Your job contains 1 sequence.
>psy16431
MEKINKMEWWSKLVTTDPEINTKKINPEPSKLSDLDGETRGLVEKMMYDQRQKEMGLPTS
DEQKKQDVLKKFMEQHPEMDFSNCKFG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy16431
(87 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q5ZIN1 - symbol:NUDC "Nuclear migration protein... 407 5.5e-38 1
UNIPROTKB|F1NE97 - symbol:NUDC "Nuclear migration protein... 406 7.0e-38 1
MGI|MGI:106014 - symbol:Nudc "nuclear distribution gene C... 397 6.3e-37 1
RGD|3215 - symbol:Nudc "nuclear distribution C homolog (A... 397 6.3e-37 1
UNIPROTKB|Q9Y266 - symbol:NUDC "Nuclear migration protein... 396 8.0e-37 1
ZFIN|ZDB-GENE-040426-899 - symbol:nudc "nuclear distribut... 396 8.0e-37 1
UNIPROTKB|Q17QG2 - symbol:NUDC "Nuclear migration protein... 393 1.7e-36 1
FB|FBgn0021768 - symbol:nudC "nudC" species:7227 "Drosoph... 389 4.4e-36 1
UNIPROTKB|F1STR6 - symbol:NUDC "Uncharacterized protein" ... 385 1.2e-35 1
WB|WBGene00003829 - symbol:nud-1 species:6239 "Caenorhabd... 362 3.2e-33 1
UNIPROTKB|G4N7C2 - symbol:MGG_03604 "Nuclear movement pro... 339 8.8e-31 1
TAIR|locus:2178431 - symbol:BOB1 "BOBBER1" species:3702 "... 312 6.4e-28 1
TAIR|locus:2137345 - symbol:AT4G27890 "AT4G27890" species... 294 5.2e-26 1
GENEDB_PFALCIPARUM|PF13_0204 - symbol:PF13_0204 "nuclear ... 287 2.9e-25 1
UNIPROTKB|Q8IDW4 - symbol:PF13_0204 "Nuclear movement pro... 287 2.9e-25 1
DICTYBASE|DDB_G0286159 - symbol:nudc "nuclear distributio... 253 1.1e-21 1
POMBASE|SPBC19F8.02 - symbol:SPBC19F8.02 "nuclear distrib... 246 6.3e-21 1
ZFIN|ZDB-GENE-040426-2255 - symbol:nudcd3 "NudC domain co... 117 1.6e-06 1
MGI|MGI:2144158 - symbol:Nudcd3 "NudC domain containing 3... 111 8.1e-06 1
>UNIPROTKB|Q5ZIN1 [details] [associations]
symbol:NUDC "Nuclear migration protein nudC" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] GO:GO:0005737
GO:GO:0051301 GO:GO:0007067 InterPro:IPR008978 SUPFAM:SSF49764
GO:GO:0005874 eggNOG:NOG292552 HOGENOM:HOG000182245
InterPro:IPR007052 InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203
InterPro:IPR025934 Pfam:PF14050 CTD:10726 HOVERGEN:HBG052690
OrthoDB:EOG4640CG EMBL:AJ720753 IPI:IPI00603049
RefSeq:NP_001006311.1 UniGene:Gga.2521 ProteinModelPortal:Q5ZIN1
SMR:Q5ZIN1 STRING:Q5ZIN1 PRIDE:Q5ZIN1 GeneID:419578 KEGG:gga:419578
InParanoid:Q5ZIN1 NextBio:20822610 Uniprot:Q5ZIN1
Length = 341
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 75/86 (87%), Positives = 80/86 (93%)
Query: 1 MEKINKMEWWSKLVTTDPEINTKKINPEPSKLSDLDGETRGLVEKMMYDQRQKEMGLPTS 60
+EKINKMEWW+KLV+TDPEINTKKINPE SKLSDLD ETR +VEKMMYDQRQK MGLPTS
Sbjct: 255 LEKINKMEWWNKLVSTDPEINTKKINPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTS 314
Query: 61 DEQKKQDVLKKFMEQHPEMDFSNCKF 86
DEQKKQD+LKKFMEQHPEMDFS KF
Sbjct: 315 DEQKKQDILKKFMEQHPEMDFSKAKF 340
>UNIPROTKB|F1NE97 [details] [associations]
symbol:NUDC "Nuclear migration protein nudC" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] GO:GO:0005737
InterPro:IPR008978 SUPFAM:SSF49764 InterPro:IPR007052
InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203
GeneTree:ENSGT00530000063486 InterPro:IPR025934 Pfam:PF14050
OMA:NHHNQLA IPI:IPI00603049 EMBL:AADN02051291 PRIDE:F1NE97
