BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16433
(297 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9BXF3|CECR2_HUMAN Cat eye syndrome critical region protein 2 OS=Homo sapiens GN=CECR2
PE=1 SV=2
Length = 1484
Score = 205 bits (521), Expect = 3e-52, Method: Composition-based stats.
Identities = 121/302 (40%), Positives = 174/302 (57%), Gaps = 36/302 (11%)
Query: 3 DIQSWWEVPSIAHFCSLFRAAFNLLDFDIEELEEALLTDGTEDTGSSLLQELIVRLLCGC 62
+++SWWEVP+IAHFCSLFR AF L DF+IEELE AL D E + +LI LL GC
Sbjct: 13 ELRSWWEVPAIAHFCSLFRTAFRLPDFEIEELEAALHRDDVE-----FISDLIACLLQGC 67
Query: 63 YGRNHGISIFNYQMFLRRLFRTKCR-EYGRENPFDSDIDFQFLPLRTKVEILQALCDFRL 121
Y R I+ + +L + + E G+ NP + FQ LPLRT+VEIL LCD+RL
Sbjct: 68 YQR-RDITPQTFHSYLEDIINYRWELEEGKPNPL-REASFQDLPLRTRVEILHRLCDYRL 125
Query: 122 DADDVLDCLKNLESDSLRLQPLGYDRNQSAFWYFYGTRLYREDYPKVVSQIVFQSITGPQ 181
DADDV D LK L++DSLR++PLG D + + +WYFYGTR+Y+ED + G
Sbjct: 126 DADDVFDLLKGLDADSLRVEPLGEDNSGALYWYFYGTRMYKED-----------PVQGKS 174
Query: 182 VGIWTLFLKTVHTKKKKKRKLSALWKALKKKKEAPPKRGRKRIRPLDPSEEEPEFEL--- 238
G +L + + ++ +S++ K++ PPKR +K + SE++ E L
Sbjct: 175 NGELSL-----SRESEGQKNVSSIPGKTGKRRGRPPKR-KKLQEEILLSEKQEENSLASE 228
Query: 239 --------DLGAGTWQVVCYTEEDWTKLAEATADAPCKEEKTLHHVLTEDFLPEIPRLFE 290
G GTW ++C TEE+W ++ E+ + E+ L+ +L+EDFLPEI +
Sbjct: 229 PQTRHGSQGPGQGTWWLLCQTEEEWRQVTESFRERTSLRERQLYKLLSEDFLPEICNMIA 288
Query: 291 EK 292
+K
Sbjct: 289 QK 290
>sp|Q5HYC2|K2026_HUMAN Uncharacterized protein KIAA2026 OS=Homo sapiens GN=KIAA2026 PE=2
SV=2
Length = 2103
Score = 43.1 bits (100), Expect = 0.002, Method: Composition-based stats.
Identities = 59/253 (23%), Positives = 102/253 (40%), Gaps = 52/253 (20%)
Query: 4 IQSWWEVPSIAHFCSLFRAAFNLLDFDIEELEEALLTDGTEDTGSSLLQELIVRLLCGCY 63
+++ WE+P+I HF L + NL + ELE LL ++ L +++ LL +
Sbjct: 298 METMWEIPAIGHFLCLAQQILNLPEIVFYELERCLLMPQC----NAFLSKIMTSLLSPPH 353
Query: 64 GRN--HGISIFNYQMFLRRLFRTKCREY---------------------------GRENP 94
R H Y+ + L R K +++ G NP
Sbjct: 354 RRPTLHRRPTLPYRTWEAAL-RQKVQQWYTAVGQTENPDNCAEKLGLCPQFFKVLGEVNP 412
Query: 95 FDSDIDFQFLPLRTKVEILQALCDFRLDAD-DVLDCLKNLESDSLRLQPLGYDRNQSAFW 153
+ F LP KV +L+ LCDF + +V D + R LGYD ++A+
Sbjct: 413 LEEK-PFHELPFYQKVWLLKGLCDFVYETQKEVQDAVLGQPIHECREVILGYDYLENAYV 471
Query: 154 YF-----YGTRLYRE------DYPKVVSQIVFQSITGPQVGIWTLFLKTVHTKKKKKR-K 201
+F R+Y++ ++P + I Q + P++ + L V T + R
Sbjct: 472 HFPQFCGADVRIYKQRPFQAPEFP--IPPIKIQRV--PRIKLEKLKCDYVSTSNGEHRCS 527
Query: 202 LSALWKALKKKKE 214
+L + KK++E
Sbjct: 528 RDSLPSSFKKEQE 540
>sp|Q96T23|RSF1_HUMAN Remodeling and spacing factor 1 OS=Homo sapiens GN=RSF1 PE=1 SV=2
Length = 1441
Score = 35.0 bits (79), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 104 LPLRTKVEILQALCDFRLDADDVLDCLKNLE-SDSLRLQPLGYDRNQSAFWYF----YGT 158
+ + K+ +L+ LC+ + D + + N E +D++RLQP+G D++ +WY +
Sbjct: 114 MSVECKLALLKYLCECQFDDNLKFKNIINEEDADTMRLQPIGRDKDGLMYWYQLDQDHNV 173
Query: 159 RLYRED 164
R+Y E+
Sbjct: 174 RMYIEE 179
>sp|A8JQ65|DGKH_DROME Diacylglycerol kinase eta OS=Drosophila melanogaster GN=CG34384
PE=2 SV=1
Length = 1895
Score = 32.7 bits (73), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 84 TKCREYGRENPFDSDIDFQFLPLRTKVEILQALCDFR 120
+ C + G P + +DF +P+ T I+ LCD+R
Sbjct: 791 SPCSDAGENTPTERKVDFLRVPIHTGEPIVDPLCDYR 827
