BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16434
(745 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6EE31|TCPQ_CHICK T-complex protein 1 subunit theta OS=Gallus gallus GN=CCT8 PE=1
SV=3
Length = 548
Score = 297 bits (761), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 147/288 (51%), Positives = 191/288 (66%), Gaps = 45/288 (15%)
Query: 172 AAIFQYYDKHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAAT 231
A + + KH+SGLEEAVYRNI ACK+ A T RTAYGPNGMNK+VINH++KLFVTNDAAT
Sbjct: 12 AQMLKEGAKHYSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAAT 71
Query: 232 IIRELEIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLII 291
I+RELE++ HPAAK+++
Sbjct: 72 ILRELEVQ--------------------------------------------HPAAKMLV 87
Query: 292 LGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTLT 351
+ S MQE+E+GDGTNFV++FAG LL A++LLRMGL+ SE++ GY+ A K LEILP L
Sbjct: 88 MASHMQEQEVGDGTNFVLVFAGVLLELAEDLLRMGLSVSEVIEGYEKACKKALEILPDLV 147
Query: 352 CFEVKDVRNVENVTKGIKSAIMSKQYGNEDFLTDLITKACVSILPDGSSSFNVDNVRITK 411
C K++R+V+ V + +++MSKQYGNE FL+ LI +ACVSILPD S FNVDN+R+ K
Sbjct: 148 CCSAKNLRDVDEVASLLHTSVMSKQYGNESFLSKLIAQACVSILPD-SGHFNVDNIRVCK 206
Query: 412 ILGSGLFNSEIVQGMVFKRSVEGDITKQTKAKIAVYTCPVDIATTETK 459
I+G+G+ S ++ GMVF + EGD+T AK AVY+CP D TETK
Sbjct: 207 IVGAGVSASSVLHGMVFNKETEGDVTSVKDAKXAVYSCPFDGMITETK 254
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/111 (67%), Positives = 86/111 (77%)
Query: 605 AKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAK 664
AK AVY+CP D TETKGTVLIK+A+ELM FS+GEEN ++ Q+KAIAD+GANVVV G K
Sbjct: 237 AKXAVYSCPFDGMITETKGTVLIKNAEELMNFSKGEENLMDLQVKAIADSGANVVVTGGK 296
Query: 665 FGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNATALPRLVSTYIKMPSFC 715
DMALHY NKY LM VRLNSK+DLRRLCK V ATALPRL ++ C
Sbjct: 297 VADMALHYANKYNLMIVRLNSKWDLRRLCKTVGATALPRLTPPTLEEMGHC 347
Score = 153 bits (386), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 107/184 (58%), Gaps = 42/184 (22%)
Query: 460 TPPAASELGYADSVAVDELGDTAVVVFKLEAAESRIATLVIRGATENYMDDIERAVDDGV 519
TPP E+G+ +SV + E+GDT VVVFK E + I+T++IRG+T+N MDDIERAVDDGV
Sbjct: 337 TPPTLEEMGHCNSVYLSEVGDTQVVVFKHEKEDGAISTILIRGSTDNLMDDIERAVDDGV 396
Query: 520 NTFKGITK------------------------------------------VFVKTLAENT 537
NTFK +T+ + LAEN+
Sbjct: 397 NTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLDQYAIKKFAEAFEAIPRALAENS 456
Query: 538 GVKSNEVISKLYSAHNEGKKTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAAN 597
GVK+NEVISKLY+ H EG K GFDI E ++V D EAGILD YL K W +K AT+AA
Sbjct: 457 GVKANEVISKLYAVHQEGNKNVGFDIEAEAAAVKDMLEAGILDTYLGKYWGIKLATNAAV 516
Query: 598 TILQ 601
T+L+
Sbjct: 517 TVLR 520
>sp|P42932|TCPQ_MOUSE T-complex protein 1 subunit theta OS=Mus musculus GN=Cct8 PE=1 SV=3
Length = 548
Score = 286 bits (732), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 149/280 (53%), Positives = 193/280 (68%), Gaps = 45/280 (16%)
Query: 180 KHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIE 239
KHFSGLEEAVYRNI ACK+ A T RTAYGPNGMNK+VIN ++KLFVTNDAATI+RELE++
Sbjct: 20 KHFSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINRLEKLFVTNDAATILRELEVQ 79
Query: 240 HPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEE 299
HPAAK+I++ S MQE+
Sbjct: 80 --------------------------------------------HPAAKMIVMASHMQEQ 95
Query: 300 EMGDGTNFVIIFAGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTLTCFEVKDVR 359
E+GDGTNFV++FAGALL A+ LLR+GL+ SE+++GY++A K EILP L C K++R
Sbjct: 96 EVGDGTNFVLVFAGALLELAEELLRIGLSVSEVISGYEIACKKAHEILPELVCCSAKNLR 155
Query: 360 NVENVTKGIKSAIMSKQYGNEDFLTDLITKACVSILPDGSSSFNVDNVRITKILGSGLFN 419
+V+ V+ ++++IMSKQYG+E FL LI +ACVSI PD S +FNVDN+R+ KILGSG+++
Sbjct: 156 DVDEVSSLLRTSIMSKQYGSETFLAKLIAQACVSIFPD-SGNFNVDNIRVCKILGSGIYS 214
Query: 420 SEIVQGMVFKRSVEGDITKQTKAKIAVYTCPVDIATTETK 459
S ++ GMVFK+ EGD+T AKIAVY+CP D TETK
Sbjct: 215 SSVLHGMVFKKETEGDVTSVKDAKIAVYSCPFDGMITETK 254
Score = 152 bits (384), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 105/184 (57%), Gaps = 42/184 (22%)
Query: 460 TPPAASELGYADSVAVDELGDTAVVVFKLEAAESRIATLVIRGATENYMDDIERAVDDGV 519
TPP E+G+ DSV + E+GDT VVVFK E + I+T+V+RG+T+N MDDIERAVDDGV
Sbjct: 337 TPPVQEEMGHCDSVYLSEVGDTQVVVFKHEKEDGAISTIVLRGSTDNLMDDIERAVDDGV 396
Query: 520 NTFKGITK------------------------------------------VFVKTLAENT 537
NTFK +T+ + LAEN+
Sbjct: 397 NTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENS 456
Query: 538 GVKSNEVISKLYSAHNEGKKTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAAN 597
GVK+NEVISKLYS H EG K G DI E +V D EA ILD YL K WA+K AT+AA
Sbjct: 457 GVKANEVISKLYSVHQEGNKNVGLDIEAEVPAVKDMLEASILDTYLGKYWAIKLATNAAV 516
Query: 598 TILQ 601
T+L+
Sbjct: 517 TVLR 520
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/117 (64%), Positives = 87/117 (74%), Gaps = 12/117 (10%)
Query: 605 AKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAK 664
AKIAVY+CP D TETKGTVLIK+A+ELM FS+GEEN ++ Q+KAIA TGANV+V G K
Sbjct: 237 AKIAVYSCPFDGMITETKGTVLIKTAEELMNFSKGEENLMDAQVKAIAGTGANVIVTGGK 296
Query: 665 FGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNATALPRLVSTYIKMPSFCPAPPVQ 721
D+ALHY NKY +M VRLNSK+DLRRLCK V ATALP+L PPVQ
Sbjct: 297 VADIALHYANKYNIMLVRLNSKWDLRRLCKTVGATALPKLT------------PPVQ 341
