ISSILEKGERLPQPPICTIDVYMIMVKCWM 259
Query: 487 NAPSSRPSFKQIL 499
SRP F++++
Sbjct: 260 IDADSRPKFRELI 272
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 141/289 (48%), Gaps = 31/289 (10%)
Query: 259 PFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKV--------REQKETDIRHLRKLNH 308
P E + L+ +G G+ G VF G ++VA+K + E + +I L + +
Sbjct: 5 PEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS 64
Query: 309 PNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK 368
P + K+ G + I+MEY G +LL+ G + ++ R+I G++YLHS+
Sbjct: 65 PYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-LDETQIATILREILKGLDYLHSE 123
Query: 369 QIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKM-SFAGTVAWMAPEVIRNEQCSD 427
+ IHRD+K+ NVL+ E K++DFG + + K +F GT WMAPEVI+
Sbjct: 124 KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDS 183
Query: 428 KIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMK----M 483
K DIWS GI EL E P+ ++ +++ + ++ P T + +K
Sbjct: 184 KADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN-----PPTLEGNYSKPLKEFVEA 238
Query: 484 CWSNAPSSRPSFKQILSHLDIASQEVLRIQPEPYYKMQMI-----WKEE 527
C + PS RP+ K++L H + +LR + Y ++I WK E
Sbjct: 239 CLNKEPSFRPTAKELLKH-----KFILRNAKKTSYLTELIDRYKRWKAE 282
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKM-SFAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ E K++DFG + + K +F GT WMAPEVI+ K DIW
Sbjct: 135 VLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIW 188
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 123/260 (47%), Gaps = 12/260 (4%)
Query: 253 RDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEIVAVKKVREQKET-----DIRHLRKLN 307
R W + + + LQ +G G G V G R VAVK ++ + + +L
Sbjct: 13 RSGWALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLR 72
Query: 308 HPNIVKFKGVCTQ-APCYCIVMEYCAYGPLYNLLKD-GEEVPPQR-LYNWARQIAAGMNY 364
H N+V+ GV + IV EY A G L + L+ G V L ++ + M Y
Sbjct: 73 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 132
Query: 365 LHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQ 424
L +HRDL + NVL+ AK+SDFG +E + ST+ + V W APE +R ++
Sbjct: 133 LEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS--STQDTGKLPVKWTAPEALREKK 190
Query: 425 CSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKM 483
S K D+WS+GI+LWE+ + PY + ++ V + P CP +MK
Sbjct: 191 FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-EKGYKMDAPDGCPPAVYEVMKN 249
Query: 484 CWSNAPSSRPSFKQILSHLD 503
CW + RPSF Q+ L+
Sbjct: 250 CWHLDAAMRPSFLQLREQLE 269
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ AK+SDFG +E + ST+ + V W APE +R ++ S K D+W
Sbjct: 148 VLVSEDNVAKVSDFGLTKEAS--STQDTGKLPVKWTAPEALREKKFSTKSDVW 198
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 132/290 (45%), Gaps = 30/290 (10%)
Query: 248 KSFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-------VAVKKV----REQK 296
K+ + D E+P ++I+ ++ LG GA G V+ G++ VAVK + EQ
Sbjct: 17 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 76
Query: 297 ETDIRH----LRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQ--- 349
E D + K NH NIV+ GV Q+ I++E A G L + L++ P Q
Sbjct: 77 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 136
Query: 350 ----RLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLI---GSKEEAKISDFGTCREWNNK 402
L + AR IA G YL IHRD+ + N L+ G AKI DFG R+
Sbjct: 137 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 196
Query: 403 STKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAIIW 458
S V WM PE + K D WS+G++LWE+ + PY + ++
Sbjct: 197 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 256
Query: 459 GVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
V S P P CP +M CW + P RP+F IL ++ +Q+
Sbjct: 257 FVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 130/253 (51%), Gaps = 21/253 (8%)
Query: 266 LQWLGSGAQGAVFSGKLRSE------IVAVKKVREQKETDIRH--------LRKLNHPNI 311
++ LGSGA G V+ G E VA+K++RE + +++P++
Sbjct: 30 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 89
Query: 312 VKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE-VPPQRLYNWARQIAAGMNYLHSKQI 370
+ G+C + ++ + +G L + +++ ++ + Q L NW QIA GMNYL +++
Sbjct: 90 CRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 148
Query: 371 IHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSD 427
+HRDL + NVL+ + + KI+DFG + + + G + WMA E I + +
Sbjct: 149 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 208
Query: 428 KIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWS 486
+ D+WSYG+ +WEL+T + PY + +S I + LP P C ++M+ CW
Sbjct: 209 QSDVWSYGVTVWELMTFGSKPYDGIPASE-ISSILEKGERLPQPPICTIDVYMIMRKCWM 267
Query: 487 NAPSSRPSFKQIL 499
SRP F++++
Sbjct: 268 IDADSRPKFRELI 280
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 132/290 (45%), Gaps = 30/290 (10%)
Query: 248 KSFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-------VAVKKV----REQK 296
K+ + D E+P ++I+ ++ LG GA G V+ G++ VAVK + EQ
Sbjct: 9 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 68
Query: 297 ETDIRH----LRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQ--- 349
E D + K NH NIV+ GV Q+ I++E A G L + L++ P Q
Sbjct: 69 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 128
Query: 350 ----RLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLI---GSKEEAKISDFGTCREWNNK 402
L + AR IA G YL IHRD+ + N L+ G AKI DFG R+
Sbjct: 129 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 188
Query: 403 STKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAIIW 458
S V WM PE + K D WS+G++LWE+ + PY + ++
Sbjct: 189 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 248
Query: 459 GVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
V S P P CP +M CW + P RP+F IL ++ +Q+
Sbjct: 249 FVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 297
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 129/258 (50%), Gaps = 21/258 (8%)
Query: 259 PFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKV--------REQKETDIRHLRKLNH 308
P E + L+ +G G+ G VF G ++VA+K + E + +I L + +
Sbjct: 25 PEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS 84
Query: 309 PNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK 368
P + K+ G + I+MEY G +LL+ G + ++ R+I G++YLHS+
Sbjct: 85 PYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-LDETQIATILREILKGLDYLHSE 143
Query: 369 QIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKM-SFAGTVAWMAPEVIRNEQCSD 427
+ IHRD+K+ NVL+ E K++DFG + + K +F GT WMAPEVI+
Sbjct: 144 KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDS 203
Query: 428 KIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMK----M 483
K DIWS GI EL E P+ ++ +++ + ++ P T + +K
Sbjct: 204 KADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN-----PPTLEGNYSKPLKEFVEA 258
Query: 484 CWSNAPSSRPSFKQILSH 501
C + PS RP+ K++L H
Sbjct: 259 CLNKEPSFRPTAKELLKH 276
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKM-SFAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ E K++DFG + + K +F GT WMAPEVI+ K DIW
Sbjct: 155 VLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIW 208
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 141/289 (48%), Gaps = 31/289 (10%)
Query: 259 PFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKV--------REQKETDIRHLRKLNH 308
P E + L+ +G G+ G VF G ++VA+K + E + +I L + +
Sbjct: 20 PEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS 79
Query: 309 PNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK 368
P + K+ G + I+MEY G +LL+ G + ++ R+I G++YLHS+
Sbjct: 80 PYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-LDETQIATILREILKGLDYLHSE 138
Query: 369 QIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMS-FAGTVAWMAPEVIRNEQCSD 427
+ IHRD+K+ NVL+ E K++DFG + + K + F GT WMAPEVI+
Sbjct: 139 KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDS 198
Query: 428 KIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMK----M 483
K DIWS GI EL E P+ ++ +++ + ++ P T + +K
Sbjct: 199 KADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN-----PPTLEGNYSKPLKEFVEA 253
Query: 484 CWSNAPSSRPSFKQILSHLDIASQEVLRIQPEPYYKMQMI-----WKEE 527
C + PS RP+ K++L H + +LR + Y ++I WK E
Sbjct: 254 CLNKEPSFRPTAKELLKH-----KFILRNAKKTSYLTELIDRYKRWKAE 297
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMS-FAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ E K++DFG + + K + F GT WMAPEVI+ K DIW
Sbjct: 150 VLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIW 203
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 130/253 (51%), Gaps = 21/253 (8%)
Query: 266 LQWLGSGAQGAVFSGKLRSE------IVAVKKVREQKETDIRH--------LRKLNHPNI 311
++ LGSGA G V+ G E VA+K++RE + +++P++
Sbjct: 23 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 82
Query: 312 VKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE-VPPQRLYNWARQIAAGMNYLHSKQI 370
+ G+C + ++ + +G L + +++ ++ + Q L NW QIA GMNYL +++
Sbjct: 83 CRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 141
Query: 371 IHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSD 427
+HRDL + NVL+ + + KI+DFG + + + G + WMA E I + +
Sbjct: 142 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 201
Query: 428 KIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWS 486
+ D+WSYG+ +WEL+T + PY + +S I + LP P C ++M+ CW
Sbjct: 202 QSDVWSYGVTVWELMTFGSKPYDGIPASE-ISSILEKGERLPQPPICTIDVYMIMRKCWM 260
Query: 487 NAPSSRPSFKQIL 499
SRP F++++
Sbjct: 261 IDADSRPKFRELI 273
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 141/289 (48%), Gaps = 31/289 (10%)
Query: 259 PFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKV--------REQKETDIRHLRKLNH 308
P E + L+ +G G+ G VF G ++VA+K + E + +I L + +
Sbjct: 5 PEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS 64
Query: 309 PNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK 368
P + K+ G + I+MEY G +LL+ G + ++ R+I G++YLHS+
Sbjct: 65 PYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-LDETQIATILREILKGLDYLHSE 123
Query: 369 QIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMS-FAGTVAWMAPEVIRNEQCSD 427
+ IHRD+K+ NVL+ E K++DFG + + K + F GT WMAPEVI+
Sbjct: 124 KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDS 183
Query: 428 KIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMK----M 483
K DIWS GI EL E P+ ++ +++ + ++ P T + +K
Sbjct: 184 KADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN-----PPTLEGNYSKPLKEFVEA 238
Query: 484 CWSNAPSSRPSFKQILSHLDIASQEVLRIQPEPYYKMQMI-----WKEE 527
C + PS RP+ K++L H + +LR + Y ++I WK E
Sbjct: 239 CLNKEPSFRPTAKELLKH-----KFILRNAKKTSYLTELIDRYKRWKAE 282
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMS-FAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ E K++DFG + + K + F GT WMAPEVI+ K DIW
Sbjct: 135 VLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIW 188
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 130/253 (51%), Gaps = 21/253 (8%)
Query: 266 LQWLGSGAQGAVFSGKLRSE------IVAVKKVREQKETDIRH--------LRKLNHPNI 311
++ LGSGA G V+ G E VA+K++RE + +++P++
Sbjct: 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 79
Query: 312 VKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE-VPPQRLYNWARQIAAGMNYLHSKQI 370
+ G+C + ++ + +G L + +++ ++ + Q L NW QIA GMNYL +++
Sbjct: 80 CRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 138
Query: 371 IHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSD 427
+HRDL + NVL+ + + KI+DFG + + + G + WMA E I + +
Sbjct: 139 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 198
Query: 428 KIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWS 486
+ D+WSYG+ +WEL+T + PY + +S I + LP P C ++M+ CW
Sbjct: 199 QSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLPQPPICTIDVYMIMRKCWM 257
Query: 487 NAPSSRPSFKQIL 499
SRP F++++
Sbjct: 258 IDADSRPKFRELI 270
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 130/253 (51%), Gaps = 21/253 (8%)
Query: 266 LQWLGSGAQGAVFSGKLRSE------IVAVKKVREQKETDIRH--------LRKLNHPNI 311
++ LGSGA G V+ G E VA+K++RE + +++P++
Sbjct: 22 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 81
Query: 312 VKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE-VPPQRLYNWARQIAAGMNYLHSKQI 370
+ G+C + ++ + +G L + +++ ++ + Q L NW QIA GMNYL +++
Sbjct: 82 CRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 140
Query: 371 IHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSD 427
+HRDL + NVL+ + + KI+DFG + + + G + WMA E I + +
Sbjct: 141 VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 200
Query: 428 KIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWS 486
+ D+WSYG+ +WEL+T + PY + +S I + LP P C ++M+ CW
Sbjct: 201 QSDVWSYGVTVWELMTFGSKPYDGIPASE-ISSILEKGERLPQPPICTIDVYMIMRKCWM 259
Query: 487 NAPSSRPSFKQIL 499
SRP F++++
Sbjct: 260 IDADSRPKFRELI 272
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 135/278 (48%), Gaps = 32/278 (11%)
Query: 269 LGSGAQGAVFSGKLRSE------IVAVKKVREQK--ETDIRHLRK------LNHPNIVKF 314
LGSGA G V+ G E VA+K + E + ++ + + ++HP++V+
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 315 KGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE-VPPQRLYNWARQIAAGMNYLHSKQIIHR 373
GVC +P +V + +G L + + ++ + Q L NW QIA GM YL ++++HR
Sbjct: 83 LGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHR 141
Query: 374 DLKSPNVLIGSKEEAKISDFGTCR-------EWNNKSTKMSFAGTVAWMAPEVIRNEQCS 426
DL + NVL+ S KI+DFG R E+N KM + WMA E I + +
Sbjct: 142 DLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMP----IKWMALECIHYRKFT 197
Query: 427 DKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCW 485
+ D+WSYG+ +WEL+T PY + + I + LP P C ++M CW
Sbjct: 198 HQSDVWSYGVTIWELMTFGGKPYDGIPTREIP-DLLEKGERLPQPPICTIDVYMVMVKCW 256
Query: 486 SNAPSSRPSFKQI---LSHLDIASQEVLRIQPEPYYKM 520
SRP FK++ S + Q L IQ + K+
Sbjct: 257 MIDADSRPKFKELAAEFSRMARDPQRYLVIQGDDRMKL 294
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 39/97 (40%), Gaps = 20/97 (20%)
Query: 177 VLIGSKEEAKISDFGTCR-------EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ S KI+DFG R E+N KM + WMA E I + + + D+W
Sbjct: 148 VLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMP----IKWMALECIHYRKFTHQSDVW 203
Query: 230 YKNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDL 266
S I E +F + IP I DL
Sbjct: 204 ---------SYGVTIWELMTFGGKPYDGIPTREIPDL 231
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 129/270 (47%), Gaps = 43/270 (15%)
Query: 269 LGSGAQGAVF------SGKLRSEIVAVKKVREQK--------ETDIRHLRKLNHPNIVKF 314
LG G G V G E VAVK ++ + + +I LR L H NIVK+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 315 KGVCTQAPCYCI--VMEYCAYGPLYNLL-KDGEEVPPQRLYNWARQIAAGMNYLHSKQII 371
KG+CT+ I +ME+ G L L K+ ++ ++ +A QI GM+YL S+Q +
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYV 136
Query: 372 HRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSD 427
HRDL + NVL+ S+ + KI DFG + + + K V W APE + +
Sbjct: 137 HRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYI 196
Query: 428 KIDIWSYGIVLWELLTCETPYKDVDSSAI---IWGVGSS---------------SLHLPI 469
D+WS+G+ L ELLT Y D DSS + + +G + LP
Sbjct: 197 ASDVWSFGVTLHELLT----YCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPC 252
Query: 470 PSTCPDGFQLLMKMCWSNAPSSRPSFKQIL 499
P CPD LM+ CW PS+R SF+ ++
Sbjct: 253 PPNCPDEVYQLMRKCWEFQPSNRTSFQNLI 282
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 128/253 (50%), Gaps = 21/253 (8%)
Query: 266 LQWLGSGAQGAVFSGKLRSE------IVAVKKVREQKETDIRH--------LRKLNHPNI 311
++ LGSGA G V+ G E VA+K++RE + +++P++
Sbjct: 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 79
Query: 312 VKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE-VPPQRLYNWARQIAAGMNYLHSKQI 370
+ G+C + I + +G L + +++ ++ + Q L NW QIA GMNYL +++
Sbjct: 80 CRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 138
Query: 371 IHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSD 427
+HRDL + NVL+ + + KI+DFG + + + G + WMA E I + +
Sbjct: 139 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 198
Query: 428 KIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWS 486
+ D+WSYG+ +WEL+T + PY + +S I + LP P C ++M CW
Sbjct: 199 QSDVWSYGVTVWELMTFGSKPYDGIPASE-ISSILEKGERLPQPPICTIDVYMIMVKCWM 257
Query: 487 NAPSSRPSFKQIL 499
SRP F++++
Sbjct: 258 IDADSRPKFRELI 270
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 129/260 (49%), Gaps = 25/260 (9%)
Query: 259 PFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKV--------REQKETDIRHLRKLNH 308
P E + L +G G+ G V+ G E+VA+K + E + +I L + +
Sbjct: 17 PEELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS 76
Query: 309 PNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLY--NWARQIAAGMNYLH 366
P I ++ G ++ I+MEY G +LLK G P + Y R+I G++YLH
Sbjct: 77 PYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPG---PLEETYIATILREILKGLDYLH 133
Query: 367 SKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMS-FAGTVAWMAPEVIRNEQC 425
S++ IHRD+K+ NVL+ + + K++DFG + + K + F GT WMAPEVI+
Sbjct: 134 SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAY 193
Query: 426 SDKIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTC----PDGFQLLM 481
K DIWS GI EL E P D+ +++ + +S P T F+ +
Sbjct: 194 DFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNS-----PPTLEGQHSKPFKEFV 248
Query: 482 KMCWSNAPSSRPSFKQILSH 501
+ C + P RP+ K++L H
Sbjct: 249 EACLNKDPRFRPTAKELLKH 268
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMS-FAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ + + K++DFG + + K + F GT WMAPEVI+ K DIW
Sbjct: 147 VLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIW 200
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 131/290 (45%), Gaps = 30/290 (10%)
Query: 248 KSFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-------VAVKKV----REQK 296
K+ + D E+P ++I+ ++ LG GA G V+ G++ VAVK + EQ
Sbjct: 58 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 117
Query: 297 ETDIRH----LRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQ--- 349
E D + K NH NIV+ GV Q+ I++E A G L + L++ P Q
Sbjct: 118 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 177
Query: 350 ----RLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLI---GSKEEAKISDFGTCREWNNK 402
L + AR IA G YL IHRD+ + N L+ G AKI DFG R+
Sbjct: 178 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 237
Query: 403 STKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAIIW 458
V WM PE + K D WS+G++LWE+ + PY + ++
Sbjct: 238 GYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 297
Query: 459 GVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
V S P P CP +M CW + P RP+F IL ++ +Q+
Sbjct: 298 FVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 129/270 (47%), Gaps = 43/270 (15%)
Query: 269 LGSGAQGAVF------SGKLRSEIVAVKKVREQK--------ETDIRHLRKLNHPNIVKF 314
LG G G V G E VAVK ++ + + +I LR L H NIVK+
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 315 KGVCTQAPCYCI--VMEYCAYGPLYNLL-KDGEEVPPQRLYNWARQIAAGMNYLHSKQII 371
KG+CT+ I +ME+ G L L K+ ++ ++ +A QI GM+YL S+Q +
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYV 148
Query: 372 HRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSD 427
HRDL + NVL+ S+ + KI DFG + + + K V W APE + +
Sbjct: 149 HRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYI 208
Query: 428 KIDIWSYGIVLWELLTCETPYKDVDSSAI---IWGVGSS---------------SLHLPI 469
D+WS+G+ L ELLT Y D DSS + + +G + LP
Sbjct: 209 ASDVWSFGVTLHELLT----YCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPC 264
Query: 470 PSTCPDGFQLLMKMCWSNAPSSRPSFKQIL 499
P CPD LM+ CW PS+R SF+ ++
Sbjct: 265 PPNCPDEVYQLMRKCWEFQPSNRTSFQNLI 294
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 131/290 (45%), Gaps = 30/290 (10%)
Query: 248 KSFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-------VAVKKV----REQK 296
K+ + D E+P ++I+ ++ LG GA G V+ G++ VAVK + EQ
Sbjct: 35 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 94
Query: 297 ETDIRH----LRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQ--- 349
E D + K NH NIV+ GV Q+ I++E A G L + L++ P Q
Sbjct: 95 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 154
Query: 350 ----RLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLI---GSKEEAKISDFGTCREWNNK 402
L + AR IA G YL IHRD+ + N L+ G AKI DFG R+
Sbjct: 155 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 214
Query: 403 STKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAIIW 458
V WM PE + K D WS+G++LWE+ + PY + ++
Sbjct: 215 GYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 274
Query: 459 GVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
V S P P CP +M CW + P RP+F IL ++ +Q+
Sbjct: 275 FVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 323
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 128/255 (50%), Gaps = 22/255 (8%)
Query: 269 LGSGAQGAVFSG--------KLRSEIVAVKKVREQKE-----TDIRHLRKLNHPNIVKFK 315
+G G G V+ G K+ + ++ ++ + E T+ ++ +HPN++
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 316 GVCTQAPCY-CIVMEYCAYGPLYNLLKDGEEVPPQR-LYNWARQIAAGMNYLHSKQIIHR 373
G+C ++ +V+ Y +G L N +++ P + L + Q+A GM YL SK+ +HR
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 156
Query: 374 DLKSPNVLIGSKEEAKISDFGTCREWNNKS-----TKMSFAGTVAWMAPEVIRNEQCSDK 428
DL + N ++ K K++DFG R+ +K K V WMA E ++ ++ + K
Sbjct: 157 DLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTK 216
Query: 429 IDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSN 487
D+WS+G++LWEL+T PY DV++ I + L P CPD +M CW
Sbjct: 217 SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR-RLLQPEYCPDPLYEVMLKCWHP 275
Query: 488 APSSRPSFKQILSHL 502
RPSF +++S +
Sbjct: 276 KAEMRPSFSELVSRI 290
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 178 LIGSKEEAKISDFGTCREWNNKS-----TKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
++ K K++DFG R+ +K K V WMA E ++ ++ + K D+W
Sbjct: 164 MLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVW 220
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 122/257 (47%), Gaps = 12/257 (4%)
Query: 256 WEIPFESISDLQWLGSGAQGAVFSGKLRSEIVAVKKVREQKET-----DIRHLRKLNHPN 310
W + + + LQ +G G G V G R VAVK ++ + + +L H N
Sbjct: 1 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSN 60
Query: 311 IVKFKGVCTQ-APCYCIVMEYCAYGPLYNLLKD-GEEVPPQR-LYNWARQIAAGMNYLHS 367
+V+ GV + IV EY A G L + L+ G V L ++ + M YL
Sbjct: 61 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 120
Query: 368 KQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSD 427
+HRDL + NVL+ AK+SDFG +E + ST+ + V W APE +R ++ S
Sbjct: 121 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS--STQDTGKLPVKWTAPEALREKKFST 178
Query: 428 KIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWS 486
K D+WS+GI+LWE+ + PY + ++ V + P CP +MK CW
Sbjct: 179 KSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-EKGYKMDAPDGCPPAVYEVMKNCWH 237
Query: 487 NAPSSRPSFKQILSHLD 503
+ RPSF Q+ L+
Sbjct: 238 LDAAMRPSFLQLREQLE 254
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ AK+SDFG +E + ST+ + V W APE +R ++ S K D+W
Sbjct: 133 VLVSEDNVAKVSDFGLTKEAS--STQDTGKLPVKWTAPEALREKKFSTKSDVW 183
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 132/290 (45%), Gaps = 30/290 (10%)
Query: 248 KSFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI-------VAVKKV----REQK 296
K+ + D E+P ++I+ ++ LG GA G V+ G++ VAVK + EQ
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 77
Query: 297 ETDIRH----LRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQ--- 349
E D + K NH NIV+ GV Q+ I++E A G L + L++ P Q
Sbjct: 78 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 137
Query: 350 ----RLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLI---GSKEEAKISDFGTCREWNNK 402
L + AR IA G YL IHRD+ + N L+ G AKI DFG ++
Sbjct: 138 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRA 197
Query: 403 STKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCE-TPYKDVDSSAIIW 458
S V WM PE + K D WS+G++LWE+ + PY + ++
Sbjct: 198 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 257
Query: 459 GVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLDIASQE 508
V S P P CP +M CW + P RP+F IL ++ +Q+
Sbjct: 258 FVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 306
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 128/255 (50%), Gaps = 22/255 (8%)
Query: 269 LGSGAQGAVFSG--------KLRSEIVAVKKVREQKE-----TDIRHLRKLNHPNIVKFK 315
+G G G V+ G K+ + ++ ++ + E T+ ++ +HPN++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 316 GVCTQAPCY-CIVMEYCAYGPLYNLLKDGEEVPPQR-LYNWARQIAAGMNYLHSKQIIHR 373
G+C ++ +V+ Y +G L N +++ P + L + Q+A GM YL SK+ +HR
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 157
Query: 374 DLKSPNVLIGSKEEAKISDFGTCREWNNKS-----TKMSFAGTVAWMAPEVIRNEQCSDK 428
DL + N ++ K K++DFG R+ +K K V WMA E ++ ++ + K
Sbjct: 158 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTK 217
Query: 429 IDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSN 487
D+WS+G++LWEL+T PY DV++ I + L P CPD +M CW
Sbjct: 218 SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR-RLLQPEYCPDPLYEVMLKCWHP 276
Query: 488 APSSRPSFKQILSHL 502
RPSF +++S +
Sbjct: 277 KAEMRPSFSELVSRI 291
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 178 LIGSKEEAKISDFGTCREWNNKS-----TKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
++ K K++DFG R+ +K K V WMA E ++ ++ + K D+W
Sbjct: 165 MLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVW 221
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 128/255 (50%), Gaps = 22/255 (8%)
Query: 269 LGSGAQGAVFSG--------KLRSEIVAVKKVREQKE-----TDIRHLRKLNHPNIVKFK 315
+G G G V+ G K+ + ++ ++ + E T+ ++ +HPN++
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 316 GVCTQAPCY-CIVMEYCAYGPLYNLLKDGEEVPPQR-LYNWARQIAAGMNYLHSKQIIHR 373
G+C ++ +V+ Y +G L N +++ P + L + Q+A GM YL SK+ +HR
Sbjct: 95 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 154
Query: 374 DLKSPNVLIGSKEEAKISDFGTCREWNNKS-----TKMSFAGTVAWMAPEVIRNEQCSDK 428
DL + N ++ K K++DFG R+ +K K V WMA E ++ ++ + K
Sbjct: 155 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTK 214
Query: 429 IDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSN 487
D+WS+G++LWEL+T PY DV++ I + L P CPD +M CW
Sbjct: 215 SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR-RLLQPEYCPDPLYEVMLKCWHP 273
Query: 488 APSSRPSFKQILSHL 502
RPSF +++S +
Sbjct: 274 KAEMRPSFSELVSRI 288
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 178 LIGSKEEAKISDFGTCREWNNKS-----TKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
++ K K++DFG R+ +K K V WMA E ++ ++ + K D+W
Sbjct: 162 MLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVW 218
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 128/255 (50%), Gaps = 22/255 (8%)
Query: 269 LGSGAQGAVFSG--------KLRSEIVAVKKVREQKE-----TDIRHLRKLNHPNIVKFK 315
+G G G V+ G K+ + ++ ++ + E T+ ++ +HPN++
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 316 GVCTQAPCY-CIVMEYCAYGPLYNLLKDGEEVPPQR-LYNWARQIAAGMNYLHSKQIIHR 373
G+C ++ +V+ Y +G L N +++ P + L + Q+A GM YL SK+ +HR
Sbjct: 93 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 152
Query: 374 DLKSPNVLIGSKEEAKISDFGTCREWNNKS-----TKMSFAGTVAWMAPEVIRNEQCSDK 428
DL + N ++ K K++DFG R+ +K K V WMA E ++ ++ + K
Sbjct: 153 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTK 212
Query: 429 IDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSN 487
D+WS+G++LWEL+T PY DV++ I + L P CPD +M CW
Sbjct: 213 SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR-RLLQPEYCPDPLYEVMLKCWHP 271
Query: 488 APSSRPSFKQILSHL 502
RPSF +++S +
Sbjct: 272 KAEMRPSFSELVSRI 286
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 178 LIGSKEEAKISDFGTCREWNNKS-----TKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
++ K K++DFG R+ +K K V WMA E ++ ++ + K D+W
Sbjct: 160 MLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVW 216
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 128/255 (50%), Gaps = 22/255 (8%)
Query: 269 LGSGAQGAVFSG--------KLRSEIVAVKKVREQKE-----TDIRHLRKLNHPNIVKFK 315
+G G G V+ G K+ + ++ ++ + E T+ ++ +HPN++
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 316 GVCTQAPCY-CIVMEYCAYGPLYNLLKDGEEVPPQR-LYNWARQIAAGMNYLHSKQIIHR 373
G+C ++ +V+ Y +G L N +++ P + L + Q+A GM YL SK+ +HR
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 156
Query: 374 DLKSPNVLIGSKEEAKISDFGTCREWNNKS-----TKMSFAGTVAWMAPEVIRNEQCSDK 428
DL + N ++ K K++DFG R+ +K K V WMA E ++ ++ + K
Sbjct: 157 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTK 216
Query: 429 IDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSN 487
D+WS+G++LWEL+T PY DV++ I + L P CPD +M CW
Sbjct: 217 SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR-RLLQPEYCPDPLYEVMLKCWHP 275
Query: 488 APSSRPSFKQILSHL 502
RPSF +++S +
Sbjct: 276 KAEMRPSFSELVSRI 290
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 178 LIGSKEEAKISDFGTCREWNNKS-----TKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
++ K K++DFG R+ +K K V WMA E ++ ++ + K D+W
Sbjct: 164 MLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVW 220
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 129/253 (50%), Gaps = 21/253 (8%)
Query: 266 LQWLGSGAQGAVFSGKLRSE------IVAVKKVREQKETDIRH--------LRKLNHPNI 311
++ LGSGA G V+ G E VA+K++RE + +++P++
Sbjct: 14 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 73
Query: 312 VKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE-VPPQRLYNWARQIAAGMNYLHSKQI 370
+ G+C + ++ + +G L + +++ ++ + Q L NW QIA GMNYL +++
Sbjct: 74 CRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 132
Query: 371 IHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSD 427
+HRDL + NVL+ + + KI+DFG + + + G + WMA E I + +
Sbjct: 133 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 192
Query: 428 KIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWS 486
+ D+WSYG+ +WEL+T + PY + +S I + LP P C ++M CW
Sbjct: 193 QSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLPQPPICTIDVYMIMVKCWM 251
Query: 487 NAPSSRPSFKQIL 499
SRP F++++
Sbjct: 252 IDADSRPKFRELI 264
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 128/255 (50%), Gaps = 22/255 (8%)
Query: 269 LGSGAQGAVFSG--------KLRSEIVAVKKVREQKE-----TDIRHLRKLNHPNIVKFK 315
+G G G V+ G K+ + ++ ++ + E T+ ++ +HPN++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 316 GVCTQAPCY-CIVMEYCAYGPLYNLLKDGEEVPPQR-LYNWARQIAAGMNYLHSKQIIHR 373
G+C ++ +V+ Y +G L N +++ P + L + Q+A GM YL SK+ +HR
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 157
Query: 374 DLKSPNVLIGSKEEAKISDFGTCREWNNKS-----TKMSFAGTVAWMAPEVIRNEQCSDK 428
DL + N ++ K K++DFG R+ +K K V WMA E ++ ++ + K
Sbjct: 158 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTK 217
Query: 429 IDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSN 487
D+WS+G++LWEL+T PY DV++ I + L P CPD +M CW
Sbjct: 218 SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR-RLLQPEYCPDPLYEVMLKCWHP 276
Query: 488 APSSRPSFKQILSHL 502
RPSF +++S +
Sbjct: 277 KAEMRPSFSELVSRI 291
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 178 LIGSKEEAKISDFGTCREWNNKS-----TKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
++ K K++DFG R+ +K K V WMA E ++ ++ + K D+W
Sbjct: 165 MLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVW 221
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 128/255 (50%), Gaps = 22/255 (8%)
Query: 269 LGSGAQGAVFSG--------KLRSEIVAVKKVREQKE-----TDIRHLRKLNHPNIVKFK 315
+G G G V+ G K+ + ++ ++ + E T+ ++ +HPN++
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 316 GVCTQAPCY-CIVMEYCAYGPLYNLLKDGEEVPPQR-LYNWARQIAAGMNYLHSKQIIHR 373
G+C ++ +V+ Y +G L N +++ P + L + Q+A GM YL SK+ +HR
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 176
Query: 374 DLKSPNVLIGSKEEAKISDFGTCREWNNKS-----TKMSFAGTVAWMAPEVIRNEQCSDK 428
DL + N ++ K K++DFG R+ +K K V WMA E ++ ++ + K
Sbjct: 177 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTK 236
Query: 429 IDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSN 487
D+WS+G++LWEL+T PY DV++ I + L P CPD +M CW
Sbjct: 237 SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR-RLLQPEYCPDPLYEVMLKCWHP 295
Query: 488 APSSRPSFKQILSHL 502
RPSF +++S +
Sbjct: 296 KAEMRPSFSELVSRI 310
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 178 LIGSKEEAKISDFGTCREWNNKS-----TKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
++ K K++DFG R+ +K K V WMA E ++ ++ + K D+W
Sbjct: 184 MLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVW 240
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 135/278 (48%), Gaps = 32/278 (11%)
Query: 269 LGSGAQGAVFSGKLRSE------IVAVKKVREQK--ETDIRHLRK------LNHPNIVKF 314
LGSGA G V+ G E VA+K + E + ++ + + ++HP++V+
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 315 KGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE-VPPQRLYNWARQIAAGMNYLHSKQIIHR 373
GVC +P +V + +G L + + ++ + Q L NW QIA GM YL ++++HR
Sbjct: 106 LGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHR 164
Query: 374 DLKSPNVLIGSKEEAKISDFGTCR-------EWNNKSTKMSFAGTVAWMAPEVIRNEQCS 426
DL + NVL+ S KI+DFG R E+N KM + WMA E I + +
Sbjct: 165 DLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMP----IKWMALECIHYRKFT 220
Query: 427 DKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCW 485
+ D+WSYG+ +WEL+T PY + + I + LP P C ++M CW
Sbjct: 221 HQSDVWSYGVTIWELMTFGGKPYDGIPTREIP-DLLEKGERLPQPPICTIDVYMVMVKCW 279
Query: 486 SNAPSSRPSFKQI---LSHLDIASQEVLRIQPEPYYKM 520
SRP FK++ S + Q L IQ + K+
Sbjct: 280 MIDADSRPKFKELAAEFSRMARDPQRYLVIQGDDRMKL 317
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 39/97 (40%), Gaps = 20/97 (20%)
Query: 177 VLIGSKEEAKISDFGTCR-------EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ S KI+DFG R E+N KM + WMA E I + + + D+W
Sbjct: 171 VLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMP----IKWMALECIHYRKFTHQSDVW 226
Query: 230 YKNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDL 266
S I E +F + IP I DL
Sbjct: 227 ---------SYGVTIWELMTFGGKPYDGIPTREIPDL 254
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 128/255 (50%), Gaps = 22/255 (8%)
Query: 269 LGSGAQGAVFSG--------KLRSEIVAVKKVREQKE-----TDIRHLRKLNHPNIVKFK 315
+G G G V+ G K+ + ++ ++ + E T+ ++ +HPN++
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 316 GVCTQAPCY-CIVMEYCAYGPLYNLLKDGEEVPPQR-LYNWARQIAAGMNYLHSKQIIHR 373
G+C ++ +V+ Y +G L N +++ P + L + Q+A GM YL SK+ +HR
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 155
Query: 374 DLKSPNVLIGSKEEAKISDFGTCREWNNKS-----TKMSFAGTVAWMAPEVIRNEQCSDK 428
DL + N ++ K K++DFG R+ +K K V WMA E ++ ++ + K
Sbjct: 156 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTK 215
Query: 429 IDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSN 487
D+WS+G++LWEL+T PY DV++ I + L P CPD +M CW
Sbjct: 216 SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR-RLLQPEYCPDPLYEVMLKCWHP 274
Query: 488 APSSRPSFKQILSHL 502
RPSF +++S +
Sbjct: 275 KAEMRPSFSELVSRI 289
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 178 LIGSKEEAKISDFGTCREWNNKS-----TKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
++ K K++DFG R+ +K K V WMA E ++ ++ + K D+W
Sbjct: 163 MLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVW 219
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 128/255 (50%), Gaps = 22/255 (8%)
Query: 269 LGSGAQGAVFSG--------KLRSEIVAVKKVREQKE-----TDIRHLRKLNHPNIVKFK 315
+G G G V+ G K+ + ++ ++ + E T+ ++ +HPN++
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 316 GVCTQAPCY-CIVMEYCAYGPLYNLLKDGEEVPPQR-LYNWARQIAAGMNYLHSKQIIHR 373
G+C ++ +V+ Y +G L N +++ P + L + Q+A GM YL SK+ +HR
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 149
Query: 374 DLKSPNVLIGSKEEAKISDFGTCREWNNKS-----TKMSFAGTVAWMAPEVIRNEQCSDK 428
DL + N ++ K K++DFG R+ +K K V WMA E ++ ++ + K
Sbjct: 150 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTK 209
Query: 429 IDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSN 487
D+WS+G++LWEL+T PY DV++ I + L P CPD +M CW
Sbjct: 210 SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR-RLLQPEYCPDPLYEVMLKCWHP 268
Query: 488 APSSRPSFKQILSHL 502
RPSF +++S +
Sbjct: 269 KAEMRPSFSELVSRI 283
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 178 LIGSKEEAKISDFGTCREWNNKS-----TKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
++ K K++DFG R+ +K K V WMA E ++ ++ + K D+W
Sbjct: 157 MLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVW 213
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 128/255 (50%), Gaps = 22/255 (8%)
Query: 269 LGSGAQGAVFSG--------KLRSEIVAVKKVREQKE-----TDIRHLRKLNHPNIVKFK 315
+G G G V+ G K+ + ++ ++ + E T+ ++ +HPN++
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 316 GVCTQAPCY-CIVMEYCAYGPLYNLLKDGEEVPPQR-LYNWARQIAAGMNYLHSKQIIHR 373
G+C ++ +V+ Y +G L N +++ P + L + Q+A GM YL SK+ +HR
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 175
Query: 374 DLKSPNVLIGSKEEAKISDFGTCREWNNKS-----TKMSFAGTVAWMAPEVIRNEQCSDK 428
DL + N ++ K K++DFG R+ +K K V WMA E ++ ++ + K
Sbjct: 176 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTK 235
Query: 429 IDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSN 487
D+WS+G++LWEL+T PY DV++ I + L P CPD +M CW
Sbjct: 236 SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR-RLLQPEYCPDPLYEVMLKCWHP 294
Query: 488 APSSRPSFKQILSHL 502
RPSF +++S +
Sbjct: 295 KAEMRPSFSELVSRI 309
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 178 LIGSKEEAKISDFGTCREWNNKS-----TKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
++ K K++DFG R+ +K K V WMA E ++ ++ + K D+W
Sbjct: 183 MLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVW 239
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 129/253 (50%), Gaps = 21/253 (8%)
Query: 266 LQWLGSGAQGAVFSGKLRSE------IVAVKKVREQKETDIRH--------LRKLNHPNI 311
++ LGSGA G V+ G E VA+K++RE + +++P++
Sbjct: 23 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 82
Query: 312 VKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE-VPPQRLYNWARQIAAGMNYLHSKQI 370
+ G+C + ++ + +G L + +++ ++ + Q L NW QIA GMNYL +++
Sbjct: 83 CRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 141
Query: 371 IHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSD 427
+HRDL + NVL+ + + KI+DFG + + + G + WMA E I + +
Sbjct: 142 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 201
Query: 428 KIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWS 486
+ D+WSYG+ +WEL+T + PY + +S I + LP P C ++M CW
Sbjct: 202 QSDVWSYGVTVWELMTFGSKPYDGIPASE-ISSILEKGERLPQPPICTIDVYMIMVKCWM 260
Query: 487 NAPSSRPSFKQIL 499
SRP F++++
Sbjct: 261 IDADSRPKFRELI 273
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 129/253 (50%), Gaps = 21/253 (8%)
Query: 266 LQWLGSGAQGAVFSGKLRSE------IVAVKKVREQKETDIRH--------LRKLNHPNI 311
++ LGSGA G V+ G E VA+K++RE + +++P++
Sbjct: 23 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 82
Query: 312 VKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE-VPPQRLYNWARQIAAGMNYLHSKQI 370
+ G+C + ++ + +G L + +++ ++ + Q L NW QIA GMNYL +++
Sbjct: 83 CRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 141
Query: 371 IHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSD 427
+HRDL + NVL+ + + KI+DFG + + + G + WMA E I + +
Sbjct: 142 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 201
Query: 428 KIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWS 486
+ D+WSYG+ +WEL+T + PY + +S I + LP P C ++M CW
Sbjct: 202 QSDVWSYGVTVWELMTFGSKPYDGIPASE-ISSILEKGERLPQPPICTIDVYMIMVKCWM 260
Query: 487 NAPSSRPSFKQIL 499
SRP F++++
Sbjct: 261 IDADSRPKFRELI 273
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 129/253 (50%), Gaps = 21/253 (8%)
Query: 266 LQWLGSGAQGAVFSGKLRSE------IVAVKKVREQKETDIRH--------LRKLNHPNI 311
++ LGSGA G V+ G E VA+K++RE + +++P++
Sbjct: 22 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 81
Query: 312 VKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE-VPPQRLYNWARQIAAGMNYLHSKQI 370
+ G+C + ++ + +G L + +++ ++ + Q L NW QIA GMNYL +++
Sbjct: 82 CRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 140
Query: 371 IHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSD 427
+HRDL + NVL+ + + KI+DFG + + + G + WMA E I + +
Sbjct: 141 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 200
Query: 428 KIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWS 486
+ D+WSYG+ +WEL+T + PY + +S I + LP P C ++M CW
Sbjct: 201 QSDVWSYGVTVWELMTFGSKPYDGIPASE-ISSILEKGERLPQPPICTIDVYMIMVKCWM 259
Query: 487 NAPSSRPSFKQIL 499
SRP F++++
Sbjct: 260 IDADSRPKFRELI 272
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 129/253 (50%), Gaps = 21/253 (8%)
Query: 266 LQWLGSGAQGAVFSGKLRSE------IVAVKKVREQKETDIRH--------LRKLNHPNI 311
++ LGSGA G V+ G E VA+K++RE + +++P++
Sbjct: 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 79
Query: 312 VKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE-VPPQRLYNWARQIAAGMNYLHSKQI 370
+ G+C + ++ + +G L + +++ ++ + Q L NW QIA GMNYL +++
Sbjct: 80 CRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 138
Query: 371 IHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSD 427
+HRDL + NVL+ + + KI+DFG + + + G + WMA E I + +
Sbjct: 139 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 198
Query: 428 KIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWS 486
+ D+WSYG+ +WEL+T + PY + +S I + LP P C ++M CW
Sbjct: 199 QSDVWSYGVTVWELMTFGSKPYDGIPASE-ISSILEKGERLPQPPICTIDVYMIMVKCWM 257
Query: 487 NAPSSRPSFKQIL 499
SRP F++++
Sbjct: 258 IDADSRPKFRELI 270
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 129/253 (50%), Gaps = 21/253 (8%)
Query: 266 LQWLGSGAQGAVFSGKLRSE------IVAVKKVREQKETDIRH--------LRKLNHPNI 311
++ LGSGA G V+ G E VA+K++RE + +++P++
Sbjct: 26 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 85
Query: 312 VKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE-VPPQRLYNWARQIAAGMNYLHSKQI 370
+ G+C + ++ + +G L + +++ ++ + Q L NW QIA GMNYL +++
Sbjct: 86 CRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 144
Query: 371 IHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSD 427
+HRDL + NVL+ + + KI+DFG + + + G + WMA E I + +
Sbjct: 145 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 204
Query: 428 KIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWS 486
+ D+WSYG+ +WEL+T + PY + +S I + LP P C ++M CW
Sbjct: 205 QSDVWSYGVTVWELMTFGSKPYDGIPASE-ISSILEKGERLPQPPICTIDVYMIMVKCWM 263
Query: 487 NAPSSRPSFKQIL 499
SRP F++++
Sbjct: 264 IDADSRPKFRELI 276
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 129/253 (50%), Gaps = 21/253 (8%)
Query: 266 LQWLGSGAQGAVFSGKLRSE------IVAVKKVREQKETDIRH--------LRKLNHPNI 311
++ LGSGA G V+ G E VA+K++RE + +++P++
Sbjct: 17 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 76
Query: 312 VKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE-VPPQRLYNWARQIAAGMNYLHSKQI 370
+ G+C + ++ + +G L + +++ ++ + Q L NW QIA GMNYL +++
Sbjct: 77 CRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDRRL 135
Query: 371 IHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSD 427
+HRDL + NVL+ + + KI+DFG + + + G + WMA E I + +
Sbjct: 136 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 195
Query: 428 KIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWS 486
+ D+WSYG+ +WEL+T + PY + +S I + LP P C ++M CW
Sbjct: 196 QSDVWSYGVTVWELMTFGSKPYDGIPASE-ISSILEKGERLPQPPICTIDVYMIMVKCWM 254
Query: 487 NAPSSRPSFKQIL 499
SRP F++++
Sbjct: 255 IDADSRPKFRELI 267
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 129/253 (50%), Gaps = 21/253 (8%)
Query: 266 LQWLGSGAQGAVFSGKLRSE------IVAVKKVREQKETDIRH--------LRKLNHPNI 311
++ LGSGA G V+ G E VA+K++RE + +++P++
Sbjct: 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 79
Query: 312 VKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE-VPPQRLYNWARQIAAGMNYLHSKQI 370
+ G+C + ++ + +G L + +++ ++ + Q L NW QIA GMNYL +++
Sbjct: 80 CRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 138
Query: 371 IHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSD 427
+HRDL + NVL+ + + KI+DFG + + + G + WMA E I + +
Sbjct: 139 VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 198
Query: 428 KIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWS 486
+ D+WSYG+ +WEL+T + PY + +S I + LP P C ++M CW
Sbjct: 199 QSDVWSYGVTVWELMTFGSKPYDGIPASE-ISSILEKGERLPQPPICTIDVYMIMVKCWM 257
Query: 487 NAPSSRPSFKQIL 499
SRP F++++
Sbjct: 258 IDADSRPKFRELI 270
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 128/253 (50%), Gaps = 21/253 (8%)
Query: 266 LQWLGSGAQGAVFSGKLRSE------IVAVKKVREQKETDIRH--------LRKLNHPNI 311
++ LGSGA G V+ G E VA+K++RE + +++P++
Sbjct: 45 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 104
Query: 312 VKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE-VPPQRLYNWARQIAAGMNYLHSKQI 370
+ G+C + I + +G L + +++ ++ + Q L NW QIA GMNYL +++
Sbjct: 105 CRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 163
Query: 371 IHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSD 427
+HRDL + NVL+ + + KI+DFG + + + G + WMA E I + +
Sbjct: 164 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 223
Query: 428 KIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWS 486
+ D+WSYG+ +WEL+T + PY + +S I + LP P C ++M CW
Sbjct: 224 QSDVWSYGVTVWELMTFGSKPYDGIPASE-ISSILEKGERLPQPPICTIDVYMIMVKCWM 282
Query: 487 NAPSSRPSFKQIL 499
SRP F++++
Sbjct: 283 IDADSRPKFRELI 295
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 129/253 (50%), Gaps = 21/253 (8%)
Query: 266 LQWLGSGAQGAVFSGKLRSE------IVAVKKVREQKETDIRH--------LRKLNHPNI 311
++ LGSGA G V+ G E VA+K++RE + +++P++
Sbjct: 27 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 86
Query: 312 VKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE-VPPQRLYNWARQIAAGMNYLHSKQI 370
+ G+C + ++ + +G L + +++ ++ + Q L NW QIA GMNYL +++
Sbjct: 87 CRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 145
Query: 371 IHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSD 427
+HRDL + NVL+ + + KI+DFG + + + G + WMA E I + +
Sbjct: 146 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 205
Query: 428 KIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWS 486
+ D+WSYG+ +WEL+T + PY + +S I + LP P C ++M CW
Sbjct: 206 QSDVWSYGVTVWELMTFGSKPYDGIPASE-ISSILEKGERLPQPPICTIDVYMIMVKCWM 264
Query: 487 NAPSSRPSFKQIL 499
SRP F++++
Sbjct: 265 IDADSRPKFRELI 277
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 128/253 (50%), Gaps = 21/253 (8%)
Query: 266 LQWLGSGAQGAVFSGKLRSE------IVAVKKVREQKETDIRH--------LRKLNHPNI 311
++ LGSGA G V+ G E VA+K++RE + +++P++
Sbjct: 27 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 86
Query: 312 VKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE-VPPQRLYNWARQIAAGMNYLHSKQI 370
+ G+C + I + +G L + +++ ++ + Q L NW QIA GMNYL +++
Sbjct: 87 CRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 145
Query: 371 IHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSD 427
+HRDL + NVL+ + + KI+DFG + + + G + WMA E I + +
Sbjct: 146 VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 205
Query: 428 KIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWS 486
+ D+WSYG+ +WEL+T + PY + +S I + LP P C ++M CW
Sbjct: 206 QSDVWSYGVTVWELMTFGSKPYDGIPASE-ISSILEKGERLPQPPICTIDVYMIMVKCWM 264
Query: 487 NAPSSRPSFKQIL 499
SRP F++++
Sbjct: 265 IDADSRPKFRELI 277
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 129/253 (50%), Gaps = 21/253 (8%)
Query: 266 LQWLGSGAQGAVFSGKLRSE------IVAVKKVREQKETDIRH--------LRKLNHPNI 311
++ L SGA G V+ G E VA+K++RE + +++P++
Sbjct: 27 IKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 86
Query: 312 VKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE-VPPQRLYNWARQIAAGMNYLHSKQI 370
+ G+C + ++M+ +G L + +++ ++ + Q L NW QIA GMNYL +++
Sbjct: 87 CRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 145
Query: 371 IHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSD 427
+HRDL + NVL+ + + KI+DFG + + + G + WMA E I + +
Sbjct: 146 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 205
Query: 428 KIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWS 486
+ D+WSYG+ +WEL+T + PY + +S I + LP P C ++M CW
Sbjct: 206 QSDVWSYGVTVWELMTFGSKPYDGIPASE-ISSILEKGERLPQPPICTIDVYMIMVKCWM 264
Query: 487 NAPSSRPSFKQIL 499
SRP F++++
Sbjct: 265 IDADSRPKFRELI 277
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 129/255 (50%), Gaps = 22/255 (8%)
Query: 269 LGSGAQGAVFSG--------KLRSEIVAVKKVREQKE-----TDIRHLRKLNHPNIVKFK 315
+G G G V+ G K+ + ++ ++ + E T+ ++ +HPN++
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 316 GVCTQAPCY-CIVMEYCAYGPLYNLLKDGEEVPPQR-LYNWARQIAAGMNYLHSKQIIHR 373
G+C ++ +V+ Y +G L N +++ P + L + Q+A GM +L SK+ +HR
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 155
Query: 374 DLKSPNVLIGSKEEAKISDFGTCR-----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDK 428
DL + N ++ K K++DFG R E+++ K V WMA E ++ ++ + K
Sbjct: 156 DLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTK 215
Query: 429 IDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSN 487
D+WS+G++LWEL+T PY DV++ I + L P CPD +M CW
Sbjct: 216 SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR-RLLQPEYCPDPLYEVMLKCWHP 274
Query: 488 APSSRPSFKQILSHL 502
RPSF +++S +
Sbjct: 275 KAEMRPSFSELVSRI 289
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 178 LIGSKEEAKISDFGTCR-----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
++ K K++DFG R E+++ K V WMA E ++ ++ + K D+W
Sbjct: 163 MLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVW 219
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 129/255 (50%), Gaps = 22/255 (8%)
Query: 269 LGSGAQGAVFSG--------KLRSEIVAVKKVREQKE-----TDIRHLRKLNHPNIVKFK 315
+G G G V+ G K+ + ++ ++ + E T+ ++ +HPN++
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 316 GVCTQAPCY-CIVMEYCAYGPLYNLLKDGEEVPPQR-LYNWARQIAAGMNYLHSKQIIHR 373
G+C ++ +V+ Y +G L N +++ P + L + Q+A GM +L SK+ +HR
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 158
Query: 374 DLKSPNVLIGSKEEAKISDFGTCR-----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDK 428
DL + N ++ K K++DFG R E+++ K V WMA E ++ ++ + K
Sbjct: 159 DLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTK 218
Query: 429 IDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSN 487
D+WS+G++LWEL+T PY DV++ I + L P CPD +M CW
Sbjct: 219 SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR-RLLQPEYCPDPLYEVMLKCWHP 277
Query: 488 APSSRPSFKQILSHL 502
RPSF +++S +
Sbjct: 278 KAEMRPSFSELVSRI 292
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 178 LIGSKEEAKISDFGTCR-----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
++ K K++DFG R E+++ K V WMA E ++ ++ + K D+W
Sbjct: 166 MLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVW 222
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 129/255 (50%), Gaps = 22/255 (8%)
Query: 269 LGSGAQGAVFSG--------KLRSEIVAVKKVREQKE-----TDIRHLRKLNHPNIVKFK 315
+G G G V+ G K+ + ++ ++ + E T+ ++ +HPN++
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 316 GVCTQAPCY-CIVMEYCAYGPLYNLLKDGEEVPPQR-LYNWARQIAAGMNYLHSKQIIHR 373
G+C ++ +V+ Y +G L N +++ P + L + Q+A GM +L SK+ +HR
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 158
Query: 374 DLKSPNVLIGSKEEAKISDFGTCR-----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDK 428
DL + N ++ K K++DFG R E+++ K V WMA E ++ ++ + K
Sbjct: 159 DLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTK 218
Query: 429 IDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSN 487
D+WS+G++LWEL+T PY DV++ I + L P CPD +M CW
Sbjct: 219 SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR-RLLQPEYCPDPLYEVMLKCWHP 277
Query: 488 APSSRPSFKQILSHL 502
RPSF +++S +
Sbjct: 278 KAEMRPSFSELVSRI 292
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 178 LIGSKEEAKISDFGTCR-----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
++ K K++DFG R E+++ K V WMA E ++ ++ + K D+W
Sbjct: 166 MLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVW 222
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 129/255 (50%), Gaps = 22/255 (8%)
Query: 269 LGSGAQGAVFSG--------KLRSEIVAVKKVREQKE-----TDIRHLRKLNHPNIVKFK 315
+G G G V+ G K+ + ++ ++ + E T+ ++ +HPN++
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 316 GVCTQAPCY-CIVMEYCAYGPLYNLLKDGEEVPPQR-LYNWARQIAAGMNYLHSKQIIHR 373
G+C ++ +V+ Y +G L N +++ P + L + Q+A GM +L SK+ +HR
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 162
Query: 374 DLKSPNVLIGSKEEAKISDFGTCR-----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDK 428
DL + N ++ K K++DFG R E+++ K V WMA E ++ ++ + K
Sbjct: 163 DLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTK 222
Query: 429 IDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSN 487
D+WS+G++LWEL+T PY DV++ I + L P CPD +M CW
Sbjct: 223 SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR-RLLQPEYCPDPLYEVMLKCWHP 281
Query: 488 APSSRPSFKQILSHL 502
RPSF +++S +
Sbjct: 282 KAEMRPSFSELVSRI 296
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 178 LIGSKEEAKISDFGTCR-----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
++ K K++DFG R E+++ K V WMA E ++ ++ + K D+W
Sbjct: 170 MLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVW 226
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 129/255 (50%), Gaps = 22/255 (8%)
Query: 269 LGSGAQGAVFSG--------KLRSEIVAVKKVREQKE-----TDIRHLRKLNHPNIVKFK 315
+G G G V+ G K+ + ++ ++ + E T+ ++ +HPN++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 316 GVCTQAPCY-CIVMEYCAYGPLYNLLKDGEEVPPQR-LYNWARQIAAGMNYLHSKQIIHR 373
G+C ++ +V+ Y +G L N +++ P + L + Q+A GM +L SK+ +HR
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 157
Query: 374 DLKSPNVLIGSKEEAKISDFGTCR-----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDK 428
DL + N ++ K K++DFG R E+++ K V WMA E ++ ++ + K
Sbjct: 158 DLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTK 217
Query: 429 IDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSN 487
D+WS+G++LWEL+T PY DV++ I + L P CPD +M CW
Sbjct: 218 SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR-RLLQPEYCPDPLYEVMLKCWHP 276
Query: 488 APSSRPSFKQILSHL 502
RPSF +++S +
Sbjct: 277 KAEMRPSFSELVSRI 291
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 178 LIGSKEEAKISDFGTCR-----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
++ K K++DFG R E+++ K V WMA E ++ ++ + K D+W
Sbjct: 165 MLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVW 221
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 129/255 (50%), Gaps = 22/255 (8%)
Query: 269 LGSGAQGAVFSG--------KLRSEIVAVKKVREQKE-----TDIRHLRKLNHPNIVKFK 315
+G G G V+ G K+ + ++ ++ + E T+ ++ +HPN++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 316 GVCTQAPCY-CIVMEYCAYGPLYNLLKDGEEVPPQR-LYNWARQIAAGMNYLHSKQIIHR 373
G+C ++ +V+ Y +G L N +++ P + L + Q+A GM +L SK+ +HR
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 157
Query: 374 DLKSPNVLIGSKEEAKISDFGTCR-----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDK 428
DL + N ++ K K++DFG R E+++ K V WMA E ++ ++ + K
Sbjct: 158 DLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTK 217
Query: 429 IDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSN 487
D+WS+G++LWEL+T PY DV++ I + L P CPD +M CW
Sbjct: 218 SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR-RLLQPEYCPDPLYEVMLKCWHP 276
Query: 488 APSSRPSFKQILSHL 502
RPSF +++S +
Sbjct: 277 KAEMRPSFSELVSRI 291
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 178 LIGSKEEAKISDFGTCR-----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
++ K K++DFG R E+++ K V WMA E ++ ++ + K D+W
Sbjct: 165 MLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVW 221
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 124/253 (49%), Gaps = 25/253 (9%)
Query: 263 ISDLQWLGSGAQGAVFSGKLRSEI----VAVKKVRE----------QKETDIRHLRKLNH 308
I+D++ LG G G+V G R VA+K +++ +E I H +L++
Sbjct: 13 IADIE-LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMH--QLDN 69
Query: 309 PNIVKFKGVCTQAPCYCIVMEYCAYGPLYN-LLKDGEEVPPQRLYNWARQIAAGMNYLHS 367
P IV+ GVC QA +VME GPL+ L+ EE+P + Q++ GM YL
Sbjct: 70 PYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE 128
Query: 368 KQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSF--AGT--VAWMAPEVIRNE 423
K +HRDL + NVL+ ++ AKISDFG + + + AG + W APE I
Sbjct: 129 KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFR 188
Query: 424 QCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMK 482
+ S + D+WSYG+ +WE L+ + PYK + ++ + + P CP LM
Sbjct: 189 KFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK-RMECPPECPPELYALMS 247
Query: 483 MCWSNAPSSRPSF 495
CW RP F
Sbjct: 248 DCWIYKWEDRPDF 260
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSF--AGT--VAWMAPEVIRNEQCSDKIDIW 229
VL+ ++ AKISDFG + + + AG + W APE I + S + D+W
Sbjct: 141 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVW 197
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 121/261 (46%), Gaps = 12/261 (4%)
Query: 252 LRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEIVAVKKVREQKET-----DIRHLRKL 306
L W + + + LQ +G G G V G R VAVK ++ + + +L
Sbjct: 3 LGSGWALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQL 62
Query: 307 NHPNIVKFKGVCTQ-APCYCIVMEYCAYGPLYNLLKD-GEEVPPQR-LYNWARQIAAGMN 363
H N+V+ GV + IV EY A G L + L+ G V L ++ + M
Sbjct: 63 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAME 122
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNE 423
YL +HRDL + NVL+ AK+SDFG +E + ST+ + V W APE +R
Sbjct: 123 YLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS--STQDTGKLPVKWTAPEALREA 180
Query: 424 QCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMK 482
S K D+WS+GI+LWE+ + PY + ++ V + P CP +MK
Sbjct: 181 AFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-EKGYKMDAPDGCPPAVYEVMK 239
Query: 483 MCWSNAPSSRPSFKQILSHLD 503
CW + RPSF Q+ L+
Sbjct: 240 NCWHLDAAMRPSFLQLREQLE 260
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ AK+SDFG +E + ST+ + V W APE +R S K D+W
Sbjct: 139 VLVSEDNVAKVSDFGLTKEAS--STQDTGKLPVKWTAPEALREAAFSTKSDVW 189
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 129/255 (50%), Gaps = 22/255 (8%)
Query: 269 LGSGAQGAVFSG--------KLRSEIVAVKKVREQKE-----TDIRHLRKLNHPNIVKFK 315
+G G G V+ G K+ + ++ ++ + E T+ ++ +HPN++
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 316 GVCTQAPCY-CIVMEYCAYGPLYNLLKDGEEVPPQR-LYNWARQIAAGMNYLHSKQIIHR 373
G+C ++ +V+ Y +G L N +++ P + L + Q+A GM +L SK+ +HR
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 216
Query: 374 DLKSPNVLIGSKEEAKISDFGTCR-----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDK 428
DL + N ++ K K++DFG R E+++ K V WMA E ++ ++ + K
Sbjct: 217 DLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTK 276
Query: 429 IDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSN 487
D+WS+G++LWEL+T PY DV++ I + L P CPD +M CW
Sbjct: 277 SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR-RLLQPEYCPDPLYEVMLKCWHP 335
Query: 488 APSSRPSFKQILSHL 502
RPSF +++S +
Sbjct: 336 KAEMRPSFSELVSRI 350
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 178 LIGSKEEAKISDFGTCR-----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
++ K K++DFG R E+++ K V WMA E ++ ++ + K D+W
Sbjct: 224 MLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVW 280
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 126/246 (51%), Gaps = 17/246 (6%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVK---KVREQKETDIRHLRK-------LNHPNIVKFKG 316
LG G G V+ + + I+A+K K + +K LR+ L HPNI++ G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLK 376
A +++EY G +Y L+ + QR + ++A ++Y HSK++IHRD+K
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 136
Query: 377 SPNVLIGSKEEAKISDFG-TCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYG 435
N+L+GS E KI+DFG +C +++ T +S GT+ ++ PE+I +K+D+WS G
Sbjct: 137 PENLLLGSAGELKIADFGWSCHAPSSRRTTLS--GTLDYLPPEMIEGRMHDEKVDLWSLG 194
Query: 436 IVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSF 495
++ +E L + P++ + S + P +G + L+ + PS RP
Sbjct: 195 VLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPML 252
Query: 496 KQILSH 501
+++L H
Sbjct: 253 REVLEH 258
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 177 VLIGSKEEAKISDFG-TCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNRLC 235
+L+GS E KI+DFG +C +++ T +S GT+ ++ PE+I +K+D+W LC
Sbjct: 140 LLLGSAGELKIADFGWSCHAPSSRRTTLS--GTLDYLPPEMIEGRMHDEKVDLWSLGVLC 197
Query: 236 F 236
+
Sbjct: 198 Y 198
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 121/261 (46%), Gaps = 32/261 (12%)
Query: 269 LGSGAQGAVFSGKLRSE-------IVAVKKVREQKET-------DIRHLRKLNHPNIVKF 314
LG GA G VF + + +VAVK +++ + + L L H +IVKF
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 315 KGVCTQAPCYCIVMEYCAYGPLYNLLKD--------GEEVPPQRL-----YNWARQIAAG 361
GVC + +V EY +G L L+ E PP L + A+QIAAG
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 362 MNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPE 418
M YL S+ +HRDL + N L+G KI DFG R+ + T + WM PE
Sbjct: 141 MVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPE 200
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
I + + + D+WS G+VLWE+ T + P+ + ++ +I + + L P TCP
Sbjct: 201 SIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRV-LQRPRTCPQEV 259
Query: 478 QLLMKMCWSNAPSSRPSFKQI 498
LM CW P R + K I
Sbjct: 260 YELMLGCWQREPHMRKNIKGI 280
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 127/253 (50%), Gaps = 21/253 (8%)
Query: 266 LQWLGSGAQGAVFSGKLRSE------IVAVKKVREQKETDIRH--------LRKLNHPNI 311
++ LGSGA G V+ G E VA+ ++RE + +++P++
Sbjct: 54 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHV 113
Query: 312 VKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE-VPPQRLYNWARQIAAGMNYLHSKQI 370
+ G+C + I + +G L + +++ ++ + Q L NW QIA GMNYL +++
Sbjct: 114 CRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 172
Query: 371 IHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSD 427
+HRDL + NVL+ + + KI+DFG + + + G + WMA E I + +
Sbjct: 173 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 232
Query: 428 KIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWS 486
+ D+WSYG+ +WEL+T + PY + +S I + LP P C ++M CW
Sbjct: 233 QSDVWSYGVTVWELMTFGSKPYDGIPASE-ISSILEKGERLPQPPICTIDVYMIMVKCWM 291
Query: 487 NAPSSRPSFKQIL 499
SRP F++++
Sbjct: 292 IDADSRPKFRELI 304
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 133/277 (48%), Gaps = 29/277 (10%)
Query: 256 WEIPFESISDLQWLGSGAQGAVFSGKLR-SEIVAVKKVREQKE--------TDIRHLRKL 306
WEI E LG GA G V+ K + + +A KV E K +I L
Sbjct: 21 WEIVGE-------LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATC 73
Query: 307 NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAGMNY 364
+HP IVK G I++E+C G + ++ D PQ + RQ+ +N+
Sbjct: 74 DHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ-IQVVCRQMLEALNF 132
Query: 365 LHSKQIIHRDLKSPNVLIGSKEEAKISDFG-TCREWNNKSTKMSFAGTVAWMAPEVIRNE 423
LHSK+IIHRDLK+ NVL+ + + +++DFG + + + SF GT WMAPEV+ E
Sbjct: 133 LHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCE 192
Query: 424 QCSD-----KIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSS-LHLPIPSTCPDGF 477
D K DIWS GI L E+ E P+ +++ ++ + S L PS F
Sbjct: 193 TMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEF 252
Query: 478 QLLMKMCWSNAPSSRPSFKQILSH---LDIASQEVLR 511
+ +K+ P +RPS Q+L H I S + LR
Sbjct: 253 RDFLKIALDKNPETRPSAAQLLEHPFVSSITSNKALR 289
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Query: 177 VLIGSKEEAKISDFG-TCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSD-----KIDIW 229
VL+ + + +++DFG + + + SF GT WMAPEV+ E D K DIW
Sbjct: 148 VLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIW 206
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 133/277 (48%), Gaps = 29/277 (10%)
Query: 256 WEIPFESISDLQWLGSGAQGAVFSGKLR-SEIVAVKKVREQKE--------TDIRHLRKL 306
WEI E LG GA G V+ K + + +A KV E K +I L
Sbjct: 13 WEIVGE-------LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATC 65
Query: 307 NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAGMNY 364
+HP IVK G I++E+C G + ++ D PQ + RQ+ +N+
Sbjct: 66 DHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ-IQVVCRQMLEALNF 124
Query: 365 LHSKQIIHRDLKSPNVLIGSKEEAKISDFG-TCREWNNKSTKMSFAGTVAWMAPEVIRNE 423
LHSK+IIHRDLK+ NVL+ + + +++DFG + + + SF GT WMAPEV+ E
Sbjct: 125 LHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCE 184
Query: 424 QCSD-----KIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSS-LHLPIPSTCPDGF 477
D K DIWS GI L E+ E P+ +++ ++ + S L PS F
Sbjct: 185 TMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEF 244
Query: 478 QLLMKMCWSNAPSSRPSFKQILSH---LDIASQEVLR 511
+ +K+ P +RPS Q+L H I S + LR
Sbjct: 245 RDFLKIALDKNPETRPSAAQLLEHPFVSSITSNKALR 281
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Query: 177 VLIGSKEEAKISDFG-TCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSD-----KIDIW 229
VL+ + + +++DFG + + + SF GT WMAPEV+ E D K DIW
Sbjct: 140 VLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIW 198
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 128/257 (49%), Gaps = 19/257 (7%)
Query: 259 PFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKV--------REQKETDIRHLRKLNH 308
P E + L+ +G G+ G VF G ++VA+K + E + +I L + +
Sbjct: 21 PEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS 80
Query: 309 PNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK 368
+ K+ G + I+MEY G +LL+ G ++ ++I G++YLHS+
Sbjct: 81 SYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGP-FDEFQIATMLKEILKGLDYLHSE 139
Query: 369 QIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKM-SFAGTVAWMAPEVIRNEQCSD 427
+ IHRD+K+ NVL+ + + K++DFG + + K +F GT WMAPEVI+
Sbjct: 140 KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDS 199
Query: 428 KIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPD---GFQLLMKMC 484
K DIWS GI EL E P D+ +++ + ++ P+ D F+ + C
Sbjct: 200 KADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNN----PPTLVGDFTKSFKEFIDAC 255
Query: 485 WSNAPSSRPSFKQILSH 501
+ PS RP+ K++L H
Sbjct: 256 LNKDPSFRPTAKELLKH 272
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKM-SFAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ + + K++DFG + + K +F GT WMAPEVI+ K DIW
Sbjct: 151 VLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIW 204
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 128/253 (50%), Gaps = 21/253 (8%)
Query: 266 LQWLGSGAQGAVFSGKLRSE------IVAVKKVREQKETDIRH--------LRKLNHPNI 311
++ L SGA G V+ G E VA+K++RE + +++P++
Sbjct: 20 IKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 79
Query: 312 VKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE-VPPQRLYNWARQIAAGMNYLHSKQI 370
+ G+C + ++ + +G L + +++ ++ + Q L NW QIA GMNYL +++
Sbjct: 80 CRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 138
Query: 371 IHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSD 427
+HRDL + NVL+ + + KI+DFG + + + G + WMA E I + +
Sbjct: 139 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 198
Query: 428 KIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWS 486
+ D+WSYG+ +WEL+T + PY + +S I + LP P C ++M CW
Sbjct: 199 QSDVWSYGVTVWELMTFGSKPYDGIPASE-ISSILEKGERLPQPPICTIDVYMIMVKCWM 257
Query: 487 NAPSSRPSFKQIL 499
SRP F++++
Sbjct: 258 IDADSRPKFRELI 270
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 125/263 (47%), Gaps = 19/263 (7%)
Query: 240 LMARIGEFK-SFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEIVAVKKVREQKET 298
L+ ++G+ V R EW+ P SG +V L+ ++++ + +
Sbjct: 22 LLEKLGDGSFGVVRRGEWDAP-----------SGKTVSVAVKCLKPDVLSQPEAMDDFIR 70
Query: 299 DIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGE-EVPPQRLYNWARQ 357
++ + L+H N+++ GV P +V E G L + L+ + L +A Q
Sbjct: 71 EVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ 129
Query: 358 IAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREW--NNKSTKMSFAGTV--A 413
+A GM YL SK+ IHRDL + N+L+ +++ KI DFG R N+ M V A
Sbjct: 130 VAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFA 189
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPST 472
W APE ++ S D W +G+ LWE+ T + P+ ++ S I+ + LP P
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 249
Query: 473 CPDGFQLLMKMCWSNAPSSRPSF 495
CP +M CW++ P RP+F
Sbjct: 250 CPQDIYNVMVQCWAHKPEDRPTF 272
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 125/263 (47%), Gaps = 19/263 (7%)
Query: 240 LMARIGEFK-SFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEIVAVKKVREQKET 298
L+ ++G+ V R EW+ P SG +V L+ ++++ + +
Sbjct: 12 LLEKLGDGSFGVVRRGEWDAP-----------SGKTVSVAVKCLKPDVLSQPEAMDDFIR 60
Query: 299 DIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGE-EVPPQRLYNWARQ 357
++ + L+H N+++ GV P +V E G L + L+ + L +A Q
Sbjct: 61 EVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ 119
Query: 358 IAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREW--NNKSTKMSFAGTV--A 413
+A GM YL SK+ IHRDL + N+L+ +++ KI DFG R N+ M V A
Sbjct: 120 VAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFA 179
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPST 472
W APE ++ S D W +G+ LWE+ T + P+ ++ S I+ + LP P
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 239
Query: 473 CPDGFQLLMKMCWSNAPSSRPSF 495
CP +M CW++ P RP+F
Sbjct: 240 CPQDIYNVMVQCWAHKPEDRPTF 262
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 128/253 (50%), Gaps = 21/253 (8%)
Query: 266 LQWLGSGAQGAVFSGKLRSE------IVAVKKVREQKETDIRH--------LRKLNHPNI 311
++ L SGA G V+ G E VA+K++RE + +++P++
Sbjct: 27 IKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 86
Query: 312 VKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE-VPPQRLYNWARQIAAGMNYLHSKQI 370
+ G+C + ++ + +G L + +++ ++ + Q L NW QIA GMNYL +++
Sbjct: 87 CRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 145
Query: 371 IHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSD 427
+HRDL + NVL+ + + KI+DFG + + + G + WMA E I + +
Sbjct: 146 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 205
Query: 428 KIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWS 486
+ D+WSYG+ +WEL+T + PY + +S I + LP P C ++M CW
Sbjct: 206 QSDVWSYGVTVWELMTFGSKPYDGIPASE-ISSILEKGERLPQPPICTIDVYMIMVKCWM 264
Query: 487 NAPSSRPSFKQIL 499
SRP F++++
Sbjct: 265 IDADSRPKFRELI 277
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 133/270 (49%), Gaps = 26/270 (9%)
Query: 258 IPFESI---SDLQWLGSGAQGAVFSG--------KLRSEIVAVKKVRE--QKETDIRH-- 302
IP E + SD + +G G G V+ G +++ I ++ ++ E Q E +R
Sbjct: 16 IPHERVVTHSD-RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGL 74
Query: 303 -LRKLNHPNIVKFKGVCTQAPCYC-IVMEYCAYGPLYNLLKDGEEVPPQR-LYNWARQIA 359
+R LNHPN++ G+ +++ Y +G L ++ + P + L ++ Q+A
Sbjct: 75 LMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVA 134
Query: 360 AGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTC-----REWNNKSTKMSFAGTVAW 414
GM YL ++ +HRDL + N ++ K++DFG RE+ + V W
Sbjct: 135 RGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKW 194
Query: 415 MAPEVIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTC 473
A E ++ + + K D+WS+G++LWELLT PY+ +D + + LP P C
Sbjct: 195 TALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGR-RLPQPEYC 253
Query: 474 PDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
PD +M+ CW P+ RP+F+ ++ ++
Sbjct: 254 PDSLYQVMQQCWEADPAVRPTFRVLVGEVE 283
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 123/248 (49%), Gaps = 21/248 (8%)
Query: 269 LGSGAQGAVFSG--KLRSEIVAVK---KVREQKETDIRHLRK-------LNHPNIVKFKG 316
LG G G V+ K R I+A+K K + +K LR+ L HPNI++ G
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLK 376
A +++EY G +Y L+ + QR + ++A ++Y HSK++IHRD+K
Sbjct: 73 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 132
Query: 377 SPNVLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWS 433
N+L+GS E KI+DFG W+ S + + GT+ ++ PE+I +K+D+WS
Sbjct: 133 PENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 188
Query: 434 YGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRP 493
G++ +E L + P++ + S + P +G + L+ + PS RP
Sbjct: 189 LGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRP 246
Query: 494 SFKQILSH 501
+++L H
Sbjct: 247 MLREVLEH 254
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 177 VLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+GS E KI+DFG W+ S + + GT+ ++ PE+I +K+D+W
Sbjct: 136 LLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 191
Query: 234 LCF 236
LC+
Sbjct: 192 LCY 194
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 125/263 (47%), Gaps = 19/263 (7%)
Query: 240 LMARIGEFK-SFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEIVAVKKVREQKET 298
L+ ++G+ V R EW+ P SG +V L+ ++++ + +
Sbjct: 22 LLEKLGDGSFGVVRRGEWDAP-----------SGKTVSVAVKCLKPDVLSQPEAMDDFIR 70
Query: 299 DIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGE-EVPPQRLYNWARQ 357
++ + L+H N+++ GV P +V E G L + L+ + L +A Q
Sbjct: 71 EVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ 129
Query: 358 IAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREW--NNKSTKMSFAGTV--A 413
+A GM YL SK+ IHRDL + N+L+ +++ KI DFG R N+ M V A
Sbjct: 130 VAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 189
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPST 472
W APE ++ S D W +G+ LWE+ T + P+ ++ S I+ + LP P
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 249
Query: 473 CPDGFQLLMKMCWSNAPSSRPSF 495
CP +M CW++ P RP+F
Sbjct: 250 CPQDIYNVMVQCWAHKPEDRPTF 272
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 125/263 (47%), Gaps = 19/263 (7%)
Query: 240 LMARIGEFK-SFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEIVAVKKVREQKET 298
L+ ++G+ V R EW+ P SG +V L+ ++++ + +
Sbjct: 16 LLEKLGDGSFGVVRRGEWDAP-----------SGKTVSVAVKCLKPDVLSQPEAMDDFIR 64
Query: 299 DIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGE-EVPPQRLYNWARQ 357
++ + L+H N+++ GV P +V E G L + L+ + L +A Q
Sbjct: 65 EVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ 123
Query: 358 IAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREW--NNKSTKMSFAGTV--A 413
+A GM YL SK+ IHRDL + N+L+ +++ KI DFG R N+ M V A
Sbjct: 124 VAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 183
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPST 472
W APE ++ S D W +G+ LWE+ T + P+ ++ S I+ + LP P
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 243
Query: 473 CPDGFQLLMKMCWSNAPSSRPSF 495
CP +M CW++ P RP+F
Sbjct: 244 CPQDIYNVMVQCWAHKPEDRPTF 266
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 125/263 (47%), Gaps = 19/263 (7%)
Query: 240 LMARIGEFK-SFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEIVAVKKVREQKET 298
L+ ++G+ V R EW+ P SG +V L+ ++++ + +
Sbjct: 16 LLEKLGDGSFGVVRRGEWDAP-----------SGKTVSVAVKCLKPDVLSQPEAMDDFIR 64
Query: 299 DIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGE-EVPPQRLYNWARQ 357
++ + L+H N+++ GV P +V E G L + L+ + L +A Q
Sbjct: 65 EVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ 123
Query: 358 IAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREW--NNKSTKMSFAGTV--A 413
+A GM YL SK+ IHRDL + N+L+ +++ KI DFG R N+ M V A
Sbjct: 124 VAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 183
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPST 472
W APE ++ S D W +G+ LWE+ T + P+ ++ S I+ + LP P
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 243
Query: 473 CPDGFQLLMKMCWSNAPSSRPSF 495
CP +M CW++ P RP+F
Sbjct: 244 CPQDIYNVMVQCWAHKPEDRPTF 266
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 125/263 (47%), Gaps = 19/263 (7%)
Query: 240 LMARIGEFK-SFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEIVAVKKVREQKET 298
L+ ++G+ V R EW+ P SG +V L+ ++++ + +
Sbjct: 12 LLEKLGDGSFGVVRRGEWDAP-----------SGKTVSVAVKCLKPDVLSQPEAMDDFIR 60
Query: 299 DIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGE-EVPPQRLYNWARQ 357
++ + L+H N+++ GV P +V E G L + L+ + L +A Q
Sbjct: 61 EVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ 119
Query: 358 IAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREW--NNKSTKMSFAGTV--A 413
+A GM YL SK+ IHRDL + N+L+ +++ KI DFG R N+ M V A
Sbjct: 120 VAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 179
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPST 472
W APE ++ S D W +G+ LWE+ T + P+ ++ S I+ + LP P
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 239
Query: 473 CPDGFQLLMKMCWSNAPSSRPSF 495
CP +M CW++ P RP+F
Sbjct: 240 CPQDIYNVMVQCWAHKPEDRPTF 262
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 125/263 (47%), Gaps = 19/263 (7%)
Query: 240 LMARIGEFK-SFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEIVAVKKVREQKET 298
L+ ++G+ V R EW+ P SG +V L+ ++++ + +
Sbjct: 12 LLEKLGDGSFGVVRRGEWDAP-----------SGKTVSVAVKCLKPDVLSQPEAMDDFIR 60
Query: 299 DIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGE-EVPPQRLYNWARQ 357
++ + L+H N+++ GV P +V E G L + L+ + L +A Q
Sbjct: 61 EVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ 119
Query: 358 IAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREW--NNKSTKMSFAGTV--A 413
+A GM YL SK+ IHRDL + N+L+ +++ KI DFG R N+ M V A
Sbjct: 120 VAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 179
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPST 472
W APE ++ S D W +G+ LWE+ T + P+ ++ S I+ + LP P
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 239
Query: 473 CPDGFQLLMKMCWSNAPSSRPSF 495
CP +M CW++ P RP+F
Sbjct: 240 CPQDIYNVMVQCWAHKPEDRPTF 262
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 128/266 (48%), Gaps = 39/266 (14%)
Query: 269 LGSGAQGAVFSGKLRS-------EIVAVKKVRE---------QKETDIRHLRKLNHPNIV 312
LG GA G VF + + +VAVK +++ Q+E ++ L L H +IV
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAEL--LTNLQHEHIV 80
Query: 313 KFKGVCTQAPCYCIVMEYC----------AYGPLYNLLKDGE------EVPPQRLYNWAR 356
KF GVC +V EY A+GP +L DG+ E+ ++ + A
Sbjct: 81 KFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 140
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VA 413
QIA+GM YL S+ +HRDL + N L+G+ KI DFG R+ + T +
Sbjct: 141 QIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR 200
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPST 472
WM PE I + + + D+WS+G++LWE+ T + P+ + ++ +I + + L P
Sbjct: 201 WMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRV-LERPRV 259
Query: 473 CPDGFQLLMKMCWSNAPSSRPSFKQI 498
CP +M CW P R + K+I
Sbjct: 260 CPKEVYDVMLGCWQREPQQRLNIKEI 285
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 125/256 (48%), Gaps = 25/256 (9%)
Query: 263 ISDLQWLGSGAQGAVFSGKLRSEI----VAVKKVRE----------QKETDIRHLRKLNH 308
I+D++ LG G G+V G R VA+K +++ +E I H +L++
Sbjct: 339 IADIE-LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMH--QLDN 395
Query: 309 PNIVKFKGVCTQAPCYCIVMEYCAYGPLYN-LLKDGEEVPPQRLYNWARQIAAGMNYLHS 367
P IV+ GVC QA +VME GPL+ L+ EE+P + Q++ GM YL
Sbjct: 396 PYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE 454
Query: 368 KQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSF--AGT--VAWMAPEVIRNE 423
K +HR+L + NVL+ ++ AKISDFG + + + AG + W APE I
Sbjct: 455 KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFR 514
Query: 424 QCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMK 482
+ S + D+WSYG+ +WE L+ + PYK + ++ + + P CP LM
Sbjct: 515 KFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK-RMECPPECPPELYALMS 573
Query: 483 MCWSNAPSSRPSFKQI 498
CW RP F +
Sbjct: 574 DCWIYKWEDRPDFLTV 589
Score = 32.0 bits (71), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSF--AGT--VAWMAPEVIRNEQCSDKIDIW 229
VL+ ++ AKISDFG + + + AG + W APE I + S + D+W
Sbjct: 467 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVW 523
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 130/262 (49%), Gaps = 32/262 (12%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVKKV--------------REQKETDIRHLRKLNHPNIV 312
+G G G V G+L + +VA+K + ++ + ++ + LNHPNIV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 313 KFKGVCTQAPCYCIVMEYCAYGPLYN-LLKDGEEVPPQRLYNWARQIAAGMNYLHSKQ-- 369
K G+ P +VME+ G LY+ LL + IA G+ Y+ ++
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPP 144
Query: 370 IIHRDLKSPNVLIGSKEE-----AKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQ 424
I+HRDL+SPN+ + S +E AK++DFGT ++ + + + G WMAPE I E+
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGL--LGNFQWMAPETIGAEE 202
Query: 425 CS--DKIDIWSYGIVLWELLTCETPYKDVDSSAI--IWGVGSSSLHLPIPSTCPDGFQLL 480
S +K D +S+ ++L+ +LT E P+ + I I + L IP CP + +
Sbjct: 203 ESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNV 262
Query: 481 MKMCWSNAPSSRPSFKQILSHL 502
+++CWS P RP F I+ L
Sbjct: 263 IELCWSGDPKKRPHFSYIVKEL 284
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Query: 185 AKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCS--DKIDIW 229
AK++DFGT ++ + + + G WMAPE I E+ S +K D +
Sbjct: 168 AKVADFGTSQQSVHSVSGL--LGNFQWMAPETIGAEEESYTEKADTY 212
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 132/283 (46%), Gaps = 37/283 (13%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFSG-------KLRSEIVAVKKVRE-----QKETDIRH 302
+WE P + ++ + LG GA G V VAVK ++E + +
Sbjct: 21 KWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSE 80
Query: 303 LRKL----NHPNIVKFKGVCTQ--APCYCIVMEYCAYGPLYNLL--KDGEEVPPQRLYN- 353
L+ L +H N+V G CT+ P IV E+C +G L L K E VP + LY
Sbjct: 81 LKILIHIGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKDLYKD 139
Query: 354 ---------WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKST 404
++ Q+A GM +L S++ IHRDL + N+L+ K KI DFG R+
Sbjct: 140 FLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPD 199
Query: 405 KMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDVDSSAIIWGV 460
+ + WMAPE I + + + D+WS+G++LWE+ + +PY V
Sbjct: 200 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRR 259
Query: 461 GSSSLHLPIPS-TCPDGFQLLMKMCWSNAPSSRPSFKQILSHL 502
+ P T P+ +Q ++ CW PS RP+F +++ HL
Sbjct: 260 LKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHL 301
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIW 229
+L+ K KI DFG R+ + + WMAPE I + + + D+W
Sbjct: 175 ILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVW 230
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 123/248 (49%), Gaps = 21/248 (8%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVK---KVREQKETDIRHLRK-------LNHPNIVKFKG 316
LG G G V+ + + I+A+K K + +K LR+ L HPNI++ G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLK 376
A +++EY G +Y L+ + QR + ++A ++Y HSK++IHRD+K
Sbjct: 93 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 152
Query: 377 SPNVLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWS 433
N+L+GS E KI+DFG W+ S + + GT+ ++ PE+I +K+D+WS
Sbjct: 153 PENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 208
Query: 434 YGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRP 493
G++ +E L + P++ + S + P +G + L+ + PS RP
Sbjct: 209 LGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRP 266
Query: 494 SFKQILSH 501
+++L H
Sbjct: 267 MLREVLEH 274
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 177 VLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+GS E KI+DFG W+ S + + GT+ ++ PE+I +K+D+W
Sbjct: 156 LLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 211
Query: 234 LCF 236
LC+
Sbjct: 212 LCY 214
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 123/248 (49%), Gaps = 21/248 (8%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVK---KVREQKETDIRHLRK-------LNHPNIVKFKG 316
LG G G V+ + + I+A+K K + +K LR+ L HPNI++ G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLK 376
A +++EY G +Y L+ + QR + ++A ++Y HSK++IHRD+K
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 138
Query: 377 SPNVLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWS 433
N+L+GS E KI+DFG W+ S + + GT+ ++ PE+I +K+D+WS
Sbjct: 139 PENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 194
Query: 434 YGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRP 493
G++ +E L + P++ + S + P +G + L+ + PS RP
Sbjct: 195 LGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRP 252
Query: 494 SFKQILSH 501
+++L H
Sbjct: 253 MLREVLEH 260
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 177 VLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+GS E KI+DFG W+ S + + GT+ ++ PE+I +K+D+W
Sbjct: 142 LLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 197
Query: 234 LCF 236
LC+
Sbjct: 198 LCY 200
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 103/201 (51%), Gaps = 7/201 (3%)
Query: 303 LRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGM 362
+++L++P IV+ G+C +A + +VME GPL L+ V + + Q++ GM
Sbjct: 72 MQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGM 130
Query: 363 NYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPE 418
YL +HRDL + NVL+ ++ AKISDFG + + N + V W APE
Sbjct: 131 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 190
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
I + S K D+WS+G+++WE + + PY+ + S + + + P+ CP
Sbjct: 191 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGERMGCPAGCPREM 249
Query: 478 QLLMKMCWSNAPSSRPSFKQI 498
LM +CW+ +RP F +
Sbjct: 250 YDLMNLCWTYDVENRPGFAAV 270
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 177 VLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ ++ AKISDFG + + N + V W APE I + S K D+W
Sbjct: 148 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 204
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 123/248 (49%), Gaps = 21/248 (8%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVK---KVREQKETDIRHLRK-------LNHPNIVKFKG 316
LG G G V+ + + I+A+K K + +K LR+ L HPNI++ G
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLK 376
A +++EY G +Y L+ + QR + ++A ++Y HSK++IHRD+K
Sbjct: 75 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 134
Query: 377 SPNVLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWS 433
N+L+GS E KI+DFG W+ S + + GT+ ++ PE+I +K+D+WS
Sbjct: 135 PENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 190
Query: 434 YGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRP 493
G++ +E L + P++ + S + P +G + L+ + PS RP
Sbjct: 191 LGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRP 248
Query: 494 SFKQILSH 501
+++L H
Sbjct: 249 MLREVLEH 256
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 177 VLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+GS E KI+DFG W+ S + + GT+ ++ PE+I +K+D+W
Sbjct: 138 LLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 193
Query: 234 LCF 236
LC+
Sbjct: 194 LCY 196
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 123/248 (49%), Gaps = 21/248 (8%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVK---KVREQKETDIRHLRK-------LNHPNIVKFKG 316
LG G G V+ + + I+A+K K + +K LR+ L HPNI++ G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLK 376
A +++EY G +Y L+ + QR + ++A ++Y HSK++IHRD+K
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 138
Query: 377 SPNVLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWS 433
N+L+GS E KI+DFG W+ S + + GT+ ++ PE+I +K+D+WS
Sbjct: 139 PENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 194
Query: 434 YGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRP 493
G++ +E L + P++ + S + P +G + L+ + PS RP
Sbjct: 195 LGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRP 252
Query: 494 SFKQILSH 501
+++L H
Sbjct: 253 MLREVLEH 260
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 177 VLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+GS E KI+DFG W+ S + + GT+ ++ PE+I +K+D+W
Sbjct: 142 LLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 197
Query: 234 LCF 236
LC+
Sbjct: 198 LCY 200
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 103/201 (51%), Gaps = 7/201 (3%)
Query: 303 LRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGM 362
+++L++P IV+ G+C +A + +VME GPL L+ V + + Q++ GM
Sbjct: 66 MQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGM 124
Query: 363 NYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPE 418
YL +HRDL + NVL+ ++ AKISDFG + + N + V W APE
Sbjct: 125 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPE 184
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
I + S K D+WS+G+++WE + + PY+ + S + + + P+ CP
Sbjct: 185 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGERMGCPAGCPREM 243
Query: 478 QLLMKMCWSNAPSSRPSFKQI 498
LM +CW+ +RP F +
Sbjct: 244 YDLMNLCWTYDVENRPGFAAV 264
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 177 VLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ ++ AKISDFG + + N + V W APE I + S K D+W
Sbjct: 142 VLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 198
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 123/248 (49%), Gaps = 21/248 (8%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVK---KVREQKETDIRHLRK-------LNHPNIVKFKG 316
LG G G V+ + + I+A+K K + +K LR+ L HPNI++ G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLK 376
A +++EY G +Y L+ + QR + ++A ++Y HSK++IHRD+K
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 140
Query: 377 SPNVLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWS 433
N+L+GS E KI+DFG W+ S + + GT+ ++ PE+I +K+D+WS
Sbjct: 141 PENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 196
Query: 434 YGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRP 493
G++ +E L + P++ + S + P +G + L+ + PS RP
Sbjct: 197 LGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRP 254
Query: 494 SFKQILSH 501
+++L H
Sbjct: 255 MLREVLEH 262
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 177 VLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+GS E KI+DFG W+ S + + GT+ ++ PE+I +K+D+W
Sbjct: 144 LLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 199
Query: 234 LCF 236
LC+
Sbjct: 200 LCY 202
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 123/248 (49%), Gaps = 21/248 (8%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVK---KVREQKETDIRHLRK-------LNHPNIVKFKG 316
LG G G V+ + + I+A+K K + +K LR+ L HPNI++ G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLK 376
A +++EY G +Y L+ + QR + ++A ++Y HSK++IHRD+K
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 161
Query: 377 SPNVLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWS 433
N+L+GS E KI+DFG W+ S + + GT+ ++ PE+I +K+D+WS
Sbjct: 162 PENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 217
Query: 434 YGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRP 493
G++ +E L + P++ + S + P +G + L+ + PS RP
Sbjct: 218 LGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRP 275
Query: 494 SFKQILSH 501
+++L H
Sbjct: 276 MLREVLEH 283
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 177 VLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+GS E KI+DFG W+ S + + GT+ ++ PE+I +K+D+W
Sbjct: 165 LLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 220
Query: 234 LCF 236
LC+
Sbjct: 221 LCY 223
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 103/201 (51%), Gaps = 7/201 (3%)
Query: 303 LRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGM 362
+++L++P IV+ G+C +A + +VME GPL L+ V + + Q++ GM
Sbjct: 82 MQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGM 140
Query: 363 NYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPE 418
YL +HRDL + NVL+ ++ AKISDFG + + N + V W APE
Sbjct: 141 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 200
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
I + S K D+WS+G+++WE + + PY+ + S + + + P+ CP
Sbjct: 201 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGERMGCPAGCPREM 259
Query: 478 QLLMKMCWSNAPSSRPSFKQI 498
LM +CW+ +RP F +
Sbjct: 260 YDLMNLCWTYDVENRPGFAAV 280
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 177 VLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ ++ AKISDFG + + N + V W APE I + S K D+W
Sbjct: 158 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 214
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 103/201 (51%), Gaps = 7/201 (3%)