Ensembl:ENSGALT00000001317 Uniprot:F1NE97
Length = 341
Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
Identities = 74/86 (86%), Positives = 80/86 (93%)
Query: 1 MEKINKMEWWSKLVTTDPEINTKKINPEPSKLSDLDGETRGLVEKMMYDQRQKEMGLPTS 60
+EK+NKMEWW+KLV+TDPEINTKKINPE SKLSDLD ETR +VEKMMYDQRQK MGLPTS
Sbjct: 255 LEKVNKMEWWNKLVSTDPEINTKKINPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTS 314
Query: 61 DEQKKQDVLKKFMEQHPEMDFSNCKF 86
DEQKKQD+LKKFMEQHPEMDFS KF
Sbjct: 315 DEQKKQDILKKFMEQHPEMDFSKAKF 340
>MGI|MGI:106014 [details] [associations]
symbol:Nudc "nuclear distribution gene C homolog
(Aspergillus)" species:10090 "Mus musculus" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
MGI:MGI:106014 GO:GO:0005634 GO:GO:0005794 GO:GO:0051301
GO:GO:0007067 GO:GO:0043434 InterPro:IPR008978 SUPFAM:SSF49764
GO:GO:0005874 GO:GO:0007097 eggNOG:NOG292552 HOGENOM:HOG000182245
InterPro:IPR007052 InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203
GeneTree:ENSGT00530000063486 InterPro:IPR025934 Pfam:PF14050
CTD:10726 HOVERGEN:HBG052690 OMA:NHHNQLA OrthoDB:EOG4640CG
EMBL:X81443 EMBL:Y15522 EMBL:AK032673 EMBL:AK146323 EMBL:BC011253
IPI:IPI00132942 RefSeq:NP_035078.1 UniGene:Mm.69 PDB:1WFI PDB:2CR0
PDBsum:1WFI PDBsum:2CR0 ProteinModelPortal:O35685 SMR:O35685
IntAct:O35685 MINT:MINT-4104807 STRING:O35685 PhosphoSite:O35685
REPRODUCTION-2DPAGE:O35685 PaxDb:O35685 PRIDE:O35685
Ensembl:ENSMUST00000030665 GeneID:18221 KEGG:mmu:18221
InParanoid:O35685 EvolutionaryTrace:O35685 NextBio:293640
Bgee:O35685 CleanEx:MM_NUDC Genevestigator:O35685
GermOnline:ENSMUSG00000028851 Uniprot:O35685
Length = 332
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 72/86 (83%), Positives = 80/86 (93%)
Query: 1 MEKINKMEWWSKLVTTDPEINTKKINPEPSKLSDLDGETRGLVEKMMYDQRQKEMGLPTS 60
+EKINKMEWW++LVT+DPEINTKKINPE SKLSDLD ETR +VEKMMYDQRQK MGLPTS
Sbjct: 246 LEKINKMEWWNRLVTSDPEINTKKINPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTS 305
Query: 61 DEQKKQDVLKKFMEQHPEMDFSNCKF 86
DEQKKQ++LKKFM+QHPEMDFS KF
Sbjct: 306 DEQKKQEILKKFMDQHPEMDFSKAKF 331
>RGD|3215 [details] [associations]
symbol:Nudc "nuclear distribution C homolog (A. nidulans)"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0043434 "response to peptide hormone stimulus" evidence=IEP]
[GO:0051301 "cell division" evidence=IEA] RGD:3215 GO:GO:0005634
GO:GO:0005794 GO:GO:0051301 GO:GO:0007067 GO:GO:0043434
InterPro:IPR008978 SUPFAM:SSF49764 GO:GO:0005874 GO:GO:0007097
eggNOG:NOG292552 HOGENOM:HOG000182245 InterPro:IPR007052
InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203
GeneTree:ENSGT00530000063486 InterPro:IPR025934 Pfam:PF14050
CTD:10726 HOVERGEN:HBG052690 OMA:NHHNQLA OrthoDB:EOG4640CG
EMBL:X82445 EMBL:BC065581 IPI:IPI00210009 PIR:A55897
RefSeq:NP_058967.1 UniGene:Rn.10413 ProteinModelPortal:Q63525
SMR:Q63525 STRING:Q63525 PhosphoSite:Q63525 PRIDE:Q63525
Ensembl:ENSRNOT00000009933 GeneID:29648 KEGG:rno:29648 UCSC:RGD:3215
InParanoid:Q63525 NextBio:609926 Genevestigator:Q63525
GermOnline:ENSRNOG00000007399 Uniprot:Q63525
Length = 332
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 72/86 (83%), Positives = 80/86 (93%)
Query: 1 MEKINKMEWWSKLVTTDPEINTKKINPEPSKLSDLDGETRGLVEKMMYDQRQKEMGLPTS 60