>sp|A8X6I9|TCPQ_CAEBR T-complex protein 1 subunit theta OS=Caenorhabditis briggsae
GN=cct-8 PE=3 SV=1
Length = 548
Score = 281 bits (720), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 138/280 (49%), Positives = 181/280 (64%), Gaps = 44/280 (15%)
Query: 180 KHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIE 239
+HF G +EAV RNI AC + A +R+AYGPNGMNK+VINHI+KLFVTNDAATI++ELEI+
Sbjct: 19 QHFKGTDEAVQRNIEACTELASQIRSAYGPNGMNKMVINHIEKLFVTNDAATILKELEIQ 78
Query: 240 HPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEE 299
HPAAK+II+ ++MQE+
Sbjct: 79 --------------------------------------------HPAAKIIIMATEMQEK 94
Query: 300 EMGDGTNFVIIFAGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTLTCFEVKDVR 359
++GD TN V+I A ALL +A NL+ MG+TP E+ GY+ A K LEILP+L E D++
Sbjct: 95 QIGDNTNTVVILAAALLEHASNLINMGMTPQEVAAGYEQAAEKALEILPSLVVKEASDMK 154
Query: 360 NVENVTKGIKSAIMSKQYGNEDFLTDLITKACVSILPDGSSSFNVDNVRITKILGSGLFN 419
N+E V + ++SAI SKQY NED + DL+ KACV+ P S +FNVDN+RI KI+GSG+
Sbjct: 155 NIEEVRQYLRSAITSKQYDNEDVIADLVAKACVTTCPANSYNFNVDNIRICKIIGSGVHT 214
Query: 420 SEIVQGMVFKRSVEGDITKQTKAKIAVYTCPVDIATTETK 459
S+++ GMVFKR EG+I A+IAVYTCP D+ TETK
Sbjct: 215 SKVMNGMVFKRGAEGEIRSAQDARIAVYTCPFDLTQTETK 254
Score = 149 bits (377), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 71/135 (52%), Positives = 92/135 (68%)
Query: 586 MWALKYATSAANTILQQTKAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLE 645
M + + A I A+IAVYTCP D+ TETKGTVLI++ADEL+ FS+GEE+++E
Sbjct: 218 MNGMVFKRGAEGEIRSAQDARIAVYTCPFDLTQTETKGTVLIENADELVNFSKGEESEVE 277
Query: 646 EQIKAIADTGANVVVAGAKFGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNATALPRLV 705
EQ+KAIAD G VVVA KFGD+ LH+LNKY +M VRL SKFDLRRLC+ V A R+
Sbjct: 278 EQVKAIADNGVKVVVAAGKFGDLYLHFLNKYKIMAVRLTSKFDLRRLCRTVGAQPQARIC 337
Query: 706 STYIKMPSFCPAPPV 720
+ + + C + V
Sbjct: 338 APAVNLLGHCDSVSV 352
Score = 109 bits (272), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 93/182 (51%), Gaps = 44/182 (24%)
Query: 462 PAASELGYADSVAVDELGDTAVVVFKLEAAESRIATLVIRGATENYMDDIERAVDDGVNT 521
PA + LG+ DSV+V E+GD VVVF + ++AT++IRG++++ +DD+ERAVDD VNT
Sbjct: 339 PAVNLLGHCDSVSVTEIGDENVVVFDKNSETGKVATIIIRGSSQSRIDDVERAVDDAVNT 398
Query: 522 FKGITK------------------------------------------VFVKTLAENTGV 539
+K +TK K +AEN G+
Sbjct: 399 YKALTKDGKLLAGAGAVEIELAKEIESYGAKAPGLEQYAIKKFAHALETLPKAIAENAGM 458
Query: 540 KSNEVISKLYSAHNEGKKTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAANTI 599
+ E ++KLY+ H GKK G D+ V+DA I DLY K A+K AT AA TI
Sbjct: 459 PTTETLTKLYAEHVNGKKNAGIDV--WKREVMDAVAHNIFDLYAGKRLAIKLATDAAATI 516
Query: 600 LQ 601
L+
Sbjct: 517 LK 518
>sp|Q3ZCI9|TCPQ_BOVIN T-complex protein 1 subunit theta OS=Bos taurus GN=CCT8 PE=1 SV=3
Length = 548
Score = 278 bits (711), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 151/288 (52%), Positives = 193/288 (67%), Gaps = 45/288 (15%)
Query: 172 AAIFQYYDKHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAAT 231
A + + KHFSGLEEAVYRNI ACK+ A T RTAYGPNGMNK+VINH++KLFVTNDAAT
Sbjct: 12 AQMLKEGAKHFSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAAT 71
Query: 232 IIRELEIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLII 291
I+RELE++ HPAAK+I+
Sbjct: 72 ILRELEVQ--------------------------------------------HPAAKMIV 87
Query: 292 LGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTLT 351
+ S MQE+E+GDGTNFV++FAGALL A+ LLR+GL+ SE++ GY++A K EILP L
Sbjct: 88 MASHMQEQEVGDGTNFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEILPDLV 147
Query: 352 CFEVKDVRNVENVTKGIKSAIMSKQYGNEDFLTDLITKACVSILPDGSSSFNVDNVRITK 411
C K++R+V+ V+ + +++MSKQYGNE FL LI +ACVSI PD S FNVDN+R+ K
Sbjct: 148 CCSAKNLRDVDEVSSLLHTSVMSKQYGNEVFLAKLIAQACVSIFPD-SGHFNVDNIRVCK 206
Query: 412 ILGSGLFNSEIVQGMVFKRSVEGDITKQTKAKIAVYTCPVDIATTETK 459
ILGSG+ +S ++ GMVFK+ EGD+T AKIAVY+CP D TETK
Sbjct: 207 ILGSGVHSSSVLHGMVFKKETEGDVTSVKDAKIAVYSCPFDGMITETK 254
Score = 156 bits (395), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/111 (68%), Positives = 87/111 (78%)
Query: 605 AKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAK 664
AKIAVY+CP D TETKGTVLIKSA+ELM FS+GEEN ++ Q+KAIADTGANVVV G +
Sbjct: 237 AKIAVYSCPFDGMITETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGR 296
Query: 665 FGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNATALPRLVSTYIKMPSFC 715
DMALHY NKY +M VRLNSK+DLRRLCK V ATALPRL ++ C
Sbjct: 297 VADMALHYANKYNIMLVRLNSKWDLRRLCKTVGATALPRLNPPVLEEMGHC 347
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/183 (45%), Positives = 105/183 (57%), Gaps = 42/183 (22%)
Query: 461 PPAASELGYADSVAVDELGDTAVVVFKLEAAESRIATLVIRGATENYMDDIERAVDDGVN 520
PP E+G+ DSV + E+GDT VVVFK E + I+T+V+RG+T+N MDDIERAVDDGVN
Sbjct: 338 PPVLEEMGHCDSVYLSEVGDTQVVVFKHEKEDGAISTIVLRGSTDNLMDDIERAVDDGVN 397
Query: 521 TFKGITK------------------------------------------VFVKTLAENTG 538
TFK +T+ + LAEN+G
Sbjct: 398 TFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENSG 457
Query: 539 VKSNEVISKLYSAHNEGKKTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAANT 598
VK+NEVISKLY+ H EG K G DI E +V D EAG+LD YL K WA+K AT+AA T
Sbjct: 458 VKANEVISKLYAVHQEGNKNVGLDIEAEVPAVKDMLEAGVLDTYLGKYWAIKLATNAAVT 517
Query: 599 ILQ 601
