Query psy16432
Match_columns 69
No_of_seqs 106 out of 414
Neff 6.2
Searched_HMMs 29240
Date Fri Aug 16 21:10:18 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16432.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16432hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qor_A Nuclear migration prote 99.8 7.3E-21 2.5E-25 118.4 6.4 64 3-66 32-97 (121)
2 1wfi_A Nuclear distribution ge 99.8 1.3E-19 4.6E-24 113.5 7.0 64 3-66 23-88 (131)
3 1wgv_A KIAA1068 protein; CS do 99.8 9.2E-19 3.1E-23 108.9 6.1 66 3-68 35-104 (124)
4 2rh0_A NUDC domain-containing 99.8 1.7E-18 5.7E-23 112.1 6.8 63 3-66 29-91 (157)
5 2o30_A Nuclear movement protei 99.7 2.7E-18 9.4E-23 107.7 6.6 63 3-67 20-82 (131)
6 2xcm_C SGT1-like protein, cyto 99.5 8.1E-14 2.8E-18 81.4 7.0 64 3-68 18-84 (92)
7 1rl1_A Suppressor of G2 allele 99.5 1.1E-13 3.8E-18 84.0 6.5 64 3-68 25-91 (114)
8 1x5m_A Calcyclin-binding prote 99.2 4.5E-11 1.5E-15 74.2 6.8 57 10-67 45-105 (127)
9 1ejf_A Progesterone receptor P 99.2 5.6E-11 1.9E-15 73.7 6.7 62 3-68 19-86 (125)
10 1wh0_A Ubiquitin carboxyl-term 99.1 1.6E-10 5.5E-15 73.1 6.9 63 3-67 36-113 (134)
11 2cg9_X CO-chaperone protein SB 98.8 1.7E-09 5.9E-14 68.0 3.5 60 3-65 29-97 (134)
12 2kmw_A Uncharacterized protein 98.5 2.4E-07 8.2E-12 59.3 6.3 56 11-68 25-84 (150)
13 4fei_A Heat shock protein-rela 96.8 0.0043 1.5E-07 36.4 5.8 62 4-67 23-97 (102)
14 3gla_A Low molecular weight he 96.7 0.0038 1.3E-07 36.2 5.0 61 4-66 21-99 (100)
15 2y1y_A Alpha-crystallin B chai 96.4 0.0071 2.4E-07 34.8 5.0 61 4-66 13-85 (90)
16 3aab_A Putative uncharacterize 96.3 0.011 3.6E-07 35.7 5.4 61 4-66 41-117 (123)
17 4eld_A MJ16.5-P1, small heat s 96.3 0.024 8.3E-07 35.6 7.3 58 8-66 76-152 (161)
18 2wj5_A Heat shock protein beta 96.1 0.014 4.7E-07 34.3 5.0 61 4-66 18-90 (101)
19 3l1e_A Alpha-crystallin A chai 95.9 0.028 9.5E-07 33.3 6.0 60 5-66 20-91 (106)
20 1gme_A Heat shock protein 16.9 94.9 0.1 3.4E-06 32.6 6.2 61 4-66 60-139 (151)
21 3q9p_A Heat shock protein beta 94.6 0.12 4.2E-06 29.2 5.7 56 8-64 17-84 (85)
22 2klr_A Alpha-crystallin B chai 94.4 0.096 3.3E-06 33.7 5.5 61 4-66 80-152 (175)
23 2bol_A TSP36, small heat shock 90.9 0.78 2.7E-05 32.0 6.5 58 8-66 122-190 (314)
24 2bol_A TSP36, small heat shock 88.5 1.2 4.1E-05 31.1 5.8 60 4-64 240-313 (314)
25 3eud_A Protein SHQ1; CS domain 84.4 4.1 0.00014 24.9 6.0 54 11-67 42-98 (115)
26 2k8q_A Protein SHQ1; beta-sand 83.3 1.7 5.7E-05 27.2 4.0 54 11-67 28-84 (134)
27 1spp_A Major seminal plasma gl 46.0 20 0.0007 20.1 3.0 20 44-63 24-45 (109)
28 3kt9_A Aprataxin; FHA domain, 44.5 46 0.0016 19.4 5.5 50 7-60 38-90 (102)
29 1spp_B Major seminal plasma gl 42.0 25 0.00087 19.9 3.0 20 44-63 27-48 (116)
30 1gjj_A LAP2; inner nuclear mem 42.0 2.2 7.4E-05 27.8 -1.9 28 1-28 23-50 (168)
31 3hun_A Penicillin-binding prot 41.7 15 0.00051 26.9 2.3 41 4-46 364-405 (453)
32 1sfp_A ASFP; spermadhesin, bov 39.3 30 0.001 19.5 3.0 20 44-63 28-49 (114)
33 1vq8_E 50S ribosomal protein L 37.9 39 0.0013 21.7 3.6 45 3-59 6-50 (178)
34 3vwc_A Serine protease inhibit 32.3 92 0.0032 19.6 4.6 48 5-52 36-87 (149)
35 1tvf_A PBP4, penicillin bindin 31.7 21 0.0007 25.1 1.7 36 5-42 329-364 (369)
36 2wno_A Tumor necrosis factor-i 29.1 52 0.0018 19.6 3.0 19 45-63 31-51 (149)
37 2w9x_A AXE2A, CJCE2B, putative 29.0 72 0.0024 21.6 4.0 57 11-68 54-118 (366)
38 1nzi_A Complement C1S componen 27.0 53 0.0018 19.2 2.8 19 45-63 21-41 (159)
39 2cql_A OK/SW-CL.103, 60S ribos 25.0 46 0.0016 19.2 2.1 36 13-54 22-57 (100)
40 3v2d_H 50S ribosomal protein L 25.0 1.4E+02 0.0047 19.0 4.6 39 14-60 15-53 (180)
41 3poj_A Mannan-binding lectin s 24.1 35 0.0012 19.0 1.5 30 33-62 16-48 (115)
42 1szb_A Mannose binding lectin- 23.1 68 0.0023 19.2 2.8 31 33-63 15-48 (170)
43 2wao_A Endoglucanase E; plant 22.5 1.7E+02 0.0059 19.3 6.5 59 10-68 30-98 (341)
44 4a5p_A Protein MXIA, protein V 20.9 53 0.0018 23.4 2.2 35 1-38 89-123 (383)
No 1
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=99.83 E-value=7.3e-21 Score=118.44 Aligned_cols=64 Identities=33% Similarity=0.592 Sum_probs=61.2
Q ss_pred CCCCcc--cccceeEEEeccCceEEEecccceEEeCccccceeeCcceEEEeCCcEEEEEEEEccc
Q psy16432 3 LPTSDE--QKKQDVLKKFMEQHPEMAVRHQTPIIDGELEHEIKLEESTWVFENAKTVMINMEKILS 66 (69)
Q Consensus 3 ipvp~~--~~~kdv~v~i~~~~l~v~vkg~~~~i~G~L~~~V~~des~Wtied~k~l~I~L~K~~~ 66 (69)
||||++ ++++||.|+|++++|+|+++|++++++|+|+++|++|+|+|+++|++.|+|+|+|+++
T Consensus 32 V~lp~~~~~~~kdv~V~i~~~~l~v~~kg~~~~~~g~L~~~I~~deS~w~i~~~~~i~i~L~K~~~ 97 (121)
T 3qor_A 32 VPFCVNFRLKGKDMVVDIQRRHLRVGLKGQPAIIDGELYNEVKVEESSWLIADGAVVTVHLEKINK 97 (121)
T ss_dssp EECCCSSCCCGGGEEEEEETTEEEEEETTSCCSEEEEBSSCBCGGGCEEEEETTTEEEEEEEBSSS
T ss_pred EECCCCCcccccceEEEEEcCEEEEEEcCcceEEeccccccccccccEEEEcCCCEEEEEEEECCC
Confidence 689998 8999999999999999999998889999999999999999999998889999999976
No 2
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=99.80 E-value=1.3e-19 Score=113.52 Aligned_cols=64 Identities=36% Similarity=0.662 Sum_probs=61.0
Q ss_pred CCCCcc--cccceeEEEeccCceEEEecccceEEeCccccceeeCcceEEEeCCcEEEEEEEEccc
Q psy16432 3 LPTSDE--QKKQDVLKKFMEQHPEMAVRHQTPIIDGELEHEIKLEESTWVFENAKTVMINMEKILS 66 (69)