Query: 303 LRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGM 362
+++L++P IV+ G+C +A + +VME GPL L+ V + + Q++ GM
Sbjct: 82 MQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGM 140
Query: 363 NYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPE 418
YL +HRDL + NVL+ ++ AKISDFG + + N + V W APE
Sbjct: 141 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 200
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
I + S K D+WS+G+++WE + + PY+ + S + + + P+ CP
Sbjct: 201 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGERMGCPAGCPREM 259
Query: 478 QLLMKMCWSNAPSSRPSFKQI 498
LM +CW+ +RP F +
Sbjct: 260 YDLMNLCWTYDVENRPGFAAV 280
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 177 VLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ ++ AKISDFG + + N + V W APE I + S K D+W
Sbjct: 158 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 214
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 103/201 (51%), Gaps = 7/201 (3%)
Query: 303 LRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGM 362
+++L++P IV+ G+C +A + +VME GPL L+ V + + Q++ GM
Sbjct: 62 MQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGM 120
Query: 363 NYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPE 418
YL +HRDL + NVL+ ++ AKISDFG + + N + V W APE
Sbjct: 121 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 180
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
I + S K D+WS+G+++WE + + PY+ + S + + + P+ CP
Sbjct: 181 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGERMGCPAGCPREM 239
Query: 478 QLLMKMCWSNAPSSRPSFKQI 498
LM +CW+ +RP F +
Sbjct: 240 YDLMNLCWTYDVENRPGFAAV 260
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 177 VLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ ++ AKISDFG + + N + V W APE I + S K D+W
Sbjct: 138 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 194
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 103/201 (51%), Gaps = 7/201 (3%)
Query: 303 LRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGM 362
+++L++P IV+ G+C +A + +VME GPL L+ V + + Q++ GM
Sbjct: 60 MQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGM 118
Query: 363 NYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPE 418
YL +HRDL + NVL+ ++ AKISDFG + + N + V W APE
Sbjct: 119 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 178
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
I + S K D+WS+G+++WE + + PY+ + S + + + P+ CP
Sbjct: 179 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGERMGCPAGCPREM 237
Query: 478 QLLMKMCWSNAPSSRPSFKQI 498
LM +CW+ +RP F +
Sbjct: 238 YDLMNLCWTYDVENRPGFAAV 258
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 177 VLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ ++ AKISDFG + + N + V W APE I + S K D+W
Sbjct: 136 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 192
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 103/201 (51%), Gaps = 7/201 (3%)
Query: 303 LRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGM 362
+++L++P IV+ G+C +A + +VME GPL L+ V + + Q++ GM
Sbjct: 80 MQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGM 138
Query: 363 NYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPE 418
YL +HRDL + NVL+ ++ AKISDFG + + N + V W APE
Sbjct: 139 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 198
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
I + S K D+WS+G+++WE + + PY+ + S + + + P+ CP
Sbjct: 199 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGERMGCPAGCPREM 257
Query: 478 QLLMKMCWSNAPSSRPSFKQI 498
LM +CW+ +RP F +
Sbjct: 258 YDLMNLCWTYDVENRPGFAAV 278
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 177 VLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ ++ AKISDFG + + N + V W APE I + S K D+W
Sbjct: 156 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 212
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 123/248 (49%), Gaps = 21/248 (8%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVK---KVREQKETDIRHLRK-------LNHPNIVKFKG 316
LG G G V+ + + I+A+K K + +K LR+ L HPNI++ G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLK 376
A +++EY G +Y L+ + QR + ++A ++Y HSK++IHRD+K
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 135
Query: 377 SPNVLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWS 433
N+L+GS E KI+DFG W+ S + + GT+ ++ PE+I +K+D+WS
Sbjct: 136 PENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWS 191
Query: 434 YGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRP 493
G++ +E L + P++ + S + P +G + L+ + PS RP
Sbjct: 192 LGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRP 249
Query: 494 SFKQILSH 501
+++L H
Sbjct: 250 MLREVLEH 257
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 177 VLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+GS E KI+DFG W+ S + + GT+ ++ PE+I +K+D+W
Sbjct: 139 LLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 234 LCF 236
LC+
Sbjct: 195 LCY 197
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 132/283 (46%), Gaps = 37/283 (13%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFSG-------KLRSEIVAVKKVRE-----QKETDIRH 302
+WE P + ++ + LG GA G V VAVK ++E + +
Sbjct: 21 KWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSE 80
Query: 303 LRKL----NHPNIVKFKGVCTQ--APCYCIVMEYCAYGPLYNLL--KDGEEVPPQRLYN- 353
L+ L +H N+V G CT+ P IV E+C +G L L K E VP + LY
Sbjct: 81 LKILIHIGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKDLYKD 139
Query: 354 ---------WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKST 404
++ Q+A GM +L S++ IHRDL + N+L+ K KI DFG R+
Sbjct: 140 FLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 199
Query: 405 KMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDVDSSAIIWGV 460
+ + WMAPE I + + + D+WS+G++LWE+ + +PY V
Sbjct: 200 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR 259
Query: 461 GSSSLHLPIPS-TCPDGFQLLMKMCWSNAPSSRPSFKQILSHL 502
+ P T P+ +Q ++ CW PS RP+F +++ HL
Sbjct: 260 LKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHL 301
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIW 229
+L+ K KI DFG R+ + + WMAPE I + + + D+W
Sbjct: 175 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVW 230
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 122/248 (49%), Gaps = 21/248 (8%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVK---KVREQKETDIRHLRK-------LNHPNIVKFKG 316
LG G G V+ + + I+A+K K + +K LR+ L HPNI++ G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLK 376
A +++EY G +Y L+ + QR + ++A ++Y HSK++IHRD+K
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 140
Query: 377 SPNVLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWS 433
N+L+GS E KI+DFG W+ S + + GT+ ++ PE I +K+D+WS
Sbjct: 141 PENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWS 196
Query: 434 YGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRP 493
G++ +E L + P++ + S + P +G + L+ + PS RP
Sbjct: 197 LGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRP 254
Query: 494 SFKQILSH 501
+++L H
Sbjct: 255 XLREVLEH 262
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 177 VLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+GS E KI+DFG W+ S + + GT+ ++ PE I +K+D+W
Sbjct: 144 LLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGV 199
Query: 234 LCF 236
LC+
Sbjct: 200 LCY 202
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 123/248 (49%), Gaps = 21/248 (8%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVK---KVREQKETDIRHLRK-------LNHPNIVKFKG 316
LG G G V+ + + I+A+K K + +K LR+ L HPNI++ G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLK 376
A +++EY G +Y L+ + QR + ++A ++Y HSK++IHRD+K
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 135
Query: 377 SPNVLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWS 433
N+L+GS E KI+DFG W+ S + + GT+ ++ PE+I +K+D+WS
Sbjct: 136 PENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 191
Query: 434 YGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRP 493
G++ +E L + P++ + S + P +G + L+ + PS RP
Sbjct: 192 LGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRP 249
Query: 494 SFKQILSH 501
+++L H
Sbjct: 250 MLREVLEH 257
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 177 VLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+GS E KI+DFG W+ S + + GT+ ++ PE+I +K+D+W
Sbjct: 139 LLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 234 LCF 236
LC+
Sbjct: 195 LCY 197
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 103/201 (51%), Gaps = 7/201 (3%)
Query: 303 LRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGM 362
+++L++P IV+ G+C +A + +VME GPL L+ V + + Q++ GM
Sbjct: 66 MQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGM 124
Query: 363 NYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPE 418
YL +HRDL + NVL+ ++ AKISDFG + + N + V W APE
Sbjct: 125 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 184
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
I + S K D+WS+G+++WE + + PY+ + S + + + P+ CP
Sbjct: 185 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGERMGCPAGCPREM 243
Query: 478 QLLMKMCWSNAPSSRPSFKQI 498
LM +CW+ +RP F +
Sbjct: 244 YDLMNLCWTYDVENRPGFAAV 264
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 177 VLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ ++ AKISDFG + + N + V W APE I + S K D+W
Sbjct: 142 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 198
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 123/248 (49%), Gaps = 21/248 (8%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVK---KVREQKETDIRHLRK-------LNHPNIVKFKG 316
LG G G V+ + + I+A+K K + +K LR+ L HPNI++ G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLK 376
A +++EY G +Y L+ + QR + ++A ++Y HSK++IHRD+K
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 140
Query: 377 SPNVLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWS 433
N+L+GS E KI+DFG W+ S + + GT+ ++ PE+I +K+D+WS
Sbjct: 141 PENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 196
Query: 434 YGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRP 493
G++ +E L + P++ + S + P +G + L+ + PS RP
Sbjct: 197 LGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRP 254
Query: 494 SFKQILSH 501
+++L H
Sbjct: 255 MLREVLEH 262
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 177 VLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+GS E KI+DFG W+ S + + GT+ ++ PE+I +K+D+W
Sbjct: 144 LLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 199
Query: 234 LCF 236
LC+
Sbjct: 200 LCY 202
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 132/285 (46%), Gaps = 39/285 (13%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFSG-------KLRSEIVAVKKVRE-----QKETDIRH 302
+WE P + + + LG GA G V VAVK ++E + +
Sbjct: 23 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSE 82
Query: 303 LRKL----NHPNIVKFKGVCTQ--APCYCIVMEYCAYGPLYNLL--KDGEEVP--PQRLY 352
L+ L +H N+V G CT+ P IV E+C +G L L K E VP P+ LY
Sbjct: 83 LKILIHIGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKPEDLY 141
Query: 353 N----------WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNK 402
++ Q+A GM +L S++ IHRDL + N+L+ K KI DFG R+
Sbjct: 142 KDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKD 201
Query: 403 STKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDVDSSAIIW 458
+ + WMAPE I + + + D+WS+G++LWE+ + +PY V
Sbjct: 202 PDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 261
Query: 459 GVGSSSLHLPIPS-TCPDGFQLLMKMCWSNAPSSRPSFKQILSHL 502
+ P T P+ +Q ++ CW PS RP+F +++ HL
Sbjct: 262 RRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHL 305
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIW 229
+L+ K KI DFG R+ + + WMAPE I + + + D+W
Sbjct: 179 ILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVW 234
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 123/248 (49%), Gaps = 21/248 (8%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVK---KVREQKETDIRHLRK-------LNHPNIVKFKG 316
LG G G V+ + + I+A+K K + +K LR+ L HPNI++ G
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLK 376
A +++EY G +Y L+ + QR + ++A ++Y HSK++IHRD+K
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 139
Query: 377 SPNVLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWS 433
N+L+GS E KI+DFG W+ S + + GT+ ++ PE+I +K+D+WS
Sbjct: 140 PENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 195
Query: 434 YGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRP 493
G++ +E L + P++ + S + P +G + L+ + PS RP
Sbjct: 196 LGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRP 253
Query: 494 SFKQILSH 501
+++L H
Sbjct: 254 MLREVLEH 261
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 177 VLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+GS E KI+DFG W+ S + + GT+ ++ PE+I +K+D+W
Sbjct: 143 LLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 198
Query: 234 LCF 236
LC+
Sbjct: 199 LCY 201
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 123/248 (49%), Gaps = 21/248 (8%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVK---KVREQKETDIRHLRK-------LNHPNIVKFKG 316
LG G G V+ + + I+A+K K + +K LR+ L HPNI++ G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLK 376
A +++EY G +Y L+ + QR + ++A ++Y HSK++IHRD+K
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 138
Query: 377 SPNVLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWS 433
N+L+GS E KI+DFG W+ S + + GT+ ++ PE+I +K+D+WS
Sbjct: 139 PENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWS 194
Query: 434 YGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRP 493
G++ +E L + P++ + S + P +G + L+ + PS RP
Sbjct: 195 LGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRP 252
Query: 494 SFKQILSH 501
+++L H
Sbjct: 253 MLREVLEH 260
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 177 VLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+GS E KI+DFG W+ S + + GT+ ++ PE+I +K+D+W
Sbjct: 142 LLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGV 197
Query: 234 LCF 236
LC+
Sbjct: 198 LCY 200
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 122/248 (49%), Gaps = 21/248 (8%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVK---KVREQKETDIRHLRK-------LNHPNIVKFKG 316
LG G G V+ + + I+A+K K + +K LR+ L HPNI++ G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLK 376
A +++EY G +Y L+ + QR + ++A ++Y HSK++IHRD+K
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 138
Query: 377 SPNVLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWS 433
N+L+GS E KI+DFG W+ S + GT+ ++ PE+I +K+D+WS
Sbjct: 139 PENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWS 194
Query: 434 YGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRP 493
G++ +E L + P++ + S + P +G + L+ + PS RP
Sbjct: 195 LGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRP 252
Query: 494 SFKQILSH 501
+++L H
Sbjct: 253 MLREVLEH 260
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 177 VLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+GS E KI+DFG W+ S + GT+ ++ PE+I +K+D+W
Sbjct: 142 LLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 197
Query: 234 LCF 236
LC+
Sbjct: 198 LCY 200
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 103/201 (51%), Gaps = 7/201 (3%)
Query: 303 LRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGM 362
+++L++P IV+ G+C +A + +VME GPL L+ V + + Q++ GM
Sbjct: 424 MQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGM 482
Query: 363 NYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPE 418
YL +HRDL + NVL+ ++ AKISDFG + + N + V W APE
Sbjct: 483 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 542
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
I + S K D+WS+G+++WE + + PY+ + S + + + P+ CP
Sbjct: 543 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGERMGCPAGCPREM 601
Query: 478 QLLMKMCWSNAPSSRPSFKQI 498
LM +CW+ +RP F +
Sbjct: 602 YDLMNLCWTYDVENRPGFAAV 622
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 177 VLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ ++ AKISDFG + + N + V W APE I + S K D+W
Sbjct: 500 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 556
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 122/248 (49%), Gaps = 21/248 (8%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVK---KVREQKETDIRHLRK-------LNHPNIVKFKG 316
LG G G V+ + + I+A+K K + +K LR+ L HPNI++ G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLK 376
A +++EY G +Y L+ + QR + ++A ++Y HSK++IHRD+K
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 135
Query: 377 SPNVLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWS 433
N+L+GS E KI+DFG W+ S + GT+ ++ PE+I +K+D+WS
Sbjct: 136 PENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWS 191
Query: 434 YGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRP 493
G++ +E L + P++ + S + P +G + L+ + PS RP
Sbjct: 192 LGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRP 249
Query: 494 SFKQILSH 501
+++L H
Sbjct: 250 MLREVLEH 257
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 177 VLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+GS E KI+DFG W+ S + GT+ ++ PE+I +K+D+W
Sbjct: 139 LLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 234 LCF 236
LC+
Sbjct: 195 LCY 197
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 103/201 (51%), Gaps = 7/201 (3%)
Query: 303 LRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGM 362
+++L++P IV+ G+C +A + +VME GPL L+ V + + Q++ GM
Sbjct: 425 MQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGM 483
Query: 363 NYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPE 418
YL +HRDL + NVL+ ++ AKISDFG + + N + V W APE
Sbjct: 484 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 543
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
I + S K D+WS+G+++WE + + PY+ + S + + + P+ CP
Sbjct: 544 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGERMGCPAGCPREM 602
Query: 478 QLLMKMCWSNAPSSRPSFKQI 498
LM +CW+ +RP F +
Sbjct: 603 YDLMNLCWTYDVENRPGFAAV 623
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 177 VLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ ++ AKISDFG + + N + V W APE I + S K D+W
Sbjct: 501 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 557
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 122/248 (49%), Gaps = 21/248 (8%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVK---KVREQKETDIRHLRK-------LNHPNIVKFKG 316
LG G G V+ + + I+A+K K + +K LR+ L HPNI++ G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLK 376
A +++EY G +Y L+ + QR + ++A ++Y HSK++IHRD+K
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 135
Query: 377 SPNVLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWS 433
N+L+GS E KI+DFG W+ S + GT+ ++ PE+I +K+D+WS
Sbjct: 136 PENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWS 191
Query: 434 YGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRP 493
G++ +E L + P++ + S + P +G + L+ + PS RP
Sbjct: 192 LGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRP 249
Query: 494 SFKQILSH 501
+++L H
Sbjct: 250 MLREVLEH 257
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 177 VLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+GS E KI+DFG W+ S + GT+ ++ PE+I +K+D+W
Sbjct: 139 LLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 234 LCF 236
LC+
Sbjct: 195 LCY 197
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 122/248 (49%), Gaps = 21/248 (8%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVK---KVREQKETDIRHLRK-------LNHPNIVKFKG 316
LG G G V+ + + I+A+K K + +K LR+ L HPNI++ G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLK 376
A +++EY G +Y L+ + QR + ++A ++Y HSK++IHRD+K
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 136
Query: 377 SPNVLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWS 433
N+L+GS E KI+DFG W+ S + GT+ ++ PE+I +K+D+WS
Sbjct: 137 PENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWS 192
Query: 434 YGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRP 493
G++ +E L + P++ + S + P +G + L+ + PS RP
Sbjct: 193 LGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRP 250
Query: 494 SFKQILSH 501
+++L H
Sbjct: 251 MLREVLEH 258
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 177 VLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+GS E KI+DFG W+ S + GT+ ++ PE+I +K+D+W
Sbjct: 140 LLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 195
Query: 234 LCF 236
LC+
Sbjct: 196 LCY 198
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 122/248 (49%), Gaps = 21/248 (8%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVK---KVREQKETDIRHLRK-------LNHPNIVKFKG 316
LG G G V+ + + I+A+K K + +K LR+ L HPNI++ G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLK 376
A +++EY G +Y L+ + QR + ++A ++Y HSK++IHRD+K
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 140
Query: 377 SPNVLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWS 433
N+L+GS E KI+DFG W+ S + GT+ ++ PE+I +K+D+WS
Sbjct: 141 PENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWS 196
Query: 434 YGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRP 493
G++ +E L + P++ + S + P +G + L+ + PS RP
Sbjct: 197 LGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRP 254
Query: 494 SFKQILSH 501
+++L H
Sbjct: 255 MLREVLEH 262
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 177 VLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+GS E KI+DFG W+ S + GT+ ++ PE+I +K+D+W
Sbjct: 144 LLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 199
Query: 234 LCF 236
LC+
Sbjct: 200 LCY 202
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 122/248 (49%), Gaps = 21/248 (8%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVK---KVREQKETDIRHLRK-------LNHPNIVKFKG 316
LG G G V+ + + I+A+K K + +K LR+ L HPNI++ G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLK 376
A +++EY G +Y L+ + QR + ++A ++Y HSK++IHRD+K
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 135
Query: 377 SPNVLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWS 433
N+L+GS E KI+DFG W+ S + GT+ ++ PE+I +K+D+WS
Sbjct: 136 PENLLLGSAGELKIADFG----WSVHAPSSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWS 191
Query: 434 YGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRP 493
G++ +E L + P++ + S + P +G + L+ + PS RP
Sbjct: 192 LGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRP 249
Query: 494 SFKQILSH 501
+++L H
Sbjct: 250 MLREVLEH 257
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 177 VLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+GS E KI+DFG W+ S + GT+ ++ PE+I +K+D+W
Sbjct: 139 LLLGSAGELKIADFG----WSVHAPSSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 234 LCF 236
LC+
Sbjct: 195 LCY 197
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 122/248 (49%), Gaps = 21/248 (8%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVK---KVREQKETDIRHLRK-------LNHPNIVKFKG 316
LG G G V+ + + I+A+K K + +K LR+ L HPNI++ G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLK 376
A +++EY G +Y L+ + QR + ++A ++Y HSK++IHRD+K
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 137
Query: 377 SPNVLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWS 433
N+L+GS E KI+DFG W+ S + GT+ ++ PE+I +K+D+WS
Sbjct: 138 PENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWS 193
Query: 434 YGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRP 493
G++ +E L + P++ + S + P +G + L+ + PS RP
Sbjct: 194 LGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRP 251
Query: 494 SFKQILSH 501
+++L H
Sbjct: 252 MLREVLEH 259
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 177 VLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+GS E KI+DFG W+ S + GT+ ++ PE+I +K+D+W
Sbjct: 141 LLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 196
Query: 234 LCF 236
LC+
Sbjct: 197 LCY 199
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 122/248 (49%), Gaps = 21/248 (8%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVK---KVREQKETDIRHLRK-------LNHPNIVKFKG 316
LG G G V+ + + I+A+K K + +K LR+ L HPNI++ G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLK 376
A +++EY G +Y L+ + QR + ++A ++Y HSK++IHRD+K
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 140
Query: 377 SPNVLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWS 433
N+L+GS E KI+DFG W+ S + GT+ ++ PE+I +K+D+WS
Sbjct: 141 PENLLLGSAGELKIADFG----WSVHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWS 196
Query: 434 YGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRP 493
G++ +E L + P++ + S + P +G + L+ + PS RP
Sbjct: 197 LGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRP 254
Query: 494 SFKQILSH 501
+++L H
Sbjct: 255 MLREVLEH 262
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 177 VLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+GS E KI+DFG W+ S + GT+ ++ PE+I +K+D+W
Sbjct: 144 LLLGSAGELKIADFG----WSVHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGV 199
Query: 234 LCF 236
LC+
Sbjct: 200 LCY 202
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 123/248 (49%), Gaps = 21/248 (8%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVK---KVREQKETDIRHLRK-------LNHPNIVKFKG 316
LG G G V+ + + I+A+K K + +K LR+ L HPNI++ G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLK 376
A +++EY G +Y L+ + QR + ++A ++Y HSK++IHRD+K
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 136
Query: 377 SPNVLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWS 433
N+L+GS E KI+DFG W+ S + + GT+ ++ PE+I +K+D+WS
Sbjct: 137 PENLLLGSAGELKIADFG----WSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWS 192
Query: 434 YGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRP 493
G++ +E L + P++ + S + P +G + L+ + PS RP
Sbjct: 193 LGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRP 250
Query: 494 SFKQILSH 501
+++L H
Sbjct: 251 MLREVLEH 258
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 177 VLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+GS E KI+DFG W+ S + + GT+ ++ PE+I +K+D+W
Sbjct: 140 LLLGSAGELKIADFG----WSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 195
Query: 234 LCF 236
LC+
Sbjct: 196 LCY 198
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 122/248 (49%), Gaps = 21/248 (8%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVK---KVREQKETDIRHLRK-------LNHPNIVKFKG 316
LG G G V+ + + I+A+K K + +K LR+ L HPNI++ G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLK 376
A +++EY G +Y L+ + QR + ++A ++Y HSK++IHRD+K
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 135
Query: 377 SPNVLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWS 433
N+L+GS E KI+DFG W+ S + GT+ ++ PE+I +K+D+WS
Sbjct: 136 PENLLLGSAGELKIADFG----WSVHAPSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWS 191
Query: 434 YGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRP 493
G++ +E L + P++ + S + P +G + L+ + PS RP
Sbjct: 192 LGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRP 249
Query: 494 SFKQILSH 501
+++L H
Sbjct: 250 MLREVLEH 257
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 177 VLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+GS E KI+DFG W+ S + GT+ ++ PE+I +K+D+W
Sbjct: 139 LLLGSAGELKIADFG----WSVHAPSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 234 LCF 236
LC+
Sbjct: 195 LCY 197
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 133/286 (46%), Gaps = 40/286 (13%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFSG-------KLRSEIVAVKKVRE-----QKETDIRH 302
+WE P + ++ + LG GA G V VAVK ++E + +
Sbjct: 22 KWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 81
Query: 303 LRKL----NHPNIVKFKGVCTQ--APCYCIVMEYCAYGPLYNLL--KDGEEVP---PQRL 351
L+ L +H N+V G CT+ P IV E+C +G L L K E VP P+ L
Sbjct: 82 LKILIHIGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKTPEDL 140
Query: 352 YN----------WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNN 401
Y ++ Q+A GM +L S++ IHRDL + N+L+ K KI DFG R+
Sbjct: 141 YKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXK 200
Query: 402 KSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDVDSSAII 457
+ + WMAPE I + + + D+WS+G++LWE+ + +PY V
Sbjct: 201 DPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 260
Query: 458 WGVGSSSLHLPIPS-TCPDGFQLLMKMCWSNAPSSRPSFKQILSHL 502
+ P T P+ +Q ++ CW PS RP+F +++ HL
Sbjct: 261 CRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHL 305
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 9/76 (11%)
Query: 159 FLAG--CTTPDALAESIGLGVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMA 213
FLA C D A +I L+ K KI DFG R+ + + WMA
Sbjct: 163 FLASRKCIHRDLAARNI----LLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMA 218
Query: 214 PEVIRNEQCSDKIDIW 229
PE I + + + D+W
Sbjct: 219 PETIFDRVYTIQSDVW 234
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 129/262 (49%), Gaps = 32/262 (12%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVKKV--------------REQKETDIRHLRKLNHPNIV 312
+G G G V G+L + +VA+K + ++ + ++ + LNHPNIV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 313 KFKGVCTQAPCYCIVMEYCAYGPLYN-LLKDGEEVPPQRLYNWARQIAAGMNYLHSKQ-- 369
K G+ P +VME+ G LY+ LL + IA G+ Y+ ++
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPP 144
Query: 370 IIHRDLKSPNVLIGSKEE-----AKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQ 424
I+HRDL+SPN+ + S +E AK++DFG ++ + + + G WMAPE I E+
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGL--LGNFQWMAPETIGAEE 202
Query: 425 CS--DKIDIWSYGIVLWELLTCETPYKDVDSSAI--IWGVGSSSLHLPIPSTCPDGFQLL 480
S +K D +S+ ++L+ +LT E P+ + I I + L IP CP + +
Sbjct: 203 ESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNV 262
Query: 481 MKMCWSNAPSSRPSFKQILSHL 502
+++CWS P RP F I+ L
Sbjct: 263 IELCWSGDPKKRPHFSYIVKEL 284
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 122/248 (49%), Gaps = 21/248 (8%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVK---KVREQKETDIRHLRK-------LNHPNIVKFKG 316
LG G G V+ + + I+A+K K + +K LR+ L HPNI++ G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLK 376
A +++EY G +Y L+ + QR + ++A ++Y HSK++IHRD+K
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 135
Query: 377 SPNVLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWS 433
N+L+GS E KI+DFG W+ S + GT+ ++ PE+I +K+D+WS
Sbjct: 136 PENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWS 191
Query: 434 YGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRP 493
G++ +E L + P++ + S + P +G + L+ + PS RP
Sbjct: 192 LGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRP 249
Query: 494 SFKQILSH 501
+++L H
Sbjct: 250 MLREVLEH 257
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 177 VLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+GS E KI+DFG W+ S + GT+ ++ PE+I +K+D+W
Sbjct: 139 LLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 234 LCF 236
LC+
Sbjct: 195 LCY 197
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 153/309 (49%), Gaps = 33/309 (10%)
Query: 259 PFESISDLQWLGSGAQGAVFSGK--LRSEIVAVKKV----REQKET------DIRHLRKL 306
P + SDL+ +G G+ GAV+ + SE+VA+KK+ ++ E ++R L+KL
Sbjct: 13 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL 72
Query: 307 NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLL----KDGEEVPPQRLYNWARQIAAGM 362
HPN ++++G + +VMEYC G +LL K +EV + + A Q G+
Sbjct: 73 RHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAAVTHGALQ---GL 128
Query: 363 NYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVI-- 420
YLHS +IHRD+K+ N+L+ K+ DFG+ + + F GT WMAPEVI
Sbjct: 129 AYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSA---SIMAPANXFVGTPYWMAPEVILA 185
Query: 421 -RNEQCSDKIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQL 479
Q K+D+WS GI EL + P ++++ + ++ + + + F+
Sbjct: 186 MDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRN 245
Query: 480 LMKMCWSNAPSSRPSFKQILSHLDIASQEVLRIQPEPYYKMQMIWKEEIRVHMLE-MQAN 538
+ C P RP+ + +L H + VLR +P P M +I + + V L+ +Q
Sbjct: 246 FVDSCLQKIPQDRPTSEVLLKH-----RFVLRERP-PTVIMDLIQRTKDAVRELDNLQYR 299
Query: 539 KSHVPKFEE 547
K F+E
Sbjct: 300 KMKKILFQE 308
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 6/63 (9%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVI---RNEQCSDKIDIWYKNR 233
+L+ K+ DFG+ + + F GT WMAPEVI Q K+D+W
Sbjct: 146 ILLSEPGLVKLGDFGSA---SIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 202
Query: 234 LCF 236
C
Sbjct: 203 TCI 205
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 124/248 (50%), Gaps = 21/248 (8%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVK---KVREQKETDIRHLRK-------LNHPNIVKFKG 316
LG G G V+ + ++ I+A+K K + +K LR+ L HPNI++ G
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLK 376
+ +++EY G +Y L+ + QR + ++A ++Y HSK++IHRD+K
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKKVIHRDIK 135
Query: 377 SPNVLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWS 433
N+L+GS E KI+DFG W+ S + + GT+ ++ PE+I +K+D+WS
Sbjct: 136 PENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWS 191
Query: 434 YGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRP 493
G++ +E L + P++ + S + P +G + L+ + PS RP
Sbjct: 192 LGVLCYEFLVGKPPFEANTYQDTYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRP 249
Query: 494 SFKQILSH 501
+++L H
Sbjct: 250 MLREVLEH 257
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 177 VLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+GS E KI+DFG W+ S + + GT+ ++ PE+I +K+D+W
Sbjct: 139 LLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 234 LCF 236
LC+
Sbjct: 195 LCY 197
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 123/248 (49%), Gaps = 21/248 (8%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVK---KVREQKETDIRHLRK-------LNHPNIVKFKG 316
LG G G V+ + + I+A+K K + +K LR+ L HPNI++ G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLK 376
A +++EY G +Y L+ + QR + ++A ++Y HSK++IHRD+K
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 137
Query: 377 SPNVLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWS 433
N+L+GS E KI++FG W+ S + + GT+ ++ PE+I +K+D+WS
Sbjct: 138 PENLLLGSAGELKIANFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 193
Query: 434 YGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRP 493
G++ +E L + P++ + S + P +G + L+ + PS RP
Sbjct: 194 LGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRP 251
Query: 494 SFKQILSH 501
+++L H
Sbjct: 252 MLREVLEH 259
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 177 VLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+GS E KI++FG W+ S + + GT+ ++ PE+I +K+D+W
Sbjct: 141 LLLGSAGELKIANFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 196
Query: 234 LCF 236
LC+
Sbjct: 197 LCY 199
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 122/248 (49%), Gaps = 21/248 (8%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVK---KVREQKETDIRHLRK-------LNHPNIVKFKG 316
LG G G V+ + + I+A+K K + +K LR+ L HPNI++ G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLK 376
A +++EY G +Y L+ + QR + ++A ++Y HSK++IHRD+K
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 161
Query: 377 SPNVLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWS 433
N+L+GS E KI+DFG W+ S + GT+ ++ PE+I +K+D+WS
Sbjct: 162 PENLLLGSAGELKIADFG----WSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWS 217
Query: 434 YGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRP 493
G++ +E L + P++ + S + P +G + L+ + PS RP
Sbjct: 218 LGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRP 275
Query: 494 SFKQILSH 501
+++L H
Sbjct: 276 MLREVLEH 283
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 177 VLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+GS E KI+DFG W+ S + GT+ ++ PE+I +K+D+W
Sbjct: 165 LLLGSAGELKIADFG----WSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 220
Query: 234 LCF 236
LC+
Sbjct: 221 LCY 223
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 132/287 (45%), Gaps = 41/287 (14%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFSG-------KLRSEIVAVKKVRE-----QKETDIRH 302
+WE P + + + LG GA G V VAVK ++E + +
Sbjct: 12 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 71
Query: 303 LRKL----NHPNIVKFKGVCTQ--APCYCIVMEYCAYGPLYNLL--KDGEEVP----PQR 350
L+ L +H N+V G CT+ P IV E+C +G L L K E VP P+
Sbjct: 72 LKILIHIGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPED 130
Query: 351 LYN----------WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWN 400
LY ++ Q+A GM +L S++ IHRDL + N+L+ K KI DFG R+
Sbjct: 131 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIX 190
Query: 401 NKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDVDSSAI 456
+ + WMAPE I + + + D+WS+G++LWE+ + +PY V
Sbjct: 191 KDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 250
Query: 457 IWGVGSSSLHLPIPS-TCPDGFQLLMKMCWSNAPSSRPSFKQILSHL 502
+ P T P+ +Q ++ CW PS RP+F +++ HL
Sbjct: 251 FCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHL 296
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 9/76 (11%)
Query: 159 FLAG--CTTPDALAESIGLGVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMA 213
FLA C D A +I L+ K KI DFG R+ + + WMA
Sbjct: 154 FLASRKCIHRDLAARNI----LLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMA 209
Query: 214 PEVIRNEQCSDKIDIW 229
PE I + + + D+W
Sbjct: 210 PETIFDRVYTIQSDVW 225
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 147/295 (49%), Gaps = 32/295 (10%)
Query: 259 PFESISDLQWLGSGAQGAVFSGK--LRSEIVAVKKV----REQKET------DIRHLRKL 306
P + SDL+ +G G+ GAV+ + SE+VA+KK+ ++ E ++R L+KL
Sbjct: 52 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL 111
Query: 307 NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLL----KDGEEVPPQRLYNWARQIAAGM 362
HPN ++++G + +VMEYC G +LL K +EV + + A Q G+
Sbjct: 112 RHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAAVTHGALQ---GL 167
Query: 363 NYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVI-- 420
YLHS +IHRD+K+ N+L+ K+ DFG+ + + F GT WMAPEVI
Sbjct: 168 AYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSA---SIMAPANXFVGTPYWMAPEVILA 224
Query: 421 -RNEQCSDKIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQL 479
Q K+D+WS GI EL + P ++++ + ++ + + + F+
Sbjct: 225 MDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRN 284
Query: 480 LMKMCWSNAPSSRPSFKQILSHLDIASQEVLRIQPEPYYKMQMIWKEEIRVHMLE 534
+ C P RP+ + +L H + VLR +P P M +I + + V L+
Sbjct: 285 FVDSCLQKIPQDRPTSEVLLKH-----RFVLRERP-PTVIMDLIQRTKDAVRELD 333
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 6/63 (9%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVI---RNEQCSDKIDIWYKNR 233
+L+ K+ DFG+ + + F GT WMAPEVI Q K+D+W
Sbjct: 185 ILLSEPGLVKLGDFGSA---SIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 241
Query: 234 LCF 236
C
Sbjct: 242 TCI 244
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 123/248 (49%), Gaps = 21/248 (8%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVK---KVREQKETDIRHLRK-------LNHPNIVKFKG 316
LG G G V+ + + I+A+K K + +K LR+ L HPNI++ G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLK 376
A +++EY G +Y L+ + QR + ++A ++Y HSK++IHRD+K
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 138
Query: 377 SPNVLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWS 433
N+L+GS E KI++FG W+ S + + GT+ ++ PE+I +K+D+WS
Sbjct: 139 PENLLLGSAGELKIANFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 194
Query: 434 YGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRP 493
G++ +E L + P++ + S + P +G + L+ + PS RP
Sbjct: 195 LGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRP 252
Query: 494 SFKQILSH 501
+++L H
Sbjct: 253 MLREVLEH 260
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 177 VLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+GS E KI++FG W+ S + + GT+ ++ PE+I +K+D+W
Sbjct: 142 LLLGSAGELKIANFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 197
Query: 234 LCF 236
LC+
Sbjct: 198 LCY 200
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 132/287 (45%), Gaps = 41/287 (14%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFSG-------KLRSEIVAVKKVRE-----QKETDIRH 302
+WE P + + + LG GA G V VAVK ++E + +
Sbjct: 21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 80
Query: 303 LRKL----NHPNIVKFKGVCTQ--APCYCIVMEYCAYGPLYNLL--KDGEEVP----PQR 350
L+ L +H N+V G CT+ P IV E+C +G L L K E VP P+
Sbjct: 81 LKILIHIGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPED 139
Query: 351 LYN----------WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWN 400
LY ++ Q+A GM +L S++ IHRDL + N+L+ K KI DFG R+
Sbjct: 140 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIX 199
Query: 401 NKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDVDSSAI 456
+ + WMAPE I + + + D+WS+G++LWE+ + +PY V
Sbjct: 200 KDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 259
Query: 457 IWGVGSSSLHLPIPS-TCPDGFQLLMKMCWSNAPSSRPSFKQILSHL 502
+ P T P+ +Q ++ CW PS RP+F +++ HL
Sbjct: 260 FCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHL 305
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 9/76 (11%)
Query: 159 FLAG--CTTPDALAESIGLGVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMA 213
FLA C D A +I L+ K KI DFG R+ + + WMA
Sbjct: 163 FLASRKCIHRDLAARNI----LLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMA 218
Query: 214 PEVIRNEQCSDKIDIW 229
PE I + + + D+W
Sbjct: 219 PETIFDRVYTIQSDVW 234
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 122/248 (49%), Gaps = 21/248 (8%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVK---KVREQKETDIRHLRK-------LNHPNIVKFKG 316
LG G G V+ + + I+A+K K + +K LR+ L HPNI++ G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLK 376
A +++EY G +Y L+ + QR + ++A ++Y HSK++IHRD+K
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 138
Query: 377 SPNVLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWS 433
N+L+GS E KI+DFG W+ S + GT+ ++ PE+I +K+D+WS
Sbjct: 139 PENLLLGSAGELKIADFG----WSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWS 194
Query: 434 YGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRP 493
G++ +E L + P++ + S + P +G + L+ + PS RP
Sbjct: 195 LGVLCYEFLVGKPPFEANTYQETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRP 252
Query: 494 SFKQILSH 501
+++L H
Sbjct: 253 MLREVLEH 260
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 177 VLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+GS E KI+DFG W+ S + GT+ ++ PE+I +K+D+W
Sbjct: 142 LLLGSAGELKIADFG----WSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 197
Query: 234 LCF 236
LC+
Sbjct: 198 LCY 200
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 132/287 (45%), Gaps = 41/287 (14%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFSG-------KLRSEIVAVKKVRE-----QKETDIRH 302
+WE P + + + LG GA G V VAVK ++E + +
Sbjct: 21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 80
Query: 303 LRKL----NHPNIVKFKGVCTQ--APCYCIVMEYCAYGPLYNLL--KDGEEVP----PQR 350
L+ L +H N+V G CT+ P IV E+C +G L L K E VP P+
Sbjct: 81 LKILIHIGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPED 139
Query: 351 LYN----------WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWN 400
LY ++ Q+A GM +L S++ IHRDL + N+L+ K KI DFG R+
Sbjct: 140 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 199
Query: 401 NKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDVDSSAI 456
+ + WMAPE I + + + D+WS+G++LWE+ + +PY V
Sbjct: 200 KDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 259
Query: 457 IWGVGSSSLHLPIPS-TCPDGFQLLMKMCWSNAPSSRPSFKQILSHL 502
+ P T P+ +Q ++ CW PS RP+F +++ HL
Sbjct: 260 FCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHL 305
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 9/76 (11%)
Query: 159 FLAG--CTTPDALAESIGLGVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMA 213
FLA C D A +I L+ K KI DFG R+ + + WMA
Sbjct: 163 FLASRKCIHRDLAARNI----LLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMA 218
Query: 214 PEVIRNEQCSDKIDIW 229
PE I + + + D+W
Sbjct: 219 PETIFDRVYTIQSDVW 234
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 131/286 (45%), Gaps = 39/286 (13%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFSG-------KLRSEIVAVKKVRE-----QKETDIRH 302
+WE P + + + LG GA G V VAVK ++E + +
Sbjct: 12 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 71
Query: 303 LRKL----NHPNIVKFKGVCTQ-APCYCIVMEYCAYGPLYNLL--KDGEEVP----PQRL 351
L+ L +H N+V G CT+ ++ E+C +G L L K E VP P+ L
Sbjct: 72 LKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 131
Query: 352 YN----------WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNN 401
Y ++ Q+A GM +L S++ IHRDL + N+L+ K KI DFG R+
Sbjct: 132 YKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXK 191
Query: 402 KSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDVDSSAII 457
+ + WMAPE I + + + D+WS+G++LWE+ + +PY V
Sbjct: 192 DPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 251
Query: 458 WGVGSSSLHLPIPS-TCPDGFQLLMKMCWSNAPSSRPSFKQILSHL 502
+ P T P+ +Q ++ CW PS RP+F +++ HL
Sbjct: 252 CRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHL 296
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 9/76 (11%)
Query: 159 FLAG--CTTPDALAESIGLGVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMA 213
FLA C D A +I L+ K KI DFG R+ + + WMA
Sbjct: 154 FLASRKCIHRDLAARNI----LLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMA 209
Query: 214 PEVIRNEQCSDKIDIW 229
PE I + + + D+W
Sbjct: 210 PETIFDRVYTIQSDVW 225
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 132/287 (45%), Gaps = 41/287 (14%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFSG-------KLRSEIVAVKKVRE-----QKETDIRH 302
+WE P + + + LG GA G V VAVK ++E + +
Sbjct: 58 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 117
Query: 303 LRKL----NHPNIVKFKGVCTQ--APCYCIVMEYCAYGPLYNLL--KDGEEVP----PQR 350
L+ L +H N+V G CT+ P IV E+C +G L L K E VP P+
Sbjct: 118 LKILIHIGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPED 176
Query: 351 LYN----------WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWN 400
LY ++ Q+A GM +L S++ IHRDL + N+L+ K KI DFG R+
Sbjct: 177 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 236
Query: 401 NKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDVDSSAI 456
+ + WMAPE I + + + D+WS+G++LWE+ + +PY V
Sbjct: 237 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 296
Query: 457 IWGVGSSSLHLPIPS-TCPDGFQLLMKMCWSNAPSSRPSFKQILSHL 502
+ P T P+ +Q ++ CW PS RP+F +++ HL
Sbjct: 297 FCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHL 342
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 9/76 (11%)
Query: 159 FLAG--CTTPDALAESIGLGVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMA 213
FLA C D A +I L+ K KI DFG R+ + + WMA
Sbjct: 200 FLASRKCIHRDLAARNI----LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 255
Query: 214 PEVIRNEQCSDKIDIW 229
PE I + + + D+W
Sbjct: 256 PETIFDRVYTIQSDVW 271
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 132/287 (45%), Gaps = 41/287 (14%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFSG-------KLRSEIVAVKKVRE-----QKETDIRH 302
+WE P + + + LG GA G V VAVK ++E + +
Sbjct: 21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 80
Query: 303 LRKL----NHPNIVKFKGVCTQ--APCYCIVMEYCAYGPLYNLL--KDGEEVP----PQR 350
L+ L +H N+V G CT+ P IV E+C +G L L K E VP P+
Sbjct: 81 LKILIHIGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPED 139
Query: 351 LYN----------WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWN 400
LY ++ Q+A GM +L S++ IHRDL + N+L+ K KI DFG R+
Sbjct: 140 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 199
Query: 401 NKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDVDSSAI 456
+ + WMAPE I + + + D+WS+G++LWE+ + +PY V
Sbjct: 200 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 259
Query: 457 IWGVGSSSLHLPIPS-TCPDGFQLLMKMCWSNAPSSRPSFKQILSHL 502
+ P T P+ +Q ++ CW PS RP+F +++ HL
Sbjct: 260 FCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHL 305
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 9/76 (11%)
Query: 159 FLAG--CTTPDALAESIGLGVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMA 213
FLA C D A +I L+ K KI DFG R+ + + WMA
Sbjct: 163 FLASRKCIHRDLAARNI----LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 218
Query: 214 PEVIRNEQCSDKIDIW 229
PE I + + + D+W
Sbjct: 219 PETIFDRVYTIQSDVW 234
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 126/253 (49%), Gaps = 10/253 (3%)
Query: 259 PFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQKE-----TDIRHLRKLNHPNI 311
P E L+ LG G+ G+V+ K +IVA+K+V + + +I +++ + P++
Sbjct: 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHV 86
Query: 312 VKFKGVCTQAPCYCIVMEYCAYGPLYNLLK-DGEEVPPQRLYNWARQIAAGMNYLHSKQI 370
VK+ G + IVMEYC G + ++++ + + + + G+ YLH +
Sbjct: 87 VKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK 146
Query: 371 IHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFA-GTVAWMAPEVIRNEQCSDKI 429
IHRD+K+ N+L+ ++ AK++DFG + + K + GT WMAPEVI+ +
Sbjct: 147 IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVA 206
Query: 430 DIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSS-SLHLPIPSTCPDGFQLLMKMCWSNA 488
DIWS GI E+ + PY D+ I+ + ++ P D F +K C +
Sbjct: 207 DIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKS 266
Query: 489 PSSRPSFKQILSH 501
P R + Q+L H
Sbjct: 267 PEQRATATQLLQH 279
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFA-GTVAWMAPEVIRNEQCSDKIDIW 229
+L+ ++ AK++DFG + + K + GT WMAPEVI+ + DIW
Sbjct: 156 ILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIW 209
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 132/287 (45%), Gaps = 41/287 (14%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFSG-------KLRSEIVAVKKVRE-----QKETDIRH 302
+WE P + + + LG GA G V VAVK ++E + +
Sbjct: 23 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 82
Query: 303 LRKL----NHPNIVKFKGVCTQ--APCYCIVMEYCAYGPLYNLL--KDGEEVP----PQR 350
L+ L +H N+V G CT+ P IV E+C +G L L K E VP P+
Sbjct: 83 LKILIHIGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKEAPED 141
Query: 351 LYN----------WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWN 400
LY ++ Q+A GM +L S++ IHRDL + N+L+ K KI DFG R+
Sbjct: 142 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 201
Query: 401 NKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDVDSSAI 456
+ + WMAPE I + + + D+WS+G++LWE+ + +PY V
Sbjct: 202 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 261
Query: 457 IWGVGSSSLHLPIPS-TCPDGFQLLMKMCWSNAPSSRPSFKQILSHL 502
+ P T P+ +Q ++ CW PS RP+F +++ HL
Sbjct: 262 FCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHL 307
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 9/76 (11%)
Query: 159 FLAG--CTTPDALAESIGLGVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMA 213
FLA C D A +I L+ K KI DFG R+ + + WMA
Sbjct: 165 FLASRKCIHRDLAARNI----LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 220
Query: 214 PEVIRNEQCSDKIDIW 229
PE I + + + D+W
Sbjct: 221 PETIFDRVYTIQSDVW 236
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 129/273 (47%), Gaps = 40/273 (14%)
Query: 269 LGSGAQGAV------FSGKLRSEIVAVKKVREQK-------ETDIRHLRKLNHPNIVKFK 315
LG G G+V G +VAVK+++ + +I+ L+ L+ IVK++
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 316 GVCTQA--PCYCIVMEYCAYGPLYNLL-KDGEEVPPQRLYNWARQIAAGMNYLHSKQIIH 372
GV P +VMEY G L + L + + RL ++ QI GM YL S++ +H
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVH 134
Query: 373 RDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDK 428
RDL + N+L+ S+ KI+DFG + + + + + W APE + + S +
Sbjct: 135 RDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQ 194
Query: 429 IDIWSYGIVLWELLT-----------------CETPYKDVDSSAIIWGVGSSSLHLPIPS 471
D+WS+G+VL+EL T CE +DV + + + LP P
Sbjct: 195 SDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCE---RDVPALCRLLELLEEGQRLPAPP 251
Query: 472 TCPDGFQLLMKMCWSNAPSSRPSFKQILSHLDI 504
CP LMK+CW+ +P RPSF + LD+
Sbjct: 252 ACPAEVHELMKLCWAPSPQDRPSFSALGPQLDM 284
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 121/246 (49%), Gaps = 33/246 (13%)
Query: 284 SEIVAVKKVRE----------QKETDIRHLRKLNHPNIVKFKGVCTQAPCYCI--VMEYC 331
E+VAVK ++ ++E DI LR L H +I+K+KG C A + VMEY
Sbjct: 60 GEMVAVKALKADAGPQHRSGWKQEIDI--LRTLYHEHIIKYKGCCEDAGAASLQLVMEYV 117
Query: 332 AYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKIS 391
G L + L + +L +A+QI GM YLH++ IHRDL + NVL+ + KI
Sbjct: 118 PLGSLRDYLPR-HSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIG 176
Query: 392 DFGTCREW--NNKSTKMSFAGT--VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLT-CET 446
DFG + ++ ++ G V W APE ++ + D+WS+G+ L+ELLT C++
Sbjct: 177 DFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDS 236
Query: 447 ----PYKDVDSSAIIWG---------VGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRP 493
P K ++ I G + LP P CP LMK CW S RP
Sbjct: 237 SQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRP 296
Query: 494 SFKQIL 499
+F+ ++
Sbjct: 297 TFENLI 302
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 131/286 (45%), Gaps = 39/286 (13%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFSG-------KLRSEIVAVKKVRE-----QKETDIRH 302
+WE P + + + LG GA G V VAVK ++E + +
Sbjct: 12 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 71
Query: 303 LRKL----NHPNIVKFKGVCTQ-APCYCIVMEYCAYGPLYNLL--KDGEEVP----PQRL 351
L+ L +H N+V G CT+ ++ E+C +G L L K E VP P+ L
Sbjct: 72 LKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 131
Query: 352 YN----------WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNN 401
Y ++ Q+A GM +L S++ IHRDL + N+L+ K KI DFG R+
Sbjct: 132 YKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 191
Query: 402 KSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDVDSSAII 457
+ + WMAPE I + + + D+WS+G++LWE+ + +PY V
Sbjct: 192 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 251
Query: 458 WGVGSSSLHLPIPS-TCPDGFQLLMKMCWSNAPSSRPSFKQILSHL 502
+ P T P+ +Q ++ CW PS RP+F +++ HL
Sbjct: 252 CRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHL 296
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 9/76 (11%)
Query: 159 FLAG--CTTPDALAESIGLGVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMA 213
FLA C D A +I L+ K KI DFG R+ + + WMA
Sbjct: 154 FLASRKCIHRDLAARNI----LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 209
Query: 214 PEVIRNEQCSDKIDIW 229
PE I + + + D+W
Sbjct: 210 PETIFDRVYTIQSDVW 225
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 131/266 (49%), Gaps = 35/266 (13%)
Query: 265 DLQWLGSGAQGAVFSGKLR--SEIVAVKKVR---EQKETDIRHLRKLNHPNIVKFKGVC- 318
+++ +GSG G VF K R + +K+V+ E+ E +++ L KL+H NIV + G C
Sbjct: 15 EIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNG-CW 73
Query: 319 ----------------TQAPCYCIVMEYCAYGPLYNLL--KDGEEVPPQRLYNWARQIAA 360
++ C I ME+C G L + + GE++ QI
Sbjct: 74 DGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITK 133
Query: 361 GMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVI 420
G++Y+HSK++I+RDLK N+ + ++ KI DFG N + GT+ +M+PE I
Sbjct: 134 GVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQI 193
Query: 421 RNEQCSDKIDIWSYGIVLWELL-TCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQ- 478
++ ++D+++ G++L ELL C+T + ++S + L I S D +
Sbjct: 194 SSQDYGKEVDLYALGLILAELLHVCDTAF---ETSKFF-----TDLRDGIISDIFDKKEK 245
Query: 479 LLMKMCWSNAPSSRPSFKQILSHLDI 504
L++ S P RP+ +IL L +
Sbjct: 246 TLLQKLLSKKPEDRPNTSEILRTLTV 271
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 13/53 (24%), Positives = 27/53 (50%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+ + ++ KI DFG N + GT+ +M+PE I ++ ++D++
Sbjct: 153 IFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLY 205
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 118/253 (46%), Gaps = 21/253 (8%)
Query: 269 LGSGAQGAVFSGKLRSE------IVAVKKVREQKETDIRH--------LRKLNHPNIVKF 314
LGSGA G V+ G + VA+K +RE + + P + +
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 315 KGVCTQAPCYCIVMEYCAYGPLYNLLKDGE-EVPPQRLYNWARQIAAGMNYLHSKQIIHR 373
G+C + +V + YG L + +++ + Q L NW QIA GM+YL +++HR
Sbjct: 85 LGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVRLVHR 143
Query: 374 DLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKID 430
DL + NVL+ S KI+DFG R + T+ G + WMA E I + + + D
Sbjct: 144 DLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSD 203
Query: 431 IWSYGIVLWELLTCET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAP 489
+WSYG+ +WEL+T PY + + I + LP P C ++M CW
Sbjct: 204 VWSYGVTVWELMTFGAKPYDGIPAREIP-DLLEKGERLPQPPICTIDVYMIMVKCWMIDS 262
Query: 490 SSRPSFKQILSHL 502
RP F++++S
Sbjct: 263 ECRPRFRELVSEF 275
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 38/93 (40%), Gaps = 12/93 (12%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIWYKNR 233
VL+ S KI+DFG R + T+ G + WMA E I + + + D+W
Sbjct: 150 VLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVW---- 205
Query: 234 LCFPTSLMARIGEFKSFVLRDEWEIPFESISDL 266
S + E +F + IP I DL
Sbjct: 206 -----SYGVTVWELMTFGAKPYDGIPAREIPDL 233
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 131/286 (45%), Gaps = 39/286 (13%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFSG-------KLRSEIVAVKKVRE-----QKETDIRH 302
+WE P + + + LG GA G V VAVK ++E + +
Sbjct: 12 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 71
Query: 303 LRKL----NHPNIVKFKGVCTQ-APCYCIVMEYCAYGPLYNLL--KDGEEVP----PQRL 351
L+ L +H N+V G CT+ ++ E+C +G L L K E VP P+ L
Sbjct: 72 LKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 131
Query: 352 YN----------WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNN 401
Y ++ Q+A GM +L S++ IHRDL + N+L+ K KI DFG R+
Sbjct: 132 YKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 191
Query: 402 KSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDVDSSAII 457
+ + WMAPE I + + + D+WS+G++LWE+ + +PY V
Sbjct: 192 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 251
Query: 458 WGVGSSSLHLPIPS-TCPDGFQLLMKMCWSNAPSSRPSFKQILSHL 502
+ P T P+ +Q ++ CW PS RP+F +++ HL
Sbjct: 252 CRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHL 296
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 9/76 (11%)
Query: 159 FLAG--CTTPDALAESIGLGVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMA 213
FLA C D A +I L+ K KI DFG R+ + + WMA
Sbjct: 154 FLASRKCIHRDLAARNI----LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 209
Query: 214 PEVIRNEQCSDKIDIW 229
PE I + + + D+W
Sbjct: 210 PETIFDRVYTIQSDVW 225
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 128/262 (48%), Gaps = 32/262 (12%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVKKV--------------REQKETDIRHLRKLNHPNIV 312
+G G G V G+L + +VA+K + ++ + ++ + LNHPNIV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 313 KFKGVCTQAPCYCIVMEYCAYGPLYN-LLKDGEEVPPQRLYNWARQIAAGMNYLHSKQ-- 369
K G+ P +VME+ G LY+ LL + IA G+ Y+ ++
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPP 144
Query: 370 IIHRDLKSPNVLIGSKEE-----AKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQ 424
I+HRDL+SPN+ + S +E AK++DF ++ + + + G WMAPE I E+
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGL--LGNFQWMAPETIGAEE 202
Query: 425 CS--DKIDIWSYGIVLWELLTCETPYKDVDSSAI--IWGVGSSSLHLPIPSTCPDGFQLL 480
S +K D +S+ ++L+ +LT E P+ + I I + L IP CP + +
Sbjct: 203 ESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNV 262
Query: 481 MKMCWSNAPSSRPSFKQILSHL 502
+++CWS P RP F I+ L
Sbjct: 263 IELCWSGDPKKRPHFSYIVKEL 284
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 137/280 (48%), Gaps = 31/280 (11%)
Query: 251 VLRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEIVAVKKVREQKETD---------IR 301
+ EW+IPFE + + +G G G V+ G+ E VA++ + +++ + +
Sbjct: 23 IFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGE-VAIRLIDIERDNEDQLKAFKREVM 81
Query: 302 HLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV-PPQRLYNWARQIAA 360
R+ H N+V F G C P I+ C LY++++D + V + A++I
Sbjct: 82 AYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVK 141
Query: 361 GMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGT-----CREWNNKSTKMSFA-GTVAW 414
GM YLH+K I+H+DLKS NV + + I+DFG + + K+ G +
Sbjct: 142 GMGYLHAKGILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCH 200
Query: 415 MAPEVIRN---EQCSDKI------DIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSL 465
+APE+IR + DK+ D+++ G + +EL E P+K + AIIW +G+
Sbjct: 201 LAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGM- 259
Query: 466 HLPIPSTCPDGFQL--LMKMCWSNAPSSRPSFKQILSHLD 503
P S G ++ ++ CW+ RP+F +++ L+
Sbjct: 260 -KPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLE 298
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 121/256 (47%), Gaps = 19/256 (7%)
Query: 269 LGSGAQGAVFSG-----KLRSEIVAVKKVREQKETDIRH--------LRKLNHPNIVKFK 315
LG G G V+ G K VAVK ++ D + ++ L+HP+IVK
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 316 GVCTQAPCYCIVMEYCAYGPLYNLL-KDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRD 374
G+ + P + I+ME YG L + L ++ + L ++ QI M YL S +HRD
Sbjct: 76 GIIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRD 134
Query: 375 LKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAG--TVAWMAPEVIRNEQCSDKIDIW 432
+ N+L+ S E K+ DFG R ++ + + WM+PE I + + D+W
Sbjct: 135 IAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVW 194
Query: 433 SYGIVLWELLTC-ETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSS 491
+ + +WE+L+ + P+ +++ +I GV LP P CP LM CW PS
Sbjct: 195 MFAVCMWEILSFGKQPFFWLENKDVI-GVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSD 253
Query: 492 RPSFKQILSHLDIASQ 507
RP F +++ L Q
Sbjct: 254 RPRFTELVCSLSDVYQ 269
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 176 GVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT--VAWMAPEVIRNEQCSDKIDIW 229
+L+ S E K+ DFG R ++ + + WM+PE I + + D+W
Sbjct: 139 NILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVW 194
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 122/257 (47%), Gaps = 28/257 (10%)
Query: 269 LGSGAQGAVFSGKLR--SEIVAVKK-VREQKET------DIRHLRKLNHPNIVKFKGVCT 319
LG G G R E++ +K+ +R +ET +++ +R L HPN++KF GV
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 320 QAPCYCIVMEYCAYGPLYNLLKDGEEVPP--QRLYNWARQIAAGMNYLHSKQIIHRDLKS 377
+ + EY G L ++K + P QR+ ++A+ IA+GM YLHS IIHRDL S
Sbjct: 78 KDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRV-SFAKDIASGMAYLHSMNIIHRDLNS 136
Query: 378 PNVLIGSKEEAKISDFGTCREWNNKST---------------KMSFAGTVAWMAPEVIRN 422
N L+ + ++DFG R ++ T + + G WMAPE+I
Sbjct: 137 HNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMING 196
Query: 423 EQCSDKIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSS-LHLPIPSTCPDGFQLLM 481
+K+D++S+GIVL E++ D + +G+ L P CP F +
Sbjct: 197 RSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPIT 256
Query: 482 KMCWSNAPSSRPSFKQI 498
C P RPSF ++
Sbjct: 257 VRCCDLDPEKRPSFVKL 273
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 121/256 (47%), Gaps = 19/256 (7%)
Query: 269 LGSGAQGAVFSG-----KLRSEIVAVKKVREQKETDIRH--------LRKLNHPNIVKFK 315
LG G G V+ G K VAVK ++ D + ++ L+HP+IVK
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 316 GVCTQAPCYCIVMEYCAYGPLYNLL-KDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRD 374
G+ + P + I+ME YG L + L ++ + L ++ QI M YL S +HRD
Sbjct: 80 GIIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRD 138
Query: 375 LKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAG--TVAWMAPEVIRNEQCSDKIDIW 432
+ N+L+ S E K+ DFG R ++ + + WM+PE I + + D+W
Sbjct: 139 IAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVW 198
Query: 433 SYGIVLWELLTC-ETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSS 491
+ + +WE+L+ + P+ +++ +I GV LP P CP LM CW PS
Sbjct: 199 MFAVCMWEILSFGKQPFFWLENKDVI-GVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSD 257
Query: 492 RPSFKQILSHLDIASQ 507
RP F +++ L Q
Sbjct: 258 RPRFTELVCSLSDVYQ 273
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGT--VAWMAPEVIRNEQCSDKIDIW 229
+L+ S E K+ DFG R ++ + + WM+PE I + + D+W
Sbjct: 144 ILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVW 198
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 121/256 (47%), Gaps = 19/256 (7%)
Query: 269 LGSGAQGAVFSG-----KLRSEIVAVKKVREQKETDIRH--------LRKLNHPNIVKFK 315
LG G G V+ G K VAVK ++ D + ++ L+HP+IVK
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 316 GVCTQAPCYCIVMEYCAYGPLYNLL-KDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRD 374
G+ + P + I+ME YG L + L ++ + L ++ QI M YL S +HRD
Sbjct: 92 GIIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRD 150
Query: 375 LKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAG--TVAWMAPEVIRNEQCSDKIDIW 432
+ N+L+ S E K+ DFG R ++ + + WM+PE I + + D+W
Sbjct: 151 IAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVW 210
Query: 433 SYGIVLWELLTC-ETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSS 491
+ + +WE+L+ + P+ +++ +I GV LP P CP LM CW PS
Sbjct: 211 MFAVCMWEILSFGKQPFFWLENKDVI-GVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSD 269
Query: 492 RPSFKQILSHLDIASQ 507
RP F +++ L Q
Sbjct: 270 RPRFTELVCSLSDVYQ 285
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAG--TVAWMAPEVIRNEQCSDKIDIW 229
+L+ S E K+ DFG R ++ + + WM+PE I + + D+W
Sbjct: 156 ILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVW 210
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 125/257 (48%), Gaps = 36/257 (14%)
Query: 280 GKLRSEIVAVKKVREQK-------ETDIRHLRKLNHPNIVKFKGVCTQAP---CYCIVME 329
G +VAVK+++ + +I+ L+ L+ IVK++GV + P +VME
Sbjct: 48 GDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGV-SYGPGRQSLRLVME 106
Query: 330 YCAYGPLYNLL-KDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEA 388
Y G L + L + + RL ++ QI GM YL S++ +HRDL + N+L+ S+
Sbjct: 107 YLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHV 166
Query: 389 KISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLT- 443
KI+DFG + + + + + W APE + + S + D+WS+G+VL+EL T
Sbjct: 167 KIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTY 226
Query: 444 ----------------CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSN 487
CE +DV + + + + LP P CP LMK+CW+
Sbjct: 227 CDKSCSPSAEFLRMMGCE---RDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAP 283
Query: 488 APSSRPSFKQILSHLDI 504
+P RPSF + LD+
Sbjct: 284 SPQDRPSFSALGPQLDM 300
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 127/254 (50%), Gaps = 30/254 (11%)
Query: 280 GKLRSEIVAVKKVREQK-------ETDIRHLRKLNHPNIVKFKGVCTQAP---CYCIVME 329
G +VAVK+++ + +I+ L+ L+ IVK++GV + P +VME
Sbjct: 35 GDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGV-SYGPGRQSLRLVME 93
Query: 330 YCAYGPLYNLL-KDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEA 388
Y G L + L + + RL ++ QI GM YL S++ +HRDL + N+L+ S+
Sbjct: 94 YLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHV 153
Query: 389 KISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLT- 443
KI+DFG + + + + + W APE + + S + D+WS+G+VL+EL T
Sbjct: 154 KIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTY 213
Query: 444 CE---TPY----------KDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPS 490
C+ +P +DV + + + + LP P CP LMK+CW+ +P
Sbjct: 214 CDKSCSPSAEFLRMMGSERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQ 273
Query: 491 SRPSFKQILSHLDI 504
RPSF + LD+
Sbjct: 274 DRPSFSALGPQLDM 287
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 124/257 (48%), Gaps = 36/257 (14%)
Query: 280 GKLRSEIVAVKKVREQK-------ETDIRHLRKLNHPNIVKFKGVCTQAP---CYCIVME 329
G +VAVK+++ + +I+ L+ L+ IVK++GV + P +VME
Sbjct: 36 GDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGV-SYGPGRQSLRLVME 94
Query: 330 YCAYGPLYNLL-KDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEA 388
Y G L + L + + RL ++ QI GM YL S++ +HRDL + N+L+ S+
Sbjct: 95 YLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHV 154
Query: 389 KISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLT- 443
KI+DFG + + + + + W APE + + S + D+WS+G+VL+EL T
Sbjct: 155 KIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTY 214
Query: 444 ----------------CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSN 487
CE +DV + + + LP P CP LMK+CW+
Sbjct: 215 CDKSCSPSAEFLRMMGCE---RDVPALCRLLELLEEGQRLPAPPACPAEVHELMKLCWAP 271
Query: 488 APSSRPSFKQILSHLDI 504
+P RPSF + LD+
Sbjct: 272 SPQDRPSFSALGPQLDM 288
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 125/265 (47%), Gaps = 24/265 (9%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSGKLR-SEIVAVKKVREQKE--------TDIRHLR 304
D WEI E LG GA G V+ + + + ++A KV + K +I L
Sbjct: 37 DFWEIIGE-------LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILA 89
Query: 305 KLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE-VPPQRLYNWARQIAAGMN 363
+HPNIVK I++E+CA G + ++ + E + ++ +Q +N
Sbjct: 90 SCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALN 149
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFG-TCREWNNKSTKMSFAGTVAWMAPEVIRN 422
YLH +IIHRDLK+ N+L + K++DFG + + + SF GT WMAPEV+
Sbjct: 150 YLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMC 209
Query: 423 EQCSD-----KIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSS-LHLPIPSTCPDG 476
E D K D+WS GI L E+ E P+ +++ ++ + S L PS
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSN 269
Query: 477 FQLLMKMCWSNAPSSRPSFKQILSH 501
F+ +K C +R + Q+L H
Sbjct: 270 FKDFLKKCLEKNVDARWTTSQLLQH 294
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
Query: 176 GVLIGSKEEAKISDFG-TCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSD-----KIDIW 229
+L + K++DFG + + + SF GT WMAPEV+ E D K D+W
Sbjct: 165 NILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVW 224
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 126/254 (49%), Gaps = 12/254 (4%)
Query: 259 PFESISDLQWLGSGAQGAVFSGK--LRSEIVAVKKVREQKE-------TDIRHLRKLNHP 309
P + + + +G GA G V++ + VA++++ Q++ +I +R+ +P
Sbjct: 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNP 77
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQ 369
NIV + +VMEY A G L +++ + + ++ R+ + +LHS Q
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQ 136
Query: 370 IIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMS-FAGTVAWMAPEVIRNEQCSDK 428
+IHRD+KS N+L+G K++DFG C + + +K S GT WMAPEV+ + K
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPK 196
Query: 429 IDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSL-HLPIPSTCPDGFQLLMKMCWSN 487
+DIWS GI+ E++ E PY + + ++ + ++ L P F+ + C
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDM 256
Query: 488 APSSRPSFKQILSH 501
R S K++L H
Sbjct: 257 DVEKRGSAKELLQH 270
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMS-FAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+G K++DFG C + + +K S GT WMAPEV+ + K+DIW
Sbjct: 147 ILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIW 200
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 126/254 (49%), Gaps = 12/254 (4%)
Query: 259 PFESISDLQWLGSGAQGAVFSGK--LRSEIVAVKKVREQKE-------TDIRHLRKLNHP 309
P + + + +G GA G V++ + VA++++ Q++ +I +R+ +P
Sbjct: 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNP 77
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQ 369
NIV + +VMEY A G L +++ + + ++ R+ + +LHS Q
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQ 136
Query: 370 IIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMS-FAGTVAWMAPEVIRNEQCSDK 428
+IHRD+KS N+L+G K++DFG C + + +K S GT WMAPEV+ + K
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPK 196
Query: 429 IDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSL-HLPIPSTCPDGFQLLMKMCWSN 487
+DIWS GI+ E++ E PY + + ++ + ++ L P F+ + C
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEM 256
Query: 488 APSSRPSFKQILSH 501
R S K++L H
Sbjct: 257 DVEKRGSAKELLQH 270
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMS-FAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+G K++DFG C + + +K S GT WMAPEV+ + K+DIW
Sbjct: 147 ILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIW 200
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 129/279 (46%), Gaps = 48/279 (17%)
Query: 265 DLQWLGSGAQGAVFSGKLRSE-----IVAVKKVREQKETDIRHLRKLNHPNIVKFKGVC- 318
+++ +GSG G VF K R + I VK E+ E +++ L KL+H NIV + G C
Sbjct: 16 EIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNIVHYNG-CW 74
Query: 319 -----------------------------TQAPCYCIVMEYCAYGPLYNLL--KDGEEVP 347
++ C I ME+C G L + + GE++
Sbjct: 75 DGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLD 134
Query: 348 PQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMS 407
QI G++Y+HSK++IHRDLK N+ + ++ KI DFG N +
Sbjct: 135 KVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTR 194
Query: 408 FAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELL-TCETPYKDVDSSAIIWGVGSSSLH 466
GT+ +M+PE I ++ ++D+++ G++L ELL C+T + ++S + L
Sbjct: 195 SKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAF---ETSKFF-----TDLR 246
Query: 467 LPIPSTCPDGFQ-LLMKMCWSNAPSSRPSFKQILSHLDI 504
I S D + L++ S P RP+ +IL L +
Sbjct: 247 DGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTV 285
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/53 (24%), Positives = 27/53 (50%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+ + ++ KI DFG N + GT+ +M+PE I ++ ++D++
Sbjct: 167 IFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLY 219
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 126/254 (49%), Gaps = 12/254 (4%)
Query: 259 PFESISDLQWLGSGAQGAVFSGK--LRSEIVAVKKVREQKE-------TDIRHLRKLNHP 309
P + + + +G GA G V++ + VA++++ Q++ +I +R+ +P
Sbjct: 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNP 77
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQ 369
NIV + +VMEY A G L +++ + + ++ R+ + +LHS Q
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQ 136
Query: 370 IIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMS-FAGTVAWMAPEVIRNEQCSDK 428
+IHRD+KS N+L+G K++DFG C + + +K S GT WMAPEV+ + K
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPK 196
Query: 429 IDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSL-HLPIPSTCPDGFQLLMKMCWSN 487
+DIWS GI+ E++ E PY + + ++ + ++ L P F+ + C
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDM 256
Query: 488 APSSRPSFKQILSH 501
R S K++L H
Sbjct: 257 DVEKRGSAKELLQH 270
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMS-FAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+G K++DFG C + + +K S GT WMAPEV+ + K+DIW
Sbjct: 147 ILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIW 200
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 125/265 (47%), Gaps = 24/265 (9%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSGKLR-SEIVAVKKVREQKE--------TDIRHLR 304
D WEI E LG GA G V+ + + + ++A KV + K +I L
Sbjct: 37 DFWEIIGE-------LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILA 89
Query: 305 KLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE-VPPQRLYNWARQIAAGMN 363
+HPNIVK I++E+CA G + ++ + E + ++ +Q +N
Sbjct: 90 SCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALN 149
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFG-TCREWNNKSTKMSFAGTVAWMAPEVIRN 422
YLH +IIHRDLK+ N+L + K++DFG + + + SF GT WMAPEV+
Sbjct: 150 YLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMC 209
Query: 423 EQCSD-----KIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSS-LHLPIPSTCPDG 476
E D K D+WS GI L E+ E P+ +++ ++ + S L PS
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSN 269
Query: 477 FQLLMKMCWSNAPSSRPSFKQILSH 501
F+ +K C +R + Q+L H
Sbjct: 270 FKDFLKKCLEKNVDARWTTSQLLQH 294
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
Query: 176 GVLIGSKEEAKISDFG-TCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSD-----KIDIW 229
+L + K++DFG + + + SF GT WMAPEV+ E D K D+W
Sbjct: 165 NILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVW 224
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 124/244 (50%), Gaps = 21/244 (8%)
Query: 266 LQWLGSGAQGAVF-----SGKLRSEIVAVK-----------KVREQKETDIRHLRKLNHP 309
L+ LG G+ G VF SG ++ A+K +VR + E DI L ++NHP
Sbjct: 29 LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI--LVEVNHP 86
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQ 369
IVK +++++ G L+ L + + + ++A +++LHS
Sbjct: 87 FIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG 146
Query: 370 IIHRDLKSPNVLIGSKEEAKISDFGTCRE-WNNKSTKMSFAGTVAWMAPEVIRNEQCSDK 428
II+RDLK N+L+ + K++DFG +E +++ SF GTV +MAPEV+ +
Sbjct: 147 IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQS 206
Query: 429 IDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNA 488
D WS+G++++E+LT P++ D + + + L +P P+ Q L++M +
Sbjct: 207 ADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP-QFLSPEA-QSLLRMLFKRN 264
Query: 489 PSSR 492
P++R
Sbjct: 265 PANR 268
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 177 VLIGSKEEAKISDFGTCRE-WNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNRLC 235
+L+ + K++DFG +E +++ SF GTV +MAPEV+ + D W L
Sbjct: 157 ILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLM 216
Query: 236 F 236
F
Sbjct: 217 F 217
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 120/226 (53%), Gaps = 25/226 (11%)
Query: 244 IGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKLR-SEIVAVKKVREQK------ 296
+G+ K F LR E ++ ++ S+ LG G G V+ G+L +VAVK+++E++
Sbjct: 22 LGQLKRFSLR-ELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGEL 80
Query: 297 --ETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPP------ 348
+T++ + H N+++ +G C +V Y A G + + L++ E P
Sbjct: 81 QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPK 140
Query: 349 -QRLYNWARQIAAGMNYLHSK---QIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNK 402
QR+ A A G+ YLH +IIHRD+K+ N+L+ + EA + DFG + ++ +
Sbjct: 141 RQRI---ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDX 197
Query: 403 STKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
+ GT+ +APE + + S+K D++ YG++L EL+T + +
Sbjct: 198 HVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 243
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ + EA + DFG + ++ + + GT+ +APE + + S+K D++
Sbjct: 173 ILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVF 227
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 124/244 (50%), Gaps = 21/244 (8%)
Query: 266 LQWLGSGAQGAVF-----SGKLRSEIVAVK-----------KVREQKETDIRHLRKLNHP 309
L+ LG G+ G VF SG ++ A+K +VR + E DI L ++NHP
Sbjct: 29 LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI--LVEVNHP 86
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQ 369
IVK +++++ G L+ L + + + ++A +++LHS
Sbjct: 87 FIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG 146
Query: 370 IIHRDLKSPNVLIGSKEEAKISDFGTCRE-WNNKSTKMSFAGTVAWMAPEVIRNEQCSDK 428
II+RDLK N+L+ + K++DFG +E +++ SF GTV +MAPEV+ +
Sbjct: 147 IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQS 206
Query: 429 IDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNA 488
D WS+G++++E+LT P++ D + + + L +P P+ Q L++M +
Sbjct: 207 ADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP-QFLSPEA-QSLLRMLFKRN 264
Query: 489 PSSR 492
P++R
Sbjct: 265 PANR 268
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 177 VLIGSKEEAKISDFGTCRE-WNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNRLC 235
+L+ + K++DFG +E +++ SF GTV +MAPEV+ + D W L
Sbjct: 157 ILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLM 216
Query: 236 F 236
F
Sbjct: 217 F 217
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 126/254 (49%), Gaps = 12/254 (4%)
Query: 259 PFESISDLQWLGSGAQGAVFSGK--LRSEIVAVKKVREQKE-------TDIRHLRKLNHP 309
P + + + +G GA G V++ + VA++++ Q++ +I +R+ +P
Sbjct: 19 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNP 78
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQ 369
NIV + +VMEY A G L +++ + + ++ R+ + +LHS Q
Sbjct: 79 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQ 137
Query: 370 IIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMS-FAGTVAWMAPEVIRNEQCSDK 428
+IHRD+KS N+L+G K++DFG C + + +K S GT WMAPEV+ + K
Sbjct: 138 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPK 197
Query: 429 IDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSL-HLPIPSTCPDGFQLLMKMCWSN 487
+DIWS GI+ E++ E PY + + ++ + ++ L P F+ + C
Sbjct: 198 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEM 257
Query: 488 APSSRPSFKQILSH 501
R S K+++ H
Sbjct: 258 DVEKRGSAKELIQH 271
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMS-FAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+G K++DFG C + + +K S GT WMAPEV+ + K+DIW
Sbjct: 148 ILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIW 201
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 119/248 (47%), Gaps = 21/248 (8%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVK---KVREQKETDIRHLRK-------LNHPNIVKFKG 316
LG G G V+ + R I+A+K K + +K LR+ L HPNI++ G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLK 376
A +++EY G +Y L+ QR + ++A ++Y HSK++IHRD+K
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRDIK 139
Query: 377 SPNVLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWS 433
N+L+GS E KI+DFG W+ S + + GT+ ++ PE+I +K+D+WS
Sbjct: 140 PENLLLGSNGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 195
Query: 434 YGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRP 493
G++ +E L P++ + S + P +G + L+ + S R
Sbjct: 196 LGVLCYEFLVGMPPFEAHTYQETYRRI--SRVEFTFPDFVTEGARDLISRLLKHNASQRL 253
Query: 494 SFKQILSH 501
+ ++L H
Sbjct: 254 TLAEVLEH 261
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 177 VLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+GS E KI+DFG W+ S + + GT+ ++ PE+I +K+D+W
Sbjct: 143 LLLGSNGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 198
Query: 234 LCF 236
LC+
Sbjct: 199 LCY 201
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 99/192 (51%), Gaps = 18/192 (9%)
Query: 269 LGSGAQGAVFSGKLRSEIVAVKKV-----------REQKETDIRHLRKLNHPNIVKFKGV 317
+G G G V+ G + + VAVKK+ ++Q + +I+ + K H N+V+ G
Sbjct: 39 MGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGF 98
Query: 318 CTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLY---NWARQIAAGMNYLHSKQIIHRD 374
+ C+V Y G L + L + PP + A+ A G+N+LH IHRD
Sbjct: 99 SSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRD 158
Query: 375 LKSPNVLIGSKEEAKISDFGTCR---EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDI 431
+KS N+L+ AKISDFG R ++ GT A+MAPE +R E + K DI
Sbjct: 159 IKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRGE-ITPKSDI 217
Query: 432 WSYGIVLWELLT 443
+S+G+VL E++T
Sbjct: 218 YSFGVVLLEIIT 229
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 177 VLIGSKEEAKISDFGTCR---EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ AKISDFG R ++ GT A+MAPE +R E + K DI+
Sbjct: 164 ILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRGE-ITPKSDIY 218
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 124/244 (50%), Gaps = 21/244 (8%)
Query: 266 LQWLGSGAQGAVF-----SGKLRSEIVAVK-----------KVREQKETDIRHLRKLNHP 309
L+ LG G+ G VF SG ++ A+K +VR + E DI L ++NHP
Sbjct: 30 LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI--LVEVNHP 87
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQ 369
IVK +++++ G L+ L + + + ++A +++LHS
Sbjct: 88 FIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG 147
Query: 370 IIHRDLKSPNVLIGSKEEAKISDFGTCRE-WNNKSTKMSFAGTVAWMAPEVIRNEQCSDK 428
II+RDLK N+L+ + K++DFG +E +++ SF GTV +MAPEV+ +
Sbjct: 148 IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQS 207
Query: 429 IDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNA 488
D WS+G++++E+LT P++ D + + + L +P P+ Q L++M +
Sbjct: 208 ADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP-QFLSPEA-QSLLRMLFKRN 265
Query: 489 PSSR 492
P++R
Sbjct: 266 PANR 269
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 177 VLIGSKEEAKISDFGTCRE-WNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNRLC 235
+L+ + K++DFG +E +++ SF GTV +MAPEV+ + D W L
Sbjct: 158 ILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLM 217
Query: 236 F 236
F
Sbjct: 218 F 218
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 99/192 (51%), Gaps = 18/192 (9%)
Query: 269 LGSGAQGAVFSGKLRSEIVAVKKV-----------REQKETDIRHLRKLNHPNIVKFKGV 317
+G G G V+ G + + VAVKK+ ++Q + +I+ + K H N+V+ G
Sbjct: 33 MGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGF 92
Query: 318 CTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLY---NWARQIAAGMNYLHSKQIIHRD 374
+ C+V Y G L + L + PP + A+ A G+N+LH IHRD
Sbjct: 93 SSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRD 152
Query: 375 LKSPNVLIGSKEEAKISDFGTCR---EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDI 431
+KS N+L+ AKISDFG R ++ GT A+MAPE +R E + K DI
Sbjct: 153 IKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRGE-ITPKSDI 211
Query: 432 WSYGIVLWELLT 443
+S+G+VL E++T
Sbjct: 212 YSFGVVLLEIIT 223
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 177 VLIGSKEEAKISDFGTCR---EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ AKISDFG R ++ GT A+MAPE +R E + K DI+
Sbjct: 158 ILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRGE-ITPKSDIY 212
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 99/192 (51%), Gaps = 18/192 (9%)
Query: 269 LGSGAQGAVFSGKLRSEIVAVKKV-----------REQKETDIRHLRKLNHPNIVKFKGV 317
+G G G V+ G + + VAVKK+ ++Q + +I+ + K H N+V+ G
Sbjct: 39 MGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGF 98
Query: 318 CTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLY---NWARQIAAGMNYLHSKQIIHRD 374
+ C+V Y G L + L + PP + A+ A G+N+LH IHRD
Sbjct: 99 SSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRD 158
Query: 375 LKSPNVLIGSKEEAKISDFGTCR---EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDI 431
+KS N+L+ AKISDFG R ++ GT A+MAPE +R E + K DI
Sbjct: 159 IKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRGE-ITPKSDI 217
Query: 432 WSYGIVLWELLT 443
+S+G+VL E++T
Sbjct: 218 YSFGVVLLEIIT 229
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 177 VLIGSKEEAKISDFGTCR---EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ AKISDFG R ++ GT A+MAPE +R E + K DI+
Sbjct: 164 ILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRGE-ITPKSDIY 218
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 120/244 (49%), Gaps = 21/244 (8%)
Query: 266 LQWLGSGAQGAVF---------SGKLRSEIVAVK-------KVREQKETDIRHLRKLNHP 309
L+ LG G+ G VF SG L + V K +VR + E DI L +NHP
Sbjct: 33 LKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDI--LADVNHP 90
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQ 369
+VK +++++ G L+ L + + + ++A G+++LHS
Sbjct: 91 FVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLG 150
Query: 370 IIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKM-SFAGTVAWMAPEVIRNEQCSDK 428
II+RDLK N+L+ + K++DFG +E + K SF GTV +MAPEV+ + S
Sbjct: 151 IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHS 210
Query: 429 IDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNA 488
D WSYG++++E+LT P++ D + + + L + P Q L++ +
Sbjct: 211 ADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGM--PQFLSTEAQSLLRALFKRN 268
Query: 489 PSSR 492
P++R
Sbjct: 269 PANR 272
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKM-SFAGTVAWMAPEVIRNEQCSDKIDIWYKNRLC 235
+L+ + K++DFG +E + K SF GTV +MAPEV+ + S D W L
Sbjct: 161 ILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLM 220
Query: 236 F 236
F
Sbjct: 221 F 221
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 124/265 (46%), Gaps = 24/265 (9%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSGKLR-SEIVAVKKVREQKE--------TDIRHLR 304
D WEI E LG GA G V+ + + + ++A KV + K +I L
Sbjct: 37 DFWEIIGE-------LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILA 89
Query: 305 KLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE-VPPQRLYNWARQIAAGMN 363
+HPNIVK I++E+CA G + ++ + E + ++ +Q +N
Sbjct: 90 SCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALN 149
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFG-TCREWNNKSTKMSFAGTVAWMAPEVIRN 422
YLH +IIHRDLK+ N+L + K++DFG + + + F GT WMAPEV+
Sbjct: 150 YLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMC 209
Query: 423 EQCSD-----KIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSS-LHLPIPSTCPDG 476
E D K D+WS GI L E+ E P+ +++ ++ + S L PS
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSN 269
Query: 477 FQLLMKMCWSNAPSSRPSFKQILSH 501
F+ +K C +R + Q+L H
Sbjct: 270 FKDFLKKCLEKNVDARWTTSQLLQH 294
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 176 GVLIGSKEEAKISDFG-TCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSD-----KIDIW 229
+L + K++DFG + + + F GT WMAPEV+ E D K D+W
Sbjct: 165 NILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVW 224
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 119/248 (47%), Gaps = 21/248 (8%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVK---KVREQKETDIRHLRK-------LNHPNIVKFKG 316
LG G G V+ + R I+A+K K + +K LR+ L HPNI++ G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLK 376
A +++EY G +Y L+ QR + ++A ++Y HSK++IHRD+K
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRDIK 139
Query: 377 SPNVLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWS 433
N+L+GS E KI+DFG W+ S + + GT+ ++ PE+I +K+D+WS
Sbjct: 140 PENLLLGSNGELKIADFG----WSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWS 195
Query: 434 YGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRP 493
G++ +E L P++ + S + P +G + L+ + S R
Sbjct: 196 LGVLCYEFLVGMPPFEAHTYQETYRRI--SRVEFTFPDFVTEGARDLISRLLKHNASQRL 253
Query: 494 SFKQILSH 501
+ ++L H
Sbjct: 254 TLAEVLEH 261
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 177 VLIGSKEEAKISDFGTCREWN---NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+GS E KI+DFG W+ S + + GT+ ++ PE+I +K+D+W
Sbjct: 143 LLLGSNGELKIADFG----WSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 198
Query: 234 LCF 236
LC+
Sbjct: 199 LCY 201
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 111/206 (53%), Gaps = 15/206 (7%)
Query: 258 IPFESISDL-QWLGSGAQGAV--FSGKLRSEIVAVKKVREQKETD--------IRHLRKL 306
+PF DL Q LG GA G V ++ E VAVK V ++ D I + L
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKML 61
Query: 307 NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLH 366
NH N+VKF G + + +EYC+ G L++ ++ +P + Q+ AG+ YLH
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 367 SKQIIHRDLKSPNVLIGSKEEAKISDFG--TCREWNNKSTKMS-FAGTVAWMAPEVI-RN 422
I HRD+K N+L+ ++ KISDFG T +NN+ ++ GT+ ++APE++ R
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 423 EQCSDKIDIWSYGIVLWELLTCETPY 448
E ++ +D+WS GIVL +L E P+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 111/206 (53%), Gaps = 15/206 (7%)
Query: 258 IPFESISDL-QWLGSGAQGAV--FSGKLRSEIVAVKKVREQKETD--------IRHLRKL 306
+PF DL Q LG GA G V ++ E VAVK V ++ D I + L
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKML 62
Query: 307 NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLH 366
NH N+VKF G + + +EYC+ G L++ ++ +P + Q+ AG+ YLH
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 367 SKQIIHRDLKSPNVLIGSKEEAKISDFG--TCREWNNKSTKMS-FAGTVAWMAPEVI-RN 422
I HRD+K N+L+ ++ KISDFG T +NN+ ++ GT+ ++APE++ R
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 182
Query: 423 EQCSDKIDIWSYGIVLWELLTCETPY 448
E ++ +D+WS GIVL +L E P+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 121/258 (46%), Gaps = 21/258 (8%)
Query: 260 FESISDLQWLGSGAQGAVFSGKLR-SEIVAVKK---------VREQKETDIRHLRKLNHP 309
FE IS+L G+G G VF + S +V +K +R Q +++ L + N P