+L+
Sbjct: 518 VLR 520
>sp|Q4R5J0|TCPQ_MACFA T-complex protein 1 subunit theta OS=Macaca fascicularis GN=CCT8
PE=2 SV=1
Length = 548
Score = 270 bits (690), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 152/288 (52%), Positives = 194/288 (67%), Gaps = 45/288 (15%)
Query: 172 AAIFQYYDKHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAAT 231
A + + KHFSGLEEAVYRNI ACK+ A T RTAYGPNGMNK+VINH++KLFVTNDAAT
Sbjct: 12 AQMLKEGAKHFSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAAT 71
Query: 232 IIRELEIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLII 291
I+RELE++ HPAAK+I+
Sbjct: 72 ILRELEVQ--------------------------------------------HPAAKMIV 87
Query: 292 LGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTLT 351
+ S MQE+E+GDGTNFV++FAGALL A+ LLR+GL+ SE++ GY++A K EILP L
Sbjct: 88 MASHMQEQEVGDGTNFVLVFAGALLELAEELLRIGLSVSEVIEGYEIACRKAHEILPNLV 147
Query: 352 CFEVKDVRNVENVTKGIKSAIMSKQYGNEDFLTDLITKACVSILPDGSSSFNVDNVRITK 411
C K++R+V+ V+ ++++IMSKQYGNE FL LI +ACVSI PD S FNVDN+R+ K
Sbjct: 148 CCSAKNLRDVDEVSSLLRTSIMSKQYGNEVFLAKLIAQACVSIFPD-SGHFNVDNIRVCK 206
Query: 412 ILGSGLFNSEIVQGMVFKRSVEGDITKQTKAKIAVYTCPVDIATTETK 459
ILGSG+ +S ++ GMVFK+ EGD+T AKIAVY+CP D TETK
Sbjct: 207 ILGSGISSSSVLHGMVFKKETEGDVTSVKDAKIAVYSCPFDGTITETK 254
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/111 (68%), Positives = 87/111 (78%)
Query: 605 AKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAK 664
AKIAVY+CP D TETKGTVLIK+A+ELM FS+GEEN ++ Q+KAIADTGANVVV G K
Sbjct: 237 AKIAVYSCPFDGTITETKGTVLIKTAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGK 296
Query: 665 FGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNATALPRLVSTYIKMPSFC 715
DMALHY NKY +M VRLNSK+DLRRLCK V ATALPRL ++ C
Sbjct: 297 VADMALHYANKYNIMLVRLNSKWDLRRLCKTVGATALPRLTPPVLEEMGHC 347
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 106/184 (57%), Gaps = 42/184 (22%)
Query: 460 TPPAASELGYADSVAVDELGDTAVVVFKLEAAESRIATLVIRGATENYMDDIERAVDDGV 519
TPP E+G+ DSV + E+GDT VVVFK E + I+T+V+RG+T+N MDDIERAVDDGV
Sbjct: 337 TPPVLEEMGHCDSVCLSEVGDTQVVVFKHEKEDGAISTIVLRGSTDNLMDDIERAVDDGV 396
Query: 520 NTFKGITK------------------------------------------VFVKTLAENT 537
NTFK +T+ + LAEN+
Sbjct: 397 NTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENS 456
Query: 538 GVKSNEVISKLYSAHNEGKKTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAAN 597
GVK+NEVISKLY+ H EG K G DI E +V D EAGILD YL K WA+K AT+AA
Sbjct: 457 GVKANEVISKLYAVHQEGNKNVGLDIEAEVPAVKDMLEAGILDTYLGKYWAIKLATNAAV 516
Query: 598 TILQ 601
T+L+
Sbjct: 517 TVLR 520
>sp|Q5RAP1|TCPQ_PONAB T-complex protein 1 subunit theta OS=Pongo abelii GN=CCT8 PE=2 SV=3
Length = 548
Score = 269 bits (688), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 151/288 (52%), Positives = 194/288 (67%), Gaps = 45/288 (15%)
Query: 172 AAIFQYYDKHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAAT 231
A + + KHFSGLEEAVYRNI ACK+ A T RTAYGPNGMNK+VINH++KLFVTNDAAT
Sbjct: 12 AQMLKEGAKHFSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAAT 71
Query: 232 IIRELEIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLII 291
I+RELE++ HPAAK+I+
Sbjct: 72 ILRELEVQ--------------------------------------------HPAAKMIV 87
Query: 292 LGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTLT 351
+ S MQE+E+GDGTNFV++FAGALL A+ LLR+GL+ SE++ GY++A K EILP L
Sbjct: 88 MASHMQEQEVGDGTNFVLVFAGALLELAEELLRIGLSVSEVIEGYEIACRKAHEILPNLV 147
Query: 352 CFEVKDVRNVENVTKGIKSAIMSKQYGNEDFLTDLITKACVSILPDGSSSFNVDNVRITK 411
C K++R+++ V+ ++++IMSKQYGNE FL LI +ACVSI PD S FNVDN+R+ K
Sbjct: 148 CCSAKNLRDIDEVSSLLRTSIMSKQYGNEVFLAKLIAQACVSIFPD-SGHFNVDNIRVCK 206
Query: 412 ILGSGLFNSEIVQGMVFKRSVEGDITKQTKAKIAVYTCPVDIATTETK 459
ILGSG+ +S ++ GMVFK+ EGD+T AKIAVY+CP D TETK
Sbjct: 207 ILGSGISSSSVLHGMVFKKETEGDVTSVKDAKIAVYSCPFDGMITETK 254
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/111 (68%), Positives = 87/111 (78%)
Query: 605 AKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAK 664
AKIAVY+CP D TETKGTVLIK+A+ELM FS+GEEN ++ Q+KAIADTGANVVV G K
Sbjct: 237 AKIAVYSCPFDGMITETKGTVLIKTAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGK 296
Query: 665 FGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNATALPRLVSTYIKMPSFC 715
DMALHY NKY +M VRLNSK+DLRRLCK V ATALPRL ++ C
Sbjct: 297 VADMALHYANKYNIMLVRLNSKWDLRRLCKTVGATALPRLTPPVLEEMGHC 347
Score = 153 bits (387), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 106/184 (57%), Gaps = 42/184 (22%)
Query: 460 TPPAASELGYADSVAVDELGDTAVVVFKLEAAESRIATLVIRGATENYMDDIERAVDDGV 519
TPP E+G+ DSV + E+GDT VVVFK E + I+T+V+RG+T+N MDDIERAVDDGV
Sbjct: 337 TPPVLEEMGHCDSVYLSEVGDTQVVVFKHEKEDGAISTIVLRGSTDNLMDDIERAVDDGV 396
Query: 520 NTFKGITK------------------------------------------VFVKTLAENT 537
NTFK +T+ + LAEN+
Sbjct: 397 NTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENS 456
Query: 538 GVKSNEVISKLYSAHNEGKKTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAAN 597
GVK+NEVISKLY+ H EG K G DI E +V D EAGILD YL K WA+K AT+AA
Sbjct: 457 GVKANEVISKLYAVHQEGNKNVGLDIEAEVPAVKDMLEAGILDTYLGKYWAIKLATNAAV 516
Query: 598 TILQ 601
T+L+
Sbjct: 517 TVLR 520
>sp|P50990|TCPQ_HUMAN T-complex protein 1 subunit theta OS=Homo sapiens GN=CCT8 PE=1 SV=4