+EKINKMEWW++LVT+DPEINTKKINPE SKLSDLD ETR +VEKMMYDQRQK MGLPTS
Sbjct: 246 LEKINKMEWWNRLVTSDPEINTKKINPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTS 305
Query: 61 DEQKKQDVLKKFMEQHPEMDFSNCKF 86
DEQKKQ++LKKFM+QHPEMDFS KF
Sbjct: 306 DEQKKQEILKKFMDQHPEMDFSKAKF 331
>UNIPROTKB|Q9Y266 [details] [associations]
symbol:NUDC "Nuclear migration protein nudC" species:9606
"Homo sapiens" [GO:0005874 "microtubule" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=TAS] [GO:0008283
"cell proliferation" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0000910
"cytokinesis" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] GO:GO:0007275 GO:GO:0005829
GO:GO:0005794 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0005654 Reactome:REACT_21300
GO:GO:0008283 GO:GO:0043434 GO:GO:0000910 InterPro:IPR008978
SUPFAM:SSF49764 GO:GO:0005874 GO:GO:0007097 GO:GO:0000236
eggNOG:NOG292552 HOGENOM:HOG000182245 InterPro:IPR007052
InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203 EMBL:AL356390
InterPro:IPR025934 Pfam:PF14050 CTD:10726 HOVERGEN:HBG052690
OMA:NHHNQLA EMBL:AF130736 EMBL:AF125465 EMBL:AF100760 EMBL:AB019408
EMBL:AF086922 EMBL:AL136725 EMBL:BC002399 EMBL:BC003132
EMBL:BC006147 EMBL:BC007280 EMBL:BC015153 EMBL:BC021139
IPI:IPI00550746 RefSeq:NP_006591.1 UniGene:Hs.263812 PDB:3QOR
PDBsum:3QOR ProteinModelPortal:Q9Y266 SMR:Q9Y266 IntAct:Q9Y266
MINT:MINT-1132616 STRING:Q9Y266 PhosphoSite:Q9Y266 DMDM:62287138
PaxDb:Q9Y266 PeptideAtlas:Q9Y266 PRIDE:Q9Y266 DNASU:10726
Ensembl:ENST00000321265 Ensembl:ENST00000435827
Ensembl:ENST00000452707 GeneID:10726 KEGG:hsa:10726 UCSC:uc001bng.1
GeneCards:GC01P027226 HGNC:HGNC:8045 HPA:HPA027183 HPA:HPA028105
MIM:610325 neXtProt:NX_Q9Y266 PharmGKB:PA31827 InParanoid:Q9Y266
PhylomeDB:Q9Y266 GenomeRNAi:10726 NextBio:40723 Bgee:Q9Y266
CleanEx:HS_NUDC Genevestigator:Q9Y266 GermOnline:ENSG00000090273
Uniprot:Q9Y266
Length = 331
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 72/86 (83%), Positives = 80/86 (93%)
Query: 1 MEKINKMEWWSKLVTTDPEINTKKINPEPSKLSDLDGETRGLVEKMMYDQRQKEMGLPTS 60
+EKINKMEWWS+LV++DPEINTKKINPE SKLSDLD ETR +VEKMMYDQRQK MGLPTS
Sbjct: 245 LEKINKMEWWSRLVSSDPEINTKKINPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTS 304
Query: 61 DEQKKQDVLKKFMEQHPEMDFSNCKF 86
DEQKKQ++LKKFM+QHPEMDFS KF
Sbjct: 305 DEQKKQEILKKFMDQHPEMDFSKAKF 330
>ZFIN|ZDB-GENE-040426-899 [details] [associations]
symbol:nudc "nuclear distribution gene C homolog"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
ZFIN:ZDB-GENE-040426-899 InterPro:IPR008978 SUPFAM:SSF49764
InterPro:IPR007052 InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203
InterPro:IPR025934 Pfam:PF14050 CTD:10726 HOVERGEN:HBG052690
EMBL:BC045909 IPI:IPI00513554 RefSeq:NP_957213.1 UniGene:Dr.19967
ProteinModelPortal:Q7ZVD2 SMR:Q7ZVD2 STRING:Q7ZVD2 GeneID:393893
KEGG:dre:393893 NextBio:20814873 ArrayExpress:Q7ZVD2 Bgee:Q7ZVD2
Uniprot:Q7ZVD2
Length = 333
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 74/85 (87%), Positives = 78/85 (91%)
Query: 2 EKINKMEWWSKLVTTDPEINTKKINPEPSKLSDLDGETRGLVEKMMYDQRQKEMGLPTSD 61
EKINKMEWW+KLVTTDPEINTKKI PE SKLSDLDGETR +VEKMMYDQRQK MGLPTS+