Sbjct: 27 FEKISEL---GAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 83
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK- 368
IV F G I ME+ G L +LK +P Q L + + G+ YL K
Sbjct: 84 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 143
Query: 369 QIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDK 428
+I+HRD+K N+L+ S+ E K+ DFG + + S SF GT ++M+PE ++ S +
Sbjct: 144 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQGTHYSVQ 202
Query: 429 IDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDG-----FQLLMKM 483
DIWS G+ L E+ P S I+ + ++ P P P G FQ +
Sbjct: 203 SDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEP-PPKLPSGVFSLEFQDFVNK 261
Query: 484 CWSNAPSSRPSFKQILSH 501
C P+ R KQ++ H
Sbjct: 262 CLIKNPAERADLKQLMVH 279
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ S+ E K+ DFG + + S SF GT ++M+PE ++ S + DIW
Sbjct: 155 ILVNSRGEIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQGTHYSVQSDIW 206
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 111/206 (53%), Gaps = 15/206 (7%)
Query: 258 IPFESISDL-QWLGSGAQGAV--FSGKLRSEIVAVKKVREQKETD--------IRHLRKL 306
+PF DL Q LG GA G V ++ E VAVK V ++ D I + L
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKML 61
Query: 307 NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLH 366
NH N+VKF G + + +EYC+ G L++ ++ +P + Q+ AG+ YLH
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 367 SKQIIHRDLKSPNVLIGSKEEAKISDFG--TCREWNNKSTKMS-FAGTVAWMAPEVI-RN 422
I HRD+K N+L+ ++ KISDFG T +NN+ ++ GT+ ++APE++ R
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 423 EQCSDKIDIWSYGIVLWELLTCETPY 448
E ++ +D+WS GIVL +L E P+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 143/298 (47%), Gaps = 42/298 (14%)
Query: 258 IPFESISDLQWLGSGAQGAVFSGKLRSE-----IVAVKKVREQ--KETDIRH-------L 303
IP + + + LG G G+V +L+ E VAVK ++ +DI +
Sbjct: 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACM 79
Query: 304 RKLNHPNIVKFKGVCTQA------PCYCIVMEYCAYGPLYNLL---KDGEE---VPPQRL 351
++ +HP++ K GV ++ P +++ + +G L+ L + GE +P Q L
Sbjct: 80 KEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTL 139
Query: 352 YNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCRE-WNNKSTKMSFAG 410
+ IA GM YL S+ IHRDL + N ++ ++DFG R+ ++ + A
Sbjct: 140 VRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCAS 199
Query: 411 T--VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAII-WGVGSSSLH 466
V W+A E + + + D+W++G+ +WE++T +TPY ++++ I + +G + L
Sbjct: 200 KLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLK 259
Query: 467 LPIPSTCPDGFQLLMKMCWSNAPSSRPSF-------KQILSHLDI--ASQEVLRIQPE 515
P C + LM CWS P RPSF + IL HL + SQ+ L I E
Sbjct: 260 Q--PPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTSQDPLYINIE 315
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 113/206 (54%), Gaps = 15/206 (7%)
Query: 258 IPFESISDL-QWLGSGAQGAV--FSGKLRSEIVAVKKVREQKETDI-RHLRK-------L 306
+PF DL Q LG GA G V ++ E VAVK V ++ D +++K L
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 307 NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLH 366
NH N+VKF G + + +EYC+ G L++ ++ +P + Q+ AG+ YLH
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 367 SKQIIHRDLKSPNVLIGSKEEAKISDFG--TCREWNNKSTKMS-FAGTVAWMAPEVI-RN 422
I HRD+K N+L+ ++ KISDFG T +NN+ ++ GT+ ++APE++ R
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 423 EQCSDKIDIWSYGIVLWELLTCETPY 448
E ++ +D+WS GIVL +L E P+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 126/254 (49%), Gaps = 12/254 (4%)
Query: 259 PFESISDLQWLGSGAQGAVFSGK--LRSEIVAVKKVREQKE-------TDIRHLRKLNHP 309
P + + + +G GA G V++ + VA++++ Q++ +I +R+ +P
Sbjct: 19 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNP 78
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQ 369
NIV + +VMEY A G L +++ + + ++ R+ + +LHS Q
Sbjct: 79 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQ 137
Query: 370 IIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMS-FAGTVAWMAPEVIRNEQCSDK 428
+IHR++KS N+L+G K++DFG C + + +K S GT WMAPEV+ + K
Sbjct: 138 VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPK 197
Query: 429 IDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSL-HLPIPSTCPDGFQLLMKMCWSN 487
+DIWS GI+ E++ E PY + + ++ + ++ L P F+ + C
Sbjct: 198 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEM 257
Query: 488 APSSRPSFKQILSH 501
R S K+++ H
Sbjct: 258 DVEKRGSAKELIQH 271
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMS-FAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+G K++DFG C + + +K S GT WMAPEV+ + K+DIW
Sbjct: 148 ILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIW 201
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 126/268 (47%), Gaps = 29/268 (10%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFSGKLRSEIVAVKKVREQKETDIRHL----------R 304
E++ ++ D LG G G V++G+ S V + ++E E D R+ +
Sbjct: 16 EYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIA-IKEIPERDSRYSQPLHEEIALHK 74
Query: 305 KLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLL-------KDGEEVPPQRLYNWARQ 357
L H NIV++ G ++ I ME G L LL KD E Q + + +Q
Sbjct: 75 HLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNE----QTIGFYTKQ 130
Query: 358 IAAGMNYLHSKQIIHRDLKSPNVLIGSKEEA-KISDFGTCREWN--NKSTKMSFAGTVAW 414
I G+ YLH QI+HRD+K NVLI + KISDFGT + N T+ +F GT+ +
Sbjct: 131 ILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTE-TFTGTLQY 189
Query: 415 MAPEVIRN--EQCSDKIDIWSYGIVLWELLTCETPYKDV-DSSAIIWGVGSSSLHLPIPS 471
MAPE+I DIWS G + E+ T + P+ ++ + A ++ VG +H IP
Sbjct: 190 MAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPE 249
Query: 472 TCPDGFQLLMKMCWSNAPSSRPSFKQIL 499
+ + + C+ P R +L
Sbjct: 250 SMSAEAKAFILKCFEPDPDKRACANDLL 277
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%), Gaps = 3/34 (8%)
Query: 186 KISDFGTCREWN--NKSTKMSFAGTVAWMAPEVI 217
KISDFGT + N T+ +F GT+ +MAPE+I
Sbjct: 163 KISDFGTSKRLAGINPCTE-TFTGTLQYMAPEII 195
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 120/246 (48%), Gaps = 33/246 (13%)
Query: 284 SEIVAVKKVRE----------QKETDIRHLRKLNHPNIVKFKGVCTQA--PCYCIVMEYC 331
E+VAVK ++ ++E DI LR L H +I+K+KG C +VMEY
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDI--LRTLYHEHIIKYKGCCEDQGEKSLQLVMEYV 100
Query: 332 AYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKIS 391
G L + L + +L +A+QI GM YLHS+ IHR+L + NVL+ + KI
Sbjct: 101 PLGSLRDYLPR-HSIGLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIG 159
Query: 392 DFGTCREW--NNKSTKMSFAGT--VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLT-CET 446
DFG + ++ ++ G V W APE ++ + D+WS+G+ L+ELLT C++
Sbjct: 160 DFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDS 219
Query: 447 ----PYKDVDSSAIIWG---------VGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRP 493
P K ++ I G + LP P CP LMK CW S RP
Sbjct: 220 SQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRP 279
Query: 494 SFKQIL 499
+F+ ++
Sbjct: 280 TFENLI 285
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 113/206 (54%), Gaps = 15/206 (7%)
Query: 258 IPFESISDL-QWLGSGAQGAV--FSGKLRSEIVAVKKVREQKETDI-RHLRK-------L 306
+PF DL Q LG GA G V ++ E VAVK V ++ D +++K L
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 307 NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLH 366
NH N+VKF G + + +EYC+ G L++ ++ +P + Q+ AG+ YLH
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 367 SKQIIHRDLKSPNVLIGSKEEAKISDFG--TCREWNNKSTKMS-FAGTVAWMAPEVI-RN 422
I HRD+K N+L+ ++ KISDFG T +NN+ ++ GT+ ++APE++ R
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 423 EQCSDKIDIWSYGIVLWELLTCETPY 448
E ++ +D+WS GIVL +L E P+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 113/206 (54%), Gaps = 15/206 (7%)
Query: 258 IPFESISDL-QWLGSGAQGAV--FSGKLRSEIVAVKKVREQKETDI-RHLRK-------L 306
+PF DL Q LG GA G V ++ E VAVK V ++ D +++K L
Sbjct: 2 VPFVEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 307 NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLH 366
NH N+VKF G + + +EYC+ G L++ ++ +P + Q+ AG+ YLH
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 367 SKQIIHRDLKSPNVLIGSKEEAKISDFG--TCREWNNKSTKMS-FAGTVAWMAPEVI-RN 422
I HRD+K N+L+ ++ KISDFG T +NN+ ++ GT+ ++APE++ R
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 423 EQCSDKIDIWSYGIVLWELLTCETPY 448
E ++ +D+WS GIVL +L E P+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 113/206 (54%), Gaps = 15/206 (7%)
Query: 258 IPFESISDL-QWLGSGAQGAV--FSGKLRSEIVAVKKVREQKETDI-RHLRK-------L 306
+PF DL Q LG GA G V ++ E VAVK V ++ D +++K L
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 307 NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLH 366
NH N+VKF G + + +EYC+ G L++ ++ +P + Q+ AG+ YLH
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 367 SKQIIHRDLKSPNVLIGSKEEAKISDFG--TCREWNNKSTKMS-FAGTVAWMAPEVI-RN 422
I HRD+K N+L+ ++ KISDFG T +NN+ ++ GT+ ++APE++ R
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 423 EQCSDKIDIWSYGIVLWELLTCETPY 448
E ++ +D+WS GIVL +L E P+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 113/206 (54%), Gaps = 15/206 (7%)
Query: 258 IPFESISDL-QWLGSGAQGAV--FSGKLRSEIVAVKKVREQKETDI-RHLRK-------L 306
+PF DL Q LG GA G V ++ E VAVK V ++ D +++K L
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 307 NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLH 366
NH N+VKF G + + +EYC+ G L++ ++ +P + Q+ AG+ YLH
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 367 SKQIIHRDLKSPNVLIGSKEEAKISDFG--TCREWNNKSTKMS-FAGTVAWMAPEVI-RN 422
I HRD+K N+L+ ++ KISDFG T +NN+ ++ GT+ ++APE++ R
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 423 EQCSDKIDIWSYGIVLWELLTCETPY 448
E ++ +D+WS GIVL +L E P+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 124/251 (49%), Gaps = 21/251 (8%)
Query: 269 LGSGAQGAVFSGKLR--SEIVAVKKVRE----QKET-----DIRHLRKLNHPNIVKFKGV 317
LG G+ G V K R + AVK + + K+T ++ L+KL+HPNI+K +
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 318 CTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKS 377
+ + IV E G L++ + + +Q+ +G+ Y+H I+HRDLK
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKP 149
Query: 378 PNVLIGSKE---EAKISDFG--TCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 432
N+L+ SKE + KI DFG TC + N K GT ++APEV+R +K D+W
Sbjct: 150 ENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR--IGTAYYIAPEVLRG-TYDEKCDVW 206
Query: 433 SYGIVLWELLTCETPYKDVDSSAIIWGV--GSSSLHLPIPSTCPDGFQLLMKMCWSNAPS 490
S G++L+ LL+ P+ + I+ V G + LP T D + L++ + PS
Sbjct: 207 SAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPS 266
Query: 491 SRPSFKQILSH 501
R + Q L H
Sbjct: 267 LRITATQCLEH 277
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 8/58 (13%)
Query: 177 VLIGSKE---EAKISDFG--TCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ SKE + KI DFG TC + N K GT ++APEV+R +K D+W
Sbjct: 152 ILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR--IGTAYYIAPEVLRG-TYDEKCDVW 206
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 113/206 (54%), Gaps = 15/206 (7%)
Query: 258 IPFESISDL-QWLGSGAQGAV--FSGKLRSEIVAVKKVREQKETDI-RHLRK-------L 306
+PF DL Q LG GA G V ++ E VAVK V ++ D +++K L
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 307 NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLH 366
NH N+VKF G + + +EYC+ G L++ ++ +P + Q+ AG+ YLH
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 367 SKQIIHRDLKSPNVLIGSKEEAKISDFG--TCREWNNKSTKMS-FAGTVAWMAPEVI-RN 422
I HRD+K N+L+ ++ KISDFG T +NN+ ++ GT+ ++APE++ R
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 423 EQCSDKIDIWSYGIVLWELLTCETPY 448
E ++ +D+WS GIVL +L E P+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 113/206 (54%), Gaps = 15/206 (7%)
Query: 258 IPFESISDL-QWLGSGAQGAV--FSGKLRSEIVAVKKVREQKETDI-RHLRK-------L 306
+PF DL Q LG GA G V ++ E VAVK V ++ D +++K L
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 307 NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLH 366
NH N+VKF G + + +EYC+ G L++ ++ +P + Q+ AG+ YLH
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 367 SKQIIHRDLKSPNVLIGSKEEAKISDFG--TCREWNNKSTKMS-FAGTVAWMAPEVI-RN 422
I HRD+K N+L+ ++ KISDFG T +NN+ ++ GT+ ++APE++ R
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 423 EQCSDKIDIWSYGIVLWELLTCETPY 448
E ++ +D+WS GIVL +L E P+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 113/206 (54%), Gaps = 15/206 (7%)
Query: 258 IPFESISDL-QWLGSGAQGAV--FSGKLRSEIVAVKKVREQKETDI-RHLRK-------L 306
+PF DL Q LG GA G V ++ E VAVK V ++ D +++K L
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 307 NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLH 366
NH N+VKF G + + +EYC+ G L++ ++ +P + Q+ AG+ YLH
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 367 SKQIIHRDLKSPNVLIGSKEEAKISDFG--TCREWNNKSTKMS-FAGTVAWMAPEVI-RN 422
I HRD+K N+L+ ++ KISDFG T +NN+ ++ GT+ ++APE++ R
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 423 EQCSDKIDIWSYGIVLWELLTCETPY 448
E ++ +D+WS GIVL +L E P+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 113/206 (54%), Gaps = 15/206 (7%)
Query: 258 IPFESISDL-QWLGSGAQGAV--FSGKLRSEIVAVKKVREQKETDI-RHLRK-------L 306
+PF DL Q LG GA G V ++ E VAVK V ++ D +++K L
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 307 NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLH 366
NH N+VKF G + + +EYC+ G L++ ++ +P + Q+ AG+ YLH
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 367 SKQIIHRDLKSPNVLIGSKEEAKISDFG--TCREWNNKSTKMS-FAGTVAWMAPEVI-RN 422
I HRD+K N+L+ ++ KISDFG T +NN+ ++ GT+ ++APE++ R
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 423 EQCSDKIDIWSYGIVLWELLTCETPY 448
E ++ +D+WS GIVL +L E P+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 126/268 (47%), Gaps = 29/268 (10%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFSGKLRSEIVAVKKVREQKETDIRHL----------R 304
E++ ++ D LG G G V++G+ S V + ++E E D R+ +
Sbjct: 2 EYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIA-IKEIPERDSRYSQPLHEEIALHK 60
Query: 305 KLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLL-------KDGEEVPPQRLYNWARQ 357
L H NIV++ G ++ I ME G L LL KD E Q + + +Q
Sbjct: 61 HLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNE----QTIGFYTKQ 116
Query: 358 IAAGMNYLHSKQIIHRDLKSPNVLIGSKEEA-KISDFGTCREWN--NKSTKMSFAGTVAW 414
I G+ YLH QI+HRD+K NVLI + KISDFGT + N T+ +F GT+ +
Sbjct: 117 ILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTE-TFTGTLQY 175
Query: 415 MAPEVIRN--EQCSDKIDIWSYGIVLWELLTCETPYKDV-DSSAIIWGVGSSSLHLPIPS 471
MAPE+I DIWS G + E+ T + P+ ++ + A ++ VG +H IP
Sbjct: 176 MAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPE 235
Query: 472 TCPDGFQLLMKMCWSNAPSSRPSFKQIL 499
+ + + C+ P R +L
Sbjct: 236 SMSAEAKAFILKCFEPDPDKRACANDLL 263
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Query: 186 KISDFGTCREWN--NKSTKMSFAGTVAWMAPEVIRN--EQCSDKIDIW 229
KISDFGT + N T+ +F GT+ +MAPE+I DIW
Sbjct: 149 KISDFGTSKRLAGINPCTE-TFTGTLQYMAPEIIDKGPRGYGKAADIW 195
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 113/206 (54%), Gaps = 15/206 (7%)
Query: 258 IPFESISDL-QWLGSGAQGAV--FSGKLRSEIVAVKKVREQKETDI-RHLRK-------L 306
+PF DL Q LG GA G V ++ E VAVK V ++ D +++K L
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 307 NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLH 366
NH N+VKF G + + +EYC+ G L++ ++ +P + Q+ AG+ YLH
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 367 SKQIIHRDLKSPNVLIGSKEEAKISDFG--TCREWNNKSTKMS-FAGTVAWMAPEVI-RN 422
I HRD+K N+L+ ++ KISDFG T +NN+ ++ GT+ ++APE++ R
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 423 EQCSDKIDIWSYGIVLWELLTCETPY 448
E ++ +D+WS GIVL +L E P+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 113/206 (54%), Gaps = 15/206 (7%)
Query: 258 IPFESISDL-QWLGSGAQGAV--FSGKLRSEIVAVKKVREQKETDI-RHLRK-------L 306
+PF DL Q LG GA G V ++ E VAVK V ++ D +++K L
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 307 NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLH 366
NH N+VKF G + + +EYC+ G L++ ++ +P + Q+ AG+ YLH
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 367 SKQIIHRDLKSPNVLIGSKEEAKISDFG--TCREWNNKSTKMS-FAGTVAWMAPEVI-RN 422
I HRD+K N+L+ ++ KISDFG T +NN+ ++ GT+ ++APE++ R
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 423 EQCSDKIDIWSYGIVLWELLTCETPY 448
E ++ +D+WS GIVL +L E P+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 113/206 (54%), Gaps = 15/206 (7%)
Query: 258 IPFESISDL-QWLGSGAQGAV--FSGKLRSEIVAVKKVREQKETDI-RHLRK-------L 306
+PF DL Q LG GA G V ++ E VAVK V ++ D +++K L
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 307 NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLH 366
NH N+VKF G + + +EYC+ G L++ ++ +P + Q+ AG+ YLH
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 367 SKQIIHRDLKSPNVLIGSKEEAKISDFG--TCREWNNKSTKMS-FAGTVAWMAPEVI-RN 422
I HRD+K N+L+ ++ KISDFG T +NN+ ++ GT+ ++APE++ R
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 423 EQCSDKIDIWSYGIVLWELLTCETPY 448
E ++ +D+WS GIVL +L E P+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 113/206 (54%), Gaps = 15/206 (7%)
Query: 258 IPFESISDL-QWLGSGAQGAV--FSGKLRSEIVAVKKVREQKETDI-RHLRK-------L 306
+PF DL Q LG GA G V ++ E VAVK V ++ D +++K L
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 307 NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLH 366
NH N+VKF G + + +EYC+ G L++ ++ +P + Q+ AG+ YLH
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 367 SKQIIHRDLKSPNVLIGSKEEAKISDFG--TCREWNNKSTKMS-FAGTVAWMAPEVI-RN 422
I HRD+K N+L+ ++ KISDFG T +NN+ ++ GT+ ++APE++ R
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 423 EQCSDKIDIWSYGIVLWELLTCETPY 448
E ++ +D+WS GIVL +L E P+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 123/254 (48%), Gaps = 27/254 (10%)
Query: 269 LGSGAQGA--VFSGKLRSEIVAVK------KVREQKETDIRHLRKLNHPNIVKFKGVCTQ 320
+GSG G + KL E+VAVK + E + +I + R L HPNIV+FK V
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILT 87
Query: 321 APCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNV 380
I+MEY + G LY + + + +Q+ +G++Y HS QI HRDLK N
Sbjct: 88 PTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENT 147
Query: 381 LI-GS-KEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKI-DIWSYGIV 437
L+ GS KI DFG + S S GT A++APEV+ ++ KI D+WS G+
Sbjct: 148 LLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVT 207
Query: 438 LWELLTCETPYKDV----DSSAIIWGVGSSSLHLPIPSTCPDGFQL------LMKMCWSN 487
L+ +L P++D D I + L + + PD ++ L+ +
Sbjct: 208 LYVMLVGAYPFEDPEEPRDYRKTIQRI------LSVKYSIPDDIRISPECCHLISRIFVA 261
Query: 488 APSSRPSFKQILSH 501
P++R S +I +H
Sbjct: 262 DPATRISIPEIKTH 275
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 186 KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKI-DIW 229
KI DFG + S S GT A++APEV+ ++ KI D+W
Sbjct: 158 KICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVW 202
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 113/206 (54%), Gaps = 15/206 (7%)
Query: 258 IPFESISDL-QWLGSGAQGAV--FSGKLRSEIVAVKKVREQKETDI-RHLRK-------L 306
+PF DL Q LG GA G V ++ E VAVK V ++ D +++K L
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAML 62
Query: 307 NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLH 366
NH N+VKF G + + +EYC+ G L++ ++ +P + Q+ AG+ YLH
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 367 SKQIIHRDLKSPNVLIGSKEEAKISDFG--TCREWNNKSTKMS-FAGTVAWMAPEVI-RN 422
I HRD+K N+L+ ++ KISDFG T +NN+ ++ GT+ ++APE++ R
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 423 EQCSDKIDIWSYGIVLWELLTCETPY 448
E ++ +D+WS GIVL +L E P+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 113/206 (54%), Gaps = 15/206 (7%)
Query: 258 IPFESISDL-QWLGSGAQGAV--FSGKLRSEIVAVKKVREQKETDI-RHLRK-------L 306
+PF DL Q LG GA G V ++ E VAVK V ++ D +++K L
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 307 NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLH 366
NH N+VKF G + + +EYC+ G L++ ++ +P + Q+ AG+ YLH
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 367 SKQIIHRDLKSPNVLIGSKEEAKISDFG--TCREWNNKSTKMS-FAGTVAWMAPEVI-RN 422
I HRD+K N+L+ ++ KISDFG T +NN+ ++ GT+ ++APE++ R
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 423 EQCSDKIDIWSYGIVLWELLTCETPY 448
E ++ +D+WS GIVL +L E P+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 113/206 (54%), Gaps = 15/206 (7%)
Query: 258 IPFESISDL-QWLGSGAQGAV--FSGKLRSEIVAVKKVREQKETDI-RHLRK-------L 306
+PF DL Q LG GA G V ++ E VAVK V ++ D +++K L
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 307 NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLH 366
NH N+VKF G + + +EYC+ G L++ ++ +P + Q+ AG+ YLH
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 367 SKQIIHRDLKSPNVLIGSKEEAKISDFG--TCREWNNKSTKMS-FAGTVAWMAPEVI-RN 422
I HRD+K N+L+ ++ KISDFG T +NN+ ++ GT+ ++APE++ R
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 423 EQCSDKIDIWSYGIVLWELLTCETPY 448
E ++ +D+WS GIVL +L E P+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 113/206 (54%), Gaps = 15/206 (7%)
Query: 258 IPFESISDL-QWLGSGAQGAV--FSGKLRSEIVAVKKVREQKETDI-RHLRK-------L 306
+PF DL Q LG GA G V ++ E VAVK V ++ D +++K L
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 307 NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLH 366
NH N+VKF G + + +EYC+ G L++ ++ +P + Q+ AG+ YLH
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 367 SKQIIHRDLKSPNVLIGSKEEAKISDFG--TCREWNNKSTKMS-FAGTVAWMAPEVI-RN 422
I HRD+K N+L+ ++ KISDFG T +NN+ ++ GT+ ++APE++ R
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 423 EQCSDKIDIWSYGIVLWELLTCETPY 448
E ++ +D+WS GIVL +L E P+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 133/285 (46%), Gaps = 23/285 (8%)
Query: 266 LQWLGSGAQGAVF------SGK------LRSEIVAVKKVREQKETDIRHLRKLNHPNIVK 313
L+ LG G G V +G+ LR E++ K T+ R L+ HP +
Sbjct: 13 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTA 72
Query: 314 FKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHR 373
K C VMEY G L+ L +R + +I + + YLHS+ +++R
Sbjct: 73 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 132
Query: 374 DLKSPNVLIGSKEEAKISDFGTCREW-NNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 432
D+K N+++ KI+DFG C+E ++ +T +F GT ++APEV+ + +D W
Sbjct: 133 DIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWW 192
Query: 433 SYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSR 492
G+V++E++ P+ + D + + + P + P+ LL + + P R
Sbjct: 193 GLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP-RTLSPEAKSLLAGLLKKD-PKQR 250
Query: 493 ----PS-FKQILSH---LDIASQEVLRIQPEPYYKMQMIWKEEIR 529
PS K+++ H L I Q+V++ + P +K Q+ + + R
Sbjct: 251 LGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTR 295
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 167 DALAESIGLGVLIGSKE-EAKISDFGTCREW-NNKSTKMSFAGTVAWMAPEVIRNEQCSD 224
D + I L L+ K+ KI+DFG C+E ++ +T +F GT ++APEV+ +
Sbjct: 128 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGR 187
Query: 225 KIDIW 229
+D W
Sbjct: 188 AVDWW 192
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 133/285 (46%), Gaps = 23/285 (8%)
Query: 266 LQWLGSGAQGAVF------SGK------LRSEIVAVKKVREQKETDIRHLRKLNHPNIVK 313
L+ LG G G V +G+ LR E++ K T+ R L+ HP +
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTA 69
Query: 314 FKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHR 373
K C VMEY G L+ L +R + +I + + YLHS+ +++R
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 129
Query: 374 DLKSPNVLIGSKEEAKISDFGTCREW-NNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 432
D+K N+++ KI+DFG C+E ++ +T +F GT ++APEV+ + +D W
Sbjct: 130 DIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWW 189
Query: 433 SYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSR 492
G+V++E++ P+ + D + + + P + P+ LL + + P R
Sbjct: 190 GLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP-RTLSPEAKSLLAGLLKKD-PKQR 247
Query: 493 ----PS-FKQILSH---LDIASQEVLRIQPEPYYKMQMIWKEEIR 529
PS K+++ H L I Q+V++ + P +K Q+ + + R
Sbjct: 248 LGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTR 292
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 167 DALAESIGLGVLIGSKE-EAKISDFGTCREW-NNKSTKMSFAGTVAWMAPEVIRNEQCSD 224
D + I L L+ K+ KI+DFG C+E ++ +T +F GT ++APEV+ +
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGR 184
Query: 225 KIDIW 229
+D W
Sbjct: 185 AVDWW 189
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 120/246 (48%), Gaps = 33/246 (13%)
Query: 284 SEIVAVKKVRE----------QKETDIRHLRKLNHPNIVKFKGVCTQA--PCYCIVMEYC 331
E+VAVK ++ ++E DI LR L H +I+K+KG C +VMEY
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDI--LRTLYHEHIIKYKGCCEDQGEKSLQLVMEYV 100
Query: 332 AYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKIS 391
G L + L + +L +A+QI GM YLH++ IHR+L + NVL+ + KI
Sbjct: 101 PLGSLRDYLPR-HSIGLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIG 159
Query: 392 DFGTCREW--NNKSTKMSFAGT--VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLT-CET 446
DFG + ++ ++ G V W APE ++ + D+WS+G+ L+ELLT C++
Sbjct: 160 DFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDS 219
Query: 447 ----PYKDVDSSAIIWG---------VGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRP 493
P K ++ I G + LP P CP LMK CW S RP
Sbjct: 220 SQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRP 279
Query: 494 SFKQIL 499
+F+ ++
Sbjct: 280 TFENLI 285
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 133/285 (46%), Gaps = 23/285 (8%)
Query: 266 LQWLGSGAQGAVF------SGK------LRSEIVAVKKVREQKETDIRHLRKLNHPNIVK 313
L+ LG G G V +G+ LR E++ K T+ R L+ HP +
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTA 69
Query: 314 FKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHR 373
K C VMEY G L+ L +R + +I + + YLHS+ +++R
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 129
Query: 374 DLKSPNVLIGSKEEAKISDFGTCREW-NNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 432
D+K N+++ KI+DFG C+E ++ +T +F GT ++APEV+ + +D W
Sbjct: 130 DIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWW 189
Query: 433 SYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSR 492
G+V++E++ P+ + D + + + P + P+ LL + + P R
Sbjct: 190 GLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP-RTLSPEAKSLLAGLLKKD-PKQR 247
Query: 493 ----PS-FKQILSH---LDIASQEVLRIQPEPYYKMQMIWKEEIR 529
PS K+++ H L I Q+V++ + P +K Q+ + + R
Sbjct: 248 LGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTR 292
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 167 DALAESIGLGVLIGSKE-EAKISDFGTCREW-NNKSTKMSFAGTVAWMAPEVIRNEQCSD 224
D + I L L+ K+ KI+DFG C+E ++ +T +F GT ++APEV+ +
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGR 184
Query: 225 KIDIW 229
+D W
Sbjct: 185 AVDWW 189
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 109/215 (50%), Gaps = 14/215 (6%)
Query: 266 LQWLGSGAQGAVF------SGK------LRSEIVAVKKVREQKETDIRHLRKLNHPNIVK 313
L+ LG+G+ G V +G+ L+ EIV K E + L + HP I++
Sbjct: 11 LRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIR 70
Query: 314 FKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHR 373
G A ++M+Y G L++LL+ + P +A ++ + YLHSK II+R
Sbjct: 71 MWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYR 130
Query: 374 DLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWS 433
DLK N+L+ KI+DFG + + + + GT ++APEV+ + + ID WS
Sbjct: 131 DLKPENILLDKNGHIKITDFGFAKYVPDVTYXL--CGTPDYIAPEVVSTKPYNKSIDWWS 188
Query: 434 YGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLP 468
+GI+++E+L TP+ D ++ + ++ L P
Sbjct: 189 FGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP 223
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 132/285 (46%), Gaps = 23/285 (8%)
Query: 266 LQWLGSGAQGAVF------SGK------LRSEIVAVKKVREQKETDIRHLRKLNHPNIVK 313
L+ LG G G V +G+ LR E++ K T+ R L+ HP +
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTA 69
Query: 314 FKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHR 373
K C VMEY G L+ L +R + +I + + YLHS+ +++R
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 129
Query: 374 DLKSPNVLIGSKEEAKISDFGTCREW-NNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 432
D+K N+++ KI+DFG C+E ++ +T F GT ++APEV+ + +D W
Sbjct: 130 DIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWW 189
Query: 433 SYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSR 492
G+V++E++ P+ + D + + + P + P+ LL + + P R
Sbjct: 190 GLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP-RTLSPEAKSLLAGLLKKD-PKQR 247
Query: 493 ----PS-FKQILSH---LDIASQEVLRIQPEPYYKMQMIWKEEIR 529
PS K+++ H L I Q+V++ + P +K Q+ + + R
Sbjct: 248 LGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTR 292
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 167 DALAESIGLGVLIGSKE-EAKISDFGTCREW-NNKSTKMSFAGTVAWMAPEVIRNEQCSD 224
D + I L L+ K+ KI+DFG C+E ++ +T F GT ++APEV+ +
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGR 184
Query: 225 KIDIW 229
+D W
Sbjct: 185 AVDWW 189
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 132/285 (46%), Gaps = 23/285 (8%)
Query: 266 LQWLGSGAQGAVF------SGK------LRSEIVAVKKVREQKETDIRHLRKLNHPNIVK 313
L+ LG G G V +G+ LR E++ K T+ R L+ HP +
Sbjct: 15 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTA 74
Query: 314 FKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHR 373
K C VMEY G L+ L +R + +I + + YLHS+ +++R
Sbjct: 75 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 134
Query: 374 DLKSPNVLIGSKEEAKISDFGTCREW-NNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 432
D+K N+++ KI+DFG C+E ++ +T F GT ++APEV+ + +D W
Sbjct: 135 DIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWW 194
Query: 433 SYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSR 492
G+V++E++ P+ + D + + + P + P+ LL + + P R
Sbjct: 195 GLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP-RTLSPEAKSLLAGLLKKD-PKQR 252
Query: 493 ----PS-FKQILSH---LDIASQEVLRIQPEPYYKMQMIWKEEIR 529
PS K+++ H L I Q+V++ + P +K Q+ + + R
Sbjct: 253 LGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTR 297
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 167 DALAESIGLGVLIGSKE-EAKISDFGTCREW-NNKSTKMSFAGTVAWMAPEVIRNEQCSD 224
D + I L L+ K+ KI+DFG C+E ++ +T F GT ++APEV+ +
Sbjct: 130 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGR 189
Query: 225 KIDIW 229
+D W
Sbjct: 190 AVDWW 194
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 132/285 (46%), Gaps = 23/285 (8%)
Query: 266 LQWLGSGAQGAVF------SGK------LRSEIVAVKKVREQKETDIRHLRKLNHPNIVK 313
L+ LG G G V +G+ LR E++ K T+ R L+ HP +
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTA 69
Query: 314 FKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHR 373
K C VMEY G L+ L +R + +I + + YLHS+ +++R
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 129
Query: 374 DLKSPNVLIGSKEEAKISDFGTCREW-NNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 432
D+K N+++ KI+DFG C+E ++ +T F GT ++APEV+ + +D W
Sbjct: 130 DIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWW 189
Query: 433 SYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSR 492
G+V++E++ P+ + D + + + P + P+ LL + + P R
Sbjct: 190 GLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP-RTLSPEAKSLLAGLLKKD-PKQR 247
Query: 493 ----PS-FKQILSH---LDIASQEVLRIQPEPYYKMQMIWKEEIR 529
PS K+++ H L I Q+V++ + P +K Q+ + + R
Sbjct: 248 LGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTR 292
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 167 DALAESIGLGVLIGSKE-EAKISDFGTCREW-NNKSTKMSFAGTVAWMAPEVIRNEQCSD 224
D + I L L+ K+ KI+DFG C+E ++ +T F GT ++APEV+ +
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGR 184
Query: 225 KIDIW 229
+D W
Sbjct: 185 AVDWW 189
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 112/205 (54%), Gaps = 15/205 (7%)
Query: 259 PFESISDL-QWLGSGAQGAV--FSGKLRSEIVAVKKVREQKETDI-RHLRK-------LN 307
PF DL Q LG GA G V ++ E VAVK V ++ D +++K LN
Sbjct: 2 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 61
Query: 308 HPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHS 367
H N+VKF G + + +EYC+ G L++ ++ +P + Q+ AG+ YLH
Sbjct: 62 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 121
Query: 368 KQIIHRDLKSPNVLIGSKEEAKISDFG--TCREWNNKSTKMS-FAGTVAWMAPEVI-RNE 423
I HRD+K N+L+ ++ KISDFG T +NN+ ++ GT+ ++APE++ R E
Sbjct: 122 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 181
Query: 424 QCSDKIDIWSYGIVLWELLTCETPY 448
++ +D+WS GIVL +L E P+
Sbjct: 182 FHAEPVDVWSCGIVLTAMLAGELPW 206
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 132/285 (46%), Gaps = 23/285 (8%)
Query: 266 LQWLGSGAQGAVF------SGK------LRSEIVAVKKVREQKETDIRHLRKLNHPNIVK 313
L+ LG G G V +G+ LR E++ K T+ R L+ HP +
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTA 69
Query: 314 FKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHR 373
K C VMEY G L+ L +R + +I + + YLHS+ +++R
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 129
Query: 374 DLKSPNVLIGSKEEAKISDFGTCREW-NNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 432
D+K N+++ KI+DFG C+E ++ +T F GT ++APEV+ + +D W
Sbjct: 130 DIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWW 189
Query: 433 SYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSR 492
G+V++E++ P+ + D + + + P + P+ LL + + P R
Sbjct: 190 GLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP-RTLSPEAKSLLAGLLKKD-PKQR 247
Query: 493 ----PS-FKQILSH---LDIASQEVLRIQPEPYYKMQMIWKEEIR 529
PS K+++ H L I Q+V++ + P +K Q+ + + R
Sbjct: 248 LGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTR 292
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 167 DALAESIGLGVLIGSKE-EAKISDFGTCREW-NNKSTKMSFAGTVAWMAPEVIRNEQCSD 224
D + I L L+ K+ KI+DFG C+E ++ +T F GT ++APEV+ +
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGR 184
Query: 225 KIDIW 229
+D W
Sbjct: 185 AVDWW 189
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 120/255 (47%), Gaps = 33/255 (12%)
Query: 284 SEIVAVKKVRE----------QKETDIRHLRKLNHPNIVKFKGVCTQA--PCYCIVMEYC 331
E+VAVK ++E Q+E +I LR L H +IVK+KG C +VMEY
Sbjct: 37 GEMVAVKALKEGCGPQLRSGWQREIEI--LRTLYHEHIVKYKGCCEDQGEKSVQLVMEYV 94
Query: 332 AYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKIS 391
G L + L V +L +A+QI GM YLH++ IHR L + NVL+ + KI
Sbjct: 95 PLGSLRDYLPR-HCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIG 153
Query: 392 DFGTCREW--NNKSTKMSFAGT--VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLT-CET 446
DFG + ++ ++ G V W APE ++ + D+WS+G+ L+ELLT C++
Sbjct: 154 DFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDS 213
Query: 447 PYKDVDSSAIIWGVGSSSL-------------HLPIPSTCPDGFQLLMKMCWSNAPSSRP 493
+ G + LP P CP LMK CW S RP
Sbjct: 214 NQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRP 273
Query: 494 SFKQILSHLDIASQE 508
+F+ ++ L A ++
Sbjct: 274 TFQNLVPILQTAQEK 288
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 120/255 (47%), Gaps = 33/255 (12%)
Query: 284 SEIVAVKKVRE----------QKETDIRHLRKLNHPNIVKFKGVCTQA--PCYCIVMEYC 331
E+VAVK ++E Q+E +I LR L H +IVK+KG C +VMEY
Sbjct: 38 GEMVAVKALKEGCGPQLRSGWQREIEI--LRTLYHEHIVKYKGCCEDQGEKSVQLVMEYV 95
Query: 332 AYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKIS 391
G L + L V +L +A+QI GM YLH++ IHR L + NVL+ + KI
Sbjct: 96 PLGSLRDYLPR-HCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIG 154
Query: 392 DFGTCREW--NNKSTKMSFAGT--VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLT-CET 446
DFG + ++ ++ G V W APE ++ + D+WS+G+ L+ELLT C++
Sbjct: 155 DFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDS 214
Query: 447 PYKDVDSSAIIWGVGSSSL-------------HLPIPSTCPDGFQLLMKMCWSNAPSSRP 493
+ G + LP P CP LMK CW S RP
Sbjct: 215 NQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRP 274
Query: 494 SFKQILSHLDIASQE 508
+F+ ++ L A ++
Sbjct: 275 TFQNLVPILQTAQEK 289
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 118/226 (52%), Gaps = 25/226 (11%)
Query: 244 IGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKLR-SEIVAVKKVREQK------ 296
+G+ K F LR E ++ ++ + LG G G V+ G+L +VAVK+++E++
Sbjct: 14 LGQLKRFSLR-ELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGEL 72
Query: 297 --ETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPP------ 348
+T++ + H N+++ +G C +V Y A G + + L++ E P
Sbjct: 73 QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPK 132
Query: 349 -QRLYNWARQIAAGMNYLHSK---QIIHRDLKSPNVLIGSKEEAKISDFGTCR--EWNNK 402
QR+ A A G+ YLH +IIHRD+K+ N+L+ + EA + DFG + ++ +
Sbjct: 133 RQRI---ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDX 189
Query: 403 STKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
+ G + +APE + + S+K D++ YG++L EL+T + +
Sbjct: 190 HVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 235
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ + EA + DFG + ++ + + G + +APE + + S+K D++
Sbjct: 165 ILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVF 219
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 133/266 (50%), Gaps = 15/266 (5%)
Query: 299 DIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQI 358
++R ++ LNHPNIVK V +VMEY + G +++ L + + RQI
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 122
Query: 359 AAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPE 418
+ + Y H K I+HRDLK+ N+L+ + KI+DFG E+ + +F G+ + APE
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPE 182
Query: 419 VIRNEQCSD-KIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
+ + ++ ++D+WS G++L+ L++ P+ + + V +P + D
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMST-DCE 241
Query: 478 QLLMKMCWSNAPSSRPSFKQILSH--LDIASQEVLRIQPEPYYKMQMIWKEEIRVH-MLE 534
LL K N PS R + +QI+ +++ ++ + +PY + +K+ R M+
Sbjct: 242 NLLKKFLILN-PSKRGTLEQIMKDRWMNVGHED---DELKPYVEPLPDYKDPRRTELMVS 297
Query: 535 MQANKSHVPKFEEFEDDLIKKRENEL 560
M + EE +D L+ +R NE+
Sbjct: 298 MGYTR------EEIQDSLVGQRYNEV 317
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 51/102 (50%), Gaps = 11/102 (10%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSD-KIDIWYKNRLC 235
+L+ + KI+DFG E+ + +F G+ + APE+ + ++ ++D+W +
Sbjct: 144 LLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
Query: 236 FPTSLMA--------RIGEFKSFVLRDEWEIPFESISDLQWL 269
+ +L++ + E + VLR ++ IPF +D + L
Sbjct: 204 Y--TLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENL 243
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 133/266 (50%), Gaps = 15/266 (5%)
Query: 299 DIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQI 358
++R ++ LNHPNIVK V +VMEY + G +++ L + + RQI
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 122
Query: 359 AAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPE 418
+ + Y H K I+HRDLK+ N+L+ + KI+DFG E+ + +F G+ + APE
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPE 182
Query: 419 VIRNEQCSD-KIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
+ + ++ ++D+WS G++L+ L++ P+ + + V +P + D
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMST-DCE 241
Query: 478 QLLMKMCWSNAPSSRPSFKQILSH--LDIASQEVLRIQPEPYYKMQMIWKEEIRVH-MLE 534
LL K N PS R + +QI+ +++ ++ + +PY + +K+ R M+
Sbjct: 242 NLLKKFLILN-PSKRGTLEQIMKDRWMNVGHED---DELKPYVEPLPDYKDPRRTELMVS 297
Query: 535 MQANKSHVPKFEEFEDDLIKKRENEL 560
M + EE +D L+ +R NE+
Sbjct: 298 MGYTR------EEIQDSLVGQRYNEV 317
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 51/102 (50%), Gaps = 11/102 (10%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSD-KIDIWYKNRLC 235
+L+ + KI+DFG E+ + +F G+ + APE+ + ++ ++D+W +
Sbjct: 144 LLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
Query: 236 FPTSLMA--------RIGEFKSFVLRDEWEIPFESISDLQWL 269
+ +L++ + E + VLR ++ IPF +D + L
Sbjct: 204 Y--TLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENL 243
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 124/251 (49%), Gaps = 21/251 (8%)
Query: 269 LGSGAQGAVFSGKLR--SEIVAVKKVRE----QKET-----DIRHLRKLNHPNIVKFKGV 317
LG G+ G V K R + AVK + + K+T ++ L+KL+HPNI+K +
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 318 CTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKS 377
+ + IV E G L++ + + +Q+ +G+ Y+H I+HRDLK
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKP 149
Query: 378 PNVLIGSKE---EAKISDFG--TCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 432
N+L+ SKE + KI DFG TC + N K GT ++APEV+R +K D+W
Sbjct: 150 ENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR--IGTAYYIAPEVLRGTY-DEKCDVW 206
Query: 433 SYGIVLWELLTCETPYKDVDSSAIIWGV--GSSSLHLPIPSTCPDGFQLLMKMCWSNAPS 490
S G++L+ LL+ P+ + I+ V G + LP T D + L++ + PS
Sbjct: 207 SAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPS 266
Query: 491 SRPSFKQILSH 501
R + Q L H
Sbjct: 267 LRITATQCLEH 277
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 8/58 (13%)
Query: 177 VLIGSKE---EAKISDFG--TCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ SKE + KI DFG TC + N K GT ++APEV+R +K D+W
Sbjct: 152 ILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR--IGTAYYIAPEVLRGTY-DEKCDVW 206
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 132/266 (49%), Gaps = 15/266 (5%)
Query: 299 DIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQI 358
++R ++ LNHPNIVK V +VMEY + G +++ L + + RQI
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 122
Query: 359 AAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPE 418
+ + Y H K I+HRDLK+ N+L+ + KI+DFG E+ + +F G+ + APE
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPE 182
Query: 419 VIRNEQCSD-KIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
+ + ++ ++D+WS G++L+ L++ P+ + + V +P + D
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMST-DCE 241
Query: 478 QLLMKMCWSNAPSSRPSFKQILSH--LDIASQEVLRIQPEPYYKMQMIWKEEIRVH-MLE 534
LL K N PS R + +QI+ +++ ++ + +PY +K+ R M+
Sbjct: 242 NLLKKFLILN-PSKRGTLEQIMKDRWMNVGHED---DELKPYVAPLPDYKDPRRTELMVS 297
Query: 535 MQANKSHVPKFEEFEDDLIKKRENEL 560
M + EE +D L+ +R NE+
Sbjct: 298 MGYTR------EEIQDSLVGQRYNEV 317
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 51/102 (50%), Gaps = 11/102 (10%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSD-KIDIWYKNRLC 235
+L+ + KI+DFG E+ + +F G+ + APE+ + ++ ++D+W +
Sbjct: 144 LLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
Query: 236 FPTSLMA--------RIGEFKSFVLRDEWEIPFESISDLQWL 269
+ +L++ + E + VLR ++ IPF +D + L
Sbjct: 204 Y--TLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENL 243
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 132/266 (49%), Gaps = 15/266 (5%)
Query: 299 DIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQI 358
++R ++ LNHPNIVK V +VMEY + G +++ L + + RQI
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 122
Query: 359 AAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPE 418
+ + Y H K I+HRDLK+ N+L+ + KI+DFG E+ + +F G + APE
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPE 182
Query: 419 VIRNEQCSD-KIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
+ + ++ ++D+WS G++L+ L++ P+ + + V +P + D
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMST-DCE 241
Query: 478 QLLMKMCWSNAPSSRPSFKQILSH--LDIASQEVLRIQPEPYYKMQMIWKEEIRVH-MLE 534
LL K N PS R + +QI+ +++ ++ + +PY + +K+ R M+
Sbjct: 242 NLLKKFLILN-PSKRGTLEQIMKDRWMNVGHED---DELKPYVEPLPDYKDPRRTELMVS 297
Query: 535 MQANKSHVPKFEEFEDDLIKKRENEL 560
M + EE +D L+ +R NE+
Sbjct: 298 MGYTR------EEIQDSLVGQRYNEV 317
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 50/102 (49%), Gaps = 11/102 (10%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSD-KIDIWYKNRLC 235
+L+ + KI+DFG E+ + +F G + APE+ + ++ ++D+W +
Sbjct: 144 LLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
Query: 236 FPTSLMA--------RIGEFKSFVLRDEWEIPFESISDLQWL 269
+ +L++ + E + VLR ++ IPF +D + L
Sbjct: 204 Y--TLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENL 243
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 124/251 (49%), Gaps = 21/251 (8%)
Query: 269 LGSGAQGAVFSGKLR--SEIVAVKKVRE----QKET-----DIRHLRKLNHPNIVKFKGV 317
LG G+ G V K R + AVK + + K+T ++ L+KL+HPNI+K +
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 318 CTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKS 377
+ + IV E G L++ + + +Q+ +G+ Y+H I+HRDLK
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKP 149
Query: 378 PNVLIGSKE---EAKISDFG--TCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 432
N+L+ SKE + KI DFG TC + N K GT ++APEV+R +K D+W
Sbjct: 150 ENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR--IGTAYYIAPEVLRGTY-DEKCDVW 206
Query: 433 SYGIVLWELLTCETPYKDVDSSAIIWGV--GSSSLHLPIPSTCPDGFQLLMKMCWSNAPS 490
S G++L+ LL+ P+ + I+ V G + LP T D + L++ + PS
Sbjct: 207 SAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPS 266
Query: 491 SRPSFKQILSH 501
R + Q L H
Sbjct: 267 LRITATQCLEH 277
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 8/58 (13%)
Query: 177 VLIGSKE---EAKISDFG--TCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ SKE + KI DFG TC + N K GT ++APEV+R +K D+W
Sbjct: 152 ILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR--IGTAYYIAPEVLRGTY-DEKCDVW 206
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 132/266 (49%), Gaps = 15/266 (5%)
Query: 299 DIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQI 358
++R ++ LNHPNIVK V +VMEY + G +++ L + + RQI
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 122
Query: 359 AAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPE 418
+ + Y H K I+HRDLK+ N+L+ + KI+DFG E+ + F G+ + APE
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPE 182
Query: 419 VIRNEQCSD-KIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
+ + ++ ++D+WS G++L+ L++ P+ + + V +P + D
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMST-DCE 241
Query: 478 QLLMKMCWSNAPSSRPSFKQILSH--LDIASQEVLRIQPEPYYKMQMIWKEEIRVH-MLE 534
LL K N PS R + +QI+ +++ ++ + +PY + +K+ R M+
Sbjct: 242 NLLKKFLILN-PSKRGTLEQIMKDRWMNVGHED---DELKPYVEPLPDYKDPRRTELMVS 297
Query: 535 MQANKSHVPKFEEFEDDLIKKRENEL 560
M + EE +D L+ +R NE+
Sbjct: 298 MGYTR------EEIQDSLVGQRYNEV 317
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 50/102 (49%), Gaps = 11/102 (10%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSD-KIDIWYKNRLC 235
+L+ + KI+DFG E+ + F G+ + APE+ + ++ ++D+W +
Sbjct: 144 LLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
Query: 236 FPTSLMA--------RIGEFKSFVLRDEWEIPFESISDLQWL 269
+ +L++ + E + VLR ++ IPF +D + L
Sbjct: 204 Y--TLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENL 243
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 118/249 (47%), Gaps = 21/249 (8%)
Query: 269 LGSGAQGAVFSGK--LRSEIVAVKKVREQK----------ETDIRHLRKLNHPNIVKFKG 316
LG G G V GK L VAVK + QK +I++L+ HP+I+K
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLL-KDG--EEVPPQRLYNWARQIAAGMNYLHSKQIIHR 373
V + +VMEY + G L++ + K+G +E +RL+ +QI +G++Y H ++HR
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLF---QQILSGVDYCHRHMVVHR 140
Query: 374 DLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNE-QCSDKIDIW 432
DLK NVL+ + AKI+DFG ++ G+ + APEVI ++DIW
Sbjct: 141 DLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIW 200
Query: 433 SYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSR 492
S G++L+ LL P+ D + + + P P LL M + P R
Sbjct: 201 SSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTP-QYLNPSVISLLKHMLQVD-PMKR 258
Query: 493 PSFKQILSH 501
+ K I H
Sbjct: 259 ATIKDIREH 267
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 176 GVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNE-QCSDKIDIW 229
VL+ + AKI+DFG ++ G+ + APEVI ++DIW
Sbjct: 146 NVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIW 200
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 96/191 (50%), Gaps = 18/191 (9%)
Query: 270 GSGAQGAVFSGKLRSEIVAVKKV-----------REQKETDIRHLRKLNHPNIVKFKGVC 318
G G G V+ G + + VAVKK+ ++Q + +I+ K H N+V+ G
Sbjct: 31 GEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFS 90
Query: 319 TQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLY---NWARQIAAGMNYLHSKQIIHRDL 375
+ C+V Y G L + L + PP + A+ A G+N+LH IHRD+
Sbjct: 91 SDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHHIHRDI 150
Query: 376 KSPNVLIGSKEEAKISDFGTCR---EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 432
KS N+L+ AKISDFG R ++ GT A+ APE +R E + K DI+
Sbjct: 151 KSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRGE-ITPKSDIY 209
Query: 433 SYGIVLWELLT 443
S+G+VL E++T
Sbjct: 210 SFGVVLLEIIT 220
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 177 VLIGSKEEAKISDFGTCR---EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ AKISDFG R ++ GT A+ APE +R E + K DI+
Sbjct: 155 ILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRGE-ITPKSDIY 209
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 124/255 (48%), Gaps = 21/255 (8%)
Query: 263 ISDLQWLGSGAQGAVFSGKLRSEIVAVK-----KVREQKE--------TD-IRHLRKLNH 308
+ L+ LGSG G V G E ++K KV E K TD + + L+H
Sbjct: 33 LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDH 92
Query: 309 PNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGE-EVPPQRLYNWARQIAAGMNYLHS 367
+IV+ G+C + +V +Y G L + ++ + PQ L NW QIA GM YL
Sbjct: 93 AHIVRLLGLCPGS-SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEE 151
Query: 368 KQIIHRDLKSPNVLIGSKEEAKISDFGTCREW--NNKSTKMSFAGT-VAWMAPEVIRNEQ 424
++HR+L + NVL+ S + +++DFG ++K S A T + WMA E I +
Sbjct: 152 HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGK 211
Query: 425 CSDKIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKM 483
+ + D+WSYG+ +WEL+T PY + A + + L P C ++M
Sbjct: 212 YTHQSDVWSYGVTVWELMTFGAEPYAGL-RLAEVPDLLEKGERLAQPQICTIDVYMVMVK 270
Query: 484 CWSNAPSSRPSFKQI 498
CW + RP+FK++
Sbjct: 271 CWMIDENIRPTFKEL 285
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 103/193 (53%), Gaps = 11/193 (5%)
Query: 269 LGSGAQGA--VFSGKLRSEIVAVK------KVREQKETDIRHLRKLNHPNIVKFKGVCTQ 320
+G+G G + K +E+VAVK K+ E + +I + R L HPNIV+FK V
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 321 APCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNV 380
IVMEY + G L+ + + + +Q+ +G++Y H+ Q+ HRDLK N
Sbjct: 87 PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQVAHRDLKLENT 146
Query: 381 LI-GS-KEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKI-DIWSYGIV 437
L+ GS KI+DFG + S S GT A++APEV+ ++ K+ D+WS G+
Sbjct: 147 LLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVT 206
Query: 438 LWELLTCETPYKD 450
L+ +L P++D
Sbjct: 207 LYVMLVGAYPFED 219
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 186 KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKI-DIW 229
KI+DFG + S S GT A++APEV+ ++ K+ D+W
Sbjct: 157 KIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVW 201
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 124/255 (48%), Gaps = 21/255 (8%)
Query: 263 ISDLQWLGSGAQGAVFSGKLRSEIVAVK-----KVREQKE--------TD-IRHLRKLNH 308
+ L+ LGSG G V G E ++K KV E K TD + + L+H
Sbjct: 15 LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDH 74
Query: 309 PNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGE-EVPPQRLYNWARQIAAGMNYLHS 367
+IV+ G+C + +V +Y G L + ++ + PQ L NW QIA GM YL
Sbjct: 75 AHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEE 133
Query: 368 KQIIHRDLKSPNVLIGSKEEAKISDFGTCREW--NNKSTKMSFAGT-VAWMAPEVIRNEQ 424
++HR+L + NVL+ S + +++DFG ++K S A T + WMA E I +
Sbjct: 134 HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGK 193
Query: 425 CSDKIDIWSYGIVLWELLTCET-PYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKM 483
+ + D+WSYG+ +WEL+T PY + A + + L P C ++M
Sbjct: 194 YTHQSDVWSYGVTVWELMTFGAEPYAGL-RLAEVPDLLEKGERLAQPQICTIDVYMVMVK 252
Query: 484 CWSNAPSSRPSFKQI 498
CW + RP+FK++
Sbjct: 253 CWMIDENIRPTFKEL 267
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 133/266 (50%), Gaps = 15/266 (5%)
Query: 299 DIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQI 358
++R ++ LNHPNIVK V +VMEY + G +++ L + + RQI
Sbjct: 56 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQI 115
Query: 359 AAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPE 418
+ + Y H K I+HRDLK+ N+L+ + KI+DFG E+ + +F G+ + APE
Sbjct: 116 VSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPE 175
Query: 419 VIRNEQCSD-KIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
+ + ++ ++D+WS G++L+ L++ P+ + + V +P + D
Sbjct: 176 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMST-DCE 234
Query: 478 QLLMKMCWSNAPSSRPSFKQILSH--LDIASQEVLRIQPEPYYKMQMIWKEEIRVH-MLE 534
LL K N PS R + +QI+ +++ ++ + +PY + +K+ R M+
Sbjct: 235 NLLKKFLILN-PSKRGTLEQIMKDRWMNVGHED---DELKPYVEPLPDYKDPRRTELMVS 290
Query: 535 MQANKSHVPKFEEFEDDLIKKRENEL 560
M + EE +D L+ +R NE+
Sbjct: 291 MGYTR------EEIQDSLVGQRYNEV 310
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 51/102 (50%), Gaps = 11/102 (10%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSD-KIDIWYKNRLC 235
+L+ + KI+DFG E+ + +F G+ + APE+ + ++ ++D+W +
Sbjct: 137 LLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 196
Query: 236 FPTSLMA--------RIGEFKSFVLRDEWEIPFESISDLQWL 269
+ +L++ + E + VLR ++ IPF +D + L
Sbjct: 197 Y--TLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENL 236
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 121/249 (48%), Gaps = 21/249 (8%)
Query: 269 LGSGAQGAVFSG--KLRSEIVAVKKVREQK----------ETDIRHLRKLNHPNIVKFKG 316
LG G G V G +L VAVK + QK + +I++L+ HP+I+K
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLL-KDG--EEVPPQRLYNWARQIAAGMNYLHSKQIIHR 373
V + + +VMEY + G L++ + K G EE+ +RL+ +QI + ++Y H ++HR
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLF---QQILSAVDYCHRHMVVHR 135
Query: 374 DLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNE-QCSDKIDIW 432
DLK NVL+ + AKI+DFG ++ + G+ + APEVI ++DIW
Sbjct: 136 DLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIW 195
Query: 433 SYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSR 492
S G++L+ LL P+ D + + ++P LLM M + P R
Sbjct: 196 SCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIP-EYLNRSVATLLMHMLQVD-PLKR 253
Query: 493 PSFKQILSH 501
+ K I H
Sbjct: 254 ATIKDIREH 262
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNE-QCSDKIDIW 229
VL+ + AKI+DFG ++ + G+ + APEVI ++DIW
Sbjct: 142 VLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIW 195
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 102/193 (52%), Gaps = 11/193 (5%)
Query: 269 LGSGAQGA--VFSGKLRSEIVAVK------KVREQKETDIRHLRKLNHPNIVKFKGVCTQ 320
+GSG G + K +E+VAVK K+ E + +I + R L HPNIV+FK V
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 85
Query: 321 APCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNV 380
IVMEY + G L+ + + + +Q+ +G++Y H+ Q+ HRDLK N
Sbjct: 86 PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENT 145
Query: 381 LI-GS-KEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKI-DIWSYGIV 437
L+ GS KI DFG + S S GT A++APEV+ ++ K+ D+WS G+
Sbjct: 146 LLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVT 205
Query: 438 LWELLTCETPYKD 450
L+ +L P++D
Sbjct: 206 LYVMLVGAYPFED 218
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 186 KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKI-DIW 229
KI DFG + S S GT A++APEV+ ++ K+ D+W
Sbjct: 156 KICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVW 200
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 113/221 (51%), Gaps = 6/221 (2%)
Query: 291 KVREQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQ- 349
K RE+ ++ L + HPNIV+++ + IVM+YC G L+ + + V Q
Sbjct: 65 KEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQE 124
Query: 350 -RLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSF 408
++ +W QI + ++H ++I+HRD+KS N+ + ++ DFG R N+ + +++
Sbjct: 125 DQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS-TVELAR 183
Query: 409 A--GTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLH 466
A GT +++PE+ N+ ++K DIW+ G VL+EL T + ++ ++ + S S
Sbjct: 184 ACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFP 243
Query: 467 LPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLDIASQ 507
P+ + L+ + P RPS IL IA +
Sbjct: 244 -PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKR 283
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Query: 185 AKISDFGTCREWNNKSTKMSFA--GTVAWMAPEVIRNEQCSDKIDIW 229
++ DFG R N+ + +++ A GT +++PE+ N+ ++K DIW
Sbjct: 164 VQLGDFGIARVLNS-TVELARACIGTPYYLSPEICENKPYNNKSDIW 209
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 118/250 (47%), Gaps = 22/250 (8%)
Query: 272 GAQGAVFSGKLR-SEIVAVKKVREQKE--------TDIRHLRKLNHPNIVKFKGVCTQAP 322
G G V+ + + + ++A KV + K +I L +HPNIVK
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 80
Query: 323 CYCIVMEYCAYGPLYNLLKDGEE-VPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVL 381
I++E+CA G + ++ + E + ++ +Q +NYLH +IIHRDLK+ N+L
Sbjct: 81 NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNIL 140
Query: 382 IGSKEEAKISDFGTCREWNNKSTKM----SFAGTVAWMAPEVIRNEQCSD-----KIDIW 432
+ K++DFG + N T + SF GT WMAPEV+ E D K D+W
Sbjct: 141 FTLDGDIKLADFGVSAK--NTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVW 198
Query: 433 SYGIVLWELLTCETPYKDVDSSAIIWGVGSSS-LHLPIPSTCPDGFQLLMKMCWSNAPSS 491
S GI L E+ E P+ +++ ++ + S L PS F+ +K C +
Sbjct: 199 SLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDA 258
Query: 492 RPSFKQILSH 501
R + Q+L H
Sbjct: 259 RWTTSQLLQH 268
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 11/63 (17%)
Query: 176 GVLIGSKEEAKISDFGTCREWNNKSTKM----SFAGTVAWMAPEVIRNEQCSD-----KI 226
+L + K++DFG + N T + SF GT WMAPEV+ E D K
Sbjct: 138 NILFTLDGDIKLADFGVSAK--NTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKA 195
Query: 227 DIW 229
D+W
Sbjct: 196 DVW 198
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 120/249 (48%), Gaps = 21/249 (8%)
Query: 269 LGSGAQGAVFSG--KLRSEIVAVKKVREQK----------ETDIRHLRKLNHPNIVKFKG 316
LG G G V G +L VAVK + QK + +I++L+ HP+I+K
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLL-KDG--EEVPPQRLYNWARQIAAGMNYLHSKQIIHR 373
V + + +VMEY + G L++ + K G EE+ +RL+ +QI + ++Y H ++HR
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLF---QQILSAVDYCHRHMVVHR 135
Query: 374 DLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNE-QCSDKIDIW 432
DLK NVL+ + AKI+DFG ++ G+ + APEVI ++DIW
Sbjct: 136 DLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIW 195
Query: 433 SYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSR 492
S G++L+ LL P+ D + + ++P LLM M + P R
Sbjct: 196 SCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIP-EYLNRSVATLLMHMLQVD-PLKR 253
Query: 493 PSFKQILSH 501
+ K I H
Sbjct: 254 ATIKDIREH 262
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNE-QCSDKIDIW 229
VL+ + AKI+DFG ++ G+ + APEVI ++DIW
Sbjct: 142 VLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIW 195
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 105/204 (51%), Gaps = 7/204 (3%)
Query: 299 DIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQI 358
++R ++ LNHPNIVK V ++MEY + G +++ L + + + RQI
Sbjct: 61 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQI 120
Query: 359 AAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPE 418
+ + Y H K+I+HRDLK+ N+L+ + KI+DFG E+ +F G+ + APE
Sbjct: 121 VSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPE 180
Query: 419 VIRNEQCSD-KIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLP--IPSTCPD 475
+ + ++ ++D+WS G++L+ L++ P+ + + V +P + + C +
Sbjct: 181 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCEN 240
Query: 476 GFQLLMKMCWSNAPSSRPSFKQIL 499
L+K P R + +QI+
Sbjct: 241 ----LLKRFLVLNPIKRGTLEQIM 260
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 50/102 (49%), Gaps = 11/102 (10%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSD-KIDIWYKNRLC 235
+L+ + KI+DFG E+ +F G+ + APE+ + ++ ++D+W +
Sbjct: 142 LLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 201
Query: 236 FPTSLMA--------RIGEFKSFVLRDEWEIPFESISDLQWL 269
+ +L++ + E + VLR ++ IPF +D + L
Sbjct: 202 Y--TLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENL 241
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 120/260 (46%), Gaps = 38/260 (14%)
Query: 269 LGSGAQGAVFSGKLRSE-----IVAVKKVR---------EQKETDIRHLRKLNHPNIVKF 314
LG G G+V G L+ E VAVK ++ E+ ++ ++ +HPN+++
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 315 KGVCTQA-----PCYCIVMEYCAYGPL-----YNLLKDG-EEVPPQRLYNWARQIAAGMN 363
GVC + P +++ + YG L Y+ L+ G + +P Q L + IA GM
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREW-------NNKSTKMSFAGTVAWMA 416
YL ++ +HRDL + N ++ ++DFG ++ + KM V W+A
Sbjct: 162 YLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMP----VKWIA 217
Query: 417 PEVIRNEQCSDKIDIWSYGIVLWELLT-CETPYKDVDSSAIIWGVGSSSLHLPIPSTCPD 475
E + + + K D+W++G+ +WE+ T TPY V + ++ L P C D
Sbjct: 218 IESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE-MYDYLLHGHRLKQPEDCLD 276
Query: 476 GFQLLMKMCWSNAPSSRPSF 495
+M CW P RP+F
Sbjct: 277 ELYEIMYSCWRTDPLDRPTF 296
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 113/253 (44%), Gaps = 23/253 (9%)
Query: 269 LGSGAQGAVF-----SGKLRSEIVAVKKVR-----EQKETDIRHLRKLNHPNIVKFKGVC 318
LGSGA G V S L I + K R EQ E +I L+ L+HPNI+K V
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 319 TQAPCYCIVMEYCAYGPLYNLL----KDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRD 374
IVME C G L + G+ + + +Q+ + Y HS+ ++H+D
Sbjct: 90 EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKD 149
Query: 375 LKSPNVLI---GSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDI 431
LK N+L KI DFG + + + AGT +MAPEV + + + K DI
Sbjct: 150 LKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRD-VTFKCDI 208
Query: 432 WSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPI---PSTCPDGFQLLMKMCWSNA 488
WS G+V++ LLT P+ + + + P T P LL +M +
Sbjct: 209 WSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLT-PQAVDLLKQMLTKD- 266
Query: 489 PSSRPSFKQILSH 501
P RPS Q+L H
Sbjct: 267 PERRPSAAQVLHH 279
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 186 KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
KI DFG + + + AGT +MAPEV + + + K DIW
Sbjct: 167 KIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRD-VTFKCDIW 209
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 122/264 (46%), Gaps = 27/264 (10%)
Query: 260 FESISDLQWLGSGAQGAVFSGKLR-SEIVAVKK---------VREQKETDIRHLRKLNHP 309
FE IS+L G+G G VF + S +V +K +R Q +++ L + N P
Sbjct: 8 FEKISEL---GAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 64
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK- 368
IV F G I ME+ G L +LK +P Q L + + G+ YL K
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 369 QIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDK 428
+I+HRD+K N+L+ S+ E K+ DFG + + S SF GT ++M+PE ++ S +
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQGTHYSVQ 183
Query: 429 IDIWSYGIVLWELLTCETPYKDVDSS------AIIWGVGSSSLHLPIPSTCPDG-----F 477
DIWS G+ L E+ P D+ I+ + ++ P P P G F
Sbjct: 184 SDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEP-PPKLPSGVFSLEF 242
Query: 478 QLLMKMCWSNAPSSRPSFKQILSH 501
Q + C P+ R KQ++ H
Sbjct: 243 QDFVNKCLIKNPAERADLKQLMVH 266
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ S+ E K+ DFG + + S SF GT ++M+PE ++ S + DIW
Sbjct: 136 ILVNSRGEIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQGTHYSVQSDIW 187
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 104/204 (50%), Gaps = 7/204 (3%)
Query: 299 DIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQI 358
++R ++ LNHPNIVK V ++MEY + G +++ L + + + RQI
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQI 123
Query: 359 AAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPE 418
+ + Y H K+I+HRDLK+ N+L+ + KI+DFG E+ +F G + APE
Sbjct: 124 VSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPE 183
Query: 419 VIRNEQCSD-KIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLP--IPSTCPD 475
+ + ++ ++D+WS G++L+ L++ P+ + + V +P + + C +
Sbjct: 184 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCEN 243
Query: 476 GFQLLMKMCWSNAPSSRPSFKQIL 499
L+K P R + +QI+
Sbjct: 244 ----LLKRFLVLNPIKRGTLEQIM 263
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSD-KIDIWYKNRLC 235
+L+ + KI+DFG E+ +F G + APE+ + ++ ++D+W +
Sbjct: 145 LLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVIL 204
Query: 236 FPTSLMA--------RIGEFKSFVLRDEWEIPFESISDLQWL 269
+ +L++ + E + VLR ++ IPF +D + L
Sbjct: 205 Y--TLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENL 244
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 125/263 (47%), Gaps = 22/263 (8%)
Query: 260 FESISD----LQWLGSGAQGAVF--SGKLRSEIVAVKKVREQKET----------DIRHL 303
F+ +SD ++ LGSGA G V KL A+K +++ T ++ L
Sbjct: 16 FQGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVL 75
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMN 363
++L+HPNI+K Y +VME G L++ + ++ +Q+ +G
Sbjct: 76 KQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTT 135
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEE---AKISDFGTCREWNNKSTKMSFAGTVAWMAPEVI 420
YLH I+HRDLK N+L+ SK KI DFG + GT ++APEV+
Sbjct: 136 YLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL 195
Query: 421 RNEQCSDKIDIWSYGIVLWELLTCETPYKDVDSSAIIWGV--GSSSLHLPIPSTCPDGFQ 478
R ++ +K D+WS G++L+ LL P+ I+ V G S P + D +
Sbjct: 196 R-KKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAK 254
Query: 479 LLMKMCWSNAPSSRPSFKQILSH 501
L+K+ + PS R S ++ L+H
Sbjct: 255 QLVKLMLTYEPSKRISAEEALNH 277
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 186 KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
KI DFG + GT ++APEV+R ++ +K D+W
Sbjct: 164 KIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLR-KKYDEKCDVW 206
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 114/232 (49%), Gaps = 23/232 (9%)
Query: 284 SEIVAVKKVR----EQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNL 339
++I+ KK+ ++ E + R RKL HPNIV+ + + +V + G L+
Sbjct: 59 AKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELF-- 116
Query: 340 LKDGEEVPPQRLYNWA------RQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEA---KI 390
E++ + Y+ A +QI + Y HS I+HR+LK N+L+ SK + K+
Sbjct: 117 ----EDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKL 172
Query: 391 SDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKD 450
+DFG E N+ FAGT +++PEV++ + S +DIW+ G++L+ LL P+ D
Sbjct: 173 ADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 232
Query: 451 VDSSAIIWGVGSSSLHLPIP---STCPDGFQLLMKMCWSNAPSSRPSFKQIL 499
D + + + + P P + P+ L+ M N P R + Q L
Sbjct: 233 EDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVN-PKKRITADQAL 283
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 177 VLIGSKEEA---KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ SK + K++DFG E N+ FAGT +++PEV++ + S +DIW
Sbjct: 159 LLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIW 214
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 101/193 (52%), Gaps = 11/193 (5%)
Query: 269 LGSGAQGA--VFSGKLRSEIVAVK------KVREQKETDIRHLRKLNHPNIVKFKGVCTQ 320
+GSG G + K +E+VAVK K+ + +I + R L HPNIV+FK V
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVILT 86
Query: 321 APCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNV 380
IVMEY + G L+ + + + +Q+ +G++Y H+ Q+ HRDLK N
Sbjct: 87 PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENT 146
Query: 381 LI-GS-KEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKI-DIWSYGIV 437
L+ GS KI DFG + S S GT A++APEV+ ++ K+ D+WS G+
Sbjct: 147 LLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVT 206
Query: 438 LWELLTCETPYKD 450
L+ +L P++D
Sbjct: 207 LYVMLVGAYPFED 219
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 186 KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKI-DIW 229
KI DFG + S S GT A++APEV+ ++ K+ D+W
Sbjct: 157 KICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVW 201
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 118/250 (47%), Gaps = 18/250 (7%)
Query: 269 LGSGAQGAVF--SGKLRSEIVAVKKVREQKET----------DIRHLRKLNHPNIVKFKG 316
LGSGA G V KL A+K +++ T ++ L++L+HPNI+K
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 71
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLK 376
Y +VME G L++ + ++ +Q+ +G YLH I+HRDLK
Sbjct: 72 FFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLK 131
Query: 377 SPNVLIGSKEE---AKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWS 433
N+L+ SK KI DFG + GT ++APEV+R ++ +K D+WS
Sbjct: 132 PENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLR-KKYDEKCDVWS 190
Query: 434 YGIVLWELLTCETPYKDVDSSAIIWGV--GSSSLHLPIPSTCPDGFQLLMKMCWSNAPSS 491
G++L+ LL P+ I+ V G S P + D + L+K+ + PS
Sbjct: 191 CGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSK 250
Query: 492 RPSFKQILSH 501
R S ++ L+H
Sbjct: 251 RISAEEALNH 260
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 186 KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
KI DFG + GT ++APEV+R ++ +K D+W
Sbjct: 147 KIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLR-KKYDEKCDVW 189
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 98/194 (50%), Gaps = 14/194 (7%)
Query: 269 LGSGAQGAVFSGK--LRSEIVAVKKV----REQKET------DIRHLRKLNHPNIVKFKG 316
LG G V+ + + + VA+K + RE++ET ++ + +L+H NIV
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLK 376
V + CY +VMEY L ++ + N+ QI G+ + H +I+HRD+K
Sbjct: 79 VDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIK 138
Query: 377 SPNVLIGSKEEAKISDFGTCREWNNKSTKMS--FAGTVAWMAPEVIRNEQCSDKIDIWSY 434
N+LI S + KI DFG + + S + GTV + +PE + E + DI+S
Sbjct: 139 PQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSI 198
Query: 435 GIVLWELLTCETPY 448
GIVL+E+L E P+
Sbjct: 199 GIVLYEMLVGEPPF 212
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMS--FAGTVAWMAPEVIRNEQCSDKIDIW 229
+LI S + KI DFG + + S + GTV + +PE + E + DI+
Sbjct: 142 ILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIY 196
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 115/235 (48%), Gaps = 23/235 (9%)
Query: 281 KLRSEIVAVKKVR----EQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPL 336
+ ++I+ KK+ ++ E + R RKL HPNIV+ + + +V + G L
Sbjct: 33 EFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL 92
Query: 337 YNLLKDGEEVPPQRLYNWA------RQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEA-- 388
+ E++ + Y+ A +QI + Y HS I+HR+LK N+L+ SK +
Sbjct: 93 F------EDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAA 146
Query: 389 -KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETP 447
K++DFG E N+ FAGT +++PEV++ + S +DIW+ G++L+ LL P
Sbjct: 147 VKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
Query: 448 YKDVDSSAIIWGVGSSSLHLPIP---STCPDGFQLLMKMCWSNAPSSRPSFKQIL 499
+ D D + + + + P P + P+ L+ M N P R + Q L
Sbjct: 207 FWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVN-PKKRITADQAL 260
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 177 VLIGSKEEA---KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ SK + K++DFG E N+ FAGT +++PEV++ + S +DIW
Sbjct: 136 LLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIW 191
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 114/232 (49%), Gaps = 23/232 (9%)
Query: 284 SEIVAVKKVR----EQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNL 339
++I+ KK+ ++ E + R RKL HPNIV+ + + +V + G L+
Sbjct: 36 AKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELF-- 93
Query: 340 LKDGEEVPPQRLYNWA------RQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEA---KI 390
E++ + Y+ A +QI + Y HS I+HR+LK N+L+ SK + K+
Sbjct: 94 ----EDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKL 149
Query: 391 SDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKD 450
+DFG E N+ FAGT +++PEV++ + S +DIW+ G++L+ LL P+ D
Sbjct: 150 ADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 209
Query: 451 VDSSAIIWGVGSSSLHLPIP---STCPDGFQLLMKMCWSNAPSSRPSFKQIL 499
D + + + + P P + P+ L+ M N P R + Q L
Sbjct: 210 EDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVN-PKKRITADQAL 260
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 177 VLIGSKEEA---KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ SK + K++DFG E N+ FAGT +++PEV++ + S +DIW
Sbjct: 136 LLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIW 191
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 114/232 (49%), Gaps = 23/232 (9%)
Query: 284 SEIVAVKKVR----EQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNL 339
++I+ KK+ ++ E + R RKL HPNIV+ + + +V + G L+
Sbjct: 35 AKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELF-- 92
Query: 340 LKDGEEVPPQRLYNWA------RQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEA---KI 390
E++ + Y+ A +QI + Y HS I+HR+LK N+L+ SK + K+
Sbjct: 93 ----EDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKL 148
Query: 391 SDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKD 450
+DFG E N+ FAGT +++PEV++ + S +DIW+ G++L+ LL P+ D
Sbjct: 149 ADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 208
Query: 451 VDSSAIIWGVGSSSLHLPIP---STCPDGFQLLMKMCWSNAPSSRPSFKQIL 499
D + + + + P P + P+ L+ M N P R + Q L
Sbjct: 209 EDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVN-PKKRITADQAL 259
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 177 VLIGSKEEA---KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ SK + K++DFG E N+ FAGT +++PEV++ + S +DIW
Sbjct: 135 LLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIW 190
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 126/264 (47%), Gaps = 22/264 (8%)
Query: 258 IPFESISDLQWLGSGAQGAVFSGKLRSEIVAVK--KVRE---QKETDIR----HLRKLNH 308
I F+ ++ L L G ++ G+ + + VK KVR+ +K D LR +H
Sbjct: 7 IDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 309 PNIVKFKGVCTQ--APCYCIVMEYCAYGPLYNLLKDGEE--VPPQRLYNWARQIAAGMNY 364
PN++ G C AP ++ + YG LYN+L +G V + +A +A GM +
Sbjct: 67 PNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAF 126
Query: 365 LHSKQ--IIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRN 422
LH+ + I L S +V+I A+IS +++ +S +A AW+APE ++
Sbjct: 127 LHTLEPLIPRHALNSRSVMIDEDMTARISMADV--KFSFQSPGRMYAP--AWVAPEALQK 182
Query: 423 ---EQCSDKIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQL 479
+ D+WS+ ++LWEL+T E P+ D+ + I V L IP
Sbjct: 183 KPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVSK 242
Query: 480 LMKMCWSNAPSSRPSFKQILSHLD 503
LMK+C + P+ RP F I+ L+
Sbjct: 243 LMKICMNEDPAKRPKFDMIVPILE 266
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 101/193 (52%), Gaps = 11/193 (5%)
Query: 269 LGSGAQGA--VFSGKLRSEIVAVK------KVREQKETDIRHLRKLNHPNIVKFKGVCTQ 320
+GSG G + K +E+VAVK K+ E + +I + R L HPNIV+FK V
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 321 APCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNV 380
IVMEY + G L+ + + + +Q+ +G++Y H+ Q+ HRDLK N
Sbjct: 87 PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENT 146
Query: 381 LI-GS-KEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKI-DIWSYGIV 437
L+ GS KI FG + S S GT A++APEV+ ++ K+ D+WS G+
Sbjct: 147 LLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVT 206
Query: 438 LWELLTCETPYKD 450
L+ +L P++D
Sbjct: 207 LYVMLVGAYPFED 219
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 139/300 (46%), Gaps = 31/300 (10%)
Query: 245 GEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVF-----SGKLRSEIVAVKKVRE----Q 295
G ++ V R +I E L+ LG G G VF +G +I A+K +++ +
Sbjct: 1 GSSETSVNRGPEKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVR 60
Query: 296 KETDIRH-------LRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLY-NLLKDGEEVP 347
D H L ++ HP IV +++EY + G L+ L ++G +
Sbjct: 61 NAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFME 120
Query: 348 PQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCRE-WNNKSTKM 406
+ A +I+ + +LH K II+RDLK N+++ + K++DFG C+E ++ +
Sbjct: 121 DTACFYLA-EISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTH 179
Query: 407 SFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLH 466
+F GT+ +MAPE++ + +D WS G +++++LT P+ + I + L+
Sbjct: 180 TFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLN 239
Query: 467 LPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLDIASQEVLRIQPEPYYKMQMIWKE 526
LP P + LL K+ NA S L + +Q P+++ + W+E
Sbjct: 240 LP-PYLTQEARDLLKKLLKRNAA----------SRLGAGPGDAGEVQAHPFFR-HINWEE 287
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 177 VLIGSKEEAKISDFGTCRE-WNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNRLC 235
+++ + K++DFG C+E ++ + +F GT+ +MAPE++ + +D W L
Sbjct: 152 IMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALM 211
Query: 236 F 236
+
Sbjct: 212 Y 212
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 113/227 (49%), Gaps = 6/227 (2%)
Query: 277 VFSGKLRSEIVAVK-KVREQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGP 335
VF+GK+ + + +K RE+ +I R L H ++V F G +V+E C
Sbjct: 42 VFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRS 101
Query: 336 LYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFG- 394
L L K + + + RQI G YLH ++IHRDLK N+ + E KI DFG
Sbjct: 102 LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 161
Query: 395 -TCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVDS 453
T E++ + K+ GT ++APEV+ + S ++D+WS G +++ LL + P++
Sbjct: 162 ATKVEYDGERKKV-LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL 220
Query: 454 SAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILS 500
+ + +P P L+ KM ++ P++RP+ ++L+
Sbjct: 221 KETYLRIKKNEYSIP-KHINPVAASLIQKMLQTD-PTARPTINELLN 265
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 184 EAKISDFG--TCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNRLCFPTSLM 241
E KI DFG T E++ + K+ GT ++APEV+ + S ++D+W C +L+
Sbjct: 153 EVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKGHSFEVDVWSIG--CIMYTLL 209
Query: 242 ARIGEFKSFVLRDEW 256
F++ L++ +
Sbjct: 210 VGKPPFETSCLKETY 224
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 113/227 (49%), Gaps = 6/227 (2%)
Query: 277 VFSGKLRSEIVAVK-KVREQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGP 335
VF+GK+ + + +K RE+ +I R L H ++V F G +V+E C
Sbjct: 44 VFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRS 103
Query: 336 LYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFG- 394
L L K + + + RQI G YLH ++IHRDLK N+ + E KI DFG
Sbjct: 104 LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 163
Query: 395 -TCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVDS 453
T E++ + K + GT ++APEV+ + S ++D+WS G +++ LL + P++
Sbjct: 164 ATKVEYDGERKK-TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL 222
Query: 454 SAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILS 500
+ + +P P L+ KM ++ P++RP+ ++L+
Sbjct: 223 KETYLRIKKNEYSIP-KHINPVAASLIQKMLQTD-PTARPTINELLN 267
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 184 EAKISDFG--TCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNRLCFPTSLM 241
E KI DFG T E++ + K + GT ++APEV+ + S ++D+W C +L+
Sbjct: 155 EVKIGDFGLATKVEYDGERKK-TLCGTPNYIAPEVLSKKGHSFEVDVWSIG--CIMYTLL 211
Query: 242 ARIGEFKSFVLRDEW 256
F++ L++ +
Sbjct: 212 VGKPPFETSCLKETY 226
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 110/229 (48%), Gaps = 12/229 (5%)
Query: 284 SEIVAVKKV----REQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNL 339
++I+ KK+ ++ E + R R L HPNIV+ ++ + +V + G L+
Sbjct: 61 AKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFED 120
Query: 340 LKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSK---EEAKISDFGTC 396
+ E + QI +N++H I+HRDLK N+L+ SK K++DFG
Sbjct: 121 IVAREYYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA 180
Query: 397 REWNNKSTK-MSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVDSSA 455
E + FAGT +++PEV+R + +DIW+ G++L+ LL P+ D D
Sbjct: 181 IEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHK 240
Query: 456 IIWGVGSSSLHLPIP---STCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
+ + + + P P + P+ L+ +M N P+ R + Q L H
Sbjct: 241 LYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTIN-PAKRITADQALKH 288
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 177 VLIGSK---EEAKISDFGTCREWNNKSTK-MSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ SK K++DFG E + FAGT +++PEV+R + +DIW
Sbjct: 161 LLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIW 217
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 113/227 (49%), Gaps = 6/227 (2%)
Query: 277 VFSGKLRSEIVAVK-KVREQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGP 335
VF+GK+ + + +K RE+ +I R L H ++V F G +V+E C
Sbjct: 44 VFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRS 103
Query: 336 LYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFG- 394
L L K + + + RQI G YLH ++IHRDLK N+ + E KI DFG
Sbjct: 104 LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 163
Query: 395 -TCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVDS 453
T E++ + K + GT ++APEV+ + S ++D+WS G +++ LL + P++
Sbjct: 164 ATKVEYDGERKK-TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL 222
Query: 454 SAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILS 500
+ + +P P L+ KM ++ P++RP+ ++L+
Sbjct: 223 KETYLRIKKNEYSIP-KHINPVAASLIQKMLQTD-PTARPTINELLN 267
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 184 EAKISDFG--TCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNRLCFPTSLM 241
E KI DFG T E++ + K + GT ++APEV+ + S ++D+W C +L+
Sbjct: 155 EVKIGDFGLATKVEYDGERKK-TLCGTPNYIAPEVLSKKGHSFEVDVWSIG--CIMYTLL 211
Query: 242 ARIGEFKSFVLRDEW 256
F++ L++ +
Sbjct: 212 VGKPPFETSCLKETY 226
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 113/227 (49%), Gaps = 6/227 (2%)
Query: 277 VFSGKLRSEIVAVK-KVREQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGP 335
VF+GK+ + + +K RE+ +I R L H ++V F G +V+E C
Sbjct: 66 VFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRS 125
Query: 336 LYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFG- 394
L L K + + + RQI G YLH ++IHRDLK N+ + E KI DFG
Sbjct: 126 LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 185
Query: 395 -TCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVDS 453
T E++ + K+ GT ++APEV+ + S ++D+WS G +++ LL + P++
Sbjct: 186 ATKVEYDGERKKV-LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL 244
Query: 454 SAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILS 500
+ + +P P L+ KM ++ P++RP+ ++L+
Sbjct: 245 KETYLRIKKNEYSIP-KHINPVAASLIQKMLQTD-PTARPTINELLN 289
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 184 EAKISDFG--TCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNRLCFPTSLM 241
E KI DFG T E++ + K+ GT ++APEV+ + S ++D+W C +L+
Sbjct: 177 EVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKGHSFEVDVWSIG--CIMYTLL 233
Query: 242 ARIGEFKSFVLRDEW 256
F++ L++ +
Sbjct: 234 VGKPPFETSCLKETY 248
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 113/227 (49%), Gaps = 6/227 (2%)
Query: 277 VFSGKLRSEIVAVK-KVREQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGP 335
VF+GK+ + + +K RE+ +I R L H ++V F G +V+E C
Sbjct: 48 VFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRS 107
Query: 336 LYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFG- 394
L L K + + + RQI G YLH ++IHRDLK N+ + E KI DFG
Sbjct: 108 LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 167
Query: 395 -TCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVDS 453
T E++ + K + GT ++APEV+ + S ++D+WS G +++ LL + P++
Sbjct: 168 ATKVEYDGERKK-TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL 226
Query: 454 SAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILS 500
+ + +P P L+ KM ++ P++RP+ ++L+
Sbjct: 227 KETYLRIKKNEYSIP-KHINPVAASLIQKMLQTD-PTARPTINELLN 271
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 184 EAKISDFG--TCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNRLCFPTSLM 241
E KI DFG T E++ + K + GT ++APEV+ + S ++D+W C +L+
Sbjct: 159 EVKIGDFGLATKVEYDGERKK-TLCGTPNYIAPEVLSKKGHSFEVDVWSIG--CIMYTLL 215
Query: 242 ARIGEFKSFVLRDEW 256
F++ L++ +
Sbjct: 216 VGKPPFETSCLKETY 230
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 126/286 (44%), Gaps = 24/286 (8%)
Query: 266 LQWLGSGAQGAVF------SGK------LRSEIVAVKKVREQKETDIRHLRKLNHPNIVK 313
L+ LG G G V +G+ L+ E++ K T+ R L+ HP +
Sbjct: 156 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTA 215
Query: 314 FKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHS-KQIIH 372
K C VMEY G L+ L R + +I + ++YLHS K +++
Sbjct: 216 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVY 275
Query: 373 RDLKSPNVLIGSKEEAKISDFGTCREW-NNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDI 431
RDLK N+++ KI+DFG C+E + +T +F GT ++APEV+ + +D
Sbjct: 276 RDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDW 335
Query: 432 WSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSS 491
W G+V++E++ P+ + D + + + P + P+ LL + + P
Sbjct: 336 WGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP-RTLGPEAKSLLSGLLKKD-PKQ 393
Query: 492 R-----PSFKQILSHLDIAS---QEVLRIQPEPYYKMQMIWKEEIR 529
R K+I+ H A Q V + P +K Q+ + + R
Sbjct: 394 RLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTR 439
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 186 KISDFGTCREW-NNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
KI+DFG C+E + +T +F GT ++APEV+ + +D W
Sbjct: 292 KITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWW 336
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 138/300 (46%), Gaps = 31/300 (10%)
Query: 245 GEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVF-----SGKLRSEIVAVKKVRE----Q 295
G ++ V R +I E L+ LG G G VF +G +I A+K +++ +
Sbjct: 1 GSSETSVNRGPEKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVR 60
Query: 296 KETDIRH-------LRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLY-NLLKDGEEVP 347
D H L ++ HP IV +++EY + G L+ L ++G +
Sbjct: 61 NAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFME 120
Query: 348 PQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCRE-WNNKSTKM 406
+ A +I+ + +LH K II+RDLK N+++ + K++DFG C+E ++ +
Sbjct: 121 DTACFYLA-EISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTH 179
Query: 407 SFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLH 466
F GT+ +MAPE++ + +D WS G +++++LT P+ + I + L+
Sbjct: 180 XFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLN 239
Query: 467 LPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLDIASQEVLRIQPEPYYKMQMIWKE 526
LP P + LL K+ NA S L + +Q P+++ + W+E
Sbjct: 240 LP-PYLTQEARDLLKKLLKRNAA----------SRLGAGPGDAGEVQAHPFFR-HINWEE 287
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 177 VLIGSKEEAKISDFGTCRE-WNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNRLC 235
+++ + K++DFG C+E ++ + F GT+ +MAPE++ + +D W L
Sbjct: 152 IMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALM 211
Query: 236 F 236
+
Sbjct: 212 Y 212
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 128/294 (43%), Gaps = 24/294 (8%)
Query: 266 LQWLGSGAQGAVF------SGK------LRSEIVAVKKVREQKETDIRHLRKLNHPNIVK 313
L+ LG G G V +G+ L+ E++ K T+ R L+ HP +
Sbjct: 153 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTA 212
Query: 314 FKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHS-KQIIH 372
K C VMEY G L+ L R + +I + ++YLHS K +++
Sbjct: 213 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVY 272
Query: 373 RDLKSPNVLIGSKEEAKISDFGTCREW-NNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDI 431
RDLK N+++ KI+DFG C+E + +T +F GT ++APEV+ + +D
Sbjct: 273 RDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDW 332
Query: 432 WSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSS 491
W G+V++E++ P+ + D + + + P + P+ LL + + P
Sbjct: 333 WGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP-RTLGPEAKSLLSGLLKKD-PKQ 390
Query: 492 R-----PSFKQILSHLDIAS---QEVLRIQPEPYYKMQMIWKEEIRVHMLEMQA 537
R K+I+ H A Q V + P +K Q+ + + R E A
Sbjct: 391 RLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDEEFTA 444
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 186 KISDFGTCREW-NNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
KI+DFG C+E + +T +F GT ++APEV+ + +D W
Sbjct: 289 KITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWW 333
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 84/151 (55%), Gaps = 1/151 (0%)
Query: 299 DIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQI 358
++R ++ LNHPNIVK V +VMEY + G +++ L + + RQI
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 123
Query: 359 AAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPE 418
+ + Y H K I+HRDLK+ N+L+ KI+DFG E+ + +F G+ + APE
Sbjct: 124 VSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPE 183
Query: 419 VIRNEQCSD-KIDIWSYGIVLWELLTCETPY 448
+ + ++ ++D+WS G++L+ L++ P+
Sbjct: 184 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 214
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 48/98 (48%), Gaps = 11/98 (11%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSD-KIDIWYKNRLC 235
+L+ KI+DFG E+ + +F G+ + APE+ + ++ ++D+W +
Sbjct: 145 LLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 204
Query: 236 FPTSLMA--------RIGEFKSFVLRDEWEIPFESISD 265
+ +L++ + E + VLR ++ IPF +D
Sbjct: 205 Y--TLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTD 240
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 113/227 (49%), Gaps = 6/227 (2%)
Query: 277 VFSGKLRSEIVAVK-KVREQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGP 335
VF+GK+ + + +K RE+ +I R L H ++V F G +V+E C
Sbjct: 68 VFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRS 127
Query: 336 LYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFG- 394
L L K + + + RQI G YLH ++IHRDLK N+ + E KI DFG
Sbjct: 128 LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 187
Query: 395 -TCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVDS 453
T E++ + K+ GT ++APEV+ + S ++D+WS G +++ LL + P++
Sbjct: 188 ATKVEYDGERKKV-LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL 246
Query: 454 SAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILS 500
+ + +P P L+ KM ++ P++RP+ ++L+
Sbjct: 247 KETYLRIKKNEYSIP-KHINPVAASLIQKMLQTD-PTARPTINELLN 291
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 184 EAKISDFG--TCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNRLCFPTSLM 241
E KI DFG T E++ + K+ GT ++APEV+ + S ++D+W C +L+
Sbjct: 179 EVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKGHSFEVDVWSIG--CIMYTLL 235
Query: 242 ARIGEFKSFVLRDEW 256
F++ L++ +
Sbjct: 236 VGKPPFETSCLKETY 250
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 120/255 (47%), Gaps = 29/255 (11%)
Query: 269 LGSGAQGAVFSGKLRSEIV--AVKKVREQKET---------DIRHLRKLNHPNIVKFKGV 317
LGSGA G V + + V A+K +R+ + ++ L+ L+HPNI+K
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF 104
Query: 318 CTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWA------RQIAAGMNYLHSKQII 371
Y +VME G L++ E+ + +N +Q+ +G+ YLH I+
Sbjct: 105 FEDKRNYYLVMECYKGGELFD------EIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIV 158
Query: 372 HRDLKSPNVLIGSKEE---AKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDK 428
HRDLK N+L+ SKE+ KI DFG + N+ GT ++APEV+R ++ +K
Sbjct: 159 HRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLR-KKYDEK 217
Query: 429 IDIWSYGIVLWELLTCETPYKDVDSSAIIWGV--GSSSLHLPIPSTCPDGFQLLMKMCWS 486
D+WS G++L+ LL P+ I+ V G + P +G + L+K
Sbjct: 218 CDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQ 277
Query: 487 NAPSSRPSFKQILSH 501
R S +Q L H
Sbjct: 278 FDSQRRISAQQALEH 292
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 177 VLIGSKEE---AKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+ SKE+ KI DFG + N+ GT ++APEV+R ++ +K D+W
Sbjct: 167 LLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGV 225
Query: 234 LCF 236
+ F
Sbjct: 226 ILF 228
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 127/294 (43%), Gaps = 24/294 (8%)