Length = 548
Score = 269 bits (688), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 151/288 (52%), Positives = 194/288 (67%), Gaps = 45/288 (15%)
Query: 172 AAIFQYYDKHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAAT 231
A + + KHFSGLEEAVYRNI ACK+ A T RTAYGPNGMNK+VINH++KLFVTNDAAT
Sbjct: 12 AQMLKEGAKHFSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAAT 71
Query: 232 IIRELEIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLII 291
I+RELE++ HPAAK+I+
Sbjct: 72 ILRELEVQ--------------------------------------------HPAAKMIV 87
Query: 292 LGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTLT 351
+ S MQE+E+GDGTNFV++FAGALL A+ LLR+GL+ SE++ GY++A K EILP L
Sbjct: 88 MASHMQEQEVGDGTNFVLVFAGALLELAEELLRIGLSVSEVIEGYEIACRKAHEILPNLV 147
Query: 352 CFEVKDVRNVENVTKGIKSAIMSKQYGNEDFLTDLITKACVSILPDGSSSFNVDNVRITK 411
C K++R+++ V+ ++++IMSKQYGNE FL LI +ACVSI PD S FNVDN+R+ K
Sbjct: 148 CCSAKNLRDIDEVSSLLRTSIMSKQYGNEVFLAKLIAQACVSIFPD-SGHFNVDNIRVCK 206
Query: 412 ILGSGLFNSEIVQGMVFKRSVEGDITKQTKAKIAVYTCPVDIATTETK 459
ILGSG+ +S ++ GMVFK+ EGD+T AKIAVY+CP D TETK
Sbjct: 207 ILGSGISSSSVLHGMVFKKETEGDVTSVKDAKIAVYSCPFDGMITETK 254
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/111 (68%), Positives = 87/111 (78%)
Query: 605 AKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAK 664
AKIAVY+CP D TETKGTVLIK+A+ELM FS+GEEN ++ Q+KAIADTGANVVV G K
Sbjct: 237 AKIAVYSCPFDGMITETKGTVLIKTAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGK 296
Query: 665 FGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNATALPRLVSTYIKMPSFC 715
DMALHY NKY +M VRLNSK+DLRRLCK V ATALPRL ++ C
Sbjct: 297 VADMALHYANKYNIMLVRLNSKWDLRRLCKTVGATALPRLTPPVLEEMGHC 347
Score = 153 bits (387), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 106/184 (57%), Gaps = 42/184 (22%)
Query: 460 TPPAASELGYADSVAVDELGDTAVVVFKLEAAESRIATLVIRGATENYMDDIERAVDDGV 519
TPP E+G+ DSV + E+GDT VVVFK E + I+T+V+RG+T+N MDDIERAVDDGV
Sbjct: 337 TPPVLEEMGHCDSVYLSEVGDTQVVVFKHEKEDGAISTIVLRGSTDNLMDDIERAVDDGV 396
Query: 520 NTFKGITK------------------------------------------VFVKTLAENT 537
NTFK +T+ + LAEN+
Sbjct: 397 NTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENS 456
Query: 538 GVKSNEVISKLYSAHNEGKKTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAAN 597
GVK+NEVISKLY+ H EG K G DI E +V D EAGILD YL K WA+K AT+AA
Sbjct: 457 GVKANEVISKLYAVHQEGNKNVGLDIEAEVPAVKDMLEAGILDTYLGKYWAIKLATNAAV 516
Query: 598 TILQ 601
T+L+
Sbjct: 517 TVLR 520
>sp|Q9N358|TCPQ_CAEEL T-complex protein 1 subunit theta OS=Caenorhabditis elegans
GN=cct-8 PE=1 SV=3
Length = 548
Score = 265 bits (677), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 139/280 (49%), Positives = 181/280 (64%), Gaps = 44/280 (15%)
Query: 180 KHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIE 239
+HF G +EAV RNI AC + A +R+AYGPNGMNK+VINHI+KLFVTNDAATI++ELEI+
Sbjct: 19 QHFKGTDEAVQRNIEACTELASQIRSAYGPNGMNKMVINHIEKLFVTNDAATILKELEIQ 78
Query: 240 HPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEE 299
HPAA++II+ ++MQE+
Sbjct: 79 --------------------------------------------HPAARIIIMATEMQEK 94
Query: 300 EMGDGTNFVIIFAGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTLTCFEVKDVR 359
++GD TN V+I A ALL +A NL+ MG+TP E+ GY+ A K LEILPTL E D++
Sbjct: 95 QIGDNTNTVVILAAALLEHAANLIHMGMTPQEVAAGYEQAAEKALEILPTLVVKEATDMK 154
Query: 360 NVENVTKGIKSAIMSKQYGNEDFLTDLITKACVSILPDGSSSFNVDNVRITKILGSGLFN 419
N+E V + I+SAI SKQY NED + DL+ KACV+ P S +FNVDN+RI KI+GSG+
Sbjct: 155 NIEEVRQYIRSAITSKQYDNEDIIADLVAKACVTTCPANSFNFNVDNIRICKIIGSGVHT 214
Query: 420 SEIVQGMVFKRSVEGDITKQTKAKIAVYTCPVDIATTETK 459
S ++ GMVFKR EG+I + A+IAVYTCP D+ TETK
Sbjct: 215 STVMNGMVFKRGAEGEIREARDARIAVYTCPFDLTQTETK 254
Score = 152 bits (385), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 74/138 (53%), Positives = 93/138 (67%)
Query: 584 TKMWALKYATSAANTILQQTKAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQ 643
T M + + A I + A+IAVYTCP D+ TETKGTVLI++ADEL FS+GEE +
Sbjct: 216 TVMNGMVFKRGAEGEIREARDARIAVYTCPFDLTQTETKGTVLIENADELRNFSKGEEAE 275
Query: 644 LEEQIKAIADTGANVVVAGAKFGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNATALPR 703
+EEQ+KAIAD G VVVA KFGDM LH+LNKY +M VRL SKFDLRRLC+ V A R
Sbjct: 276 VEEQVKAIADNGVKVVVAAGKFGDMYLHFLNKYKIMAVRLTSKFDLRRLCRTVGAQPQAR 335
Query: 704 LVSTYIKMPSFCPAPPVQ 721
+ + + + C + VQ
Sbjct: 336 ICAPAVNLLGHCDSVAVQ 353
Score = 110 bits (275), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 94/182 (51%), Gaps = 44/182 (24%)
Query: 462 PAASELGYADSVAVDELGDTAVVVFKLEAAESRIATLVIRGATENYMDDIERAVDDGVNT 521
PA + LG+ DSVAV E+GD VVVF ++ ++AT++IRG++++ +DD+ERAVDD VNT
Sbjct: 339 PAVNLLGHCDSVAVQEIGDENVVVFDKKSETGKVATIIIRGSSQSRIDDVERAVDDAVNT 398
Query: 522 FKGITK------------------------------------------VFVKTLAENTGV 539
+K +TK K +AEN G+
Sbjct: 399 YKALTKDGKLLAGAGAVEIELAKEIESFGAKAPGLEQYAIKKFAHALETLPKAIAENAGM 458
Query: 540 KSNEVISKLYSAHNEGKKTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAANTI 599
+ E ++KLY+ H GKK G DI +DA I DLY K A+K AT AA+TI
Sbjct: 459 PTTETLTKLYAEHVAGKKNAGIDI--WKRETMDAVVNNIFDLYAGKRLAIKLATDAASTI 516
Query: 600 LQ 601
L+
Sbjct: 517 LK 518
>sp|P78921|TCPQ_SCHPO Probable T-complex protein 1 subunit theta OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=cct8 PE=2 SV=3