Sbjct: 248 EKINKMEWWNKLVTTDPEINTKKICPENSKLSDLDGETRSMVEKMMYDQRQKSMGLPTSE 307
Query: 62 EQKKQDVLKKFMEQHPEMDFSNCKF 86
EQKKQD+LKKFM QHPEMDFS KF
Sbjct: 308 EQKKQDILKKFMAQHPEMDFSKAKF 332
>UNIPROTKB|Q17QG2 [details] [associations]
symbol:NUDC "Nuclear migration protein nudC" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] GO:GO:0005634 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 InterPro:IPR008978 SUPFAM:SSF49764 GO:GO:0005874
eggNOG:NOG292552 HOGENOM:HOG000182245 InterPro:IPR007052
InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203
GeneTree:ENSGT00530000063486 InterPro:IPR025934 Pfam:PF14050
EMBL:BC118381 IPI:IPI00712148 RefSeq:NP_001069075.1 UniGene:Bt.5486
ProteinModelPortal:Q17QG2 SMR:Q17QG2 STRING:Q17QG2 PRIDE:Q17QG2
Ensembl:ENSBTAT00000005789 GeneID:513277 KEGG:bta:513277 CTD:10726
HOVERGEN:HBG052690 InParanoid:Q17QG2 OMA:NHHNQLA OrthoDB:EOG4640CG
NextBio:20870793 Uniprot:Q17QG2
Length = 332
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 71/86 (82%), Positives = 80/86 (93%)
Query: 1 MEKINKMEWWSKLVTTDPEINTKKINPEPSKLSDLDGETRGLVEKMMYDQRQKEMGLPTS 60
+EKINKMEWWS+LV++DPEINTKKINPE SKLSDLD ETR +VEKMMYDQRQK MGLPTS
Sbjct: 246 LEKINKMEWWSRLVSSDPEINTKKINPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTS 305
Query: 61 DEQKKQDVLKKFMEQHPEMDFSNCKF 86
DEQKKQ++LKKFM+QHPEMDFS +F
Sbjct: 306 DEQKKQEILKKFMDQHPEMDFSKARF 331
>FB|FBgn0021768 [details] [associations]
symbol:nudC "nudC" species:7227 "Drosophila melanogaster"
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007097 "nuclear
migration" evidence=ISS;NAS] [GO:0048477 "oogenesis" evidence=NAS]
[GO:0005875 "microtubule associated complex" evidence=IDA]
GO:GO:0005737 GO:GO:0005875 EMBL:AE014296 InterPro:IPR008978
SUPFAM:SSF49764 GO:GO:0007097 eggNOG:NOG292552 InterPro:IPR007052
InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203
GeneTree:ENSGT00530000063486 InterPro:IPR025934 Pfam:PF14050
CTD:10726 OMA:NHHNQLA EMBL:AY071485 EMBL:AY328470
RefSeq:NP_001246805.1 RefSeq:NP_648923.1 UniGene:Dm.5904 SMR:Q9VVA6
STRING:Q9VVA6 EnsemblMetazoa:FBtr0075328 EnsemblMetazoa:FBtr0305912
GeneID:39879 KEGG:dme:Dmel_CG9710 UCSC:CG9710-RA
FlyBase:FBgn0021768 InParanoid:Q9VVA6 OrthoDB:EOG45QFW8
GenomeRNAi:39879 NextBio:815862 Uniprot:Q9VVA6
Length = 332
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 68/86 (79%), Positives = 81/86 (94%)
Query: 1 MEKINKMEWWSKLVTTDPEINTKKINPEPSKLSDLDGETRGLVEKMMYDQRQKEMGLPTS 60
++KINKM WWS+LVTTDPEI+T+KINPE SKLSDLDGETR +VEKMMYDQRQKE+GLPTS
Sbjct: 246 LDKINKMNWWSRLVTTDPEISTRKINPESSKLSDLDGETRSMVEKMMYDQRQKELGLPTS 305
Query: 61 DEQKKQDVLKKFMEQHPEMDFSNCKF 86
+++KKQD+L+KF +QHPEMDFS CKF
Sbjct: 306 EDRKKQDILEKFKQQHPEMDFSKCKF 331
>UNIPROTKB|F1STR6 [details] [associations]
symbol:NUDC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] GO:GO:0005737
InterPro:IPR008978 SUPFAM:SSF49764 InterPro:IPR007052
InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203
GeneTree:ENSGT00530000063486 InterPro:IPR025934 Pfam:PF14050
OMA:NHHNQLA EMBL:FP015947 Ensembl:ENSSSCT00000003960 Uniprot:F1STR6
Length = 331
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 72/86 (83%), Positives = 79/86 (91%)
Query: 1 MEKINKMEWWSKLVTTDPEINTKKINPEPSKLSDLDGETRGLVEKMMYDQRQKEMGLPTS 60