Q Consensus 3 ipvp~~--~~~kdv~v~i~~~~l~v~vkg~~~~i~G~L~~~V~~des~Wtied~k~l~I~L~K~~~ 66 (69)
||||++ ++++|+.|+|++++|+|+++|++++++|+|+++|++|+|+|++++++.|+|+|.|+++
T Consensus 23 I~lp~~~~~~~kdv~V~i~~~~l~v~~kg~~~~~~~~L~~~I~~e~s~w~i~~~k~v~i~L~K~~~ 88 (131)
T 1wfi_A 23 VPFRVSFRLKGKDVVVDIQRRHLRVGLKGQPPVVDGELYNEVKVEESSWLIEDGKVVTVHLEKINK 88 (131)
T ss_dssp ECCCCSSCCCTTSEEEEEETTEEEEEETTSCCSBCSCBSSCBCSTTCEEEEETTTEEEEEEEBSSS
T ss_pred EECCCCCcccccceEEEEeCCEEEEEECCceEEEecccccccccccCEEEEcCCCEEEEEEEECCC
Confidence 689988 9999999999999999999999889999999999999999999998889999999985
No 3
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=99.76 E-value=9.2e-19 Score=108.95 Aligned_cols=66 Identities=24% Similarity=0.462 Sum_probs=60.3
Q ss_pred CCCCccc-ccceeEEEeccCceEEEec---ccceEEeCccccceeeCcceEEEeCCcEEEEEEEEccccC
Q psy16432 3 LPTSDEQ-KKQDVLKKFMEQHPEMAVR---HQTPIIDGELEHEIKLEESTWVFENAKTVMINMEKILSLF 68 (69)
Q Consensus 3 ipvp~~~-~~kdv~v~i~~~~l~v~vk---g~~~~i~G~L~~~V~~des~Wtied~k~l~I~L~K~~~~~ 68 (69)
|+||+++ +++|+.|+|++++|+|+++ |++++++|+|+++|++|+|+|++++++.|+|+|.|+++.|
T Consensus 35 I~lp~~~~~~kdv~V~i~~~~l~v~~~~~~~~~~~~~~~L~~~I~~e~S~w~i~~~k~v~i~L~K~~~~~ 104 (124)
T 1wgv_A 35 VPVPKHVVKGKQVSVALSSSSIRVAMLEENGERVLMEGKLTHKINTESSLWSLEPGKCVLVNLSKVGEYW 104 (124)
T ss_dssp EECCTTCCSGGGEEEEECSSEEEEEEECSSSEEEEEEEEBSSCBCTTTCEEEECTTSEEEEEECBSSSCC
T ss_pred EEcCCCCCchhheEEEEEcCEEEEEEEccCCCceEEcccccCcCCCcCCEEEEeCCCEEEEEEEECCCCC
Confidence 6899998 9999999999999999995 5567999999999999999999999877999999987655
No 4
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=99.75 E-value=1.7e-18 Score=112.12 Aligned_cols=63 Identities=25% Similarity=0.390 Sum_probs=60.0
Q ss_pred CCCCcccccceeEEEeccCceEEEecccceEEeCccccceeeCcceEEEeCCcEEEEEEEEccc
Q psy16432 3 LPTSDEQKKQDVLKKFMEQHPEMAVRHQTPIIDGELEHEIKLEESTWVFENAKTVMINMEKILS 66 (69)
Q Consensus 3 ipvp~~~~~kdv~v~i~~~~l~v~vkg~~~~i~G~L~~~V~~des~Wtied~k~l~I~L~K~~~ 66 (69)
||||++++++||.|+|++++|+|+++|+ ++++|+|+++|++|+|+|++++++.|+|+|.|+++
T Consensus 29 I~lp~~~~~kdv~V~i~~~~L~v~~kg~-~~l~g~L~~~I~~eeS~w~i~~~k~v~I~L~K~~~ 91 (157)
T 2rh0_A 29 VQVPPGTRAQDIQCGLQSRHVALAVGGR-EILKGKLFDSTIADEGTWTLEDRKMVRIVLTKTKR 91 (157)
T ss_dssp EECCTTCCGGGEEEEECSSEEEEEETTE-EEEEEEBSSCBCGGGCEEEEECCCEEEEEEEBSSC
T ss_pred EECCCCCcccceEEEEecCEEEEEECCE-EEEeeccccccCccccEEEEcCCcEEEEEEEEcCC
Confidence 6899999999999999999999999998 79999999999999999999998779999999885
No 5
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=99.74 E-value=2.7e-18 Score=107.75 Aligned_cols=63 Identities=21% Similarity=0.380 Sum_probs=56.7
Q ss_pred CCCCcccccceeEEEeccCceEEEecccceEEeCccccceeeCcceEEEeCCcEEEEEEEEcccc
Q psy16432 3 LPTSDEQKKQDVLKKFMEQHPEMAVRHQTPIIDGELEHEIKLEESTWVFENAKTVMINMEKILSL 67 (69)
Q Consensus 3 ipvp~~~~~kdv~v~i~~~~l~v~vkg~~~~i~G~L~~~V~~des~Wtied~k~l~I~L~K~~~~ 67 (69)
|+||++++++|+.|+|++++|+|+++|++ +++|+||++|++|+|+|++++++ |+|+|.|+...
T Consensus 20 I~lp~~~~~kdv~V~i~~~~l~v~~~g~~-~~~~~L~~~I~~e~S~w~i~~~k-v~i~L~K~~~~ 82 (131)
T 2o30_A 20 FPVTGDADSSAIKIRMVGKKICVKNQGEI-VIDGELLHEVDVSSLWWVINGDV-VDVNVTKKRNE 82 (131)
T ss_dssp EECC---CCSCEEEEEETTEEEEEETTEE-EEEEEBSSCEEEEEEEEEEETTE-EEEEEEESSCC
T ss_pred EECCCCCCccceEEEEECCEEEEEECCEe-eEccccccccccccCEEEEeCCE-EEEEEEECCCC
Confidence 68999999999999999999999999985 99999999999999999999985 99999998766
No 6
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.49 E-value=8.1e-14 Score=81.38 Aligned_cols=64 Identities=16% Similarity=0.102 Sum_probs=55.9
Q ss_pred CCCCcccccceeEEEeccCceEEEecc---cceEEeCccccceeeCcceEEEeCCcEEEEEEEEccccC
Q psy16432 3 LPTSDEQKKQDVLKKFMEQHPEMAVRH---QTPIIDGELEHEIKLEESTWVFENAKTVMINMEKILSLF 68 (69)
Q Consensus 3 ipvp~~~~~kdv~v~i~~~~l~v~vkg---~~~~i~G~L~~~V~~des~Wtied~k~l~I~L~K~~~~~ 68 (69)
+++| ++.++|+.|+|++++|++.+++ .+..++++|+++|++++|+|+++++ .|+|+|.|++++|
T Consensus 18 i~~~-~v~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~~L~~~I~~~~s~~~~~~~-~l~i~L~K~~~~~ 84 (92)
T 2xcm_C 18 VFAK-GIPKQNVNIDFGEQILSVVIEVPGEDAYYLQPRLFGKIIPDKCKYEVLST-KIEICLAKADIIT 84 (92)
T ss_dssp EECC-SCCGGGEEEEECSSBEEEEECCTTSCCEEECCBBSSCBCGGGCEEEECSS-CEEEEEEBSSSCC
T ss_pred EEEC-CCChHHeEEEEECCEEEEEEEcCCCcEEEEeeEcCCccCchhEEEEEECC-EEEEEEEcCCCCc
Confidence 3454 6789999999999999999974 3578999999999999999999987 5999999987754
No 7
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.47 E-value=1.1e-13 Score=83.99 Aligned_cols=64 Identities=25% Similarity=0.237 Sum_probs=56.7
Q ss_pred CCCCcccccceeEEEeccCceEEEec---ccceEEeCccccceeeCcceEEEeCCcEEEEEEEEccccC
Q psy16432 3 LPTSDEQKKQDVLKKFMEQHPEMAVR---HQTPIIDGELEHEIKLEESTWVFENAKTVMINMEKILSLF 68 (69)
Q Consensus 3 ipvp~~~~~kdv~v~i~~~~l~v~vk---g~~~~i~G~L~~~V~~des~Wtied~k~l~I~L~K~~~~~ 68 (69)
+++| +++++|+.|+|++++|+|.++ +.+..++++|+++|++++|+|+++++ .|+|+|.|++++|
T Consensus 25 i~l~-~v~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~~L~~~I~~e~s~~~~~~~-~l~i~L~K~~~~~ 91 (114)
T 1rl1_A 25 LMIK-NVQKNDVNVEFSEKELSALVKLPSGEDYNLKLELLHPIIPEQSTFKVLST-KIEIKLKKPEAVR 91 (114)
T ss_dssp ECCC-SCCGGGEEEECSSSCEEEEEECTTSSEEEEEECBSSCCCGGGEEEEECSS-SEEEEEECSSCCC
T ss_pred EEeC-CCCHHHCEEEEEcCEEEEEEEeCCCcEEEEEeeCCCcCCccccEEEEECC-EEEEEEEcCCCCc
Confidence 5677 788999999999999999986 34578999999999999999999997 5999999987654