Length = 546
Score = 258 bits (659), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 124/286 (43%), Positives = 183/286 (63%), Gaps = 44/286 (15%)
Query: 174 IFQYYDKHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATII 233
+F+ + G+E+AV RN +A ++ ++ RT+ GPNG NKIV+NH+ + F+TNDAATII
Sbjct: 13 LFREGYRIMQGVEDAVIRNCNAIRELSEITRTSLGPNGKNKIVVNHLQQTFLTNDAATII 72
Query: 234 RELEIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILG 293
RELE+ HPAAKL++
Sbjct: 73 RELEVI--------------------------------------------HPAAKLVVDA 88
Query: 294 SQMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTLTCF 353
+Q QE E+GD NFV++F G LL A+N++RMGLTP EI GY++AL+ T+E+L +
Sbjct: 89 TQQQENELGDAANFVVVFTGELLAKAENMIRMGLTPLEIAKGYEMALSHTMEVLEEICAD 148
Query: 354 EVKDVRNVENVTKGIKSAIMSKQYGNEDFLTDLITKACVSILPDGSSSFNVDNVRITKIL 413
+++ V + + + K I++ I SKQYGNEDFL+DL+ KA +++LP S FNVDN+R+ KI+
Sbjct: 149 KIETVESEKELIKAIRTCISSKQYGNEDFLSDLVAKAILTVLPKDPSKFNVDNIRVVKIM 208
Query: 414 GSGLFNSEIVQGMVFKRSVEGDITKQTKAKIAVYTCPVDIATTETK 459
GS L+NS++V+GMVF R EG +T+ +AK+AV++CP+DI+ TETK
Sbjct: 209 GSSLYNSQVVKGMVFPREPEGTVTRSKEAKVAVFSCPLDISQTETK 254
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 78/107 (72%)
Query: 598 TILQQTKAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGAN 657
T+ + +AK+AV++CP+DI+ TETKGTVL+ +A E++ FS+GEEN +E IK I D G
Sbjct: 230 TVTRSKEAKVAVFSCPLDISQTETKGTVLLHNAQEMLDFSKGEENLIESHIKEIYDAGVR 289
Query: 658 VVVAGAKFGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNATALPRL 704
VVV D+ LHYLN++ ++ +R+ SKF+LRRLC+ V AT L R+
Sbjct: 290 VVVTSGNVNDLVLHYLNRFEILVIRVPSKFELRRLCRVVGATPLARM 336
Score = 102 bits (255), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 89/182 (48%), Gaps = 43/182 (23%)
Query: 462 PAASELGYADSVAVDELGDTAVVVFKLEAAESRIATLVIRGATENYMDDIERAVDDGVNT 521
P E+G D V E+G V VF+ +R AT+V+RGAT+ Y+DD+ERA+DDGVN
Sbjct: 339 PMPEEMGSVDVVETIEIGGDRVTVFRQVEDITRTATIVLRGATKTYLDDLERAIDDGVNI 398
Query: 522 FKGITK------------------------------------------VFVKTLAENTGV 539
K + K V +T++EN G+
Sbjct: 399 VKALVKDNRLIFGAGASDMQLCIRLISVGEKTPGIYQHAIKQYGEAFEVVPRTISENAGL 458
Query: 540 KSNEVISKLYSAHN-EGKKTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAANT 598
+VISKLY+AH+ E ++ G D+ EN +DA EAGI D+ L K A++ AT T
Sbjct: 459 DPTDVISKLYAAHHKENGESIGVDVECENDGTLDAKEAGIFDVLLAKKSAIRLATETVLT 518
Query: 599 IL 600
+L
Sbjct: 519 VL 520
>sp|Q552J0|TCPQ_DICDI T-complex protein 1 subunit theta OS=Dictyostelium discoideum
GN=cct8 PE=3 SV=1
Length = 537
Score = 248 bits (632), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 123/279 (44%), Positives = 175/279 (62%), Gaps = 44/279 (15%)
Query: 180 KHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIE 239
KHF+G +EA+ RNI A K ++ RT+ GPNGMNK++INH++KLFVTNDAATIIREL++
Sbjct: 13 KHFAGKDEAILRNIDATKQLSEITRTSLGPNGMNKMIINHLEKLFVTNDAATIIRELDVI 72
Query: 240 HPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEE 299
H PAAK++++ +QMQE+
Sbjct: 73 H--------------------------------------------PAAKMLVMAAQMQEQ 88
Query: 300 EMGDGTNFVIIFAGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTLTCFEVKDVR 359
EMGDGTN+V+ G L A LL MGL PSEI+ G++ A AK EI+ ++ + +KD+
Sbjct: 89 EMGDGTNYVVTLTGEFLQKAATLLEMGLHPSEIITGFEKAGAKLQEIIESMIVYNLKDIT 148
Query: 360 NVENVTKGIKSAIMSKQYGNEDFLTDLITKACVSILPDGSSSFNVDNVRITKILGSGLFN 419
+ + VTK +KSAI SKQYG E+FL+++IT AC+ +LP + +FN+DNVR+TKI G G+ +
Sbjct: 149 DKKEVTKCLKSAIASKQYGYEEFLSEIITNACLQVLPKKAVNFNIDNVRVTKIPGGGVTD 208
Query: 420 SEIVQGMVFKRSVEGDITKQTKAKIAVYTCPVDIATTET 458
+ +++G V EG I + KAKIAV+T +D+ TET
Sbjct: 209 TSVIKGFVIPMDAEGTIKRMEKAKIAVFTMGIDLGRTET 247
Score = 123 bits (308), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 99/160 (61%), Gaps = 4/160 (2%)
Query: 556 KKTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAANTILQQTKAKIAVYTCPVD 615
KK F+I+ N V G+ D + K + + A TI + KAKIAV+T +D
Sbjct: 186 KKAVNFNID--NVRVTKIPGGGVTDTSVIKGFVIPM--DAEGTIKRMEKAKIAVFTMGID 241
Query: 616 IATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAKFGDMALHYLNK 675
+ TET G VLI + DEL++FS+GEE+ + E I AIA+TG V+++G+ ++ALHY+ +
Sbjct: 242 LGRTETTGKVLITNEDELLQFSKGEEDSIRETITAIANTGVKVIISGSTVSELALHYIER 301
Query: 676 YGLMGVRLNSKFDLRRLCKAVNATALPRLVSTYIKMPSFC 715
+ +M VR+ SKF LRR+CKA+ AT L +L + + +C
Sbjct: 302 FKIMLVRIQSKFQLRRVCKAIGATPLVKLGAPIPEELGYC 341
Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 98/183 (53%), Gaps = 46/183 (25%)
Query: 462 PAASELGYADSVAVDELGDTAVVVFKLEAAESRIATLVIRGATENYMDDIERAVDDGVNT 521
P ELGY D V V+E+G T +F+ ES I+T+V+RG+T N +DDIERA+DDGVN
Sbjct: 333 PIPEELGYCDEVLVEEIGSTKCCIFRQNKEESEISTIVVRGSTNNILDDIERAIDDGVNV 392
Query: 522 FKGITK------------------------------------------VFVKTLAENTGV 539
FKG+ K + +TLAE +G
Sbjct: 393 FKGMCKDGRFLAGAGAFEIEASRKLQAFADATPGLSQYSIRQYAEAFEIIPRTLAETSGH 452
Query: 540 KSNEVISKLYSAHNEGKKTYGFDI-NGENSSVIDAAEAGILDLYLTKMWALKYATSAANT 598
S++ IS +Y+AH +G YG DI +G+ SV+ E +LD + +K++A+K AT+ ANT
Sbjct: 453 DSSKAISNIYAAHTKGNTNYGLDIESGQPKSVL---EMDVLDAFASKLFAIKLATNTANT 509
Query: 599 ILQ 601
+L+
Sbjct: 510 VLR 512
>sp|P47079|TCPQ_YEAST T-complex protein 1 subunit theta OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CCT8 PE=1 SV=1
Length = 568
Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 164/296 (55%), Gaps = 52/296 (17%)
Query: 172 AAIFQYYDKHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAAT 231
A +F+ +S + + ++I+A ++ T+ GP G NKI++NH+ K+ +TNDAAT
Sbjct: 11 AGLFKQGYNSYSNADGQIIKSIAAIRELHQMCLTSMGPCGRNKIIVNHLGKIIITNDAAT 70
Query: 232 IIRELEIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLII 291
++REL+I HPA K+++
Sbjct: 71 MLRELDIV--------------------------------------------HPAVKVLV 86
Query: 292 LGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTLT 351
+ ++ Q+ +MGDGTN V+I AG LL ++ L+ MGL+ EI+ GY +A TL+ L +
Sbjct: 87 MATEQQKIDMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKELDEMV 146
Query: 352 CFEVKDVRNVENVTKGIKSAIMSKQYGNEDFLTDLITKACVSILPDGSSS-----FNVDN 406
E+ D + + K IK I SK+YG+ED L++L+++A +LP + FNVD+
Sbjct: 147 VGEITDKNDKNELLKMIKPVISSKKYGSEDILSELVSEAVSHVLPVAQQAGEIPYFNVDS 206
Query: 407 VRITKILGSGLFNSEIVQGMVFKRSVEGDI---TKQTKAKIAVYTCPVDIATTETK 459
+R+ KI+G L NS +++GMVF R EG + ++ K K+AV+TCP+DIA TETK
Sbjct: 207 IRVVKIMGGSLSNSTVIKGMVFNREPEGHVKSLSEDKKHKVAVFTCPLDIANTETK 262
Score = 133 bits (334), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 83/107 (77%)
Query: 598 TILQQTKAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGAN 657
++ + K K+AV+TCP+DIA TETKGTVL+ +A E++ FS+GEE Q++ +K IAD G
Sbjct: 238 SLSEDKKHKVAVFTCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVE 297
Query: 658 VVVAGAKFGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNATALPRL 704
+VAGA G++ALHYLN+YG++ +++ SKF+LRRLC+ AT LPRL
Sbjct: 298 CIVAGAGVGELALHYLNRYGILVLKVPSKFELRRLCRVCGATPLPRL 344
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 91/193 (47%), Gaps = 54/193 (27%)
Query: 462 PAASELGYADSVAVDELGDTAVVVFKLEAAE-SRIATLVIRGATENYMDDIERAVDDGVN 520
P ELG ++V E+G V VFK E E SR +T+++RGAT+N +DDIERA+DDGV
Sbjct: 347 PTPEELGLVETVKTMEIGGDRVTVFKQEQGEISRTSTIILRGATQNNLDDIERAIDDGVA 406
Query: 521 TFKGITK--------------------------------------------VFVKTLAEN 536
KG+ K V +TLAE
Sbjct: 407 AVKGLMKPSGGKLLPGAGATEIELISRITKYGERTPGLLQLAIKQFAVAFEVVPRTLAET 466
Query: 537 TGVKSNEVISKLYSAHNEGK----KT----YGFDINGE-NSSVIDAAEAGILDLYLTKMW 587
G+ NEV+ LY+AHN + KT G DI+GE + V D E I D+ TK +
Sbjct: 467 AGLDVNEVLPNLYAAHNVTEPGAVKTDHLYKGVDIDGESDEGVKDIREENIYDMLATKKF 526
Query: 588 ALKYATSAANTIL 600
A+ AT AA T+L
Sbjct: 527 AINVATEAATTVL 539
>sp|P47828|TCPQ_CANAX T-complex protein 1 subunit theta OS=Candida albicans GN=CCT8 PE=3
SV=2
Length = 540
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/266 (35%), Positives = 140/266 (52%), Gaps = 50/266 (18%)
Query: 172 AAIFQYYDKHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAAT 231
+ +F+ FS + A+ RN+ A ++ A + T+ GP+G NKI++N + K F+TNDAAT
Sbjct: 11 SGLFKQGYSSFSNADGAIIRNVEAVREIASILLTSMGPSGRNKIIVNKLGKKFITNDAAT 70
Query: 232 IIRELEIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLII 291
++ ELEI HP K++I
Sbjct: 71 MLNELEIV--------------------------------------------HPVVKILI 86
Query: 292 LGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTLT 351
S+ QE EMGD TN VII AG L A+ LL +GL SEI+ G+ LA ++ TL
Sbjct: 87 QASKQQEFEMGDNTNLVIILAGEFLNVAEKLLTLGLNVSEIIQGFNLA---NKFVMKTLD 143
Query: 352 CFEVKDVRNVE-NVTKGIKSAIMSKQYGNEDFLTDLITKACVSILPDGSSSFNVDNVRIT 410
V+ V + E ++ K +K I +KQYG ED + L+ A ++ +G SFNVDN+R+
Sbjct: 144 ELVVEKVESFETDLLKAVKPVIAAKQYGVEDTIAKLVVDAVALVMKNG--SFNVDNIRVV 201
Query: 411 KILGSGLFNSEIVQGMVFKRSVEGDI 436
K++G+ L S++V+GMVF R EG +
Sbjct: 202 KVMGASLSQSQVVKGMVFPREPEGTV 227
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 87/181 (48%), Gaps = 47/181 (25%)
Query: 462 PAASELGYADSVAVDELGDTAVVVFKLEAAESRIATLVIRGATENYMDDIERAVDDGVNT 521
P E+G D + E+G V +F+ + + SR AT+V+RGAT+N +DDIERA+DDGVN+
Sbjct: 336 PTPDEMGEIDIIETKEIGGDRVTIFRQDESSSRTATIVVRGATQNNLDDIERAIDDGVNS 395
Query: 522 FKGITK-----------------------------------------VFVKTLAENTGVK 540
KG+ K V + LAE +G
Sbjct: 396 IKGLIKDNRLLPGAGAVEIELMKRITAYQSTPGLLQLAIKSFAKAFEVIPRVLAETSGHD 455
Query: 541 SNEVISKLYSAHNEGKKTY-GFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAANTI 599
S+E++SKL++AH E G DI+ + A+ +LD+ TK A+ A A NTI
Sbjct: 456 SSEILSKLHAAHAEDTGLRAGIDIDSG-----EVADTAVLDILATKKSAIDLAVDATNTI 510
Query: 600 L 600
L
Sbjct: 511 L 511
Score = 66.2 bits (160), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 38/50 (76%)
Query: 655 GANVVVAGAKFGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNATALPRL 704
G ++ G+ G++ALHYLNKYG++ +R+ SKFDLRR+C+ AT LPRL
Sbjct: 284 GLRWLLPGSSVGELALHYLNKYGILVLRVPSKFDLRRICQVCGATPLPRL 333
>sp|P50016|THS_METKA Thermosome subunit OS=Methanopyrus kandleri (strain AV19 / DSM 6324
/ JCM 9639 / NBRC 100938) GN=ths PE=3 SV=1
Length = 545
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 142/284 (50%), Gaps = 52/284 (18%)
Query: 180 KHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIE 239
+ F G +A NI A + A+TVRT GP GM+K++++ + + VTND TI+ E++IE
Sbjct: 19 QRFVG-RDAQRMNIMAARVVAETVRTTLGPMGMDKMLVDEMGDVVVTNDGVTILEEMDIE 77
Query: 240 HPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEE 299
HPAAK+++ ++ QE+
Sbjct: 78 --------------------------------------------HPAAKMVVEVAKTQED 93
Query: 300 EMGDGTNFVIIFAGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTLTCFEVKDVR 359
