Query psy16433
Match_columns 297
No_of_seqs 159 out of 297
Neff 6.5
Searched_HMMs 13730
Date Fri Aug 16 21:11:09 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16433.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/16433hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2cupa3 g.39.1.3 (A:8-34) Four 60.6 1.5 0.00011 24.1 1.0 14 141-154 6-23 (27)
2 d1ecia_ a.33.1.1 (A:) Ectatomi 28.2 1.7 0.00012 25.1 -2.4 14 244-257 7-20 (37)
3 d1tdha3 g.39.1.8 (A:247-290) E 27.0 12 0.00085 22.7 1.3 27 125-157 9-38 (44)
4 d1o6wa2 b.72.1.1 (A:30-75) Spl 15.9 30 0.0022 21.1 1.5 12 146-157 21-32 (46)
5 d1o6wa1 b.72.1.1 (A:1-29) Spli 15.5 34 0.0025 18.9 1.5 11 145-155 8-18 (29)
6 d1ywia1 b.72.1.1 (A:15-42) Hun 15.1 30 0.0022 18.9 1.2 10 145-154 7-16 (28)
7 d2rm0w1 b.72.1.1 (W:1-37) Form 14.0 38 0.0028 19.6 1.5 13 145-157 12-24 (37)
8 d2jmfa1 b.72.1.1 (A:521-553) U 13.7 42 0.003 18.9 1.6 9 146-154 12-20 (33)
9 d2ho2a1 b.72.1.1 (A:253-285) A 12.4 41 0.003 19.0 1.3 12 146-157 12-23 (33)
10 d2ysca1 b.72.1.1 (A:8-33) Amyl 11.9 30 0.0022 18.5 0.5 11 146-156 11-21 (26)
No 1
>d2cupa3 g.39.1.3 (A:8-34) Four and a half LIM domains protein 1, FHL-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=60.57 E-value=1.5 Score=24.09 Aligned_cols=14 Identities=36% Similarity=1.009 Sum_probs=11.8
Q ss_pred ccccccCC----CcEEEE
Q psy16433 141 QPLGYDRN----QSAFWY 154 (297)
Q Consensus 141 ePlG~D~~----g~~Yw~ 154 (297)
.|||.|+. .|+||.
T Consensus 6 kpigad~ke~h~knr~wh 23 (27)
T d2cupa3 6 KPIGADSKEVHYKNRFWH 23 (27)
T ss_dssp CBCCSSSCEEEETTEEEE
T ss_pred CCcCcchHHhhccccccc
Confidence 69999995 689995
No 2
>d1ecia_ a.33.1.1 (A:) Ectatomin subunit A, EA {Ant (Ectatomma tuberculatum), venom [TaxId: 39300]}
Probab=28.17 E-value=1.7 Score=25.07 Aligned_cols=14 Identities=50% Similarity=1.156 Sum_probs=12.0
Q ss_pred ceEEEecCHHHHHH
Q psy16433 244 TWQVVCYTEEDWTK 257 (297)
Q Consensus 244 ~We~v~~t~ee~~~ 257 (297)
-||+||-|.|-|..
T Consensus 7 iwetvcptvepwak 20 (37)
T d1ecia_ 7 IWETVCPTVEPWAK 20 (37)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHhCCcccHHHH
Confidence 59999999999863
No 3
>d1tdha3 g.39.1.8 (A:247-290) Endonuclease VIII-like 1 (NEIL1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.05 E-value=12 Score=22.73 Aligned_cols=27 Identities=22% Similarity=0.384 Sum_probs=17.7
Q ss_pred hHHHHhccC---CCCccccccccccCCCcEEEEEeC
Q psy16433 125 DVLDCLKNL---ESDSLRLQPLGYDRNQSAFWYFYG 157 (297)
Q Consensus 125 ~vr~~ik~~---d~~~lR~ePlG~D~~g~~Yw~f~d 157 (297)
.+..++.=+ ...++| |++|++-|+.+|
T Consensus 9 ~F~~WLqCY~~pgM~sL~------D~~GRTIWF~Gd 38 (44)
T d1tdha3 9 AFRAWLRCYGMPGMSSLQ------DRHGRTIWFQGD 38 (44)
T ss_dssp HHHHHCSSTTCTTCEEEE------CTTSCEEEESSC
T ss_pred HHHHHHHHHcCCchhhhh------ccCCCEEEecCC
Confidence 344555433 334565 999999998765
No 4
>d1o6wa2 b.72.1.1 (A:30-75) Splicing factor prp40 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=15.92 E-value=30 Score=21.12 Aligned_cols=12 Identities=8% Similarity=0.293 Sum_probs=9.1
Q ss_pred cCCCcEEEEEeC
Q psy16433 146 DRNQSAFWYFYG 157 (297)
Q Consensus 146 D~~g~~Yw~f~d 157 (297)
|.+|+.|||=..