Query: 266 LQWLGSGAQGAVF------SGK------LRSEIVAVKKVREQKETDIRHLRKLNHPNIVK 313
L+ LG G G V +G+ L+ E++ K T+ R L+ HP +
Sbjct: 13 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTA 72
Query: 314 FKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHS-KQIIH 372
K C VMEY G L+ L R + +I + ++YLHS K +++
Sbjct: 73 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVY 132
Query: 373 RDLKSPNVLIGSKEEAKISDFGTCREW-NNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDI 431
RDLK N+++ KI+DFG C+E + +T F GT ++APEV+ + +D
Sbjct: 133 RDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDW 192
Query: 432 WSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSS 491
W G+V++E++ P+ + D + + + P + P+ LL + + P
Sbjct: 193 WGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP-RTLGPEAKSLLSGLLKKD-PKQ 250
Query: 492 R-----PSFKQILSHLDIAS---QEVLRIQPEPYYKMQMIWKEEIRVHMLEMQA 537
R K+I+ H A Q V + P +K Q+ + + R E A
Sbjct: 251 RLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDEEFTA 304
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 186 KISDFGTCREW-NNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
KI+DFG C+E + +T F GT ++APEV+ + +D W
Sbjct: 149 KITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWW 193
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 125/286 (43%), Gaps = 24/286 (8%)
Query: 266 LQWLGSGAQGAVF------SGK------LRSEIVAVKKVREQKETDIRHLRKLNHPNIVK 313
L+ LG G G V +G+ L+ E++ K T+ R L+ HP +
Sbjct: 14 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTA 73
Query: 314 FKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHS-KQIIH 372
K C VMEY G L+ L R + +I + ++YLHS K +++
Sbjct: 74 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVY 133
Query: 373 RDLKSPNVLIGSKEEAKISDFGTCREW-NNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDI 431
RDLK N+++ KI+DFG C+E + +T F GT ++APEV+ + +D
Sbjct: 134 RDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDW 193
Query: 432 WSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSS 491
W G+V++E++ P+ + D + + + P + P+ LL + + P
Sbjct: 194 WGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP-RTLGPEAKSLLSGLLKKD-PKQ 251
Query: 492 R-----PSFKQILSHLDIAS---QEVLRIQPEPYYKMQMIWKEEIR 529
R K+I+ H A Q V + P +K Q+ + + R
Sbjct: 252 RLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTR 297
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 186 KISDFGTCREW-NNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
KI+DFG C+E + +T F GT ++APEV+ + +D W
Sbjct: 150 KITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWW 194
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 127/294 (43%), Gaps = 24/294 (8%)
Query: 266 LQWLGSGAQGAVF------SGK------LRSEIVAVKKVREQKETDIRHLRKLNHPNIVK 313
L+ LG G G V +G+ L+ E++ K T+ R L+ HP +
Sbjct: 15 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTA 74
Query: 314 FKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHS-KQIIH 372
K C VMEY G L+ L R + +I + ++YLHS K +++
Sbjct: 75 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVY 134
Query: 373 RDLKSPNVLIGSKEEAKISDFGTCREW-NNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDI 431
RDLK N+++ KI+DFG C+E + +T F GT ++APEV+ + +D
Sbjct: 135 RDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDW 194
Query: 432 WSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSS 491
W G+V++E++ P+ + D + + + P + P+ LL + + P
Sbjct: 195 WGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP-RTLGPEAKSLLSGLLKKD-PKQ 252
Query: 492 R-----PSFKQILSHLDIAS---QEVLRIQPEPYYKMQMIWKEEIRVHMLEMQA 537
R K+I+ H A Q V + P +K Q+ + + R E A
Sbjct: 253 RLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDEEFTA 306
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 186 KISDFGTCREW-NNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
KI+DFG C+E + +T F GT ++APEV+ + +D W
Sbjct: 151 KITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWW 195
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 127/265 (47%), Gaps = 13/265 (4%)
Query: 299 DIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQI 358
++R + LNHPNIVK V +V EY + G +++ L + RQI
Sbjct: 63 EVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQI 122
Query: 359 AAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPE 418
+ + Y H K I+HRDLK+ N+L+ + KI+DFG E+ + +F G + APE
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPE 182
Query: 419 VIRNEQCSD-KIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGF 477
+ + ++ ++D+WS G++L+ L++ P+ + + V +P + D
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYXST-DCE 241
Query: 478 QLLMKMCWSNAPSSRPSFKQILSH--LDIASQEVLRIQPEPYYKMQMIWKEEIRVHMLEM 535
LL K N PS R + +QI ++ ++ + +PY + +K+ R E+
Sbjct: 242 NLLKKFLILN-PSKRGTLEQIXKDRWXNVGHED---DELKPYVEPLPDYKDPRRT---EL 294
Query: 536 QANKSHVPKFEEFEDDLIKKRENEL 560
+ + EE +D L+ +R NE+
Sbjct: 295 XVSXGYTR--EEIQDSLVGQRYNEV 317
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 50/102 (49%), Gaps = 11/102 (10%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSD-KIDIWYKNRLC 235
+L+ + KI+DFG E+ + +F G + APE+ + ++ ++D+W +
Sbjct: 144 LLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
Query: 236 FPTSLMA--------RIGEFKSFVLRDEWEIPFESISDLQWL 269
+ +L++ + E + VLR ++ IPF +D + L
Sbjct: 204 Y--TLVSGSLPFDGQNLKELRERVLRGKYRIPFYXSTDCENL 243
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 100/193 (51%), Gaps = 11/193 (5%)
Query: 269 LGSGAQGA--VFSGKLRSEIVAVK------KVREQKETDIRHLRKLNHPNIVKFKGVCTQ 320
+GSG G + K +E+VAVK K+ E + +I + R L HPNIV+FK V
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 321 APCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNV 380
IVMEY + G L+ + + + +Q+ +G++Y H+ Q+ HRDLK N
Sbjct: 87 PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENT 146
Query: 381 LI-GS-KEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKI-DIWSYGIV 437
L+ GS KI FG + S GT A++APEV+ ++ K+ D+WS G+
Sbjct: 147 LLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVT 206
Query: 438 LWELLTCETPYKD 450
L+ +L P++D
Sbjct: 207 LYVMLVGAYPFED 219
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 138/289 (47%), Gaps = 30/289 (10%)
Query: 251 VLRDEWEIPFESISDLQWLGSGAQGAVFSGK-LRSEIVAVKKV-------REQKETDIRH 302
LRD I FE + + +G+G G V+ G+ +++ +A KV E+ + +I
Sbjct: 18 ALRDPAGI-FELV---ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINM 73
Query: 303 LRKL-NHPNIVKFKG--VCTQAPCYC----IVMEYCAYGPLYNLLKD--GEEVPPQRLYN 353
L+K +H NI + G + P +VME+C G + +L+K+ G + + +
Sbjct: 74 LKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY 133
Query: 354 WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNK-STKMSFAGTV 412
R+I G+++LH ++IHRD+K NVL+ E K+ DFG + + + +F GT
Sbjct: 134 ICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTP 193
Query: 413 AWMAPEVIRNEQCSD-----KIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHL 467
WMAPEVI ++ D K D+WS GI E+ P D+ ++ + +
Sbjct: 194 YWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPR 253
Query: 468 PIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSH---LDIASQEVLRIQ 513
FQ ++ C S RP+ +Q++ H D ++ +RIQ
Sbjct: 254 LKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQPNERQVRIQ 302
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 174 GLGVLIGSKEEAKISDFGTCREWNNK-STKMSFAGTVAWMAPEVIRNEQCSD-----KID 227
G VL+ E K+ DFG + + + +F GT WMAPEVI ++ D K D
Sbjct: 157 GQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSD 216
Query: 228 IW 229
+W
Sbjct: 217 LW 218
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 106/203 (52%), Gaps = 14/203 (6%)
Query: 266 LQWLGSGAQGAVFSGKLR--SEIVAVKKVREQ---KETDI------RHL--RKLNHPNIV 312
L+ +G G+ V +L+ I A+K V+++ + DI +H+ + NHP +V
Sbjct: 10 LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLV 69
Query: 313 KFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIH 372
V+EY G L ++ ++P + ++ +I+ +NYLH + II+
Sbjct: 70 GLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIY 129
Query: 373 RDLKSPNVLIGSKEEAKISDFGTCRE-WNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDI 431
RDLK NVL+ S+ K++D+G C+E T F GT ++APE++R E +D
Sbjct: 130 RDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDW 189
Query: 432 WSYGIVLWELLTCETPYKDVDSS 454
W+ G++++E++ +P+ V SS
Sbjct: 190 WALGVLMFEMMAGRSPFDIVGSS 212
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 177 VLIGSKEEAKISDFGTCRE-WNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNRLC 235
VL+ S+ K++D+G C+E T F GT ++APE++R E +D W L
Sbjct: 137 VLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLM 196
Query: 236 F 236
F
Sbjct: 197 F 197
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 106/203 (52%), Gaps = 14/203 (6%)
Query: 266 LQWLGSGAQGAVFSGKLR--SEIVAVKKVREQ---KETDI------RHL--RKLNHPNIV 312
L+ +G G+ V +L+ I A+K V+++ + DI +H+ + NHP +V
Sbjct: 25 LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLV 84
Query: 313 KFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIH 372
V+EY G L ++ ++P + ++ +I+ +NYLH + II+
Sbjct: 85 GLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIY 144
Query: 373 RDLKSPNVLIGSKEEAKISDFGTCRE-WNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDI 431
RDLK NVL+ S+ K++D+G C+E T F GT ++APE++R E +D
Sbjct: 145 RDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDW 204
Query: 432 WSYGIVLWELLTCETPYKDVDSS 454
W+ G++++E++ +P+ V SS
Sbjct: 205 WALGVLMFEMMAGRSPFDIVGSS 227
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 177 VLIGSKEEAKISDFGTCRE-WNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNRLC 235
VL+ S+ K++D+G C+E T F GT ++APE++R E +D W L
Sbjct: 152 VLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLM 211
Query: 236 F 236
F
Sbjct: 212 F 212
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 107/203 (52%), Gaps = 14/203 (6%)
Query: 266 LQWLGSGAQGAVFSGKLR--SEIVAVKKVREQ---KETDI------RHL--RKLNHPNIV 312
L+ +G G+ V +L+ I A++ V+++ + DI +H+ + NHP +V
Sbjct: 57 LRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLV 116
Query: 313 KFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIH 372
V+EY G L ++ ++P + ++ +I+ +NYLH + II+
Sbjct: 117 GLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIY 176
Query: 373 RDLKSPNVLIGSKEEAKISDFGTCRE-WNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDI 431
RDLK NVL+ S+ K++D+G C+E T +F GT ++APE++R E +D
Sbjct: 177 RDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDW 236
Query: 432 WSYGIVLWELLTCETPYKDVDSS 454
W+ G++++E++ +P+ V SS
Sbjct: 237 WALGVLMFEMMAGRSPFDIVGSS 259
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 177 VLIGSKEEAKISDFGTCRE-WNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNRLC 235
VL+ S+ K++D+G C+E T +F GT ++APE++R E +D W L
Sbjct: 184 VLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLM 243
Query: 236 F 236
F
Sbjct: 244 F 244
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 106/203 (52%), Gaps = 14/203 (6%)
Query: 266 LQWLGSGAQGAVFSGKLR--SEIVAVKKVREQ---KETDI------RHL--RKLNHPNIV 312
L+ +G G+ V +L+ I A+K V+++ + DI +H+ + NHP +V
Sbjct: 14 LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLV 73
Query: 313 KFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIH 372
V+EY G L ++ ++P + ++ +I+ +NYLH + II+
Sbjct: 74 GLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIY 133
Query: 373 RDLKSPNVLIGSKEEAKISDFGTCRE-WNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDI 431
RDLK NVL+ S+ K++D+G C+E T F GT ++APE++R E +D
Sbjct: 134 RDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDW 193
Query: 432 WSYGIVLWELLTCETPYKDVDSS 454
W+ G++++E++ +P+ V SS
Sbjct: 194 WALGVLMFEMMAGRSPFDIVGSS 216
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 177 VLIGSKEEAKISDFGTCRE-WNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNRLC 235
VL+ S+ K++D+G C+E T F GT ++APE++R E +D W L
Sbjct: 141 VLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLM 200
Query: 236 F 236
F
Sbjct: 201 F 201
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 112/218 (51%), Gaps = 16/218 (7%)
Query: 266 LQWLGSGAQGAVFSG--KLRSEIVAVKKVREQ---KETDI-------RHLRKLNHPNIVK 313
L LG G+ G V K E+ A+K +++ ++ D+ R L L+ P +
Sbjct: 24 LMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLT 83
Query: 314 FKGVCTQ-APCYCIVMEYCAYGPL-YNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQII 371
C Q VMEY G L Y++ + G+ PQ ++ +A +I+ G+ +LH + II
Sbjct: 84 QLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVF-YAAEISIGLFFLHKRGII 142
Query: 372 HRDLKSPNVLIGSKEEAKISDFGTCRE-WNNKSTKMSFAGTVAWMAPEVIRNEQCSDKID 430
+RDLK NV++ S+ KI+DFG C+E + T F GT ++APE+I + +D
Sbjct: 143 YRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVD 202
Query: 431 IWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLP 468
W+YG++L+E+L + P+ D + + ++ P
Sbjct: 203 WWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYP 240
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 177 VLIGSKEEAKISDFGTCRE-WNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNRLC 235
V++ S+ KI+DFG C+E + T F GT ++APE+I + +D W L
Sbjct: 151 VMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLL 210
Query: 236 F 236
+
Sbjct: 211 Y 211
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 115/231 (49%), Gaps = 25/231 (10%)
Query: 242 ARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKLR-SEIVAVKK--------- 291
A++GE K D+ FE IS+L G+G G V + R S ++ +K
Sbjct: 8 AKVGELKD----DD----FERISEL---GAGNGGVVTKVQHRPSGLIMARKLIHLEIKPA 56
Query: 292 VREQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRL 351
+R Q +++ L + N P IV F G I ME+ G L +LK+ + +P + L
Sbjct: 57 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEIL 116
Query: 352 YNWARQIAAGMNYLHSK-QIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAG 410
+ + G+ YL K QI+HRD+K N+L+ S+ E K+ DFG + + S SF G
Sbjct: 117 GKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-SMANSFVG 175
Query: 411 TVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVDSSAI--IWG 459
T ++MAPE ++ S + DIWS G+ L EL P D+ + I+G
Sbjct: 176 TRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIFG 226
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ S+ E K+ DFG + + S SF GT ++MAPE ++ S + DIW
Sbjct: 146 ILVNSRGEIKLCDFGVSGQLID-SMANSFVGTRSYMAPERLQGTHYSVQSDIW 197
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 112/229 (48%), Gaps = 12/229 (5%)
Query: 284 SEIVAVKKV----REQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNL 339
++I+ KK+ ++ E + R R L HPNIV+ ++ + +V + G L+
Sbjct: 34 AKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFED 93
Query: 340 LKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEA---KISDFGTC 396
+ E + +QI +N+ H I+HRDLK N+L+ SK + K++DFG
Sbjct: 94 IVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA 153
Query: 397 RE-WNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVDSSA 455
E ++ FAGT +++PEV+R + +D+W+ G++L+ LL P+ D D
Sbjct: 154 IEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHR 213
Query: 456 IIWGVGSSSLHLPIP---STCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
+ + + + P P + P+ L+ KM N P+ R + + L H
Sbjct: 214 LYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTIN-PAKRITASEALKH 261
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 177 VLIGSKEEA---KISDFGTCRE-WNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ SK + K++DFG E ++ FAGT +++PEV+R + +D+W
Sbjct: 134 LLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMW 190
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 112/229 (48%), Gaps = 12/229 (5%)
Query: 284 SEIVAVKKV----REQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNL 339
++I+ KK+ ++ E + R R L HPNIV+ ++ + +V + G L+
Sbjct: 34 AKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFED 93
Query: 340 LKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEA---KISDFGTC 396
+ E + +QI +N+ H I+HRDLK N+L+ SK + K++DFG
Sbjct: 94 IVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA 153
Query: 397 RE-WNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVDSSA 455
E ++ FAGT +++PEV+R + +D+W+ G++L+ LL P+ D D
Sbjct: 154 IEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHR 213
Query: 456 IIWGVGSSSLHLPIP---STCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
+ + + + P P + P+ L+ KM N P+ R + + L H
Sbjct: 214 LYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTIN-PAKRITASEALKH 261
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 177 VLIGSKEEA---KISDFGTCRE-WNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ SK + K++DFG E ++ FAGT +++PEV+R + +D+W
Sbjct: 134 LLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMW 190
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 118/254 (46%), Gaps = 17/254 (6%)
Query: 260 FESISDLQWLGSGAQGAVFSGKLR-SEIVAVKK---------VREQKETDIRHLRKLNHP 309
FE IS+L G+G G VF + S +V +K +R Q +++ L + N P
Sbjct: 11 FEKISEL---GAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 67
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK- 368
IV F G I ME+ G L +LK +P Q L + + G+ YL K
Sbjct: 68 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 127
Query: 369 QIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDK 428
+I+HRD+K N+L+ S+ E K+ DFG + ++ F GT ++M+PE ++ S +
Sbjct: 128 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMAN-EFVGTRSYMSPERLQGTHYSVQ 186
Query: 429 IDIWSYGIVLWELLTCETPYKDVDSSAII-WGVGSSSLHLPIPSTCPDGFQLLMKMCWSN 487
DIWS G+ L E+ P + ++ + V LP + FQ + C
Sbjct: 187 SDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEPPPKLP-SAVFSLEFQDFVNKCLIK 245
Query: 488 APSSRPSFKQILSH 501
P+ R KQ++ H
Sbjct: 246 NPAERADLKQLMVH 259
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ S+ E K+ DFG + ++ F GT ++M+PE ++ S + DIW
Sbjct: 139 ILVNSRGEIKLCDFGVSGQLIDEMAN-EFVGTRSYMSPERLQGTHYSVQSDIW 190
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 103/216 (47%), Gaps = 24/216 (11%)
Query: 269 LGSGAQGAVFSG---KLRSEIVAVKKVREQKETD------------IRHLRKLNHPNIVK 313
+G GA G VF K VA+K+VR Q + +RHL HPN+V+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 314 FKGVCTQAPC-----YCIVMEYCAYGPLYNLLKDGEE-VPPQRLYNWARQIAAGMNYLHS 367
VCT + +V E+ L K E VP + + + Q+ G+++LHS
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 368 KQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSD 427
+++HRDLK N+L+ S + K++DFG R ++ + S T+ + APEV+ +
Sbjct: 139 HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYAT 198
Query: 428 KIDIWSYGIVLWELLTCETPYK---DVDSSAIIWGV 460
+D+WS G + E+ + ++ DVD I V
Sbjct: 199 PVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDV 234
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 29/53 (54%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ S + K++DFG R ++ + S T+ + APEV+ + +D+W
Sbjct: 151 ILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLW 203
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 86/146 (58%), Gaps = 5/146 (3%)
Query: 326 IVMEYCAYGPL-YNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGS 384
VMEY G L Y++ + G P ++ +A +IA G+ +L SK II+RDLK NV++ S
Sbjct: 98 FVMEYVNGGDLMYHIQQVGRFKEPHAVF-YAAEIAIGLFFLQSKGIIYRDLKLDNVMLDS 156
Query: 385 KEEAKISDFGTCRE--WNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELL 442
+ KI+DFG C+E W+ +TK F GT ++APE+I + +D W++G++L+E+L
Sbjct: 157 EGHIKIADFGMCKENIWDGVTTK-XFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML 215
Query: 443 TCETPYKDVDSSAIIWGVGSSSLHLP 468
+ P++ D + + ++ P
Sbjct: 216 AGQAPFEGEDEDELFQSIMEHNVAYP 241
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 177 VLIGSKEEAKISDFGTCRE--WNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
V++ S+ KI+DFG C+E W+ +TK F GT ++APE+I + +D W
Sbjct: 152 VMLDSEGHIKIADFGMCKENIWDGVTTK-XFCGTPDYIAPEIIAYQPYGKSVDWW 205
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 103/216 (47%), Gaps = 24/216 (11%)
Query: 269 LGSGAQGAVFSG---KLRSEIVAVKKVREQKETD------------IRHLRKLNHPNIVK 313
+G GA G VF K VA+K+VR Q + +RHL HPN+V+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 314 FKGVCTQAPC-----YCIVMEYCAYGPLYNLLKDGEE-VPPQRLYNWARQIAAGMNYLHS 367
VCT + +V E+ L K E VP + + + Q+ G+++LHS
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 368 KQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSD 427
+++HRDLK N+L+ S + K++DFG R ++ + S T+ + APEV+ +
Sbjct: 139 HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYAT 198
Query: 428 KIDIWSYGIVLWELLTCETPYK---DVDSSAIIWGV 460
+D+WS G + E+ + ++ DVD I V
Sbjct: 199 PVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDV 234
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 29/53 (54%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ S + K++DFG R ++ + S T+ + APEV+ + +D+W
Sbjct: 151 ILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLW 203
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 103/216 (47%), Gaps = 24/216 (11%)
Query: 269 LGSGAQGAVFSG---KLRSEIVAVKKVREQKETD------------IRHLRKLNHPNIVK 313
+G GA G VF K VA+K+VR Q + +RHL HPN+V+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 314 FKGVCTQAPC-----YCIVMEYCAYGPLYNLLKDGEE-VPPQRLYNWARQIAAGMNYLHS 367
VCT + +V E+ L K E VP + + + Q+ G+++LHS
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 368 KQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSD 427
+++HRDLK N+L+ S + K++DFG R ++ + S T+ + APEV+ +
Sbjct: 139 HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYAT 198
Query: 428 KIDIWSYGIVLWELLTCETPYK---DVDSSAIIWGV 460
+D+WS G + E+ + ++ DVD I V
Sbjct: 199 PVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDV 234
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 29/53 (54%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ S + K++DFG R ++ + S T+ + APEV+ + +D+W
Sbjct: 151 ILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLW 203
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 127/286 (44%), Gaps = 48/286 (16%)
Query: 253 RDEWEIPFESISDLQWLGSGAQGAVFSGKL--RSEIVAVKKVREQK--------ETDIRH 302
RD++E+ + +GSGA V + + E VA+K++ +K +I+
Sbjct: 14 RDDYELQ-------EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQA 66
Query: 303 LRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK----DGEE----VPPQRLYNW 354
+ + +HPNIV + +VM+ + G + +++K GE + +
Sbjct: 67 MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI 126
Query: 355 ARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFG------TCREWNNKSTKMSF 408
R++ G+ YLH IHRD+K+ N+L+G +I+DFG T + + +F
Sbjct: 127 LREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 186
Query: 409 AGTVAWMAPEVIRNEQCSD-KIDIWSYGIVLWELLTCETPYKDV------------DSSA 455
GT WMAPEV+ + D K DIWS+GI EL T PY D +
Sbjct: 187 VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPS 246
Query: 456 IIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
+ GV + + F+ ++ +C P RP+ ++L H
Sbjct: 247 LETGVQDKEMLKKYGKS----FRKMISLCLQKDPEKRPTAAELLRH 288
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
Query: 177 VLIGSKEEAKISDFG------TCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSD-KIDIW 229
+L+G +I+DFG T + + +F GT WMAPEV+ + D K DIW
Sbjct: 152 ILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIW 211
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 86/160 (53%), Gaps = 4/160 (2%)
Query: 293 REQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLY 352
RE+ E ++ LR++ HPNI+ V +++E + G L++ L E + +
Sbjct: 59 REEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 353 NWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKE----EAKISDFGTCREWNNKSTKMSF 408
++ +QI G+NYLH+K+I H DLK N+++ K K+ DFG E + +
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178
Query: 409 AGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
GT ++APE++ E + D+WS G++ + LL+ +P+
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 120/248 (48%), Gaps = 21/248 (8%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVK---KVREQKETDIRHLRK-------LNHPNIVKFKG 316
LG G G V+ + + IVA+K K + +KE LR+ L+HPNI++
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLK 376
+++EY G LY L+ QR ++A + Y H K++IHRD+K
Sbjct: 91 YFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKKVIHRDIK 150
Query: 377 SPNVLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTVAWMAPEVIRNEQCSDKIDIWS 433
N+L+G K E KI+DFG W+ + + + GT+ ++ PE+I ++K+D+W
Sbjct: 151 PENLLLGLKGELKIADFG----WSVHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWC 206
Query: 434 YGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRP 493
G++ +ELL P++ + + + L P++ P G Q L+ + PS R
Sbjct: 207 IGVLCYELLVGNPPFESASHNETYRRI--VKVDLKFPASVPTGAQDLISKLLRHNPSERL 264
Query: 494 SFKQILSH 501
Q+ +H
Sbjct: 265 PLAQVSAH 272
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 7/53 (13%)
Query: 187 ISDFGTCREWNNKSTKM---SFAGTVAWMAPEVIRNEQCSDKIDIWYKNRLCF 236
I+DFG W+ + + + GT+ ++ PE+I ++K+D+W LC+
Sbjct: 164 IADFG----WSVHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCY 212
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 86/146 (58%), Gaps = 5/146 (3%)
Query: 326 IVMEYCAYGPL-YNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGS 384
VMEY G L Y++ + G P ++ +A +IA G+ +L SK II+RDLK NV++ S
Sbjct: 419 FVMEYVNGGDLMYHIQQVGRFKEPHAVF-YAAEIAIGLFFLQSKGIIYRDLKLDNVMLDS 477
Query: 385 KEEAKISDFGTCRE--WNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELL 442
+ KI+DFG C+E W+ +TK F GT ++APE+I + +D W++G++L+E+L
Sbjct: 478 EGHIKIADFGMCKENIWDGVTTK-XFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML 536
Query: 443 TCETPYKDVDSSAIIWGVGSSSLHLP 468
+ P++ D + + ++ P
Sbjct: 537 AGQAPFEGEDEDELFQSIMEHNVAYP 562
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 177 VLIGSKEEAKISDFGTCRE--WNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
V++ S+ KI+DFG C+E W+ +TK F GT ++APE+I + +D W
Sbjct: 473 VMLDSEGHIKIADFGMCKENIWDGVTTK-XFCGTPDYIAPEIIAYQPYGKSVDWW 526
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 115/248 (46%), Gaps = 21/248 (8%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVK---KVREQKETDIRHLRK-------LNHPNIVKFKG 316
LG G G V+ + + I+A+K K + +KE LR+ L HPNI++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLK 376
+++E+ G LY L+ QR + ++A ++Y H +++IHRD+K
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIK 141
Query: 377 SPNVLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTVAWMAPEVIRNEQCSDKIDIWS 433
N+L+G K E KI+DFG W+ + + GT+ ++ PE+I + +K+D+W
Sbjct: 142 PENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWC 197
Query: 434 YGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRP 493
G++ +E L P+ + + ++ L P DG + L+ P R
Sbjct: 198 AGVLCYEFLVGMPPFDSPSHTETHRRI--VNVDLKFPPFLSDGSKDLISKLLRYHPPQRL 255
Query: 494 SFKQILSH 501
K ++ H
Sbjct: 256 PLKGVMEH 263
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+G K E KI+DFG W+ + + GT+ ++ PE+I + +K+D+W
Sbjct: 145 LLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGV 200
Query: 234 LCF 236
LC+
Sbjct: 201 LCY 203
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 120/253 (47%), Gaps = 24/253 (9%)
Query: 269 LGSGAQGAVF--SGKLRSEIVAVK-------KVREQKETDIRH---LRKLNHPNIVKFKG 316
LG G+ G V K+ + AVK K + KE+ +R L++L+HPNI+K
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 93
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLL---KDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHR 373
+ +V E G L++ + K EV R+ RQ+ +G+ Y+H +I+HR
Sbjct: 94 FFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI---IRQVLSGITYMHKNKIVHR 150
Query: 374 DLKSPNVLIGSKEE---AKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKID 430
DLK N+L+ SK + +I DFG + GT ++APEV+ +K D
Sbjct: 151 DLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCD 209
Query: 431 IWSYGIVLWELLTCETPYKDVDSSAIIWGV--GSSSLHLPIPSTCPDGFQLLMKMCWSNA 488
+WS G++L+ LL+ P+ + I+ V G + LP + + L++ +
Sbjct: 210 VWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYV 269
Query: 489 PSSRPSFKQILSH 501
PS R S + L H
Sbjct: 270 PSMRISARDALDH 282
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 115/248 (46%), Gaps = 21/248 (8%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVK---KVREQKETDIRHLRK-------LNHPNIVKFKG 316
LG G G V+ + + I+A+K K + +KE LR+ L HPNI++
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLK 376
+++E+ G LY L+ QR + ++A ++Y H +++IHRD+K
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIK 142
Query: 377 SPNVLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTVAWMAPEVIRNEQCSDKIDIWS 433
N+L+G K E KI+DFG W+ + + GT+ ++ PE+I + +K+D+W
Sbjct: 143 PENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWC 198
Query: 434 YGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRP 493
G++ +E L P+ + + ++ L P DG + L+ P R
Sbjct: 199 AGVLCYEFLVGMPPFDSPSHTETHRRI--VNVDLKFPPFLSDGSKDLISKLLRYHPPQRL 256
Query: 494 SFKQILSH 501
K ++ H
Sbjct: 257 PLKGVMEH 264
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+G K E KI+DFG W+ + + GT+ ++ PE+I + +K+D+W
Sbjct: 146 LLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGV 201
Query: 234 LCF 236
LC+
Sbjct: 202 LCY 204
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 115/248 (46%), Gaps = 21/248 (8%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVK---KVREQKETDIRHLRK-------LNHPNIVKFKG 316
LG G G V+ + + I+A+K K + +KE LR+ L HPNI++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLK 376
+++E+ G LY L+ QR + ++A ++Y H +++IHRD+K
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIK 141
Query: 377 SPNVLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTVAWMAPEVIRNEQCSDKIDIWS 433
N+L+G K E KI+DFG W+ + + GT+ ++ PE+I + +K+D+W
Sbjct: 142 PENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWC 197
Query: 434 YGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRP 493
G++ +E L P+ + + ++ L P DG + L+ P R
Sbjct: 198 AGVLCYEFLVGMPPFDSPSHTETHRRI--VNVDLKFPPFLSDGSKDLISKLLRYHPPQRL 255
Query: 494 SFKQILSH 501
K ++ H
Sbjct: 256 PLKGVMEH 263
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+G K E KI+DFG W+ + + GT+ ++ PE+I + +K+D+W
Sbjct: 145 LLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGV 200
Query: 234 LCF 236
LC+
Sbjct: 201 LCY 203
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 110/210 (52%), Gaps = 9/210 (4%)
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE----VPPQRL 351
KE D+ L++LNHPN++K+ + IV+E G L ++K ++ +P + +
Sbjct: 81 KEIDL--LKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTV 138
Query: 352 YNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKM-SFAG 410
+ + Q+ + + ++HS++++HRD+K NV I + K+ D G R +++K+T S G
Sbjct: 139 WKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVG 198
Query: 411 TVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETP-YKDVDSSAIIWGVGSSSLHLPI 469
T +M+PE I + K DIWS G +L+E+ ++P Y D + + + P+
Sbjct: 199 TPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPL 258
Query: 470 PST-CPDGFQLLMKMCWSNAPSSRPSFKQI 498
PS + + L+ MC + P RP +
Sbjct: 259 PSDHYSEELRQLVNMCINPDPEKRPDVTYV 288
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKM-SFAGTVAWMAPEVIRNEQCSDKIDIW 229
V I + K+ D G R +++K+T S GT +M+PE I + K DIW
Sbjct: 167 VFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIW 220
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 127/286 (44%), Gaps = 48/286 (16%)
Query: 253 RDEWEIPFESISDLQWLGSGAQGAVFSGKL--RSEIVAVKKVREQK--------ETDIRH 302
RD++E+ + +GSGA V + + E VA+K++ +K +I+
Sbjct: 9 RDDYELQ-------EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQA 61
Query: 303 LRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK----DGEE----VPPQRLYNW 354
+ + +HPNIV + +VM+ + G + +++K GE + +
Sbjct: 62 MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI 121
Query: 355 ARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFG------TCREWNNKSTKMSF 408
R++ G+ YLH IHRD+K+ N+L+G +I+DFG T + + +F
Sbjct: 122 LREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 181
Query: 409 AGTVAWMAPEVIRNEQCSD-KIDIWSYGIVLWELLTCETPYKDV------------DSSA 455
GT WMAPEV+ + D K DIWS+GI EL T PY D +
Sbjct: 182 VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPS 241
Query: 456 IIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
+ GV + + F+ ++ +C P RP+ ++L H
Sbjct: 242 LETGVQDKEMLKKYGKS----FRKMISLCLQKDPEKRPTAAELLRH 283
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
Query: 177 VLIGSKEEAKISDFG------TCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSD-KIDIW 229
+L+G +I+DFG T + + +F GT WMAPEV+ + D K DIW
Sbjct: 147 ILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIW 206
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 120/253 (47%), Gaps = 24/253 (9%)
Query: 269 LGSGAQGAVF--SGKLRSEIVAVK-------KVREQKETDIRH---LRKLNHPNIVKFKG 316
LG G+ G V K+ + AVK K + KE+ +R L++L+HPNI+K
Sbjct: 57 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 116
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLL---KDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHR 373
+ +V E G L++ + K EV R+ RQ+ +G+ Y+H +I+HR
Sbjct: 117 FFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI---IRQVLSGITYMHKNKIVHR 173
Query: 374 DLKSPNVLIGSKEE---AKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKID 430
DLK N+L+ SK + +I DFG + GT ++APEV+ +K D
Sbjct: 174 DLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCD 232
Query: 431 IWSYGIVLWELLTCETPYKDVDSSAIIWGV--GSSSLHLPIPSTCPDGFQLLMKMCWSNA 488
+WS G++L+ LL+ P+ + I+ V G + LP + + L++ +
Sbjct: 233 VWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYV 292
Query: 489 PSSRPSFKQILSH 501
PS R S + L H
Sbjct: 293 PSMRISARDALDH 305
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 14/208 (6%)
Query: 267 QWLGSGAQGAVFSGKLR--SEIVAVKKVR-------EQKETDIRHLRKLN----HPNIVK 313
+ LG G+ G VF + + ++ A+K ++ + E + R L+ HP +
Sbjct: 24 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 83
Query: 314 FKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHR 373
VMEY G L ++ + R +A +I G+ +LHSK I++R
Sbjct: 84 MFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYR 143
Query: 374 DLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMS-FAGTVAWMAPEVIRNEQCSDKIDIW 432
DLK N+L+ KI+DFG C+E K + F GT ++APE++ ++ + +D W
Sbjct: 144 DLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWW 203
Query: 433 SYGIVLWELLTCETPYKDVDSSAIIWGV 460
S+G++L+E+L ++P+ D + +
Sbjct: 204 SFGVLLYEMLIGQSPFHGQDEEELFHSI 231
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 176 GVLIGSKEEAKISDFGTCREWNNKSTKMS-FAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ KI+DFG C+E K + F GT ++APE++ ++ + +D W
Sbjct: 149 NILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWW 203
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 260 FESISDLQWLGSGAQGAVFSGKLR-SEIVAVKK---------VREQKETDIRHLRKLNHP 309
FE IS+L G+G G VF + S +V +K +R Q +++ L + N P
Sbjct: 35 FEKISEL---GAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 91
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK- 368
IV F G I ME+ G L +LK +P Q L + + G+ YL K
Sbjct: 92 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 151
Query: 369 QIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDK 428
+I+HRD+K N+L+ S+ E K+ DFG + + S SF GT ++M+PE ++ S +
Sbjct: 152 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQGTHYSVQ 210
Query: 429 IDIWSYGIVLWELLTCETPYKDVDS 453
DIWS G+ L E+ P D+
Sbjct: 211 SDIWSMGLSLVEMAVGRYPIPPPDA 235
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ S+ E K+ DFG + + S SF GT ++M+PE ++ S + DIW
Sbjct: 163 ILVNSRGEIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQGTHYSVQSDIW 214
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 120/253 (47%), Gaps = 24/253 (9%)
Query: 269 LGSGAQGAVF--SGKLRSEIVAVK-------KVREQKETDIRH---LRKLNHPNIVKFKG 316
LG G+ G V K+ + AVK K + KE+ +R L++L+HPNI+K
Sbjct: 58 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 117
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLL---KDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHR 373
+ +V E G L++ + K EV R+ RQ+ +G+ Y+H +I+HR
Sbjct: 118 FFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI---IRQVLSGITYMHKNKIVHR 174
Query: 374 DLKSPNVLIGSKEE---AKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKID 430
DLK N+L+ SK + +I DFG + GT ++APEV+ +K D
Sbjct: 175 DLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCD 233
Query: 431 IWSYGIVLWELLTCETPYKDVDSSAIIWGV--GSSSLHLPIPSTCPDGFQLLMKMCWSNA 488
+WS G++L+ LL+ P+ + I+ V G + LP + + L++ +
Sbjct: 234 VWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYV 293
Query: 489 PSSRPSFKQILSH 501
PS R S + L H
Sbjct: 294 PSMRISARDALDH 306
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 14/208 (6%)
Query: 267 QWLGSGAQGAVFSGKLR--SEIVAVKKVR-------EQKETDIRHLRKLN----HPNIVK 313
+ LG G+ G VF + + ++ A+K ++ + E + R L+ HP +
Sbjct: 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 82
Query: 314 FKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHR 373
VMEY G L ++ + R +A +I G+ +LHSK I++R
Sbjct: 83 MFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYR 142
Query: 374 DLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMS-FAGTVAWMAPEVIRNEQCSDKIDIW 432
DLK N+L+ KI+DFG C+E K + F GT ++APE++ ++ + +D W
Sbjct: 143 DLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWW 202
Query: 433 SYGIVLWELLTCETPYKDVDSSAIIWGV 460
S+G++L+E+L ++P+ D + +
Sbjct: 203 SFGVLLYEMLIGQSPFHGQDEEELFHSI 230
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 176 GVLIGSKEEAKISDFGTCREWNNKSTKMS-FAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ KI+DFG C+E K + F GT ++APE++ ++ + +D W
Sbjct: 148 NILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWW 202
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 117/227 (51%), Gaps = 6/227 (2%)
Query: 277 VFSGKLRSEIVAVKKVREQK-ETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGP 335
VF+GK+ + + +K +++K T+I + L++P++V F G +V+E C
Sbjct: 69 VFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRS 128
Query: 336 LYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFG- 394
L L K + V + RQ G+ YLH+ ++IHRDLK N+ + + KI DFG
Sbjct: 129 LLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGL 188
Query: 395 -TCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVDS 453
T E++ + K + GT ++APEV+ + S ++DIWS G +L+ LL + P++
Sbjct: 189 ATKIEFDGERKK-TLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCL 247
Query: 454 SAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILS 500
+ + +P P L+ +M ++ P+ RPS ++L+
Sbjct: 248 KETYIRIKKNEYSVPR-HINPVASALIRRMLHAD-PTLRPSVAELLT 292
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 184 EAKISDFG--TCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNRLCFPTSLM 241
+ KI DFG T E++ + K + GT ++APEV+ + S ++DIW C +L+
Sbjct: 180 DVKIGDFGLATKIEFDGERKK-TLCGTPNYIAPEVLCKKGHSFEVDIWSLG--CILYTLL 236
Query: 242 ARIGEFKSFVLRDEW 256
F++ L++ +
Sbjct: 237 VGKPPFETSCLKETY 251
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 120/253 (47%), Gaps = 24/253 (9%)
Query: 269 LGSGAQGAVF--SGKLRSEIVAVK-------KVREQKETDIRH---LRKLNHPNIVKFKG 316
LG G+ G V K+ + AVK K + KE+ +R L++L+HPNI+K
Sbjct: 40 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 99
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLL---KDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHR 373
+ +V E G L++ + K EV R+ RQ+ +G+ Y+H +I+HR
Sbjct: 100 FFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI---IRQVLSGITYMHKNKIVHR 156
Query: 374 DLKSPNVLIGSKEE---AKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKID 430
DLK N+L+ SK + +I DFG + GT ++APEV+ +K D
Sbjct: 157 DLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCD 215
Query: 431 IWSYGIVLWELLTCETPYKDVDSSAIIWGV--GSSSLHLPIPSTCPDGFQLLMKMCWSNA 488
+WS G++L+ LL+ P+ + I+ V G + LP + + L++ +
Sbjct: 216 VWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYV 275
Query: 489 PSSRPSFKQILSH 501
PS R S + L H
Sbjct: 276 PSMRISARDALDH 288
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 85/160 (53%), Gaps = 4/160 (2%)
Query: 293 REQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLY 352
RE+ E ++ LR++ HPNI+ + +++E + G L++ L + E +
Sbjct: 59 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEAT 118
Query: 353 NWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKE----EAKISDFGTCREWNNKSTKMSF 408
+ +QI G++YLHSK+I H DLK N+++ K K+ DFG + + +
Sbjct: 119 QFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNI 178
Query: 409 AGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
GT ++APE++ E + D+WS G++ + LL+ +P+
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 260 FESISDLQWLGSGAQGAVFSGKLR-SEIVAVKK---------VREQKETDIRHLRKLNHP 309
FE IS+L G+G G VF + S +V +K +R Q +++ L + N P
Sbjct: 8 FEKISEL---GAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 64
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK- 368
IV F G I ME+ G L +LK +P Q L + + G+ YL K
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 369 QIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDK 428
+I+HRD+K N+L+ S+ E K+ DFG + + S SF GT ++M+PE ++ S +
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQGTHYSVQ 183
Query: 429 IDIWSYGIVLWELLTCETPYKDVDS 453
DIWS G+ L E+ P D+
Sbjct: 184 SDIWSMGLSLVEMAVGRYPIPPPDA 208
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ S+ E K+ DFG + + S SF GT ++M+PE ++ S + DIW
Sbjct: 136 ILVNSRGEIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQGTHYSVQSDIW 187
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 113/226 (50%), Gaps = 4/226 (1%)
Query: 277 VFSGKLRSEIVAVKKVREQK-ETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGP 335
VF+GK+ + + +K +++K T+I + L++P++V F G +V+E C
Sbjct: 53 VFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRS 112
Query: 336 LYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGT 395
L L K + V + RQ G+ YLH+ ++IHRDLK N+ + + KI DFG
Sbjct: 113 LLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGL 172
Query: 396 CREWN-NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVDSS 454
+ + K GT ++APEV+ + S ++DIWS G +L+ LL + P++
Sbjct: 173 ATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLK 232
Query: 455 AIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILS 500
+ + +P P L+ +M ++ P+ RPS ++L+
Sbjct: 233 ETYIRIKKNEYSVP-RHINPVASALIRRMLHAD-PTLRPSVAELLT 276
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 177 VLIGSKEEAKISDFGTCREWN-NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNRLC 235
+ + + KI DFG + + K GT ++APEV+ + S ++DIW C
Sbjct: 157 LFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLG--C 214
Query: 236 FPTSLMARIGEFKSFVLRDEW 256
+L+ F++ L++ +
Sbjct: 215 ILYTLLVGKPPFETSCLKETY 235
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 260 FESISDLQWLGSGAQGAVFSGKLR-SEIVAVKK---------VREQKETDIRHLRKLNHP 309
FE IS+L G+G G VF + S +V +K +R Q +++ L + N P
Sbjct: 8 FEKISEL---GAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 64
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK- 368
IV F G I ME+ G L +LK +P Q L + + G+ YL K
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 369 QIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDK 428
+I+HRD+K N+L+ S+ E K+ DFG + + S SF GT ++M+PE ++ S +
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQGTHYSVQ 183
Query: 429 IDIWSYGIVLWELLTCETPYKDVDS 453
DIWS G+ L E+ P D+
Sbjct: 184 SDIWSMGLSLVEMAVGRYPIPPPDA 208
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ S+ E K+ DFG + + S SF GT ++M+PE ++ S + DIW
Sbjct: 136 ILVNSRGEIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQGTHYSVQSDIW 187
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 260 FESISDLQWLGSGAQGAVFSGKLR-SEIVAVKK---------VREQKETDIRHLRKLNHP 309
FE IS+L G+G G VF + S +V +K +R Q +++ L + N P
Sbjct: 70 FEKISEL---GAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 126
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK- 368
IV F G I ME+ G L +LK +P Q L + + G+ YL K
Sbjct: 127 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 186
Query: 369 QIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDK 428
+I+HRD+K N+L+ S+ E K+ DFG + + S SF GT ++M+PE ++ S +
Sbjct: 187 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQGTHYSVQ 245
Query: 429 IDIWSYGIVLWELLTCETPYKDVDS 453
DIWS G+ L E+ P D+
Sbjct: 246 SDIWSMGLSLVEMAVGRYPIPPPDA 270
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ S+ E K+ DFG + + S SF GT ++M+PE ++ S + DIW
Sbjct: 198 ILVNSRGEIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQGTHYSVQSDIW 249
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 85/160 (53%), Gaps = 4/160 (2%)
Query: 293 REQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLY 352
RE+ E ++ LR++ HPNI+ + +++E + G L++ L + E +
Sbjct: 52 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEAT 111
Query: 353 NWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKE----EAKISDFGTCREWNNKSTKMSF 408
+ +QI G++YLHSK+I H DLK N+++ K K+ DFG + + +
Sbjct: 112 QFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNI 171
Query: 409 AGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
GT ++APE++ E + D+WS G++ + LL+ +P+
Sbjct: 172 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 211
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 85/160 (53%), Gaps = 4/160 (2%)
Query: 293 REQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLY 352
RE+ E ++ LR++ HPNI+ + +++E + G L++ L + E +
Sbjct: 73 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEAT 132
Query: 353 NWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKE----EAKISDFGTCREWNNKSTKMSF 408
+ +QI G++YLHSK+I H DLK N+++ K K+ DFG + + +
Sbjct: 133 QFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNI 192
Query: 409 AGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
GT ++APE++ E + D+WS G++ + LL+ +P+
Sbjct: 193 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 232
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 260 FESISDLQWLGSGAQGAVFSGKLR-SEIVAVKK---------VREQKETDIRHLRKLNHP 309
FE IS+L G+G G VF + S +V +K +R Q +++ L + N P
Sbjct: 8 FEKISEL---GAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 64
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK- 368
IV F G I ME+ G L +LK +P Q L + + G+ YL K
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 369 QIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDK 428
+I+HRD+K N+L+ S+ E K+ DFG + + S SF GT ++M+PE ++ S +
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQGTHYSVQ 183
Query: 429 IDIWSYGIVLWELLTCETPYKDVDS 453
DIWS G+ L E+ P D+
Sbjct: 184 SDIWSMGLSLVEMAVGRYPIPPPDA 208
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ S+ E K+ DFG + + S SF GT ++M+PE ++ S + DIW
Sbjct: 136 ILVNSRGEIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQGTHYSVQSDIW 187
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 118/253 (46%), Gaps = 24/253 (9%)
Query: 269 LGSGAQGAVF--SGKLRSEIVAVK-------KVREQKETDIRH---LRKLNHPNIVKFKG 316
LG G+ G V K+ + AVK K + KE+ +R L++L+HPNI K
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYE 93
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLL---KDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHR 373
+ +V E G L++ + K EV R+ RQ+ +G+ Y H +I+HR
Sbjct: 94 FFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI---IRQVLSGITYXHKNKIVHR 150
Query: 374 DLKSPNVLIGSKEE---AKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKID 430
DLK N+L+ SK + +I DFG + GT ++APEV+ +K D
Sbjct: 151 DLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHG-TYDEKCD 209
Query: 431 IWSYGIVLWELLTCETPYKDVDSSAIIWGV--GSSSLHLPIPSTCPDGFQLLMKMCWSNA 488
+WS G++L+ LL+ P+ + I+ V G + LP + + L++ +
Sbjct: 210 VWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKXLTYV 269
Query: 489 PSSRPSFKQILSH 501
PS R S + L H
Sbjct: 270 PSXRISARDALDH 282
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 260 FESISDLQWLGSGAQGAVFSGKLR-SEIVAVKK---------VREQKETDIRHLRKLNHP 309
FE IS+L G+G G VF + S +V +K +R Q +++ L + N P
Sbjct: 8 FEKISEL---GAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 64
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK- 368
IV F G I ME+ G L +LK +P Q L + + G+ YL K
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 369 QIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDK 428
+I+HRD+K N+L+ S+ E K+ DFG + + S SF GT ++M+PE ++ S +
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQGTHYSVQ 183
Query: 429 IDIWSYGIVLWELLTCETPYKDVDS 453
DIWS G+ L E+ P D+
Sbjct: 184 SDIWSMGLSLVEMAVGRYPIPPPDA 208
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ S+ E K+ DFG + + S SF GT ++M+PE ++ S + DIW
Sbjct: 136 ILVNSRGEIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQGTHYSVQSDIW 187
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 116/227 (51%), Gaps = 6/227 (2%)
Query: 277 VFSGKLRSEIVAVKKVREQK-ETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGP 335
VF+GK+ + + +K +++K T+I + L++P++V F G +V+E C
Sbjct: 69 VFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRS 128
Query: 336 LYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFG- 394
L L K + V + RQ G+ YLH+ ++IHRDLK N+ + + KI DFG
Sbjct: 129 LLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGL 188
Query: 395 -TCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVDS 453
T E++ + K GT ++APEV+ + S ++DIWS G +L+ LL + P++
Sbjct: 189 ATKIEFDGERKK-DLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCL 247
Query: 454 SAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILS 500
+ + +P P L+ +M ++ P+ RPS ++L+
Sbjct: 248 KETYIRIKKNEYSVPR-HINPVASALIRRMLHAD-PTLRPSVAELLT 292
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 177 VLIGSKEEAKISDFG--TCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNRL 234
+ + + KI DFG T E++ + K GT ++APEV+ + S ++DIW
Sbjct: 173 LFLNDDMDVKIGDFGLATKIEFDGERKK-DLCGTPNYIAPEVLCKKGHSFEVDIWSLG-- 229
Query: 235 CFPTSLMARIGEFKSFVLRDEW 256
C +L+ F++ L++ +
Sbjct: 230 CILYTLLVGKPPFETSCLKETY 251
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 116/227 (51%), Gaps = 6/227 (2%)
Query: 277 VFSGKLRSEIVAVKKVREQK-ETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGP 335
VF+GK+ + + +K +++K T+I + L++P++V F G +V+E C
Sbjct: 69 VFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRS 128
Query: 336 LYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFG- 394
L L K + V + RQ G+ YLH+ ++IHRDLK N+ + + KI DFG
Sbjct: 129 LLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGL 188
Query: 395 -TCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVDS 453
T E++ + K GT ++APEV+ + S ++DIWS G +L+ LL + P++
Sbjct: 189 ATKIEFDGERKK-XLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCL 247
Query: 454 SAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILS 500
+ + +P P L+ +M ++ P+ RPS ++L+
Sbjct: 248 KETYIRIKKNEYSVPR-HINPVASALIRRMLHAD-PTLRPSVAELLT 292
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 184 EAKISDFG--TCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNRLCFPTSLM 241
+ KI DFG T E++ + K GT ++APEV+ + S ++DIW C +L+
Sbjct: 180 DVKIGDFGLATKIEFDGERKK-XLCGTPNYIAPEVLCKKGHSFEVDIWSLG--CILYTLL 236
Query: 242 ARIGEFKSFVLRDEW 256
F++ L++ +
Sbjct: 237 VGKPPFETSCLKETY 251
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 112/226 (49%), Gaps = 17/226 (7%)
Query: 259 PFESISDLQWL---GSGAQGAVFSGKLRSEIV--AVKKVREQ---KETDIRH-------- 302
P SD +L G G+ G V + ++E V AVK ++++ K+ + +H
Sbjct: 33 PHAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVL 92
Query: 303 LRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGM 362
L+ + HP +V A V++Y G L+ L+ R +A +IA+ +
Sbjct: 93 LKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASAL 152
Query: 363 NYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCRE-WNNKSTKMSFAGTVAWMAPEVIR 421
YLHS I++RDLK N+L+ S+ ++DFG C+E + ST +F GT ++APEV+
Sbjct: 153 GYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLH 212
Query: 422 NEQCSDKIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHL 467
+ +D W G VL+E+L P+ +++ + + + L L
Sbjct: 213 KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQL 258
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 177 VLIGSKEEAKISDFGTCRE-WNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNRLC 235
+L+ S+ ++DFG C+E + ST +F GT ++APEV+ + +D W C
Sbjct: 170 ILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWW-----C 224
Query: 236 FPTSLMARIGEFKSFVLRDEWEI 258
L + F R+ E+
Sbjct: 225 LGAVLYEMLYGLPPFYSRNTAEM 247
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 117/243 (48%), Gaps = 13/243 (5%)
Query: 270 GSGAQGAVFSGKLRSEIVAVKKVREQK--------ETDIRHLRKLNHPNIVKFKGVCTQA 321
G A+ + L E+VA+K + + +T+I L+ L H +I + V A
Sbjct: 21 GGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETA 80
Query: 322 PCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVL 381
+V+EYC G L++ + + + + RQI + + Y+HS+ HRDLK N+L
Sbjct: 81 NKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLL 140
Query: 382 IGSKEEAKISDFGTC-REWNNKSTKM-SFAGTVAWMAPEVIRNEQ-CSDKIDIWSYGIVL 438
+ K+ DFG C + NK + + G++A+ APE+I+ + + D+WS GI+L
Sbjct: 141 FDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILL 200
Query: 439 WELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQI 498
+ L+ P+ D + A+ + +P P LL +M + P R S K +
Sbjct: 201 YVLMCGFLPFDDDNVMALYKKIMRGKYDVP-KWLSPSSILLLQQMLQVD-PKKRISMKNL 258
Query: 499 LSH 501
L+H
Sbjct: 259 LNH 261
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 94/183 (51%), Gaps = 5/183 (2%)
Query: 271 SGAQ-GAVFSGKLRSEIVAVKKVREQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVME 329
+G Q A F K R++ RE E ++ L+++ HPN++ V +++E
Sbjct: 35 TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILE 94
Query: 330 YCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGS----K 385
A G L++ L + E + + + +QI G+ YLHS QI H DLK N+++ K
Sbjct: 95 LVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK 154
Query: 386 EEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCE 445
KI DFG + + + + GT A++APE++ E + D+WS G++ + LL+
Sbjct: 155 PRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 214
Query: 446 TPY 448
+P+
Sbjct: 215 SPF 217
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 182 KEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
K KI DFG + + + + GT A++APE++ E + D+W
Sbjct: 154 KPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMW 201
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 123/261 (47%), Gaps = 20/261 (7%)
Query: 260 FESISDL-QWLGSGAQGAV------FSGK-LRSEIVAVKKV----REQKETDIRHLRKLN 307
F+S+ L + LG GA V +G+ ++I+ KK+ ++ E + R R L
Sbjct: 20 FQSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLK 79
Query: 308 HPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHS 367
HPNIV+ ++ + ++ + G L+ + E + +QI + + H
Sbjct: 80 HPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ 139
Query: 368 KQIIHRDLKSPNVLIGSK---EEAKISDFGTCREWNNKSTK-MSFAGTVAWMAPEVIRNE 423
++HRDLK N+L+ SK K++DFG E + FAGT +++PEV+R +
Sbjct: 140 MGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKD 199
Query: 424 QCSDKIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIP---STCPDGFQLL 480
+D+W+ G++L+ LL P+ D D + + + + P P + P+ L+
Sbjct: 200 PYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLI 259
Query: 481 MKMCWSNAPSSRPSFKQILSH 501
KM N PS R + + L H
Sbjct: 260 NKMLTIN-PSKRITAAEALKH 279
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 177 VLIGSK---EEAKISDFGTCREWNNKSTK-MSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ SK K++DFG E + FAGT +++PEV+R + +D+W
Sbjct: 152 LLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLW 208
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 86/174 (49%), Gaps = 16/174 (9%)
Query: 344 EEVPPQRLYN----------WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDF 393
EE P+ LY ++ Q+A GM +L S++ IHRDL + N+L+ K KI DF
Sbjct: 183 EEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDF 242
Query: 394 GTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYK 449
G R+ + + WMAPE I + + + D+WS+G++LWE+ + +PY
Sbjct: 243 GLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 302
Query: 450 DVDSSAIIWGVGSSSLHLPIPS-TCPDGFQLLMKMCWSNAPSSRPSFKQILSHL 502
V + P T P+ +Q ++ CW PS RP+F +++ HL
Sbjct: 303 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHL 355
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 9/76 (11%)
Query: 159 FLAG--CTTPDALAESIGLGVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMA 213
FLA C D A +I L+ K KI DFG R+ + + WMA
Sbjct: 213 FLASRKCIHRDLAARNI----LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 268
Query: 214 PEVIRNEQCSDKIDIW 229
PE I + + + D+W
Sbjct: 269 PETIFDRVYTIQSDVW 284
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 129/288 (44%), Gaps = 53/288 (18%)
Query: 261 ESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQKETD---------IRHLRKLNHP 309
E+ ++ +G G G V+ KL E+VA+KK+R ET+ I L++LNHP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE------VPPQRLYNWARQIAAGMN 363
NIVK V +V E+ L+ LKD + +P + ++ Q+ G+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF-----LHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIRN 422
+ HS +++HRDLK N+LI ++ K++DFG R + W APE++
Sbjct: 118 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 177
Query: 423 -EQCSDKIDIWSYGIVLWELLTCETPY---KDVDS-----------SAIIW-GVGSSSLH 466
+ S +DIWS G + E++T + ++D ++W GV S +
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 467 LP-------------IPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
P +P DG LL +M + P+ R S K L+H
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD-PNKRISAKAALAH 284
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 86/174 (49%), Gaps = 16/174 (9%)
Query: 344 EEVPPQRLYN----------WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDF 393
EE P+ LY ++ Q+A GM +L S++ IHRDL + N+L+ K KI DF
Sbjct: 185 EEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDF 244
Query: 394 GTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYK 449
G R+ + + WMAPE I + + + D+WS+G++LWE+ + +PY
Sbjct: 245 GLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 304
Query: 450 DVDSSAIIWGVGSSSLHLPIPS-TCPDGFQLLMKMCWSNAPSSRPSFKQILSHL 502
V + P T P+ +Q ++ CW PS RP+F +++ HL
Sbjct: 305 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHL 357
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 9/76 (11%)
Query: 159 FLAG--CTTPDALAESIGLGVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMA 213
FLA C D A +I L+ K KI DFG R+ + + WMA
Sbjct: 215 FLASRKCIHRDLAARNI----LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 270
Query: 214 PEVIRNEQCSDKIDIW 229
PE I + + + D+W
Sbjct: 271 PETIFDRVYTIQSDVW 286
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 107/222 (48%), Gaps = 31/222 (13%)
Query: 252 LRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI--VAVKKVREQK------------- 296
LRDE+ + + LGSGA G V R VA+K + ++K
Sbjct: 14 LRDEYIMS-------KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL 66
Query: 297 --ETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNW 354
ET+I L+KLNHP I+K K A Y IV+E G L++ + + + +
Sbjct: 67 NVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 125
Query: 355 ARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEE---AKISDFGTCREWNNKSTKMSFAGT 411
Q+ + YLH IIHRDLK NVL+ S+EE KI+DFG + S + GT
Sbjct: 126 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 185
Query: 412 VAWMAPEVIRNEQCSD---KIDIWSYGIVLWELLTCETPYKD 450
++APEV+ + + +D WS G++L+ L+ P+ +
Sbjct: 186 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 227
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 177 VLIGSKEE---AKISDFGTCREWNNKSTKMSFAGTVAWMAPEVI 217
VL+ S+EE KI+DFG + S + GT ++APEV+
Sbjct: 151 VLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 194
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 107/222 (48%), Gaps = 31/222 (13%)
Query: 252 LRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI--VAVKKVREQK------------- 296
LRDE+ + + LGSGA G V R VA+K + ++K
Sbjct: 8 LRDEYIMS-------KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL 60
Query: 297 --ETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNW 354
ET+I L+KLNHP I+K K A Y IV+E G L++ + + + +
Sbjct: 61 NVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 119
Query: 355 ARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEE---AKISDFGTCREWNNKSTKMSFAGT 411
Q+ + YLH IIHRDLK NVL+ S+EE KI+DFG + S + GT
Sbjct: 120 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 179
Query: 412 VAWMAPEVIRNEQCSD---KIDIWSYGIVLWELLTCETPYKD 450
++APEV+ + + +D WS G++L+ L+ P+ +
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 177 VLIGSKEE---AKISDFGTCREWNNKSTKMSFAGTVAWMAPEVI 217
VL+ S+EE KI+DFG + S + GT ++APEV+
Sbjct: 145 VLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 188
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 107/222 (48%), Gaps = 31/222 (13%)
Query: 252 LRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI--VAVKKVREQK------------- 296
LRDE+ + + LGSGA G V R VA+K + ++K
Sbjct: 8 LRDEYIMS-------KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL 60
Query: 297 --ETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNW 354
ET+I L+KLNHP I+K K A Y IV+E G L++ + + + +
Sbjct: 61 NVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 119
Query: 355 ARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEE---AKISDFGTCREWNNKSTKMSFAGT 411
Q+ + YLH IIHRDLK NVL+ S+EE KI+DFG + S + GT
Sbjct: 120 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 179
Query: 412 VAWMAPEVIRNEQCSD---KIDIWSYGIVLWELLTCETPYKD 450
++APEV+ + + +D WS G++L+ L+ P+ +
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 177 VLIGSKEE---AKISDFGTCREWNNKSTKMSFAGTVAWMAPEVI 217
VL+ S+EE KI+DFG + S + GT ++APEV+
Sbjct: 145 VLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 188
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 86/174 (49%), Gaps = 16/174 (9%)
Query: 344 EEVPPQRLYN----------WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDF 393
EE P+ LY ++ Q+A GM +L S++ IHRDL + N+L+ K KI DF
Sbjct: 178 EEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDF 237
Query: 394 GTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYK 449
G R+ + + WMAPE I + + + D+WS+G++LWE+ + +PY
Sbjct: 238 GLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 297
Query: 450 DVDSSAIIWGVGSSSLHLPIPS-TCPDGFQLLMKMCWSNAPSSRPSFKQILSHL 502
V + P T P+ +Q ++ CW PS RP+F +++ HL
Sbjct: 298 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHL 350
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 9/76 (11%)
Query: 159 FLAG--CTTPDALAESIGLGVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMA 213
FLA C D A +I L+ K KI DFG R+ + + WMA
Sbjct: 208 FLASRKCIHRDLAARNI----LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 263
Query: 214 PEVIRNEQCSDKIDIW 229
PE I + + + D+W
Sbjct: 264 PETIFDRVYTIQSDVW 279
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 85/160 (53%), Gaps = 4/160 (2%)
Query: 293 REQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLY 352
RE+ E ++ LR++ H N++ V +++E + G L++ L E + +
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 353 NWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKE----EAKISDFGTCREWNNKSTKMSF 408
++ +QI G+NYLH+K+I H DLK N+++ K K+ DFG E + +
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178
Query: 409 AGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
GT ++APE++ E + D+WS G++ + LL+ +P+
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 11/200 (5%)
Query: 259 PFESISDLQWLGSGAQGAV--FSGKLRSEIVAVKKV-------REQKETDIRHLRKLNHP 309
P E +++ +G G+ G V + K + VAVKK+ RE ++ +R +H
Sbjct: 43 PREYLANFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHD 102
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQ 369
N+V +VME+ G L +++ + +++ + ++YLH++
Sbjct: 103 NVVDMYSSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIATVCLSVLRALSYLHNQG 161
Query: 370 IIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMS-FAGTVAWMAPEVIRNEQCSDK 428
+IHRD+KS ++L+ S K+SDFG C + + + K GT WMAPEVI +
Sbjct: 162 VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTE 221
Query: 429 IDIWSYGIVLWELLTCETPY 448
+DIWS GI++ E++ E PY
Sbjct: 222 VDIWSLGIMVIEMIDGEPPY 241
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMS-FAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ S K+SDFG C + + + K GT WMAPEVI ++DIW
Sbjct: 172 ILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIW 225
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 6/164 (3%)
Query: 344 EEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKS 403
E + + L +++ Q+A GM +L S++ IHRDL + N+L+ KI DFG R+
Sbjct: 194 EPITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNP 253
Query: 404 TKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYKDVDSSAIIWG 459
+ T + WMAPE I ++ S K D+WSYG++LWE+ + +PY V
Sbjct: 254 DYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCS 313
Query: 460 VGSSSLHLPIPS-TCPDGFQLLMKMCWSNAPSSRPSFKQILSHL 502
+ + P + P+ +Q+++ CW P RP F +++ L
Sbjct: 314 RLREGMRMRAPEYSTPEIYQIMLD-CWHRDPKERPRFAELVEKL 356
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 45/104 (43%), Gaps = 17/104 (16%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFSGKL-------RSEIVAVKKVREQKE--------TD 299
+WE E + + LG GA G V VAVK ++E T+
Sbjct: 21 KWEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTE 80
Query: 300 IRHLRKLNHP-NIVKFKGVCT-QAPCYCIVMEYCAYGPLYNLLK 341
++ L + H N+V G CT Q +++EYC YG L N LK
Sbjct: 81 LKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLK 124
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIW 229
+L+ KI DFG R+ + T + WMAPE I ++ S K D+W
Sbjct: 230 ILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVW 285
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 86/174 (49%), Gaps = 16/174 (9%)
Query: 344 EEVPPQRLYN----------WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDF 393
EE P+ LY ++ Q+A GM +L S++ IHRDL + N+L+ K KI DF
Sbjct: 176 EEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDF 235
Query: 394 GTCREWNNKSTKMSFAGT---VAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTC-ETPYK 449
G R+ + + WMAPE I + + + D+WS+G++LWE+ + +PY
Sbjct: 236 GLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 295
Query: 450 DVDSSAIIWGVGSSSLHLPIPS-TCPDGFQLLMKMCWSNAPSSRPSFKQILSHL 502
V + P T P+ +Q ++ CW PS RP+F +++ HL
Sbjct: 296 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHL 348
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 9/76 (11%)
Query: 159 FLAG--CTTPDALAESIGLGVLIGSKEEAKISDFGTCREWNNKSTKMSFAGT---VAWMA 213
FLA C D A +I L+ K KI DFG R+ + + WMA
Sbjct: 206 FLASRKCIHRDLAARNI----LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 261
Query: 214 PEVIRNEQCSDKIDIW 229
PE I + + + D+W
Sbjct: 262 PETIFDRVYTIQSDVW 277
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 107/222 (48%), Gaps = 31/222 (13%)
Query: 252 LRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI--VAVKKVREQK------------- 296
LRDE+ + + LGSGA G V R VA+K + ++K
Sbjct: 8 LRDEYIMS-------KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL 60
Query: 297 --ETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNW 354
ET+I L+KLNHP I+K K A Y IV+E G L++ + + + +
Sbjct: 61 NVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 119
Query: 355 ARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEE---AKISDFGTCREWNNKSTKMSFAGT 411
Q+ + YLH IIHRDLK NVL+ S+EE KI+DFG + S + GT
Sbjct: 120 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 179
Query: 412 VAWMAPEVIRNEQCSD---KIDIWSYGIVLWELLTCETPYKD 450
++APEV+ + + +D WS G++L+ L+ P+ +
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 177 VLIGSKEE---AKISDFGTCREWNNKSTKMSFAGTVAWMAPEVI 217
VL+ S+EE KI+DFG + S + GT ++APEV+
Sbjct: 145 VLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 188
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 107/222 (48%), Gaps = 31/222 (13%)
Query: 252 LRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI--VAVKKVREQK------------- 296
LRDE+ + + LGSGA G V R VA+K + ++K
Sbjct: 7 LRDEYIMS-------KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL 59
Query: 297 --ETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNW 354
ET+I L+KLNHP I+K K A Y IV+E G L++ + + + +
Sbjct: 60 NVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 118
Query: 355 ARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEE---AKISDFGTCREWNNKSTKMSFAGT 411
Q+ + YLH IIHRDLK NVL+ S+EE KI+DFG + S + GT
Sbjct: 119 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 178
Query: 412 VAWMAPEVIRNEQCSD---KIDIWSYGIVLWELLTCETPYKD 450
++APEV+ + + +D WS G++L+ L+ P+ +
Sbjct: 179 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 220
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 177 VLIGSKEE---AKISDFGTCREWNNKSTKMSFAGTVAWMAPEVI 217
VL+ S+EE KI+DFG + S + GT ++APEV+
Sbjct: 144 VLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 187
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 85/160 (53%), Gaps = 4/160 (2%)
Query: 293 REQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLY 352
RE+ E ++ LR++ H N++ V +++E + G L++ L E + +
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 353 NWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKE----EAKISDFGTCREWNNKSTKMSF 408
++ +QI G+NYLH+K+I H DLK N+++ K K+ DFG E + +
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178
Query: 409 AGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
GT ++APE++ E + D+WS G++ + LL+ +P+
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 85/160 (53%), Gaps = 4/160 (2%)
Query: 293 REQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLY 352
RE+ E ++ LR++ H N++ V +++E + G L++ L E + +
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 353 NWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKE----EAKISDFGTCREWNNKSTKMSF 408
++ +QI G+NYLH+K+I H DLK N+++ K K+ DFG E + +
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178
Query: 409 AGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
GT ++APE++ E + D+WS G++ + LL+ +P+
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 85/160 (53%), Gaps = 4/160 (2%)
Query: 293 REQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLY 352
RE+ E ++ LR++ H N++ V +++E + G L++ L E + +
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 353 NWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKE----EAKISDFGTCREWNNKSTKMSF 408
++ +QI G+NYLH+K+I H DLK N+++ K K+ DFG E + +
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178
Query: 409 AGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
GT ++APE++ E + D+WS G++ + LL+ +P+
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 85/160 (53%), Gaps = 4/160 (2%)
Query: 293 REQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLY 352
RE+ E ++ LR++ H N++ V +++E + G L++ L E + +
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 353 NWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKE----EAKISDFGTCREWNNKSTKMSF 408
++ +QI G+NYLH+K+I H DLK N+++ K K+ DFG E + +
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178
Query: 409 AGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
GT ++APE++ E + D+WS G++ + LL+ +P+
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 99/202 (49%), Gaps = 24/202 (11%)
Query: 261 ESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQKETD---------IRHLRKLNHP 309
E+ ++ +G G G V+ KL E+VA+KK+R ET+ I L++LNHP
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE------VPPQRLYNWARQIAAGMN 363
NIVK V +V E+ + LKD + +P + ++ Q+ G+
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLSMD-----LKDFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIRN 422
+ HS +++HRDLK N+LI ++ K++DFG R + W APE++
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 179
Query: 423 -EQCSDKIDIWSYGIVLWELLT 443
+ S +DIWS G + E++T
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 99/202 (49%), Gaps = 24/202 (11%)
Query: 261 ESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQKETD---------IRHLRKLNHP 309
E+ ++ +G G G V+ KL E+VA+KK+R ET+ I L++LNHP
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE------VPPQRLYNWARQIAAGMN 363
NIVK V +V E+ + LKD + +P + ++ Q+ G+
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLSMD-----LKDFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIRN 422
+ HS +++HRDLK N+LI ++ K++DFG R + W APE++
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 180
Query: 423 -EQCSDKIDIWSYGIVLWELLT 443
+ S +DIWS G + E++T
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 21/213 (9%)
Query: 257 EIPFESISDLQWLGSGAQGAVF---------SGKLRSEIVAVKKVREQKETDIRHLRK-- 305
++ E+ L+ LG+GA G VF +GKL + V K QK H R
Sbjct: 50 KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTER 109
Query: 306 --LNH----PNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIA 359
L H P +V ++++Y G L+ L E + + +I
Sbjct: 110 QVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIV 169
Query: 360 AGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMS--FAGTVAWMAP 417
+ +LH II+RD+K N+L+ S ++DFG +E+ T+ + F GT+ +MAP
Sbjct: 170 LALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAP 229
Query: 418 EVIR-NEQCSDK-IDIWSYGIVLWELLTCETPY 448
+++R + DK +D WS G++++ELLT +P+
Sbjct: 230 DIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF 262
Score = 35.4 bits (80), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMS--FAGTVAWMAPEVIR-NEQCSDK-IDIWYKN 232
+L+ S ++DFG +E+ T+ + F GT+ +MAP+++R + DK +D W
Sbjct: 190 ILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLG 249
Query: 233 RLCF 236
L +
Sbjct: 250 VLMY 253
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 107/217 (49%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 18 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 73
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-SQKLTDDHVQFLIY 132
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI DFG CR +++ T + T + A
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMT--GYVATRWYRA 190
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 179 IGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRN-EQCSDKIDIW 229
+ E KI DFG CR +++ T + T + APE++ N + +DIW
Sbjct: 158 VNEDSELKILDFGLCRHTDDEMT--GYVATRWYRAPEIMLNWMHYNQTVDIW 207
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 130/288 (45%), Gaps = 53/288 (18%)
Query: 261 ESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQKETD---------IRHLRKLNHP 309
E+ ++ +G G G V+ KL E+VA+KK+R ET+ I L++LNHP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE------VPPQRLYNWARQIAAGMN 363
NIVK V +V E+ L+ LK + +P + ++ Q+ G++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLS 117
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIRN 422
+ HS +++HRDLK N+LI ++ K++DFG R + + W APE++
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 423 -EQCSDKIDIWSYGIVLWELLTCETPY---KDVDS-----------SAIIW-GVGSSSLH 466
+ S +DIWS G + E++T + ++D ++W GV S +
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 467 LP-------------IPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
P +P DG LL +M + P+ R S K L+H
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD-PNKRISAKAALAH 284
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 129/288 (44%), Gaps = 53/288 (18%)
Query: 261 ESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQKETD---------IRHLRKLNHP 309
E+ ++ +G G G V+ KL E+VA+KK+R ET+ I L++LNHP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE------VPPQRLYNWARQIAAGMN 363
NIVK V +V E+ L+ LK + +P + ++ Q+ G+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIRN 422
+ HS +++HRDLK N+LI ++ K++DFG R + + W APE++
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 423 EQ-CSDKIDIWSYGIVLWELLTCETPY---KDVDS-----------SAIIW-GVGSSSLH 466
+ S +DIWS G + E++T + ++D ++W GV S +
Sbjct: 178 XKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 467 LP-------------IPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
P +P DG LL +M + P+ R S K L+H
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD-PNKRISAKAALAH 284
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 110/239 (46%), Gaps = 33/239 (13%)
Query: 250 FVLRDEWEIPFESISDLQWLGSGAQGAVF----------------------SGKLRSEIV 287
+V + E +I ES ++ LGSGA G V G+ +
Sbjct: 26 YVRKKEGKIG-ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNK 84
Query: 288 AVKKVREQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVP 347
++K E+ +I L+ L+HPNI+K V + +V E+ G L+ + + +
Sbjct: 85 NIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFD 144
Query: 348 PQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKE---EAKISDFGTCREWNNKST 404
N +QI +G+ YLH I+HRD+K N+L+ +K KI DFG ++
Sbjct: 145 ECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK 204
Query: 405 KMSFAGTVAWMAPEVIR---NEQCSDKIDIWSYGIVLWELLTCETPYKDVDSSAIIWGV 460
GT ++APEV++ NE+C D+WS G++++ LL P+ + II V
Sbjct: 205 LRDRLGTAYYIAPEVLKKKYNEKC----DVWSCGVIMYILLCGYPPFGGQNDQDIIKKV 259
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 93/183 (50%), Gaps = 5/183 (2%)
Query: 271 SGAQ-GAVFSGKLRSEIVAVKKVREQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVME 329
+G Q A F K R++ RE E ++ L+++ HPN++ V +++E
Sbjct: 34 TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILE 93
Query: 330 YCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGS----K 385
A G L++ L + E + + + +QI G+ YLHS QI H DLK N+++ K
Sbjct: 94 LVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK 153
Query: 386 EEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCE 445
KI DFG + + + + GT ++APE++ E + D+WS G++ + LL+
Sbjct: 154 PRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 213
Query: 446 TPY 448
+P+
Sbjct: 214 SPF 216
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 24/48 (50%)
Query: 182 KEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
K KI DFG + + + + GT ++APE++ E + D+W
Sbjct: 153 KPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMW 200
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 93/183 (50%), Gaps = 5/183 (2%)
Query: 271 SGAQ-GAVFSGKLRSEIVAVKKVREQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVME 329
+G Q A F K R++ RE E ++ L+++ HPN++ V +++E
Sbjct: 34 TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILE 93
Query: 330 YCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGS----K 385
A G L++ L + E + + + +QI G+ YLHS QI H DLK N+++ K
Sbjct: 94 LVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK 153
Query: 386 EEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCE 445
KI DFG + + + + GT ++APE++ E + D+WS G++ + LL+
Sbjct: 154 PRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 213
Query: 446 TPY 448
+P+
Sbjct: 214 SPF 216
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 24/48 (50%)
Query: 182 KEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
K KI DFG + + + + GT ++APE++ E + D+W
Sbjct: 153 KPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMW 200
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 93/183 (50%), Gaps = 5/183 (2%)
Query: 271 SGAQ-GAVFSGKLRSEIVAVKKVREQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVME 329
+G Q A F K R++ RE E ++ L+++ HPN++ V +++E
Sbjct: 35 TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILE 94
Query: 330 YCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGS----K 385
A G L++ L + E + + + +QI G+ YLHS QI H DLK N+++ K
Sbjct: 95 LVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK 154
Query: 386 EEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCE 445
KI DFG + + + + GT ++APE++ E + D+WS G++ + LL+
Sbjct: 155 PRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 214
Query: 446 TPY 448
+P+
Sbjct: 215 SPF 217
Score = 28.9 bits (63), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 24/48 (50%)
Query: 182 KEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
K KI DFG + + + + GT ++APE++ E + D+W
Sbjct: 154 KPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMW 201
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 93/183 (50%), Gaps = 5/183 (2%)
Query: 271 SGAQ-GAVFSGKLRSEIVAVKKVREQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVME 329
+G Q A F K R++ RE E ++ L+++ HPN++ V +++E
Sbjct: 35 TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILE 94
Query: 330 YCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGS----K 385
A G L++ L + E + + + +QI G+ YLHS QI H DLK N+++ K
Sbjct: 95 LVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK 154
Query: 386 EEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCE 445
KI DFG + + + + GT ++APE++ E + D+WS G++ + LL+
Sbjct: 155 PRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 214
Query: 446 TPY 448
+P+
Sbjct: 215 SPF 217
Score = 28.9 bits (63), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 24/48 (50%)
Query: 182 KEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
K KI DFG + + + + GT ++APE++ E + D+W
Sbjct: 154 KPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMW 201
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 129/284 (45%), Gaps = 51/284 (17%)
Query: 260 FESISDLQWLGSGAQGAVFSGK--LRSEIVAVKKVREQKE------TDIRHLRKLNHPNI 311
FE I+ LG GA G V + L S A+KK+R +E +++ L LNH +
Sbjct: 8 FEEIA---VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYV 64
Query: 312 VKFKGV-------------CTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWA--R 356
V++ + I MEYC G LY+L+ E + QR W R
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIH-SENLNQQRDEYWRLFR 123
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWN---------------N 401
QI ++Y+HS+ IIHRDLK N+ I KI DFG + + +
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 402 KSTKMSFAGTVAWMAPEVIRNE-QCSDKIDIWSYGIVLWELLTCETPYK-DVDSSAIIWG 459
S GT ++A EV+ ++KID++S GI+ +E++ P+ ++ I+
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTGMERVNILKK 240
Query: 460 VGSSSLHLPIPSTCPDGFQL---LMKMCWSNAPSSRPSFKQILS 500
+ S S+ P P + ++ ++++ + P+ RP + +L+
Sbjct: 241 LRSVSIEFP-PDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 93/183 (50%), Gaps = 5/183 (2%)
Query: 271 SGAQ-GAVFSGKLRSEIVAVKKVREQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVME 329
+G Q A F K R++ RE E ++ L+++ HPN++ V +++E
Sbjct: 35 TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILE 94
Query: 330 YCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGS----K 385
A G L++ L + E + + + +QI G+ YLHS QI H DLK N+++ K
Sbjct: 95 LVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK 154
Query: 386 EEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCE 445
KI DFG + + + + GT ++APE++ E + D+WS G++ + LL+
Sbjct: 155 PRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 214
Query: 446 TPY 448
+P+
Sbjct: 215 SPF 217
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 24/48 (50%)
Query: 182 KEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
K KI DFG + + + + GT ++APE++ E + D+W
Sbjct: 154 KPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMW 201
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 84/160 (52%), Gaps = 4/160 (2%)
Query: 293 REQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLY 352
RE E ++ L+++ HPN++ V +++E A G L++ L + E + +
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 353 NWARQIAAGMNYLHSKQIIHRDLKSPNVLIGS----KEEAKISDFGTCREWNNKSTKMSF 408
+ +QI G+ YLHS QI H DLK N+++ K KI DFG + + + +
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 409 AGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
GT ++APE++ E + D+WS G++ + LL+ +P+
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Score = 28.9 bits (63), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 24/48 (50%)
Query: 182 KEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
K KI DFG + + + + GT ++APE++ E + D+W
Sbjct: 154 KPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMW 201
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 84/160 (52%), Gaps = 4/160 (2%)
Query: 293 REQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLY 352
RE E ++ L+++ HPN++ V +++E A G L++ L + E + +
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 353 NWARQIAAGMNYLHSKQIIHRDLKSPNVLIGS----KEEAKISDFGTCREWNNKSTKMSF 408
+ +QI G+ YLHS QI H DLK N+++ K KI DFG + + + +
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 409 AGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
GT ++APE++ E + D+WS G++ + LL+ +P+
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Score = 28.9 bits (63), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 24/48 (50%)
Query: 182 KEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
K KI DFG + + + + GT ++APE++ E + D+W
Sbjct: 154 KPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMW 201
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 84/160 (52%), Gaps = 4/160 (2%)
Query: 293 REQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLY 352
RE E ++ L+++ HPN++ V +++E A G L++ L + E + +
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 353 NWARQIAAGMNYLHSKQIIHRDLKSPNVLIGS----KEEAKISDFGTCREWNNKSTKMSF 408
+ +QI G+ YLHS QI H DLK N+++ K KI DFG + + + +
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 409 AGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
GT ++APE++ E + D+WS G++ + LL+ +P+
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Score = 28.9 bits (63), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 24/48 (50%)
Query: 182 KEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
K KI DFG + + + + GT ++APE++ E + D+W
Sbjct: 154 KPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMW 201
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 84/160 (52%), Gaps = 4/160 (2%)
Query: 293 REQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLY 352
RE E ++ L+++ HPN++ V +++E A G L++ L + E + +
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 353 NWARQIAAGMNYLHSKQIIHRDLKSPNVLIGS----KEEAKISDFGTCREWNNKSTKMSF 408
+ +QI G+ YLHS QI H DLK N+++ K KI DFG + + + +
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 409 AGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
GT ++APE++ E + D+WS G++ + LL+ +P+
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 121/264 (45%), Gaps = 22/264 (8%)
Query: 258 IPFESISDLQWLGSGAQGAVFSGKLRSEIVAVK--KVRE---QKETDIR----HLRKLNH 308
I F+ ++ L L G ++ G+ + + VK KVR+ +K D LR +H
Sbjct: 7 IDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 309 PNIVKFKGVCTQ--APCYCIVMEYCAYGPLYNLLKDGEE--VPPQRLYNWARQIAAGMNY 364
PN++ G C AP ++ + YG LYN+L +G V + +A A G +
Sbjct: 67 PNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAF 126
Query: 365 LHSKQ--IIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRN 422
LH+ + I L S +V I A+IS +++ +S +A AW+APE ++
Sbjct: 127 LHTLEPLIPRHALNSRSVXIDEDXTARISXADV--KFSFQSPGRXYAP--AWVAPEALQK 182
Query: 423 ---EQCSDKIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQL 479
+ D WS+ ++LWEL+T E P+ D+ + I V L IP
Sbjct: 183 KPEDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIGXKVALEGLRPTIPPGISPHVSK 242
Query: 480 LMKMCWSNAPSSRPSFKQILSHLD 503
L K+C + P+ RP F I+ L+
Sbjct: 243 LXKICXNEDPAKRPKFDXIVPILE 266
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 100/202 (49%), Gaps = 24/202 (11%)
Query: 261 ESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQKETD---------IRHLRKLNHP 309
E+ ++ +G G G V+ KL E+VA+KK+R ET+ I L++LNHP
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE------VPPQRLYNWARQIAAGMN 363
NIVK V +V E+ L+ LK + +P + ++ Q+ G+
Sbjct: 70 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 124
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIRN 422
+ HS +++HRDLK N+LI ++ K++DFG R + + W APE++
Sbjct: 125 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 184
Query: 423 EQ-CSDKIDIWSYGIVLWELLT 443
+ S +DIWS G + E++T
Sbjct: 185 XKYYSTAVDIWSLGCIFAEMVT 206
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 84/160 (52%), Gaps = 4/160 (2%)
Query: 293 REQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLY 352
RE E ++ L+++ HPN++ V +++E A G L++ L + E + +
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 353 NWARQIAAGMNYLHSKQIIHRDLKSPNVLIGS----KEEAKISDFGTCREWNNKSTKMSF 408
+ +QI G+ YLHS QI H DLK N+++ K KI DFG + + + +
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 409 AGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
GT ++APE++ E + D+WS G++ + LL+ +P+
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 130/291 (44%), Gaps = 53/291 (18%)
Query: 258 IPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQKETD---------IRHLRKL 306
+ E+ ++ +G G G V+ KL E+VA+KK+R ET+ I L++L
Sbjct: 4 VDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 307 NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE------VPPQRLYNWARQIAA 360
NHPNIVK V +V E+ L+ LK + +P + ++ Q+
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 118
Query: 361 GMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEV 419
G+ + HS +++HRDLK N+LI ++ K++DFG R + + W APE+
Sbjct: 119 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 178
Query: 420 IRN-EQCSDKIDIWSYGIVLWELLTCETPY---KDVDS-----------SAIIW-GVGSS 463
+ + S +DIWS G + E++T + ++D ++W GV S
Sbjct: 179 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 238
Query: 464 SLHLP-------------IPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
+ P +P DG LL +M + P+ R S K L+H
Sbjct: 239 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD-PNKRISAKAALAH 288
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 107/222 (48%), Gaps = 31/222 (13%)
Query: 252 LRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI--VAVKKVREQK------------- 296
LRDE+ + + LGSGA G V R VA++ + ++K
Sbjct: 147 LRDEYIMS-------KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPAL 199
Query: 297 --ETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNW 354
ET+I L+KLNHP I+K K A Y IV+E G L++ + + + +
Sbjct: 200 NVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 258
Query: 355 ARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEE---AKISDFGTCREWNNKSTKMSFAGT 411
Q+ + YLH IIHRDLK NVL+ S+EE KI+DFG + S + GT
Sbjct: 259 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 318
Query: 412 VAWMAPEVIRNEQCSD---KIDIWSYGIVLWELLTCETPYKD 450
++APEV+ + + +D WS G++L+ L+ P+ +
Sbjct: 319 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 360
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 177 VLIGSKEE---AKISDFGTCREWNNKSTKMSFAGTVAWMAPEVI 217
VL+ S+EE KI+DFG + S + GT ++APEV+
Sbjct: 284 VLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 327
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 129/288 (44%), Gaps = 53/288 (18%)
Query: 261 ESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQKETD---------IRHLRKLNHP 309
E+ ++ +G G G V+ KL E+VA+KK+R ET+ I L++LNHP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE------VPPQRLYNWARQIAAGMN 363
NIVK V +V E+ L+ LK + +P + ++ Q+ G+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIRN 422
+ HS +++HRDLK N+LI ++ K++DFG R + + W APE++
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 423 -EQCSDKIDIWSYGIVLWELLTCETPY---KDVDS-----------SAIIW-GVGSSSLH 466
+ S +DIWS G + E++T + ++D ++W GV S +
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 467 LP-------------IPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
P +P DG LL +M + P+ R S K L+H
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD-PNKRISAKAALAH 284
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 129/288 (44%), Gaps = 53/288 (18%)
Query: 261 ESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQKETD---------IRHLRKLNHP 309
E+ ++ +G G G V+ KL E+VA+KK+R ET+ I L++LNHP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE------VPPQRLYNWARQIAAGMN 363