No 8
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.20 E-value=4.5e-11 Score=74.24 Aligned_cols=57 Identities=21% Similarity=0.200 Sum_probs=50.2
Q ss_pred ccceeEEEeccCceEEEeccc---ceEEeC-ccccceeeCcceEEEeCCcEEEEEEEEcccc
Q psy16432 10 KKQDVLKKFMEQHPEMAVRHQ---TPIIDG-ELEHEIKLEESTWVFENAKTVMINMEKILSL 67 (69)
Q Consensus 10 ~~kdv~v~i~~~~l~v~vkg~---~~~i~G-~L~~~V~~des~Wtied~k~l~I~L~K~~~~ 67 (69)
.++++.|+|++++|.|.+++. +..++. +|+++|++++|+|++.++ .|+|+|.|++++
T Consensus 45 ~~~~v~V~~~~~~l~v~~~~~~~~~y~~~~~~L~~~I~~e~S~~~v~~~-kVei~L~K~~~~ 105 (127)
T 1x5m_A 45 PTENVQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTD-TVLILCRKKVEN 105 (127)
T ss_dssp CTTSEEEEECSSEEEEEECSCSSSCEEEEEECBSSCCCTTTCEEEEETT-EEEEEEECSSSS
T ss_pred CccccEEEEEcCEEEEEEEcCCCCcEEEEhHHhcCccCcccCEEEEeCC-EEEEEEEECCCC
Confidence 789999999999999999743 457887 599999999999999875 699999999864
No 9
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=99.19 E-value=5.6e-11 Score=73.73 Aligned_cols=62 Identities=16% Similarity=0.136 Sum_probs=52.8
Q ss_pred CCCCcccccceeEEEeccCceEEEecc----cceEEeCccccceeeCcceEEEeCCcEEEEEEEEccc--cC
Q psy16432 3 LPTSDEQKKQDVLKKFMEQHPEMAVRH----QTPIIDGELEHEIKLEESTWVFENAKTVMINMEKILS--LF 68 (69)
Q Consensus 3 ipvp~~~~~kdv~v~i~~~~l~v~vkg----~~~~i~G~L~~~V~~des~Wtied~k~l~I~L~K~~~--~~ 68 (69)
|++|. ++++.|+|++++|.++.++ ++..++++||++|++++|+|++.++ .|+|+|.|++. .|
T Consensus 19 I~~~~---~~~~~V~~~~~~l~~~~~~~~~~~~y~~~l~L~~~I~~e~S~~~v~~~-kiei~L~K~~~~~~W 86 (125)
T 1ejf_A 19 FCVED---SKDVNVNFEKSKLTFSCLGGSDNFKHLNEIDLFHCIDPNDSKHKRTDR-SILCCLRKGESGQSW 86 (125)
T ss_dssp ECCTT---EEEEEEEEETTEEEEEEEETTTTEEEEEEEEBSSCEEEEEEEEEECSS-CEEEEEEESSTTCCC
T ss_pred EEecC---CCceEEEEECCEEEEEEEeCCCCceEEEEEEccceeccccCEEEECCC-EEEEEEEECCCCCCC
Confidence 45565 4899999999999998753 4579999999999999999999875 69999999974 46
No 10
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.13 E-value=1.6e-10 Score=73.09 Aligned_cols=63 Identities=21% Similarity=0.163 Sum_probs=53.6
Q ss_pred CCCCcccccceeEEEeccCceEEEeccc---------------ceEEeCccccceeeCcceEEEeCCcEEEEEEEEcccc
Q psy16432 3 LPTSDEQKKQDVLKKFMEQHPEMAVRHQ---------------TPIIDGELEHEIKLEESTWVFENAKTVMINMEKILSL 67 (69)
Q Consensus 3 ipvp~~~~~kdv~v~i~~~~l~v~vkg~---------------~~~i~G~L~~~V~~des~Wtied~k~l~I~L~K~~~~ 67 (69)
|+++ ++.++++.|+|++++|.|.+++. ...++++|+++|++++|+|++.++ .|+|+|.|++.+
T Consensus 36 I~~k-~v~~~~v~V~f~~~~l~v~~~~~~~~~l~~~~a~g~~~~y~~~~~L~~~I~pe~S~~~v~~~-kIeI~L~K~e~~ 113 (134)
T 1wh0_A 36 VYVK-EICRDTSRVLFREQDFTLIFQTRDGNFLRLHPGCGPHTTFRWQVKLRNLIEPEQCTFCFTAS-RIDICLRKRQSQ 113 (134)
T ss_dssp EECC-SBCTTSCEEEECSSEEEEEECBCCHHHHHHSTTCCTTSCEEEEEEBSSCEEEEEEEEEECSS-EEEEEEEESSSC
T ss_pred EEeC-CCCcccCEEEEECCEEEEEEEcCCCcccccccccCcceeEEEeccccccCCchhCEEEEeCC-EEEEEEEECCCC
Confidence 3444 57789999999999999998643 357889999999999999999985 699999998764
No 11
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=98.84 E-value=1.7e-09 Score=67.95 Aligned_cols=60 Identities=13% Similarity=0.075 Sum_probs=49.3
Q ss_pred CCCCcccccceeEEEeccCceEEEecc---------cceEEeCccccceeeCcceEEEeCCcEEEEEEEEcc
Q psy16432 3 LPTSDEQKKQDVLKKFMEQHPEMAVRH---------QTPIIDGELEHEIKLEESTWVFENAKTVMINMEKIL 65 (69)
Q Consensus 3 ipvp~~~~~kdv~v~i~~~~l~v~vkg---------~~~~i~G~L~~~V~~des~Wtied~k~l~I~L~K~~ 65 (69)
|++|. .+++.|+|++++|.+...+ ....++++||++|++++|.|++.+++.|+|+|.|++
T Consensus 29 I~~~~---~~~~~V~~~~~~l~~~~~~~~~~g~~~~~~y~~~l~L~~~Idpe~S~~~v~~~~~vei~L~K~~ 97 (134)
T 2cg9_X 29 VSIAD---CDAPELTIKPSYIELKAQSKPHVGDENVHHYQLHIDLYKEIIPEKTMHKVANGQHYFLKLYKKD 97 (134)
T ss_dssp CCCSS---EESCCCCBCSSEEEECCEEC-------CEEBCEEEECSSCCCSSSEEEEECCC--CEEEEEECS
T ss_pred EEecC---CCceEEEEECCEEEEEEecccccCCccCceEEEEEEChhhccccccEEEECCCEEEEEEEEECC
Confidence 44554 3589999999999998754 246899999999999999999987644999999987
No 12
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=98.52 E-value=2.4e-07 Score=59.28 Aligned_cols=56 Identities=13% Similarity=0.007 Sum_probs=47.3
Q ss_pred cceeEEEec-cCceEEEec---ccceEEeCccccceeeCcceEEEeCCcEEEEEEEEccccC
Q psy16432 11 KQDVLKKFM-EQHPEMAVR---HQTPIIDGELEHEIKLEESTWVFENAKTVMINMEKILSLF 68 (69)
Q Consensus 11 ~kdv~v~i~-~~~l~v~vk---g~~~~i~G~L~~~V~~des~Wtied~k~l~I~L~K~~~~~ 68 (69)
.+++.|+|+ .++|.+... |....++.+||++|+++ |.|++.+. .|+|+|.|+++.|
T Consensus 25 ~~~v~V~~~~~~~l~~~~~~~~~~~y~~~l~L~~~Idpe-S~~~v~~~-kIei~L~K~e~~~ 84 (150)
T 2kmw_A 25 AKDISVKCEPQGLFSFSALGAQGERFEFSLELYGKIMTE-YRKNVGLR-NIIFSIQKEERSW 84 (150)
T ss_dssp EEEEEECCCTTEEEEEEEETTTTEEEEEEEEBSSCEEEE-EEEEEESS-SEEEEEEECCSSC
T ss_pred CCceEEEEecCCEEEEEEEcCCCceEEEEeEhhhccccc-ceEEecCC-EEEEEEEECCCCc
Confidence 368999999 789999876 33468999999999999 99999875 6999999987643
No 13
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=96.78 E-value=0.0043 Score=36.42 Aligned_cols=62 Identities=5% Similarity=0.037 Sum_probs=46.1
Q ss_pred CCCcccccceeEEEeccCceEEEecccc--eE-----EeC------ccccceeeCcceEEEeCCcEEEEEEEEcccc
Q psy16432 4 PTSDEQKKQDVLKKFMEQHPEMAVRHQT--PI-----IDG------ELEHEIKLEESTWVFENAKTVMINMEKILSL 67 (69)
Q Consensus 4 pvp~~~~~kdv~v~i~~~~l~v~vkg~~--~~-----i~G------~L~~~V~~des~Wtied~k~l~I~L~K~~~~ 67 (69)
.|| |+++.||.|++..+.|.|.-+-.. -+ -.| .|+..|+++...-+++|| .|.|+|-|....