T Consensus 21 ~~~Gr~YYyN~~ 32 (46)
T d1o6wa2 21 TADGKVYYYNPT 32 (46)
T ss_dssp CTTCCEEEEETT
T ss_pred CCCCCEEEEECC
Confidence 668999998544
No 5
>d1o6wa1 b.72.1.1 (A:1-29) Splicing factor prp40 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=15.52 E-value=34 Score=18.86 Aligned_cols=11 Identities=18% Similarity=0.449 Sum_probs=8.5
Q ss_pred ccCCCcEEEEE
Q psy16433 145 YDRNQSAFWYF 155 (297)
Q Consensus 145 ~D~~g~~Yw~f 155 (297)
.+.+|+.|||=
T Consensus 8 ~~~~G~~YYyN 18 (29)
T d1o6wa1 8 KDASGRIYYYN 18 (29)
T ss_dssp ECTTCCEEEEE
T ss_pred ECCCCCEEEeE
Confidence 46789999873
No 6
>d1ywia1 b.72.1.1 (A:15-42) Huntingtin-interacting protein HYPA/FBP11 {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.11 E-value=30 Score=18.92 Aligned_cols=10 Identities=10% Similarity=0.537 Sum_probs=7.6
Q ss_pred ccCCCcEEEE
Q psy16433 145 YDRNQSAFWY 154 (297)
Q Consensus 145 ~D~~g~~Yw~ 154 (297)
.+.+|+.|||
T Consensus 7 ~~~~G~~YYy 16 (28)
T d1ywia1 7 KSPDGRTYYY 16 (28)
T ss_dssp EETTTEEEEE
T ss_pred ECCCCCEEEe
Confidence 3667888887
No 7
>d2rm0w1 b.72.1.1 (W:1-37) Formin binding protein FBP28 domain {Domestic mouse (Mus musculus) [TaxId: 10090]}
Probab=13.95 E-value=38 Score=19.58 Aligned_cols=13 Identities=8% Similarity=0.276 Sum_probs=9.6
Q ss_pred ccCCCcEEEEEeC
Q psy16433 145 YDRNQSAFWYFYG 157 (297)
Q Consensus 145 ~D~~g~~Yw~f~d 157 (297)
.|.+|+.|||=..
T Consensus 12 ~~~~Gr~YY~N~~ 24 (37)
T d2rm0w1 12 KTADGKTYYYNNR 24 (37)
T ss_dssp ECTTCCEEEEETT
T ss_pred ECCCCCEEEEECC
Confidence 4778999998443
No 8
>d2jmfa1 b.72.1.1 (A:521-553) Ubiquitin ligase NEDD4 WWIII domain {fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=13.66 E-value=42 Score=18.87 Aligned_cols=9 Identities=11% Similarity=0.268 Sum_probs=7.2
Q ss_pred cCCCcEEEE
Q psy16433 146 DRNQSAFWY 154 (297)
Q Consensus 146 D~~g~~Yw~ 154 (297)
|.+|..||+
T Consensus 12 d~~G~~Yyi 20 (33)
T d2jmfa1 12 TAAGERFFV 20 (33)
T ss_dssp CTTSCEEEE
T ss_pred CCCCCEEEE
Confidence 788988865
No 9
>d2ho2a1 b.72.1.1 (A:253-285) Amyloid beta A4 precursor protein-binding family B member 1, APBB1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.35 E-value=41 Score=19.00 Aligned_cols=12 Identities=17% Similarity=0.490 Sum_probs=9.8
Q ss_pred cCCCcEEEEEeC
Q psy16433 146 DRNQSAFWYFYG 157 (297)
Q Consensus 146 D~~g~~Yw~f~d 157 (297)
|..|..||.+.-
T Consensus 12 D~~G~YYWHipt 23 (33)
T d2ho2a1 12 DTSGTYYWHIPT 23 (33)
T ss_dssp CSSCEEEEETTT
T ss_pred cCCCceEEEecC
Confidence 889999998653
No 10
>d2ysca1 b.72.1.1 (A:8-33) Amyloid beta A4 precursor protein-binding family B member 3, APBB3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.87 E-value=30 Score=18.45 Aligned_cols=11 Identities=18% Similarity=0.492 Sum_probs=9.1
Q ss_pred cCCCcEEEEEe
Q psy16433 146 DRNQSAFWYFY 156 (297)
Q Consensus 146 D~~g~~Yw~f~ 156 (297)
|..|..||.+.
T Consensus 11 D~ag~YyWHiP 21 (26)
T d2ysca1 11 DAAGTYYWHVP 21 (26)
T ss_dssp ETTEEEEEESS
T ss_pred ccCceEEEecc
Confidence 88999999753
Done!