NIVK V +V E+ L+ LK + +P + ++ Q+ G+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIRN 422
+ HS +++HRDLK N+LI ++ K++DFG R + + W APE++
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 176
Query: 423 -EQCSDKIDIWSYGIVLWELLTCETPY---KDVDS-----------SAIIW-GVGSSSLH 466
+ S +DIWS G + E++T + ++D ++W GV S +
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 467 LP-------------IPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
P +P DG LL +M + P+ R S K L+H
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD-PNKRISAKAALAH 283
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 108/219 (49%), Gaps = 4/219 (1%)
Query: 282 LRSEIVAVKKVREQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK 341
+ +++A ++ + E +I +LR L HP+I+K V +V+EY A L++ +
Sbjct: 47 INKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIV 105
Query: 342 DGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNN 401
+++ Q + +QI + + Y H +I+HRDLK N+L+ KI+DFG +
Sbjct: 106 QRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 165
Query: 402 KSTKMSFAGTVAWMAPEVIRNE-QCSDKIDIWSYGIVLWELLTCETPYKDVDSSAIIWGV 460
+ + G+ + APEVI + ++D+WS G++L+ +L P+ D + +
Sbjct: 166 GNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNI 225
Query: 461 GSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQIL 499
+ LP P L+ +M N P +R S +I+
Sbjct: 226 SNGVYTLP-KFLSPGAAGLIKRMLIVN-PLNRISIHEIM 262
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 93/183 (50%), Gaps = 5/183 (2%)
Query: 271 SGAQ-GAVFSGKLRSEIVAVKKVREQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVME 329
+G Q A F K R++ RE E ++ L+++ HPN++ V +++E
Sbjct: 35 TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILE 94
Query: 330 YCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGS----K 385
A G L++ L + E + + + +QI G+ YLHS QI H DLK N+++ K
Sbjct: 95 LVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK 154
Query: 386 EEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCE 445
KI DFG + + + + GT ++APE++ E + D+WS G++ + LL+
Sbjct: 155 PRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 214
Query: 446 TPY 448
+P+
Sbjct: 215 SPF 217
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 129/288 (44%), Gaps = 53/288 (18%)
Query: 261 ESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQKETD---------IRHLRKLNHP 309
E+ ++ +G G G V+ KL E+VA+KK+R ET+ I L++LNHP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE------VPPQRLYNWARQIAAGMN 363
NIVK V +V E+ L+ LK + +P + ++ Q+ G+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIRN 422
+ HS +++HRDLK N+LI ++ K++DFG R + + W APE++
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 176
Query: 423 -EQCSDKIDIWSYGIVLWELLTCETPY---KDVDS-----------SAIIW-GVGSSSLH 466
+ S +DIWS G + E++T + ++D ++W GV S +
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 467 LP-------------IPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
P +P DG LL +M + P+ R S K L+H
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD-PNKRISAKAALAH 283
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 84/160 (52%), Gaps = 4/160 (2%)
Query: 293 REQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLY 352
RE E ++ L+++ HPN++ V +++E A G L++ L + E + +
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 353 NWARQIAAGMNYLHSKQIIHRDLKSPNVLIGS----KEEAKISDFGTCREWNNKSTKMSF 408
+ +QI G+ YLHS QI H DLK N+++ K KI DFG + + + +
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 409 AGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
GT ++APE++ E + D+WS G++ + LL+ +P+
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 129/288 (44%), Gaps = 53/288 (18%)
Query: 261 ESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQKETD---------IRHLRKLNHP 309
E+ ++ +G G G V+ KL E+VA+KK+R ET+ I L++LNHP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE------VPPQRLYNWARQIAAGMN 363
NIVK V +V E+ L+ LK + +P + ++ Q+ G+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIRN 422
+ HS +++HRDLK N+LI ++ K++DFG R + + W APE++
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 423 -EQCSDKIDIWSYGIVLWELLTCETPY---KDVDS-----------SAIIW-GVGSSSLH 466
+ S +DIWS G + E++T + ++D ++W GV S +
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 467 LP-------------IPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
P +P DG LL +M + P+ R S K L+H
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD-PNKRISAKAALAH 284
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 129/288 (44%), Gaps = 53/288 (18%)
Query: 261 ESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQKETD---------IRHLRKLNHP 309
E+ ++ +G G G V+ KL E+VA+KK+R ET+ I L++LNHP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE------VPPQRLYNWARQIAAGMN 363
NIVK V +V E+ L+ LK + +P + ++ Q+ G+
Sbjct: 64 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIRN 422
+ HS +++HRDLK N+LI ++ K++DFG R + + W APE++
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 178
Query: 423 -EQCSDKIDIWSYGIVLWELLTCETPY---KDVDS-----------SAIIW-GVGSSSLH 466
+ S +DIWS G + E++T + ++D ++W GV S +
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 238
Query: 467 LP-------------IPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
P +P DG LL +M + P+ R S K L+H
Sbjct: 239 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD-PNKRISAKAALAH 285
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 108/219 (49%), Gaps = 4/219 (1%)
Query: 282 LRSEIVAVKKVREQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK 341
+ +++A ++ + E +I +LR L HP+I+K V +V+EY A L++ +
Sbjct: 37 INKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIV 95
Query: 342 DGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNN 401
+++ Q + +QI + + Y H +I+HRDLK N+L+ KI+DFG +
Sbjct: 96 QRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 155
Query: 402 KSTKMSFAGTVAWMAPEVIRNE-QCSDKIDIWSYGIVLWELLTCETPYKDVDSSAIIWGV 460
+ + G+ + APEVI + ++D+WS G++L+ +L P+ D + +
Sbjct: 156 GNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNI 215
Query: 461 GSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQIL 499
+ LP P L+ +M N P +R S +I+
Sbjct: 216 SNGVYTLP-KFLSPGAAGLIKRMLIVN-PLNRISIHEIM 252
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 108/219 (49%), Gaps = 4/219 (1%)
Query: 282 LRSEIVAVKKVREQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK 341
+ +++A ++ + E +I +LR L HP+I+K V +V+EY A L++ +
Sbjct: 41 INKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIV 99
Query: 342 DGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNN 401
+++ Q + +QI + + Y H +I+HRDLK N+L+ KI+DFG +
Sbjct: 100 QRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 159
Query: 402 KSTKMSFAGTVAWMAPEVIRNE-QCSDKIDIWSYGIVLWELLTCETPYKDVDSSAIIWGV 460
+ + G+ + APEVI + ++D+WS G++L+ +L P+ D + +
Sbjct: 160 GNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNI 219
Query: 461 GSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQIL 499
+ LP P L+ +M N P +R S +I+
Sbjct: 220 SNGVYTLP-KFLSPGAAGLIKRMLIVN-PLNRISIHEIM 256
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 108/219 (49%), Gaps = 4/219 (1%)
Query: 282 LRSEIVAVKKVREQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK 341
+ +++A ++ + E +I +LR L HP+I+K V +V+EY A L++ +
Sbjct: 46 INKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIV 104
Query: 342 DGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNN 401
+++ Q + +QI + + Y H +I+HRDLK N+L+ KI+DFG +
Sbjct: 105 QRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164
Query: 402 KSTKMSFAGTVAWMAPEVIRNE-QCSDKIDIWSYGIVLWELLTCETPYKDVDSSAIIWGV 460
+ + G+ + APEVI + ++D+WS G++L+ +L P+ D + +
Sbjct: 165 GNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNI 224
Query: 461 GSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQIL 499
+ LP P L+ +M N P +R S +I+
Sbjct: 225 SNGVYTLP-KFLSPGAAGLIKRMLIVN-PLNRISIHEIM 261
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 100/202 (49%), Gaps = 24/202 (11%)
Query: 261 ESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQKETD---------IRHLRKLNHP 309
E+ ++ +G G G V+ KL E+VA+KK+R ET+ I L++LNHP
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE------VPPQRLYNWARQIAAGMN 363
NIVK V +V E+ L+ LK + +P + ++ Q+ G+
Sbjct: 70 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 124
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIRN 422
+ HS +++HRDLK N+LI ++ K++DFG R + + W APE++
Sbjct: 125 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 184
Query: 423 -EQCSDKIDIWSYGIVLWELLT 443
+ S +DIWS G + E++T
Sbjct: 185 CKYYSTAVDIWSLGCIFAEMVT 206
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 107/222 (48%), Gaps = 31/222 (13%)
Query: 252 LRDEWEIPFESISDLQWLGSGAQGAVFSGKLRSEI--VAVKKVREQK------------- 296
LRDE+ + + LGSGA G V R VA++ + ++K
Sbjct: 133 LRDEYIMS-------KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPAL 185
Query: 297 --ETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNW 354
ET+I L+KLNHP I+K K A Y IV+E G L++ + + + +
Sbjct: 186 NVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 244
Query: 355 ARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEE---AKISDFGTCREWNNKSTKMSFAGT 411
Q+ + YLH IIHRDLK NVL+ S+EE KI+DFG + S + GT
Sbjct: 245 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 304
Query: 412 VAWMAPEVIRNEQCSD---KIDIWSYGIVLWELLTCETPYKD 450
++APEV+ + + +D WS G++L+ L+ P+ +
Sbjct: 305 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 346
Score = 32.0 bits (71), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 177 VLIGSKEE---AKISDFGTCREWNNKSTKMSFAGTVAWMAPEVI 217
VL+ S+EE KI+DFG + S + GT ++APEV+
Sbjct: 270 VLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 313
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 128/288 (44%), Gaps = 53/288 (18%)
Query: 261 ESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQKETD---------IRHLRKLNHP 309
E+ ++ +G G G V+ KL E+VA+KK+R ET+ I L++LNHP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE------VPPQRLYNWARQIAAGMN 363
NIVK V +V E+ L+ LK + +P + ++ Q+ G+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIRN 422
+ HS +++HRDLK N+LI ++ K++DFG R + W APE++
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 177
Query: 423 -EQCSDKIDIWSYGIVLWELLTCETPY---KDVDS-----------SAIIW-GVGSSSLH 466
+ S +DIWS G + E++T + ++D ++W GV S +
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 467 LP-------------IPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
P +P DG LL +M + P+ R S K L+H
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD-PNKRISAKAALAH 284
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 98/203 (48%), Gaps = 4/203 (1%)
Query: 297 ETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
E +I +L+ L HP+I+K V T +V+EY A G L++ + + + + + +
Sbjct: 57 EREISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQ 115
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI + Y H +I+HRDLK N+L+ KI+DFG + + + G+ + A
Sbjct: 116 QIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAA 175
Query: 417 PEVIRNE-QCSDKIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPD 475
PEVI + ++D+WS GIVL+ +L P+ D + V S + P
Sbjct: 176 PEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVM--PDFLSP 233
Query: 476 GFQLLMKMCWSNAPSSRPSFKQI 498
G Q L++ P R + ++I
Sbjct: 234 GAQSLIRRMIVADPMQRITIQEI 256
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 128/288 (44%), Gaps = 53/288 (18%)
Query: 261 ESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQKETD---------IRHLRKLNHP 309
E+ ++ +G G G V+ KL E+VA+KK+R ET+ I L++LNHP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE------VPPQRLYNWARQIAAGMN 363
NIVK V +V E+ L+ LK + +P + ++ Q+ G+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIRN 422
+ HS +++HRDLK N+LI ++ K++DFG R + W APE++
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 176
Query: 423 -EQCSDKIDIWSYGIVLWELLTCETPY---KDVDS-----------SAIIW-GVGSSSLH 466
+ S +DIWS G + E++T + ++D ++W GV S +
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 467 LP-------------IPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
P +P DG LL +M + P+ R S K L+H
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD-PNKRISAKAALAH 283
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 99/202 (49%), Gaps = 24/202 (11%)
Query: 261 ESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQKETD---------IRHLRKLNHP 309
E+ ++ +G G G V+ KL E+VA+KK+R ET+ I L++LNHP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE------VPPQRLYNWARQIAAGMN 363
NIVK V +V E+ L+ LK + +P + ++ Q+ G+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIRN 422
+ HS +++HRDLK N+LI ++ K++DFG R + W APE++
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 177
Query: 423 -EQCSDKIDIWSYGIVLWELLT 443
+ S +DIWS G + E++T
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 128/288 (44%), Gaps = 53/288 (18%)
Query: 261 ESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQKETD---------IRHLRKLNHP 309
E+ ++ +G G G V+ KL E+VA+KK+R ET+ I L++LNHP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE------VPPQRLYNWARQIAAGMN 363
NIVK V +V E+ L+ LK + +P + ++ Q+ G+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIRN 422
+ HS +++HRDLK N+LI ++ K++DFG R + W APE++
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 177
Query: 423 -EQCSDKIDIWSYGIVLWELLTCETPY---KDVDS-----------SAIIW-GVGSSSLH 466
+ S +DIWS G + E++T + ++D ++W GV S +
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 467 LP-------------IPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
P +P DG LL +M + P+ R S K L+H
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD-PNKRISAKAALAH 284
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 128/288 (44%), Gaps = 53/288 (18%)
Query: 261 ESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQKETD---------IRHLRKLNHP 309
E+ ++ +G G G V+ KL E+VA+KK+R ET+ I L++LNHP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE------VPPQRLYNWARQIAAGMN 363
NIVK V +V E+ L+ LK + +P + ++ Q+ G+
Sbjct: 64 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIRN 422
+ HS +++HRDLK N+LI ++ K++DFG R + W APE++
Sbjct: 119 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 178
Query: 423 -EQCSDKIDIWSYGIVLWELLTCETPY---KDVDS-----------SAIIW-GVGSSSLH 466
+ S +DIWS G + E++T + ++D ++W GV S +
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 238
Query: 467 LP-------------IPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
P +P DG LL +M + P+ R S K L+H
Sbjct: 239 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD-PNKRISAKAALAH 285
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 128/288 (44%), Gaps = 53/288 (18%)
Query: 261 ESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQKETD---------IRHLRKLNHP 309
E+ ++ +G G G V+ KL E+VA+KK+R ET+ I L++LNHP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE------VPPQRLYNWARQIAAGMN 363
NIVK V +V E+ L+ LK + +P + ++ Q+ G+
Sbjct: 64 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIRN 422
+ HS +++HRDLK N+LI ++ K++DFG R + W APE++
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 178
Query: 423 -EQCSDKIDIWSYGIVLWELLTCETPY---KDVDS-----------SAIIW-GVGSSSLH 466
+ S +DIWS G + E++T + ++D ++W GV S +
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 238
Query: 467 LP-------------IPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
P +P DG LL +M + P+ R S K L+H
Sbjct: 239 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD-PNKRISAKAALAH 285
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 128/288 (44%), Gaps = 53/288 (18%)
Query: 261 ESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQKETD---------IRHLRKLNHP 309
E+ ++ +G G G V+ KL E+VA+KK+R ET+ I L++LNHP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE------VPPQRLYNWARQIAAGMN 363
NIVK V +V E+ L+ LK + +P + ++ Q+ G+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIRN 422
+ HS +++HRDLK N+LI ++ K++DFG R + W APE++
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 176
Query: 423 -EQCSDKIDIWSYGIVLWELLTCETPY---KDVDS-----------SAIIW-GVGSSSLH 466
+ S +DIWS G + E++T + ++D ++W GV S +
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 467 LP-------------IPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
P +P DG LL +M + P+ R S K L+H
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD-PNKRISAKAALAH 283
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 128/288 (44%), Gaps = 53/288 (18%)
Query: 261 ESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQKETD---------IRHLRKLNHP 309
E+ ++ +G G G V+ KL E+VA+KK+R ET+ I L++LNHP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE------VPPQRLYNWARQIAAGMN 363
NIVK V +V E+ L+ LK + +P + ++ Q+ G+
Sbjct: 64 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIRN 422
+ HS +++HRDLK N+LI ++ K++DFG R + W APE++
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 178
Query: 423 -EQCSDKIDIWSYGIVLWELLTCETPY---KDVDS-----------SAIIW-GVGSSSLH 466
+ S +DIWS G + E++T + ++D ++W GV S +
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 238
Query: 467 LP-------------IPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
P +P DG LL +M + P+ R S K L+H
Sbjct: 239 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD-PNKRISAKAALAH 285
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 99/202 (49%), Gaps = 24/202 (11%)
Query: 261 ESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQKETD---------IRHLRKLNHP 309
E+ ++ +G G G V+ KL E+VA+KK+R ET+ I L++LNHP
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE------VPPQRLYNWARQIAAGMN 363
NIVK V +V E+ L+ LK + +P + ++ Q+ G+
Sbjct: 65 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIRN 422
+ HS +++HRDLK N+LI ++ K++DFG R + W APE++
Sbjct: 120 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 179
Query: 423 -EQCSDKIDIWSYGIVLWELLT 443
+ S +DIWS G + E++T
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 99/202 (49%), Gaps = 24/202 (11%)
Query: 261 ESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQKETD---------IRHLRKLNHP 309
E+ ++ +G G G V+ KL E+VA+KK+R ET+ I L++LNHP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE------VPPQRLYNWARQIAAGMN 363
NIVK V +V E+ L+ LK + +P + ++ Q+ G+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIRN 422
+ HS +++HRDLK N+LI ++ K++DFG R + W APE++
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 177
Query: 423 -EQCSDKIDIWSYGIVLWELLT 443
+ S +DIWS G + E++T
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 99/202 (49%), Gaps = 24/202 (11%)
Query: 261 ESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQKETD---------IRHLRKLNHP 309
E+ ++ +G G G V+ KL E+VA+KK+R ET+ I L++LNHP
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE------VPPQRLYNWARQIAAGMN 363
NIVK V +V E+ L+ LK + +P + ++ Q+ G+
Sbjct: 66 NIVKLLDVIHTENKLYLVFEF-----LHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIRN 422
+ HS +++HRDLK N+LI ++ K++DFG R + W APE++
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 180
Query: 423 -EQCSDKIDIWSYGIVLWELLT 443
+ S +DIWS G + E++T
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 99/202 (49%), Gaps = 24/202 (11%)
Query: 261 ESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQKETD---------IRHLRKLNHP 309
E+ ++ +G G G V+ KL E+VA+KK+R ET+ I L++LNHP
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE------VPPQRLYNWARQIAAGMN 363
NIVK V +V E+ L+ LK + +P + ++ Q+ G+
Sbjct: 65 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIRN 422
+ HS +++HRDLK N+LI ++ K++DFG R + W APE++
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 179
Query: 423 -EQCSDKIDIWSYGIVLWELLT 443
+ S +DIWS G + E++T
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 99/202 (49%), Gaps = 24/202 (11%)
Query: 261 ESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQKETD---------IRHLRKLNHP 309
E+ ++ +G G G V+ KL E+VA+KK+R ET+ I L++LNHP
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE------VPPQRLYNWARQIAAGMN 363
NIVK V +V E+ L+ LK + +P + ++ Q+ G+
Sbjct: 66 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIRN 422
+ HS +++HRDLK N+LI ++ K++DFG R + W APE++
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 180
Query: 423 -EQCSDKIDIWSYGIVLWELLT 443
+ S +DIWS G + E++T
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 99/202 (49%), Gaps = 24/202 (11%)
Query: 261 ESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQKETD---------IRHLRKLNHP 309
E+ ++ +G G G V+ KL E+VA+KK+R ET+ I L++LNHP
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE------VPPQRLYNWARQIAAGMN 363
NIVK V +V E+ L+ LK + +P + ++ Q+ G+
Sbjct: 65 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIRN 422
+ HS +++HRDLK N+LI ++ K++DFG R + W APE++
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 179
Query: 423 -EQCSDKIDIWSYGIVLWELLT 443
+ S +DIWS G + E++T
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 97/198 (48%), Gaps = 16/198 (8%)
Query: 261 ESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQKETD---------IRHLRKLNHP 309
E+ ++ +G G G V+ KL E+VA+KK+R ET+ I L++LNHP
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGE--EVPPQRLYNWARQIAAGMNYLHS 367
NIVK V +V E+ + L + +P + ++ Q+ G+ + HS
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLSMD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 368 KQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIRN-EQC 425
+++HRDLK N+LI ++ K++DFG R + W APE++ +
Sbjct: 125 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 426 SDKIDIWSYGIVLWELLT 443
S +DIWS G + E++T
Sbjct: 185 STAVDIWSLGCIFAEMVT 202
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 97/198 (48%), Gaps = 16/198 (8%)
Query: 261 ESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQKETD---------IRHLRKLNHP 309
E+ ++ +G G G V+ KL E+VA+KK+R ET+ I L++LNHP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGE--EVPPQRLYNWARQIAAGMNYLHS 367
NIVK V +V E+ + L + +P + ++ Q+ G+ + HS
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLSMD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 368 KQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIRN-EQC 425
+++HRDLK N+LI ++ K++DFG R + W APE++ +
Sbjct: 123 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 182
Query: 426 SDKIDIWSYGIVLWELLT 443
S +DIWS G + E++T
Sbjct: 183 STAVDIWSLGCIFAEMVT 200
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 112/229 (48%), Gaps = 18/229 (7%)
Query: 239 SLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQK 296
SL+ + G +K V + WE+P +S +GSGA G+V S K E VA+KK+
Sbjct: 21 SLIRKKGFYKQDVNKTAWELPKTYVSPTH-VGSGAYGSVCSAIDKRSGEKVAIKKLSRPF 79
Query: 297 ETDIRH---------LRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLY--NLLKD-GE 344
+++I L+ + H N++ V T A ++ P +L K G
Sbjct: 80 QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGM 139
Query: 345 EVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKST 404
E +++ Q+ G+ Y+HS ++HRDLK N+ + E KI DFG R + + T
Sbjct: 140 EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMT 199
Query: 405 KMSFAGTVAWMAPEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
+ T + APEVI + + +DIWS G ++ E+LT +T +K D
Sbjct: 200 --GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD 246
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 99/202 (49%), Gaps = 24/202 (11%)
Query: 261 ESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQKETD---------IRHLRKLNHP 309
E+ ++ +G G G V+ KL E+VA+KK+R ET+ I L++LNHP
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE------VPPQRLYNWARQIAAGMN 363
NIVK V +V E+ L+ LK + +P + ++ Q+ G+
Sbjct: 66 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIRN 422
+ HS +++HRDLK N+LI ++ K++DFG R + W APE++
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 180
Query: 423 -EQCSDKIDIWSYGIVLWELLT 443
+ S +DIWS G + E++T
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 99/202 (49%), Gaps = 24/202 (11%)
Query: 261 ESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQKETD---------IRHLRKLNHP 309
E+ ++ +G G G V+ KL E+VA+KK+R ET+ I L++LNHP
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE------VPPQRLYNWARQIAAGMN 363
NIVK V +V E+ L+ LK + +P + ++ Q+ G+
Sbjct: 67 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 121
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIRN 422
+ HS +++HRDLK N+LI ++ K++DFG R + W APE++
Sbjct: 122 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 181
Query: 423 -EQCSDKIDIWSYGIVLWELLT 443
+ S +DIWS G + E++T
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMVT 203
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 109/229 (47%), Gaps = 12/229 (5%)
Query: 284 SEIVAVKKV----REQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNL 339
++I+ KK+ ++ E + R R L H NIV+ ++ + +V + G L+
Sbjct: 34 AKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFED 93
Query: 340 LKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSK---EEAKISDFGTC 396
+ E + +QI + + H ++HRDLK N+L+ SK K++DFG
Sbjct: 94 IVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA 153
Query: 397 RE-WNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVDSSA 455
E ++ FAGT +++PEV+R E +DIW+ G++L+ LL P+ D D
Sbjct: 154 IEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHK 213
Query: 456 IIWGVGSSSLHLPIP---STCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
+ + + + P P + P+ L+ +M N P+ R + + L H
Sbjct: 214 LYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTIN-PAKRITAHEALKH 261
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 177 VLIGSK---EEAKISDFGTCRE-WNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ SK K++DFG E ++ FAGT +++PEV+R E +DIW
Sbjct: 134 LLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIW 190
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 127/284 (44%), Gaps = 45/284 (15%)
Query: 261 ESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQKETD---------IRHLRKLNHP 309
E+ ++ +G G G V+ KL E+VA+KK+R ET+ I L++LNHP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGE--EVPPQRLYNWARQIAAGMNYLHS 367
NIVK V +V E+ + L + +P + ++ Q+ G+ + HS
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 368 KQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIRN-EQC 425
+++HRDLK N+LI ++ K++DFG R + + W APE++ +
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 426 SDKIDIWSYGIVLWELLTCETPY---KDVDS-----------SAIIW-GVGSSSLHLP-- 468
S +DIWS G + E++T + ++D ++W GV S + P
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 240
Query: 469 -----------IPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
+P DG LL +M + P+ R S K L+H
Sbjct: 241 PKWARQDFSKVVPPLDEDGRSLLSQMLHYD-PNKRISAKAALAH 283
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 92/183 (50%), Gaps = 5/183 (2%)
Query: 271 SGAQ-GAVFSGKLRSEIVAVKKVREQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVME 329
+G Q A F K R++ RE E ++ L+++ HPN++ V ++ E
Sbjct: 35 TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGE 94
Query: 330 YCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGS----K 385
A G L++ L + E + + + +QI G+ YLHS QI H DLK N+++ K
Sbjct: 95 LVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK 154
Query: 386 EEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCE 445
KI DFG + + + + GT ++APE++ E + D+WS G++ + LL+
Sbjct: 155 PRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 214
Query: 446 TPY 448
+P+
Sbjct: 215 SPF 217
Score = 28.9 bits (63), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 24/48 (50%)
Query: 182 KEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
K KI DFG + + + + GT ++APE++ E + D+W
Sbjct: 154 KPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMW 201
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 12/227 (5%)
Query: 286 IVAVKKV----REQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLK 341
I+ KK+ ++ E + R R L HPNIV+ ++ + ++ + G L+ +
Sbjct: 43 IINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIV 102
Query: 342 DGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSK---EEAKISDFGTCRE 398
E + +QI + + H ++HR+LK N+L+ SK K++DFG E
Sbjct: 103 AREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIE 162
Query: 399 WNNKSTK-MSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVDSSAII 457
+ FAGT +++PEV+R + +D+W+ G++L+ LL P+ D D +
Sbjct: 163 VEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLY 222
Query: 458 WGVGSSSLHLPIP---STCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
+ + + P P + P+ L+ KM N PS R + + L H
Sbjct: 223 QQIKAGAYDFPSPEWDTVTPEAKDLINKMLTIN-PSKRITAAEALKH 268
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 177 VLIGSK---EEAKISDFGTCREWNNKSTK-MSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ SK K++DFG E + FAGT +++PEV+R + +D+W
Sbjct: 141 LLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLW 197
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 24/202 (11%)
Query: 261 ESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQKETD---------IRHLRKLNHP 309
E+ ++ +G G G V+ KL E+VA+ K+R ET+ I L++LNHP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE------VPPQRLYNWARQIAAGMN 363
NIVK V +V E+ L+ LK + +P + ++ Q+ G+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIRN 422
+ HS +++HRDLK N+LI ++ K++DFG R + + W APE++
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 423 -EQCSDKIDIWSYGIVLWELLT 443
+ S +DIWS G + E++T
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 24/202 (11%)
Query: 261 ESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQKETD---------IRHLRKLNHP 309
E+ ++ +G G G V+ KL E+VA+ K+R ET+ I L++LNHP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE------VPPQRLYNWARQIAAGMN 363
NIVK V +V E+ L+ LK + +P + ++ Q+ G+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIRN 422
+ HS +++HRDLK N+LI ++ K++DFG R + + W APE++
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 176
Query: 423 -EQCSDKIDIWSYGIVLWELLT 443
+ S +DIWS G + E++T
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 110/227 (48%), Gaps = 21/227 (9%)
Query: 243 RIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAV---FSGKLRSEIVAVKKVREQKET- 298
R G ++ + + WE+P + + L+ +GSGA G+V + +LR + VAVKK+ ++
Sbjct: 11 RAGFYRQELNKTVWEVP-QRLQGLRPVGSGAYGSVCSAYDARLRQK-VAVKKLSRPFQSL 68
Query: 299 --------DIRHLRKLNHPNIVKFKGVCTQAPCYC----IVMEYCAYGPLYNLLKDGEEV 346
++R L+ L H N++ V T A + + G N + + +
Sbjct: 69 IHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQAL 128
Query: 347 PPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKM 406
+ + Q+ G+ Y+HS IIHRDLK NV + E +I DFG R+ + + T
Sbjct: 129 SDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMT-- 186
Query: 407 SFAGTVAWMAPEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
+ T + APE++ N + +DIWS G ++ ELL + + D
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSD 233
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 16/199 (8%)
Query: 266 LQWLGSGAQGAVFSGKLR--SEIVAVKKVR-------EQKETDIRHLRKL----NHPNIV 312
++ LG G+ G V +++ ++ AVK ++ + E + R L NHP +
Sbjct: 28 IRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLT 87
Query: 313 KFKGVCTQAPC-YCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQII 371
+ C Q P VME+ G L ++ R +A +I + + +LH K II
Sbjct: 88 QLF-CCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGII 146
Query: 372 HRDLKSPNVLIGSKEEAKISDFGTCREW-NNKSTKMSFAGTVAWMAPEVIRNEQCSDKID 430
+RDLK NVL+ + K++DFG C+E N T +F GT ++APE+++ +D
Sbjct: 147 YRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVD 206
Query: 431 IWSYGIVLWELLTCETPYK 449
W+ G++L+E+L P++
Sbjct: 207 WWAMGVLLYEMLCGHAPFE 225
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 177 VLIGSKEEAKISDFGTCREW-NNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNRLC 235
VL+ + K++DFG C+E N T +F GT ++APE+++ +D W L
Sbjct: 155 VLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLL 214
Query: 236 F 236
+
Sbjct: 215 Y 215
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 110/234 (47%), Gaps = 33/234 (14%)
Query: 242 ARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSG----------------KLRSE 285
AR G ++ V + WE+ DLQ +GSGA GAV S +SE
Sbjct: 7 ARSGFYRQEVTKTAWEVR-AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSE 65
Query: 286 IVAVKKVREQKETDIRHLRKLNHPNIVKFKGVCTQAPC------YCIVMEYCAYGPLYNL 339
+ A + RE +R L+ + H N++ V T + +VM + L L
Sbjct: 66 LFAKRAYRE-----LRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTD-LGKL 119
Query: 340 LKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREW 399
+K E++ R+ Q+ G+ Y+H+ IIHRDLK N+ + E KI DFG R+
Sbjct: 120 MKH-EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQA 178
Query: 400 NNKSTKMSFAGTVAWMAPEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
+ S T + APEVI N + + +DIWS G ++ E++T +T +K D
Sbjct: 179 D--SEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSD 230
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 18 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 73
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-XQKLTDDHVQFLIY 132
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T + T + A
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT--GYVATRWYRA 190
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 128/284 (45%), Gaps = 51/284 (17%)
Query: 260 FESISDLQWLGSGAQGAVFSGK--LRSEIVAVKKVREQKE------TDIRHLRKLNHPNI 311
FE I+ LG GA G V + L S A+KK+R +E +++ L LNH +
Sbjct: 8 FEEIA---VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYV 64
Query: 312 VKFKGV-------------CTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWA--R 356
V++ + I MEYC LY+L+ E + QR W R
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIH-SENLNQQRDEYWRLFR 123
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWN---------------N 401
QI ++Y+HS+ IIHRDLK N+ I KI DFG + + +
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 402 KSTKMSFAGTVAWMAPEVIRNE-QCSDKIDIWSYGIVLWELLTCETPYKD-VDSSAIIWG 459
S GT ++A EV+ ++KID++S GI+ +E++ P+ ++ I+
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTGMERVNILKK 240
Query: 460 VGSSSLHLPIPSTCPDGFQL---LMKMCWSNAPSSRPSFKQILS 500
+ S S+ P P + ++ ++++ + P+ RP + +L+
Sbjct: 241 LRSVSIEFP-PDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 112/229 (48%), Gaps = 18/229 (7%)
Query: 239 SLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQK 296
SL+ + G +K V + WE+P +S +GSGA G+V S K E VA+KK+
Sbjct: 3 SLIRKKGFYKQDVNKTAWELPKTYVSPTH-VGSGAYGSVCSAIDKRSGEKVAIKKLSRPF 61
Query: 297 ETDIRH---------LRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLY--NLLKD-GE 344
+++I L+ + H N++ V T A ++ P +L K G
Sbjct: 62 QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGL 121
Query: 345 EVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKST 404
+ +++ Q+ G+ Y+HS ++HRDLK N+ + E KI DFG R + + T
Sbjct: 122 KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMT 181
Query: 405 KMSFAGTVAWMAPEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
+ T + APEVI + + +DIWS G ++ E+LT +T +K D
Sbjct: 182 --GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD 228
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 100/200 (50%), Gaps = 11/200 (5%)
Query: 259 PFESISDLQWLGSGAQGAVFSGKLRS--EIVAVKKV-------REQKETDIRHLRKLNHP 309
P + + +G G+ G V +RS ++VAVKK+ RE ++ +R H
Sbjct: 18 PRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHE 77
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQ 369
N+V+ +VME+ G L +++ + +++ + ++ LH++
Sbjct: 78 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQG 136
Query: 370 IIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMS-FAGTVAWMAPEVIRNEQCSDK 428
+IHRD+KS ++L+ K+SDFG C + + + + GT WMAPE+I +
Sbjct: 137 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 196
Query: 429 IDIWSYGIVLWELLTCETPY 448
+DIWS GI++ E++ E PY
Sbjct: 197 VDIWSLGIMVIEMVDGEPPY 216
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMS-FAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ K+SDFG C + + + + GT WMAPE+I ++DIW
Sbjct: 147 ILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIW 200
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 20/226 (8%)
Query: 289 VKKVREQKETDIRHLRKLNHPNIVKF----KGVCTQAPCYCIVMEYCAYGPLYNLLKDGE 344
K R++ + + L+ L HPNIV+F + C +V E G L LK +
Sbjct: 65 TKSERQRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFK 124
Query: 345 EVPPQRLYNWARQIAAGMNYLHSKQ--IIHRDLKSPNVLI-GSKEEAKISDFGTCREWNN 401
+ L +W RQI G+ +LH++ IIHRDLK N+ I G KI D G
Sbjct: 125 VXKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA-TLKR 183
Query: 402 KSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVDSSAIIW--- 458
S + GT + APE E+ + +D++++G E T E PY + ++A I+
Sbjct: 184 ASFAKAVIGTPEFXAPEXY-EEKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRV 242
Query: 459 --GVGSSSL-HLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
GV +S + IP + +++ C R S K +L+H
Sbjct: 243 TSGVKPASFDKVAIPEV-----KEIIEGCIRQNKDERYSIKDLLNH 283
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 100/200 (50%), Gaps = 11/200 (5%)
Query: 259 PFESISDLQWLGSGAQGAVFSGKLRS--EIVAVKKV-------REQKETDIRHLRKLNHP 309
P + + +G G+ G V +RS ++VAVKK+ RE ++ +R H
Sbjct: 22 PRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHE 81
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQ 369
N+V+ +VME+ G L +++ + +++ + ++ LH++
Sbjct: 82 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQG 140
Query: 370 IIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMS-FAGTVAWMAPEVIRNEQCSDK 428
+IHRD+KS ++L+ K+SDFG C + + + + GT WMAPE+I +
Sbjct: 141 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 200
Query: 429 IDIWSYGIVLWELLTCETPY 448
+DIWS GI++ E++ E PY
Sbjct: 201 VDIWSLGIMVIEMVDGEPPY 220
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMS-FAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ K+SDFG C + + + + GT WMAPE+I ++DIW
Sbjct: 151 ILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIW 204
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 100/200 (50%), Gaps = 11/200 (5%)
Query: 259 PFESISDLQWLGSGAQGAVFSGKLRS--EIVAVKKV-------REQKETDIRHLRKLNHP 309
P + + +G G+ G V +RS ++VAVKK+ RE ++ +R H
Sbjct: 27 PRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHE 86
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQ 369
N+V+ +VME+ G L +++ + +++ + ++ LH++
Sbjct: 87 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQG 145
Query: 370 IIHRDLKSPNVLIGSKEEAKISDFGTCREWNNK-STKMSFAGTVAWMAPEVIRNEQCSDK 428
+IHRD+KS ++L+ K+SDFG C + + + + GT WMAPE+I +
Sbjct: 146 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 205
Query: 429 IDIWSYGIVLWELLTCETPY 448
+DIWS GI++ E++ E PY
Sbjct: 206 VDIWSLGIMVIEMVDGEPPY 225
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 177 VLIGSKEEAKISDFGTCREWNNK-STKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ K+SDFG C + + + + GT WMAPE+I ++DIW
Sbjct: 156 ILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIW 209
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 100/200 (50%), Gaps = 11/200 (5%)
Query: 259 PFESISDLQWLGSGAQGAVFSGKLRS--EIVAVKKV-------REQKETDIRHLRKLNHP 309
P + + +G G+ G V +RS ++VAVKK+ RE ++ +R H
Sbjct: 29 PRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHE 88
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQ 369
N+V+ +VME+ G L +++ + +++ + ++ LH++
Sbjct: 89 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQG 147
Query: 370 IIHRDLKSPNVLIGSKEEAKISDFGTCREWNNK-STKMSFAGTVAWMAPEVIRNEQCSDK 428
+IHRD+KS ++L+ K+SDFG C + + + + GT WMAPE+I +
Sbjct: 148 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 207
Query: 429 IDIWSYGIVLWELLTCETPY 448
+DIWS GI++ E++ E PY
Sbjct: 208 VDIWSLGIMVIEMVDGEPPY 227
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 177 VLIGSKEEAKISDFGTCREWNNK-STKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ K+SDFG C + + + + GT WMAPE+I ++DIW
Sbjct: 158 ILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIW 211
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 110/227 (48%), Gaps = 21/227 (9%)
Query: 243 RIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAV---FSGKLRSEIVAVKKVREQKET- 298
R G ++ + + WE+P + + L+ +GSGA G+V + +LR + VAVKK+ ++
Sbjct: 11 RAGFYRQELNKTVWEVP-QRLQGLRPVGSGAYGSVCSAYDARLRQK-VAVKKLSRPFQSL 68
Query: 299 --------DIRHLRKLNHPNIVKFKGVCTQAPCYC----IVMEYCAYGPLYNLLKDGEEV 346
++R L+ L H N++ V T A + + G N + + +
Sbjct: 69 IHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQAL 128
Query: 347 PPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKM 406
+ + Q+ G+ Y+HS IIHRDLK NV + E +I DFG R+ + + T
Sbjct: 129 SDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMT-- 186
Query: 407 SFAGTVAWMAPEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
+ T + APE++ N + +DIWS G ++ ELL + + D
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSD 233
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 24 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 79
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 80 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIY 138
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T + T + A
Sbjct: 139 QILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMT--GYVATRWYRA 196
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 233
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 102/205 (49%), Gaps = 28/205 (13%)
Query: 269 LGSGAQGAVFS--GKLRSEIVAVKKVREQKE--------TDIRHLRKLNHPNIVKFK--- 315
LG+G G V + E VA+K+ R++ +I+ ++KLNHPN+V +
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 316 -GVCTQAP--CYCIVMEYCAYGPLYNLLKDGE------EVPPQRLYNWARQIAAGMNYLH 366
G+ AP + MEYC G L L E E P + L + I++ + YLH
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS---DISSALRYLH 139
Query: 367 SKQIIHRDLKSPNVLIGSKEEA---KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNE 423
+IIHRDLK N+++ + KI D G +E + F GT+ ++APE++ +
Sbjct: 140 ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQK 199
Query: 424 QCSDKIDIWSYGIVLWELLTCETPY 448
+ + +D WS+G + +E +T P+
Sbjct: 200 KYTVTVDYWSFGTLAFECITGFRPF 224
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 186 KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNRLCF 236
KI D G +E + F GT+ ++APE++ ++ + +D W L F
Sbjct: 165 KIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAF 215
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 102/205 (49%), Gaps = 28/205 (13%)
Query: 269 LGSGAQGAVFS--GKLRSEIVAVKKVREQKE--------TDIRHLRKLNHPNIVKFK--- 315
LG+G G V + E VA+K+ R++ +I+ ++KLNHPN+V +
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 316 -GVCTQAP--CYCIVMEYCAYGPLYNLLKDGE------EVPPQRLYNWARQIAAGMNYLH 366
G+ AP + MEYC G L L E E P + L + I++ + YLH
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS---DISSALRYLH 138
Query: 367 SKQIIHRDLKSPNVLIGSKEEA---KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNE 423
+IIHRDLK N+++ + KI D G +E + F GT+ ++APE++ +
Sbjct: 139 ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQK 198
Query: 424 QCSDKIDIWSYGIVLWELLTCETPY 448
+ + +D WS+G + +E +T P+
Sbjct: 199 KYTVTVDYWSFGTLAFECITGFRPF 223
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 186 KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNRLCF 236
KI D G +E + F GT+ ++APE++ ++ + +D W L F
Sbjct: 164 KIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAF 214
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 20 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 75
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 76 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIY 134
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T + T + A
Sbjct: 135 QILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMT--GYVATRWYRA 192
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 229
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 96/198 (48%), Gaps = 16/198 (8%)
Query: 261 ESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQKETD---------IRHLRKLNHP 309
E+ ++ +G G G V+ KL E+VA+KK+R ET+ I L++LNHP
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGE--EVPPQRLYNWARQIAAGMNYLHS 367
NIVK V +V E+ L + +P + ++ Q+ G+ + HS
Sbjct: 66 NIVKLLDVIHTENKLYLVFEHVDQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 368 KQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIRN-EQC 425
+++HRDLK N+LI ++ K++DFG R + W APE++ +
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 426 SDKIDIWSYGIVLWELLT 443
S +DIWS G + E++T
Sbjct: 185 STAVDIWSLGCIFAEMVT 202
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 23 WEVP-ERYQNLSPIGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 78
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 79 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIY 137
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T + T + A
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT--GYVATRWYRA 195
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 232
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 113/257 (43%), Gaps = 15/257 (5%)
Query: 269 LGSGAQGAVF------SGKLRSEIVAVKKVREQKETDIRH----LRKLNHPNIVKFKGVC 318
LG+GA V +GKL + KK + KE+ I + LRK+ H NIV + +
Sbjct: 30 LGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIY 89
Query: 319 TQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSP 378
+VM+ + G L++ + + + RQ+ + YLH I+HRDLK
Sbjct: 90 ESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPE 149
Query: 379 NVLIGSKEEAK---ISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYG 435
N+L S++E ISDFG + + GT ++APEV+ + S +D WS G
Sbjct: 150 NLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIG 209
Query: 436 IVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIP--STCPDGFQLLMKMCWSNAPSSRP 493
++ + LL P+ D + S + + + P D + ++ P+ R
Sbjct: 210 VIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNKRY 269
Query: 494 SFKQILSHLDIASQEVL 510
+ +Q H IA L
Sbjct: 270 TCEQAARHPWIAGDTAL 286
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 183 EEAKI--SDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
EE+KI SDFG + + GT ++APEV+ + S +D W
Sbjct: 158 EESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCW 206
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 94/192 (48%), Gaps = 10/192 (5%)
Query: 269 LGSGAQGAVFSGKLRS-----EIVAVKKVREQK--ETDIRHLRKLNHPNIVKFKGVCTQA 321
LG GA V+ K + + +KK ++K T+I L +L+HPNI+K K +
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETP 120
Query: 322 PCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVL 381
+V+E G L++ + + + + +QI + YLH I+HRDLK N+L
Sbjct: 121 TEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLL 180
Query: 382 IGS---KEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVL 438
+ KI+DFG + ++ + GT + APE++R ++D+WS GI+
Sbjct: 181 YATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIIT 240
Query: 439 WELLTCETPYKD 450
+ LL P+ D
Sbjct: 241 YILLCGFEPFYD 252
Score = 32.0 bits (71), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 186 KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
KI+DFG + ++ + GT + APE++R ++D+W
Sbjct: 191 KIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMW 234
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 29 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 84
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 85 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIY 143
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T + T + A
Sbjct: 144 QILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT--GYVATRWYRA 201
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 238
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 100/200 (50%), Gaps = 11/200 (5%)
Query: 259 PFESISDLQWLGSGAQGAVFSGKLRS--EIVAVKKV-------REQKETDIRHLRKLNHP 309
P + + +G G+ G V +RS ++VAVKK+ RE ++ +R H
Sbjct: 72 PRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHE 131
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQ 369
N+V+ +VME+ G L +++ + +++ + ++ LH++
Sbjct: 132 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQG 190
Query: 370 IIHRDLKSPNVLIGSKEEAKISDFGTCREWNNK-STKMSFAGTVAWMAPEVIRNEQCSDK 428
+IHRD+KS ++L+ K+SDFG C + + + + GT WMAPE+I +
Sbjct: 191 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 250
Query: 429 IDIWSYGIVLWELLTCETPY 448
+DIWS GI++ E++ E PY
Sbjct: 251 VDIWSLGIMVIEMVDGEPPY 270
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 177 VLIGSKEEAKISDFGTCREWNNK-STKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ K+SDFG C + + + + GT WMAPE+I ++DIW
Sbjct: 201 ILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIW 254
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 23 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 78
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 79 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIY 137
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T + T + A
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT--GYVATRWYRA 195
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 232
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 141/324 (43%), Gaps = 62/324 (19%)
Query: 263 ISDLQWLGSGAQGAVFSGKLR--SEIVAVK---KVREQKETDIRH-----LRKLNHPNIV 312
+SD+ LG GA VF G+ + ++ A+K + + D++ L+KLNH NIV
Sbjct: 13 LSDI--LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIV 70
Query: 313 KFKGVC--TQAPCYCIVMEYCAYGPLYNLLK---DGEEVPPQRLYNWARQIAAGMNYLHS 367
K + T ++ME+C G LY +L+ + +P R + GMN+L
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE 130
Query: 368 KQIIHRDLKSPNVL--IGSKEEA--KISDFGTCREWNNKSTKMSFAGTVAWMAPE----- 418
I+HR++K N++ IG ++ K++DFG RE + +S GT ++ P+
Sbjct: 131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERA 190
Query: 419 VIRNE---QCSDKIDIWSYGIVLWELLTCETPYKDVDS----------------SAIIWG 459
V+R + + +D+WS G+ + T P++ + S I G
Sbjct: 191 VLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISG 250
Query: 460 VGSS-------SLHLPIPSTCPDGFQLLMKMCWSNAPSSRP----SFKQILSHL-DIASQ 507
V + S +P+ + G Q+L+ +N + F Q + DI +
Sbjct: 251 VQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310
Query: 508 EVLRIQPEPYYKMQMIWKEEIRVH 531
V+ + + +Q + +I +H
Sbjct: 311 MVIHV-----FSLQQMTAHKIYIH 329
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 15/217 (6%)
Query: 298 TDIRHLRKLNHPNIVKFKGVC---TQAPCYCIVMEYCAYGPLYNLLKDGEE----VPPQR 350
+++ LR+L HPNIV++ T Y IVMEYC G L +++ G + + +
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLY-IVMEYCEGGDLASVITKGTKERQYLDEEF 112
Query: 351 LYNWARQIAAGMNYLHSKQ-----IIHRDLKSPNVLIGSKEEAKISDFGTCREWN-NKST 404
+ Q+ + H + ++HRDLK NV + K+ K+ DFG R N + S
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSF 172
Query: 405 KMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSS 464
+F GT +M+PE + ++K DIWS G +L+EL P+ + +
Sbjct: 173 AKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK 232
Query: 465 LHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
IP D ++ + RPS ++IL +
Sbjct: 233 FR-RIPYRYSDELNEIITRMLNLKDYHRPSVEEILEN 268
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Query: 177 VLIGSKEEAKISDFGTCREWN-NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNRLC 235
V + K+ K+ DFG R N + S +F GT +M+PE + ++K DIW C
Sbjct: 147 VFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLG--C 204
Query: 236 FPTSLMARIGEFKSF 250
L A + F +F
Sbjct: 205 LLYELCALMPPFTAF 219
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 15/217 (6%)
Query: 298 TDIRHLRKLNHPNIVKFKGVC---TQAPCYCIVMEYCAYGPLYNLLKDGEE----VPPQR 350
+++ LR+L HPNIV++ T Y IVMEYC G L +++ G + + +
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLY-IVMEYCEGGDLASVITKGTKERQYLDEEF 112
Query: 351 LYNWARQIAAGMNYLHSKQ-----IIHRDLKSPNVLIGSKEEAKISDFGTCREWN-NKST 404
+ Q+ + H + ++HRDLK NV + K+ K+ DFG R N + S
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSF 172
Query: 405 KMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSS 464
+F GT +M+PE + ++K DIWS G +L+EL P+ + +
Sbjct: 173 AKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK 232
Query: 465 LHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
IP D ++ + RPS ++IL +
Sbjct: 233 FR-RIPYRYSDELNEIITRMLNLKDYHRPSVEEILEN 268
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Query: 177 VLIGSKEEAKISDFGTCREWN-NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNRLC 235
V + K+ K+ DFG R N + S +F GT +M+PE + ++K DIW C
Sbjct: 147 VFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLG--C 204
Query: 236 FPTSLMARIGEFKSF 250
L A + F +F
Sbjct: 205 LLYELCALMPPFTAF 219
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 104/222 (46%), Gaps = 23/222 (10%)
Query: 294 EQKETDIRHLRKLNHPNIVKFKGVC---TQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQR 350
EQ +I L+KL+HPN+VK V + Y +V E GP+ EVP +
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLY-MVFELVNQGPVM-------EVPTLK 132
Query: 351 LYN------WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKST 404
+ + + + G+ YLH ++IIHRD+K N+L+G KI+DFG E+
Sbjct: 133 PLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA 192
Query: 405 KMS-FAGTVAWMAPEVI---RNEQCSDKIDIWSYGIVLWELLTCETPYKDVDSSAIIWGV 460
+S GT A+MAPE + R +D+W+ G+ L+ + + P+ D + +
Sbjct: 193 LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKI 252
Query: 461 GSSSLHLPI-PSTCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
S +L P P D L+ +M N P SR +I H
Sbjct: 253 KSQALEFPDQPDIAEDLKDLITRMLDKN-PESRIVVPEIKLH 293
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMS-FAGTVAWMAPEVI---RNEQCSDKIDIW 229
+L+G KI+DFG E+ +S GT A+MAPE + R +D+W
Sbjct: 168 LLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVW 224
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 101/200 (50%), Gaps = 11/200 (5%)
Query: 259 PFESISDLQWLGSGAQGAVFSGKLRS--EIVAVKKVREQKE-------TDIRHLRKLNHP 309
P + + +G G+ G V +RS ++VAVKK+ +K+ ++ +R H
Sbjct: 149 PRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHE 208
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQ 369
N+V+ +VME+ G L +++ + +++ + ++ LH++
Sbjct: 209 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQG 267
Query: 370 IIHRDLKSPNVLIGSKEEAKISDFGTCREWNNK-STKMSFAGTVAWMAPEVIRNEQCSDK 428
+IHRD+KS ++L+ K+SDFG C + + + + GT WMAPE+I +
Sbjct: 268 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 327
Query: 429 IDIWSYGIVLWELLTCETPY 448
+DIWS GI++ E++ E PY
Sbjct: 328 VDIWSLGIMVIEMVDGEPPY 347
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 177 VLIGSKEEAKISDFGTCREWNNK-STKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ K+SDFG C + + + + GT WMAPE+I ++DIW
Sbjct: 278 ILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIW 331
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 125/295 (42%), Gaps = 23/295 (7%)
Query: 256 WEIPFESISDLQWLGSGAQGAVFSGKLR--SEIVAVKKVRE--QKETDIRHLRKLNH--- 308
++ + +L +GSG G V+ + R ++AVK++R KE + R L L+
Sbjct: 20 YQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLK 79
Query: 309 ----PNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVP-PQR-LYNWARQIAAGM 362
P IV+ G I ME G LK + P P+R L I +
Sbjct: 80 SHDCPYIVQCFGTFITNTDVFIAMEL--MGTCAEKLKKRMQGPIPERILGKMTVAIVKAL 137
Query: 363 NYLHSKQ-IIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIR 421
YL K +IHRD+K N+L+ + + K+ DFG + K AG A+MAPE I
Sbjct: 138 YYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERID 197
Query: 422 NEQCSD-----KIDIWSYGIVLWELLTCETPYKD--VDSSAIIWGVGSSSLHLPIPSTCP 474
+ + D+WS GI L EL T + PYK+ D + + LP
Sbjct: 198 PPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFS 257
Query: 475 DGFQLLMKMCWSNAPSSRPSFKQILSHLDIASQEVLRIQPEPYYKMQMIWKEEIR 529
FQ +K C + RP + ++L H I E L + ++K M E R
Sbjct: 258 GDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYETLEVDVASWFKDVMAKTESPR 312
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 18 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 73
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-XQKLTDDHVQFLIY 132
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T + T + A
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRWYRA 190
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 18 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 73
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIY 132
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T + T + A
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRWYRA 190
Query: 417 PEVIRNE-QCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 191 PEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 119/276 (43%), Gaps = 40/276 (14%)
Query: 256 WEIPFESISDLQWLGSGAQGAVFSGKLR----SEIVAVKKVR------EQK----ETDIR 301
+E+ + + + LG GA G V K+R +I+AVK++R EQK + DI
Sbjct: 46 FEVKADDLEPIMELGRGAYGVV--EKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDI- 102
Query: 302 HLRKLNHPNIVKFKGVCTQAPCYCIVMEY--CAYGPLYNLLKD-GEEVPPQRLYNWARQI 358
+R ++ P V F G + I ME + Y + D G+ +P L A I
Sbjct: 103 SMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSI 162
Query: 359 AAGMNYLHSK-QIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAP 417
+ +LHSK +IHRD+K NVLI + + K+ DFG + K AG +MAP
Sbjct: 163 VKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAP 222
Query: 418 EVIRNE----QCSDKIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHL----PI 469
E I E S K DIWS GI + EL PY DS WG L P
Sbjct: 223 ERINPELNQKGYSVKSDIWSLGITMIELAILRFPY---DS----WGTPFQQLKQVVEEPS 275
Query: 470 PSTCPDGFQL----LMKMCWSNAPSSRPSFKQILSH 501
P D F C RP++ +++ H
Sbjct: 276 PQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 23/215 (10%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGKLRSEIVAVKKVREQKET---------DIRHL 303
WE+P E +L +GSGA G+V F K VAVKK+ ++ ++R L
Sbjct: 24 WEVP-ERYQNLSPVGSGAYGSVCAAFDTK-TGHRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 304 RKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQI 358
+ + H N++ V T A ++ + L N++K +++ + QI
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQI 140
Query: 359 AAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPE 418
G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T + T + APE
Sbjct: 141 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRWYRAPE 198
Query: 419 VIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
++ N + +DIWS G ++ ELLT T + D
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 233
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ + ++ ++R
Sbjct: 30 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSKPFQSIIHAKRTYRELR 85
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 86 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIY 144
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T + T + A
Sbjct: 145 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRWYRA 202
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 239
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 82/180 (45%), Gaps = 18/180 (10%)
Query: 287 VAVKKVREQKETD----IRHLRK------LNHPNIVKFKGV----CTQAPCYCIVMEYCA 332
VAVK +R D +R R+ LNHP IV P IVMEY
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVD 99
Query: 333 YGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISD 392
L +++ + P+R +N+ H IIHRD+K N++I + K+ D
Sbjct: 100 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMD 159
Query: 393 FGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
FG R N+ + + GT +++PE R + + D++S G VL+E+LT E P+
Sbjct: 160 FGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 128/278 (46%), Gaps = 40/278 (14%)
Query: 256 WEIPFESISDLQWLGSGAQGAV--FSGKLRSEIVAVKKVR------EQK----ETDIRHL 303
W+ E + DL +G GA G+V K +I+AVK++R EQK + D+ +
Sbjct: 17 WDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVV-M 75
Query: 304 RKLNHPNIVKFKGVCTQAPCYCIVMEYCA------YGPLYNLLKDGEEVPPQRLYNWARQ 357
R + P IV+F G + I ME + Y +Y++L D +P + L
Sbjct: 76 RSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDD--VIPEEILGKITLA 133
Query: 358 IAAGMNYLHSK-QIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
+N+L +IIHRD+K N+L+ K+ DFG + + K AG +MA
Sbjct: 134 TVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMA 193
Query: 417 PEVI---RNEQCSD-KIDIWSYGIVLWELLTCETPYKDVDS-----SAIIWG----VGSS 463
PE I + Q D + D+WS GI L+EL T PY +S + ++ G + +S
Sbjct: 194 PERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNS 253
Query: 464 SLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
PS F + +C + S RP +K++L H
Sbjct: 254 EEREFSPS-----FINFVNLCLTKDESKRPKYKELLKH 286
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 23/215 (10%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGKLRSEIVAVKKVREQKET---------DIRHL 303
WE+P E +L +GSGA G+V F K VAVKK+ ++ ++R L
Sbjct: 18 WEVP-ERYQNLSPVGSGAYGSVCAAFDTK-TGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 304 RKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQI 358
+ + H N++ V T A ++ + L N++K +++ + QI
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQI 134
Query: 359 AAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPE 418
G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T + T + APE
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRWYRAPE 192
Query: 419 VIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
++ N + +DIWS G ++ ELLT T + D
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 110/227 (48%), Gaps = 21/227 (9%)
Query: 243 RIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAV---FSGKLRSEIVAVKKVREQKET- 298
R G ++ + + WE+P + + L+ +GSGA G+V + +LR + VAVKK+ ++
Sbjct: 3 RAGFYRQELNKTVWEVP-QRLQGLRPVGSGAYGSVCSAYDARLRQK-VAVKKLSRPFQSL 60
Query: 299 --------DIRHLRKLNHPNIVKFKGVCTQAPCYC----IVMEYCAYGPLYNLLKDGEEV 346
++R L+ L H N++ V T A + + G N + + +
Sbjct: 61 IHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQAL 120
Query: 347 PPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKM 406
+ + Q+ G+ Y+HS IIHRDLK NV + E +I DFG R+ + + T
Sbjct: 121 SDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMT-- 178
Query: 407 SFAGTVAWMAPEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
+ T + APE++ N + +DIWS G ++ ELL + + D
Sbjct: 179 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSD 225
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 112/257 (43%), Gaps = 15/257 (5%)
Query: 269 LGSGAQGAVF--SGKLRSEIVAVKKVREQK--------ETDIRHLRKLNHPNIVKFKGVC 318
LG+GA V K ++VA+K + ++ E +I L K+ HPNIV +
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 319 TQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSP 378
++M+ + G L++ + + + Q+ + YLH I+HRDLK
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPE 145
Query: 379 NVLIGSKEEAK---ISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYG 435
N+L S +E ISDFG + + S + GT ++APEV+ + S +D WS G
Sbjct: 146 NLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIG 205
Query: 436 IVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIP--STCPDGFQLLMKMCWSNAPSSRP 493
++ + LL P+ D + + + + + P D + ++ P R
Sbjct: 206 VIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRF 265
Query: 494 SFKQILSHLDIASQEVL 510
+ +Q L H IA L
Sbjct: 266 TCEQALQHPWIAGDTAL 282
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 187 ISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
ISDFG + + S + GT ++APEV+ + S +D W
Sbjct: 160 ISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCW 202
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 23/215 (10%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGKLRSEIVAVKKVREQKET---------DIRHL 303
WE+P E +L +GSGA G+V F K VAVKK+ ++ ++R L
Sbjct: 38 WEVP-ERYQNLSPVGSGAYGSVCAAFDTK-TGHRVAVKKLSRPFQSIIHAKRTYRELRLL 95
Query: 304 RKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQI 358
+ + H N++ V T A ++ + L N++K +++ + QI
Sbjct: 96 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQI 154
Query: 359 AAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPE 418
G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T + T + APE
Sbjct: 155 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRWYRAPE 212
Query: 419 VIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
++ N + +DIWS G ++ ELLT T + D
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 247
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 18 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 73
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIY 132
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T + T + A
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRWYRA 190
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 24 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 79
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 80 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIY 138
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T + T + A
Sbjct: 139 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRWYRA 196
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 233
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 24 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 79
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 80 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIY 138
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T + T + A
Sbjct: 139 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRWYRA 196
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 233
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 18 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 73
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIY 132
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T + T + A
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRWYRA 190
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 18 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 73
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIY 132
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T + T + A
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRWYRA 190
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 112/257 (43%), Gaps = 15/257 (5%)
Query: 269 LGSGAQGAVF--SGKLRSEIVAVKKVREQK--------ETDIRHLRKLNHPNIVKFKGVC 318
LG+GA V K ++VA+K + ++ E +I L K+ HPNIV +
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 319 TQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSP 378
++M+ + G L++ + + + Q+ + YLH I+HRDLK
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPE 145
Query: 379 NVLIGSKEEAK---ISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYG 435
N+L S +E ISDFG + + S + GT ++APEV+ + S +D WS G
Sbjct: 146 NLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIG 205
Query: 436 IVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIP--STCPDGFQLLMKMCWSNAPSSRP 493
++ + LL P+ D + + + + + P D + ++ P R
Sbjct: 206 VIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRF 265
Query: 494 SFKQILSHLDIASQEVL 510
+ +Q L H IA L
Sbjct: 266 TCEQALQHPWIAGDTAL 282
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 187 ISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
ISDFG + + S + GT ++APEV+ + S +D W
Sbjct: 160 ISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCW 202
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 23/215 (10%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGKLRSEIVAVKKVREQKET---------DIRHL 303
WE+P E +L +GSGA G+V F K VAVKK+ ++ ++R L
Sbjct: 37 WEVP-ERYQNLSPVGSGAYGSVCAAFDTK-TGHRVAVKKLSRPFQSIIHAKRTYRELRLL 94
Query: 304 RKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQI 358
+ + H N++ V T A ++ + L N++K +++ + QI
Sbjct: 95 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQI 153
Query: 359 AAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPE 418
G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T + T + APE
Sbjct: 154 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRWYRAPE 211
Query: 419 VIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
++ N + +DIWS G ++ ELLT T + D
Sbjct: 212 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 246
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 18 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 73
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIY 132
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T + T + A
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRWYRA 190
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 25 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 80
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 81 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIY 139
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T + T + A
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRWYRA 197
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 234
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 23 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 78
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 79 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIY 137
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T + T + A
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRWYRA 195
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 232
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 30 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 85
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 86 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIY 144
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T + T + A
Sbjct: 145 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRWYRA 202
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 239
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 23 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 78
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 79 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIY 137
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T + T + A
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRWYRA 195
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 232
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 17 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 72
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 73 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIY 131
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T + T + A
Sbjct: 132 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRWYRA 189
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 190 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 226
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 30 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 85
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 86 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIY 144
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T + T + A
Sbjct: 145 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRWYRA 202
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 239
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 23/215 (10%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGKLRSEIVAVKKVREQKET---------DIRHL 303
WE+P E +L +GSGA G+V F K VAVKK+ ++ ++R L
Sbjct: 28 WEVP-ERYQNLAPVGSGAYGSVCAAFDTK-TGHRVAVKKLSRPFQSIIHAKRTYRELRLL 85
Query: 304 RKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQI 358
+ + H N++ V T A ++ + L N++K +++ + QI
Sbjct: 86 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQI 144
Query: 359 AAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPE 418
G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T + T + APE
Sbjct: 145 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRWYRAPE 202
Query: 419 VIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
++ N + +DIWS G ++ ELLT T + D
Sbjct: 203 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 237
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 38 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 93
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 94 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIY 152
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T + T + A
Sbjct: 153 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRWYRA 210
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 247
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 41 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 96
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 97 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIY 155
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T + T + A
Sbjct: 156 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRWYRA 213
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 250
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 82/180 (45%), Gaps = 18/180 (10%)
Query: 287 VAVKKVREQKETD----IRHLRK------LNHPNIVKF----KGVCTQAPCYCIVMEYCA 332
VAVK +R D +R R+ LNHP IV + P IVMEY
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 333 YGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISD 392
L +++ + P+R +N+ H IIHRD+K N+LI + K+ D
Sbjct: 100 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVD 159
Query: 393 FGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
FG R N+ + GT +++PE R + + D++S G VL+E+LT E P+
Sbjct: 160 FGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 83/180 (46%), Gaps = 18/180 (10%)
Query: 287 VAVKKVREQKETD----IRHLRK------LNHPNIVKF----KGVCTQAPCYCIVMEYCA 332
VAVK +R D +R R+ LNHP IV + P IVMEY
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 333 YGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISD 392
L +++ + P+R +N+ H IIHRD+K N++I + K+ D
Sbjct: 100 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMD 159
Query: 393 FGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
FG R N+ + + GT +++PE R + + D++S G VL+E+LT E P+
Sbjct: 160 FGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 18 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 73
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIY 132
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T + T + A
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRWYRA 190
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 112/257 (43%), Gaps = 15/257 (5%)
Query: 269 LGSGAQGAVF--SGKLRSEIVAVKKVREQK--------ETDIRHLRKLNHPNIVKFKGVC 318
LG+GA V K ++VA+K + ++ E +I L K+ HPNIV +
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 319 TQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSP 378
++M+ + G L++ + + + Q+ + YLH I+HRDLK
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPE 145
Query: 379 NVLIGSKEEAK---ISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYG 435
N+L S +E ISDFG + + S + GT ++APEV+ + S +D WS G
Sbjct: 146 NLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIG 205
Query: 436 IVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIP--STCPDGFQLLMKMCWSNAPSSRP 493
++ + LL P+ D + + + + + P D + ++ P R
Sbjct: 206 VIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRF 265
Query: 494 SFKQILSHLDIASQEVL 510
+ +Q L H IA L
Sbjct: 266 TCEQALQHPWIAGDTAL 282
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 187 ISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
ISDFG + + S + GT ++APEV+ + S +D W
Sbjct: 160 ISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCW 202
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 83/180 (46%), Gaps = 18/180 (10%)
Query: 287 VAVKKVREQKETD----IRHLRK------LNHPNIVKF----KGVCTQAPCYCIVMEYCA 332
VAVK +R D +R R+ LNHP IV + P IVMEY
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 333 YGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISD 392
L +++ + P+R +N+ H IIHRD+K N++I + K+ D
Sbjct: 100 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMD 159
Query: 393 FGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
FG R N+ + + GT +++PE R + + D++S G VL+E+LT E P+
Sbjct: 160 FGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 103/215 (47%), Gaps = 23/215 (10%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGKLRSEIVAVKKVREQKET---------DIRHL 303
WE+P E +L +GSGA G+V F K VAVKK+ ++ ++R L
Sbjct: 18 WEVP-ERYQNLSPVGSGAYGSVCAAFDTK-TGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 304 RKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQI 358
+ + H N++ V T A ++ + L N++K +++ + QI
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQI 134
Query: 359 AAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPE 418
G+ Y+HS IIHRDLK N+ + E KI DFG R +++ F T + APE
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMA--GFVATRWYRAPE 192
Query: 419 VIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
++ N + +DIWS G ++ ELLT T + D
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 20 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 75
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 76 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIY 134
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T + T + A
Sbjct: 135 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRWYRA 192
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 229
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 103/215 (47%), Gaps = 23/215 (10%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGKLRSEIVAVKKVREQKET---------DIRHL 303
WE+P E +L +GSGA G+V F K VAVKK+ ++ ++R L
Sbjct: 18 WEVP-ERYQNLSPVGSGAYGSVCAAFDTK-TGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 304 RKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQI 358
+ + H N++ V T A ++ + L N++K +++ + QI
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQI 134
Query: 359 AAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPE 418
G+ Y+HS IIHRDLK N+ + E KI DFG R +++ F T + APE
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMA--GFVATRWYRAPE 192
Query: 419 VIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
++ N + +DIWS G ++ ELLT T + D
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 18 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 73
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIY 132
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T + T + A
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRWYRA 190
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 18 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 73
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIY 132
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T + T + A
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRWYRA 190
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 23/215 (10%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGKLRSEIVAVKKVREQKET---------DIRHL 303
WE+P E +L +GSGA G+V F K VAVKK+ ++ ++R L
Sbjct: 14 WEVP-ERYQNLSPVGSGAYGSVCAAFDTK-TGHRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 304 RKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQI 358
+ + H N++ V T A ++ + L N++K +++ + QI
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQI 130
Query: 359 AAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPE 418
G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T + T + APE
Sbjct: 131 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRWYRAPE 188
Query: 419 VIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
++ N + +DIWS G ++ ELLT T + D
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 223
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 20 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 75
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 76 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIY 134
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T + T + A
Sbjct: 135 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRWYRA 192
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 229
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 20 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 75
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 76 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIY 134
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T + T + A
Sbjct: 135 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRWYRA 192
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 229
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 37 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 92
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 93 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIY 151
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T + T + A
Sbjct: 152 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRWYRA 209
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 246
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 29 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 84
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 85 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIY 143
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T + T + A
Sbjct: 144 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRWYRA 201
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 238
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 83/180 (46%), Gaps = 18/180 (10%)
Query: 287 VAVKKVREQKETD----IRHLRK------LNHPNIVKF----KGVCTQAPCYCIVMEYCA 332
VAVK +R D +R R+ LNHP IV + P IVMEY
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 333 YGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISD 392
L +++ + P+R +N+ H IIHRD+K N++I + K+ D
Sbjct: 100 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMD 159
Query: 393 FGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
FG R N+ + + GT +++PE R + + D++S G VL+E+LT E P+
Sbjct: 160 FGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 33/226 (14%)
Query: 252 LRDEWEIPFES----ISDLQ----------WLGSGAQGAVFSGKLRSEIVAVKKVREQKE 297
L + +PFES + DL+ +G G G V+ G LR K R +
Sbjct: 16 LSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES 75
Query: 298 TD--------IRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQ 349
+ I L HP++V G C + ++ +Y G L L G ++P
Sbjct: 76 SQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLY-GSDLPTM 134
Query: 350 RLYNWARQI------AAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR---EWN 400
+ +W +++ A G++YLH++ IIHRD+KS N+L+ KI+DFG + E +
Sbjct: 135 SM-SWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELD 193
Query: 401 NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCET 446
GT+ ++ PE + ++K D++S+G+VL+E+L +
Sbjct: 194 QTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARS 239
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 15 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 70
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 71 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIY 129
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T + T + A
Sbjct: 130 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRWYRA 187
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 224
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 110/215 (51%), Gaps = 26/215 (12%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-EH 87
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV--PPQRLYN 353
+ R L+ +N P +VK + +VMEY A G +++ L+ P R Y
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY- 146
Query: 354 WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA 413
A QI YLHS +I+RDLK N+LI + +++DFG + ++ + AGT
Sbjct: 147 -AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--AGTPE 203
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
++APE+I ++ + +D W+ G++++E+ P+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 66/151 (43%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
+LI + +++DFG + ++ + AGT ++APE+I ++ + +D W Y
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWXL--AGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L++ +
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVN 289
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 290 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 320
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 106/214 (49%), Gaps = 21/214 (9%)
Query: 256 WEIPFESISDLQWLGSGAQGAVFSG-KLRSEI-VAVKKVREQKET---------DIRHLR 304
WE+P E L +GSGA G+V S ++S + +AVKK+ ++ ++R L+
Sbjct: 47 WEVP-ERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLK 105
Query: 305 KLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIA 359
+ H N++ V T A ++ + L N++K +++ + QI
Sbjct: 106 HMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQIL 164
Query: 360 AGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEV 419
G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T + T + APE+
Sbjct: 165 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRWYRAPEI 222
Query: 420 IRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
+ N + +DIWS G ++ ELLT T + D
Sbjct: 223 MLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTD 256
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 83/180 (46%), Gaps = 18/180 (10%)
Query: 287 VAVKKVREQKETD----IRHLRK------LNHPNIVKF----KGVCTQAPCYCIVMEYCA 332
VAVK +R D +R R+ LNHP IV + P IVMEY
Sbjct: 57 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 116
Query: 333 YGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISD 392
L +++ + P+R +N+ H IIHRD+K N++I + K+ D
Sbjct: 117 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMD 176
Query: 393 FGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
FG R N+ + + GT +++PE R + + D++S G VL+E+LT E P+
Sbjct: 177 FGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 236
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 15/217 (6%)
Query: 298 TDIRHLRKLNHPNIVKFKGVC---TQAPCYCIVMEYCAYGPLYNLLKDGEE----VPPQR 350
+++ LR+L HPNIV++ T Y IVMEYC G L +++ G + + +
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLY-IVMEYCEGGDLASVITKGTKERQYLDEEF 112
Query: 351 LYNWARQIAAGMNYLHSKQ-----IIHRDLKSPNVLIGSKEEAKISDFGTCREWN-NKST 404
+ Q+ + H + ++HRDLK NV + K+ K+ DFG R N ++
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDF 172
Query: 405 KMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSS 464
F GT +M+PE + ++K DIWS G +L+EL P+ + +
Sbjct: 173 AKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK 232
Query: 465 LHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
IP D ++ + RPS ++IL +
Sbjct: 233 FR-RIPYRYSDELNEIITRMLNLKDYHRPSVEEILEN 268
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 177 VLIGSKEEAKISDFGTCREWN-NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNRLC 235
V + K+ K+ DFG R N ++ F GT +M+PE + ++K DIW C
Sbjct: 147 VFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLG--C 204
Query: 236 FPTSLMARIGEFKSF 250
L A + F +F
Sbjct: 205 LLYELCALMPPFTAF 219
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 15/257 (5%)
Query: 269 LGSGAQGAVF--SGKLRSEIVAVK----KVREQKE----TDIRHLRKLNHPNIVKFKGVC 318
LG+GA V K ++VA+K K E KE +I L K+ HPNIV +
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 319 TQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSP 378
++M+ + G L++ + + + Q+ + YLH I+HRDLK
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPE 145
Query: 379 NVLIGSKEEAK---ISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYG 435
N+L S +E ISDFG + + S + GT ++APEV+ + S +D WS G
Sbjct: 146 NLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIG 205
Query: 436 IVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIP--STCPDGFQLLMKMCWSNAPSSRP 493
++ + LL P+ D + + + + + P D + ++ P R
Sbjct: 206 VIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRF 265
Query: 494 SFKQILSHLDIASQEVL 510
+ +Q L H IA L
Sbjct: 266 TCEQALQHPWIAGDTAL 282
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 187 ISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
ISDFG + + S + GT ++APEV+ + S +D W
Sbjct: 160 ISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCW 202
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 14 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 69
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 70 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIY 128
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T + T + A
Sbjct: 129 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRWYRA 186
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 223
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 15 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 70
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 71 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIY 129
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T + T + A
Sbjct: 130 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRWYRA 187
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 224
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 103/215 (47%), Gaps = 23/215 (10%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGKLRSEIVAVKKVREQKET---------DIRHL 303
WE+P E +L +GSGA G+V F K VAVKK+ ++ ++R L
Sbjct: 14 WEVP-ERYQNLSPVGSGAYGSVCAAFDTK-TGHRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 304 RKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQI 358
+ + H N++ V T A ++ + L N++K +++ + QI
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQI 130
Query: 359 AAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPE 418
G+ Y+HS IIHRDLK N+ + E KI DFG R +++ F T + APE
Sbjct: 131 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMA--GFVATRWYRAPE 188
Query: 419 VIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
++ N + +DIWS G ++ ELLT T + D
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 223
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 16 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 71
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 72 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIY 130
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T + T + A
Sbjct: 131 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRWYRA 188
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 225
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 105/226 (46%), Gaps = 33/226 (14%)
Query: 252 LRDEWEIPFES----ISDLQ----------WLGSGAQGAVFSGKLRSEIVAVKKVREQKE 297
L + +PFES + DL+ +G G G V+ G LR K R +
Sbjct: 16 LSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES 75
Query: 298 TD--------IRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQ 349
+ I L HP++V G C + ++ +Y G L L G ++P
Sbjct: 76 SQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLY-GSDLPTM 134
Query: 350 RLYNWARQI------AAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCR---EWN 400
+ +W +++ A G++YLH++ IIHRD+KS N+L+ KI+DFG + E
Sbjct: 135 SM-SWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELG 193
Query: 401 NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCET 446
GT+ ++ PE + ++K D++S+G+VL+E+L +
Sbjct: 194 QTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARS 239
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 88/188 (46%), Gaps = 13/188 (6%)
Query: 269 LGSGAQGAVFSGKLR--SEIVAVKKVREQKET---------DIRHLRKLNHPNIVKFKGV 317
+G G+ G VF + R +IVA+KK E ++ +IR L++L HPN+V V
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 318 CTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKS 377
+ +V EYC + L+ L + VP + + Q +N+ H IHRD+K
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKP 130
Query: 378 PNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APE-VIRNEQCSDKIDIWSYG 435
N+LI K+ DFG R S W +PE ++ + Q +D+W+ G
Sbjct: 131 ENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIG 190
Query: 436 IVLWELLT 443