T Consensus 23 ~lP-G~~~edi~v~~~~~~L~I~g~~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~i~A~~~~G-vL~I~lpK~~~~ 97 (102)
T 4fei_A 23 DVP-GVDAGTLALAEDGGQLTVSGERPGTEHLLRSERPSGRFVRELAFPEPVRPASGVASLAGG-VLTVRFEKLRPT 97 (102)
T ss_dssp ECT-TCCGGGCEEEEETTEEEEEEEECCCSSCSSCCSEEEEEEEEEECSSCBCTTCCEEEEETT-EEEEEEEBSSCC
T ss_pred ECC-CCchHhEEEEEECCEEEEEEEEecCCCEEEEEEeccEEEEEEECCCCcchhHcEEEEECC-EEEEEEEccCcc
Confidence 455 788999999999999888542110 00 111 377889999999999998 899999998753
No 14
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=96.69 E-value=0.0038 Score=36.24 Aligned_cols=61 Identities=8% Similarity=0.010 Sum_probs=44.6
Q ss_pred CCCcccccceeEEEeccCceEEEecccc-------eE---------EeC--ccccceeeCcceEEEeCCcEEEEEEEEcc
Q psy16432 4 PTSDEQKKQDVLKKFMEQHPEMAVRHQT-------PI---------IDG--ELEHEIKLEESTWVFENAKTVMINMEKIL 65 (69)
Q Consensus 4 pvp~~~~~kdv~v~i~~~~l~v~vkg~~-------~~---------i~G--~L~~~V~~des~Wtied~k~l~I~L~K~~ 65 (69)
.|| |+++.||.|++..+.|.|.-.... -+ +.- .|+..|+++...-+++|| .|.|+|-|..
T Consensus 21 ~lP-G~~~edi~v~~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~vd~~~i~A~~~~G-vL~I~~pK~~ 98 (100)
T 3gla_A 21 DLP-GIDPSQIEVQMDKGILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADGITAAGRNG-VLEIRIPKRP 98 (100)
T ss_dssp ECT-TSCGGGCEEEEETTEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBCTTSCEEEEETT-EEEEEEEBC-
T ss_pred ECC-CCCHHHEEEEEECCEEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCcChHHeEEEEeCC-EEEEEEecCC
Confidence 344 788999999999999988642210 01 111 477789999999999997 8999999976
Q ss_pred c
Q psy16432 66 S 66 (69)
Q Consensus 66 ~ 66 (69)
+
T Consensus 99 ~ 99 (100)
T 3gla_A 99 A 99 (100)
T ss_dssp -
T ss_pred C
Confidence 4
No 15
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=96.42 E-value=0.0071 Score=34.77 Aligned_cols=61 Identities=10% Similarity=0.117 Sum_probs=44.4
Q ss_pred CCCcccccceeEEEeccCceEEEecccc-----eEEeC------ccccceeeCcceEEE-eCCcEEEEEEEEccc
Q psy16432 4 PTSDEQKKQDVLKKFMEQHPEMAVRHQT-----PIIDG------ELEHEIKLEESTWVF-ENAKTVMINMEKILS 66 (69)
Q Consensus 4 pvp~~~~~kdv~v~i~~~~l~v~vkg~~-----~~i~G------~L~~~V~~des~Wti-ed~k~l~I~L~K~~~ 66 (69)
.|| |+++.||.|++..+.|.|.-+... -++.. .|+..|+++.-.=++ +|| .|.|+|-|..+
T Consensus 13 dlP-G~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~vd~~~i~A~~~~~G-vL~I~~pK~~~ 85 (90)
T 2y1y_A 13 DVK-HFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSMSSDG-VLTVNGPRKQV 85 (90)
T ss_dssp ECT-TSCGGGEEEEEETTEEEEEEEEEEEECSSSEEEEEEEEEEECCTTBCGGGCEEEECTTS-EEEEEECBC--
T ss_pred ECC-CCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCC-EEEEEEEcCCC
Confidence 455 889999999999998888664221 12212 366788888888999 787 89999988653
No 16
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=96.28 E-value=0.011 Score=35.72 Aligned_cols=61 Identities=8% Similarity=0.113 Sum_probs=45.8
Q ss_pred CCCcccccceeEEEecc-CceEEEecccce----E--------EeC--ccccceeeCcc-eEEEeCCcEEEEEEEEccc
Q psy16432 4 PTSDEQKKQDVLKKFME-QHPEMAVRHQTP----I--------IDG--ELEHEIKLEES-TWVFENAKTVMINMEKILS 66 (69)
Q Consensus 4 pvp~~~~~kdv~v~i~~-~~l~v~vkg~~~----~--------i~G--~L~~~V~~des-~Wtied~k~l~I~L~K~~~ 66 (69)
.|| |+++.||.|++.. +.|.|.-+.... + +.- .|+..|+++.- .=+++|| .|.|++-|..+
T Consensus 41 ~lP-G~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~Er~~~f~R~~~LP~~vd~~~i~~A~~~~G-vL~I~lPK~~~ 117 (123)
T 3aab_A 41 DLA-GFNKEKIKARVSGQNELIIEAEREITEPGVKYLTQRPKYVRKVIRLPYNVAKDAEISGKYENG-VLTIRIPIAGT 117 (123)
T ss_dssp ECC-SCCGGGCEEEEETTTEEEEEEECCCCCCSCEEEECSCSEEEEEEECSSEECTTCCCEEEEETT-EEEEEEEGGGE
T ss_pred ECC-CCCHHHEEEEEeCCCEEEEEEEEeccCCCeEEEEEEeEEEEEEEECCCCcCcchhCeeEEcCC-EEEEEEEcCCC
Confidence 344 7889999999999 999987653211 1 111 46778888988 8899998 89999998754
No 17
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=96.27 E-value=0.024 Score=35.61 Aligned_cols=58 Identities=21% Similarity=0.290 Sum_probs=44.0
Q ss_pred ccccceeEEEeccCceEEEecccc--------eEE-----eC------ccccceeeCcceEEEeCCcEEEEEEEEccc
Q psy16432 8 EQKKQDVLKKFMEQHPEMAVRHQT--------PII-----DG------ELEHEIKLEESTWVFENAKTVMINMEKILS 66 (69)
Q Consensus 8 ~~~~kdv~v~i~~~~l~v~vkg~~--------~~i-----~G------~L~~~V~~des~Wtied~k~l~I~L~K~~~ 66 (69)
|+++.||.|++..+.|.|.-+-.. .+. .| .|+..|+++...-+++|| .|.|+|-|..+
T Consensus 76 G~~~edi~V~~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~i~A~~~nG-vL~I~lpK~~~ 152 (161)
T 4eld_A 76 GVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENASAKFENG-VLSVILPKAES 152 (161)
T ss_dssp TCCGGGEEEEEETTEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGGCEEEEETT-EEEEEEEBCGG
T ss_pred CCChHhEEEEEECCEEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCcccccEEEEEECC-EEEEEEEcCCC
Confidence 678899999999999888553221 111 12 377789999999999998 89999999754
No 18
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=96.05 E-value=0.014 Score=34.32 Aligned_cols=61 Identities=15% Similarity=0.193 Sum_probs=45.4
Q ss_pred CCCcccccceeEEEeccCceEEEecccc-----eEEeC------ccccceeeCcceEEE-eCCcEEEEEEEEccc
Q psy16432 4 PTSDEQKKQDVLKKFMEQHPEMAVRHQT-----PIIDG------ELEHEIKLEESTWVF-ENAKTVMINMEKILS 66 (69)
Q Consensus 4 pvp~~~~~kdv~v~i~~~~l~v~vkg~~-----~~i~G------~L~~~V~~des~Wti-ed~k~l~I~L~K~~~ 66 (69)
.|| |+++.||.|++..+.|.|.-+... -++.. .|+..|+++.-.=++ +|| .|.|++-|..+
T Consensus 18 dlP-G~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~nG-vL~I~lPK~~~ 90 (101)
T 2wj5_A 18 DVK-HFSPEEISVKVVGDHVEVHARHEERPDEHGFIAREFHRRYRLPPGVDPAAVTSALSPEG-VLSIQATPASA 90 (101)
T ss_dssp ECT-TSCGGGEEEEEETTEEEEEEEEEECSSTTCCEEEEEEEEEECCTTBCTTCCEEEECTTS-EEEEEECBCCC
T ss_pred ECC-CCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHCEEEECCCC-EEEEEEECCCc
Confidence 455 889999999999998888653221 12111 466788999899999 787 89999998654
No 19
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=95.93 E-value=0.028 Score=33.28 Aligned_cols=60 Identities=17% Similarity=0.194 Sum_probs=45.4
Q ss_pred CCcccccceeEEEeccCceEEEecccc-----eEEeC------ccccceeeCcceEEE-eCCcEEEEEEEEccc
Q psy16432 5 TSDEQKKQDVLKKFMEQHPEMAVRHQT-----PIIDG------ELEHEIKLEESTWVF-ENAKTVMINMEKILS 66 (69)
Q Consensus 5 vp~~~~~kdv~v~i~~~~l~v~vkg~~-----~~i~G------~L~~~V~~des~Wti-ed~k~l~I~L~K~~~ 66 (69)
|| |+++.||.|++..+.|.|.-+... -++.. .|+..|+++.-.=++ +|| .|.|+|-|...