+EKINKMEWWS+LV++DPEINTKKINPE SKLSDLD ETR +VEKMMYDQRQK MGLPTS
Sbjct: 246 LEKINKMEWWSRLVSSDPEINTKKINPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTS 305
Query: 61 DEQKKQDVLKKFMEQHPEMDFSNCKF 86
DEQKKQ +LKKFM+QHPEMDFS KF
Sbjct: 306 DEQKKQ-ILKKFMDQHPEMDFSKAKF 330
>WB|WBGene00003829 [details] [associations]
symbol:nud-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0035047 "centrosomal and
pronuclear rotation" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0051932 "synaptic transmission, GABAergic" evidence=IGI;IMP]
[GO:0048489 "synaptic vesicle transport" evidence=IMP] [GO:0042802
"identical protein binding" evidence=IPI] [GO:0042026 "protein
refolding" evidence=IDA] [GO:0051082 "unfolded protein binding"
evidence=IDA] GO:GO:0009792 GO:GO:0002009 GO:GO:0035046
GO:GO:0040010 GO:GO:0006915 GO:GO:0051082 GO:GO:0040011
GO:GO:0000910 GO:GO:0040035 InterPro:IPR008978 SUPFAM:SSF49764
GO:GO:0048489 GO:GO:0040025 GO:GO:0042026 InterPro:IPR007052
InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203 GO:GO:0051932
GO:GO:0035047 EMBL:Z81546 GeneTree:ENSGT00530000063486
InterPro:IPR025934 Pfam:PF14050 OMA:NHHNQLA EMBL:AF164431
PIR:T22528 RefSeq:NP_499749.1 UniGene:Cel.19491
ProteinModelPortal:G5EE74 SMR:G5EE74 EnsemblMetazoa:F53A2.4.1
EnsemblMetazoa:F53A2.4.2 GeneID:176754 KEGG:cel:CELE_F53A2.4
CTD:176754 WormBase:F53A2.4 NextBio:893864 Uniprot:G5EE74
Length = 320
Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 64/87 (73%), Positives = 77/87 (88%)
Query: 1 MEKINKMEWWSKLVTTDPEINTKKINPEPSKLSDLDGETRGLVEKMMYDQRQKEMGLPTS 60
+EKIN MEWW++ + +DP INTK++ PE SKLSDLDGETR +VEKMMYDQRQKEMGLPTS
Sbjct: 234 LEKINDMEWWNRFLDSDPPINTKEVKPENSKLSDLDGETRAMVEKMMYDQRQKEMGLPTS 293
Query: 61 DEQKKQDVLKKFMEQHPEMDFSNCKFG 87
DE+KK D+L++FM+QHPEMDFSN K G
Sbjct: 294 DEKKKHDMLQQFMKQHPEMDFSNAKIG 320
>UNIPROTKB|G4N7C2 [details] [associations]
symbol:MGG_03604 "Nuclear movement protein nudC"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR008978
SUPFAM:SSF49764 EMBL:CM001234 InterPro:IPR007052 InterPro:IPR017447
Pfam:PF04969 PROSITE:PS51203 RefSeq:XP_003716300.1
ProteinModelPortal:G4N7C2 EnsemblFungi:MGG_03604T0 GeneID:2676687
KEGG:mgr:MGG_03604 Uniprot:G4N7C2
Length = 191
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 61/85 (71%), Positives = 73/85 (85%)
Query: 1 MEKINKMEWWSKLVTTDPEINTKKINPEPSKLSDLDGETRGLVEKMMYDQRQKEMGLPTS 60
++K+NKMEWW +VT P+I+ KINPE SKLSDLDGETRG+VEKMMYDQRQKE+G P+S
Sbjct: 105 LDKVNKMEWWPHVVTDAPKIDVTKINPENSKLSDLDGETRGMVEKMMYDQRQKELGKPSS 164
Query: 61 DEQKKQDVLKKFMEQHPEMDFSNCK 85
DEQKK D+L KF ++HPEMDFSN K
Sbjct: 165 DEQKKLDLLAKFQKEHPEMDFSNAK 189
>TAIR|locus:2178431 [details] [associations]
symbol:BOB1 "BOBBER1" species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0006457 "protein
folding" evidence=RCA;IDA] [GO:0009408 "response to heat"
evidence=IEP;RCA;IMP] [GO:0009555 "pollen development"
evidence=IMP] [GO:0009965 "leaf morphogenesis" evidence=IMP]
[GO:0010450 "inflorescence meristem growth" evidence=IMP]
[GO:0032502 "developmental process" evidence=IMP] [GO:0048448
"stamen morphogenesis" evidence=IMP] [GO:0048833 "specification of