V ELL+
Sbjct: 191 CVFAELLS 198
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 89/179 (49%), Gaps = 7/179 (3%)
Query: 271 SGAQGAVFSGKLRSEIVAVKKVREQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEY 330
SG Q AV LR + + RE ++ +R H N+V+ ++ME+
Sbjct: 69 SGRQVAVKMMDLRKQ-----QRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEF 123
Query: 331 CAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKI 390
G L +++ + +++ + + YLH++ +IHRD+KS ++L+ K+
Sbjct: 124 LQGGALTDIVSQ-VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKL 182
Query: 391 SDFGTCREWNNKSTKMS-FAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
SDFG C + + K GT WMAPEVI + ++DIWS GI++ E++ E PY
Sbjct: 183 SDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPY 241
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 45/101 (44%), Gaps = 8/101 (7%)
Query: 133 LTGMAEQVRLS---IPPQYQLELIGGPYWFLAGCTTPDALAESIGLGVLIGSKEEAKISD 189
LT + QVRL+ I + L Y G D ++SI L+ K+SD
Sbjct: 129 LTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSI----LLTLDGRVKLSD 184
Query: 190 FGTCREWNNKSTKMS-FAGTVAWMAPEVIRNEQCSDKIDIW 229
FG C + + K GT WMAPEVI + ++DIW
Sbjct: 185 FGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIW 225
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 103/215 (47%), Gaps = 23/215 (10%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGKLRSEIVAVKKVREQKET---------DIRHL 303
WE+P E +L +GSGA G+V F K VAVKK+ ++ ++R L
Sbjct: 14 WEVP-ERYQNLSPVGSGAYGSVCAAFDTK-TGHRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 304 RKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQI 358
+ + H N++ V T A ++ + L N++K ++ + QI
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CAKLTDDHVQFLIYQI 130
Query: 359 AAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPE 418
G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T + T + APE
Sbjct: 131 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--GYVATRWYRAPE 188
Query: 419 VIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
++ N + +DIWS G ++ ELLT T + D
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 223
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 118/275 (42%), Gaps = 40/275 (14%)
Query: 257 EIPFESISDLQWLGSGAQGAVFSGKLR----SEIVAVKKVR------EQK----ETDIRH 302
E+ + + + LG GA G V K+R +I+AVK++R EQK + DI
Sbjct: 3 EVKADDLEPIMELGRGAYGVV--EKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDIS- 59
Query: 303 LRKLNHPNIVKFKGVCTQAPCYCIVMEY--CAYGPLYNLLKD-GEEVPPQRLYNWARQIA 359
+R ++ P V F G + I ME + Y + D G+ +P L A I
Sbjct: 60 MRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIV 119
Query: 360 AGMNYLHSK-QIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPE 418
+ +LHSK +IHRD+K NVLI + + K+ DFG + K AG +MAPE
Sbjct: 120 KALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPE 179
Query: 419 VIRNE----QCSDKIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHL----PIP 470
I E S K DIWS GI + EL PY DS WG L P P
Sbjct: 180 RINPELNQKGYSVKSDIWSLGITMIELAILRFPY---DS----WGTPFQQLKQVVEEPSP 232
Query: 471 STCPDGFQL----LMKMCWSNAPSSRPSFKQILSH 501
D F C RP++ +++ H
Sbjct: 233 QLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 267
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 13/195 (6%)
Query: 266 LQWLGSGAQGAVFSGK--LRSEIVAVKKVREQK-------ETDIRHLRKLNHPNIVKFKG 316
++ LGSGA VF K L ++ A+K +++ E +I L+K+ H NIV +
Sbjct: 14 MEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLED 73
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLK 376
+ Y +VM+ + G L++ + + + +Q+ + + YLH I+HRDLK
Sbjct: 74 IYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLK 133
Query: 377 SPNVLIGSKEEAK---ISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWS 433
N+L + EE I+DFG + N + GT ++APEV+ + S +D WS
Sbjct: 134 PENLLYLTPEENSKIMITDFGLSKMEQNGIMSTA-CGTPGYVAPEVLAQKPYSKAVDCWS 192
Query: 434 YGIVLWELLTCETPY 448
G++ + LL P+
Sbjct: 193 IGVITYILLCGYPPF 207
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 105/217 (48%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 25 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 80
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 81 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIY 139
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI DFG R ++ T + T + A
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT--GYVATRWYRA 197
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 234
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 105/217 (48%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 25 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 80
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 81 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIY 139
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI DFG R ++ T + T + A
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT--GYVATRWYRA 197
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 234
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 104/214 (48%), Gaps = 29/214 (13%)
Query: 263 ISDLQWLGSGAQGAVFSGKLR--SEIVAVK---KVREQKETDIRH-----LRKLNHPNIV 312
+SD+ LG GA VF G+ + ++ A+K + + D++ L+KLNH NIV
Sbjct: 13 LSDI--LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIV 70
Query: 313 KFKGVC--TQAPCYCIVMEYCAYGPLYNLLK---DGEEVPPQRLYNWARQIAAGMNYLHS 367
K + T ++ME+C G LY +L+ + +P R + GMN+L
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE 130
Query: 368 KQIIHRDLKSPNVL--IGSKEEA--KISDFGTCREWNNKSTKMSFAGTVAWMAPE----- 418
I+HR++K N++ IG ++ K++DFG RE + + GT ++ P+
Sbjct: 131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYERA 190
Query: 419 VIRNE---QCSDKIDIWSYGIVLWELLTCETPYK 449
V+R + + +D+WS G+ + T P++
Sbjct: 191 VLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR 224
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 105/217 (48%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 25 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 80
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 81 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIY 139
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI DFG R ++ T + T + A
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT--GYVATRWYRA 197
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 234
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 16/203 (7%)
Query: 266 LQWLGSGAQGAVFSGKLRS--EIVAVKKVREQKETD---------IRHLRKLNHPNIVKF 314
L+ +G G G VF K R EIVA+K+VR + + I L++L H NIV+
Sbjct: 7 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRL 66
Query: 315 KGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRD 374
V +V E+C ++ P+ + ++ Q+ G+ + HS+ ++HRD
Sbjct: 67 HDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRD 126
Query: 375 LKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIRNEQC-SDKIDIW 432
LK N+LI E K++DFG R + S W P+V+ + S ID+W
Sbjct: 127 LKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMW 186
Query: 433 SYGIVLWELLTCETPY---KDVD 452
S G + EL P DVD
Sbjct: 187 SAGCIFAELANAARPLFPGNDVD 209
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 18 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 73
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIY 132
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI D+G R +++ T + T + A
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMT--GYVATRWYRA 190
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 108/202 (53%), Gaps = 14/202 (6%)
Query: 260 FESISDLQWLGSGAQGAVF------SG-KLRSEIVAVKKVREQKET--DIRHLRKLNHPN 310
F ++S + LG G G V +G KL ++I+ + +++++E +I + +L+H N
Sbjct: 88 FYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHAN 147
Query: 311 IVKFKGVCTQAPCYCIVMEYCAYGPLYN-LLKDGEEVPPQRLYNWARQIAAGMNYLHSKQ 369
+++ +VMEY G L++ ++ + + + +QI G+ ++H
Sbjct: 148 LIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY 207
Query: 370 IIHRDLKSPNVLIGSKE--EAKISDFGTCREWN-NKSTKMSFAGTVAWMAPEVIRNEQCS 426
I+H DLK N+L +++ + KI DFG R + + K++F GT ++APEV+ + S
Sbjct: 208 ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF-GTPEFLAPEVVNYDFVS 266
Query: 427 DKIDIWSYGIVLWELLTCETPY 448
D+WS G++ + LL+ +P+
Sbjct: 267 FPTDMWSVGVIAYMLLSGLSPF 288
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 183 EEAKISDFGTCREWN-NKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
++ KI DFG R + + K++F GT ++APEV+ + S D+W
Sbjct: 226 KQIKIIDFGLARRYKPREKLKVNF-GTPEFLAPEVVNYDFVSFPTDMW 272
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 132/259 (50%), Gaps = 32/259 (12%)
Query: 269 LGSGAQGA-VFSGKLRSEIVAVKKVREQ----KETDIRHLRKLN-HPNIVKFKGVCTQAP 322
LG GA+G V+ G + VAVK++ + + +++ LR+ + HPN++++ CT+
Sbjct: 32 LGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRY--FCTEKD 89
Query: 323 --CYCIVMEYCAYG-PLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPN 379
I +E CA Y KD + + + +Q +G+ +LHS I+HRDLK N
Sbjct: 90 RQFQYIAIELCAATLQEYVEQKDFAHLGLEPI-TLLQQTTSGLAHLHSLNIVHRDLKPHN 148
Query: 380 VLIG-----SKEEAKISDFGTCREW----NNKSTKMSFAGTVAWMAPEVIRNEQCSDK-- 428
+LI K +A ISDFG C++ ++ S + GT W+APE++ +E C +
Sbjct: 149 ILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEML-SEDCKENPT 207
Query: 429 --IDIWSYGIVLWELLT-CETPY-KDVDSSAIIWGVGSSSLHLPIPSTCPD--GFQLLMK 482
+DI+S G V + +++ P+ K + A I +G+ SL P D +L+ K
Sbjct: 208 YTVDIFSAGCVFYYVISEGSHPFGKSLQRQANIL-LGACSLDCLHPEKHEDVIARELIEK 266
Query: 483 MCWSNAPSSRPSFKQILSH 501
M + P RPS K +L H
Sbjct: 267 MIAMD-PQKRPSAKHVLKH 284
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 9/57 (15%)
Query: 181 SKEEAKISDFGTCREW----NNKSTKMSFAGTVAWMAPEVIRNEQCSDK----IDIW 229
K +A ISDFG C++ ++ S + GT W+APE++ +E C + +DI+
Sbjct: 158 GKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEML-SEDCKENPTYTVDIF 213
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 12/204 (5%)
Query: 260 FESISDLQWLGSGAQGAVFSGK-LRSEIVAVKKVREQKE------TDIRH---LRKLNHP 309
E L+ +G G G V+ K + IVA+K++R E T IR L++L+HP
Sbjct: 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHP 79
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQ 369
NIV V C +V E+ L ++ + ++ + Q+ G+ + H +
Sbjct: 80 NIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR 139
Query: 370 IIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIR-NEQCSD 427
I+HRDLK N+LI S K++DFG R + + W AP+V+ +++ S
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYST 199
Query: 428 KIDIWSYGIVLWELLTCETPYKDV 451
+DIWS G + E++T + + V
Sbjct: 200 SVDIWSIGCIFAEMITGKPLFPGV 223
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 107/220 (48%), Gaps = 33/220 (15%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 18 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 73
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIY 132
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA--- 413
QI G+ Y+HS IIHRDLK N+ + E KI DFG R +++ T G VA
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GXVATRW 187
Query: 414 WMAPEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
+ APE++ N + +DIWS G ++ ELLT T + D
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 12/204 (5%)
Query: 260 FESISDLQWLGSGAQGAVFSGK-LRSEIVAVKKVREQKE------TDIRH---LRKLNHP 309
E L+ +G G G V+ K + IVA+K++R E T IR L++L+HP
Sbjct: 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHP 79
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQ 369
NIV V C +V E+ L ++ + ++ + Q+ G+ + H +
Sbjct: 80 NIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR 139
Query: 370 IIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIR-NEQCSD 427
I+HRDLK N+LI S K++DFG R + + W AP+V+ +++ S
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYST 199
Query: 428 KIDIWSYGIVLWELLTCETPYKDV 451
+DIWS G + E++T + + V
Sbjct: 200 SVDIWSIGCIFAEMITGKPLFPGV 223
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 105/217 (48%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 41 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 96
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 97 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIY 155
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI DFG R +++ + T + A
Sbjct: 156 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMX--GYVATRWYRA 213
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 250
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 50 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-EH 108
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV--PPQRLYN 353
+ R L+ +N P +VK + +VMEY A G +++ L+ P R Y
Sbjct: 109 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY- 167
Query: 354 WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA 413
A QI YLHS +I+RDLK N+LI + +++DFG + K + GT
Sbjct: 168 -AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGATWTLCGTPE 224
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
++APE+I ++ + +D W+ G++++E+ P+
Sbjct: 225 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 64/151 (42%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
+LI + +++DFG + K + GT ++APE+I ++ + +D W Y
Sbjct: 193 LLIDQQGYIQVTDFGFAKRV--KGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 250
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L++ +
Sbjct: 251 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVN 310
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 311 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 341
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 110/214 (51%), Gaps = 24/214 (11%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-EH 87
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKD-GEEVPPQRLYNW 354
+ R L+ +N P +VK + +VMEY A G +++ L+ G P + +
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARF-Y 146
Query: 355 ARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAW 414
A QI YLHS +I+RDLK N+LI + +++DFG + ++ + GT +
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEY 204
Query: 415 MAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
+APE+I ++ + +D W+ G++++E+ P+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
+LI + +++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L++ +
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVN 289
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 290 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 320
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 109/215 (50%), Gaps = 26/215 (12%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-EH 87
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV--PPQRLYN 353
+ R L+ +N P +VK + +VMEY A G +++ L+ P R Y
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY- 146
Query: 354 WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA 413
A QI YLHS +I+RDLK N+LI + +++DFG + ++ + GT
Sbjct: 147 -AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLX--GTPE 203
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
++APE+I ++ + +D W+ G++++E+ P+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
+LI + +++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWXLX--GTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L++ +
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVN 289
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 290 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 320
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 101/227 (44%), Gaps = 20/227 (8%)
Query: 243 RIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVRE--QKET 298
R F S + D + +L+ +GSGAQG V + + VA+KK+ Q +T
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQT 65
Query: 299 DIRH-------LRKLNHPNIVKFKGVCTQAPCY------CIVMEYCAYGPLYNLLKDGEE 345
+ ++ +NH NI+ V T IVME L +++ E
Sbjct: 66 HAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQ--ME 122
Query: 346 VPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTK 405
+ +R+ Q+ G+ +LHS IIHRDLK N+++ S KI DFG R
Sbjct: 123 LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM 182
Query: 406 MSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
+ T + APEVI + +DIWS G+++ E++ + D
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTD 229
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
Query: 148 YQLELIGGPYWFLAGCTTPDALAESIGLGVLIGSKEEAKISDFGTCREWNNKSTKMSFAG 207
YQ+ L+G + AG D +I ++ S KI DFG R +
Sbjct: 133 YQM-LVGIKHLHSAGIIHRDLKPSNI----VVKSDATLKILDFGLARTAGTSFMMTPYVV 187
Query: 208 TVAWMAPEVIRNEQCSDKIDIW 229
T + APEVI + +DIW
Sbjct: 188 TRYYRAPEVILGMGYKENVDIW 209
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 99/199 (49%), Gaps = 20/199 (10%)
Query: 264 SDLQWLGSGAQGAVFSG--KLRSEIVAVKKVR--------EQKETDIRHLRKLNHPNIVK 313
+ LQ++G GA G V S +R VA+KK+ ++ +I+ L + H N++
Sbjct: 46 TQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIG 105
Query: 314 FKGVCTQAPCYCI----VMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQ 369
+ + + + +++ LY LLK +++ + + QI G+ Y+HS
Sbjct: 106 IRDILRASTLEAMRDVYIVQDLMETDLYKLLK-SQQLSNDHICYFLYQILRGLKYIHSAN 164
Query: 370 IIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSF----AGTVAWMAPEVIRNEQC 425
++HRDLK N+LI + + KI DFG R + + F T + APE++ N +
Sbjct: 165 VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKG 224
Query: 426 SDK-IDIWSYGIVLWELLT 443
K IDIWS G +L E+L+
Sbjct: 225 YTKSIDIWSVGCILAEMLS 243
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 110/214 (51%), Gaps = 24/214 (11%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-EH 87
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKD-GEEVPPQRLYNW 354
+ R L+ +N P +VK + +VMEY A G +++ L+ G P + +
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-Y 146
Query: 355 ARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAW 414
A QI YLHS +I+RDLK N+LI + +++DFG + ++ + GT +
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEY 204
Query: 415 MAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
+APE+I ++ + +D W+ G++++E+ P+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
+LI + +++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L++ +
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVN 289
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 290 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 320
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 110/214 (51%), Gaps = 24/214 (11%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-EH 87
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKD-GEEVPPQRLYNW 354
+ R L+ +N P +VK + +VMEY A G +++ L+ G P + +
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-Y 146
Query: 355 ARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAW 414
A QI YLHS +I+RDLK N+LI + +++DFG + ++ + GT +
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEY 204
Query: 415 MAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
+APE+I ++ + +D W+ G++++E+ P+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
+LI + +++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L++ +
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVN 289
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 290 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 320
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 115/235 (48%), Gaps = 26/235 (11%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-EH 87
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV--PPQRLYN 353
+ R L+ +N P +VK + +VMEY A G +++ L+ P R Y
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY- 146
Query: 354 WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA 413
A QI YLHS +I+RDLK N+LI + +++DFG + ++ + GT
Sbjct: 147 -AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPE 203
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLP 468
++APE+I ++ + +D W+ G++++E+ P+ + I + S + P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFP 258
Score = 28.9 bits (63), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 64/151 (42%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
+LI + +++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + ++ + P SDL+ L + G L++ +
Sbjct: 230 EMAAGYPPFFADEPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVN 289
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 290 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 320
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 110/214 (51%), Gaps = 24/214 (11%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 24 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-EH 82
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKD-GEEVPPQRLYNW 354
+ R L+ +N P +VK + +VMEY A G +++ L+ G P + +
Sbjct: 83 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-Y 141
Query: 355 ARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAW 414
A QI YLHS +I+RDLK N+LI + +++DFG + ++ + GT +
Sbjct: 142 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEY 199
Query: 415 MAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
+APE+I ++ + +D W+ G++++E+ P+
Sbjct: 200 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 233
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
+LI + +++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 167 LLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 224
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L++ +
Sbjct: 225 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVN 284
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 285 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 315
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 110/214 (51%), Gaps = 24/214 (11%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 50 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-EH 108
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKD-GEEVPPQRLYNW 354
+ R L+ +N P +VK + +VMEY A G +++ L+ G P + +
Sbjct: 109 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-Y 167
Query: 355 ARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAW 414
A QI YLHS +I+RDLK N+LI + +++DFG + ++ + GT +
Sbjct: 168 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEY 225
Query: 415 MAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
+APE+I ++ + +D W+ G++++E+ P+
Sbjct: 226 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
+LI + +++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 193 LLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 250
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L++ +
Sbjct: 251 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVN 310
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 311 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 341
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 110/214 (51%), Gaps = 24/214 (11%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-EH 87
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKD-GEEVPPQRLYNW 354
+ R L+ +N P +VK + +VMEY A G +++ L+ G P + +
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-Y 146
Query: 355 ARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAW 414
A QI YLHS +I+RDLK N+LI + +++DFG + ++ + GT +
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEY 204
Query: 415 MAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
+APE+I ++ + +D W+ G++++E+ P+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
+LI + +++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L++ +
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVN 289
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 290 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 320
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 109/215 (50%), Gaps = 26/215 (12%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 30 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-EH 88
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV--PPQRLYN 353
+ R L+ +N P +VK + +VMEY A G +++ L+ P R Y
Sbjct: 89 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY- 147
Query: 354 WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA 413
A QI YLHS +I+RDLK N+LI + +++DFG + ++ + GT
Sbjct: 148 -AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPE 204
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
++APE+I ++ + +D W+ G++++E+ P+
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
+LI + +++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 173 LLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L++ +
Sbjct: 231 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVN 290
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 291 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 321
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 109/215 (50%), Gaps = 26/215 (12%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-EH 87
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV--PPQRLYN 353
+ R L+ +N P +VK + +VMEY A G +++ L+ P R Y
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY- 146
Query: 354 WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA 413
A QI YLHS +I+RDLK N+LI + +++DFG + ++ + GT
Sbjct: 147 -AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPE 203
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
++APE+I ++ + +D W+ G++++E+ P+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
+LI + +++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L++ +
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVN 289
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 290 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 320
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 109/215 (50%), Gaps = 26/215 (12%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-EH 87
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV--PPQRLYN 353
+ R L+ +N P +VK + +VMEY A G +++ L+ P R Y
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY- 146
Query: 354 WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA 413
A QI YLHS +I+RDLK N+LI + +++DFG + ++ + GT
Sbjct: 147 -AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPE 203
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
++APE+I ++ + +D W+ G++++E+ P+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
+LI + +++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L++ +
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVN 289
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 290 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 320
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 109/215 (50%), Gaps = 26/215 (12%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 16 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-EH 74
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV--PPQRLYN 353
+ R L+ +N P +VK + +VMEY A G +++ L+ P R Y
Sbjct: 75 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY- 133
Query: 354 WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA 413
A QI YLHS +I+RDLK N+LI + +++DFG + ++ + GT
Sbjct: 134 -AAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXL--CGTPE 190
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
++APE+I ++ + +D W+ G++++E+ P+
Sbjct: 191 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 225
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
+LI + +++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 159 LLIDEQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 216
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L++ +
Sbjct: 217 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVN 276
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 277 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 307
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 109/215 (50%), Gaps = 26/215 (12%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-EH 87
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV--PPQRLYN 353
+ R L+ +N P +VK + +VMEY A G +++ L+ P R Y
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY- 146
Query: 354 WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA 413
A QI YLHS +I+RDLK N+LI + +++DFG + ++ + GT
Sbjct: 147 -AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPE 203
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
++APE+I ++ + +D W+ G++++E+ P+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
+LI + +++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L++ +
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKAFGNLKNGVN 289
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 290 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 320
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 109/215 (50%), Gaps = 26/215 (12%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-EH 87
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV--PPQRLYN 353
+ R L+ +N P +VK + +VMEY A G +++ L+ P R Y
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY- 146
Query: 354 WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA 413
A QI YLHS +I+RDLK N+LI + +++DFG + ++ + GT
Sbjct: 147 -AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPE 203
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
++APE+I ++ + +D W+ G++++E+ P+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 105/217 (48%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 18 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 73
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIY 132
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI FG R +++ T + T + A
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMT--GYVATRWYRA 190
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 104/218 (47%), Gaps = 29/218 (13%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGKLRSEIVAVKKVREQKET---------DIRHL 303
WE+P E +L +GSGA G+V F K VAVKK+ ++ ++R L
Sbjct: 38 WEVP-ERYQNLSPVGSGAYGSVCAAFDTK-TGHRVAVKKLSRPFQSIIHAKRTYRELRLL 95
Query: 304 RKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQI 358
+ + H N++ V T A ++ + L N++K +++ + QI
Sbjct: 96 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQI 154
Query: 359 AAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA---WM 415
G+ Y+HS IIHRDLK N+ + E KI DFG R +++ G VA +
Sbjct: 155 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MXGXVATRWYR 209
Query: 416 APEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
APE++ N + +DIWS G ++ ELLT T + D
Sbjct: 210 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 247
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 103/215 (47%), Gaps = 23/215 (10%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGKLRSEIVAVKKVREQKET---------DIRHL 303
WE+P E +L +GSGA G+V F K VAVKK+ ++ ++R L
Sbjct: 18 WEVP-ERYQNLSPVGSGAYGSVCAAFDTK-TGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 304 RKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQI 358
+ + H N++ V T A ++ + L N++K +++ + QI
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQI 134
Query: 359 AAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPE 418
G+ Y+HS IIHRDLK N+ + E KI DF R +++ T + T + APE
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMT--GYVATRWYRAPE 192
Query: 419 VIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
++ N + +DIWS G ++ ELLT T + D
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 109/253 (43%), Gaps = 12/253 (4%)
Query: 269 LGSGAQGAV--FSGKLRSEIVAVKKVREQ--KETDIRHLRKLNHPNIVKFKGVCTQAPCY 324
LG G+ G V K AVKKVR + + ++ L P IV G + P
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMACAGLTSPRIVPLYGAVREGPWV 141
Query: 325 CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGS 384
I ME G L L+K+ +P R + Q G+ YLHS++I+H D+K+ NVL+ S
Sbjct: 142 NIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSS 201
Query: 385 -KEEAKISDFG--TCREWNNKS----TKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIV 437
A + DFG C + + T GT MAPEV+ C K+D+WS +
Sbjct: 202 DGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCM 261
Query: 438 LWELLTCETPYKDVDSSAIIWGVGSSSLHL-PIPSTCPDGFQLLMKMCWSNAPSSRPSFK 496
+ +L P+ + + S + IP +C ++ P R S
Sbjct: 262 MLHMLNGCHPWTQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQEGLRKEPIHRVSAA 321
Query: 497 QILSHLDIASQEV 509
++ ++ A Q+V
Sbjct: 322 ELGGKVNRALQQV 334
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 6/59 (10%)
Query: 177 VLIGSKEEAKISDFG--TCREWNNKS----TKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L A + DFG C + + T GT MAPEV+ C K+D+W
Sbjct: 198 LLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVW 256
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 265 DLQWLGSGAQGAVF------SGKLRS------EIVAVKKVREQKETDIRHLRKLNHPNIV 312
D + LG G G VF +GKL + + + +K + + + L K++ IV
Sbjct: 189 DFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIV 248
Query: 313 KFKGVCTQAPCYCIVMEYCAYGPL----YNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK 368
C+VM G + YN+ +D R + QI +G+ +LH +
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 369 QIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKM-SFAGTVAWMAPEVIRNEQCSD 427
II+RDLK NVL+ +ISD G E TK +AGT +MAPE++ E+
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDF 368
Query: 428 KIDIWSYGIVLWELLTCETPYK 449
+D ++ G+ L+E++ P++
Sbjct: 369 SVDYFALGVTLYEMIAARGPFR 390
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKM-SFAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ +ISD G E TK +AGT +MAPE++ E+ +D +
Sbjct: 320 VLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYF 373
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 265 DLQWLGSGAQGAVF------SGKLRS------EIVAVKKVREQKETDIRHLRKLNHPNIV 312
D + LG G G VF +GKL + + + +K + + + L K++ IV
Sbjct: 189 DFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIV 248
Query: 313 KFKGVCTQAPCYCIVMEYCAYGPL----YNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK 368
C+VM G + YN+ +D R + QI +G+ +LH +
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 369 QIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKM-SFAGTVAWMAPEVIRNEQCSD 427
II+RDLK NVL+ +ISD G E TK +AGT +MAPE++ E+
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDF 368
Query: 428 KIDIWSYGIVLWELLTCETPYK 449
+D ++ G+ L+E++ P++
Sbjct: 369 SVDYFALGVTLYEMIAARGPFR 390
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKM-SFAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ +ISD G E TK +AGT +MAPE++ E+ +D +
Sbjct: 320 VLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYF 373
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 109/253 (43%), Gaps = 12/253 (4%)
Query: 269 LGSGAQGAV--FSGKLRSEIVAVKKVREQ--KETDIRHLRKLNHPNIVKFKGVCTQAPCY 324
LG G+ G V K AVKKVR + + ++ L P IV G + P
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMACAGLTSPRIVPLYGAVREGPWV 160
Query: 325 CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGS 384
I ME G L L+K+ +P R + Q G+ YLHS++I+H D+K+ NVL+ S
Sbjct: 161 NIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSS 220
Query: 385 -KEEAKISDFG--TCREWNNKSTKM----SFAGTVAWMAPEVIRNEQCSDKIDIWSYGIV 437
A + DFG C + + + GT MAPEV+ C K+D+WS +
Sbjct: 221 DGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCM 280
Query: 438 LWELLTCETPYKDVDSSAIIWGVGSSSLHL-PIPSTCPDGFQLLMKMCWSNAPSSRPSFK 496
+ +L P+ + + S + IP +C ++ P R S
Sbjct: 281 MLHMLNGCHPWTQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQEGLRKEPIHRVSAA 340
Query: 497 QILSHLDIASQEV 509
++ ++ A Q+V
Sbjct: 341 ELGGKVNRALQQV 353
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 6/59 (10%)
Query: 177 VLIGSKEEAKISDFG--TCREWNNKSTKM----SFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L A + DFG C + + + GT MAPEV+ C K+D+W
Sbjct: 217 LLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVW 275
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 265 DLQWLGSGAQGAVF------SGKLRS------EIVAVKKVREQKETDIRHLRKLNHPNIV 312
D + LG G G VF +GKL + + + +K + + + L K++ IV
Sbjct: 189 DFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIV 248
Query: 313 KFKGVCTQAPCYCIVMEYCAYGPL----YNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK 368
C+VM G + YN+ +D R + QI +G+ +LH +
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 369 QIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKM-SFAGTVAWMAPEVIRNEQCSD 427
II+RDLK NVL+ +ISD G E TK +AGT +MAPE++ E+
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDF 368
Query: 428 KIDIWSYGIVLWELLTCETPYK 449
+D ++ G+ L+E++ P++
Sbjct: 369 SVDYFALGVTLYEMIAARGPFR 390
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKM-SFAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ +ISD G E TK +AGT +MAPE++ E+ +D +
Sbjct: 320 VLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYF 373
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 105/217 (48%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 18 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 73
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIY 132
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI D G R +++ T + T + A
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMT--GYVATRWYRA 190
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 16/203 (7%)
Query: 266 LQWLGSGAQGAVFSGKLRS--EIVAVKKVREQKETD---------IRHLRKLNHPNIVKF 314
L+ +G G G VF K R EIVA+K+VR + + I L++L H NIV+
Sbjct: 7 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRL 66
Query: 315 KGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRD 374
V +V E+C ++ P+ + ++ Q+ G+ + HS+ ++HRD
Sbjct: 67 HDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRD 126
Query: 375 LKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIRNEQC-SDKIDIW 432
LK N+LI E K+++FG R + S W P+V+ + S ID+W
Sbjct: 127 LKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMW 186
Query: 433 SYGIVLWELLTCETPY---KDVD 452
S G + EL P DVD
Sbjct: 187 SAGCIFAELANAGRPLFPGNDVD 209
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 130/276 (47%), Gaps = 45/276 (16%)
Query: 267 QWLGSGAQG-AVFSGKLRSEIVAVKKVR----EQKETDIRHLRKLN-HPNIVKFKGVCTQ 320
+ LG G+ G VF G + VAVK++ + +I+ L + + HPN++++ T
Sbjct: 39 KILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETT 98
Query: 321 APCYCIVMEYCAYGPLYNLLKD----GEEVPPQRLYN---WARQIAAGMNYLHSKQIIHR 373
I +E C L +L++ E + Q+ YN RQIA+G+ +LHS +IIHR
Sbjct: 99 DRFLYIALELCNLN-LQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHR 157
Query: 374 DLKSPNVLIGSKEEAK-------------ISDFGTCREWNNKSTKMSF-----AGTVAWM 415
DLK N+L+ + ISDFG C++ ++ +GT W
Sbjct: 158 DLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWR 217
Query: 416 APEVIR---NEQCSDKIDIWSYGIVLWELLT-CETPYKDVDS--SAIIWGVGS----SSL 465
APE++ + + IDI+S G V + +L+ + P+ D S S II G+ S L
Sbjct: 218 APELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCL 277
Query: 466 HLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
H S + L+ +M + P RP+ ++L H
Sbjct: 278 H--DRSLIAEATDLISQMI-DHDPLKRPTAMKVLRH 310
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 265 DLQWLGSGAQGAVF------SGKLRS------EIVAVKKVREQKETDIRHLRKLNHPNIV 312
D + LG G G VF +GKL + + + +K + + + L K++ IV
Sbjct: 189 DFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIV 248
Query: 313 KFKGVCTQAPCYCIVMEYCAYGPL----YNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK 368
C+VM G + YN+ +D R + QI +G+ +LH +
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 369 QIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKM-SFAGTVAWMAPEVIRNEQCSD 427
II+RDLK NVL+ +ISD G E TK +AGT +MAPE++ E+
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDF 368
Query: 428 KIDIWSYGIVLWELLTCETPYK 449
+D ++ G+ L+E++ P++
Sbjct: 369 SVDYFALGVTLYEMIAARGPFR 390
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKM-SFAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ +ISD G E TK +AGT +MAPE++ E+ +D +
Sbjct: 320 VLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYF 373
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 101/227 (44%), Gaps = 20/227 (8%)
Query: 243 RIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVRE--QKET 298
R F S + D + +L+ +GSGAQG V + + VA+KK+ Q +T
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 299 DIRH-------LRKLNHPNIVKFKGVCTQAPCY------CIVMEYCAYGPLYNLLKDGEE 345
+ ++ +NH NI+ V T IVME L +++ E
Sbjct: 66 HAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQ--ME 122
Query: 346 VPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTK 405
+ +R+ Q+ G+ +LHS IIHRDLK N+++ S KI DFG R
Sbjct: 123 LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM 182
Query: 406 MSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
+ T + APEVI + +DIWS G+++ E++ + D
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTD 229
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
Query: 148 YQLELIGGPYWFLAGCTTPDALAESIGLGVLIGSKEEAKISDFGTCREWNNKSTKMSFAG 207
YQ+ L+G + AG D +I ++ S KI DFG R +
Sbjct: 133 YQM-LVGIKHLHSAGIIHRDLKPSNI----VVKSDATLKILDFGLARTAGTSFMMTPYVV 187
Query: 208 TVAWMAPEVIRNEQCSDKIDIW 229
T + APEVI + +DIW
Sbjct: 188 TRYYRAPEVILGMGYKENVDIW 209
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 130/276 (47%), Gaps = 45/276 (16%)
Query: 267 QWLGSGAQG-AVFSGKLRSEIVAVKKVR----EQKETDIRHLRKLN-HPNIVKFKGVCTQ 320
+ LG G+ G VF G + VAVK++ + +I+ L + + HPN++++ T
Sbjct: 39 KILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETT 98
Query: 321 APCYCIVMEYCAYGPLYNLLKD----GEEVPPQRLYN---WARQIAAGMNYLHSKQIIHR 373
I +E C L +L++ E + Q+ YN RQIA+G+ +LHS +IIHR
Sbjct: 99 DRFLYIALELCNLN-LQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHR 157
Query: 374 DLKSPNVLIGSKEEAK-------------ISDFGTCREWNNKSTKMSF-----AGTVAWM 415
DLK N+L+ + ISDFG C++ ++ +GT W
Sbjct: 158 DLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWR 217
Query: 416 APEVIR---NEQCSDKIDIWSYGIVLWELLT-CETPYKDVDS--SAIIWGVGS----SSL 465
APE++ + + IDI+S G V + +L+ + P+ D S S II G+ S L
Sbjct: 218 APELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCL 277
Query: 466 HLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
H S + L+ +M + P RP+ ++L H
Sbjct: 278 H--DRSLIAEATDLISQMI-DHDPLKRPTAMKVLRH 310
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 109/215 (50%), Gaps = 26/215 (12%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-EH 87
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV--PPQRLYN 353
+ R L+ +N P +VK + +VMEY A G +++ L+ P R Y
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY- 146
Query: 354 WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA 413
A QI YLHS +I+RDLK N+LI + +++DFG + ++ + GT
Sbjct: 147 -AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPE 203
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
++APE+I ++ + +D W+ G++++E+ P+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 64/151 (42%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
+LI + +++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L+ +
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVN 289
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 290 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 320
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 105/217 (48%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 18 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 73
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIY 132
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI D G R +++ T + T + A
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMT--GYVATRWYRA 190
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 131/282 (46%), Gaps = 27/282 (9%)
Query: 246 EFKSFVLRDEWEIPFESISD-----LQWLGSGAQGAVFS--GKLRSEIVAVKKVRE---- 294
+F F ++ +I +I D Q LG G G V K E A+K +++
Sbjct: 3 QFPQFHVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA 62
Query: 295 QKETDIRHLRKLNHPNIVK----FKGVCTQAPCYCIVMEYCAYGPLYNLLKD-GEEVPPQ 349
++E ++ H R P+IV+ ++ + C IVME G L++ ++D G++ +
Sbjct: 63 RREVEL-HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTE 121
Query: 350 R-LYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEE---AKISDFGTCREWNNKSTK 405
R + I + YLHS I HRD+K N+L SK K++DFG +E + ++
Sbjct: 122 REASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL 181
Query: 406 MSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGS--- 462
+ T ++APEV+ E+ D+WS G++++ LL P+ AI G+ +
Sbjct: 182 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 241
Query: 463 -SSLHLPIP--STCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
P P S + ++L++ P+ R + + ++H
Sbjct: 242 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 283
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 186 KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
K++DFG +E + ++ + T ++APEV+ E+ D+W
Sbjct: 165 KLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 208
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 105/217 (48%), Gaps = 27/217 (12%)
Query: 256 WEIPFESISDLQWLGSGAQGAV---FSGK--LRSEIVAVKKVREQKET---------DIR 301
WE+P E +L +GSGA G+V F K LR VAVKK+ ++ ++R
Sbjct: 18 WEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELR 73
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWAR 356
L+ + H N++ V T A ++ + L N++K +++ +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIY 132
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMA 416
QI G+ Y+HS IIHRDLK N+ + E KI D G R +++ T + T + A
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMT--GYVATRWYRA 190
Query: 417 PEVIRN-EQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
PE++ N + +DIWS G ++ ELLT T + D
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 131/282 (46%), Gaps = 27/282 (9%)
Query: 246 EFKSFVLRDEWEIPFESISD-----LQWLGSGAQGAVFS--GKLRSEIVAVKKVRE---- 294
+F F ++ +I +I D Q LG G G V K E A+K +++
Sbjct: 2 QFPQFHVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA 61
Query: 295 QKETDIRHLRKLNHPNIVK----FKGVCTQAPCYCIVMEYCAYGPLYNLLKD-GEEVPPQ 349
++E ++ H R P+IV+ ++ + C IVME G L++ ++D G++ +
Sbjct: 62 RREVEL-HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTE 120
Query: 350 R-LYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEE---AKISDFGTCREWNNKSTK 405
R + I + YLHS I HRD+K N+L SK K++DFG +E + ++
Sbjct: 121 REASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL 180
Query: 406 MSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGS--- 462
+ T ++APEV+ E+ D+WS G++++ LL P+ AI G+ +
Sbjct: 181 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 240
Query: 463 -SSLHLPIP--STCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
P P S + ++L++ P+ R + + ++H
Sbjct: 241 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 282
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 186 KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
K++DFG +E + ++ + T ++APEV+ E+ D+W
Sbjct: 164 KLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 207
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 109/215 (50%), Gaps = 26/215 (12%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-EH 87
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV--PPQRLYN 353
+ R L+ +N P +VK + +VMEY A G +++ L+ P R Y
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY- 146
Query: 354 WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA 413
A QI YLHS +I+RDLK N+LI + +++DFG + ++ + GT
Sbjct: 147 -AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPE 203
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
++APE+I ++ + +D W+ G++++++ P+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPF 238
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
+LI + +++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L++ +
Sbjct: 230 QMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVN 289
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 290 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 320
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 131/282 (46%), Gaps = 27/282 (9%)
Query: 246 EFKSFVLRDEWEIPFESISD-----LQWLGSGAQGAVFS--GKLRSEIVAVKKVRE---- 294
+F F ++ +I +I D Q LG G G V K E A+K +++
Sbjct: 4 QFPQFHVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA 63
Query: 295 QKETDIRHLRKLNHPNIVK----FKGVCTQAPCYCIVMEYCAYGPLYNLLKD-GEEVPPQ 349
++E ++ H R P+IV+ ++ + C IVME G L++ ++D G++ +
Sbjct: 64 RREVEL-HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTE 122
Query: 350 R-LYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEE---AKISDFGTCREWNNKSTK 405
R + I + YLHS I HRD+K N+L SK K++DFG +E + ++
Sbjct: 123 REASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL 182
Query: 406 MSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGS--- 462
+ T ++APEV+ E+ D+WS G++++ LL P+ AI G+ +
Sbjct: 183 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 242
Query: 463 -SSLHLPIP--STCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
P P S + ++L++ P+ R + + ++H
Sbjct: 243 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 284
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 186 KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
K++DFG +E + ++ + T ++APEV+ E+ D+W
Sbjct: 166 KLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 209
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 97/198 (48%), Gaps = 16/198 (8%)
Query: 260 FESISDLQWLGSGAQGAVFSGKLR-SEIVAVKKVREQKE------TDIRH---LRKLNHP 309
E L+ +G G G V+ + E A+KK+R +KE T IR L++L H
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 310 NIVKFKGVCTQAPCYCIVMEYCA--YGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHS 367
NIVK V +V E+ L ++ + G E + ++ Q+ G+ Y H
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAK--SFLLQLLNGIAYCHD 118
Query: 368 KQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIR-NEQC 425
++++HRDLK N+LI + E KI+DFG R + K + W AP+V+ +++
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKY 178
Query: 426 SDKIDIWSYGIVLWELLT 443
S IDIWS G + E++
Sbjct: 179 STTIDIWSVGCIFAEMVN 196
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIR-NEQCSDKIDIW 229
+LI + E KI+DFG R + K + W AP+V+ +++ S IDIW
Sbjct: 131 LLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIW 185
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 22/195 (11%)
Query: 269 LGSGAQGAVFSGK--LRSEIVAVKKVREQKETD------------IRHLRKLNHPNIVKF 314
+G GA G V+ + VA+K VR + +R L HPN+V+
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 315 KGVCTQAPC-----YCIVMEYCAYGPLYNLLKDGEE--VPPQRLYNWARQIAAGMNYLHS 367
VC + +V E+ L L +P + + + RQ G+++LH+
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQD-LRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA 130
Query: 368 KQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSD 427
I+HRDLK N+L+ S K++DFG R ++ + T+ + APEV+ +
Sbjct: 131 NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVLLQSTYAT 190
Query: 428 KIDIWSYGIVLWELL 442
+D+WS G + E+
Sbjct: 191 PVDMWSVGCIFAEMF 205
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ S K++DFG R ++ + T+ + APEV+ + +D+W
Sbjct: 143 ILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVLLQSTYATPVDMW 195
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 97/198 (48%), Gaps = 16/198 (8%)
Query: 260 FESISDLQWLGSGAQGAVFSGKLR-SEIVAVKKVREQKE------TDIRH---LRKLNHP 309
E L+ +G G G V+ + E A+KK+R +KE T IR L++L H
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 310 NIVKFKGVCTQAPCYCIVMEYCA--YGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHS 367
NIVK V +V E+ L ++ + G E + ++ Q+ G+ Y H
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAK--SFLLQLLNGIAYCHD 118
Query: 368 KQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIR-NEQC 425
++++HRDLK N+LI + E KI+DFG R + K + W AP+V+ +++
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKY 178
Query: 426 SDKIDIWSYGIVLWELLT 443
S IDIWS G + E++
Sbjct: 179 STTIDIWSVGCIFAEMVN 196
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIR-NEQCSDKIDIW 229
+LI + E KI+DFG R + K + W AP+V+ +++ S IDIW
Sbjct: 131 LLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIW 185
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 133/282 (47%), Gaps = 53/282 (18%)
Query: 267 QWLGSGAQG-AVFSGKLRSEIVAVKKVR----EQKETDIRHLRKLN-HPNIVKFKGVCTQ 320
+ LG G+ G VF G + VAVK++ + +I+ L + + HPN++++ T
Sbjct: 21 KILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETT 80
Query: 321 APCYCIVMEYCAYGPLYNLLKD----GEEVPPQRLYN---WARQIAAGMNYLHSKQIIHR 373
I +E C L +L++ E + Q+ YN RQIA+G+ +LHS +IIHR
Sbjct: 81 DRFLYIALELCNLN-LQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHR 139
Query: 374 DLKSPNVLIGSKEEAK-------------ISDFGTCREWNNKSTKMSF-------AGTVA 413
DLK N+L+ + ISDFG C++ + S + SF +GT
Sbjct: 140 DLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD--SGQSSFRTNLNNPSGTSG 197
Query: 414 WMAPEVIR-------NEQCSDKIDIWSYGIVLWELLT-CETPYKDVDS--SAIIWGVGS- 462
W APE++ + + IDI+S G V + +L+ + P+ D S S II G+ S
Sbjct: 198 WRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSL 257
Query: 463 ---SSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
LH S + L+ +M + P RP+ ++L H
Sbjct: 258 DEMKCLH--DRSLIAEATDLISQMI-DHDPLKRPTAMKVLRH 296
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 109/215 (50%), Gaps = 26/215 (12%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-EH 87
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV--PPQRLYN 353
+ R L+ +N P +VK + +VMEY A G +++ L+ P R Y
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY- 146
Query: 354 WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA 413
A QI YLHS +I+RDLK N++I + +++DFG + ++ + GT
Sbjct: 147 -AAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPE 203
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
++APE+I ++ + +D W+ G++++E+ P+
Sbjct: 204 YLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 97/198 (48%), Gaps = 16/198 (8%)
Query: 260 FESISDLQWLGSGAQGAVFSGKLR-SEIVAVKKVREQKE------TDIRH---LRKLNHP 309
E L+ +G G G V+ + E A+KK+R +KE T IR L++L H
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 310 NIVKFKGVCTQAPCYCIVMEYCA--YGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHS 367
NIVK V +V E+ L ++ + G E + ++ Q+ G+ Y H
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAK--SFLLQLLNGIAYCHD 118
Query: 368 KQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIR-NEQC 425
++++HRDLK N+LI + E KI+DFG R + K + W AP+V+ +++
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKY 178
Query: 426 SDKIDIWSYGIVLWELLT 443
S IDIWS G + E++
Sbjct: 179 STTIDIWSVGCIFAEMVN 196
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIR-NEQCSDKIDIW 229
+LI + E KI+DFG R + K + W AP+V+ +++ S IDIW
Sbjct: 131 LLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIW 185
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 131/282 (46%), Gaps = 27/282 (9%)
Query: 246 EFKSFVLRDEWEIPFESISD-----LQWLGSGAQGAVFS--GKLRSEIVAVKKVRE---- 294
+F F ++ +I +I D Q LG G G V K E A+K +++
Sbjct: 12 QFPQFHVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA 71
Query: 295 QKETDIRHLRKLNHPNIVK----FKGVCTQAPCYCIVMEYCAYGPLYNLLKD-GEEVPPQ 349
++E ++ H R P+IV+ ++ + C IVME G L++ ++D G++ +
Sbjct: 72 RREVEL-HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTE 130
Query: 350 R-LYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEE---AKISDFGTCREWNNKSTK 405
R + I + YLHS I HRD+K N+L SK K++DFG +E + ++
Sbjct: 131 REASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL 190
Query: 406 MSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGS--- 462
+ T ++APEV+ E+ D+WS G++++ LL P+ AI G+ +
Sbjct: 191 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 250
Query: 463 -SSLHLPIP--STCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
P P S + ++L++ P+ R + + ++H
Sbjct: 251 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 292
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 186 KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
K++DFG +E + ++ + T ++APEV+ E+ D+W
Sbjct: 174 KLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 217
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 121/256 (47%), Gaps = 22/256 (8%)
Query: 267 QWLGSGAQGAVFS--GKLRSEIVAVKKVRE----QKETDIRHLRKLNHPNIVK----FKG 316
Q LG G G V K E A+K +++ ++E ++ H R P+IV+ ++
Sbjct: 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVEL-HWRASQCPHIVRIVDVYEN 82
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKD-GEEVPPQR-LYNWARQIAAGMNYLHSKQIIHRD 374
+ C IVME G L++ ++D G++ +R + I + YLHS I HRD
Sbjct: 83 LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 142
Query: 375 LKSPNVLIGSKEE---AKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDI 431
+K N+L SK K++DFG +E + ++ + T ++APEV+ E+ D+
Sbjct: 143 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 202
Query: 432 WSYGIVLWELLTCETPYKDVDSSAIIWGVGS----SSLHLPIP--STCPDGFQLLMKMCW 485
WS G++++ LL P+ AI G+ + P P S + ++L++
Sbjct: 203 WSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLL 262
Query: 486 SNAPSSRPSFKQILSH 501
P+ R + + ++H
Sbjct: 263 KTEPTQRMTITEFMNH 278
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 186 KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
K++DFG +E + ++ + T ++APEV+ E+ D+W
Sbjct: 160 KLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 203
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 121/256 (47%), Gaps = 22/256 (8%)
Query: 267 QWLGSGAQGAVFS--GKLRSEIVAVKKVRE----QKETDIRHLRKLNHPNIVK----FKG 316
Q LG G G V K E A+K +++ ++E ++ H R P+IV+ ++
Sbjct: 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVEL-HWRASQCPHIVRIVDVYEN 82
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKD-GEEVPPQR-LYNWARQIAAGMNYLHSKQIIHRD 374
+ C IVME G L++ ++D G++ +R + I + YLHS I HRD
Sbjct: 83 LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 142
Query: 375 LKSPNVLIGSKEE---AKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDI 431
+K N+L SK K++DFG +E + ++ + T ++APEV+ E+ D+
Sbjct: 143 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 202
Query: 432 WSYGIVLWELLTCETPYKDVDSSAIIWGVGS----SSLHLPIP--STCPDGFQLLMKMCW 485
WS G++++ LL P+ AI G+ + P P S + ++L++
Sbjct: 203 WSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLL 262
Query: 486 SNAPSSRPSFKQILSH 501
P+ R + + ++H
Sbjct: 263 KTEPTQRMTITEFMNH 278
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 186 KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
K++DFG +E + ++ + T ++APEV+ E+ D+W
Sbjct: 160 KLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 203
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 121/256 (47%), Gaps = 22/256 (8%)
Query: 267 QWLGSGAQGAVFS--GKLRSEIVAVKKVRE----QKETDIRHLRKLNHPNIVK----FKG 316
Q LG G G V K E A+K +++ ++E ++ H R P+IV+ ++
Sbjct: 74 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVEL-HWRASQCPHIVRIVDVYEN 132
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKD-GEEVPPQR-LYNWARQIAAGMNYLHSKQIIHRD 374
+ C IVME G L++ ++D G++ +R + I + YLHS I HRD
Sbjct: 133 LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 192
Query: 375 LKSPNVLIGSKEE---AKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDI 431
+K N+L SK K++DFG +E + ++ + T ++APEV+ E+ D+
Sbjct: 193 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 252
Query: 432 WSYGIVLWELLTCETPYKDVDSSAIIWGVGS----SSLHLPIP--STCPDGFQLLMKMCW 485
WS G++++ LL P+ AI G+ + P P S + ++L++
Sbjct: 253 WSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLL 312
Query: 486 SNAPSSRPSFKQILSH 501
P+ R + + ++H
Sbjct: 313 KTEPTQRMTITEFMNH 328
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 186 KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
K++DFG +E + ++ + T ++APEV+ E+ D+W
Sbjct: 210 KLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 253
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 121/256 (47%), Gaps = 22/256 (8%)
Query: 267 QWLGSGAQGAVFS--GKLRSEIVAVKKVRE----QKETDIRHLRKLNHPNIVK----FKG 316
Q LG G G V K E A+K +++ ++E ++ H R P+IV+ ++
Sbjct: 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVEL-HWRASQCPHIVRIVDVYEN 126
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKD-GEEVPPQR-LYNWARQIAAGMNYLHSKQIIHRD 374
+ C IVME G L++ ++D G++ +R + I + YLHS I HRD
Sbjct: 127 LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 186
Query: 375 LKSPNVLIGSKEE---AKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDI 431
+K N+L SK K++DFG +E + ++ + T ++APEV+ E+ D+
Sbjct: 187 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 246
Query: 432 WSYGIVLWELLTCETPYKDVDSSAIIWGVGS----SSLHLPIP--STCPDGFQLLMKMCW 485
WS G++++ LL P+ AI G+ + P P S + ++L++
Sbjct: 247 WSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLL 306
Query: 486 SNAPSSRPSFKQILSH 501
P+ R + + ++H
Sbjct: 307 KTEPTQRMTITEFMNH 322
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 186 KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
K++DFG +E + ++ + T ++APEV+ E+ D+W
Sbjct: 204 KLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 247
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V F+ K+ + ++V +K++ E
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQI-EH 87
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV--PPQRLYN 353
+ R L+ +N P +VK + +VMEY G +++ L+ P R Y
Sbjct: 88 TLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY- 146
Query: 354 WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA 413
A QI YLHS +I+RDLK N+LI + +++DFG + ++ + GT
Sbjct: 147 -AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPE 203
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
++APE+I ++ + +D W+ G++++E+ P+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 64/151 (42%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
+LI + +++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L+ +
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVN 289
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 290 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 320
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V F+ K+ + ++V +K++ E
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQI-EH 87
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV--PPQRLYN 353
+ R L+ +N P +VK + +VMEY G +++ L+ P R Y
Sbjct: 88 TLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY- 146
Query: 354 WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA 413
A QI YLHS +I+RDLK N+LI + +++DFG + ++ + GT
Sbjct: 147 -AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPE 203
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
++APE+I ++ + +D W+ G++++E+ P+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 64/151 (42%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
+LI + +++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L+ +
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVN 289
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 290 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 320
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 22/195 (11%)
Query: 269 LGSGAQGAVFSGK--LRSEIVAVKKVREQKETD------------IRHLRKLNHPNIVKF 314
+G GA G V+ + VA+K VR + +R L HPN+V+
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 315 KGVCTQAPC-----YCIVMEYCAYGPLYNLLKDGEE--VPPQRLYNWARQIAAGMNYLHS 367
VC + +V E+ L L +P + + + RQ G+++LH+
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQD-LRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA 130
Query: 368 KQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSD 427
I+HRDLK N+L+ S K++DFG R ++ + T+ + APEV+ +
Sbjct: 131 NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVLLQSTYAT 190
Query: 428 KIDIWSYGIVLWELL 442
+D+WS G + E+
Sbjct: 191 PVDMWSVGCIFAEMF 205
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ S K++DFG R ++ + T+ + APEV+ + +D+W
Sbjct: 143 ILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVLLQSTYATPVDMW 195
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 22/200 (11%)
Query: 264 SDLQWLGSGAQGAVFSG--KLRSEIVAVKKV--------REQKETDIRHLRKLNHPNIVK 313
++L ++G GA G V S L VA+KK+ ++ +I+ L + H NI+
Sbjct: 30 TNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIG 89
Query: 314 FKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK 368
+ +AP +++ LY LLK + + + + QI G+ Y+HS
Sbjct: 90 INDII-RAPTIEQMKDVYIVQDLMETDLYKLLK-TQHLSNDHICYFLYQILRGLKYIHSA 147
Query: 369 QIIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQ 424
++HRDLK N+L+ + + KI DFG R + ++ + T + APE++ N +
Sbjct: 148 NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 425 CSDK-IDIWSYGIVLWELLT 443
K IDIWS G +L E+L+
Sbjct: 208 GYTKSIDIWSVGCILAEMLS 227
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 22/200 (11%)
Query: 264 SDLQWLGSGAQGAVFSG--KLRSEIVAVKKVR--------EQKETDIRHLRKLNHPNIVK 313
++L ++G GA G V S L VA+KK+ ++ +I+ L + H NI+
Sbjct: 30 TNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 89
Query: 314 FKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK 368
+ +AP +++ LY LLK + + + + QI G+ Y+HS
Sbjct: 90 INDI-IRAPTIEQMKDVYIVQDLMETDLYKLLK-TQHLSNDHICYFLYQILRGLKYIHSA 147
Query: 369 QIIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQ 424
++HRDLK N+L+ + + KI DFG R + ++ + T + APE++ N +
Sbjct: 148 NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 425 CSDK-IDIWSYGIVLWELLT 443
K IDIWS G +L E+L+
Sbjct: 208 GYTKSIDIWSVGCILAEMLS 227
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-EH 87
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV--PPQRLYN 353
+ R L+ +N P +VK + +VMEY A G +++ L+ P R Y
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY- 146
Query: 354 WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA 413
A QI YLHS +I+RDLK N+LI + +++DFG + ++ + GT
Sbjct: 147 -AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPE 203
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
+APE+I ++ + +D W+ G++++E+ P+
Sbjct: 204 ALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V F+ K+ + ++V +K++ E
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQI-EH 87
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV--PPQRLYN 353
+ R L+ +N P +VK + +VMEY G +++ L+ P R Y
Sbjct: 88 TLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY- 146
Query: 354 WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA 413
A QI YLHS +I+RDLK N+LI + +++DFG + ++ + GT
Sbjct: 147 -AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPE 203
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
++APE+I ++ + +D W+ G++++E+ P+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
+LI + +++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L++ +
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVN 289
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 290 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 320
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 130/280 (46%), Gaps = 49/280 (17%)
Query: 267 QWLGSGAQG-AVFSGKLRSEIVAVKKVR----EQKETDIRHLRKLN-HPNIVKFKGVCTQ 320
+ LG G+ G VF G + VAVK++ + +I+ L + + HPN++++ T
Sbjct: 21 KILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETT 80
Query: 321 APCYCIVMEYCAYGPLYNLLKD----GEEVPPQRLYN---WARQIAAGMNYLHSKQIIHR 373
I +E C L +L++ E + Q+ YN RQIA+G+ +LHS +IIHR
Sbjct: 81 DRFLYIALELCNLN-LQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHR 139
Query: 374 DLKSPNVLIGSKEEAK-------------ISDFGTCREWNNKSTKMSF-----AGTVAWM 415
DLK N+L+ + ISDFG C++ ++ +GT W
Sbjct: 140 DLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWR 199
Query: 416 APEVIR-------NEQCSDKIDIWSYGIVLWELLT-CETPYKDVDS--SAIIWGVGS--- 462
APE++ + + IDI+S G V + +L+ + P+ D S S II G+ S
Sbjct: 200 APELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDE 259
Query: 463 -SSLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
LH S + L+ +M + P RP+ ++L H
Sbjct: 260 MKCLH--DRSLIAEATDLISQMI-DHDPLKRPTAMKVLRH 296
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 18/215 (8%)
Query: 299 DIRHLRKLNHPNIVKFKGVC--TQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRL----- 351
+I+ LR+L H N+++ V + +VMEYC G + +L + VP +R
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEML---DSVPEKRFPVCQA 111
Query: 352 YNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCRE---WNNKSTKMSF 408
+ + Q+ G+ YLHS+ I+H+D+K N+L+ + KIS G + T +
Sbjct: 112 HGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTS 171
Query: 409 AGTVAWMAPEVIRNEQCSD--KIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLH 466
G+ A+ PE+ K+DIWS G+ L+ + T P++ + + +G S
Sbjct: 172 QGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYA 231
Query: 467 LPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
IP C L+K P+ R S +QI H
Sbjct: 232 --IPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-EH 87
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV--PPQRLYN 353
+ R L+ +N P +VK + +VMEY A G +++ L+ P R Y
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY- 146
Query: 354 WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA 413
A QI YLHS +I+RDLK N+LI + +++DFG + ++ + GT
Sbjct: 147 -AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPE 203
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
++AP +I ++ + +D W+ G++++E+ P+
Sbjct: 204 YLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 121/256 (47%), Gaps = 22/256 (8%)
Query: 267 QWLGSGAQGAVFS--GKLRSEIVAVKKVRE----QKETDIRHLRKLNHPNIVK----FKG 316
Q LG G G V K E A+K +++ ++E ++ H R P+IV+ ++
Sbjct: 23 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVEL-HWRASQCPHIVRIVDVYEN 81
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKD-GEEVPPQR-LYNWARQIAAGMNYLHSKQIIHRD 374
+ C IVME G L++ ++D G++ +R + I + YLHS I HRD
Sbjct: 82 LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 141
Query: 375 LKSPNVLIGSKEE---AKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDI 431
+K N+L SK K++DFG +E + ++ + T ++APEV+ E+ D+
Sbjct: 142 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 201
Query: 432 WSYGIVLWELLTCETPYKDVDSSAIIWGVGS----SSLHLPIP--STCPDGFQLLMKMCW 485
WS G++++ LL P+ AI G+ + P P S + ++L++
Sbjct: 202 WSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLL 261
Query: 486 SNAPSSRPSFKQILSH 501
P+ R + + ++H
Sbjct: 262 KTEPTQRMTITEFMNH 277
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 186 KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
K++DFG +E + ++ + T ++APEV+ E+ D+W
Sbjct: 159 KLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 202
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 121/256 (47%), Gaps = 22/256 (8%)
Query: 267 QWLGSGAQGAVFS--GKLRSEIVAVKKVRE----QKETDIRHLRKLNHPNIVK----FKG 316
Q LG G G V K E A+K +++ ++E ++ H R P+IV+ ++
Sbjct: 22 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVEL-HWRASQCPHIVRIVDVYEN 80
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKD-GEEVPPQR-LYNWARQIAAGMNYLHSKQIIHRD 374
+ C IVME G L++ ++D G++ +R + I + YLHS I HRD
Sbjct: 81 LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 140
Query: 375 LKSPNVLIGSKEE---AKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDI 431
+K N+L SK K++DFG +E + ++ + T ++APEV+ E+ D+
Sbjct: 141 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 200
Query: 432 WSYGIVLWELLTCETPYKDVDSSAIIWGVGS----SSLHLPIP--STCPDGFQLLMKMCW 485
WS G++++ LL P+ AI G+ + P P S + ++L++
Sbjct: 201 WSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLL 260
Query: 486 SNAPSSRPSFKQILSH 501
P+ R + + ++H
Sbjct: 261 KTEPTQRMTITEFMNH 276
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 186 KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
K++DFG +E + ++ + T ++APEV+ E+ D+W
Sbjct: 158 KLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 201
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 109/214 (50%), Gaps = 24/214 (11%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-EH 87
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKD-GEEVPPQRLYNW 354
+ R L+ +N P +VK + +VMEY G +++ L+ G P + +
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-Y 146
Query: 355 ARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAW 414
A QI YLHS +I+RDLK N++I + K++DFG + ++ + GT +
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL--CGTPEY 204
Query: 415 MAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
+APE+I ++ + +D W+ G++++E+ P+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
++I + K++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 172 LMIDQQGYIKVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L++ +
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVN 289
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 290 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 320
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 30 KWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQI-EH 88
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV--PPQRLYN 353
+ R L+ +N P +VK + +VMEY G +++ L+ P R Y
Sbjct: 89 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY- 147
Query: 354 WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA 413
A QI YLHS +I+RDLK N++I + K++DFG + ++ + GT
Sbjct: 148 -AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL--CGTPE 204
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
++APE+I ++ + +D W+ G++++E+ P+
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
++I + K++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 173 LMIDQQGYIKVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L++ +
Sbjct: 231 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVN 290
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 291 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 321
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 109/214 (50%), Gaps = 24/214 (11%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 22 KWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQI-EH 80
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKD-GEEVPPQRLYNW 354
+ R L+ +N P +VK + +VMEY G +++ L+ G P + +
Sbjct: 81 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-Y 139
Query: 355 ARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAW 414
A QI YLHS +I+RDLK N+LI + +++DFG + ++ + GT +
Sbjct: 140 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEY 197
Query: 415 MAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
+APE+I ++ + +D W+ G++++E+ P+
Sbjct: 198 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
+LI + +++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 165 LLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 222
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L++ +
Sbjct: 223 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVN 282
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 283 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 313
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 22 KWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQI-EH 80
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV--PPQRLYN 353
+ R L+ +N P +VK + +VMEY G +++ L+ P R Y
Sbjct: 81 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY- 139
Query: 354 WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA 413
A QI YLHS +I+RDLK N+LI + +++DFG + ++ + GT
Sbjct: 140 -AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPE 196
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
++APE+I ++ + +D W+ G++++E+ P+
Sbjct: 197 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
+LI + +++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 165 LLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 222
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L++ +
Sbjct: 223 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVN 282
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 283 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 313
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 22/200 (11%)
Query: 264 SDLQWLGSGAQGAVFSG--KLRSEIVAVKKVR--------EQKETDIRHLRKLNHPNIVK 313
++L ++G GA G V S + VA+KK+ ++ +I+ L + H NI+
Sbjct: 46 TNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 105
Query: 314 FKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK 368
+ +AP ++ + LY LLK + + + + QI G+ Y+HS
Sbjct: 106 INDI-IRAPTIEQMKDVYLVTHLMGADLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSA 163
Query: 369 QIIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQ 424
++HRDLK N+L+ + + KI DFG R + ++ + T + APE++ N +
Sbjct: 164 NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 223
Query: 425 CSDK-IDIWSYGIVLWELLT 443
K IDIWS G +L E+L+
Sbjct: 224 GYTKSIDIWSVGCILAEMLS 243
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEI-EH 87
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV--PPQRLYN 353
+ R L+ +N P +VK + +VMEY G +++ L+ P R Y
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY- 146
Query: 354 WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA 413
A QI YLHS +I+RDLK N++I + K++DFG + ++ + GT
Sbjct: 147 -AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXL--CGTPE 203
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
++APE+I ++ + +D W+ G++++E+ P+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
++I + K++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 172 LMIDQQGYIKVTDFGLAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L++ +
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVN 289
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 290 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 320
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 124/284 (43%), Gaps = 51/284 (17%)
Query: 260 FESISDLQWLGSGAQGAVFSGK--LRSEIVAVKKVREQKE------TDIRHLRKLNHPNI 311
FE I+ LG GA G V + L S A+KK+R +E +++ L LNH +
Sbjct: 8 FEEIA---VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYV 64
Query: 312 VKFKGV-------------CTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWA--R 356
V++ + I EYC LY+L+ E + QR W R
Sbjct: 65 VRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIH-SENLNQQRDEYWRLFR 123
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWN---------------N 401
QI ++Y+HS+ IIHR+LK N+ I KI DFG + + +
Sbjct: 124 QILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 402 KSTKMSFAGTVAWMAPEVIRNE-QCSDKIDIWSYGIVLWELLTCETPYK-DVDSSAIIWG 459
S GT ++A EV+ ++KID +S GI+ +E + P+ + I+
Sbjct: 184 SDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI---YPFSTGXERVNILKK 240
Query: 460 VGSSSLHLPIPSTCPDGFQL---LMKMCWSNAPSSRPSFKQILS 500
+ S S+ P P + ++ ++++ + P+ RP + +L+
Sbjct: 241 LRSVSIEFP-PDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLLN 283
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 22/200 (11%)
Query: 264 SDLQWLGSGAQGAVFSG--KLRSEIVAVKKVR--------EQKETDIRHLRKLNHPNIVK 313
++L ++G GA G V S + VA+KK+ ++ +I+ L + H NI+
Sbjct: 26 TNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 85
Query: 314 FKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK 368
+ +AP +++ LY LLK + + + + QI G+ Y+HS
Sbjct: 86 INDII-RAPTIEQMKDVYIVQDLMETDLYKLLK-TQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 369 QIIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQ 424
++HRDLK N+L+ + + KI DFG R + ++ + T + APE++ N +
Sbjct: 144 NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 425 CSDK-IDIWSYGIVLWELLT 443
K IDIWS G +L E+L+
Sbjct: 204 GYTKSIDIWSVGCILAEMLS 223
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-EH 87
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV--PPQRLYN 353
+ R L+ +N P +VK + +VMEY G +++ L+ P R Y
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY- 146
Query: 354 WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA 413
A QI YLHS +I+RDLK N++I + K++DFG + ++ + GT
Sbjct: 147 -AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL--CGTPE 203
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
++APE+I ++ + +D W+ G++++E+ P+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
++I + K++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 172 LMIDQQGYIKVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L++ +
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVN 289
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 290 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 320
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 15 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-EH 73
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV--PPQRLYN 353
+ R L+ +N P +VK + +VMEY G +++ L+ P R Y
Sbjct: 74 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY- 132
Query: 354 WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA 413
A QI YLHS +I+RDLK N+LI + +++DFG + ++ + GT
Sbjct: 133 -AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WTLCGTPE 189
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
++APE+I ++ + +D W+ G++++E+ P+
Sbjct: 190 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 224
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 64/151 (42%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
+LI + +++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 158 LLIDQQGYIQVTDFGFAKRVKGRT--WTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 215
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L+ +
Sbjct: 216 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVN 275
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 276 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 306
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 30 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-EH 88
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV--PPQRLYN 353
+ R L+ +N P +VK + +VMEY G +++ L+ P R Y
Sbjct: 89 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY- 147
Query: 354 WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA 413
A QI YLHS +I+RDLK N+LI + +++DFG + ++ + GT
Sbjct: 148 -AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WTLCGTPE 204
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
++APE+I ++ + +D W+ G++++E+ P+
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
+LI + +++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 173 LLIDQQGYIQVTDFGFAKRVKGRT--WTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L++ +
Sbjct: 231 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVN 290
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 291 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 321
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 22/195 (11%)
Query: 269 LGSGAQGAVFSGK--LRSEIVAVKKVREQKETD------------IRHLRKLNHPNIVKF 314
+G GA G V+ + VA+K VR + +R L HPN+V+
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 315 KGVCTQAPC-----YCIVMEYCAYGPLYNLLKDGEE--VPPQRLYNWARQIAAGMNYLHS 367
VC + +V E+ L L +P + + + RQ G+++LH+
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQD-LRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA 130
Query: 368 KQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSD 427
I+HRDLK N+L+ S K++DFG R ++ + T+ + APEV+ +
Sbjct: 131 NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVLLQSTYAT 190
Query: 428 KIDIWSYGIVLWELL 442
+D+WS G + E+
Sbjct: 191 PVDMWSVGCIFAEMF 205
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ S K++DFG R ++ + T+ + APEV+ + +D+W
Sbjct: 143 ILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVLLQSTYATPVDMW 195
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 120/256 (46%), Gaps = 22/256 (8%)
Query: 267 QWLGSGAQGAVFS--GKLRSEIVAVKKVRE----QKETDIRHLRKLNHPNIVK----FKG 316
Q LG G G V K E A+K +++ ++E ++ H R P+IV+ ++
Sbjct: 22 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVEL-HWRASQCPHIVRIVDVYEN 80
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKD-GEEVPPQR-LYNWARQIAAGMNYLHSKQIIHRD 374
+ C IVME G L++ ++D G++ +R + I + YLHS I HRD
Sbjct: 81 LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 140
Query: 375 LKSPNVLIGSKEE---AKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDI 431
+K N+L SK K++DFG +E + ++ T ++APEV+ E+ D+
Sbjct: 141 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDM 200
Query: 432 WSYGIVLWELLTCETPYKDVDSSAIIWGVGS----SSLHLPIP--STCPDGFQLLMKMCW 485
WS G++++ LL P+ AI G+ + P P S + ++L++
Sbjct: 201 WSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLL 260
Query: 486 SNAPSSRPSFKQILSH 501
P+ R + + ++H
Sbjct: 261 KTEPTQRMTITEFMNH 276
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 30 KWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQI-EH 88
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV--PPQRLYN 353
+ R L+ +N P +VK + +VMEY G +++ L+ P R Y
Sbjct: 89 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY- 147
Query: 354 WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA 413
A QI YLHS +I+RDLK N+LI + +++DFG + ++ + GT
Sbjct: 148 -AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPE 204
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
++APE+I ++ + +D W+ G++++E+ P+
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + +G+G+ G V ++ K+ + ++V +K++ E
Sbjct: 29 KWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-EH 87
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV--PPQRLYN 353
+ R L+ +N P +VK + +VMEY G +++ L+ P R Y
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY- 146
Query: 354 WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA 413
A QI YLHS +I+RDLK N+LI + K++DFG + ++ + GT
Sbjct: 147 -AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXL--CGTPE 203
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
++APE+I ++ + +D W+ G++++E+ P+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
+LI + K++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 172 LLIDQQGYIKVADFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L++ +
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVN 289
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 290 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 320
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 109/214 (50%), Gaps = 24/214 (11%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 30 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-EH 88
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKD-GEEVPPQRLYNW 354
+ R L+ +N P +VK + +VMEY G +++ L+ G P + +
Sbjct: 89 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-Y 147
Query: 355 ARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAW 414
A QI YLHS +I+RDLK N+LI + +++DFG + ++ + GT +
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEY 205
Query: 415 MAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
+APE+I ++ + +D W+ G++++E+ P+
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
+LI + +++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 173 LLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L++ +
Sbjct: 231 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVN 290
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 291 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 321
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 30 KWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQI-EH 88
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV--PPQRLYN 353
+ R L+ +N P +VK + +VMEY G +++ L+ P R Y
Sbjct: 89 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY- 147
Query: 354 WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA 413
A QI YLHS +I+RDLK N+LI + +++DFG + ++ + GT
Sbjct: 148 -AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPE 204
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
++APE+I ++ + +D W+ G++++E+ P+
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
+LI + +++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 173 LLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L++ +
Sbjct: 231 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVN 290
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 291 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 321
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 109/214 (50%), Gaps = 24/214 (11%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-EH 87
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKD-GEEVPPQRLYNW 354
+ R L+ +N P +VK + +VMEY G +++ L+ G P + +
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-Y 146
Query: 355 ARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAW 414
A QI YLHS +I+RDLK N+LI + +++DFG + ++ + GT +
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEY 204
Query: 415 MAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
+APE+I ++ + +D W+ G++++E+ P+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
+LI + +++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L++ +
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVN 289
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 290 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 320
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 50 KWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQI-EH 108
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV--PPQRLYN 353
+ R L+ +N P +VK + +VMEY G +++ L+ P R Y
Sbjct: 109 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY- 167
Query: 354 WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA 413
A QI YLHS +I+RDLK N+LI + +++DFG + ++ + GT
Sbjct: 168 -AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPE 224
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
++APE+I ++ + +D W+ G++++E+ P+
Sbjct: 225 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
+LI + +++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 193 LLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 250
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L++ +
Sbjct: 251 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVN 310
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 311 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 341
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 30 KWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQI-EH 88
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV--PPQRLYN 353
+ R L+ +N P +VK + +VMEY G +++ L+ P R Y
Sbjct: 89 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY- 147
Query: 354 WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA 413
A QI YLHS +I+RDLK N+LI + +++DFG + ++ + GT
Sbjct: 148 -AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPE 204
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
++APE+I ++ + +D W+ G++++E+ P+
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
+LI + +++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 173 LLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L++ +
Sbjct: 231 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVN 290
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 291 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 321
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 22/200 (11%)
Query: 264 SDLQWLGSGAQGAVFSG--KLRSEIVAVKKVR--------EQKETDIRHLRKLNHPNIVK 313
++L ++G GA G V S + VA+KK+ ++ +I+ L + H NI+
Sbjct: 26 TNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 85
Query: 314 FKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK 368
+ +AP +++ LY LLK + + + + QI G+ Y+HS
Sbjct: 86 INDII-RAPTIEQMKDVYIVQDLMETDLYKLLK-TQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 369 QIIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQ 424
++HRDLK N+L+ + + KI DFG R + ++ + T + APE++ N +
Sbjct: 144 NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 425 CSDK-IDIWSYGIVLWELLT 443
K IDIWS G +L E+L+
Sbjct: 204 GYTKSIDIWSVGCILAEMLS 223
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 109/214 (50%), Gaps = 24/214 (11%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-EH 87
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKD-GEEVPPQRLYNW 354
+ R L+ +N P +VK + +VMEY G +++ L+ G P + +