T Consensus 20 lP-G~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~~G-vL~I~~PK~~~ 91 (106)
T 3l1e_A 20 VK-HFSPEDLTVKVQEDFVEIHGKHNERQDDHGYISREFHRRYRLPSNVDQSALSCSLSADG-MLTFSGPKIPS 91 (106)
T ss_dssp CT-TSCGGGEEEEEETTEEEEEEEEEEEETTTEEEEEEEEEEEECCTTBCTTSCEEEECTTS-EEEEEEEBCCC
T ss_pred CC-CCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCC-EEEEEEEccCc
Confidence 44 789999999999999888653221 13333 456688899889999 787 89999999754
No 20
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=94.87 E-value=0.1 Score=32.62 Aligned_cols=61 Identities=18% Similarity=0.134 Sum_probs=44.6
Q ss_pred CCCcccccceeEEEe-ccCceEEEecccc-------eEE-----eC------ccccceeeCcceEEEeCCcEEEEEEEEc
Q psy16432 4 PTSDEQKKQDVLKKF-MEQHPEMAVRHQT-------PII-----DG------ELEHEIKLEESTWVFENAKTVMINMEKI 64 (69)
Q Consensus 4 pvp~~~~~kdv~v~i-~~~~l~v~vkg~~-------~~i-----~G------~L~~~V~~des~Wtied~k~l~I~L~K~ 64 (69)
.|| |+++.||.|++ ..+.|.|.-+... -++ .| .|+..|+++...=+++|| .|.|+|-|.
T Consensus 60 dlP-Gv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~~nG-vL~I~lPK~ 137 (151)
T 1gme_A 60 DLP-GVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKAGLENG-VLTVTVPKA 137 (151)
T ss_dssp ECT-TCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGGGCEEEEETT-EEEEEEECC
T ss_pred ECC-CCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCccccceEEEEECC-EEEEEEEcc
Confidence 344 78899999999 5678888753221 122 13 366788888888999998 899999997
Q ss_pred cc
Q psy16432 65 LS 66 (69)
Q Consensus 65 ~~ 66 (69)
.+
T Consensus 138 ~~ 139 (151)
T 1gme_A 138 EV 139 (151)
T ss_dssp CC
T ss_pred Cc
Confidence 54
No 21
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=94.59 E-value=0.12 Score=29.18 Aligned_cols=56 Identities=11% Similarity=0.104 Sum_probs=42.1
Q ss_pred ccccceeEEEeccCceEEEecccc-----eEEeC------ccccceeeCcceEEEe-CCcEEEEEEEEc
Q psy16432 8 EQKKQDVLKKFMEQHPEMAVRHQT-----PIIDG------ELEHEIKLEESTWVFE-NAKTVMINMEKI 64 (69)
Q Consensus 8 ~~~~kdv~v~i~~~~l~v~vkg~~-----~~i~G------~L~~~V~~des~Wtie-d~k~l~I~L~K~ 64 (69)
|+++.||.|++..+.|.|.-+-.. -+..| .|+..|+++.-.=++. || .|.|+|-|.
T Consensus 17 G~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~~~~~G-vL~I~lPK~ 84 (85)
T 3q9p_A 17 HFAPDELTVKTKDGVVEITGKHAARQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEG-TLTVEAPMP 84 (85)
T ss_dssp TTCCSEEEEEEETTEEEEEEEEC-------CCCEEEEEEEECCTTCCGGGCEEEECTTS-EEEEEEECC
T ss_pred CCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChHHcEEEECCCC-EEEEEEEcC
Confidence 789999999999999888654221 12333 3666788888888887 77 899999885
No 22
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=94.43 E-value=0.096 Score=33.75 Aligned_cols=61 Identities=10% Similarity=0.119 Sum_probs=44.3
Q ss_pred CCCcccccceeEEEeccCceEEEecccc-----eEEeC------ccccceeeCcceEEE-eCCcEEEEEEEEccc
Q psy16432 4 PTSDEQKKQDVLKKFMEQHPEMAVRHQT-----PIIDG------ELEHEIKLEESTWVF-ENAKTVMINMEKILS 66 (69)
Q Consensus 4 pvp~~~~~kdv~v~i~~~~l~v~vkg~~-----~~i~G------~L~~~V~~des~Wti-ed~k~l~I~L~K~~~ 66 (69)
.|| |+++.||.|++..+.|.|.-+.+. -++.. .|+..|+++.-.=++ +|| .|.|++-|..+
T Consensus 80 dlP-G~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~reF~R~~~LP~~Vd~~~i~A~~s~dG-vL~I~lPK~~~ 152 (175)
T 2klr_A 80 DVK-HFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSLSSDG-VLTVNGPRKQV 152 (175)
T ss_dssp CCS-SCCGGGEEEEEETTEEEEEEEEEEEEETTEEEEEEEEEEEECTTTCCTTTCEEEECTTS-CEEEEEECC--
T ss_pred ECC-CCChHHEEEEEECCEEEEEEEEcccccCCceEEEEEEEEEECCCCcChhHeEEEEcCCC-EEEEEEECCCC
Confidence 344 788999999999998888654321 12222 467788999999999 787 89999999653
No 23
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=90.94 E-value=0.78 Score=32.04 Aligned_cols=58 Identities=7% Similarity=0.054 Sum_probs=44.3
Q ss_pred ccccceeEEEeccCceEEEecccc----eEEeC------ccccceeeCcceEEEe-CCcEEEEEEEEccc
Q psy16432 8 EQKKQDVLKKFMEQHPEMAVRHQT----PIIDG------ELEHEIKLEESTWVFE-NAKTVMINMEKILS 66 (69)
Q Consensus 8 ~~~~kdv~v~i~~~~l~v~vkg~~----~~i~G------~L~~~V~~des~Wtie-d~k~l~I~L~K~~~ 66 (69)
|+++.||.|++..+.|.|.-+... -...| .|+..|+++.-.=+++ || .|.|+|-|...
T Consensus 122 G~~~edI~V~v~~~~L~I~ge~~~~~e~~r~~g~F~R~~~LP~~Vd~e~i~A~~~~nG-VL~I~lPK~~~ 190 (314)
T 2bol_A 122 NFKAEEITIKADKNKLVVRAQKSVACGDAAMSESVGRSIPLPPSVDRNHIQATITTDD-VLVIEAPVNEP 190 (314)
T ss_dssp TCCTTTEEEEEETTEEEEEECCBSSTTCCCBCCCEEEEEECCTTBCGGGCEEEECSSS-EEEEEEEBSSC
T ss_pred CCchHHeEEEEECCEEEEEEEEeccCCCCEEEEEEEEEEECCCCccccccEEEEeCCC-EEEEEEeccCc
Confidence 778999999999999888664321 12223 3667888898999999 77 89999999754
No 24
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=88.49 E-value=1.2 Score=31.10 Aligned_cols=60 Identities=5% Similarity=-0.085 Sum_probs=43.3
Q ss_pred CCCcccccceeEEEeccCceEEEecccc--------eEEeCc------cccceeeCcceEEEeCCcEEEEEEEEc
Q psy16432 4 PTSDEQKKQDVLKKFMEQHPEMAVRHQT--------PIIDGE------LEHEIKLEESTWVFENAKTVMINMEKI 64 (69)
Q Consensus 4 pvp~~~~~kdv~v~i~~~~l~v~vkg~~--------~~i~G~------L~~~V~~des~Wtied~k~l~I~L~K~ 64 (69)
+|.+|+++.||.|++..+.|.|.-+-.. -..-|. |+..|+++.-.=+++|| .|.|++-|.