floral organ number" evidence=IMP] [GO:0009880 "embryonic pattern
specification" evidence=IMP] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009644 "response to high light intensity" evidence=RCA]
[GO:0034976 "response to endoplasmic reticulum stress"
evidence=RCA] [GO:0042542 "response to hydrogen peroxide"
evidence=RCA] GO:GO:0005829 EMBL:CP002688 GO:GO:0006457
GO:GO:0009555 GO:GO:0009408 EMBL:AB020754 InterPro:IPR008978
SUPFAM:SSF49764 GO:GO:0009965 GO:GO:0009880 EMBL:BT003074
EMBL:AK227305 EMBL:AY087741 IPI:IPI00519101 RefSeq:NP_200152.1
UniGene:At.27931 ProteinModelPortal:Q9LV09 SMR:Q9LV09 IntAct:Q9LV09
STRING:Q9LV09 PaxDb:Q8LAL5 PRIDE:Q9LV09 EnsemblPlants:AT5G53400.1
GeneID:835421 KEGG:ath:AT5G53400 TAIR:At5g53400 eggNOG:NOG292552
HOGENOM:HOG000182245 InParanoid:Q9LV09 OMA:CYWNIED PhylomeDB:Q9LV09
ProtClustDB:CLSN2915895 Genevestigator:Q9LV09 GO:GO:0010450
GO:GO:0048833 GO:GO:0048448 InterPro:IPR007052 InterPro:IPR017447
Pfam:PF04969 PROSITE:PS51203 Uniprot:Q9LV09
Length = 304
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 56/86 (65%), Positives = 70/86 (81%)
Query: 1 MEKINKMEWWSKLVTTDPEINTKKINPEPSKLSDLDGETRGLVEKMMYDQRQKEMGLPTS 60
+ K ++MEWW V +PEI+T+K+ PE SKL DLD ETR VEKMM+DQRQK+MGLPTS
Sbjct: 218 LTKSDQMEWWKCCVKGEPEIDTQKVEPETSKLGDLDPETRSTVEKMMFDQRQKQMGLPTS 277
Query: 61 DEQKKQDVLKKFMEQHPEMDFSNCKF 86
+E +KQ++LKKFM +HPEMDFSN KF
Sbjct: 278 EELQKQEILKKFMSEHPEMDFSNAKF 303
>TAIR|locus:2137345 [details] [associations]
symbol:AT4G27890 "AT4G27890" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL078579
EMBL:AL161571 InterPro:IPR008978 SUPFAM:SSF49764 eggNOG:NOG292552
HOGENOM:HOG000182245 ProtClustDB:CLSN2915895 InterPro:IPR007052
InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203 EMBL:AY142524
IPI:IPI00547347 PIR:T09028 RefSeq:NP_194518.1 UniGene:At.32064
ProteinModelPortal:Q9STN7 SMR:Q9STN7 EnsemblPlants:AT4G27890.1
GeneID:828902 KEGG:ath:AT4G27890 TAIR:At4g27890 InParanoid:Q9STN7
OMA:AIISEME PhylomeDB:Q9STN7 Genevestigator:Q9STN7 Uniprot:Q9STN7
Length = 293
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 55/86 (63%), Positives = 68/86 (79%)
Query: 1 MEKINKMEWWSKLVTTDPEINTKKINPEPSKLSDLDGETRGLVEKMMYDQRQKEMGLPTS 60
+ K ++MEWW V +PEI+T+K+ PE SKL DLD ETR VEKMM+DQRQK+MGLP S
Sbjct: 207 LTKQDQMEWWKYCVKGEPEIDTQKVEPETSKLGDLDPETRASVEKMMFDQRQKQMGLPRS 266
Query: 61 DEQKKQDVLKKFMEQHPEMDFSNCKF 86
DE +K+D+LKKFM Q+P MDFSN KF
Sbjct: 267 DEIEKKDMLKKFMAQNPGMDFSNAKF 292
>GENEDB_PFALCIPARUM|PF13_0204 [details] [associations]
symbol:PF13_0204 "nuclear movement protein,
putative" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR008978 SUPFAM:SSF49764 HOGENOM:HOG000182245
InterPro:IPR007052 InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203
EMBL:AL844509 InterPro:IPR025934 Pfam:PF14050 RefSeq:XP_001350096.1
ProteinModelPortal:Q8IDW4 PRIDE:Q8IDW4
EnsemblProtists:PF13_0204:mRNA GeneID:814173 KEGG:pfa:PF13_0204
EuPathDB:PlasmoDB:PF3D7_1336800 ProtClustDB:CLSZ2514982
Uniprot:Q8IDW4
Length = 386
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 52/89 (58%), Positives = 68/89 (76%)
Query: 1 MEKINKMEWWSKLVTTDPEINTKKINPEPSKLSDLDGETRGLVEKMMYDQRQKEMGLPTS 60
+EK+N MEWW+ ++ D EI+ KKI PE S++ DLD ETR +VEKM+YDQ+QK M LPTS