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-Y 146
Query: 355 ARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAW 414
A QI YLHS +I+RDLK N+LI + +++DFG + ++ + GT +
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEY 204
Query: 415 MAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
+APE+I ++ + +D W+ G++++E+ P+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
+LI + +++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L++ +
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVN 289
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 290 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 320
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 90/196 (45%), Gaps = 14/196 (7%)
Query: 261 ESISDLQWLGSGAQGAVFSGK--LRSEIVAVKKVREQKE-----TDIRH---LRKLNHPN 310
E+ L LG G V+ GK L +VA+K++R + E T IR L+ L H N
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHAN 61
Query: 311 IVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKD-GEEVPPQRLYNWARQIAAGMNYLHSKQ 369
IV + +V EY L L D G + + + Q+ G+ Y H ++
Sbjct: 62 IVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK 120
Query: 370 IIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPE--VIRNEQCSD 427
++HRDLK N+LI + E K++DFG R + + W P ++ + S
Sbjct: 121 VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYST 180
Query: 428 KIDIWSYGIVLWELLT 443
+ID+W G + +E+ T
Sbjct: 181 QIDMWGVGCIFYEMAT 196
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 90/191 (47%), Gaps = 11/191 (5%)
Query: 269 LGSGAQGAVFSGKLRSEI--VAVKKVREQ--KETDIRHLRKLNHPNIVKFKGVCTQAPCY 324
LG G+ G V K + AVKKVR + + ++ L+ P IV G + P
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWV 139
Query: 325 CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGS 384
I ME G L L+K +P R + Q G+ YLH+++I+H D+K+ NVL+ S
Sbjct: 140 NIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSS 199
Query: 385 -KEEAKISDFG--TCREWNNKSTKM----SFAGTVAWMAPEVIRNEQCSDKIDIWSYGIV 437
A + DFG C + + + GT MAPEV+ + C K+DIWS +
Sbjct: 200 DGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCM 259
Query: 438 LWELLTCETPY 448
+ +L P+
Sbjct: 260 MLHMLNGCHPW 270
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 207 GTVAWMAPEVIRNEQCSDKIDIW 229
GT MAPEV+ + C K+DIW
Sbjct: 232 GTETHMAPEVVMGKPCDAKVDIW 254
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + +G+G+ G V ++ K+ + ++V +K++ E
Sbjct: 29 KWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-EH 87
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV--PPQRLYN 353
+ R L+ +N P +VK + +VMEY G +++ L+ P R Y
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFY- 146
Query: 354 WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA 413
A QI YLHS +I+RDLK N+LI + K++DFG + ++ + GT
Sbjct: 147 -AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXL--CGTPE 203
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
++APE+I ++ + +D W+ G++++E+ P+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
+LI + K++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 172 LLIDQQGYIKVADFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L++ +
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVN 289
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 290 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 320
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 100/227 (44%), Gaps = 20/227 (8%)
Query: 243 RIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVRE--QKET 298
R F S + D + +L+ +GSGAQG V + + VA+KK+ Q +T
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 299 DIRH-------LRKLNHPNIVKFKGVCTQAPCY------CIVMEYCAYGPLYNLLKDGEE 345
+ ++ +NH NI+ V T IVME L +++ E
Sbjct: 66 HAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQ--ME 122
Query: 346 VPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTK 405
+ +R+ Q+ G+ +LHS IIHRDLK N+++ S KI DFG R
Sbjct: 123 LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM 182
Query: 406 MSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
+ T + APEVI + +DIWS G ++ E++ + D
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 229
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
Query: 148 YQLELIGGPYWFLAGCTTPDALAESIGLGVLIGSKEEAKISDFGTCREWNNKSTKMSFAG 207
YQ+ L+G + AG D +I ++ S KI DFG R +
Sbjct: 133 YQM-LVGIKHLHSAGIIHRDLKPSNI----VVKSDATLKILDFGLARTAGTSFMMTPYVV 187
Query: 208 TVAWMAPEVIRNEQCSDKIDIW 229
T + APEVI + +DIW
Sbjct: 188 TRYYRAPEVILGMGYKENVDIW 209
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 86/198 (43%), Gaps = 25/198 (12%)
Query: 269 LGSGAQGAVFSGK--LRSEIVAVKKVREQKETD---------------IRHLRKLNHPNI 311
+G GA G V+ + VA+K VR +R L HPN+
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV 76
Query: 312 VKFKGVCTQAPC-----YCIVMEYCAYGPLYNLLKDGEE--VPPQRLYNWARQIAAGMNY 364
V+ VC + +V E+ L L +P + + + RQ G+++
Sbjct: 77 VRLMDVCATSRTDREIKVTLVFEHVDQD-LRTYLDKAPPPGLPAETIKDLMRQFLRGLDF 135
Query: 365 LHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQ 424
LH+ I+HRDLK N+L+ S K++DFG R ++ + T+ + APEV+
Sbjct: 136 LHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQST 195
Query: 425 CSDKIDIWSYGIVLWELL 442
+ +D+WS G + E+
Sbjct: 196 YATPVDMWSVGCIFAEMF 213
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ S K++DFG R ++ + T+ + APEV+ + +D+W
Sbjct: 151 ILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMW 203
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + +G+G+ G V ++ K+ + ++V +K++ E
Sbjct: 29 KWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-EH 87
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV--PPQRLYN 353
+ R L+ +N P +VK + +VMEY G +++ L+ P R Y
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFY- 146
Query: 354 WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA 413
A QI YLHS +I+RDLK N+LI + K++DFG + ++ + GT
Sbjct: 147 -AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXL--CGTPE 203
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
++APE+I ++ + +D W+ G++++E+ P+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
+LI + K++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 172 LLIDQQGYIKVADFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L++ +
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVN 289
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 290 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 320
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 30 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-EH 88
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV--PPQRLYN 353
+ R L+ +N P +VK + +VMEY G +++ L+ P R Y
Sbjct: 89 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY- 147
Query: 354 WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA 413
A QI YLHS +I+RDLK N+LI + +++DFG + ++ + GT
Sbjct: 148 -AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPE 204
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
++APE+I ++ + +D W+ G++++E+ P+
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
+LI + +++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 173 LLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L++ +
Sbjct: 231 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVN 290
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 291 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 321
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-EH 87
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV--PPQRLYN 353
+ R L+ +N P +VK + +VMEY G +++ L+ P R Y
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY- 146
Query: 354 WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA 413
A QI YLHS +I+RDLK N+LI + +++DFG + ++ + GT
Sbjct: 147 -AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPE 203
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
++APE+I ++ + +D W+ G++++E+ P+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
+LI + +++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L++ +
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVN 289
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 290 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 320
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 22/200 (11%)
Query: 264 SDLQWLGSGAQGAVFSG--KLRSEIVAVKKVR--------EQKETDIRHLRKLNHPNIVK 313
++L ++G GA G V S + VA+KK+ ++ +I+ L + H NI+
Sbjct: 26 TNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 85
Query: 314 FKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK 368
+ +AP +++ LY LLK + + + + QI G+ Y+HS
Sbjct: 86 INDI-IRAPTIEQMKDVYIVQDLMETDLYKLLK-TQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 369 QIIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQ 424
++HRDLK N+L+ + + KI DFG R + ++ + T + APE++ N +
Sbjct: 144 NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 425 CSDK-IDIWSYGIVLWELLT 443
K IDIWS G +L E+L+
Sbjct: 204 GYTKSIDIWSVGCILAEMLS 223
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 22/200 (11%)
Query: 264 SDLQWLGSGAQGAVFSG--KLRSEIVAVKKVR--------EQKETDIRHLRKLNHPNIVK 313
++L ++G GA G V S L VA+KK+ ++ +I+ L + H NI+
Sbjct: 24 TNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 83
Query: 314 FKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK 368
+ +AP +++ LY LLK + + + + QI G+ Y+HS
Sbjct: 84 INDI-IRAPTIEQMKDVYIVQDLMETDLYKLLK-TQHLSNDHICYFLYQILRGLKYIHSA 141
Query: 369 QIIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQ 424
++HRDLK N+L+ + + KI DFG R + ++ + T + APE++ N +
Sbjct: 142 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 201
Query: 425 CSDK-IDIWSYGIVLWELLT 443
K IDIWS G +L E+L+
Sbjct: 202 GYTKSIDIWSVGCILAEMLS 221
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-EH 87
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV--PPQRLYN 353
+ R L+ +N P +VK + +VMEY G +++ L+ P R Y
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY- 146
Query: 354 WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA 413
A QI YLHS +I+RDLK N+LI + +++DFG + ++ + GT
Sbjct: 147 -AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPE 203
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
++APE+I ++ + +D W+ G++++E+ P+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 64/151 (42%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
+LI + +++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L+ +
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVN 289
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 290 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 320
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 82/170 (48%), Gaps = 9/170 (5%)
Query: 288 AVKKVREQ--KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE 345
AVKKVR + + ++ L+ P IV G + P I ME G L L+K
Sbjct: 103 AVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGC 162
Query: 346 VPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGS-KEEAKISDFG--TCREWNNK 402
+P R + Q G+ YLH+++I+H D+K+ NVL+ S A + DFG C + +
Sbjct: 163 LPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL 222
Query: 403 STKM----SFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
+ GT MAPEV+ + C K+DIWS ++ +L P+
Sbjct: 223 GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 272
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 207 GTVAWMAPEVIRNEQCSDKIDIW 229
GT MAPEV+ + C K+DIW
Sbjct: 234 GTETHMAPEVVMGKPCDAKVDIW 256
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 22/200 (11%)
Query: 264 SDLQWLGSGAQGAVFSG--KLRSEIVAVKKVR--------EQKETDIRHLRKLNHPNIVK 313
++L ++G GA G V S L VA+KK+ ++ +I+ L + H NI+
Sbjct: 31 TNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 90
Query: 314 FKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK 368
+ +AP +++ LY LLK + + + + QI G+ Y+HS
Sbjct: 91 INDI-IRAPTIEQMKDVYIVQDLMETDLYKLLK-TQHLSNDHICYFLYQILRGLKYIHSA 148
Query: 369 QIIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQ 424
++HRDLK N+L+ + + KI DFG R + ++ + T + APE++ N +
Sbjct: 149 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 208
Query: 425 CSDK-IDIWSYGIVLWELLT 443
K IDIWS G +L E+L+
Sbjct: 209 GYTKSIDIWSVGCILAEMLS 228
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 22/200 (11%)
Query: 264 SDLQWLGSGAQGAVFSG--KLRSEIVAVKKVR--------EQKETDIRHLRKLNHPNIVK 313
++L ++G GA G V S L VA+KK+ ++ +I+ L + H NI+
Sbjct: 32 TNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 91
Query: 314 FKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK 368
+ +AP +++ LY LLK + + + + QI G+ Y+HS
Sbjct: 92 INDI-IRAPTIEQMKDVYIVQDLMETDLYKLLK-TQHLSNDHICYFLYQILRGLKYIHSA 149
Query: 369 QIIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQ 424
++HRDLK N+L+ + + KI DFG R + ++ + T + APE++ N +
Sbjct: 150 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 209
Query: 425 CSDK-IDIWSYGIVLWELLT 443
K IDIWS G +L E+L+
Sbjct: 210 GYTKSIDIWSVGCILAEMLS 229
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 22/200 (11%)
Query: 264 SDLQWLGSGAQGAVFSG--KLRSEIVAVKKVR--------EQKETDIRHLRKLNHPNIVK 313
++L ++G GA G V S L VA+KK+ ++ +I+ L + H NI+
Sbjct: 23 TNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 82
Query: 314 FKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK 368
+ +AP +++ LY LLK + + + + QI G+ Y+HS
Sbjct: 83 INDI-IRAPTIEQMKDVYIVQDLMETDLYKLLK-TQHLSNDHICYFLYQILRGLKYIHSA 140
Query: 369 QIIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQ 424
++HRDLK N+L+ + + KI DFG R + ++ + T + APE++ N +
Sbjct: 141 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 200
Query: 425 CSDK-IDIWSYGIVLWELLT 443
K IDIWS G +L E+L+
Sbjct: 201 GYTKSIDIWSVGCILAEMLS 220
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 22/200 (11%)
Query: 264 SDLQWLGSGAQGAVFSG--KLRSEIVAVKKVR--------EQKETDIRHLRKLNHPNIVK 313
++L ++G GA G V S L VA+KK+ ++ +I+ L + H NI+
Sbjct: 30 TNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 89
Query: 314 FKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK 368
+ +AP +++ LY LLK + + + + QI G+ Y+HS
Sbjct: 90 INDI-IRAPTIEQMKDVYIVQDLMETDLYKLLK-TQHLSNDHICYFLYQILRGLKYIHSA 147
Query: 369 QIIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQ 424
++HRDLK N+L+ + + KI DFG R + ++ + T + APE++ N +
Sbjct: 148 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 425 CSDK-IDIWSYGIVLWELLT 443
K IDIWS G +L E+L+
Sbjct: 208 GYTKSIDIWSVGCILAEMLS 227
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 22/200 (11%)
Query: 264 SDLQWLGSGAQGAVFSG--KLRSEIVAVKKVR--------EQKETDIRHLRKLNHPNIVK 313
++L ++G GA G V S L VA+KK+ ++ +I+ L + H NI+
Sbjct: 24 TNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 83
Query: 314 FKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK 368
+ +AP +++ LY LLK + + + + QI G+ Y+HS
Sbjct: 84 INDI-IRAPTIEQMKDVYIVQDLMETDLYKLLK-TQHLSNDHICYFLYQILRGLKYIHSA 141
Query: 369 QIIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQ 424
++HRDLK N+L+ + + KI DFG R + ++ + T + APE++ N +
Sbjct: 142 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 201
Query: 425 CSDK-IDIWSYGIVLWELLT 443
K IDIWS G +L E+L+
Sbjct: 202 GYTKSIDIWSVGCILAEMLS 221
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-EH 87
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV--PPQRLYN 353
+ R L+ +N P +VK + +VMEY G +++ L+ P R Y
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY- 146
Query: 354 WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA 413
A QI YLHS +I+RDLK N+LI + +++DFG + ++ + GT
Sbjct: 147 -AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPE 203
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
++APE+I ++ + +D W+ G++++E+ P+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
+LI + +++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L++ +
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVN 289
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 290 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 320
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 103/227 (45%), Gaps = 49/227 (21%)
Query: 294 EQKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLY---NLLKDGE------ 344
E+ +T++R ++KL+HPNI + V C+VME C G L N+ D
Sbjct: 73 ERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAM 132
Query: 345 -----EVPP-----------------------QR---LYNWARQIAAGMNYLHSKQIIHR 373
++ P QR + N RQI + ++YLH++ I HR
Sbjct: 133 DVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHR 192
Query: 374 DLKSPNVLIGSKE--EAKISDFGTCREW----NNKSTKMSF-AGTVAWMAPEVIR--NEQ 424
D+K N L + + E K+ DFG +E+ N + M+ AGT ++APEV+ NE
Sbjct: 193 DIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNES 252
Query: 425 CSDKIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPS 471
K D WS G++L LL P+ V+ + I V + L P+
Sbjct: 253 YGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPN 299
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 82/170 (48%), Gaps = 9/170 (5%)
Query: 288 AVKKVREQ--KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEE 345
AVKKVR + + ++ L+ P IV G + P I ME G L L+K
Sbjct: 87 AVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGC 146
Query: 346 VPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGS-KEEAKISDFG--TCREWNNK 402
+P R + Q G+ YLH+++I+H D+K+ NVL+ S A + DFG C + +
Sbjct: 147 LPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL 206
Query: 403 STKM----SFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
+ GT MAPEV+ + C K+DIWS ++ +L P+
Sbjct: 207 GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 256
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 207 GTVAWMAPEVIRNEQCSDKIDIW 229
GT MAPEV+ + C K+DIW
Sbjct: 218 GTETHMAPEVVMGKPCDAKVDIW 240
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 100/227 (44%), Gaps = 20/227 (8%)
Query: 243 RIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVRE--QKET 298
R F S + D + +L+ +GSGAQG V + + VA+KK+ Q +T
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 299 DIRH-------LRKLNHPNIVKFKGVCTQAPCY------CIVMEYCAYGPLYNLLKDGEE 345
+ ++ +NH NI+ V T IVME L +++ E
Sbjct: 66 HAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQ--ME 122
Query: 346 VPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTK 405
+ +R+ Q+ G+ +LHS IIHRDLK N+++ S KI DFG R
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM 182
Query: 406 MSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
+ T + APEVI + +DIWS G ++ E++ + D
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 229
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 23/53 (43%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+++ S KI DFG R + T + APEVI + +DIW
Sbjct: 157 IVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 209
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 22/200 (11%)
Query: 264 SDLQWLGSGAQGAVFSG--KLRSEIVAVKKVR--------EQKETDIRHLRKLNHPNIVK 313
++L ++G GA G V S L VA+KK+ ++ +I+ L + H NI+
Sbjct: 30 TNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 89
Query: 314 FKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK 368
+ +AP +++ LY LLK + + + + QI G+ Y+HS
Sbjct: 90 INDI-IRAPTIEQMKDVYIVQDLMETDLYKLLK-CQHLSNDHICYFLYQILRGLKYIHSA 147
Query: 369 QIIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQ 424
++HRDLK N+L+ + + KI DFG R + ++ + T + APE++ N +
Sbjct: 148 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 425 CSDK-IDIWSYGIVLWELLT 443
K IDIWS G +L E+L+
Sbjct: 208 GYTKSIDIWSVGCILAEMLS 227
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 22/200 (11%)
Query: 264 SDLQWLGSGAQGAVFSG--KLRSEIVAVKKVR--------EQKETDIRHLRKLNHPNIVK 313
++L ++G GA G V S L VA+KK+ ++ +I+ L + H NI+
Sbjct: 30 TNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 89
Query: 314 FKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK 368
+ +AP +++ LY LLK + + + + QI G+ Y+HS
Sbjct: 90 INDI-IRAPTIEQMKDVYIVQDLMETDLYKLLK-TQHLSNDHICYFLYQILRGLKYIHSA 147
Query: 369 QIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSF----AGTVAWMAPEVIRNEQ 424
++HRDLK N+L+ + + KI DFG R + F T + APE++ N +
Sbjct: 148 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSK 207
Query: 425 CSDK-IDIWSYGIVLWELLT 443
K IDIWS G +L E+L+
Sbjct: 208 GYTKSIDIWSVGCILAEMLS 227
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 22/200 (11%)
Query: 264 SDLQWLGSGAQGAVFSG--KLRSEIVAVKKVR--------EQKETDIRHLRKLNHPNIVK 313
++L ++G GA G V S L VA+KK+ ++ +I+ L + H NI+
Sbjct: 31 TNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 90
Query: 314 FKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK 368
+ +AP +++ LY LLK + + + + QI G+ Y+HS
Sbjct: 91 INDI-IRAPTIEQMKDVYIVQDLMETDLYKLLK-TQHLSNDHICYFLYQILRGLKYIHSA 148
Query: 369 QIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSF----AGTVAWMAPEVIRNEQ 424
++HRDLK N+L+ + + KI DFG R + F T + APE++ N +
Sbjct: 149 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSK 208
Query: 425 CSDK-IDIWSYGIVLWELLT 443
K IDIWS G +L E+L+
Sbjct: 209 GYTKSIDIWSVGCILAEMLS 228
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 108/214 (50%), Gaps = 24/214 (11%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 30 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-EH 88
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKD-GEEVPPQRLYNW 354
+ R L+ +N P + K + +VMEY G +++ L+ G P + +
Sbjct: 89 TLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-Y 147
Query: 355 ARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAW 414
A QI YLHS +I+RDLK N++I + K++DFG + ++ + GT +
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL--CGTPEY 205
Query: 415 MAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
+APE+I ++ + +D W+ G++++E+ P+
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
++I + K++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 173 LMIDQQGYIKVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L++ +
Sbjct: 231 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVN 290
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 291 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 321
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEI-EH 87
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV--PPQRLYN 353
+ R L+ +N P +VK + +VMEY G +++ L+ P R Y
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY- 146
Query: 354 WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA 413
A QI YLHS +I+RDLK N++I + +++DFG + ++ + GT
Sbjct: 147 -AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXL--CGTPE 203
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
++APE+I ++ + +D W+ G++++E+ P+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
++I + +++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 172 LMIDQQGYIQVTDFGLAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L++ +
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVN 289
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 290 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 320
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-EH 87
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV--PPQRLYN 353
+ R L+ +N P +VK + +VMEY G +++ L+ P R Y
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY- 146
Query: 354 WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA 413
A QI YLHS +I+RDLK N++I + +++DFG + ++ + GT
Sbjct: 147 -AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPE 203
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
++APE+I ++ + +D W+ G++++E+ P+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 28.9 bits (63), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
++I + +++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 172 LMIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L++ +
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVN 289
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 290 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 320
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 18/213 (8%)
Query: 303 LRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGM 362
LR HPNI+ K V +V E G L + + + + I +
Sbjct: 75 LRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTV 134
Query: 363 NYLHSKQIIHRDLKSPNVLI----GSKEEAKISDFGTCREWNNKSTK-MSFAGTVAWMAP 417
YLHS+ ++HRDLK N+L G+ E +I DFG ++ ++ M+ T ++AP
Sbjct: 135 EYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAP 194
Query: 418 EVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVDSSA---IIWGVGSSSLHL------P 468
EV++ + + DIWS GI+L+ +L TP+ + S I+ +GS L
Sbjct: 195 EVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNT 254
Query: 469 IPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
+ T D L+ KM + P R + KQ+L H
Sbjct: 255 VSETAKD---LVSKMLHVD-PHQRLTAKQVLQH 283
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 17/104 (16%)
Query: 180 GSKEEAKISDFGTCREWNNKSTK-MSFAGTVAWMAPEVIRNEQCSDKIDIWYKNRLCF-- 236
G+ E +I DFG ++ ++ M+ T ++APEV++ + + DIW L +
Sbjct: 159 GNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTM 218
Query: 237 --------------PTSLMARIGEFKSFVLRDEWEIPFESISDL 266
P ++ RIG K + W E+ DL
Sbjct: 219 LAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDL 262
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 107/215 (49%), Gaps = 26/215 (12%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 30 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-EH 88
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV--PPQRLYN 353
+ R L+ +N P + K + +VMEY G +++ L+ P R Y
Sbjct: 89 TLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY- 147
Query: 354 WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA 413
A QI YLHS +I+RDLK N++I + K++DFG + ++ + GT
Sbjct: 148 -AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL--CGTPE 204
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
++APE+I ++ + +D W+ G++++E+ P+
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
++I + K++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 173 LMIDQQGYIKVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L++ +
Sbjct: 231 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVN 290
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 291 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 321
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 100/211 (47%), Gaps = 19/211 (9%)
Query: 264 SDLQWLGSGAQGAVFSG--KLRSEIVAVKKVREQK---------------ETDIRHLRKL 306
S + LGSGA G V++ K +++ V VK ++++K +I L ++
Sbjct: 27 STMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRV 86
Query: 307 NHPNIVKFKGVCTQAPCYCIVMEYCAYG-PLYNLLKDGEEVPPQRLYNWARQIAAGMNYL 365
H NI+K + + +VME G L+ + + RQ+ + + YL
Sbjct: 87 EHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYL 146
Query: 366 HSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIR-NEQ 424
K IIHRD+K N++I K+ DFG+ +F GT+ + APEV+ N
Sbjct: 147 RLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPY 206
Query: 425 CSDKIDIWSYGIVLWELLTCETPYKDVDSSA 455
++++WS G+ L+ L+ E P+ +++ +
Sbjct: 207 RGPELEMWSLGVTLYTLVFEENPFCELEETV 237
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 101/228 (44%), Gaps = 22/228 (9%)
Query: 243 RIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVRE--QKET 298
R F S + D + +L+ +GSGAQG V + + VA+KK+ Q +T
Sbjct: 8 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 67
Query: 299 DIRH-------LRKLNHPNIVKFKGVCTQAPCY------CIVMEYCAYGPLYNLLKDGE- 344
+ ++ +NH NI+ V T IVME NL + +
Sbjct: 68 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA----NLCQVIQM 123
Query: 345 EVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKST 404
E+ +R+ Q+ G+ +LHS IIHRDLK N+++ S KI DFG R
Sbjct: 124 ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 183
Query: 405 KMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
+ F T + APEVI + +DIWS G ++ E++ + D
Sbjct: 184 MVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 231
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 24/53 (45%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+++ S KI DFG R + F T + APEVI + +DIW
Sbjct: 159 IVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGMGYKENVDIW 211
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 107/215 (49%), Gaps = 26/215 (12%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAV-----------FSGKL--RSEIVAVKKVREQ 295
+WE P ++ + L + LG+G+ G V ++ K+ + ++V +K++ E
Sbjct: 30 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-EH 88
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV--PPQRLYN 353
+ R L+ +N P + K + +VMEY G +++ L+ P R Y
Sbjct: 89 TLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY- 147
Query: 354 WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA 413
A QI YLHS +I+RDLK N++I + K++DFG + ++ + GT
Sbjct: 148 -AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL--CGTPE 204
Query: 414 WMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
++APE+I ++ + +D W+ G++++E+ P+
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
++I + K++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 173 LMIDQQGYIKVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L++ +
Sbjct: 231 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVN 290
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 291 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 321
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 22/200 (11%)
Query: 264 SDLQWLGSGAQGAVFSG--KLRSEIVAVKKVR--------EQKETDIRHLRKLNHPNIVK 313
++L ++G GA G V S + VA+KK+ ++ +I+ L H NI+
Sbjct: 28 TNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIG 87
Query: 314 FKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK 368
+ +AP +++ LY LLK + + + + QI G+ Y+HS
Sbjct: 88 INDI-IRAPTIEQMKDVYIVQDLMETDLYKLLK-TQHLSNDHICYFLYQILRGLKYIHSA 145
Query: 369 QIIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQ 424
++HRDLK N+L+ + + KI DFG R + ++ + T + APE++ N +
Sbjct: 146 NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 205
Query: 425 CSDK-IDIWSYGIVLWELLT 443
K IDIWS G +L E+L+
Sbjct: 206 GYTKSIDIWSVGCILAEMLS 225
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 20/215 (9%)
Query: 245 GEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVRE--QKETDI 300
+F S + D + +L+ +GSGAQG V + + VA+KK+ Q +T
Sbjct: 8 NQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA 67
Query: 301 RH-------LRKLNHPNIVKFKGVCTQAPCY------CIVMEYCAYGPLYNLLKDGEEVP 347
+ ++ +NH NI+ V T +VME L +++ E+
Sbjct: 68 KRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQ--MELD 124
Query: 348 PQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMS 407
+R+ Q+ G+ +LHS IIHRDLK N+++ S KI DFG R
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTP 184
Query: 408 FAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELL 442
+ T + APEVI + +DIWS G ++ E++
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 23/54 (42%)
Query: 176 GVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+++ S KI DFG R + T + APEVI + +DIW
Sbjct: 156 NIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 209
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 85/170 (50%), Gaps = 13/170 (7%)
Query: 289 VKKVREQKETDIRHLRKLN-HPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVP 347
V+++RE ++ LRK++ HPNI++ K + +V + G L++ L + +
Sbjct: 63 VQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLS 122
Query: 348 PQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMS 407
+ R + + LH I+HRDLK N+L+ K++DFG + + S
Sbjct: 123 EKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRS 182
Query: 408 FAGTVAWMAPEVIRNEQCS---------DKIDIWSYGIVLWELLTCETPY 448
GT +++APE+I +CS ++D+WS G++++ LL P+
Sbjct: 183 VCGTPSYLAPEII---ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 22/200 (11%)
Query: 264 SDLQWLGSGAQGAVFSG--KLRSEIVAVKKVR--------EQKETDIRHLRKLNHPNIVK 313
++L ++G GA G V S L VA++K+ ++ +I+ L + H NI+
Sbjct: 30 TNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIG 89
Query: 314 FKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK 368
+ +AP +++ LY LLK + + + + QI G+ Y+HS
Sbjct: 90 INDI-IRAPTIEQMKDVYIVQDLMETDLYKLLK-TQHLSNDHICYFLYQILRGLKYIHSA 147
Query: 369 QIIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQ 424
++HRDLK N+L+ + + KI DFG R + ++ + T + APE++ N +
Sbjct: 148 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 425 CSDK-IDIWSYGIVLWELLT 443
K IDIWS G +L E+L+
Sbjct: 208 GYTKSIDIWSVGCILAEMLS 227
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 106/248 (42%), Gaps = 16/248 (6%)
Query: 269 LGSGAQGAV--FSGKLRSEIVAVKKVREQKETDIRHLRK-------LNHPNIVKFKGVCT 319
LG+GA G V + + A K V E+D +RK L HP +V
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 320 QAPCYCIVMEYCAYGPLYNLLKD-GEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSP 378
++ E+ + G L+ + D ++ + RQ+ G+ ++H +H DLK
Sbjct: 119 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPE 178
Query: 379 NVLIGSK--EEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGI 436
N++ +K E K+ DFG + K + GT + APEV + D+WS G+
Sbjct: 179 NIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGV 238
Query: 437 VLWELLTCETPYKDVDSSAIIWGVGSSSLHL---PIPSTCPDGFQLLMKMCWSNAPSSRP 493
+ + LL+ +P+ + + V S ++ DG + K+ ++ P++R
Sbjct: 239 LSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLAD-PNTRM 297
Query: 494 SFKQILSH 501
+ Q L H
Sbjct: 298 TIHQALEH 305
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 100/227 (44%), Gaps = 20/227 (8%)
Query: 243 RIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVRE--QKET 298
R F S + D + +L+ +GSGAQG V + + VA+KK+ Q +T
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 299 DIRH-------LRKLNHPNIVKFKGVCTQAPCY------CIVMEYCAYGPLYNLLKDGEE 345
+ ++ +NH NI+ V T IVME L +++ E
Sbjct: 66 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQ--ME 122
Query: 346 VPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTK 405
+ +R+ Q+ G+ +LHS IIHRDLK N+++ S KI DFG R
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM 182
Query: 406 MSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
+ T + APEVI + +DIWS G ++ E++ + D
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 229
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 23/53 (43%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+++ S KI DFG R + T + APEVI + +DIW
Sbjct: 157 IVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 209
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 20/215 (9%)
Query: 245 GEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVRE--QKETDI 300
+F S + D + +L+ +GSGAQG V + + VA+KK+ Q +T
Sbjct: 8 NQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA 67
Query: 301 RH-------LRKLNHPNIVKFKGVCTQAPCY------CIVMEYCAYGPLYNLLKDGEEVP 347
+ ++ +NH NI+ V T +VME L +++ E+
Sbjct: 68 KRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQ--MELD 124
Query: 348 PQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMS 407
+R+ Q+ G+ +LHS IIHRDLK N+++ S KI DFG R
Sbjct: 125 HERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTP 184
Query: 408 FAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELL 442
+ T + APEVI + +DIWS G ++ E++
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 23/54 (42%)
Query: 176 GVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+++ S KI DFG R + T + APEVI + +DIW
Sbjct: 156 NIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 209
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 18/213 (8%)
Query: 303 LRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGM 362
LR HPNI+ K V +V E G L + + + + I +
Sbjct: 75 LRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTV 134
Query: 363 NYLHSKQIIHRDLKSPNVLI----GSKEEAKISDFGTCREWNNKSTK-MSFAGTVAWMAP 417
YLHS+ ++HRDLK N+L G+ E +I DFG ++ ++ M+ T ++AP
Sbjct: 135 EYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAP 194
Query: 418 EVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVDSSA---IIWGVGSSSLHL------P 468
EV++ + + DIWS GI+L+ +L TP+ + S I+ +GS L
Sbjct: 195 EVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNT 254
Query: 469 IPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
+ T D L+ KM + P R + KQ+L H
Sbjct: 255 VSETAKD---LVSKMLHVD-PHQRLTAKQVLQH 283
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 17/104 (16%)
Query: 180 GSKEEAKISDFGTCREWNNKSTK-MSFAGTVAWMAPEVIRNEQCSDKIDIWYKNRLCF-- 236
G+ E +I DFG ++ ++ M+ T ++APEV++ + + DIW L +
Sbjct: 159 GNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTM 218
Query: 237 --------------PTSLMARIGEFKSFVLRDEWEIPFESISDL 266
P ++ RIG K + W E+ DL
Sbjct: 219 LAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDL 262
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 6/151 (3%)
Query: 303 LRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPL----YNLLKDGEEVPPQRLYNWARQI 358
L K+N +V C+V+ G L Y++ + G P R +A +I
Sbjct: 238 LEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG--FPEARAVFYAAEI 295
Query: 359 AAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPE 418
G+ LH ++I++RDLK N+L+ +ISD G T GTV +MAPE
Sbjct: 296 CCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPE 355
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLTCETPYK 449
V++NE+ + D W+ G +L+E++ ++P++
Sbjct: 356 VVKNERYTFSPDWWALGCLLYEMIAGQSPFQ 386
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ +ISD G T GTV +MAPEV++NE+ + D W
Sbjct: 317 ILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWW 369
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 22/200 (11%)
Query: 264 SDLQWLGSGAQGAVFSG--KLRSEIVAVKKVR--------EQKETDIRHLRKLNHPNIVK 313
++L ++G GA G V S + VA+KK+ ++ +I+ L + H NI+
Sbjct: 34 TNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 93
Query: 314 FKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK 368
+ +AP +++ LY LLK + + + + QI G+ Y+HS
Sbjct: 94 INDI-IRAPTIEQMKDVYIVQDLMETDLYKLLK-TQHLSNDHICYFLYQILRGLKYIHSA 151
Query: 369 QIIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQ 424
++HRDLK N+L+ + + KI DFG R + ++ + T + APE++ N +
Sbjct: 152 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 211
Query: 425 CSDK-IDIWSYGIVLWELLT 443
K IDIWS G +L E+L+
Sbjct: 212 GYTKSIDIWSVGCILAEMLS 231
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 22/200 (11%)
Query: 264 SDLQWLGSGAQGAVFSG--KLRSEIVAVKKVR--------EQKETDIRHLRKLNHPNIVK 313
++L ++G GA G V S + VA+KK+ ++ +I+ L + H NI+
Sbjct: 26 TNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 85
Query: 314 FKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK 368
+ +AP +++ LY LLK + + + + QI G+ Y+HS
Sbjct: 86 INDI-IRAPTIEQMKDVYIVQDLMETDLYKLLK-TQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 369 QIIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQ 424
++HRDLK N+L+ + + KI DFG R + ++ + T + APE++ N +
Sbjct: 144 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 425 CSDK-IDIWSYGIVLWELLT 443
K IDIWS G +L E+L+
Sbjct: 204 GYTKSIDIWSVGCILAEMLS 223
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 22/200 (11%)
Query: 264 SDLQWLGSGAQGAVFSG--KLRSEIVAVKKVR--------EQKETDIRHLRKLNHPNIVK 313
++L ++G GA G V S + VA+KK+ ++ +I+ L + H NI+
Sbjct: 26 TNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 85
Query: 314 FKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK 368
+ +AP +++ LY LLK + + + + QI G+ Y+HS
Sbjct: 86 INDI-IRAPTIEQMKDVYIVQDLMETDLYKLLK-TQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 369 QIIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQ 424
++HRDLK N+L+ + + KI DFG R + ++ + T + APE++ N +
Sbjct: 144 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 425 CSDK-IDIWSYGIVLWELLT 443
K IDIWS G +L E+L+
Sbjct: 204 GYTKSIDIWSVGCILAEMLS 223
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 22/200 (11%)
Query: 264 SDLQWLGSGAQGAVFSG--KLRSEIVAVKKVR--------EQKETDIRHLRKLNHPNIVK 313
++L ++G GA G V S + VA+KK+ ++ +I+ L + H NI+
Sbjct: 28 TNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 87
Query: 314 FKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK 368
+ +AP +++ LY LLK + + + + QI G+ Y+HS
Sbjct: 88 INDI-IRAPTIEQMKDVYIVQDLMETDLYKLLK-TQHLSNDHICYFLYQILRGLKYIHSA 145
Query: 369 QIIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQ 424
++HRDLK N+L+ + + KI DFG R + ++ + T + APE++ N +
Sbjct: 146 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 205
Query: 425 CSDK-IDIWSYGIVLWELLT 443
K IDIWS G +L E+L+
Sbjct: 206 GYTKSIDIWSVGCILAEMLS 225
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 29/217 (13%)
Query: 249 SFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKLR--SEIVAVKK-------VREQKET- 298
+F + DE+EI ++ +G+GA G V S + R + VA+KK V K T
Sbjct: 49 TFDVGDEYEI-------IETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTL 101
Query: 299 -DIRHLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLY 352
+++ L+ H NI+ K + Y V+ L+ ++ + + + +
Sbjct: 102 RELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVR 161
Query: 353 NWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTK-----MS 407
+ Q+ G+ Y+HS Q+IHRDLK N+L+ E KI DFG R +
Sbjct: 162 YFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTE 221
Query: 408 FAGTVAWMAPEVIRN-EQCSDKIDIWSYGIVLWELLT 443
+ T + APE++ + + + ID+WS G + E+L
Sbjct: 222 YVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 258
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 15/204 (7%)
Query: 309 PNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLL--KDGEEVPPQRLYNWARQIAAGMNYLH 366
P ++ V +++EY A G +++L + E V + +QI G+ YLH
Sbjct: 89 PRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH 148
Query: 367 SKQIIHRDLKSPNVLIGS---KEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNE 423
I+H DLK N+L+ S + KI DFG R+ + GT ++APE++ +
Sbjct: 149 QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYD 208
Query: 424 QCSDKIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVG------SSSLHLPIPSTCPDGF 477
+ D+W+ GI+ + LLT +P+ D+ + S + D
Sbjct: 209 PITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFI 268
Query: 478 QLLMKMCWSNAPSSRPSFKQILSH 501
Q L+ P RP+ + LSH
Sbjct: 269 QSLL----VKNPEKRPTAEICLSH 288
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 184 EAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+ KI DFG R+ + GT ++APE++ + + D+W
Sbjct: 172 DIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMW 217
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 22/200 (11%)
Query: 264 SDLQWLGSGAQGAVFSG--KLRSEIVAVKKVR--------EQKETDIRHLRKLNHPNIVK 313
++L ++G GA G V S + VA+KK+ ++ +I+ L + H NI+
Sbjct: 46 TNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 105
Query: 314 FKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK 368
+ +AP +++ LY LLK + + + + QI G+ Y+HS
Sbjct: 106 INDI-IRAPTIEQMKDVYIVQDLMETDLYKLLK-TQHLSNDHICYFLYQILRGLKYIHSA 163
Query: 369 QIIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQ 424
++HRDLK N+L+ + + KI DFG R + ++ + T + APE++ N +
Sbjct: 164 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 223
Query: 425 CSDK-IDIWSYGIVLWELLT 443
K IDIWS G +L E+L+
Sbjct: 224 GYTKSIDIWSVGCILAEMLS 243
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 6/151 (3%)
Query: 303 LRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPL----YNLLKDGEEVPPQRLYNWARQI 358
L K+N +V C+V+ G L Y++ + G P R +A +I
Sbjct: 238 LEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG--FPEARAVFYAAEI 295
Query: 359 AAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPE 418
G+ LH ++I++RDLK N+L+ +ISD G T GTV +MAPE
Sbjct: 296 CCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPE 355
Query: 419 VIRNEQCSDKIDIWSYGIVLWELLTCETPYK 449
V++NE+ + D W+ G +L+E++ ++P++
Sbjct: 356 VVKNERYTFSPDWWALGCLLYEMIAGQSPFQ 386
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+L+ +ISD G T GTV +MAPEV++NE+ + D W
Sbjct: 317 ILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWW 369
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 29/217 (13%)
Query: 249 SFVLRDEWEIPFESISDLQWLGSGAQGAVFSGKLR--SEIVAVKK-------VREQKET- 298
+F + DE+EI ++ +G+GA G V S + R + VA+KK V K T
Sbjct: 50 TFDVGDEYEI-------IETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTL 102
Query: 299 -DIRHLRKLNHPNIVKFKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLY 352
+++ L+ H NI+ K + Y V+ L+ ++ + + + +
Sbjct: 103 RELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVR 162
Query: 353 NWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTK-----MS 407
+ Q+ G+ Y+HS Q+IHRDLK N+L+ E KI DFG R +
Sbjct: 163 YFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTE 222
Query: 408 FAGTVAWMAPEVIRN-EQCSDKIDIWSYGIVLWELLT 443
+ T + APE++ + + + ID+WS G + E+L
Sbjct: 223 YVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 259
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 20/215 (9%)
Query: 245 GEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVRE--QKETDI 300
+F S + D + +L+ +GSGAQG V + + VA+KK+ Q +T
Sbjct: 8 NQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA 67
Query: 301 RH-------LRKLNHPNIVKFKGVCTQAPCY------CIVMEYCAYGPLYNLLKDGEEVP 347
+ ++ +NH NI+ V T +VME L +++ E+
Sbjct: 68 KRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQ--MELD 124
Query: 348 PQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMS 407
+R+ Q+ G+ +LHS IIHRDLK N+++ S KI DFG R
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTP 184
Query: 408 FAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELL 442
+ T + APEVI + +DIWS G ++ E++
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 23/54 (42%)
Query: 176 GVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+++ S KI DFG R + T + APEVI + +DIW
Sbjct: 156 NIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 209
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 5/157 (3%)
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWA 355
+E D+ + +L+HP VK + Y G L ++ +
Sbjct: 81 RERDV--MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYT 138
Query: 356 RQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTV 412
+I + + YLH K IIHRDLK N+L+ +I+DFGT + + +S + SF GT
Sbjct: 139 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTA 198
Query: 413 AWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYK 449
+++PE++ + S D+W+ G ++++L+ P++
Sbjct: 199 QYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFR 235
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+ +I+DFGT + + +S + SF GT +++PE++ + S D+W
Sbjct: 163 ILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALG- 221
Query: 234 LCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQW 268
C L+A + F++ +E+ I F+ I L++
Sbjct: 222 -CIIYQLVAGLPPFRA---GNEYLI-FQKIIKLEY 251
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 106/248 (42%), Gaps = 16/248 (6%)
Query: 269 LGSGAQGAV--FSGKLRSEIVAVKKVREQKETDIRHLRK-------LNHPNIVKFKGVCT 319
LG+GA G V + + A K V E+D +RK L HP +V
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 320 QAPCYCIVMEYCAYGPLYNLLKD-GEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSP 378
++ E+ + G L+ + D ++ + RQ+ G+ ++H +H DLK
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPE 284
Query: 379 NVLIGSK--EEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGI 436
N++ +K E K+ DFG + K + GT + APEV + D+WS G+
Sbjct: 285 NIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGV 344
Query: 437 VLWELLTCETPYKDVDSSAIIWGVGSSSLHL---PIPSTCPDGFQLLMKMCWSNAPSSRP 493
+ + LL+ +P+ + + V S ++ DG + K+ ++ P++R
Sbjct: 345 LSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLAD-PNTRM 403
Query: 494 SFKQILSH 501
+ Q L H
Sbjct: 404 TIHQALEH 411
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 20/215 (9%)
Query: 245 GEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVRE--QKETDI 300
+F S + D + +L+ +GSGAQG V + + VA+KK+ Q +T
Sbjct: 8 NQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA 67
Query: 301 RH-------LRKLNHPNIVKFKGVCTQAPCY------CIVMEYCAYGPLYNLLKDGEEVP 347
+ ++ +NH NI+ V T +VME L +++ E+
Sbjct: 68 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQ--MELD 124
Query: 348 PQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMS 407
+R+ Q+ G+ +LHS IIHRDLK N+++ S KI DFG R
Sbjct: 125 HERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTP 184
Query: 408 FAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELL 442
+ T + APEVI + +DIWS G ++ E++
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 23/54 (42%)
Query: 176 GVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+++ S KI DFG R + T + APEVI + +DIW
Sbjct: 156 NIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 209
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 20/215 (9%)
Query: 245 GEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVRE--QKETDI 300
+F S + D + +L+ +GSGAQG V + + VA+KK+ Q +T
Sbjct: 1 NQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA 60
Query: 301 RH-------LRKLNHPNIVKFKGVCTQAPCY------CIVMEYCAYGPLYNLLKDGEEVP 347
+ ++ +NH NI+ V T +VME L +++ E+
Sbjct: 61 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQ--MELD 117
Query: 348 PQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMS 407
+R+ Q+ G+ +LHS IIHRDLK N+++ S KI DFG R
Sbjct: 118 HERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTP 177
Query: 408 FAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELL 442
+ T + APEVI + +DIWS G ++ E++
Sbjct: 178 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 23/54 (42%)
Query: 176 GVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+++ S KI DFG R + T + APEVI + +DIW
Sbjct: 149 NIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 202
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 100/225 (44%), Gaps = 20/225 (8%)
Query: 245 GEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVRE--QKETDI 300
+F S + D + L+ +GSGAQG V + + VAVKK+ Q +T
Sbjct: 6 SQFYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHA 65
Query: 301 RH-------LRKLNHPNIVKFKGVCTQAPCY------CIVMEYCAYGPLYNLLKDGEEVP 347
+ L+ +NH NI+ V T +VME L ++ E+
Sbjct: 66 KRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIH--MELD 122
Query: 348 PQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMS 407
+R+ Q+ G+ +LHS IIHRDLK N+++ S KI DFG R +
Sbjct: 123 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTP 182
Query: 408 FAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
+ T + APEVI + +DIWS G ++ EL+ ++ D
Sbjct: 183 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTD 227
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 24/54 (44%)
Query: 176 GVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+++ S KI DFG R + + T + APEVI + +DIW
Sbjct: 154 NIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIW 207
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 16/197 (8%)
Query: 262 SISDLQWLGSGAQGAVFSGKL--RSEIVAVKKVREQKETDIRHL---RKLNHPNIVKFK- 315
S +D + +G+G+ G V+ KL E+VA+KKV + K R L RKL+H NIV+ +
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 316 -----GVCTQAPCYCIVMEYC---AYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHS 367
G +V++Y Y + + + +P + + Q+ + Y+HS
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 368 KQIIHRDLKSPNVLIGSKEEA-KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRN-EQC 425
I HRD+K N+L+ K+ DFG+ ++ +S+ + + APE+I
Sbjct: 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDY 200
Query: 426 SDKIDIWSYGIVLWELL 442
+ ID+WS G VL ELL
Sbjct: 201 TSSIDVWSAGCVLAELL 217
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 104/214 (48%), Gaps = 24/214 (11%)
Query: 255 EWEIPFESISDL------QWLGSGAQGAVFSGKLR--SEIVAVKKVREQKETDIRHL--- 303
+WE P ++ + L + LG+G+ G V K + A+K + +QK ++ +
Sbjct: 30 KWESPAQNTAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT 89
Query: 304 -------RKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV--PPQRLYNW 354
+ +N P +VK + +V+EY G +++ L+ P R Y
Sbjct: 90 LNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFY-- 147
Query: 355 ARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAW 414
A QI YLHS +I+RDLK N+LI + K++DFG + ++ + GT +
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXL--CGTPEY 205
Query: 415 MAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
+APE+I ++ + +D W+ G++++E+ P+
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW------Y 230
+LI + K++DFG + ++ + GT ++APE+I ++ + +D W Y
Sbjct: 173 LLIDQQGYIKVADFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 231 KNRLCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFS---GKLRSEIV 287
+ +P + + ++ + P SDL+ L + G L++ +
Sbjct: 231 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVN 290
Query: 288 AVKKVREQKETD--IRHLRKLNHPNIVKFKG 316
+K + TD + RK+ P I KFKG
Sbjct: 291 DIKNHKWFATTDWIAIYQRKVEAPFIPKFKG 321
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 100/227 (44%), Gaps = 20/227 (8%)
Query: 243 RIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVRE--QKET 298
R F S + D + +L+ +GSGAQG V + + VA+KK+ Q +T
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 299 DIRH-------LRKLNHPNIVKFKGVCTQAPCY------CIVMEYCAYGPLYNLLKDGEE 345
+ ++ +NH NI+ V T IVME L +++ E
Sbjct: 66 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQ--ME 122
Query: 346 VPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTK 405
+ +R+ Q+ G+ +LHS IIHRDLK N+++ S KI DFG R
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 182
Query: 406 MSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVD 452
+ T + APEVI + +DIWS G ++ E++ + D
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 229
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 23/53 (43%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+++ S KI DFG R + T + APEVI + +DIW
Sbjct: 157 IVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 209
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 22/200 (11%)
Query: 264 SDLQWLGSGAQGAVFSG--KLRSEIVAVKKVR--------EQKETDIRHLRKLNHPNIVK 313
++L ++G GA G V S + VA+KK+ ++ +I+ L H NI+
Sbjct: 28 TNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIG 87
Query: 314 FKGVCTQAPCY-----CIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK 368
+ +AP +++ LY LLK + + + + QI G+ Y+HS
Sbjct: 88 INDI-IRAPTIEQMKDVYIVQDLMETDLYKLLK-TQHLSNDHICYFLYQILRGLKYIHSA 145
Query: 369 QIIHRDLKSPNVLIGSKEEAKISDFGTCR----EWNNKSTKMSFAGTVAWMAPEVIRNEQ 424
++HRDLK N+L+ + + KI DFG R + ++ + T + APE++ N +
Sbjct: 146 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 205
Query: 425 CSDK-IDIWSYGIVLWELLT 443
K IDIWS G +L E+L+
Sbjct: 206 GYTKSIDIWSVGCILAEMLS 225
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 16/197 (8%)
Query: 262 SISDLQWLGSGAQGAVFSGKL--RSEIVAVKKVREQKETDIRHL---RKLNHPNIVKFK- 315
S +D + +G+G+ G V+ KL E+VA+KKV + K R L RKL+H NIV+ +
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 93
Query: 316 -----GVCTQAPCYCIVMEYC---AYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHS 367
G +V++Y Y + + + +P + + Q+ + Y+HS
Sbjct: 94 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 153
Query: 368 KQIIHRDLKSPNVLIGSKEEA-KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRN-EQC 425
I HRD+K N+L+ K+ DFG+ ++ +S+ + + APE+I
Sbjct: 154 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDY 213
Query: 426 SDKIDIWSYGIVLWELL 442
+ ID+WS G VL ELL
Sbjct: 214 TSSIDVWSAGCVLAELL 230
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 84/170 (49%), Gaps = 13/170 (7%)
Query: 289 VKKVREQKETDIRHLRKLN-HPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVP 347
V+++RE ++ LRK++ HPNI++ K + +V + G L++ L + +
Sbjct: 63 VQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLS 122
Query: 348 PQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMS 407
+ R + + LH I+HRDLK N+L+ K++DFG + +
Sbjct: 123 EKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE 182
Query: 408 FAGTVAWMAPEVIRNEQCS---------DKIDIWSYGIVLWELLTCETPY 448
GT +++APE+I +CS ++D+WS G++++ LL P+
Sbjct: 183 VCGTPSYLAPEII---ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 20/217 (9%)
Query: 243 RIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVRE--QKET 298
R F S + D + +L+ +GSGAQG V + + VA+KK+ Q +T
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 299 DIRH-------LRKLNHPNIVKFKGVCTQAPCY------CIVMEYCAYGPLYNLLKDGEE 345
+ ++ +NH NI+ V T IVME L +++ E
Sbjct: 66 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQ--ME 122
Query: 346 VPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTK 405
+ +R+ Q+ G+ +LHS IIHRDLK N+++ S KI DFG R
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 182
Query: 406 MSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELL 442
+ T + APEVI + +DIWS G ++ E++
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 23/53 (43%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+++ S KI DFG R + T + APEVI + +DIW
Sbjct: 157 IVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 209
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 16/197 (8%)
Query: 262 SISDLQWLGSGAQGAVFSGKL--RSEIVAVKKVREQKETDIRHL---RKLNHPNIVKFK- 315
S +D + +G+G+ G V+ KL E+VA+KKV + K R L RKL+H NIV+ +
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 108
Query: 316 -----GVCTQAPCYCIVMEYC---AYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHS 367
G +V++Y Y + + + +P + + Q+ + Y+HS
Sbjct: 109 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 168
Query: 368 KQIIHRDLKSPNVLIGSKEEA-KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRN-EQC 425
I HRD+K N+L+ K+ DFG+ ++ +S+ + + APE+I
Sbjct: 169 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDY 228
Query: 426 SDKIDIWSYGIVLWELL 442
+ ID+WS G VL ELL
Sbjct: 229 TSSIDVWSAGCVLAELL 245
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 20/217 (9%)
Query: 243 RIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVRE--QKET 298
R F S + D + +L+ +GSGAQG V + + VA+KK+ Q +T
Sbjct: 7 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 66
Query: 299 DIRH-------LRKLNHPNIVKFKGVCTQAPCY------CIVMEYCAYGPLYNLLKDGEE 345
+ ++ +NH NI+ V T IVME L +++ E
Sbjct: 67 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQ--ME 123
Query: 346 VPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTK 405
+ +R+ Q+ G+ +LHS IIHRDLK N+++ S KI DFG R
Sbjct: 124 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 183
Query: 406 MSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELL 442
+ T + APEVI + +DIWS G ++ E++
Sbjct: 184 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 220
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 23/53 (43%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+++ S KI DFG R + T + APEVI + +DIW
Sbjct: 158 IVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 210
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 20/217 (9%)
Query: 243 RIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVRE--QKET 298
R F S + D + +L+ +GSGAQG V + + VA+KK+ Q +T
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 299 DIRH-------LRKLNHPNIVKFKGVCTQAPCY------CIVMEYCAYGPLYNLLKDGEE 345
+ ++ +NH NI+ V T IVME L +++ E
Sbjct: 66 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQ--ME 122
Query: 346 VPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTK 405
+ +R+ Q+ G+ +LHS IIHRDLK N+++ S KI DFG R
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 182
Query: 406 MSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELL 442
+ T + APEVI + +DIWS G ++ E++
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 23/53 (43%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+++ S KI DFG R + T + APEVI + +DIW
Sbjct: 157 IVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 209
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 16/197 (8%)
Query: 262 SISDLQWLGSGAQGAVFSGKL--RSEIVAVKKVREQKETDIRHL---RKLNHPNIVKFK- 315
S +D + +G+G+ G V+ KL E+VA+KKV + K R L RKL+H NIV+ +
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 114
Query: 316 -----GVCTQAPCYCIVMEYC---AYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHS 367
G +V++Y Y + + + +P + + Q+ + Y+HS
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 174
Query: 368 KQIIHRDLKSPNVLIGSKEEA-KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNE-QC 425
I HRD+K N+L+ K+ DFG+ ++ +S+ + + APE+I
Sbjct: 175 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDY 234
Query: 426 SDKIDIWSYGIVLWELL 442
+ ID+WS G VL ELL
Sbjct: 235 TSSIDVWSAGCVLAELL 251
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 16/197 (8%)
Query: 262 SISDLQWLGSGAQGAVFSGKL--RSEIVAVKKVREQKETDIRHL---RKLNHPNIVKFK- 315
S +D + +G+G+ G V+ KL E+VA+KKV + K R L RKL+H NIV+ +
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 85
Query: 316 -----GVCTQAPCYCIVMEYC---AYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHS 367
G +V++Y Y + + + +P + + Q+ + Y+HS
Sbjct: 86 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 145
Query: 368 KQIIHRDLKSPNVLIGSKEEA-KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRN-EQC 425
I HRD+K N+L+ K+ DFG+ ++ +S+ + + APE+I
Sbjct: 146 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDY 205
Query: 426 SDKIDIWSYGIVLWELL 442
+ ID+WS G VL ELL
Sbjct: 206 TSSIDVWSAGCVLAELL 222
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 84/170 (49%), Gaps = 13/170 (7%)
Query: 289 VKKVREQKETDIRHLRKLN-HPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVP 347
V+++RE ++ LRK++ HPNI++ K + +V + G L++ L + +
Sbjct: 50 VQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLS 109
Query: 348 PQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMS 407
+ R + + LH I+HRDLK N+L+ K++DFG + +
Sbjct: 110 EKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE 169
Query: 408 FAGTVAWMAPEVIRNEQCS---------DKIDIWSYGIVLWELLTCETPY 448
GT +++APE+I +CS ++D+WS G++++ LL P+
Sbjct: 170 VCGTPSYLAPEII---ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 16/197 (8%)
Query: 262 SISDLQWLGSGAQGAVFSGKL--RSEIVAVKKVREQKETDIRHL---RKLNHPNIVKFK- 315
S +D + +G+G+ G V+ KL E+VA+KKV + K R L RKL+H NIV+ +
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 159
Query: 316 -----GVCTQAPCYCIVMEYC---AYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHS 367
G +V++Y Y + + + +P + + Q+ + Y+HS
Sbjct: 160 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 219
Query: 368 KQIIHRDLKSPNVLIGSKEEA-KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRN-EQC 425
I HRD+K N+L+ K+ DFG+ ++ +S+ + + APE+I
Sbjct: 220 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDY 279
Query: 426 SDKIDIWSYGIVLWELL 442
+ ID+WS G VL ELL
Sbjct: 280 TSSIDVWSAGCVLAELL 296
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 16/197 (8%)
Query: 262 SISDLQWLGSGAQGAVFSGKL--RSEIVAVKKVREQKETDIRHL---RKLNHPNIVKFK- 315
S +D + +G+G+ G V+ KL E+VA+KKV + K R L RKL+H NIV+ +
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 116
Query: 316 -----GVCTQAPCYCIVMEYC---AYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHS 367
G +V++Y Y + + + +P + + Q+ + Y+HS
Sbjct: 117 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 176
Query: 368 KQIIHRDLKSPNVLIGSKEEA-KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNE-QC 425
I HRD+K N+L+ K+ DFG+ ++ +S+ + + APE+I
Sbjct: 177 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDY 236
Query: 426 SDKIDIWSYGIVLWELL 442
+ ID+WS G VL ELL
Sbjct: 237 TSSIDVWSAGCVLAELL 253
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 5/157 (3%)
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWA 355
+E D+ + +L+HP VK + Y G L ++ +
Sbjct: 78 RERDV--MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 135
Query: 356 RQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTV 412
+I + + YLH K IIHRDLK N+L+ +I+DFGT + + +S + SF GT
Sbjct: 136 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTA 195
Query: 413 AWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYK 449
+++PE++ + D+W+ G ++++L+ P++
Sbjct: 196 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 232
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+ +I+DFGT + + +S + SF GT +++PE++ + D+W
Sbjct: 160 ILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALG- 218
Query: 234 LCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQW 268
C L+A + F++ +E+ I F+ I L++
Sbjct: 219 -CIIYQLVAGLPPFRA---GNEYLI-FQKIIKLEY 248
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 16/197 (8%)
Query: 262 SISDLQWLGSGAQGAVFSGKL--RSEIVAVKKVREQKETDIRHL---RKLNHPNIVKFK- 315
S +D + +G+G+ G V+ KL E+VA+KKV + K R L RKL+H NIV+ +
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRY 80
Query: 316 -----GVCTQAPCYCIVMEYC---AYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHS 367
G +V++Y Y + + + +P + + Q+ + Y+HS
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 368 KQIIHRDLKSPNVLIGSKEEA-KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRN-EQC 425
I HRD+K N+L+ K+ DFG+ ++ +S+ + + APE+I
Sbjct: 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDY 200
Query: 426 SDKIDIWSYGIVLWELL 442
+ ID+WS G VL ELL
Sbjct: 201 TSSIDVWSAGCVLAELL 217
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 5/157 (3%)
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWA 355
+E D+ + +L+HP VK + Y G L ++ +
Sbjct: 82 RERDV--MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 139
Query: 356 RQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTV 412
+I + + YLH K IIHRDLK N+L+ +I+DFGT + + +S + SF GT
Sbjct: 140 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTA 199
Query: 413 AWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYK 449
+++PE++ + D+W+ G ++++L+ P++
Sbjct: 200 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 236
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+ +I+DFGT + + +S + SF GT +++PE++ + D+W
Sbjct: 164 ILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALG- 222
Query: 234 LCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQW 268
C L+A + F++ +E+ I F+ I L++
Sbjct: 223 -CIIYQLVAGLPPFRA---GNEYLI-FQKIIKLEY 252
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 16/197 (8%)
Query: 262 SISDLQWLGSGAQGAVFSGKL--RSEIVAVKKVREQKETDIRHL---RKLNHPNIVKFK- 315
S +D + +G+G+ G V+ KL E+VA+KKV + K R L RKL+H NIV+ +
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRY 80
Query: 316 -----GVCTQAPCYCIVMEYC---AYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHS 367
G +V++Y Y + + + +P + + Q+ + Y+HS
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 368 KQIIHRDLKSPNVLIGSKEEA-KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRN-EQC 425
I HRD+K N+L+ K+ DFG+ ++ +S+ + + APE+I
Sbjct: 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDY 200
Query: 426 SDKIDIWSYGIVLWELL 442
+ ID+WS G VL ELL
Sbjct: 201 TSSIDVWSAGCVLAELL 217
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 16/197 (8%)
Query: 262 SISDLQWLGSGAQGAVFSGKL--RSEIVAVKKVREQKETDIRHL---RKLNHPNIVKFK- 315
S +D + +G+G+ G V+ KL E+VA+KKV + K R L RKL+H NIV+ +
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 118
Query: 316 -----GVCTQAPCYCIVMEYC---AYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHS 367
G +V++Y Y + + + +P + + Q+ + Y+HS
Sbjct: 119 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 178
Query: 368 KQIIHRDLKSPNVLIGSKEEA-KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRN-EQC 425
I HRD+K N+L+ K+ DFG+ ++ +S+ + + APE+I
Sbjct: 179 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDY 238
Query: 426 SDKIDIWSYGIVLWELL 442
+ ID+WS G VL ELL
Sbjct: 239 TSSIDVWSAGCVLAELL 255
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 97/196 (49%), Gaps = 12/196 (6%)
Query: 262 SISDLQWLGSGAQGAVFSGKLRSEIVAVKKVREQ---KETDIRHLRKLNHPNIVKFKGVC 318
+ ++Q + + V++ KL S+ +K+ +E DI N P +V+
Sbjct: 86 AFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA--NSPWVVQLFYAF 143
Query: 319 TQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSP 378
+VMEY G L NL+ + +VP + + ++ ++ +HS IHRD+K
Sbjct: 144 QDDRYLYMVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPD 202
Query: 379 NVLIGSKEEAKISDFGTCREWNNKSTKM--SFAGTVAWMAPEVIRNEQCSD----KIDIW 432
N+L+ K++DFGTC + N + + GT +++PEV++++ + D W
Sbjct: 203 NMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWW 262
Query: 433 SYGIVLWELLTCETPY 448
S G+ L+E+L +TP+
Sbjct: 263 SVGVFLYEMLVGDTPF 278
Score = 28.9 bits (63), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKM--SFAGTVAWMAPEVIRNE 220
+L+ K++DFGTC + N + + GT +++PEV++++
Sbjct: 204 MLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQ 249
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 97/196 (49%), Gaps = 12/196 (6%)
Query: 262 SISDLQWLGSGAQGAVFSGKLRSEIVAVKKVREQ---KETDIRHLRKLNHPNIVKFKGVC 318
+ ++Q + + V++ KL S+ +K+ +E DI N P +V+
Sbjct: 86 AFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA--NSPWVVQLFYAF 143
Query: 319 TQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSP 378
+VMEY G L NL+ + +VP + + ++ ++ +HS IHRD+K
Sbjct: 144 QDDRYLYMVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPD 202
Query: 379 NVLIGSKEEAKISDFGTCREWNNKSTKM--SFAGTVAWMAPEVIRNEQCSD----KIDIW 432
N+L+ K++DFGTC + N + + GT +++PEV++++ + D W
Sbjct: 203 NMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWW 262
Query: 433 SYGIVLWELLTCETPY 448
S G+ L+E+L +TP+
Sbjct: 263 SVGVFLYEMLVGDTPF 278
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKM--SFAGTVAWMAPEVIRNE 220
+L+ K++DFGTC + N + + GT +++PEV++++
Sbjct: 204 MLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQ 249
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 97/196 (49%), Gaps = 12/196 (6%)
Query: 262 SISDLQWLGSGAQGAVFSGKLRSEIVAVKKVREQ---KETDIRHLRKLNHPNIVKFKGVC 318
+ ++Q + + V++ KL S+ +K+ +E DI N P +V+
Sbjct: 81 AFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF--ANSPWVVQLFYAF 138
Query: 319 TQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSP 378
+VMEY G L NL+ + +VP + + ++ ++ +HS IHRD+K
Sbjct: 139 QDDRYLYMVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPD 197
Query: 379 NVLIGSKEEAKISDFGTCREWNNKSTKM--SFAGTVAWMAPEVIRNEQCSD----KIDIW 432
N+L+ K++DFGTC + N + + GT +++PEV++++ + D W
Sbjct: 198 NMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWW 257
Query: 433 SYGIVLWELLTCETPY 448
S G+ L+E+L +TP+
Sbjct: 258 SVGVFLYEMLVGDTPF 273
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKM--SFAGTVAWMAPEVIRNE 220
+L+ K++DFGTC + N + + GT +++PEV++++
Sbjct: 199 MLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQ 244
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 98/217 (45%), Gaps = 20/217 (9%)
Query: 243 RIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVRE--QKET 298
R F S + D + +L+ +GSGAQG V + + VA+KK+ Q +T
Sbjct: 11 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 70
Query: 299 DIRH-------LRKLNHPNIVKFKGVCTQAPCY------CIVMEYCAYGPLYNLLKDGEE 345
+ ++ +NH NI+ V T IVME L +++ E
Sbjct: 71 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQ--ME 127
Query: 346 VPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTK 405
+ +R+ Q+ G+ +LHS IIHRDLK N+++ S KI DFG R
Sbjct: 128 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 187
Query: 406 MSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELL 442
+ T + APEVI + +D+WS G ++ E++
Sbjct: 188 TPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMV 224
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 20/215 (9%)
Query: 245 GEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVRE--QKETDI 300
+F S + D + +L+ +GSGAQG V + + VA+KK+ Q +T
Sbjct: 46 NQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA 105
Query: 301 RH-------LRKLNHPNIVKFKGVCTQAPCY------CIVMEYCAYGPLYNLLKDGEEVP 347
+ ++ +NH NI+ V T +VME L +++ E+
Sbjct: 106 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQ--MELD 162
Query: 348 PQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMS 407
+R+ Q+ G+ +LHS IIHRDLK N+++ S KI DFG R
Sbjct: 163 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP 222
Query: 408 FAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELL 442
+ T + APEVI + +DIWS G ++ E++
Sbjct: 223 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 23/54 (42%)
Query: 176 GVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+++ S KI DFG R + T + APEVI + +DIW
Sbjct: 194 NIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 247
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 262 SISDLQWLGSGAQGAVFSGKL--RSEIVAVKKVREQKETDIRHL---RKLNHPNIVKFK- 315
S +D + +G+G+ G V+ KL E+VA+KKV + K R L RKL+H NIV+ +
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 316 -----GVCTQAPCYCIVMEYC---AYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHS 367
G +V++Y Y + + + +P + + Q+ + Y+HS
Sbjct: 81 FFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 368 KQIIHRDLKSPNVLIGSKEEA-KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRN-EQC 425
I HRD+K N+L+ K+ DFG+ ++ +S + + APE+I
Sbjct: 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDY 200
Query: 426 SDKIDIWSYGIVLWELL 442
+ ID+WS G VL ELL
Sbjct: 201 TSSIDVWSAGCVLAELL 217
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 99/226 (43%), Gaps = 41/226 (18%)
Query: 255 EWEIPFESISDLQWLGSGAQGAVFSGKLRSEIVAVKKV----REQ--KETDIRHLRKLNH 308
E + +++ L+ +G G GAV+ G L VAVK R+ E +I + + H
Sbjct: 7 EPSLDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEH 66
Query: 309 PNIVKF-----KGVCTQAPCYCIVMEYCAYGPL--YNLLKDGEEVPPQRLYNWARQIAAG 361
NI +F + Y +VMEY G L Y L + V RL A + G
Sbjct: 67 DNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRL---AHSVTRG 123
Query: 362 MNYLHSK---------QIIHRDLKSPNVLIGSKEEAKISDFG---------TCREWNNKS 403
+ YLH++ I HRDL S NVL+ + ISDFG R +
Sbjct: 124 LAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDN 183
Query: 404 TKMSFAGTVAWMAPEVIRN-------EQCSDKIDIWSYGIVLWELL 442
+S GT+ +MAPEV+ E ++D+++ G++ WE+
Sbjct: 184 AAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 77/165 (46%), Gaps = 5/165 (3%)
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWA 355
+E D+ + +L+HP VK + Y G L ++ +
Sbjct: 81 RERDV--MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 138
Query: 356 RQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTV 412
+I + + YLH K IIHRDLK N+L+ +I+DFGT + + +S + F GT
Sbjct: 139 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 413 AWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVDSSAII 457
+++PE++ + D+W+ G ++++L+ P++ + I
Sbjct: 199 QYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIF 243
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+ +I+DFGT + + +S + F GT +++PE++ + D+W
Sbjct: 163 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALG- 221
Query: 234 LCFPTSLMARIGEFKS 249
C L+A + F++
Sbjct: 222 -CIIYQLVAGLPPFRA 236
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 76/157 (48%), Gaps = 5/157 (3%)
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWA 355
+E D+ + +L+HP VK + Y G L ++ +
Sbjct: 79 RERDV--MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 136
Query: 356 RQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTV 412
+I + + YLH K IIHRDLK N+L+ +I+DFGT + + +S + +F GT
Sbjct: 137 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTA 196
Query: 413 AWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYK 449
+++PE++ + D+W+ G ++++L+ P++
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 233
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+ +I+DFGT + + +S + +F GT +++PE++ + D+W
Sbjct: 161 ILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALG- 219
Query: 234 LCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQW 268
C L+A + F++ +E+ I F+ I L++
Sbjct: 220 -CIIYQLVAGLPPFRA---GNEYLI-FQKIIKLEY 249
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 20/215 (9%)
Query: 245 GEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVRE--QKETDI 300
+F S + D + +L+ +GSGAQG V + + VA+KK+ Q +T
Sbjct: 9 NQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA 68
Query: 301 RH-------LRKLNHPNIVKFKGVCTQAPCY------CIVMEYCAYGPLYNLLKDGEEVP 347
+ ++ +NH NI+ V T +VME L +++ E+
Sbjct: 69 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQ--MELD 125
Query: 348 PQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMS 407
+R+ Q+ G+ +LHS IIHRDLK N+++ S KI DFG R
Sbjct: 126 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP 185
Query: 408 FAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELL 442
+ T + APEVI + +DIWS G ++ E++
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 23/54 (42%)
Query: 176 GVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+++ S KI DFG R + T + APEVI + +DIW
Sbjct: 157 NIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 210
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 20/215 (9%)
Query: 245 GEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVRE--QKETDI 300
+F S + D + +L+ +GSGAQG V + + VA+KK+ Q +T
Sbjct: 7 NQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA 66
Query: 301 RH-------LRKLNHPNIVKFKGVCTQAPCY------CIVMEYCAYGPLYNLLKDGEEVP 347
+ ++ +NH NI+ V T +VME L +++ E+
Sbjct: 67 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQ--MELD 123
Query: 348 PQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMS 407
+R+ Q+ G+ +LHS IIHRDLK N+++ S KI DFG R
Sbjct: 124 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP 183
Query: 408 FAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELL 442
+ T + APEVI + +DIWS G ++ E++
Sbjct: 184 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 218
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 23/54 (42%)
Query: 176 GVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+++ S KI DFG R + T + APEVI + +DIW
Sbjct: 155 NIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 208
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 20/215 (9%)
Query: 245 GEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVRE--QKETDI 300
+F S + D + +L+ +GSGAQG V + + VA+KK+ Q +T
Sbjct: 46 NQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA 105
Query: 301 RH-------LRKLNHPNIVKFKGVCTQAPCY------CIVMEYCAYGPLYNLLKDGEEVP 347
+ ++ +NH NI+ V T +VME L +++ E+
Sbjct: 106 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQ--MELD 162
Query: 348 PQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMS 407
+R+ Q+ G+ +LHS IIHRDLK N+++ S KI DFG R
Sbjct: 163 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP 222
Query: 408 FAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELL 442
+ T + APEVI + +DIWS G ++ E++
Sbjct: 223 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 23/54 (42%)
Query: 176 GVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+++ S KI DFG R + T + APEVI + +DIW
Sbjct: 194 NIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 247
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 20/215 (9%)
Query: 245 GEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVRE--QKETDI 300
+F S + D + +L+ +GSGAQG V + + VA+KK+ Q +T
Sbjct: 8 NQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA 67
Query: 301 RH-------LRKLNHPNIVKFKGVCTQAPCY------CIVMEYCAYGPLYNLLKDGEEVP 347
+ ++ +NH NI+ V T +VME L +++ E+
Sbjct: 68 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQ--MELD 124
Query: 348 PQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMS 407
+R+ Q+ G+ +LHS IIHRDLK N+++ S KI DFG R
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP 184
Query: 408 FAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELL 442
+ T + APEVI + +DIWS G ++ E++
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 23/54 (42%)
Query: 176 GVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+++ S KI DFG R + T + APEVI + +DIW
Sbjct: 156 NIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 209
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 20/215 (9%)
Query: 245 GEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVRE--QKETDI 300
+F S + D + +L+ +GSGAQG V + + VA+KK+ Q +T
Sbjct: 8 NQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA 67
Query: 301 RH-------LRKLNHPNIVKFKGVCTQAPCY------CIVMEYCAYGPLYNLLKDGEEVP 347
+ ++ +NH NI+ V T +VME L +++ E+
Sbjct: 68 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQ--MELD 124
Query: 348 PQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMS 407
+R+ Q+ G+ +LHS IIHRDLK N+++ S KI DFG R
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP 184
Query: 408 FAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELL 442
+ T + APEVI + +DIWS G ++ E++
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 23/54 (42%)
Query: 176 GVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+++ S KI DFG R + T + APEVI + +DIW
Sbjct: 156 NIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 209
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 20/215 (9%)
Query: 245 GEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVRE--QKETDI 300
+F S + D + +L+ +GSGAQG V + + VA+KK+ Q +T
Sbjct: 9 NQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA 68
Query: 301 RH-------LRKLNHPNIVKFKGVCTQAPCY------CIVMEYCAYGPLYNLLKDGEEVP 347
+ ++ +NH NI+ V T +VME L +++ E+
Sbjct: 69 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQ--MELD 125
Query: 348 PQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMS 407
+R+ Q+ G+ +LHS IIHRDLK N+++ S KI DFG R
Sbjct: 126 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP 185
Query: 408 FAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELL 442
+ T + APEVI + +DIWS G ++ E++
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 23/54 (42%)
Query: 176 GVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+++ S KI DFG R + T + APEVI + +DIW
Sbjct: 157 NIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 210
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 22/216 (10%)
Query: 245 GEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVRE--QKETDI 300
+F S + D + +L+ +GSGAQG V + + VA+KK+ Q +T
Sbjct: 2 NQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA 61
Query: 301 RH-------LRKLNHPNIVKFKGVCTQAPCY------CIVMEYCAYGPLYNLLKDGE-EV 346
+ ++ +NH NI+ V T +VME NL + + E+
Sbjct: 62 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA----NLCQVIQMEL 117
Query: 347 PPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKM 406
+R+ Q+ G+ +LHS IIHRDLK N+++ S KI DFG R
Sbjct: 118 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMT 177
Query: 407 SFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELL 442
+ T + APEVI + +DIWS G ++ E++
Sbjct: 178 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 23/54 (42%)
Query: 176 GVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+++ S KI DFG R + T + APEVI + +DIW
Sbjct: 150 NIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 203
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 22/216 (10%)
Query: 245 GEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVRE--QKETDI 300
+F S + D + +L+ +GSGAQG V + + VA+KK+ Q +T
Sbjct: 1 NQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA 60
Query: 301 RH-------LRKLNHPNIVKFKGVCTQAPCY------CIVMEYCAYGPLYNLLKDGE-EV 346
+ ++ +NH NI+ V T +VME NL + + E+
Sbjct: 61 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA----NLCQVIQMEL 116
Query: 347 PPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKM 406
+R+ Q+ G+ +LHS IIHRDLK N+++ S KI DFG R
Sbjct: 117 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMT 176
Query: 407 SFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELL 442
+ T + APEVI + +DIWS G ++ E++
Sbjct: 177 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 23/54 (42%)
Query: 176 GVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+++ S KI DFG R + T + APEVI + +DIW
Sbjct: 149 NIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 202
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 97/196 (49%), Gaps = 12/196 (6%)
Query: 262 SISDLQWLGSGAQGAVFSGKLRSEIVAVKKVREQ---KETDIRHLRKLNHPNIVKFKGVC 318
+ ++Q + A V++ KL S+ +K+ +E DI N P +V+
Sbjct: 87 AFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA--NSPWVVQLFCAF 144
Query: 319 TQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSP 378
+VMEY G L NL+ + +VP + + ++ ++ +HS +IHRD+K
Sbjct: 145 QDDKYLYMVMEYMPGGDLVNLMSN-YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPD 203
Query: 379 NVLIGSKEEAKISDFGTCREWNNKSTKM--SFAGTVAWMAPEVIRNEQCSD----KIDIW 432
N+L+ K++DFGTC + + + GT +++PEV++++ + D W
Sbjct: 204 NMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWW 263
Query: 433 SYGIVLWELLTCETPY 448
S G+ L+E+L +TP+
Sbjct: 264 SVGVFLFEMLVGDTPF 279
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 22/216 (10%)
Query: 245 GEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVRE--QKETDI 300
+F S + D + +L+ +GSGAQG V + + VA+KK+ Q +T
Sbjct: 2 NQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA 61
Query: 301 RH-------LRKLNHPNIVKFKGVCTQAPCY------CIVMEYCAYGPLYNLLKDGE-EV 346
+ ++ +NH NI+ V T +VME NL + + E+
Sbjct: 62 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA----NLCQVIQMEL 117
Query: 347 PPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKM 406
+R+ Q+ G+ +LHS IIHRDLK N+++ S KI DFG R
Sbjct: 118 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMT 177
Query: 407 SFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELL 442
+ T + APEVI + +DIWS G ++ E++
Sbjct: 178 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 23/54 (42%)
Query: 176 GVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
+++ S KI DFG R + T + APEVI + +DIW
Sbjct: 150 NIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 203
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 262 SISDLQWLGSGAQGAVFSGKL--RSEIVAVKKVREQKETDIRHL---RKLNHPNIVKFK- 315
S +D + +G+G+ G V+ KL E+VA+KKV + K R L RKL+H NIV+ +
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 316 -----GVCTQAPCYCIVMEYC---AYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHS 367
G +V++Y Y + + + +P + + Q+ + Y+HS
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 368 KQIIHRDLKSPNVLIGSKEEA-KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRN-EQC 425
I HRD+K N+L+ K+ DFG+ ++ +S + + APE+I
Sbjct: 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDY 200
Query: 426 SDKIDIWSYGIVLWELL 442
+ ID+WS G VL ELL
Sbjct: 201 TSSIDVWSAGCVLAELL 217
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 262 SISDLQWLGSGAQGAVFSGKL--RSEIVAVKKVREQKETDIRHL---RKLNHPNIVKFK- 315
S +D + +G+G+ G V+ KL E+VA+KKV + K R L RKL+H NIV+ +
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 99
Query: 316 -----GVCTQAPCYCIVMEYC---AYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHS 367
G +V++Y Y + + + +P + + Q+ + Y+HS
Sbjct: 100 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 159
Query: 368 KQIIHRDLKSPNVLIGSKEEA-KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRN-EQC 425
I HRD+K N+L+ K+ DFG+ ++ +S + + APE+I
Sbjct: 160 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDY 219
Query: 426 SDKIDIWSYGIVLWELL 442
+ ID+WS G VL ELL
Sbjct: 220 TSSIDVWSAGCVLAELL 236
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 262 SISDLQWLGSGAQGAVFSGKL--RSEIVAVKKVREQKETDIRHL---RKLNHPNIVKFK- 315
S +D + +G+G+ G V+ KL E+VA+KKV + K R L RKL+H NIV+ +
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 81
Query: 316 -----GVCTQAPCYCIVMEYC---AYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHS 367
G +V++Y Y + + + +P + + Q+ + Y+HS
Sbjct: 82 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 141
Query: 368 KQIIHRDLKSPNVLIGSKEEA-KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRN-EQC 425
I HRD+K N+L+ K+ DFG+ ++ +S + + APE+I
Sbjct: 142 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDY 201
Query: 426 SDKIDIWSYGIVLWELL 442
+ ID+WS G VL ELL
Sbjct: 202 TSSIDVWSAGCVLAELL 218
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 262 SISDLQWLGSGAQGAVFSGKL--RSEIVAVKKVREQKETDIRHL---RKLNHPNIVKFK- 315
S +D + +G+G+ G V+ KL E+VA+KKV + K R L RKL+H NIV+ +
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 316 -----GVCTQAPCYCIVMEYC---AYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHS 367
G +V++Y Y + + + +P + + Q+ + Y+HS
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 368 KQIIHRDLKSPNVLIGSKEEA-KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRN-EQC 425
I HRD+K N+L+ K+ DFG+ ++ +S + + APE+I
Sbjct: 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDY 200
Query: 426 SDKIDIWSYGIVLWELL 442
+ ID+WS G VL ELL
Sbjct: 201 TSSIDVWSAGCVLAELL 217
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 262 SISDLQWLGSGAQGAVFSGKL--RSEIVAVKKVREQKETDIRHL---RKLNHPNIVKFK- 315
S +D + +G+G+ G V+ KL E+VA+KKV + K R L RKL+H NIV+ +
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 92
Query: 316 -----GVCTQAPCYCIVMEYC---AYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHS 367
G +V++Y Y + + + +P + + Q+ + Y+HS
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 152
Query: 368 KQIIHRDLKSPNVLIGSKEEA-KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRN-EQC 425
I HRD+K N+L+ K+ DFG+ ++ +S + + APE+I
Sbjct: 153 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDY 212
Query: 426 SDKIDIWSYGIVLWELL 442
+ ID+WS G VL ELL
Sbjct: 213 TSSIDVWSAGCVLAELL 229
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 96/218 (44%), Gaps = 34/218 (15%)
Query: 261 ESISDLQ---WLGSGAQGAVFSGKLRSEI------VAVKKV------------REQKETD 299
E I D + LG G+ F+G R+E VA+K + R Q E
Sbjct: 8 EKIEDFKVGNLLGKGS----FAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVK 63
Query: 300 IRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPP---QRLYNWAR 356
I +L HP+I++ + +V+E C G + LK+ V P ++
Sbjct: 64 IH--CQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKN--RVKPFSENEARHFMH 119
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTK-MSFAGTVAWM 415
QI GM YLHS I+HRDL N+L+ KI+DFG + K + GT ++
Sbjct: 120 QIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYI 179
Query: 416 APEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVDS 453
+PE+ + D+WS G + + LL P+ D D+
Sbjct: 180 SPEIATRSAHGLESDVWSLGCMFYTLLIGRPPF-DTDT 216
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 262 SISDLQWLGSGAQGAVFSGKL--RSEIVAVKKVREQKETDIRHL---RKLNHPNIVKFK- 315
S +D + +G+G+ G V+ KL E+VA+KKV + K R L RKL+H NIV+ +
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 88
Query: 316 -----GVCTQAPCYCIVMEYC---AYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHS 367
G +V++Y Y + + + +P + + Q+ + Y+HS
Sbjct: 89 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 148
Query: 368 KQIIHRDLKSPNVLIGSKEEA-KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRN-EQC 425
I HRD+K N+L+ K+ DFG+ ++ +S + + APE+I
Sbjct: 149 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDY 208
Query: 426 SDKIDIWSYGIVLWELL 442
+ ID+WS G VL ELL
Sbjct: 209 TSSIDVWSAGCVLAELL 225
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 77/165 (46%), Gaps = 5/165 (3%)
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWA 355
+E D+ + +L+HP VK + Y G L ++ +
Sbjct: 81 RERDV--MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 138
Query: 356 RQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTV 412
+I + + YLH K IIHRDLK N+L+ +I+DFGT + + +S + F GT
Sbjct: 139 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 413 AWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVDSSAII 457
+++PE++ + D+W+ G ++++L+ P++ + I
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIF 243
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+ +I+DFGT + + +S + F GT +++PE++ + D+W
Sbjct: 163 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG- 221
Query: 234 LCFPTSLMARIGEFKS 249
C L+A + F++
Sbjct: 222 -CIIYQLVAGLPPFRA 236
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 262 SISDLQWLGSGAQGAVFSGKL--RSEIVAVKKVREQKETDIRHL---RKLNHPNIVKFK- 315
S +D + +G+G+ G V+ KL E+VA+KKV + K R L RKL+H NIV+ +
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 92