T Consensus 240 ~ldPG~~~edi~V~v~~~~LtI~ge~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~~dG-vL~i~~Pk~ 313 (314)
T 2bol_A 240 KVDPHFAPKDVKVWAKGNKVYVHGVTGKEEKTENASHSEHREFYKAFVTPEVVDASKTQAEIVDG-LMVVEAPLF 313 (314)
T ss_dssp ECCTTCCGGGEEEEESSSEEEEEEEEC------------CEEEEEEEECSSEECGGGCEEEEETT-EEEEEEEEE
T ss_pred EcCCCCChHHeEEEEECCEEEEEEEEeccCCceEEEEEeeeEEEEEEECCCCcChHHeEEEEeCC-EEEEEEecC
Confidence 3435899999999999999888653221 122333 45678888888889987 899999885
No 25
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=84.39 E-value=4.1 Score=24.93 Aligned_cols=54 Identities=9% Similarity=0.062 Sum_probs=34.3
Q ss_pred cceeEEEeccCceEEEecccceEEeCccccceeeCcc---eEEEeCCcEEEEEEEEcccc
Q psy16432 11 KQDVLKKFMEQHPEMAVRHQTPIIDGELEHEIKLEES---TWVFENAKTVMINMEKILSL 67 (69)
Q Consensus 11 ~kdv~v~i~~~~l~v~vkg~~~~i~G~L~~~V~~des---~Wtied~k~l~I~L~K~~~~ 67 (69)
+.++.+.+..+-+....+ |=+|.=.|+++|.-|+. +|-.++| .+.|.|-|.+.+
T Consensus 42 a~~~ei~vd~~~F~F~~~--PYyLRL~lP~~vved~~~~A~YD~d~g-~~~v~lpK~~~G 98 (115)
T 3eud_A 42 AVGLEIIIQENMIIFHLS--PYYLRLRFPHELIDDERSTAQYDSKDE-CINVKVAKLNKN 98 (115)
T ss_dssp SSSCEEEEETTEEEEEET--TEEEEEECSSCEECSTTCEEEEETTTT-EEEEEEEESSTT
T ss_pred cCccEEEEeCCEEEEecC--CeEEEEecCcceecCCCcceEEeCCCc-EEEEEEcCCcCC
Confidence 344444455554444443 33556677888855444 6777776 899999998754
No 26
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=83.26 E-value=1.7 Score=27.24 Aligned_cols=54 Identities=9% Similarity=0.071 Sum_probs=34.6
Q ss_pred cceeEEEeccCceEEEecccceEEeCccccce-eeCc--ceEEEeCCcEEEEEEEEcccc
Q psy16432 11 KQDVLKKFMEQHPEMAVRHQTPIIDGELEHEI-KLEE--STWVFENAKTVMINMEKILSL 67 (69)
Q Consensus 11 ~kdv~v~i~~~~l~v~vkg~~~~i~G~L~~~V-~~de--s~Wtied~k~l~I~L~K~~~~ 67 (69)
+.++.+.+..+-+.+..+ +=+|.=.|+++| +.+. +.|-.+.| .++|+|-|.+.+
T Consensus 28 ~sdiei~v~~~~F~F~~~--PYyLRL~LP~~V~e~~~~kA~YD~d~~-~~~VtLpK~~~G 84 (134)
T 2k8q_A 28 AVGLEIIIQENMIIFHLS--PYYLRLRFPHELIDDERSTAQYDSKDE-CINVKVAKLNKN 84 (134)
T ss_dssp SSSCCCEECSSSEEECSS--SSCEEECCSSCEECCSSCEEEEETTTT-EEEEEEEESSTT
T ss_pred ccccEEEEeCCEEEEecC--CeEEEecCCCeeecCCCcceeEeccCC-EEEEEEeCCCCC
Confidence 445555555555555544 235666788888 4333 56777776 799999998754
No 27
>1spp_A Major seminal plasma glycoprotein PSP-I; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1
Probab=46.01 E-value=20 Score=20.15 Aligned_cols=20 Identities=10% Similarity=0.448 Sum_probs=14.8
Q ss_pred eCcceEEEe--CCcEEEEEEEE
Q psy16432 44 LEESTWVFE--NAKTVMINMEK 63 (69)
Q Consensus 44 ~des~Wtie--d~k~l~I~L~K 63 (69)
.-+|+|+|. .|+.|.|++..
T Consensus 24 ~~~C~w~I~~~~g~~I~l~f~~ 45 (109)
T 1spp_A 24 KTECVWTLQVDPKYKLLVSIPT 45 (109)
T ss_dssp CSEEEEEEECCTTSEEEEEEEE
T ss_pred CCcEEEEEEcCCCCEEEEEEee
Confidence 457999998 46778777654
No 28
>3kt9_A Aprataxin; FHA domain, beta sandwich, beta sheet, AMP hydrolase, alternative splicing, disease mutation, DNA damage, DNA repair, DNA-binding; 1.65A {Homo sapiens} SCOP: b.26.1.0
Probab=44.50 E-value=46 Score=19.41 Aligned_cols=50 Identities=12% Similarity=0.025 Sum_probs=32.7
Q ss_pred cccccceeEEEecc--CceEEEeccc-ceEEeCccccceeeCcceEEEeCCcEEEEE
Q psy16432 7 DEQKKQDVLKKFME--QHPEMAVRHQ-TPIIDGELEHEIKLEESTWVFENAKTVMIN 60 (69)
Q Consensus 7 ~~~~~kdv~v~i~~--~~l~v~vkg~-~~~i~G~L~~~V~~des~Wtied~k~l~I~ 60 (69)
+-.+.+++.+.... ..+.|.-.|. +.+++| ..+..++.++ +.+|..|++.
T Consensus 38 krcSR~h~~L~~~~~~g~v~vk~lg~Np~~vng---~~l~k~~~~~-L~~GD~l~Ll 90 (102)
T 3kt9_A 38 KKCSRQQVQLKAECNKGYVKVKQVGVNPTSIDS---VVIGKDQEVK-LQPGQVLHMV 90 (102)
T ss_dssp TTSCSSCEEEEEETTTTEEEEEECSSSCCEETT---EECCBTCEEE-ECTTCCEEEE
T ss_pred CcccCcceEEEEecCCCEEEEEECcCCCCeECC---EEcCCCCeEE-eCCCCEEEEc
Confidence 34567777776664 4667766655 568877 4666776654 8888766664
No 29
>1spp_B Major seminal plasma glycoprotein PSP-II; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1
Probab=42.00 E-value=25 Score=19.92 Aligned_cols=20 Identities=15% Similarity=0.255 Sum_probs=14.8
Q ss_pred eCcceEEEe--CCcEEEEEEEE
Q psy16432 44 LEESTWVFE--NAKTVMINMEK 63 (69)
Q Consensus 44 ~des~Wtie--d~k~l~I~L~K 63 (69)
.-+|+|+|. .|+.|.|++..
T Consensus 27 ~~~C~w~I~~~~g~~I~l~f~~ 48 (116)
T 1spp_B 27 KNLCTWTILMKPDQKVRMAIPY 48 (116)
T ss_dssp CSEEEEEEECCTTCEEEEEEEE
T ss_pred CCCEEEEEEeCCCCEEEEEEee
Confidence 467999998 36777777654
No 30
>1gjj_A LAP2; inner nuclear membrane protein, lamin-associated polypeptide, LEM domain, multidimensional dipolar couplings; NMR {Homo sapiens} SCOP: a.140.1.1 a.140.1.1 PDB: 1h9e_A 1h9f_A
Probab=41.98 E-value=2.2 Score=27.76 Aligned_cols=28 Identities=18% Similarity=0.239 Sum_probs=24.5
Q ss_pred CCCCCCcccccceeEEEeccCceEEEec
Q psy16432 1 MGLPTSDEQKKQDVLKKFMEQHPEMAVR 28 (69)
Q Consensus 1 ~~ipvp~~~~~kdv~v~i~~~~l~v~vk 28 (69)
+|++||.+-..|||.|++-.+||.+.-+
T Consensus 23 ~nV~LP~g~~rKdvYVqLYl~hlt~~n~ 50 (168)
T 1gjj_A 23 NNVTLPAGEQRKDVYVQLYLQHLTARNR 50 (168)
T ss_dssp TTCCCCSSCCEHHHHHHEEEEBBTTTCC
T ss_pred cCCCCCCCccchhHHHHHHHHHHHhcCC
Confidence 5899999999999999999999887543
No 31
>3hun_A Penicillin-binding protein 4; ampicillin, beta-lactamase, serine type D-Ala, D-Ala-carboxypeptidase, antibiotics; HET: ZZ7; 2.00A {Staphylococcus aureus} PDB: 3hum_A*
Probab=41.73 E-value=15 Score=26.93 Aligned_cols=41 Identities=7% Similarity=0.116 Sum_probs=29.6
Q ss_pred CCCcccccceeEEEeccCceEEEecccceEEeCcc-ccceeeCc
Q psy16432 4 PTSDEQKKQDVLKKFMEQHPEMAVRHQTPIIDGEL-EHEIKLEE 46 (69)
Q Consensus 4 pvp~~~~~kdv~v~i~~~~l~v~vkg~~~~i~G~L-~~~V~~de 46 (69)
-+|.+..++++++.+..+.+.|....+ +|.|.. +-.|+++.