Sbjct: 286 IEKLNGMEWWNTVIKGDAEIDVKKIVPENSRMEDLDAETRSVVEKMIYDQKQKAMNLPTS 345
Query: 61 DEQKKQDVLKKFMEQHPEMDFS--NCKFG 87
DEQKK ++ +KF + HPEMDFS N +G
Sbjct: 346 DEQKKYEIFEKFKQMHPEMDFSKANINYG 374
>UNIPROTKB|Q8IDW4 [details] [associations]
symbol:PF13_0204 "Nuclear movement protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR008978 SUPFAM:SSF49764 HOGENOM:HOG000182245
InterPro:IPR007052 InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203
EMBL:AL844509 InterPro:IPR025934 Pfam:PF14050 RefSeq:XP_001350096.1
ProteinModelPortal:Q8IDW4 PRIDE:Q8IDW4
EnsemblProtists:PF13_0204:mRNA GeneID:814173 KEGG:pfa:PF13_0204
EuPathDB:PlasmoDB:PF3D7_1336800 ProtClustDB:CLSZ2514982
Uniprot:Q8IDW4
Length = 386
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 52/89 (58%), Positives = 68/89 (76%)
Query: 1 MEKINKMEWWSKLVTTDPEINTKKINPEPSKLSDLDGETRGLVEKMMYDQRQKEMGLPTS 60
+EK+N MEWW+ ++ D EI+ KKI PE S++ DLD ETR +VEKM+YDQ+QK M LPTS
Sbjct: 286 IEKLNGMEWWNTVIKGDAEIDVKKIVPENSRMEDLDAETRSVVEKMIYDQKQKAMNLPTS 345
Query: 61 DEQKKQDVLKKFMEQHPEMDFS--NCKFG 87
DEQKK ++ +KF + HPEMDFS N +G
Sbjct: 346 DEQKKYEIFEKFKQMHPEMDFSKANINYG 374
>DICTYBASE|DDB_G0286159 [details] [associations]
symbol:nudc "nuclear distribution protein C homolog"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005829 "cytosol" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000741 "karyogamy" evidence=IEA] dictyBase:DDB_G0286159
GO:GO:0005829 GO:GO:0005634 GO:GO:0051301 GO:GO:0007067
GenomeReviews:CM000153_GR InterPro:IPR008978 SUPFAM:SSF49764
EMBL:AAFI02000085 GO:GO:0005874 eggNOG:NOG292552 InterPro:IPR007052
InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203 GO:GO:0000741
RefSeq:XP_637884.1 HSSP:O35685 ProteinModelPortal:Q54M64
STRING:Q54M64 EnsemblProtists:DDB0266415 GeneID:8625481
KEGG:ddi:DDB_G0286159 OMA:MEWWAHV ProtClustDB:CLSZ2728900
Uniprot:Q54M64
Length = 171
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 43/84 (51%), Positives = 61/84 (72%)
Query: 3 KINKMEWWSKLVTTDPEINTKKINPEPSKLSDLDGETRGLVEKMMYDQRQKEMGLPTSDE 62
K+ EWWS ++ + EI+ +I P+ S LSD DGETR +VEKM+Y+Q +K GLPT+DE
Sbjct: 87 KLKGQEWWSCIIQGESEIDVTQIKPQNSSLSDFDGETRAMVEKMLYNQNRKAQGLPTTDE 146
Query: 63 QKKQDVLKKFMEQHPEMDFSNCKF 86
++KQ + + F +HP+MDFSN KF
Sbjct: 147 EEKQRIFETFKNEHPDMDFSNAKF 170
>POMBASE|SPBC19F8.02 [details] [associations]
symbol:SPBC19F8.02 "nuclear distribution protein NUDC
homolog" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0010972 "negative regulation of
G2/M transition of mitotic cell cycle" evidence=IMP]
PomBase:SPBC19F8.02 GO:GO:0005634 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 EMBL:CU329671 GenomeReviews:CU329671_GR
InterPro:IPR008978 SUPFAM:SSF49764 GO:GO:0005874 eggNOG:NOG292552
HOGENOM:HOG000182245 InterPro:IPR007052 InterPro:IPR017447
Pfam:PF04969 PROSITE:PS51203 GO:GO:0010972 HSSP:O35685 OMA:MEWWAHV
PIR:T39825 RefSeq:NP_596344.1 ProteinModelPortal:O60166
EnsemblFungi:SPBC19F8.02.1 GeneID:2540736 KEGG:spo:SPBC19F8.02
OrthoDB:EOG444PVR NextBio:20801858 Uniprot:O60166
Length = 166
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 49/85 (57%), Positives = 61/85 (71%)
Query: 1 MEKINKMEWWSKLVTTDPEINTKKINPEPSKLSDLDGETRGLVEKMMYDQRQKEMGLPTS 60