E+GDGT ++ AG LL A++LL+ + P+ I GY++A+ K E D
Sbjct: 94 EVGDGTTTAVVLAGELLHKAEDLLQQDIHPTVIARGYRMAVEKAE--EILEEIAEEIDPD 151
Query: 360 NVENVTKGIKSAIMSKQYGN-EDFLTDLITKAC--VSILPDGSSSFNVDNVRITKILGSG 416
+ E + K K+A+ K D+L +L+ KA V+ DG + D++++ K G G
Sbjct: 152 DEETLKKIAKTAMTGKGVEKARDYLAELVVKAVKQVAEEEDGEIVIDTDHIKLEKKEGGG 211
Query: 417 LFNSEIVQGMVF-KRSVEGDITKQTK-AKIAVYTCPVDIATTET 458
L ++E+V+GMV K V + ++ + AKIA+ CP+++ TET
Sbjct: 212 LEDTELVKGMVIDKERVHPGMPRRVENAKIALLNCPIEVKETET 255
Score = 76.3 bits (186), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 54/94 (57%)
Query: 605 AKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAK 664
AKIA+ CP+++ TET + I ++L F EE L E + IA+TGANVV
Sbjct: 239 AKIALLNCPIEVKETETDAEIRITDPEQLQAFIEEEERMLSEMVDKIAETGANVVFCQKG 298
Query: 665 FGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNA 698
D+A HYL K G++ VR K D+++L +A A
Sbjct: 299 IDDLAQHYLAKKGILAVRRVKKSDMQKLARATGA 332
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 77/183 (42%), Gaps = 54/183 (29%)
Query: 471 DSVAVDELGDTAVVVFKLEAAESRI----------ATLVIRGATENYMDDIERAVDDG-- 518
D ++ ++LG+ VV K A + I T++IRG TE+ +D+ ERA++D
Sbjct: 339 DDLSEEDLGEAEVVEEKKVAGDKMIFVEGCKDPKAVTILIRGGTEHVVDEAERAIEDAIG 398
Query: 519 ----------------------------------------VNTFKGITKVFVKTLAENTG 538
V F ++ +TLAEN+G
Sbjct: 399 VVAAALEDGKVVAGGGAPEVEVARQLRDFADGVEGREQLAVEAFADALEIIPRTLAENSG 458
Query: 539 VKSNEVISKLYSAHNEGKKTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAANT 598
+ +V+ +L + H +G+ T G D+ + V D E G+++ K AL AT AA
Sbjct: 459 LDPIDVLVQLRAKHEDGQVTAGIDVY--DGDVKDMLEEGVVEPLRVKTQALASATEAAEM 516
Query: 599 ILQ 601
IL+
Sbjct: 517 ILR 519
>sp|O26885|THSB_METTH Thermosome subunit beta OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=thsB PE=3 SV=1
Length = 538
Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 140/293 (47%), Gaps = 63/293 (21%)
Query: 170 LPAAIFQYYDKHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDA 229
LP +Y + +A NI A K A+TVRT GP GM+K++++ + + VTND
Sbjct: 11 LPEGTSRYLGR------DAQRMNILAGKILAETVRTTLGPKGMDKMLVDSLGDIVVTNDG 64
Query: 230 ATIIRELEIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKL 289
TI++E++IEHPAAK+++ ++ QE+E+GDGT +I AG LL A+NLL M HP
Sbjct: 65 VTILKEMDIEHPAAKMLVEVAKTQEDEVGDGTTTAVIIAGELLKKAENLLEMEIHPTI-- 122
Query: 290 IILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPT 349
I GY+ A K EIL
Sbjct: 123 ------------------------------------------IAMGYRQAAEKAQEILDD 140
Query: 350 LTCFEVKDVRNVENVTKGIKSAIMSKQYGNE---DFLTDLITKACVSILPDGSSSFNVDN 406
+ D + + + K +A+ K G E + L +LI A + DG D+
Sbjct: 141 IAI----DASDRDTLMKVAMTAMTGK--GTEKAREPLAELIVDAVKQVEEDG--EVEKDH 192
Query: 407 VRITKILGSGLFNSEIVQGMVF-KRSVEGDITKQTK-AKIAVYTCPVDIATTE 457
++I K G+ + +S +VQG++ K V + K+ + AKIA+ CP+++ TE
Sbjct: 193 IKIEKKEGAAVDDSTLVQGVIIDKERVHPGMPKKVENAKIALLNCPIEVKETE 245
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 51/94 (54%)
Query: 605 AKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAK 664
AKIA+ CP+++ TE + I ++ F EE + + + +I DTGANV+
Sbjct: 230 AKIALLNCPIEVKETEVDAEIRITDPSQMQAFIEQEEQMIRDMVNSIVDTGANVLFCQKG 289
Query: 665 FGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNA 698
D+A HYL K G++ VR K D+ +L KA A
Sbjct: 290 IDDLAQHYLAKAGVLAVRRVKKSDMEKLSKATGA 323
Score = 57.0 bits (136), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 79/179 (44%), Gaps = 57/179 (31%)
Query: 476 DELGDTAVV----------VFKLEAAESRIATLVIRGATENYMDDIERAVDDG------- 518
++LG+ VV +F E E + T+++RG+TE+ + ++ERA++D
Sbjct: 335 EDLGEAGVVSEKKISGEEMIFVEECKEPKAVTILVRGSTEHVVSEVERAIEDAIGVVAAT 394
Query: 519 -----------------------------------VNTFKGITKVFVKTLAENTGVKSNE 543
V+ F ++ KTLAEN G+ S +
Sbjct: 395 VEDGKVVAGGGAPEIEIAKRLKDYADSISGREQLAVSAFAEALEIVPKTLAENAGLDSID 454
Query: 544 VISKLYSAHNEGKKTY-GFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAANTILQ 601
V+ L +AH E TY G D+ + ++D EAG+++ + K A++ A AA IL+
Sbjct: 455 VLVDLRAAHEES--TYMGIDVF--DGKIVDMKEAGVIEPHRVKKQAIQSAAEAAEMILR 509
>sp|Q9V2S9|THSA_SULSO Thermosome subunit alpha OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=thsA PE=3 SV=2
Length = 559
Score = 119 bits (298), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 145/283 (51%), Gaps = 56/283 (19%)
Query: 187 EAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHPAAKLI 246
+A+ NI A K A+ +R++ GP G++K++I+ + +TND ATI++++EI+
Sbjct: 19 DALRNNILAAKTLAEMLRSSLGPKGLDKMLIDSFGDVTITNDGATIVKDMEIQ------- 71
Query: 247 ILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTN 306
HPAAKL++ ++ Q+ E+GDGT
Sbjct: 72 -------------------------------------HPAAKLLVEAAKAQDAEVGDGTT 94
Query: 307 FVIIFAGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTL-TCFEVKDVRN--VEN 363
++ AGALL A++LL + P+ I+ GYK A K LE+LP L T ++KD+ + +
Sbjct: 95 SAVVLAGALLEKAESLLDQNIHPTIIIEGYKKAYNKALELLPQLGTRIDIKDLNSSVARD 154
Query: 364 VTKGIKSAIMSKQYGNE----DFLTDLITKACVSI---LPDGSSSFNVDNVRITKILGSG 416
+ I ++ ++ E + + D++ A V++ LP+G + ++D ++I K G
Sbjct: 155 TLRKIAFTTLASKFIAEGAELNKIIDMVIDAIVNVAEPLPNGGYNVSLDLIKIDKKKGGS 214
Query: 417 LFNSEIVQGMVFKRSV--EGDITKQTKAKIAVYTCPVDIATTE 457
+ +S +V+G+V + V G + TKAKIAV +++ E
Sbjct: 215 IEDSVLVKGLVLDKEVVHPGMPRRVTKAKIAVLDAALEVEKPE 257