T Consensus 364 ~vpk~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~v~~~~ 405 (453)
T 3hun_A 364 VLPSDFSKKDYKLVVEDGKVHADYPRE--FINKDYGPPTVEVHQ 405 (453)
T ss_dssp EEETTCCGGGSEEEEETTEEEEECSCC--BSSTTCCSCCEEEEC
T ss_pred EeecCCcccccEEEEecCcEEEecCce--eCCCCCCCCceEeec
Confidence 367777778889999888877776655 777766 55565554
No 32
>1sfp_A ASFP; spermadhesin, bovine seminal plasma protein, acidic seminal fluid protein, CUB domain, X-RAY growth factor; 1.90A {Bos taurus} SCOP: b.23.1.1
Probab=39.29 E-value=30 Score=19.49 Aligned_cols=20 Identities=10% Similarity=0.338 Sum_probs=14.7
Q ss_pred eCcceEEEe--CCcEEEEEEEE
Q psy16432 44 LEESTWVFE--NAKTVMINMEK 63 (69)
Q Consensus 44 ~des~Wtie--d~k~l~I~L~K 63 (69)
.-+|+|+|. .|+.|.|++..
T Consensus 28 ~~~C~w~I~~~~g~~I~l~f~~ 49 (114)
T 1sfp_A 28 KTNCVWTIQMPPEYHVRVSIQY 49 (114)
T ss_dssp CSEEEEEEECCTTCEEEEEEEE
T ss_pred CCCEEEEEEeCCCCEEEEEEee
Confidence 457999998 36777777654
No 33
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=37.95 E-value=39 Score=21.70 Aligned_cols=45 Identities=13% Similarity=0.176 Sum_probs=23.4
Q ss_pred CCCCcccccceeEEEeccCceEEEecccceEEeCccccceeeCcceEEEeCCcEEEE
Q psy16432 3 LPTSDEQKKQDVLKKFMEQHPEMAVRHQTPIIDGELEHEIKLEESTWVFENAKTVMI 59 (69)
Q Consensus 3 ipvp~~~~~kdv~v~i~~~~l~v~vkg~~~~i~G~L~~~V~~des~Wtied~k~l~I 59 (69)
+++|++ |.|++..+.++| +|- .|+|...+.+..-.=.++++ .|.+
T Consensus 6 I~IP~g-----V~v~i~~~~vtV--kGp----kG~L~~~~~~~~v~i~~~~~-~i~v 50 (178)
T 1vq8_E 6 LEIPED-----VDAEQDHLDITV--EGD----NGSVTRRLWYPDIDVSVDGD-TVVI 50 (178)
T ss_dssp EECCTT-----CEEEEETTEEEE--EET----TEEEEEECCCTTCEEEEETT-EEEE
T ss_pred EEcCCC-----CEEEEeCCEEEE--ECC----CeEEEEEEECCeEEEEEECC-EEEE
Confidence 345555 677777765544 333 13444444334444556776 3444
No 34
>3vwc_A Serine protease inhibitor 1; sulphur SAD phasing, beta trefoil, serine proteas hydrolase inhibitor; 1.50A {Coprinopsis cinerea} PDB: 3n0k_A
Probab=32.31 E-value=92 Score=19.56 Aligned_cols=48 Identities=8% Similarity=0.225 Sum_probs=34.7
Q ss_pred CCcc-cccceeEEEeccCceEEEecccc-eEEeCcccccee--eCcceEEEe
Q psy16432 5 TSDE-QKKQDVLKKFMEQHPEMAVRHQT-PIIDGELEHEIK--LEESTWVFE 52 (69)
Q Consensus 5 vp~~-~~~kdv~v~i~~~~l~v~vkg~~-~~i~G~L~~~V~--~des~Wtie 52 (69)
+|++ ..+....+.=..+...+..+|.+ ..++|.+|...- .+.+.|.|+
T Consensus 36 ~p~~~~~~~~w~ve~~g~~Y~L~~~G~Pta~iDg~VFa~Ll~~~~~~kW~it 87 (149)
T 3vwc_A 36 LPEDNNSGNSWVVEKDDDAYILYCKGAPVAPQEGKLFADLLGNMEDKKWIVT 87 (149)
T ss_dssp CCTTSCTTCCEEEEEETTEEEEEETTEEEEEETTEEEECSSSCCCCCCEEEE
T ss_pred eCCCCcccceEEEEecCCEEEEEeCCCCceeeCCcEEEEeecCCCCcEEEEE
Confidence 4553 44677788888899999999984 357787776542 356679999
No 35
>1tvf_A PBP4, penicillin binding protein 4; structural genomics, nysgxrc target, SAV0642, PSI, protein structure initiative; 2.00A {Staphylococcus aureus} SCOP: b.105.1.2 e.3.1.1
Probab=31.65 E-value=21 Score=25.09 Aligned_cols=36 Identities=8% Similarity=0.061 Sum_probs=17.8
Q ss_pred CCcccccceeEEEeccCceEEEecccceEEeCccccce
Q psy16432 5 TSDEQKKQDVLKKFMEQHPEMAVRHQTPIIDGELEHEI 42 (69)
Q Consensus 5 vp~~~~~kdv~v~i~~~~l~v~vkg~~~~i~G~L~~~V 42 (69)
+|.+...+++.+.+....+.+..+++ ++.+.+..+|
T Consensus 329 ~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~ 364 (369)
T 1tvf_A 329 LPSDFSKKDYKLVVEDGKVHADYPRE--FINKDYGPPT 364 (369)
T ss_dssp EETTCCGGGCEEEEETTEEEEECSCC--BSSTTCCSCC
T ss_pred EeCCCcccceEEEEeCCEEEEEecce--ecccccCCCe
Confidence 34443444555555555555555443 5555555544
No 36
>2wno_A Tumor necrosis factor-inducible gene 6 protein; glycoprotein, cell adhesion, extracellular matrix; 2.30A {Homo sapiens}
Probab=29.13 E-value=52 Score=19.59 Aligned_cols=19 Identities=5% Similarity=0.254 Sum_probs=14.1
Q ss_pred CcceEEEeC--CcEEEEEEEE
Q psy16432 45 EESTWVFEN--AKTVMINMEK 63 (69)
Q Consensus 45 des~Wtied--~k~l~I~L~K 63 (69)
-+|+|+|.- |..|.|++..
T Consensus 31 ~~C~W~I~~~~g~~I~L~F~~ 51 (149)
T 2wno_A 31 QICYWHIRLKYGQRIHLSFLD 51 (149)
T ss_dssp CEEEEEEECCTTCEEEEEEEE
T ss_pred CEEEEEEEECCCCEEEEEEEE
Confidence 479999984 6677777654
No 37
>2w9x_A AXE2A, CJCE2B, putative acetyl xylan esterase; carbohydrate esterase family 2, hydrolase; 2.00A {Cellvibrio japonicus}
Probab=28.95 E-value=72 Score=21.58 Aligned_cols=57 Identities=12% Similarity=0.098 Sum_probs=31.4
Q ss_pred cceeEEEeccCceEEEeccc----ceEEeCccccceeeCcce-EEE---eCCcEEEEEEEEccccC
Q psy16432 11 KQDVLKKFMEQHPEMAVRHQ----TPIIDGELEHEIKLEEST-WVF---ENAKTVMINMEKILSLF 68 (69)
Q Consensus 11 ~kdv~v~i~~~~l~v~vkg~----~~~i~G~L~~~V~~des~-Wti---ed~k~l~I~L~K~~~~~ 68 (69)
.-.+.+.|++.++.+.+.+. .++|+|++...+...+.. -.+ .+| .=.|.|.|..|.|
T Consensus 54 G~~~~~~f~gt~~~~~~~~~~~~~~v~vDg~~~~~~~~~~~~~~~~~~l~~~-~h~v~l~k~te~~ 118 (366)
T 2w9x_A 54 AVYFETAFKGQSLTLKFDDDQNIFRLIVDDKAPVVINKPGKVDYPVESLAPG-KHRVRLEKLTETQ 118 (366)
T ss_dssp TCEEEECC-CCCCCEEEEESSCEEEEEC--CCCEEEECCEEEEEC----------CEEEEECSCCS
T ss_pred CEEEEEEEEeCEEEEEEeCCCcEEEEEECCeEEEEEEcCCceEEeccCCCCC-cEEEEEEEeccCc
Confidence 55677788888888887643 368999988766543333 222 333 3467777876653
No 38
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=26.95 E-value=53 Score=19.23 Aligned_cols=19 Identities=16% Similarity=0.345 Sum_probs=13.3
Q ss_pred CcceEEEeC--CcEEEEEEEE
Q psy16432 45 EESTWVFEN--AKTVMINMEK 63 (69)
Q Consensus 45 des~Wtied--~k~l~I~L~K 63 (69)
-+|+|+|.- |..|.|++..