Query: 316 -----GVCTQAPCYCIVMEYC---AYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHS 367
G +V++Y Y + + + +P + + Q+ + Y+HS
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 152
Query: 368 KQIIHRDLKSPNVLIGSKEEA-KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNE-QC 425
I HRD+K N+L+ K+ DFG+ ++ +S + + APE+I
Sbjct: 153 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDY 212
Query: 426 SDKIDIWSYGIVLWELL 442
+ ID+WS G VL ELL
Sbjct: 213 TSSIDVWSAGCVLAELL 229
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 262 SISDLQWLGSGAQGAVFSGKL--RSEIVAVKKVREQKETDIRHL---RKLNHPNIVKFK- 315
S +D + +G+G+ G V+ KL E+VA+KKV + K R L RKL+H NIV+ +
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 84
Query: 316 -----GVCTQAPCYCIVMEYC---AYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHS 367
G +V++Y Y + + + +P + + Q+ + Y+HS
Sbjct: 85 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 144
Query: 368 KQIIHRDLKSPNVLIGSKEEA-KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRN-EQC 425
I HRD+K N+L+ K+ DFG+ ++ +S + + APE+I
Sbjct: 145 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDY 204
Query: 426 SDKIDIWSYGIVLWELL 442
+ ID+WS G VL ELL
Sbjct: 205 TSSIDVWSAGCVLAELL 221
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 5/157 (3%)
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWA 355
+E D+ + +L+HP VK + Y G L ++ +
Sbjct: 79 RERDV--MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 136
Query: 356 RQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTV 412
+I + + YLH K IIHRDLK N+L+ +I+DFGT + + +S + F GT
Sbjct: 137 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 196
Query: 413 AWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYK 449
+++PE++ + D+W+ G ++++L+ P++
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 233
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+ +I+DFGT + + +S + F GT +++PE++ + D+W
Sbjct: 161 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG- 219
Query: 234 LCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQW 268
C L+A + F++ +E+ I F+ I L++
Sbjct: 220 -CIIYQLVAGLPPFRA---GNEYLI-FQKIIKLEY 249
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 262 SISDLQWLGSGAQGAVFSGKL--RSEIVAVKKVREQKETDIRHL---RKLNHPNIVKFK- 315
S +D + +G+G+ G V+ KL E+VA+KKV + K R L RKL+H NIV+ +
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 114
Query: 316 -----GVCTQAPCYCIVMEYC---AYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHS 367
G +V++Y Y + + + +P + + Q+ + Y+HS
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 174
Query: 368 KQIIHRDLKSPNVLIGSKEEA-KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNE-QC 425
I HRD+K N+L+ K+ DFG+ ++ +S + + APE+I
Sbjct: 175 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDY 234
Query: 426 SDKIDIWSYGIVLWELL 442
+ ID+WS G VL ELL
Sbjct: 235 TSSIDVWSAGCVLAELL 251
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 5/157 (3%)
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWA 355
+E D+ + +L+HP VK + Y G L ++ +
Sbjct: 79 RERDV--MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 136
Query: 356 RQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTV 412
+I + + YLH K IIHRDLK N+L+ +I+DFGT + + +S + F GT
Sbjct: 137 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 196
Query: 413 AWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYK 449
+++PE++ + D+W+ G ++++L+ P++
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 233
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+ +I+DFGT + + +S + F GT +++PE++ + D+W
Sbjct: 161 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG- 219
Query: 234 LCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQW 268
C L+A + F++ +E+ I F+ I L++
Sbjct: 220 -CIIYQLVAGLPPFRA---GNEYLI-FQKIIKLEY 249
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 5/157 (3%)
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWA 355
+E D+ + +L+HP VK + Y G L ++ +
Sbjct: 81 RERDV--MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 138
Query: 356 RQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTV 412
+I + + YLH K IIHRDLK N+L+ +I+DFGT + + +S + F GT
Sbjct: 139 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 413 AWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYK 449
+++PE++ + D+W+ G ++++L+ P++
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 235
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+ +I+DFGT + + +S + F GT +++PE++ + D+W
Sbjct: 163 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG- 221
Query: 234 LCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQW 268
C L+A + F++ +E+ I F+ I L++
Sbjct: 222 -CIIYQLVAGLPPFRA---GNEYLI-FQKIIKLEY 251
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 5/157 (3%)
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWA 355
+E D+ + +L+HP VK + Y G L ++ +
Sbjct: 79 RERDV--MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 136
Query: 356 RQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTV 412
+I + + YLH K IIHRDLK N+L+ +I+DFGT + + +S + F GT
Sbjct: 137 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 196
Query: 413 AWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYK 449
+++PE++ + D+W+ G ++++L+ P++
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 233
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+ +I+DFGT + + +S + F GT +++PE++ + D+W
Sbjct: 161 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG- 219
Query: 234 LCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQW 268
C L+A + F++ +E+ I F+ I L++
Sbjct: 220 -CIIYQLVAGLPPFRA---GNEYLI-FQKIIKLEY 249
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 5/157 (3%)
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWA 355
+E D+ + +L+HP VK + Y G L ++ +
Sbjct: 81 RERDV--MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 138
Query: 356 RQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTV 412
+I + + YLH K IIHRDLK N+L+ +I+DFGT + + +S + F GT
Sbjct: 139 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 413 AWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYK 449
+++PE++ + D+W+ G ++++L+ P++
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 235
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+ +I+DFGT + + +S + F GT +++PE++ + D+W
Sbjct: 163 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG- 221
Query: 234 LCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQW 268
C L+A + F++ +E+ I F+ I L++
Sbjct: 222 -CIIYQLVAGLPPFRA---GNEYLI-FQKIIKLEY 251
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 5/157 (3%)
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWA 355
+E D+ + +L+HP VK + Y G L ++ +
Sbjct: 84 RERDV--MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 141
Query: 356 RQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTV 412
+I + + YLH K IIHRDLK N+L+ +I+DFGT + + +S + F GT
Sbjct: 142 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 201
Query: 413 AWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYK 449
+++PE++ + D+W+ G ++++L+ P++
Sbjct: 202 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 238
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+ +I+DFGT + + +S + F GT +++PE++ + D+W
Sbjct: 166 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG- 224
Query: 234 LCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQW 268
C L+A + F++ +E+ I F+ I L++
Sbjct: 225 -CIIYQLVAGLPPFRA---GNEYLI-FQKIIKLEY 254
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 5/157 (3%)
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWA 355
+E D+ + +L+HP VK + Y G L ++ +
Sbjct: 63 RERDV--MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 120
Query: 356 RQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTV 412
+I + + YLH K IIHRDLK N+L+ +I+DFGT + + +S + F GT
Sbjct: 121 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 180
Query: 413 AWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYK 449
+++PE++ + D+W+ G ++++L+ P++
Sbjct: 181 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 217
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+ +I+DFGT + + +S + F GT +++PE++ + D+W
Sbjct: 145 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG- 203
Query: 234 LCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQW 268
C L+A + F++ +E+ I F+ I L++
Sbjct: 204 -CIIYQLVAGLPPFRA---GNEYLI-FQKIIKLEY 233
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 5/157 (3%)
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWA 355
+E D+ + +L+HP VK + Y G L ++ +
Sbjct: 78 RERDV--MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 135
Query: 356 RQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTV 412
+I + + YLH K IIHRDLK N+L+ +I+DFGT + + +S + F GT
Sbjct: 136 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 195
Query: 413 AWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYK 449
+++PE++ + D+W+ G ++++L+ P++
Sbjct: 196 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 232
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+ +I+DFGT + + +S + F GT +++PE++ + D+W
Sbjct: 160 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG- 218
Query: 234 LCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQW 268
C L+A + F++ +E+ I F+ I L++
Sbjct: 219 -CIIYQLVAGLPPFRA---GNEYLI-FQKIIKLEY 248
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 5/157 (3%)
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWA 355
+E D+ + +L+HP VK + Y G L ++ +
Sbjct: 57 RERDV--MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 114
Query: 356 RQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTV 412
+I + + YLH K IIHRDLK N+L+ +I+DFGT + + +S + F GT
Sbjct: 115 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 174
Query: 413 AWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYK 449
+++PE++ + D+W+ G ++++L+ P++
Sbjct: 175 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 211
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+ +I+DFGT + + +S + F GT +++PE++ + D+W
Sbjct: 139 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG- 197
Query: 234 LCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQW 268
C L+A + F++ +E+ I F+ I L++
Sbjct: 198 -CIIYQLVAGLPPFRA---GNEYLI-FQKIIKLEY 227
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 5/157 (3%)
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWA 355
+E D+ + +L+HP VK + Y G L ++ +
Sbjct: 82 RERDV--MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 139
Query: 356 RQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTV 412
+I + + YLH K IIHRDLK N+L+ +I+DFGT + + +S + F GT
Sbjct: 140 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 199
Query: 413 AWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYK 449
+++PE++ + D+W+ G ++++L+ P++
Sbjct: 200 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 236
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+ +I+DFGT + + +S + F GT +++PE++ + D+W
Sbjct: 164 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG- 222
Query: 234 LCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQW 268
C L+A + F++ +E+ I F+ I L++
Sbjct: 223 -CIIYQLVAGLPPFRA---GNEYLI-FQKIIKLEY 252
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 247 FKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVRE--QKETDIRH 302
F S + D + +L+ +GSGAQG V + + VA+KK+ Q +T +
Sbjct: 4 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKR 63
Query: 303 -------LRKLNHPNIVKFKGVCTQAPCY------CIVMEYCAYGPLYNLLKDGEEVPPQ 349
++ +NH NI+ V T IVME L +++ E+ +
Sbjct: 64 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQ--MELDHE 120
Query: 350 RLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFA 409
R+ Q+ G+ +LHS IIHRDLK N+++ S KI DFG R +
Sbjct: 121 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV 180
Query: 410 GTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELL 442
T + APEVI + +D+WS G ++ E++
Sbjct: 181 VTRYYRAPEVILGMGYKENVDLWSVGCIMGEMV 213
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 125/277 (45%), Gaps = 29/277 (10%)
Query: 246 EFKSFVLRDEWEIPFESISDLQWLGSGAQGAVF------SGKLRSEIVAVKKVREQKETD 299
E K + + D++++ Q LG G G V +G+ + + + ++E D
Sbjct: 20 EPKKYAVTDDYQL------SKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVD 73
Query: 300 IRHLRKLNHPNIV----KFKGVCTQAPCYCIVMEYCAYGPLYNLLKD-GEEVPPQR-LYN 353
H + P+IV ++ + C I+ME G L++ +++ G++ +R
Sbjct: 74 -HHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAE 132
Query: 354 WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEE---AKISDFGTCREWNNKSTKMSFAG 410
R I + +LHS I HRD+K N+L SKE+ K++DFG +E + +
Sbjct: 133 IMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTP-CY 191
Query: 411 TVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVDSSAIIWG------VGSSS 464
T ++APEV+ E+ D+WS G++++ LL P+ AI G +G
Sbjct: 192 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYG 251
Query: 465 LHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
P S + + L+++ P+ R + Q ++H
Sbjct: 252 FPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 5/157 (3%)
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWA 355
+E D+ + +L+HP VK + Y G L ++ +
Sbjct: 81 RERDV--MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 138
Query: 356 RQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTV 412
+I + + YLH K IIHRDLK N+L+ +I+DFGT + + +S + F GT
Sbjct: 139 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 413 AWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYK 449
+++PE++ + D+W+ G ++++L+ P++
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 235
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+ +I+DFGT + + +S + F GT +++PE++ + D+W
Sbjct: 163 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG- 221
Query: 234 LCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQW 268
C L+A + F++ +E+ I F+ I L++
Sbjct: 222 -CIIYQLVAGLPPFRA---GNEYLI-FQKIIKLEY 251
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 125/277 (45%), Gaps = 29/277 (10%)
Query: 246 EFKSFVLRDEWEIPFESISDLQWLGSGAQGAVF------SGKLRSEIVAVKKVREQKETD 299
E K + + D++++ Q LG G G V +G+ + + + ++E D
Sbjct: 1 EPKKYAVTDDYQL------SKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVD 54
Query: 300 IRHLRKLNHPNIV----KFKGVCTQAPCYCIVMEYCAYGPLYNLLKD-GEEVPPQR-LYN 353
H + P+IV ++ + C I+ME G L++ +++ G++ +R
Sbjct: 55 -HHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAE 113
Query: 354 WARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEE---AKISDFGTCREWNNKSTKMSFAG 410
R I + +LHS I HRD+K N+L SKE+ K++DFG +E + +
Sbjct: 114 IMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTP-CY 172
Query: 411 TVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVDSSAIIWG------VGSSS 464
T ++APEV+ E+ D+WS G++++ LL P+ AI G +G
Sbjct: 173 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYG 232
Query: 465 LHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
P S + + L+++ P+ R + Q ++H
Sbjct: 233 FPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 269
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 93/202 (46%), Gaps = 31/202 (15%)
Query: 266 LQWLGSGAQGAVFSG--KLRSEIVAVKKVREQKE-----TDIRH---LRKLNHPNIVKFK 315
L+ LG+G V+ G K VA+K+V+ E T IR +++L H NIV+
Sbjct: 10 LEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLY 69
Query: 316 GVCTQAPCYCIVMEYCAYGPLYNLLKD------------GEEVPPQRLYNWARQIAAGMN 363
V +V E+ + N LK G E+ + + W Q+ G+
Sbjct: 70 DVIHTENKLTLVFEF-----MDNDLKKYMDSRTVGNTPRGLELNLVKYFQW--QLLQGLA 122
Query: 364 YLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIRN 422
+ H +I+HRDLK N+LI + + K+ DFG R + S W AP+V+
Sbjct: 123 FCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMG 182
Query: 423 EQC-SDKIDIWSYGIVLWELLT 443
+ S IDIWS G +L E++T
Sbjct: 183 SRTYSTSIDIWSCGCILAEMIT 204
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 92/201 (45%), Gaps = 16/201 (7%)
Query: 266 LQWLGSGA-----------QGAVFSGKLRSEIVAVKKVREQKETDIRHLRKLNHPNIVKF 314
L+ LGSGA G VF K + + K + E I + +L+HP ++
Sbjct: 56 LEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISI--MNQLHHPKLINL 113
Query: 315 KGVCTQAPCYCIVMEYCAYGPLYN-LLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHR 373
+++E+ + G L++ + + ++ + N+ RQ G+ ++H I+H
Sbjct: 114 HDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHL 173
Query: 374 DLKSPNVLIGSKEEA--KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDI 431
D+K N++ +K+ + KI DFG + N T + APE++ E D+
Sbjct: 174 DIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDM 233
Query: 432 WSYGIVLWELLTCETPYKDVD 452
W+ G++ + LL+ +P+ D
Sbjct: 234 WAIGVLGYVLLSGLSPFAGED 254
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 82/170 (48%), Gaps = 13/170 (7%)
Query: 289 VKKVREQKETDIRHLRKL-NHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVP 347
+++VRE + LR++ HP+I+ + +V + G L++ L + +
Sbjct: 139 LEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALS 198
Query: 348 PQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMS 407
+ + R + +++LH+ I+HRDLK N+L+ + ++SDFG
Sbjct: 199 EKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRE 258
Query: 408 FAGTVAWMAPEVIRNEQCS---------DKIDIWSYGIVLWELLTCETPY 448
GT ++APE+++ CS ++D+W+ G++L+ LL P+
Sbjct: 259 LCGTPGYLAPEILK---CSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 5/157 (3%)
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWA 355
+E D+ + +L+HP VK + Y G L ++ +
Sbjct: 58 RERDV--MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 115
Query: 356 RQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTV 412
+I + + YLH K IIHRDLK N+L+ +I+DFGT + + +S + F GT
Sbjct: 116 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 175
Query: 413 AWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYK 449
+++PE++ + D+W+ G ++++L+ P++
Sbjct: 176 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 212
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+ +I+DFGT + + +S + F GT +++PE++ + D+W
Sbjct: 140 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG- 198
Query: 234 LCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQW 268
C L+A + F++ +E+ I F+ I L++
Sbjct: 199 -CIIYQLVAGLPPFRA---GNEYLI-FQKIIKLEY 228
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 5/157 (3%)
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWA 355
+E D+ + +L+HP VK + Y G L ++ +
Sbjct: 56 RERDV--MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 113
Query: 356 RQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTV 412
+I + + YLH K IIHRDLK N+L+ +I+DFGT + + +S + F GT
Sbjct: 114 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 173
Query: 413 AWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYK 449
+++PE++ + D+W+ G ++++L+ P++
Sbjct: 174 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 210
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+ +I+DFGT + + +S + F GT +++PE++ + D+W
Sbjct: 138 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG- 196
Query: 234 LCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQW 268
C L+A + F++ +E+ I F+ I L++
Sbjct: 197 -CIIYQLVAGLPPFRA---GNEYLI-FQKIIKLEY 226
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 10/162 (6%)
Query: 295 QKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPL-YNLLK--DGEEVPPQRL 351
++E I H+ L HP+IV+ + +V E+ L + ++K D V + +
Sbjct: 74 KREASICHM--LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAV 131
Query: 352 Y-NWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEA---KISDFGTCREWNNKS-TKM 406
++ RQI + Y H IIHRD+K NVL+ SKE + K+ DFG +
Sbjct: 132 ASHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAG 191
Query: 407 SFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
GT +MAPEV++ E +D+W G++L+ LL+ P+
Sbjct: 192 GRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 177 VLIGSKEEA---KISDFGTCREWNNKS-TKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ SKE + K+ DFG + GT +MAPEV++ E +D+W
Sbjct: 161 VLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVW 217
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 5/157 (3%)
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWA 355
+E D+ + +L+HP VK + Y G L ++ +
Sbjct: 59 RERDV--MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 116
Query: 356 RQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTV 412
+I + + YLH K IIHRDLK N+L+ +I+DFGT + + +S + F GT
Sbjct: 117 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 176
Query: 413 AWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYK 449
+++PE++ + D+W+ G ++++L+ P++
Sbjct: 177 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 213
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+ +I+DFGT + + +S + F GT +++PE++ + D+W
Sbjct: 141 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG- 199
Query: 234 LCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQW 268
C L+A + F++ +E+ I F+ I L++
Sbjct: 200 -CIIYQLVAGLPPFRA---GNEYLI-FQKIIKLEY 229
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 262 SISDLQWLGSGAQGAVFSGKL--RSEIVAVKKVREQKETDIRHL---RKLNHPNIVKFK- 315
S +D + +G+G+ G V+ KL E+VA+KKV + K R L RKL+H NIV+ +
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRY 80
Query: 316 -----GVCTQAPCYCIVMEYC---AYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHS 367
G +V++Y Y + + + +P + + Q+ + Y+HS
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 368 KQIIHRDLKSPNVLIGSKEEA-KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRN-EQC 425
I HRD+K N+L+ K+ DFG+ ++ +S + + APE+I
Sbjct: 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDY 200
Query: 426 SDKIDIWSYGIVLWELL 442
+ ID+WS G VL ELL
Sbjct: 201 TSSIDVWSAGCVLAELL 217
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 101/214 (47%), Gaps = 33/214 (15%)
Query: 265 DLQWLGSGAQGAVFSGKLRS--EIVAVKKVREQKETDIRH-------LRKLNHPNIVKF- 314
DL+ LG G G VFS + VA+KK+ ++H +R+L+H NIVK
Sbjct: 15 DLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVF 74
Query: 315 -------------KGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQ-RLYNWARQIAA 360
G T+ IV EY L N+L+ G + RL+ + Q+
Sbjct: 75 EILGPSGSQLTDDVGSLTELNSVYIVQEYMETD-LANVLEQGPLLEEHARLFMY--QLLR 131
Query: 361 GMNYLHSKQIIHRDLKSPNVLIGSKEEA-KISDFGTCR----EWNNKSTKMSFAGTVAWM 415
G+ Y+HS ++HRDLK N+ I +++ KI DFG R +++K T +
Sbjct: 132 GLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYR 191
Query: 416 APEVIRNEQCSDK-IDIWSYGIVLWELLTCETPY 448
+P ++ + K ID+W+ G + E+LT +T +
Sbjct: 192 SPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLF 225
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 5/157 (3%)
Query: 296 KETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWA 355
+E D+ + +L+HP VK + Y G L ++ +
Sbjct: 86 RERDV--MSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 143
Query: 356 RQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTV 412
+I + + YLH K IIHRDLK N+L+ +I+DFGT + + +S + F GT
Sbjct: 144 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 203
Query: 413 AWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYK 449
+++PE++ + D+W+ G ++++L+ P++
Sbjct: 204 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 240
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 177 VLIGSKEEAKISDFGTCREWNNKSTKM---SFAGTVAWMAPEVIRNEQCSDKIDIWYKNR 233
+L+ +I+DFGT + + +S + F GT +++PE++ + D+W
Sbjct: 168 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG- 226
Query: 234 LCFPTSLMARIGEFKSFVLRDEWEIPFESISDLQW 268
C L+A + F++ +E+ I F+ I L++
Sbjct: 227 -CIIYQLVAGLPPFRA---GNEYLI-FQKIIKLEY 256
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 97/218 (44%), Gaps = 22/218 (10%)
Query: 243 RIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVRE--QKET 298
R F S + D + +L+ +GSGAQG V + + VA+KK+ Q +T
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 299 DIRH-------LRKLNHPNIVKFKGVCTQAPCY------CIVMEYCAYGPLYNLLKDGE- 344
+ ++ +NH NI+ V T IVME NL + +
Sbjct: 66 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA----NLCQVIQM 121
Query: 345 EVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKST 404
E+ +R+ Q+ G+ +LHS IIHRDLK N+++ S KI DFG R
Sbjct: 122 ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 181
Query: 405 KMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELL 442
T + APEVI + +DIWS G ++ E++
Sbjct: 182 MTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 115/256 (44%), Gaps = 22/256 (8%)
Query: 267 QWLGSGAQGAVFS--GKLRSEIVAVKKVRE----QKETDIRHLRKLNHPNIVK----FKG 316
Q LG G G V K E A+K +++ ++E ++ H R P+IV+ ++
Sbjct: 68 QVLGLGINGKVLQIFNKRTQEKFALKXLQDCPKARREVEL-HWRASQCPHIVRIVDVYEN 126
Query: 317 VCTQAPCYCIVMEYCAYGPLYNLLKD-GEEVPPQR-LYNWARQIAAGMNYLHSKQIIHRD 374
+ C IV E G L++ ++D G++ +R + I + YLHS I HRD
Sbjct: 127 LYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRD 186
Query: 375 LKSPNVLIGSKEE---AKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNEQCSDKIDI 431
+K N+L SK K++DFG +E + ++ + T ++APEV+ E+ D
Sbjct: 187 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDX 246
Query: 432 WSYGIVLWELLTCETPYKDVDSSAIIWG----VGSSSLHLPIP--STCPDGFQLLMKMCW 485
WS G++ + LL P+ AI G + P P S + + L++
Sbjct: 247 WSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSEVSEEVKXLIRNLL 306
Query: 486 SNAPSSRPSFKQILSH 501
P+ R + + +H
Sbjct: 307 KTEPTQRXTITEFXNH 322
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 80/173 (46%), Gaps = 8/173 (4%)
Query: 303 LRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGM 362
LR HPNI+ K V +V E G L + + + + I +
Sbjct: 70 LRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTV 129
Query: 363 NYLHSKQIIHRDLKSPNVLI----GSKEEAKISDFGTCREWNNKS-TKMSFAGTVAWMAP 417
YLH++ ++HRDLK N+L G+ E +I DFG ++ ++ M+ T ++AP
Sbjct: 130 EYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAP 189
Query: 418 EVIRNEQCSDKIDIWSYGIVLWELLTCETPYK---DVDSSAIIWGVGSSSLHL 467
EV+ + DIWS G++L+ +LT TP+ D I+ +GS L
Sbjct: 190 EVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSL 242
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 17/104 (16%)
Query: 180 GSKEEAKISDFGTCREWNNKS-TKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKNRLCF-- 236
G+ E +I DFG ++ ++ M+ T ++APEV+ + DIW L +
Sbjct: 154 GNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTM 213
Query: 237 --------------PTSLMARIGEFKSFVLRDEWEIPFESISDL 266
P ++ARIG K + W ++ DL
Sbjct: 214 LTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDL 257
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 111/276 (40%), Gaps = 36/276 (13%)
Query: 254 DEWEIPFESISDLQWLGSGAQGAVFSGK--LRSEIVAVKKVR------EQK----ETDIR 301
+ +E+ + + + LG GA G V + +I AVK++R EQK + DI
Sbjct: 27 ENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDIS 86
Query: 302 HLRKLNHPNIVKFKGVCTQAPCY--CIVMEYCAYGPLYNLLKD-GEEVPPQRLYNWARQI 358
R ++ P V F G + C + + Y + D G+ +P L A I
Sbjct: 87 X-RTVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSI 145
Query: 359 AAGMNYLHSK-QIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAP 417
+ +LHSK +IHRD+K NVLI + + K DFG + K AG + AP
Sbjct: 146 VKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAP 205
Query: 418 EVIRNE----QCSDKIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHL----PI 469
E I E S K DIWS GI EL PY DS WG L P
Sbjct: 206 ERINPELNQKGYSVKSDIWSLGITXIELAILRFPY---DS----WGTPFQQLKQVVEEPS 258
Query: 470 PSTCPDGFQL----LMKMCWSNAPSSRPSFKQILSH 501
P D F C RP++ ++ H
Sbjct: 259 PQLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQH 294
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 20/203 (9%)
Query: 269 LGSGAQGAVFSG--KLRSEIVAVKKVREQKE------TDIRH---LRKLNHPNIVKFKGV 317
LG G G V+ + +E VA+K++R + E T IR L++L H NI++ K V
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
Query: 318 CTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKS 377
++ EY A L + +V + + ++ Q+ G+N+ HS++ +HRDLK
Sbjct: 102 IHHNHRLHLIFEY-AENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKP 160
Query: 378 PNVLIGSKEEA-----KISDFGTCREWNNKSTKMSFAGTVAWMAPE--VIRNEQCSDKID 430
N+L+ + + KI DFG R + + + W P ++ + S +D
Sbjct: 161 QNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVD 220
Query: 431 IWSYGIVLWELLTCETPYKDVDS 453
IWS + W + +TP DS
Sbjct: 221 IWSIACI-WAEMLMKTPLFPGDS 242
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 96/215 (44%), Gaps = 20/215 (9%)
Query: 245 GEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVRE--QKETDI 300
+F S + D + L+ +GSGAQG V + + VAVKK+ Q +T
Sbjct: 8 NQFYSVEVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHA 67
Query: 301 RH-------LRKLNHPNIVKFKGVCTQAPCY------CIVMEYCAYGPLYNLLKDGEEVP 347
+ L+ +NH NI+ V T +VME L ++ E+
Sbjct: 68 KRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIH--MELD 124
Query: 348 PQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMS 407
+R+ Q+ G+ +LHS IIHRDLK N+++ S KI DFG R
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTP 184
Query: 408 FAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELL 442
+ T + APEVI + +DIWS G ++ EL+
Sbjct: 185 YVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELV 219
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 94/215 (43%), Gaps = 38/215 (17%)
Query: 266 LQWLGSGAQGAVFSGKLRSEIV--AVKKVR--------EQKETDIRHLRKLNHPNIVKF- 314
+Q LG G G VF K + + A+K++R E+ +++ L KL HP IV++
Sbjct: 10 IQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYF 69
Query: 315 ----------KGVCTQAPCYC-IVMEYCAYGPLYNLLKDG---EEVPPQRLYNWARQIAA 360
K + Y I M+ C L + + EE + QIA
Sbjct: 70 NAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAE 129
Query: 361 GMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSF------------ 408
+ +LHSK ++HRDLK N+ + K+ DFG + + +
Sbjct: 130 AVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTG 189
Query: 409 -AGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELL 442
GT +M+PE I S K+DI+S G++L+ELL
Sbjct: 190 QVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 13/198 (6%)
Query: 261 ESISDLQWLGSGAQGAVFS--GKLRSEIVAVKKVREQKET---------DIRHLRKLNHP 309
E +L +G G+ G V K IVA+KK E + +I+ L++L H
Sbjct: 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHE 84
Query: 310 NIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQ 369
N+V VC + + +V E+ + L +L + Q + + QI G+ + HS
Sbjct: 85 NLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHN 144
Query: 370 IIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIRNE-QCSD 427
IIHRD+K N+L+ K+ DFG R W APE++ + +
Sbjct: 145 IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGK 204
Query: 428 KIDIWSYGIVLWELLTCE 445
+D+W+ G ++ E+ E
Sbjct: 205 AVDVWAIGCLVTEMFMGE 222
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 97/217 (44%), Gaps = 20/217 (9%)
Query: 243 RIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVRE--QKET 298
R F S + D + +L+ +GSGAQG V + + VA+KK+ Q +T
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 299 DIRH-------LRKLNHPNIVKFKGVCTQAPCY------CIVMEYCAYGPLYNLLKDGEE 345
+ ++ +NH NI+ V T IVME L +++ E
Sbjct: 66 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQ--ME 122
Query: 346 VPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTK 405
+ +R+ Q+ G+ +LHS IIHRDLK N+++ S KI DFG R
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 182
Query: 406 MSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELL 442
T + APEVI + +DIWS G ++ E++
Sbjct: 183 EPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 119/280 (42%), Gaps = 52/280 (18%)
Query: 263 ISDLQWLGSGAQGAVFSGKLRSEIVAVKKVREQ------KETDIRHLRKLNHPNIVKF-- 314
I ++ +G G G V+ GK R E VAVK +ET+I + H NI+ F
Sbjct: 39 IQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIA 98
Query: 315 ---KGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK--- 368
KG + Y ++ +Y G LY+ LK + + + A +G+ +LH++
Sbjct: 99 ADIKGTGSWTQLY-LITDYHENGSLYDYLKS-TTLDAKSMLKLAYSSVSGLCHLHTEIFS 156
Query: 369 -----QIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSF-----AGTVAWMAPE 418
I HRDLKS N+L+ I+D G ++ + + ++ GT +M PE
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPE 216
Query: 419 VI-----RNE-QCSDKIDIWSYGIVLWE--------------------LLTCETPYKDVD 452
V+ RN Q D++S+G++LWE L+ + Y+D+
Sbjct: 217 VLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMR 276
Query: 453 SSAIIWGVGSSSLHLPIPSTCPDGFQLLMKMCWSNAPSSR 492
I + S + C LM CW++ P+SR
Sbjct: 277 EIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASR 316
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 6/152 (3%)
Query: 308 HPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHS 367
HPNIVK V +VME G L+ +K + R++ + ++++H
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHD 124
Query: 368 KQIIHRDLKSPNVLIGSKE---EAKISDFGTCR--EWNNKSTKMSFAGTVAWMAPEVIRN 422
++HRDLK N+L + E KI DFG R +N+ K T+ + APE++
Sbjct: 125 VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTP-CFTLHYAAPELLNQ 183
Query: 423 EQCSDKIDIWSYGIVLWELLTCETPYKDVDSS 454
+ D+WS G++L+ +L+ + P++ D S
Sbjct: 184 NGYDESCDLWSLGVILYTMLSGQVPFQSHDRS 215
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 263 ISDLQWLGSGAQGAVFSGKLRSEIVAVKKVREQ------KETDIRHLRKLNHPNIVKF-- 314
++ ++ +G G G V+ G E VAVK + +ET+I + L H NI+ F
Sbjct: 10 VALVECVGKGRYGEVWRGLWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIA 69
Query: 315 -----KGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK- 368
+ TQ ++ Y +G LY+ L+ + + P A A G+ +LH +
Sbjct: 70 SDMTSRNSSTQ---LWLITHYHEHGSLYDFLQR-QTLEPHLALRLAVSAACGLAHLHVEI 125
Query: 369 -------QIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFA-----GTVAWMA 416
I HRD KS NVL+ S + I+D G + S + GT +MA
Sbjct: 126 FGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMA 185
Query: 417 PEVIRNEQCSDKI------DIWSYGIVLWEL 441
PEV+ + +D DIW++G+VLWE+
Sbjct: 186 PEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 97/217 (44%), Gaps = 20/217 (9%)
Query: 243 RIGEFKSFVLRDEWEIPFESISDLQWLGSGAQGAVFSG--KLRSEIVAVKKVRE--QKET 298
R F S + D + +L+ +GSGAQG V + + VA+KK+ Q +T
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 299 DIRH-------LRKLNHPNIVKFKGVCTQAPCY------CIVMEYCAYGPLYNLLKDGEE 345
+ ++ +NH NI+ V T IVME L +++ E
Sbjct: 66 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQ--ME 122
Query: 346 VPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTK 405
+ +R+ Q+ G+ +LHS IIHRDLK N+++ S KI DFG R
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 182
Query: 406 MSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELL 442
T + APEVI + +D+WS G ++ E++
Sbjct: 183 EPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMV 219
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 19/205 (9%)
Query: 266 LQWLGSGAQGAVFSGKLRS--EIVAVKKVR-----EQKET-------DIRHLRKLNHPNI 311
L +LG G V+ + ++ +IVA+KK++ E K+ +I+ L++L+HPNI
Sbjct: 15 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNI 74
Query: 312 VKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEV-PPQRLYNWARQIAAGMNYLHSKQI 370
+ +V ++ L ++KD V P + + G+ YLH I
Sbjct: 75 IGLLDAFGHKSNISLVFDFMETD-LEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWI 133
Query: 371 IHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWM-APEVIRNEQCSD-K 428
+HRDLK N+L+ K++DFG + + + + W APE++ +
Sbjct: 134 LHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYGVG 193
Query: 429 IDIWSYGIVLWELLTCETPYKDVDS 453
+D+W+ G +L ELL P+ DS
Sbjct: 194 VDMWAVGCILAELL-LRVPFLPGDS 217
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 102/213 (47%), Gaps = 40/213 (18%)
Query: 263 ISDLQWLGSGAQGAVFSGKLRSEIVAVK--KVREQK----ETDIRHLRKLNHPNIVKF-- 314
I+ L+ +G G G V+ G + E VAVK R++K ET++ + L H NI+ F
Sbjct: 10 ITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIA 69
Query: 315 -----KGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAGMNYLHS 367
+ TQ ++ Y G LY+ L+ + V R+ IA+G+ +LH
Sbjct: 70 SDMTSRHSSTQ---LWLITHYHEMGSLYDYLQLTTLDTVSCLRI---VLSIASGLAHLHI 123
Query: 368 K--------QIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFA-----GTVAW 414
+ I HRDLKS N+L+ + I+D G + + ++ GT +
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRY 183
Query: 415 MAPEVIRNE---QCSD---KIDIWSYGIVLWEL 441
MAPEV+ C D ++DIW++G+VLWE+
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 102/213 (47%), Gaps = 40/213 (18%)
Query: 263 ISDLQWLGSGAQGAVFSGKLRSEIVAVK--KVREQK----ETDIRHLRKLNHPNIVKF-- 314
I+ L+ +G G G V+ G + E VAVK R++K ET++ + L H NI+ F
Sbjct: 39 ITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIA 98
Query: 315 -----KGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAGMNYLHS 367
+ TQ ++ Y G LY+ L+ + V R+ IA+G+ +LH
Sbjct: 99 SDMTSRHSSTQ---LWLITHYHEMGSLYDYLQLTTLDTVSCLRI---VLSIASGLAHLHI 152
Query: 368 K--------QIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFA-----GTVAW 414
+ I HRDLKS N+L+ + I+D G + + ++ GT +
Sbjct: 153 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRY 212
Query: 415 MAPEVIRNE---QCSD---KIDIWSYGIVLWEL 441
MAPEV+ C D ++DIW++G+VLWE+
Sbjct: 213 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 102/213 (47%), Gaps = 40/213 (18%)
Query: 263 ISDLQWLGSGAQGAVFSGKLRSEIVAVK--KVREQK----ETDIRHLRKLNHPNIVKF-- 314
I+ L+ +G G G V+ G + E VAVK R++K ET++ + L H NI+ F
Sbjct: 10 ITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIA 69
Query: 315 -----KGVCTQAPCYCIVMEYCAYGPLYNLLK--DGEEVPPQRLYNWARQIAAGMNYLHS 367
+ TQ ++ Y G LY+ L+ + V R+ IA+G+ +LH
Sbjct: 70 SDMTSRHSSTQ---LWLITHYHEMGSLYDYLQLTTLDTVSCLRI---VLSIASGLAHLHI 123
Query: 368 K--------QIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFA-----GTVAW 414
+ I HRDLKS N+L+ + I+D G + + ++ GT +
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRY 183
Query: 415 MAPEVIRNE---QCSD---KIDIWSYGIVLWEL 441
MAPEV+ C D ++DIW++G+VLWE+
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 8/173 (4%)
Query: 303 LRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGM 362
LR HPNI+ K V +V E G L + + + + I +
Sbjct: 70 LRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTV 129
Query: 363 NYLHSKQIIHRDLKSPNVLI----GSKEEAKISDFGTCREWNNKSTKMSF-AGTVAWMAP 417
YLH++ ++HRDLK N+L G+ E +I DFG ++ ++ + T ++AP
Sbjct: 130 EYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAP 189
Query: 418 EVIRNEQCSDKIDIWSYGIVLWELLTCETPYK---DVDSSAIIWGVGSSSLHL 467
EV+ + DIWS G++L+ LT TP+ D I+ +GS L
Sbjct: 190 EVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSL 242
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 17/104 (16%)
Query: 180 GSKEEAKISDFGTCREWNNKSTKMSF-AGTVAWMAPEVIRNEQCSDKIDIWYKNRLCF-- 236
G+ E +I DFG ++ ++ + T ++APEV+ + DIW L +
Sbjct: 154 GNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTX 213
Query: 237 --------------PTSLMARIGEFKSFVLRDEWEIPFESISDL 266
P ++ARIG K + W ++ DL
Sbjct: 214 LTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDL 257
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 15/194 (7%)
Query: 264 SDLQWLGSGAQGAVFSGKL-RSEIVAVKKVREQKETDIRHL---RKLNHPNIVKFK---- 315
++ + +G+G+ G VF KL S+ VA+KKV + K R L R + HPN+V K
Sbjct: 43 TNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFFY 102
Query: 316 --GVCTQAPCYCIVMEYC---AYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQI 370
G +V+EY Y + K + +P + + Q+ + Y+HS I
Sbjct: 103 SNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGI 162
Query: 371 IHRDLKSPNVLIGSKEEA-KISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRN-EQCSDK 428
HRD+K N+L+ K+ DFG+ + +S + + APE+I +
Sbjct: 163 CHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFGATNYTTN 222
Query: 429 IDIWSYGIVLWELL 442
IDIWS G V+ EL+
Sbjct: 223 IDIWSTGCVMAELM 236
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 36/205 (17%)
Query: 269 LGSGAQGAVFSGKLRSEIVAVK--KVREQK----ETDIRHLRKLNHPNIVKF-------K 315
+G G G V+ GK R E VAVK RE++ E +I L H NI+ F
Sbjct: 50 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 109
Query: 316 GVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK------- 368
G TQ +V +Y +G L++ L + V + + A A+G+ +LH +
Sbjct: 110 GTWTQ---LWLVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 165
Query: 369 -QIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFA-----GTVAWMAPEVI-- 420
I HRDLKS N+L+ I+D G ++ + + A GT +MAPEV+
Sbjct: 166 PAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDD 225
Query: 421 ----RNEQCSDKIDIWSYGIVLWEL 441
++ + + DI++ G+V WE+
Sbjct: 226 SINMKHFESFKRADIYAMGLVFWEI 250
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 36/205 (17%)
Query: 269 LGSGAQGAVFSGKLRSEIVAVK--KVREQK----ETDIRHLRKLNHPNIVKF-------K 315
+G G G V+ GK R E VAVK RE++ E +I L H NI+ F
Sbjct: 37 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 96
Query: 316 GVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK------- 368
G TQ +V +Y +G L++ L + V + + A A+G+ +LH +
Sbjct: 97 GTWTQ---LWLVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 152
Query: 369 -QIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFA-----GTVAWMAPEVI-- 420
I HRDLKS N+L+ I+D G ++ + + A GT +MAPEV+
Sbjct: 153 PAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDD 212
Query: 421 ----RNEQCSDKIDIWSYGIVLWEL 441
++ + + DI++ G+V WE+
Sbjct: 213 SINMKHFESFKRADIYAMGLVFWEI 237
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 36/205 (17%)
Query: 269 LGSGAQGAVFSGKLRSEIVAVK--KVREQK----ETDIRHLRKLNHPNIVKF-------K 315
+G G G V+ GK R E VAVK RE++ E +I L H NI+ F
Sbjct: 12 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 71
Query: 316 GVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK------- 368
G TQ +V +Y +G L++ L + V + + A A+G+ +LH +
Sbjct: 72 GTWTQ---LWLVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 127
Query: 369 -QIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFA-----GTVAWMAPEVI-- 420
I HRDLKS N+L+ I+D G ++ + + A GT +MAPEV+
Sbjct: 128 PAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDD 187
Query: 421 ----RNEQCSDKIDIWSYGIVLWEL 441
++ + + DI++ G+V WE+
Sbjct: 188 SINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 36/205 (17%)
Query: 269 LGSGAQGAVFSGKLRSEIVAVK--KVREQK----ETDIRHLRKLNHPNIVKF-------K 315
+G G G V+ GK R E VAVK RE++ E +I L H NI+ F
Sbjct: 11 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 70
Query: 316 GVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK------- 368
G TQ +V +Y +G L++ L + V + + A A+G+ +LH +
Sbjct: 71 GTWTQ---LWLVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 126
Query: 369 -QIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFA-----GTVAWMAPEVI-- 420
I HRDLKS N+L+ I+D G ++ + + A GT +MAPEV+
Sbjct: 127 PAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDD 186
Query: 421 ----RNEQCSDKIDIWSYGIVLWEL 441
++ + + DI++ G+V WE+
Sbjct: 187 SINMKHFESFKRADIYAMGLVFWEI 211
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 36/205 (17%)
Query: 269 LGSGAQGAVFSGKLRSEIVAVK--KVREQK----ETDIRHLRKLNHPNIVKF-------K 315
+G G G V+ GK R E VAVK RE++ E +I L H NI+ F
Sbjct: 14 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 73
Query: 316 GVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK------- 368
G TQ +V +Y +G L++ L + V + + A A+G+ +LH +
Sbjct: 74 GTWTQ---LWLVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 129
Query: 369 -QIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFA-----GTVAWMAPEVI-- 420
I HRDLKS N+L+ I+D G ++ + + A GT +MAPEV+
Sbjct: 130 PAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDD 189
Query: 421 ----RNEQCSDKIDIWSYGIVLWEL 441
++ + + DI++ G+V WE+
Sbjct: 190 SINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 36/205 (17%)
Query: 269 LGSGAQGAVFSGKLRSEIVAVK--KVREQK----ETDIRHLRKLNHPNIVKF-------K 315
+G G G V+ GK R E VAVK RE++ E +I L H NI+ F
Sbjct: 17 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 76
Query: 316 GVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK------- 368
G TQ +V +Y +G L++ L + V + + A A+G+ +LH +
Sbjct: 77 GTWTQ---LWLVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 132
Query: 369 -QIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFA-----GTVAWMAPEVI-- 420
I HRDLKS N+L+ I+D G ++ + + A GT +MAPEV+
Sbjct: 133 PAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDD 192
Query: 421 ----RNEQCSDKIDIWSYGIVLWEL 441
++ + + DI++ G+V WE+
Sbjct: 193 SINMKHFESFKRADIYAMGLVFWEI 217
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 122/259 (47%), Gaps = 41/259 (15%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVKKVREQKETDIRHLRKLNHPN-------IVKFKGVCT 319
LGSG G+V+SG S+ VA+K V + + +D L PN +V K V +
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL-----PNGTRVPMEVVLLKKVSS 69
Query: 320 QAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNW-----------AR----QIAAGMNY 364
++++ + L+ + E P Q L+++ AR Q+ + +
Sbjct: 70 GFSGVIRLLDWFERPDSFVLILERPE-PVQDLFDFITERGALQEELARSFFWQVLEAVRH 128
Query: 365 LHSKQIIHRDLKSPNVLIG-SKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNE 423
H+ ++HRD+K N+LI ++ E K+ DFG+ + + F GT + PE IR
Sbjct: 129 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYH 187
Query: 424 QCSDK-IDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMK 482
+ + +WS GI+L++++ + P++ D I G + S C Q L++
Sbjct: 188 RYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEII---RGQVFFRQRVSSEC----QHLIR 239
Query: 483 MCWSNAPSSRPSFKQILSH 501
C + PS RP+F++I +H
Sbjct: 240 WCLALRPSDRPTFEEIQNH 258
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 102/222 (45%), Gaps = 35/222 (15%)
Query: 254 DEWEIPF----ESISDLQWLGSGAQGAVFSGKLR--SEIVAVKKVREQKETD-------- 299
D E PF L +G G G VF + R + VA+KKV + E +
Sbjct: 7 DSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR 66
Query: 300 -IRHLRKLNHPNIVKFKGVC-TQAPCY--C-----IVMEYCAY---GPLYNLLKDGEEVP 347
I+ L+ L H N+V +C T+A Y C +V ++C + G L N+L
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE 126
Query: 348 PQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREW----NNKS 403
+R+ + + G+ Y+H +I+HRD+K+ NVLI K++DFG R + N++
Sbjct: 127 IKRV---MQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQP 183
Query: 404 TKMSFAGTVAWM-APEVIRNEQ-CSDKIDIWSYGIVLWELLT 443
+ W PE++ E+ ID+W G ++ E+ T
Sbjct: 184 NRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 102/222 (45%), Gaps = 35/222 (15%)
Query: 254 DEWEIPF----ESISDLQWLGSGAQGAVFSGKLR--SEIVAVKKVREQKETD-------- 299
D E PF L +G G G VF + R + VA+KKV + E +
Sbjct: 6 DSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR 65
Query: 300 -IRHLRKLNHPNIVKFKGVC-TQAPCY--C-----IVMEYCAY---GPLYNLLKDGEEVP 347
I+ L+ L H N+V +C T+A Y C +V ++C + G L N+L
Sbjct: 66 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE 125
Query: 348 PQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREW----NNKS 403
+R+ + + G+ Y+H +I+HRD+K+ NVLI K++DFG R + N++
Sbjct: 126 IKRV---MQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQP 182
Query: 404 TKMSFAGTVAWM-APEVIRNEQ-CSDKIDIWSYGIVLWELLT 443
+ W PE++ E+ ID+W G ++ E+ T
Sbjct: 183 NRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 122/259 (47%), Gaps = 41/259 (15%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVKKVREQKETDIRHLRKLNHPN-------IVKFKGVCT 319
LGSG G+V+SG S+ VA+K V + + +D L PN +V K V +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL-----PNGTRVPMEVVLLKKVSS 66
Query: 320 QAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNW-----------AR----QIAAGMNY 364
++++ + L+ + E P Q L+++ AR Q+ + +
Sbjct: 67 GFSGVIRLLDWFERPDSFVLILERPE-PVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 365 LHSKQIIHRDLKSPNVLIG-SKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNE 423
H+ ++HRD+K N+LI ++ E K+ DFG+ + + F GT + PE IR
Sbjct: 126 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYH 184
Query: 424 QCSDK-IDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMK 482
+ + +WS GI+L++++ + P++ D I G + S C Q L++
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEII---RGQVFFRQRVSSEC----QHLIR 236
Query: 483 MCWSNAPSSRPSFKQILSH 501
C + PS RP+F++I +H
Sbjct: 237 WCLALRPSDRPTFEEIQNH 255
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 10/162 (6%)
Query: 295 QKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPL-YNLLK--DGEEVPPQRL 351
++E I H+ L HP+IV+ + +V E+ L + ++K D V + +
Sbjct: 76 KREASICHM--LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAV 133
Query: 352 Y-NWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEA---KISDFGTCREWNNKS-TKM 406
++ RQI + Y H IIHRD+K VL+ SKE + K+ FG +
Sbjct: 134 ASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAG 193
Query: 407 SFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
GT +MAPEV++ E +D+W G++L+ LL+ P+
Sbjct: 194 GRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 235
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Query: 177 VLIGSKEEA---KISDFGTCREWNNKS-TKMSFAGTVAWMAPEVIRNEQCSDKIDIWYKN 232
VL+ SKE + K+ FG + GT +MAPEV++ E +D+W
Sbjct: 163 VLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCG 222
Query: 233 RLCF 236
+ F
Sbjct: 223 VILF 226
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 122/259 (47%), Gaps = 41/259 (15%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVKKVREQKETDIRHLRKLNHPN-------IVKFKGVCT 319
LGSG G+V+SG S+ VA+K V + + +D L PN +V K V +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL-----PNGTRVPMEVVLLKKVSS 66
Query: 320 QAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNW-----------AR----QIAAGMNY 364
++++ + L+ + E P Q L+++ AR Q+ + +
Sbjct: 67 GFSGVIRLLDWFERPDSFVLILERPE-PVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 365 LHSKQIIHRDLKSPNVLIG-SKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNE 423
H+ ++HRD+K N+LI ++ E K+ DFG+ + + F GT + PE IR
Sbjct: 126 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYH 184
Query: 424 QCSDK-IDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMK 482
+ + +WS GI+L++++ + P++ D I G + S C Q L++
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEII---GGQVFFRQRVSSEC----QHLIR 236
Query: 483 MCWSNAPSSRPSFKQILSH 501
C + PS RP+F++I +H
Sbjct: 237 WCLALRPSDRPTFEEIQNH 255
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 122/259 (47%), Gaps = 41/259 (15%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVKKVREQKETDIRHLRKLNHPN-------IVKFKGVCT 319
LGSG G+V+SG S+ VA+K V + + +D L PN +V K V +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL-----PNGTRVPMEVVLLKKVSS 70
Query: 320 QAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNW-----------AR----QIAAGMNY 364
++++ + L+ + E P Q L+++ AR Q+ + +
Sbjct: 71 GFSGVIRLLDWFERPDSFVLILERPE-PVQDLFDFITERGALQEELARSFFWQVLEAVRH 129
Query: 365 LHSKQIIHRDLKSPNVLIG-SKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNE 423
H+ ++HRD+K N+LI ++ E K+ DFG+ + + F GT + PE IR
Sbjct: 130 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYH 188
Query: 424 QCSDK-IDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMK 482
+ + +WS GI+L++++ + P++ D I G + S C Q L++
Sbjct: 189 RYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEII---RGQVFFRQRVSSEC----QHLIR 240
Query: 483 MCWSNAPSSRPSFKQILSH 501
C + PS RP+F++I +H
Sbjct: 241 WCLALRPSDRPTFEEIQNH 259
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 326 IVMEYCAYGPLYNLLKDGEEVPPQRLYN-WARQIAAGMNYLHSKQIIHRDLKSPNVLIGS 384
+VM+Y G L LL E+ P+ + + ++ ++ +H +HRD+K NVL+
Sbjct: 151 LVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDV 210
Query: 385 KEEAKISDFGTCREWNNKSTKMS--FAGTVAWMAPEVIRNEQ-----CSDKIDIWSYGIV 437
+++DFG+C + N+ T S GT +++PE+++ + + D WS G+
Sbjct: 211 NGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVC 270
Query: 438 LWELLTCETPY 448
++E+L ETP+
Sbjct: 271 MYEMLYGETPF 281
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 10/162 (6%)
Query: 295 QKETDIRHLRKLNHPNIVKFKGVCTQAPCYCIVMEYCAYGPL-YNLLK--DGEEVPPQRL 351
++E I H+ L HP+IV+ + +V E+ L + ++K D V + +
Sbjct: 74 KREASICHM--LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAV 131
Query: 352 Y-NWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEA---KISDFGTCREWNNKS-TKM 406
++ RQI + Y H IIHRD+K VL+ SKE + K+ FG +
Sbjct: 132 ASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAG 191
Query: 407 SFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPY 448
GT +MAPEV++ E +D+W G++L+ LL+ P+
Sbjct: 192 GRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Query: 177 VLIGSKEEA---KISDFGTCREWNNKS-TKMSFAGTVAWMAPEVIRNEQCSDKIDIW 229
VL+ SKE + K+ FG + GT +MAPEV++ E +D+W
Sbjct: 161 VLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVW 217
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 122/259 (47%), Gaps = 41/259 (15%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVKKVREQKETDIRHLRKLNHPN-------IVKFKGVCT 319
LGSG G+V+SG S+ VA+K V + + +D L PN +V K V +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL-----PNGTRVPMEVVLLKKVSS 71
Query: 320 QAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNW-----------AR----QIAAGMNY 364
++++ + L+ + E P Q L+++ AR Q+ + +
Sbjct: 72 GFSGVIRLLDWFERPDSFVLILERPE-PVQDLFDFITERGALQEELARSFFWQVLEAVRH 130
Query: 365 LHSKQIIHRDLKSPNVLIG-SKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNE 423
H+ ++HRD+K N+LI ++ E K+ DFG+ + + F GT + PE IR
Sbjct: 131 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYH 189
Query: 424 QCSDK-IDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMK 482
+ + +WS GI+L++++ + P++ D I G + S C Q L++
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEII---RGQVFFRQRVSSEC----QHLIR 241
Query: 483 MCWSNAPSSRPSFKQILSH 501
C + PS RP+F++I +H
Sbjct: 242 WCLALRPSDRPTFEEIQNH 260
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 16/158 (10%)
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNK-------------S 403
QIA + +LHSK ++HRDLK N+ + K+ DFG + +
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 231
Query: 404 TKMSFAGTVAWMAPEVIRNEQCSDKIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSS 463
T GT +M+PE I S K+DI+S G++L+ELL + ++ II V +
Sbjct: 232 THXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFS--TQMERVRIITDVRNL 289
Query: 464 SLHLPIPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSH 501
L P ++ M S +P+ RP I+ +
Sbjct: 290 KFPLLFTQKYPQEHMMVQDML-SPSPTERPEATDIIEN 326
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 10/67 (14%)
Query: 266 LQWLGSGAQGAVFSGKLRSEI--VAVKKVR--------EQKETDIRHLRKLNHPNIVKFK 315
+Q +G G G VF K + + A+K++R E+ +++ L KL HP IV++
Sbjct: 11 IQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYF 70
Query: 316 GVCTQAP 322
+ P
Sbjct: 71 NAWLETP 77
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 122/259 (47%), Gaps = 41/259 (15%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVKKVREQKETDIRHLRKLNHPN-------IVKFKGVCT 319
LGSG G+V+SG S+ VA+K V + + +D L PN +V K V +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL-----PNGTRVPMEVVLLKKVSS 71
Query: 320 QAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNW-----------AR----QIAAGMNY 364
++++ + L+ + E P Q L+++ AR Q+ + +
Sbjct: 72 GFSGVIRLLDWFERPDSFVLILERPE-PVQDLFDFITERGALQEELARSFFWQVLEAVRH 130
Query: 365 LHSKQIIHRDLKSPNVLIG-SKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNE 423
H+ ++HRD+K N+LI ++ E K+ DFG+ + + F GT + PE IR
Sbjct: 131 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYH 189
Query: 424 QCSDK-IDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMK 482
+ + +WS GI+L++++ + P++ D I G + S C Q L++
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEII---RGQVFFRQRVSSEC----QHLIR 241
Query: 483 MCWSNAPSSRPSFKQILSH 501
C + PS RP+F++I +H
Sbjct: 242 WCLALRPSDRPTFEEIQNH 260
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 326 IVMEYCAYGPLYNLLKDGEEVPPQRLYN-WARQIAAGMNYLHSKQIIHRDLKSPNVLIGS 384
+VM+Y G L LL E+ P+ + + ++ ++ +H +HRD+K NVL+
Sbjct: 167 LVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDV 226
Query: 385 KEEAKISDFGTCREWNNKSTKMS--FAGTVAWMAPEVIRNEQ-----CSDKIDIWSYGIV 437
+++DFG+C + N+ T S GT +++PE+++ + + D WS G+
Sbjct: 227 NGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVC 286
Query: 438 LWELLTCETPY 448
++E+L ETP+
Sbjct: 287 MYEMLYGETPF 297
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 122/259 (47%), Gaps = 41/259 (15%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVKKVREQKETDIRHLRKLNHPN-------IVKFKGVCT 319
LGSG G+V+SG S+ VA+K V + + +D L PN +V K V +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL-----PNGTRVPMEVVLLKKVSS 70
Query: 320 QAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNW-----------AR----QIAAGMNY 364
++++ + L+ + E P Q L+++ AR Q+ + +
Sbjct: 71 GFSGVIRLLDWFERPDSFVLILERME-PVQDLFDFITERGALQEELARSFFWQVLEAVRH 129
Query: 365 LHSKQIIHRDLKSPNVLIG-SKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNE 423
H+ ++HRD+K N+LI ++ E K+ DFG+ + + F GT + PE IR
Sbjct: 130 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYH 188
Query: 424 QCSDK-IDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMK 482
+ + +WS GI+L++++ + P++ D I G + S C Q L++
Sbjct: 189 RYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEII---RGQVFFRQRVSSEC----QHLIR 240
Query: 483 MCWSNAPSSRPSFKQILSH 501
C + PS RP+F++I +H
Sbjct: 241 WCLALRPSDRPTFEEIQNH 259
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 102/222 (45%), Gaps = 35/222 (15%)
Query: 254 DEWEIPF----ESISDLQWLGSGAQGAVFSGKLR--SEIVAVKKVREQKETD-------- 299
D E PF L +G G G VF + R + VA+KKV + E +
Sbjct: 7 DSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR 66
Query: 300 -IRHLRKLNHPNIVKFKGVC-TQAPCY--C-----IVMEYCAY---GPLYNLLKDGEEVP 347
I+ L+ L H N+V +C T+A Y C +V ++C + G L N+L
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSE 126
Query: 348 PQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREW----NNKS 403
+R+ + + G+ Y+H +I+HRD+K+ NVLI K++DFG R + N++
Sbjct: 127 IKRV---MQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQP 183
Query: 404 TKMSFAGTVAWM-APEVIRNEQ-CSDKIDIWSYGIVLWELLT 443
+ W PE++ E+ ID+W G ++ E+ T
Sbjct: 184 NRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 121/259 (46%), Gaps = 41/259 (15%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVKKVREQKETDIRHLRKLNHPN-------IVKFKGVCT 319
LGSG G+V+SG S+ VA+K V + + +D L PN +V K V +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL-----PNGTRVPMEVVLLKKVSS 66
Query: 320 QAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNW-----------AR----QIAAGMNY 364
++++ + L+ + E P Q L+++ AR Q+ + +
Sbjct: 67 GFSGVIRLLDWFERPDSFVLILERPE-PVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 365 LHSKQIIHRDLKSPNVLIG-SKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNE 423
H+ ++HRD+K N+LI ++ E K+ DFG+ + + F GT + PE IR
Sbjct: 126 CHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYH 184
Query: 424 QCSDK-IDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMK 482
+ + +WS GI+L++++ + P++ D I G + C Q L++
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEII---RGQVFFRQRVSXEC----QHLIR 236
Query: 483 MCWSNAPSSRPSFKQILSH 501
C + PS RP+F++I +H
Sbjct: 237 WCLALRPSDRPTFEEIQNH 255
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 124/293 (42%), Gaps = 35/293 (11%)
Query: 264 SDLQWLGSGAQGAVFSG-KLRSEIVAVKKVR---------EQKETDIRHLRKLNHPN--I 311
S L+ +GSG VF + +I A+K V + +I +L KL + I
Sbjct: 59 SILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKI 118
Query: 312 VKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQII 371
++ +VME C L + LK + + P ++ + + ++ +H I+
Sbjct: 119 IRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIV 177
Query: 372 HRDLKSPNVLIGSKEEAKISDFGTCREWNNKST---KMSFAGTVAWMAPEVIRNEQCSDK 428
H DLK N LI K+ DFG + +T K S GTV +M PE I++ S +
Sbjct: 178 HSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRE 236
Query: 429 -----------IDIWSYGIVLWELLTCETPYKD-VDSSAIIWGVGSSSLHLPIPSTCPDG 476
D+WS G +L+ + +TP++ ++ + + + + + P
Sbjct: 237 NGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKD 296
Query: 477 FQLLMKMCWSNAPSSRPSFKQILSHLDIASQEVLRIQPEPYYKMQMIWKEEIR 529
Q ++K C P R S ++L+H ++IQ P +M EE++
Sbjct: 297 LQDVLKCCLKRDPKQRISIPELLAH------PYVQIQTHPVNQMAKGTTEEMK 343
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 124/293 (42%), Gaps = 35/293 (11%)
Query: 264 SDLQWLGSGAQGAVFSG-KLRSEIVAVKKVR---------EQKETDIRHLRKLNHPN--I 311
S L+ +GSG VF + +I A+K V + +I +L KL + I
Sbjct: 12 SILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKI 71
Query: 312 VKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQII 371
++ +VME C L + LK + + P ++ + + ++ +H I+
Sbjct: 72 IRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIV 130
Query: 372 HRDLKSPNVLIGSKEEAKISDFGTCREWNNKST---KMSFAGTVAWMAPEVIRNEQCSDK 428
H DLK N LI K+ DFG + +T K S GTV +M PE I++ S +
Sbjct: 131 HSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRE 189
Query: 429 -----------IDIWSYGIVLWELLTCETPYKD-VDSSAIIWGVGSSSLHLPIPSTCPDG 476
D+WS G +L+ + +TP++ ++ + + + + + P
Sbjct: 190 NGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKD 249
Query: 477 FQLLMKMCWSNAPSSRPSFKQILSHLDIASQEVLRIQPEPYYKMQMIWKEEIR 529
Q ++K C P R S ++L+H ++IQ P +M EE++
Sbjct: 250 LQDVLKCCLKRDPKQRISIPELLAH------PYVQIQTHPVNQMAKGTTEEMK 296
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 102/222 (45%), Gaps = 35/222 (15%)
Query: 254 DEWEIPF----ESISDLQWLGSGAQGAVFSGKLR--SEIVAVKKVREQKETD-------- 299
D E PF L +G G G VF + R + VA+KKV + E +
Sbjct: 7 DSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR 66
Query: 300 -IRHLRKLNHPNIVKFKGVC-TQAPCY--C-----IVMEYCAY---GPLYNLLKDGEEVP 347
I+ L+ L H N+V +C T+A Y C +V ++C + G L N+L
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE 126
Query: 348 PQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREW----NNKS 403
+R+ + + G+ Y+H +I+HRD+K+ NVLI K++DFG R + N++
Sbjct: 127 IKRV---MQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQP 183
Query: 404 TKMSFAGTVAWM-APEVIRNEQ-CSDKIDIWSYGIVLWELLT 443
+ W PE++ E+ ID+W G ++ E+ T
Sbjct: 184 NRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 122/259 (47%), Gaps = 41/259 (15%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVKKVREQKETDIRHLRKLNHPN-------IVKFKGVCT 319
LGSG G+V+SG S+ VA+K V + + +D L PN +V K V +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL-----PNGTRVPMEVVLLKKVSS 71
Query: 320 QAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNW-----------AR----QIAAGMNY 364
++++ + L+ + E P Q L+++ AR Q+ + +
Sbjct: 72 GFSGVIRLLDWFERPDSFVLILERPE-PVQDLFDFITERGALQEELARSFFWQVLEAVRH 130
Query: 365 LHSKQIIHRDLKSPNVLIG-SKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNE 423
H+ ++HRD+K N+LI ++ E K+ DFG+ + + F GT + PE IR
Sbjct: 131 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYH 189
Query: 424 QCSDK-IDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMK 482
+ + +WS GI+L++++ + P++ D I G + S C Q L++
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEII---RGQVFFRQRVSSEC----QHLIR 241
Query: 483 MCWSNAPSSRPSFKQILSH 501
C + PS RP+F++I +H
Sbjct: 242 WCLALRPSDRPTFEEIQNH 260
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 93/210 (44%), Gaps = 30/210 (14%)
Query: 272 GAQGAVFSGKLRSEIVAVK------KVREQKETDIRHLRKLNHPNIVKFKGVCTQAPCYC 325
G G V+ +L +E VAVK K Q E ++ L + H NI++F G +
Sbjct: 35 GRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVD 94
Query: 326 I----VMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSK----------QII 371
+ + + G L + LK V L + A +A G+ YLH I
Sbjct: 95 VDLWLITAFHEKGSLSDFLK-ANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAIS 153
Query: 372 HRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVA---WMAPEVIRN-----E 423
HRD+KS NVL+ + A I+DFG ++ + G V +MAPEV+
Sbjct: 154 HRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQR 213
Query: 424 QCSDKIDIWSYGIVLWELLT-CETPYKDVD 452
+ID+++ G+VLWEL + C VD
Sbjct: 214 DAFLRIDMYAMGLVLWELASRCTAADGPVD 243
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 15/213 (7%)
Query: 251 VLRDEWEIPFESISDLQWLGSGAQGAV--FSGKLRSEIVAVKKVREQK---ETDIRHLRK 305
V + ++ F+ L+ +G G+ G V ++ A+K + +QK ++R++ K
Sbjct: 5 VFDENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFK 64
Query: 306 -------LNHPNIVKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQI 358
L HP +V +V++ G L L+ + + + ++
Sbjct: 65 ELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICEL 124
Query: 359 AAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPE 418
++YL +++IIHRD+K N+L+ I+DF ++ + AGT +MAPE
Sbjct: 125 VMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPE 184
Query: 419 VIRNEQC---SDKIDIWSYGIVLWELLTCETPY 448
+ + + S +D WS G+ +ELL PY
Sbjct: 185 MFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPY 217
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 124/293 (42%), Gaps = 35/293 (11%)
Query: 264 SDLQWLGSGAQGAVFSG-KLRSEIVAVKKVR---------EQKETDIRHLRKLNHPN--I 311
S L+ +GSG VF + +I A+K V + +I +L KL + I
Sbjct: 15 SILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKI 74
Query: 312 VKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQII 371
++ +VME C L + LK + + P ++ + + ++ +H I+
Sbjct: 75 IRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIV 133
Query: 372 HRDLKSPNVLIGSKEEAKISDFGTCREWNNKST---KMSFAGTVAWMAPEVIRNEQCSDK 428
H DLK N LI K+ DFG + +T K S GTV +M PE I++ S +
Sbjct: 134 HSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRE 192
Query: 429 -----------IDIWSYGIVLWELLTCETPYKD-VDSSAIIWGVGSSSLHLPIPSTCPDG 476
D+WS G +L+ + +TP++ ++ + + + + + P
Sbjct: 193 NGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKD 252
Query: 477 FQLLMKMCWSNAPSSRPSFKQILSHLDIASQEVLRIQPEPYYKMQMIWKEEIR 529
Q ++K C P R S ++L+H ++IQ P +M EE++
Sbjct: 253 LQDVLKCCLKRDPKQRISIPELLAH------PYVQIQTHPVNQMAKGTTEEMK 299
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 124/293 (42%), Gaps = 35/293 (11%)
Query: 264 SDLQWLGSGAQGAVFSG-KLRSEIVAVKKVR---------EQKETDIRHLRKLNHPN--I 311
S L+ +GSG VF + +I A+K V + +I +L KL + I
Sbjct: 11 SILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKI 70
Query: 312 VKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQII 371
++ +VME C L + LK + + P ++ + + ++ +H I+
Sbjct: 71 IRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIV 129
Query: 372 HRDLKSPNVLIGSKEEAKISDFGTCREWNNKST---KMSFAGTVAWMAPEVIRNEQCSDK 428
H DLK N LI K+ DFG + +T K S GTV +M PE I++ S +
Sbjct: 130 HSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRE 188
Query: 429 -----------IDIWSYGIVLWELLTCETPYKD-VDSSAIIWGVGSSSLHLPIPSTCPDG 476
D+WS G +L+ + +TP++ ++ + + + + + P
Sbjct: 189 NGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKD 248
Query: 477 FQLLMKMCWSNAPSSRPSFKQILSHLDIASQEVLRIQPEPYYKMQMIWKEEIR 529
Q ++K C P R S ++L+H ++IQ P +M EE++
Sbjct: 249 LQDVLKCCLKRDPKQRISIPELLAH------PYVQIQTHPVNQMAKGTTEEMK 295
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 122/259 (47%), Gaps = 41/259 (15%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVKKVREQKETDIRHLRKLNHPN-------IVKFKGVCT 319
LGSG G+V+SG S+ VA+K V + + +D L PN +V K V +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL-----PNGTRVPMEVVLLKKVSS 113
Query: 320 QAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNW-----------AR----QIAAGMNY 364
++++ + L+ + E P Q L+++ AR Q+ + +
Sbjct: 114 GFSGVIRLLDWFERPDSFVLILERPE-PVQDLFDFITERGALQEELARSFFWQVLEAVRH 172
Query: 365 LHSKQIIHRDLKSPNVLIG-SKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNE 423
H+ ++HRD+K N+LI ++ E K+ DFG+ + + F GT + PE IR
Sbjct: 173 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYH 231
Query: 424 QCSDK-IDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMK 482
+ + +WS GI+L++++ + P++ D I G + S C Q L++
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEII---RGQVFFRQRVSSEC----QHLIR 283
Query: 483 MCWSNAPSSRPSFKQILSH 501
C + PS RP+F++I +H
Sbjct: 284 WCLALRPSDRPTFEEIQNH 302
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 123/292 (42%), Gaps = 35/292 (11%)
Query: 264 SDLQWLGSGAQGAVFSG-KLRSEIVAVKKVR---------EQKETDIRHLRKLNHPN--I 311
S L+ +GSG VF + +I A+K V + +I +L KL + I
Sbjct: 59 SILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKI 118
Query: 312 VKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQII 371
++ +VME C L + LK + + P ++ + + ++ +H I+
Sbjct: 119 IRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIV 177
Query: 372 HRDLKSPNVLIGSKEEAKISDFGTCREWNNKST---KMSFAGTVAWMAPEVIRNEQCSDK 428
H DLK N LI K+ DFG + +T K S GTV +M PE I++ S +
Sbjct: 178 HSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRE 236
Query: 429 -----------IDIWSYGIVLWELLTCETPYKD-VDSSAIIWGVGSSSLHLPIPSTCPDG 476
D+WS G +L+ + +TP++ ++ + + + + + P
Sbjct: 237 NGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKD 296
Query: 477 FQLLMKMCWSNAPSSRPSFKQILSHLDIASQEVLRIQPEPYYKMQMIWKEEI 528
Q ++K C P R S ++L+H ++IQ P +M EE+
Sbjct: 297 LQDVLKCCLKRDPKQRISIPELLAH------PYVQIQTHPVNQMAKGTTEEM 342
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 326 IVMEYCAYGPLYNLL-KDGEEVPPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGS 384
+VMEY G L LL K GE +P + + +I ++ +H +HRD+K N+L+
Sbjct: 138 LVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDR 197
Query: 385 KEEAKISDFGTCREWNNKSTKMSF--AGTVAWMAPEVIR-------NEQCSDKIDIWSYG 435
+++DFG+C + T S GT +++PE+++ + D W+ G
Sbjct: 198 CGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALG 257
Query: 436 IVLWELLTCETPYKDVDSSAIIWG-VGSSSLHLPIP 470
+ +E+ +TP+ DS+A +G + HL +P
Sbjct: 258 VFAYEMFYGQTPFY-ADSTAETYGKIVHYKEHLSLP 292
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 122/259 (47%), Gaps = 41/259 (15%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVKKVREQKETDIRHLRKLNHPN-------IVKFKGVCT 319
LGSG G+V+SG S+ VA+K V + + +D L PN +V K V +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL-----PNGTRVPMEVVLLKKVSS 98
Query: 320 QAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNW-----------AR----QIAAGMNY 364
++++ + L+ + E P Q L+++ AR Q+ + +
Sbjct: 99 GFSGVIRLLDWFERPDSFVLILERPE-PVQDLFDFITERGALQEELARSFFWQVLEAVRH 157
Query: 365 LHSKQIIHRDLKSPNVLIG-SKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNE 423
H+ ++HRD+K N+LI ++ E K+ DFG+ + + F GT + PE IR
Sbjct: 158 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYH 216
Query: 424 QCSDK-IDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMK 482
+ + +WS GI+L++++ + P++ D I G + S C Q L++
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEII---RGQVFFRQRVSSEC----QHLIR 268
Query: 483 MCWSNAPSSRPSFKQILSH 501
C + PS RP+F++I +H
Sbjct: 269 WCLALRPSDRPTFEEIQNH 287
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 122/259 (47%), Gaps = 41/259 (15%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVKKVREQKETDIRHLRKLNHPN-------IVKFKGVCT 319
LGSG G+V+SG S+ VA+K V + + +D L PN +V K V +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL-----PNGTRVPMEVVLLKKVSS 85
Query: 320 QAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNW-----------AR----QIAAGMNY 364
++++ + L+ + E P Q L+++ AR Q+ + +
Sbjct: 86 GFSGVIRLLDWFERPDSFVLILERPE-PVQDLFDFITERGALQEELARSFFWQVLEAVRH 144
Query: 365 LHSKQIIHRDLKSPNVLIG-SKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNE 423
H+ ++HRD+K N+LI ++ E K+ DFG+ + + F GT + PE IR
Sbjct: 145 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYH 203
Query: 424 QCSDK-IDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMK 482
+ + +WS GI+L++++ + P++ D I G + S C Q L++
Sbjct: 204 RYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEII---RGQVFFRQRVSSEC----QHLIR 255
Query: 483 MCWSNAPSSRPSFKQILSH 501
C + PS RP+F++I +H
Sbjct: 256 WCLALRPSDRPTFEEIQNH 274
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 122/259 (47%), Gaps = 41/259 (15%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVKKVREQKETDIRHLRKLNHPN-------IVKFKGVCT 319
LGSG G+V+SG S+ VA+K V + + +D L PN +V K V +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL-----PNGTRVPMEVVLLKKVSS 86
Query: 320 QAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNW-----------AR----QIAAGMNY 364
++++ + L+ + E P Q L+++ AR Q+ + +
Sbjct: 87 GFSGVIRLLDWFERPDSFVLILERPE-PVQDLFDFITERGALQEELARSFFWQVLEAVRH 145
Query: 365 LHSKQIIHRDLKSPNVLIG-SKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNE 423
H+ ++HRD+K N+LI ++ E K+ DFG+ + + F GT + PE IR
Sbjct: 146 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYH 204
Query: 424 QCSDK-IDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMK 482
+ + +WS GI+L++++ + P++ D I G + S C Q L++
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEII---RGQVFFRQRVSSEC----QHLIR 256
Query: 483 MCWSNAPSSRPSFKQILSH 501
C + PS RP+F++I +H
Sbjct: 257 WCLALRPSDRPTFEEIQNH 275
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 122/259 (47%), Gaps = 41/259 (15%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVKKVREQKETDIRHLRKLNHPN-------IVKFKGVCT 319
LGSG G+V+SG S+ VA+K V + + +D L PN +V K V +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL-----PNGTRVPMEVVLLKKVSS 98
Query: 320 QAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNW-----------AR----QIAAGMNY 364
++++ + L+ + E P Q L+++ AR Q+ + +
Sbjct: 99 GFSGVIRLLDWFERPDSFVLILERPE-PVQDLFDFITERGALQEELARSFFWQVLEAVRH 157
Query: 365 LHSKQIIHRDLKSPNVLIG-SKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNE 423
H+ ++HRD+K N+LI ++ E K+ DFG+ + + F GT + PE IR
Sbjct: 158 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYH 216
Query: 424 QCSDK-IDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMK 482
+ + +WS GI+L++++ + P++ D I G + S C Q L++
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEII---GGQVFFRQRVSSEC----QHLIR 268
Query: 483 MCWSNAPSSRPSFKQILSH 501
C + PS RP+F++I +H
Sbjct: 269 WCLALRPSDRPTFEEIQNH 287
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 122/259 (47%), Gaps = 41/259 (15%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVKKVREQKETDIRHLRKLNHPN-------IVKFKGVCT 319
LGSG G+V+SG S+ VA+K V + + +D L PN +V K V +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL-----PNGTRVPMEVVLLKKVSS 99
Query: 320 QAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNW-----------AR----QIAAGMNY 364
++++ + L+ + E P Q L+++ AR Q+ + +
Sbjct: 100 GFSGVIRLLDWFERPDSFVLILERPE-PVQDLFDFITERGALQEELARSFFWQVLEAVRH 158
Query: 365 LHSKQIIHRDLKSPNVLIG-SKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNE 423
H+ ++HRD+K N+LI ++ E K+ DFG+ + + F GT + PE IR
Sbjct: 159 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYH 217
Query: 424 QCSDK-IDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMK 482
+ + +WS GI+L++++ + P++ D I G + S C Q L++
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEII---GGQVFFRQRVSSEC----QHLIR 269
Query: 483 MCWSNAPSSRPSFKQILSH 501
C + PS RP+F++I +H
Sbjct: 270 WCLALRPSDRPTFEEIQNH 288
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 122/259 (47%), Gaps = 41/259 (15%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVKKVREQKETDIRHLRKLNHPN-------IVKFKGVCT 319
LGSG G+V+SG S+ VA+K V + + +D L PN +V K V +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL-----PNGTRVPMEVVLLKKVSS 98
Query: 320 QAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNW-----------AR----QIAAGMNY 364
++++ + L+ + E P Q L+++ AR Q+ + +
Sbjct: 99 GFSGVIRLLDWFERPDSFVLILERPE-PVQDLFDFITERGALQEELARSFFWQVLEAVRH 157
Query: 365 LHSKQIIHRDLKSPNVLIG-SKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNE 423
H+ ++HRD+K N+LI ++ E K+ DFG+ + + F GT + PE IR
Sbjct: 158 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYH 216
Query: 424 QCSDK-IDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMK 482
+ + +WS GI+L++++ + P++ D I G + S C Q L++
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEII---GGQVFFRQRVSSEC----QHLIR 268
Query: 483 MCWSNAPSSRPSFKQILSH 501
C + PS RP+F++I +H
Sbjct: 269 WCLALRPSDRPTFEEIQNH 287
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 122/259 (47%), Gaps = 41/259 (15%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVKKVREQKETDIRHLRKLNHPN-------IVKFKGVCT 319
LGSG G+V+SG S+ VA+K V + + +D L PN +V K V +
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL-----PNGTRVPMEVVLLKKVSS 105
Query: 320 QAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNW-----------AR----QIAAGMNY 364
++++ + L+ + E P Q L+++ AR Q+ + +
Sbjct: 106 GFSGVIRLLDWFERPDSFVLILERPE-PVQDLFDFITERGALQEELARSFFWQVLEAVRH 164
Query: 365 LHSKQIIHRDLKSPNVLIG-SKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNE 423
H+ ++HRD+K N+LI ++ E K+ DFG+ + + F GT + PE IR
Sbjct: 165 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYH 223
Query: 424 QCSDK-IDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMK 482
+ + +WS GI+L++++ + P++ D I G + S C Q L++
Sbjct: 224 RYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEII---RGQVFFRQRVSSEC----QHLIR 275
Query: 483 MCWSNAPSSRPSFKQILSH 501
C + PS RP+F++I +H
Sbjct: 276 WCLALRPSDRPTFEEIQNH 294
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 122/259 (47%), Gaps = 41/259 (15%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVKKVREQKETDIRHLRKLNHPN-------IVKFKGVCT 319
LGSG G+V+SG S+ VA+K V + + +D L PN +V K V +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL-----PNGTRVPMEVVLLKKVSS 99
Query: 320 QAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNW-----------AR----QIAAGMNY 364
++++ + L+ + E P Q L+++ AR Q+ + +
Sbjct: 100 GFSGVIRLLDWFERPDSFVLILERPE-PVQDLFDFITERGALQEELARSFFWQVLEAVRH 158
Query: 365 LHSKQIIHRDLKSPNVLIG-SKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNE 423
H+ ++HRD+K N+LI ++ E K+ DFG+ + + F GT + PE IR
Sbjct: 159 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYH 217
Query: 424 QCSDK-IDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMK 482
+ + +WS GI+L++++ + P++ D I G + S C Q L++
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEII---GGQVFFRQRVSSEC----QHLIR 269
Query: 483 MCWSNAPSSRPSFKQILSH 501
C + PS RP+F++I +H
Sbjct: 270 WCLALRPSDRPTFEEIQNH 288
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 17/148 (11%)
Query: 357 QIAAGMNYLHSKQIIHRDLKSPNVLIGSKEE-AKISDFGTCREWNNKSTKMSFAGTVAWM 415
Q+ A + + HS+ ++HRD+K N+LI + AK+ DFG+ +++ F GT +
Sbjct: 147 QVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYT-DFDGTRVYS 205
Query: 416 APEVI-RNEQCSDKIDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPI---PS 471
PE I R++ + +WS GI+L++++ + P++ D + + LH P P
Sbjct: 206 PPEWISRHQYHALPATVWSLGILLYDMVCGDIPFER-DQEIL-----EAELHFPAHVSPD 259
Query: 472 TCPDGFQLLMKMCWSNAPSSRPSFKQIL 499
C L++ C + PSSRPS ++IL
Sbjct: 260 CC-----ALIRRCLAPKPSSRPSLEEIL 282
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 120/284 (42%), Gaps = 35/284 (12%)
Query: 264 SDLQWLGSGAQGAVFSG-KLRSEIVAVKKVR---------EQKETDIRHLRKLNHPN--I 311
S L+ +GSG VF + +I A+K V + +I +L KL + I
Sbjct: 31 SILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKI 90
Query: 312 VKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQII 371
++ +VME C L + LK + + P ++ + + ++ +H I+
Sbjct: 91 IRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIV 149
Query: 372 HRDLKSPNVLIGSKEEAKISDFGTCREWNNKST---KMSFAGTVAWMAPEVIRNEQCSDK 428
H DLK N LI K+ DFG + +T K S GTV +M PE I++ S +
Sbjct: 150 HSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRE 208
Query: 429 -----------IDIWSYGIVLWELLTCETPYKD-VDSSAIIWGVGSSSLHLPIPSTCPDG 476
D+WS G +L+ + +TP++ ++ + + + + + P
Sbjct: 209 NGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKD 268
Query: 477 FQLLMKMCWSNAPSSRPSFKQILSHLDIASQEVLRIQPEPYYKM 520
Q ++K C P R S ++L+H ++IQ P +M
Sbjct: 269 LQDVLKCCLKRDPKQRISIPELLAH------PYVQIQTHPVNQM 306
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 121/259 (46%), Gaps = 41/259 (15%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVKKVREQKETDIRHLRKLNHPN-------IVKFKGVCT 319
LGSG G+V+SG S+ VA+K V + + +D L PN +V K V +
Sbjct: 39 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL-----PNGTRVPMEVVLLKKVSS 93
Query: 320 QAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNW-----------AR----QIAAGMNY 364
++++ + L+ + E P Q L+++ AR Q+ + +
Sbjct: 94 GFSGVIRLLDWFERPDSFVLILERPE-PVQDLFDFITERGALQEELARSFFWQVLEAVRH 152
Query: 365 LHSKQIIHRDLKSPNVLIG-SKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNE 423
H+ ++HRD+K N+LI ++ E K+ DFG+ + + F GT + PE IR
Sbjct: 153 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYH 211
Query: 424 QCSDK-IDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMK 482
+ + +WS GI+L++++ + P++ D I G + C Q L++
Sbjct: 212 RYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEII---RGQVFFRQRVSXEC----QHLIR 263
Query: 483 MCWSNAPSSRPSFKQILSH 501
C + PS RP+F++I +H
Sbjct: 264 WCLALRPSDRPTFEEIQNH 282
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 123/293 (41%), Gaps = 35/293 (11%)
Query: 264 SDLQWLGSGAQGAVFSG-KLRSEIVAVKKVR---------EQKETDIRHLRKLNHPN--I 311
S L+ +GSG VF + +I A+K V + +I +L KL + I
Sbjct: 59 SILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKI 118
Query: 312 VKFKGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLHSKQII 371
++ +VME C L + LK + + P ++ + + ++ +H I+
Sbjct: 119 IRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIV 177
Query: 372 HRDLKSPNVLIGSKEEAKISDFGTCREWNNKST---KMSFAGTVAWMAPEVIRNEQCSDK 428
H DLK N LI K+ DFG + +T K S G V +M PE I++ S +
Sbjct: 178 HSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRE 236
Query: 429 -----------IDIWSYGIVLWELLTCETPYKD-VDSSAIIWGVGSSSLHLPIPSTCPDG 476
D+WS G +L+ + +TP++ ++ + + + + + P
Sbjct: 237 NGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKD 296
Query: 477 FQLLMKMCWSNAPSSRPSFKQILSHLDIASQEVLRIQPEPYYKMQMIWKEEIR 529
Q ++K C P R S ++L+H ++IQ P +M EE++
Sbjct: 297 LQDVLKCCLKRDPKQRISIPELLAH------PYVQIQTHPVNQMAKGTTEEMK 343
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 121/259 (46%), Gaps = 41/259 (15%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVKKVREQKETDIRHLRKLNHPN-------IVKFKGVCT 319
LGSG G+V+SG S+ VA+K V + + +D L PN +V K V +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL-----PNGTRVPMEVVLLKKVSS 85
Query: 320 QAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNW-----------AR----QIAAGMNY 364
++++ + L+ + E P Q L+++ AR Q+ + +
Sbjct: 86 GFSGVIRLLDWFERPDSFVLILERPE-PVQDLFDFITERGALQEELARSFFWQVLEAVRH 144
Query: 365 LHSKQIIHRDLKSPNVLIG-SKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNE 423
H+ ++HRD+K N+LI ++ E K+ DFG+ + + F GT + PE IR
Sbjct: 145 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYH 203
Query: 424 QCSDK-IDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMK 482
+ + +WS GI+L++++ + P++ D I G + C Q L++
Sbjct: 204 RYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEII---RGQVFFRQRVSXEC----QHLIR 255
Query: 483 MCWSNAPSSRPSFKQILSH 501
C + PS RP+F++I +H
Sbjct: 256 WCLALRPSDRPTFEEIQNH 274
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 121/259 (46%), Gaps = 41/259 (15%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVKKVREQKETDIRHLRKLNHPN-------IVKFKGVCT 319
LGSG G+V+SG S+ VA+K V + + +D L PN +V K V +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL-----PNGTRVPMEVVLLKKVSS 98
Query: 320 QAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNW-----------AR----QIAAGMNY 364
++++ + L+ + E P Q L+++ AR Q+ + +
Sbjct: 99 GFSGVIRLLDWFERPDSFVLILERPE-PVQDLFDFITERGALQEELARSFFWQVLEAVRH 157
Query: 365 LHSKQIIHRDLKSPNVLIG-SKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNE 423
H+ ++HRD+K N+LI ++ E K+ DFG+ + + F GT + PE IR
Sbjct: 158 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYH 216
Query: 424 QCSDK-IDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMK 482
+ + +WS GI+L++++ + P++ D I G + C Q L++
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEII---GGQVFFRQRVSXEC----QHLIR 268
Query: 483 MCWSNAPSSRPSFKQILSH 501
C + PS RP+F++I +H
Sbjct: 269 WCLALRPSDRPTFEEIQNH 287
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 121/259 (46%), Gaps = 41/259 (15%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVKKVREQKETDIRHLRKLNHPN-------IVKFKGVCT 319
LGSG G+V+SG S+ VA+K V + + +D L PN +V K V +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL-----PNGTRVPMEVVLLKKVSS 86
Query: 320 QAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNW-----------AR----QIAAGMNY 364
++++ + L+ + E P Q L+++ AR Q+ + +
Sbjct: 87 GFSGVIRLLDWFERPDSFVLILERPE-PVQDLFDFITERGALQEELARSFFWQVLEAVRH 145
Query: 365 LHSKQIIHRDLKSPNVLIG-SKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNE 423
H+ ++HRD+K N+LI ++ E K+ DFG+ + + F GT + PE IR
Sbjct: 146 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYH 204
Query: 424 QCSDK-IDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMK 482
+ + +WS GI+L++++ + P++ D I G + C Q L++
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEII---RGQVFFRQRVSXEC----QHLIR 256
Query: 483 MCWSNAPSSRPSFKQILSH 501
C + PS RP+F++I +H
Sbjct: 257 WCLALRPSDRPTFEEIQNH 275
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 121/259 (46%), Gaps = 41/259 (15%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVKKVREQKETDIRHLRKLNHPN-------IVKFKGVCT 319
LGSG G+V+SG S+ VA+K V + + +D L PN +V K V +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL-----PNGTRVPMEVVLLKKVSS 99
Query: 320 QAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNW-----------AR----QIAAGMNY 364
++++ + L+ + E P Q L+++ AR Q+ + +
Sbjct: 100 GFSGVIRLLDWFERPDSFVLILERPE-PVQDLFDFITERGALQEELARSFFWQVLEAVRH 158
Query: 365 LHSKQIIHRDLKSPNVLIG-SKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNE 423
H+ ++HRD+K N+LI ++ E K+ DFG+ + + F GT + PE IR
Sbjct: 159 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYH 217
Query: 424 QCSDK-IDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMK 482
+ + +WS GI+L++++ + P++ D I G + C Q L++
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEII---GGQVFFRQRVSXEC----QHLIR 269
Query: 483 MCWSNAPSSRPSFKQILSH 501
C + PS RP+F++I +H
Sbjct: 270 WCLALRPSDRPTFEEIQNH 288
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 121/259 (46%), Gaps = 41/259 (15%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVKKVREQKETDIRHLRKLNHPN-------IVKFKGVCT 319
LGSG G+V+SG S+ VA+K V + + +D L PN +V K V +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL-----PNGTRVPMEVVLLKKVSS 99
Query: 320 QAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNW-----------AR----QIAAGMNY 364
++++ + L+ + E P Q L+++ AR Q+ + +
Sbjct: 100 GFSGVIRLLDWFERPDSFVLILERPE-PVQDLFDFITERGALQEELARSFFWQVLEAVRH 158
Query: 365 LHSKQIIHRDLKSPNVLIG-SKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNE 423
H+ ++HRD+K N+LI ++ E K+ DFG+ + + F GT + PE IR
Sbjct: 159 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYH 217
Query: 424 QCSDK-IDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMK 482
+ + +WS GI+L++++ + P++ D I G + C Q L++
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEII---GGQVFFRQRVSXEC----QHLIR 269
Query: 483 MCWSNAPSSRPSFKQILSH 501
C + PS RP+F++I +H
Sbjct: 270 WCLALRPSDRPTFEEIQNH 288
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 121/259 (46%), Gaps = 41/259 (15%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVKKVREQKETDIRHLRKLNHPN-------IVKFKGVCT 319
LGSG G+V+SG S+ VA+K V + + +D L PN +V K V +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL-----PNGTRVPMEVVLLKKVSS 113
Query: 320 QAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNW-----------AR----QIAAGMNY 364
++++ + L+ + E P Q L+++ AR Q+ + +
Sbjct: 114 GFSGVIRLLDWFERPDSFVLILERPE-PVQDLFDFITERGALQEELARSFFWQVLEAVRH 172
Query: 365 LHSKQIIHRDLKSPNVLIG-SKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNE 423
H+ ++HRD+K N+LI ++ E K+ DFG+ + + F GT + PE IR
Sbjct: 173 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYH 231
Query: 424 QCSDK-IDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMK 482
+ + +WS GI+L++++ + P++ D I G + C Q L++
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEII---RGQVFFRQRVSXEC----QHLIR 283
Query: 483 MCWSNAPSSRPSFKQILSH 501
C + PS RP+F++I +H
Sbjct: 284 WCLALRPSDRPTFEEIQNH 302
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 101/226 (44%), Gaps = 33/226 (14%)
Query: 258 IPFESISDLQWLGSGAQGAVFSGKLRSEIVAVK------KVREQKETDIRHLRKLNHPNI 311
+P S+ L+ G G V+ +L ++ VAVK K Q E +I + H N+
Sbjct: 12 VPRGSLQLLEIKARGRFGCVWKAQLMNDFVAVKIFPLQDKQSWQSEREIFSTPGMKHENL 71
Query: 312 VKF-----KGVCTQAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNWARQIAAGMNYLH 366
++F +G + + ++ + G L + LK G + L + A ++ G++YLH
Sbjct: 72 LQFIAAEKRGSNLEVELW-LITAFHDKGSLTDYLK-GNIITWNELCHVAETMSRGLSYLH 129
Query: 367 SK-----------QIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNK---STKMSFAGTV 412
I HRD KS NVL+ S A ++DFG + GT
Sbjct: 130 EDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTR 189
Query: 413 AWMAPEVIRN-----EQCSDKIDIWSYGIVLWELLT-CETPYKDVD 452
+MAPEV+ +ID+++ G+VLWEL++ C+ VD
Sbjct: 190 RYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVD 235
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 121/259 (46%), Gaps = 41/259 (15%)
Query: 269 LGSGAQGAVFSGKLRSE--IVAVKKVREQKETDIRHLRKLNHPN-------IVKFKGVCT 319
LGSG G+V+SG S+ VA+K V + + +D L PN +V K V +
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL-----PNGTRVPMEVVLLKKVSS 118
Query: 320 QAPCYCIVMEYCAYGPLYNLLKDGEEVPPQRLYNW-----------AR----QIAAGMNY 364
++++ + L+ + E P Q L+++ AR Q+ + +
Sbjct: 119 GFSGVIRLLDWFERPDSFVLILERPE-PVQDLFDFITERGALQEELARSFFWQVLEAVRH 177
Query: 365 LHSKQIIHRDLKSPNVLIG-SKEEAKISDFGTCREWNNKSTKMSFAGTVAWMAPEVIRNE 423
H+ ++HRD+K N+LI ++ E K+ DFG+ + + F GT + PE IR
Sbjct: 178 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYH 236
Query: 424 QCSDK-IDIWSYGIVLWELLTCETPYKDVDSSAIIWGVGSSSLHLPIPSTCPDGFQLLMK 482
+ + +WS GI+L++++ + P++ D I G + C Q L++
Sbjct: 237 RYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEII---RGQVFFRQRVSXEC----QHLIR 288
Query: 483 MCWSNAPSSRPSFKQILSH 501
C + PS RP+F++I +H
Sbjct: 289 WCLALRPSDRPTFEEIQNH 307
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 22/177 (12%)
Query: 346 VPPQRLYNWARQIAAGMNYLHS-KQIIHRDLKSPNVLIGSKEEAKISDFGTCREWNNKST 404
+P Q + + + +Y+H+ K I HRD+K N+L+ K+SDFG +K
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKI 207
Query: 405 KMSFAGTVAWMAPEVIRNEQCSD--KIDIWSYGIVLWELLTCETP----------YKDVD 452
K S GT +M PE NE + K+DIWS GI L+ + P + ++
Sbjct: 208 KGS-RGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIR 266
Query: 453 SSAIIWGVGSSSLHLPIP---STCPDGFQL-----LMKMCWSNAPSSRPSFKQILSH 501
+ I + + + P+ STC + F +K+ P+ R + + L H
Sbjct: 267 TKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 104/235 (44%), Gaps = 32/235 (13%)
Query: 295 QKETDIRHLRKLNHPNIVKFKGVCTQAPC----YCIVMEYCAYGPLYN---LLKD-GEEV 346
Q+E D+ R NHPNI++ C + +++ + G L+N LKD G +
Sbjct: 74 QREADMH--RLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFL 131
Query: 347 PPQRLYNWARQIAAGMNYLHSKQIIHRDLKSPNVLIGSKEEAKISDFGT----CREWNNK 402
++ I G+ +H+K HRDLK N+L+G + + + D G+ C
Sbjct: 132 TEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGS 191
Query: 403 STKMSFAG------TVAWMAPEVIR-NEQC--SDKIDIWSYGIVLWELLTCETPYKDV-- 451
++ T+++ APE+ C ++ D+WS G VL+ ++ E PY V
Sbjct: 192 RQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQ 251
Query: 452 --DSSAIIWGVGSSSLHLP-IPSTCPDGFQLLMKMCWSNAPSSRPSFKQILSHLD 503
DS A+ + L +P P +QLL M + P RP +LS L+
Sbjct: 252 KGDSVAL---AVQNQLSIPQSPRHSSALWQLLNSMMTVD-PHQRPHIPLLLSQLE 302
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.133 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,907,615
Number of Sequences: 62578
Number of extensions: 820239
Number of successful extensions: 6199
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 84
Number of HSP's that attempted gapping in prelim test: 1965
Number of HSP's gapped (non-prelim): 1927
length of query: 600
length of database: 14,973,337
effective HSP length: 104
effective length of query: 496
effective length of database: 8,465,225
effective search space: 4198751600
effective search space used: 4198751600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)