+EK NKMEWWS ++ P I+ I PE SKLSDLD ETR VEKMM +Q QK +
Sbjct: 84 LEKSNKMEWWSCVIKGHPSIDIGSIEPENSKLSDLDEETRATVEKMMLEQSQKR-----T 138
Query: 61 DEQKKQDVLKKFMEQHPEMDFSNCK 85
DEQK++DVL+ FM+QHPE+DFSN +
Sbjct: 139 DEQKRKDVLQNFMKQHPELDFSNVR 163
>ZFIN|ZDB-GENE-040426-2255 [details] [associations]
symbol:nudcd3 "NudC domain containing 3"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND]
ZFIN:ZDB-GENE-040426-2255 InterPro:IPR008978 SUPFAM:SSF49764
InterPro:IPR007052 InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203
CTD:23386 eggNOG:NOG245384 HOVERGEN:HBG100537 InterPro:IPR025934
Pfam:PF14050 EMBL:BC065992 IPI:IPI00481505 RefSeq:NP_998356.1
UniGene:Dr.10429 ProteinModelPortal:Q6NZR9 PRIDE:Q6NZR9
GeneID:406472 KEGG:dre:406472 HOGENOM:HOG000036072
InParanoid:Q6NZR9 OrthoDB:EOG49S673 NextBio:20818062
ArrayExpress:Q6NZR9 Bgee:Q6NZR9 Uniprot:Q6NZR9
Length = 344
Score = 117 (46.2 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 9 WWSKLVTTDPEINTKKINPEPSKLSDLDGETRGLVEKMMYDQRQKEMGLPTSDEQKKQDV 68
WWS ++ + EI+ +IN E S ++ +D E +++++ +D QK G P S E K D+
Sbjct: 255 WWSAVLKGEAEIDVNQINRERS-MATVDEEEHAVLDRLTFDYHQKLQGKPQSHEMKVHDM 313
Query: 69 LKK 71
LKK
Sbjct: 314 LKK 316
>MGI|MGI:2144158 [details] [associations]
symbol:Nudcd3 "NudC domain containing 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] MGI:MGI:2144158 InterPro:IPR008978 SUPFAM:SSF49764
InterPro:IPR007052 InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203
EMBL:AL611926 EMBL:AL607152 EMBL:AK129276 EMBL:AK046219
EMBL:AK049739 EMBL:AK050476 EMBL:AK159391 EMBL:AK159458
EMBL:AK169797 EMBL:AK170329 EMBL:AK171224 EMBL:BC024322
EMBL:BC037090 EMBL:BC057603 IPI:IPI00268927 IPI:IPI00405542
IPI:IPI00457769 IPI:IPI00460739 RefSeq:NP_776109.1 UniGene:Mm.25321
UniGene:Mm.441799 UniGene:Mm.472975 ProteinModelPortal:Q8R1N4
SMR:Q8R1N4 IntAct:Q8R1N4 STRING:Q8R1N4 PhosphoSite:Q8R1N4
PaxDb:Q8R1N4 PRIDE:Q8R1N4 Ensembl:ENSMUST00000066496
Ensembl:ENSMUST00000135631 GeneID:209586 KEGG:mmu:209586
UCSC:uc007hxz.2 UCSC:uc007hya.2 CTD:23386 eggNOG:NOG245384
GeneTree:ENSGT00530000063486 HOVERGEN:HBG100537 InParanoid:Q8R1N4
OMA:PRIQEQF NextBio:372730 Bgee:Q8R1N4 CleanEx:MM_NUDCD3
Genevestigator:Q8R1N4 GermOnline:ENSMUSG00000053838
InterPro:IPR025934 Pfam:PF14050 Uniprot:Q8R1N4
Length = 363
Score = 111 (44.1 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 23/71 (32%), Positives = 42/71 (59%)
Query: 1 MEKINKMEWWSKLVTTDPEINTKKINPEPSKLSDLDGETRGLVEKMMYDQRQKEMGLPTS 60
+ K+ + WWS ++ + I+ KIN E S ++ +D E + +++++ +D QK G P S
Sbjct: 267 LSKVGEY-WWSAILEGEEPIDIDKINKERS-MATVDEEEQAVLDRLTFDYHQKLQGKPQS 324
Query: 61 DEQKKQDVLKK 71
E K ++LKK
Sbjct: 325 HELKVHEMLKK 335
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.129 0.378 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 87 87 0.00091 102 3 11 23 0.40 30
29 0.48 30
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 19
No. of states in DFA: 557 (59 KB)
Total size of DFA: 117 KB (2077 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 12.78u 0.11s 12.89t Elapsed: 00:00:02
Total cpu time: 12.78u 0.11s 12.89t Elapsed: 00:00:02
Start: Thu Aug 15 11:35:26 2013 End: Thu Aug 15 11:35:28 2013