T Consensus 21 ~~C~w~I~~~~g~~I~l~f~~ 41 (159)
T 1nzi_A 21 VEKSWDIEVPEGYGIHLYFTH 41 (159)
T ss_dssp EEEEEEEECCTTEEEEEEEEE
T ss_pred CCEEEEEEeCCCCEEEEEEeE
Confidence 469999984 5567776653
No 39
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=25.03 E-value=46 Score=19.24 Aligned_cols=36 Identities=8% Similarity=0.070 Sum_probs=17.6
Q ss_pred eeEEEeccCceEEEecccceEEeCccccceeeCcceEEEeCC
Q psy16432 13 DVLKKFMEQHPEMAVRHQTPIIDGELEHEIKLEESTWVFENA 54 (69)
Q Consensus 13 dv~v~i~~~~l~v~vkg~~~~i~G~L~~~V~~des~Wtied~ 54 (69)
.|.|++..+.++| +|-. |+|...+..+.-.=.+|++
T Consensus 22 gV~V~i~~~~VtV--KGPk----G~L~~~~~h~~v~i~~e~~ 57 (100)
T 2cql_A 22 NVDITLKGRTVIV--KGPR----GTLRRDFNHINVELSLLGK 57 (100)
T ss_dssp SCEEEEETTEEEE--EETT----EEEEEECCSSCCEEEEECS
T ss_pred CCEEEEeCCEEEE--ECCC----ceEEEEeccCcEEEEEcCC
Confidence 3677777776554 3321 3344444323333455665
No 40
>3v2d_H 50S ribosomal protein L6; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_F 2hgj_H 2hgq_H 2hgu_H 1vsa_F 2j03_H 2jl6_H 2jl8_H 2v47_H 2v49_H 2wdi_H 2wdj_H 2wdl_H 2wdn_H 2wh2_H 2wh4_H 2wrj_H 2wrl_H 2wro_H 2wrr_H ...
Probab=24.97 E-value=1.4e+02 Score=18.97 Aligned_cols=39 Identities=13% Similarity=0.175 Sum_probs=19.0
Q ss_pred eEEEeccCceEEEecccceEEeCccccceeeCcceEEEeCCcEEEEE
Q psy16432 14 VLKKFMEQHPEMAVRHQTPIIDGELEHEIKLEESTWVFENAKTVMIN 60 (69)
Q Consensus 14 v~v~i~~~~l~v~vkg~~~~i~G~L~~~V~~des~Wtied~k~l~I~ 60 (69)
|.|++..+.+.| +|-.=-|.-+|.+.|. =+++++ .|.+.
T Consensus 15 V~v~i~~~~v~V--kGpkG~L~~~~~~~v~-----i~~~~~-~l~v~ 53 (180)
T 3v2d_H 15 VSVEVAPGRVKV--KGPKGELEVPVSPEMR-----VVVEEG-VVRVE 53 (180)
T ss_dssp CEEEEETTEEEE--ECSSCEEEEECCTTSE-----EEEETT-EEEEE
T ss_pred cEEEEeCCEEEE--EeCCcEEEEEeCCCEE-----EEEECC-EEEEE
Confidence 677777765544 4431123333433333 346765 45443
No 41
>3poj_A Mannan-binding lectin serine protease 1; CUB domain, Ca2+ binding site, complex with ethylamine, COMP protein, lectin pathway of complement; 1.45A {Rattus norvegicus} PDB: 3pob_A 3pof_A 3pog_A 3poi_A 3poe_A
Probab=24.14 E-value=35 Score=19.00 Aligned_cols=30 Identities=17% Similarity=0.267 Sum_probs=17.6
Q ss_pred EEeCccccce-eeCcceEEEeC--CcEEEEEEE
Q psy16432 33 IIDGELEHEI-KLEESTWVFEN--AKTVMINME 62 (69)
Q Consensus 33 ~i~G~L~~~V-~~des~Wtied--~k~l~I~L~ 62 (69)
|-.-.+++.- ..-+|+|+|.- |..|.|.+.
T Consensus 16 i~SP~yP~~Yp~~~~C~w~I~~~~g~~i~l~f~ 48 (115)
T 3poj_A 16 ITSPDYPNPYPKSSECSYTIDLEEGFMVTLQFE 48 (115)
T ss_dssp EECTTTTSCCCTTCEEEEEEECCTTCCCEEEEC
T ss_pred EcCCCCCcCCcCCCeEEEEEEcCCCCEEEEEEe
Confidence 4444444433 23469999984 556777664
No 42
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=23.14 E-value=68 Score=19.15 Aligned_cols=31 Identities=10% Similarity=0.230 Sum_probs=17.9
Q ss_pred EEeCcccccee-eCcceEEEeC--CcEEEEEEEE
Q psy16432 33 IIDGELEHEIK-LEESTWVFEN--AKTVMINMEK 63 (69)
Q Consensus 33 ~i~G~L~~~V~-~des~Wtied--~k~l~I~L~K 63 (69)
|-.-.+++.-. .-+|+|+|.- |..|.|++..
T Consensus 15 i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~l~f~~ 48 (170)
T 1szb_A 15 LASPGFPGEYANDQERRWTLTAPPGYRLRLYFTH 48 (170)
T ss_dssp EECTTTTSCCCSSCEEEEEEECCTTEEEEEEEEE
T ss_pred EECCCCCcCCcCCCcEEEEEEcCCCCEEEEEEEE
Confidence 33334444332 3469999983 5667776653
No 43
>2wao_A Endoglucanase E; plant cell WALL degradation, carbohydrate metabolism, polysaccharide degradation, esterase, hydrolase, cellulases; HET: BGC; 1.80A {Clostridium thermocellum} PDB: 2wab_A*
Probab=22.46 E-value=1.7e+02 Score=19.27 Aligned_cols=59 Identities=14% Similarity=0.129 Sum_probs=38.6
Q ss_pred ccceeEEEeccCceEEEeccc-----ceEEeCccccceee--CcceEEEeC---CcEEEEEEEEccccC
Q psy16432 10 KKQDVLKKFMEQHPEMAVRHQ-----TPIIDGELEHEIKL--EESTWVFEN---AKTVMINMEKILSLF 68 (69)
Q Consensus 10 ~~kdv~v~i~~~~l~v~vkg~-----~~~i~G~L~~~V~~--des~Wtied---~k~l~I~L~K~~~~~ 68 (69)
.+-.+.+.|++.++.|.+... .++|+|.+...+.. .+++-.+-+ ...=.|.|.|..|.|
T Consensus 30 ~g~~~~~~~~g~~~~~~~~~~~~~~~~v~vdg~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~e~~ 98 (341)
T 2wao_A 30 SGSNVELNFYGTEASVTIKSGGENWFQAIVDGNPLPPFSVNATTSTVKLVSGLAEGAHHLVLWKRTEAS 98 (341)
T ss_dssp TTCEEEEEEEESCEEEEEEEEEEEEEEEEETTEECCCEEEEEEEEEEEEECSCCSEEEEEEEEECSCGG
T ss_pred cceEEEEEEEcCEEEEEEecCCCcEEEEEECCeEEEEEEEcCCCceEEeccCCCCCcEEEEEEEecccc
Confidence 356688889999998887332 25899999876644 344434432 234577888877654
No 44
>4a5p_A Protein MXIA, protein VIRH; protein transport, type three secretion, export apparatus; HET: MLY; 3.15A {Shigella flexneri}
Probab=20.90 E-value=53 Score=23.44 Aligned_cols=35 Identities=3% Similarity=-0.049 Sum_probs=23.9
Q ss_pred CCCCCCcccccceeEEEeccCceEEEecccceEEeCcc
Q psy16432 1 MGLPTSDEQKKQDVLKKFMEQHPEMAVRHQTPIIDGEL 38 (69)
Q Consensus 1 ~~ipvp~~~~~kdv~v~i~~~~l~v~vkg~~~~i~G~L 38 (69)
+|+++|+-.-. | +..+.++...+.++|. ++-.|++
T Consensus 89 lG~vlP~IrIr-D-n~~L~p~~Y~I~i~gv-~va~gel 123 (383)
T 4a5p_A 89 YGVRLPTILYR-T-SNELXVDDIVLLINEV-RADSFNI 123 (383)
T ss_dssp TCCCCCCCEEE-E-ESSSCSSEEEEEETTE-EEEEEEC
T ss_pred cCCCCCceEEE-E-CcccCCcceEEEEccc-ccccccc
Confidence 58888885322 2 3457888888888887 4555554
Done!