>sp|F5HC79|TRM1_HCMVM Tripartite terminase subunit UL28 homolog OS=Human cytomegalovirus
(strain Merlin) GN=UL56 PE=3 SV=1
Length = 850
Score = 32.3 bits (72), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 109 KVEILQALCDFRLDADDV---LDCLKNLESDSLRLQPLGYDRNQSAFWYFYGTRLYREDY 165
++ +LQ LC ++ L+CLK + + L + + RN +A Y LYR+ Y
Sbjct: 2 EMNLLQKLCVVCSKCNEYAMELECLKYCDPNVLLAESTPFKRNAAAIVY-----LYRKIY 56
Query: 166 PKVVSQIVFQS 176
P+VV+Q QS
Sbjct: 57 PEVVAQNRTQS 67
>sp|P16724|TRM1_HCMVA Tripartite terminase subunit UL28 homolog OS=Human cytomegalovirus
(strain AD169) GN=UL56 PE=3 SV=1
Length = 850
Score = 32.3 bits (72), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 109 KVEILQALCDFRLDADDV---LDCLKNLESDSLRLQPLGYDRNQSAFWYFYGTRLYREDY 165
++ +LQ LC ++ L+CLK + + L + + RN +A Y LYR+ Y
Sbjct: 2 EMNLLQKLCVVCSKCNEYAMELECLKYCDPNVLLAESTPFKRNAAAIVY-----LYRKIY 56
Query: 166 PKVVSQIVFQS 176
P+VV+Q QS
Sbjct: 57 PEVVAQNRTQS 67
>sp|B4PRE2|DGKH_DROYA Diacylglycerol kinase eta OS=Drosophila yakuba GN=GE24946 PE=3 SV=2
Length = 1917
Score = 32.3 bits (72), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 84 TKCREYGRENPFDSDIDFQFLPLRTKVEILQALCDFR 120
+ C + G P + +DF +P+ T I+ LCD+R
Sbjct: 794 SPCSDGGENTPTERKVDFLRVPIHTGEPIVDPLCDYR 830
>sp|B4R0A5|DGKH_DROSI Diacylglycerol kinase eta OS=Drosophila simulans GN=GD19954 PE=3
SV=2
Length = 1905
Score = 32.3 bits (72), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 84 TKCREYGRENPFDSDIDFQFLPLRTKVEILQALCDFR 120
+ C + G P + +DF +P+ T I+ LCD+R
Sbjct: 794 SPCSDGGENTPTERKVDFLRVPIHTGEPIVDPLCDYR 830
>sp|B3NYS4|DGKH_DROER Diacylglycerol kinase eta OS=Drosophila erecta GN=GG14241 PE=3 SV=2
Length = 1918
Score = 32.3 bits (72), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 84 TKCREYGRENPFDSDIDFQFLPLRTKVEILQALCDFR 120
+ C + G P + +DF +P+ T I+ LCD+R
Sbjct: 794 SPCSDGGENTPTERKVDFLRVPIHTGEPIVDPLCDYR 830
>sp|Q12830|BPTF_HUMAN Nucleosome-remodeling factor subunit BPTF OS=Homo sapiens GN=BPTF
PE=1 SV=3
Length = 3046
Score = 31.6 bits (70), Expect = 6.9, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 126 VLDCLKNLESDS--LRLQPLGYDRNQSAFWYFYGTRLYRED 164
V DC+ ++ + +R +P+GYDR++ +W+ + ED
Sbjct: 442 VTDCVAEIQKNKPYIRHEPIGYDRSRRKYWFLNRRLIIEED 482
>sp|Q54ST3|Y2237_DICDI DDT domain-containing protein DDB_G0282237 OS=Dictyostelium
discoideum GN=DDB_G0282237 PE=3 SV=1
Length = 885
Score = 31.6 bits (70), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Query: 133 LESDSLRLQPLGYDRNQSAFWYFYG--TRLYRED 164
LE S RL+ LG DRN +WY+Y +++Y E+
Sbjct: 767 LEKYSTRLESLGRDRNYRNYWYWYQLPSKIYVEN 800
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.139 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 116,769,313
Number of Sequences: 539616
Number of extensions: 5020149
Number of successful extensions: 14254
Number of sequences better than 100.0: 21
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 14225
Number of HSP's gapped (non-prelim): 31
length of query: 297
length of database: 191,569,459
effective HSP length: 117
effective length of query: 180
effective length of database: 128,434,387
effective search space: 23118189660
effective search space used: 23118189660
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)