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
Query: 603 TKAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAG 662
TKAKIAV +++ E + I S +++ F E L++ + +A GANVV+
Sbjct: 240 TKAKIAVLDAALEVEKPEISAKISITSPEQIKAFLDEESKYLKDMVDKLASIGANVVICQ 299
Query: 663 AKFGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNATALPRLVST 707
D+A H+L K G++ VR + D+ +L KA+ A R++S+
Sbjct: 300 KGIDDIAQHFLAKKGILAVRRVKRSDIEKLEKALGA----RIISS 340
Score = 34.7 bits (78), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 82/218 (37%), Gaps = 52/218 (23%)
Query: 426 MVFKRSVEGDITKQTKAKIAVYTCPVDIATTETKTPPAASELGYADSVAVDELGDTAVVV 485
+ +R DI K KA A + AT E +LGYA+ V +G+ +V
Sbjct: 316 LAVRRVKRSDIEKLEKALGARIISSIKDATPE--------DLGYAELVEERRVGNDKMV- 366
Query: 486 FKLEAAESRIATLVIRGATENYMDDIERAVDDGVNTFKGI-------------------- 525
F A + +++RG+ + +D+ ER+++D ++ + I
Sbjct: 367 FIEGAKNLKAVNILLRGSNDMALDEAERSINDALHALRNILLEPVILPGGGAIELELAMK 426
Query: 526 ---------------TKVFVKT-------LAENTGVKSNEVISKLYSAHNEGKKTYGFDI 563
+ F LAE G+++ + L + H +G G D+
Sbjct: 427 LREYARSVGGKEQLAIEAFADALEEIPLILAETAGLEAISSLMDLRARHAKGLSNTGVDV 486
Query: 564 NGENSSVIDAAEAGILDLYLTKMWALKYATSAANTILQ 601
G V D I++ K LK AT AA IL+
Sbjct: 487 IG-GKIVDDVYALNIIEPIRVKSQVLKSATEAATAILK 523
>sp|P46219|THSA_SULSH Thermosome subunit alpha OS=Sulfolobus shibatae GN=thsA PE=1 SV=1
Length = 560
Score = 119 bits (298), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 145/283 (51%), Gaps = 56/283 (19%)
Query: 187 EAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHPAAKLI 246
+A+ NI A K A+ +R++ GP G++K++I+ + +TND ATI++++EI+
Sbjct: 19 DALRNNILAAKTLAEMLRSSLGPKGLDKMLIDSFGDVTITNDGATIVKDMEIQ------- 71
Query: 247 ILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTN 306
HPAAKL++ ++ Q+ E+GDGT
Sbjct: 72 -------------------------------------HPAAKLLVEAAKAQDAEVGDGTT 94
Query: 307 FVIIFAGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTL-TCFEVKDVRN--VEN 363
++ AGALL A++LL + P+ I+ GYK A K LE+LP L T +++D+ + +
Sbjct: 95 SAVVLAGALLEKAESLLDQNIHPTIIIEGYKKAYTKALELLPQLGTRIDIRDLNSSVARD 154
Query: 364 VTKGIKSAIMSKQYGNE----DFLTDLITKACVSI---LPDGSSSFNVDNVRITKILGSG 416
+ I ++ ++ E + + D++ A V++ LP+G + ++D ++I K G
Sbjct: 155 TLRKIAFTTLASKFIAEGAELNKIIDMVIDAIVNVAEPLPNGGYNVSLDLIKIDKKKGGS 214
Query: 417 LFNSEIVQGMVFKRSV--EGDITKQTKAKIAVYTCPVDIATTE 457
+ +S +V+G+V + V G + TKAKIAV +++ E
Sbjct: 215 IEDSVLVKGLVLDKEVVHPGMPRRVTKAKIAVLDAALEVEKPE 257
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
Query: 603 TKAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAG 662
TKAKIAV +++ E + I S +++ F E L++ + +A GANVV+
Sbjct: 240 TKAKIAVLDAALEVEKPEISAKISITSPEQIKAFLDEESKYLKDMVDKLASIGANVVICQ 299
Query: 663 AKFGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNATALPRLVST 707
D+A H+L K G++ VR + D+ +L KA+ A R++S+
Sbjct: 300 KGIDDIAQHFLAKKGILAVRRVKRSDIEKLEKALGA----RIISS 340
Score = 34.3 bits (77), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 84/218 (38%), Gaps = 52/218 (23%)
Query: 426 MVFKRSVEGDITKQTKAKIAVYTCPVDIATTETKTPPAASELGYADSVAVDELGDTAVVV 485
+ +R DI K KA A I++ + TP +LGYA+ V +G+ +V
Sbjct: 316 LAVRRVKRSDIEKLEKALGARI-----ISSIKDATP---DDLGYAELVEERRVGNDKMV- 366
Query: 486 FKLEAAESRIATLVIRGATENYMDDIERAVDDGVNTFKGI-------------------- 525
F A + +++RG+ + +D+ ER+++D ++ + I
Sbjct: 367 FIEGAKNLKAVNILLRGSNDMALDEAERSINDALHALRNILLEPVILPGGGAIELELAMK 426
Query: 526 ---------------TKVFVKT-------LAENTGVKSNEVISKLYSAHNEGKKTYGFDI 563
+ F LAE G+++ + L + H +G G D+
Sbjct: 427 LREYARSVGGKEQLAIEAFADALEEIPTILAETAGLEAISALMDLRARHAKGLTNTGVDV 486
Query: 564 NGENSSVIDAAEAGILDLYLTKMWALKYATSAANTILQ 601
G V D I++ K LK AT AA IL+
Sbjct: 487 IG-GKIVDDVYALNIIEPIRVKAQVLKSATEAATAILK 523
>sp|Q58405|THS_METJA Thermosome subunit OS=Methanocaldococcus jannaschii (strain ATCC
43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=ths PE=3 SV=1
Length = 542
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 148/293 (50%), Gaps = 54/293 (18%)
Query: 171 PAAIFQYYDKHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAA 230
P + K + G +A NI A + A+TVRT GP GM+K++++ + + VTND
Sbjct: 7 PIVVLPQNVKRYVG-RDAQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDIVVTNDGV 65
Query: 231 TIIRELEIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLI 290
TI++E+ +E HPAAK++
Sbjct: 66 TILKEMSVE--------------------------------------------HPAAKML 81
Query: 291 ILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTL 350
I ++ QE+E+GDGT ++ AG LL A+ LL + PS I+NGY++A K +E L ++
Sbjct: 82 IEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHPSVIINGYEMARNKAVEELKSI 141
Query: 351 TCFEVKDVRNVENVTKGIKSAIMSKQYGNE---DFLTDLITKACVSILPDGSSSFNVDNV 407
EVK + E + K ++I K G E + L +++ +A +++ + + + D +
Sbjct: 142 -AKEVKP-EDTEMLKKIAMTSITGK--GAEKAREQLAEIVVEAVRAVVDEETGKVDKDLI 197
Query: 408 RITKILGSGLFNSEIVQGMVF-KRSVEGDITKQTK-AKIAVYTCPVDIATTET 458
++ K G+ + +++++G+V K V + K+ + AKIA+ CP+++ TET
Sbjct: 198 KVEKKEGAPIEETKLIRGVVIDKERVNPQMPKKVENAKIALLNCPIEVKETET 250
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 58/100 (58%)
Query: 605 AKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAK 664
AKIA+ CP+++ TET + I +LM+F EE +++ ++ IA TGANVV
Sbjct: 234 AKIALLNCPIEVKETETDAEIRITDPAKLMEFIEQEEKMIKDMVEKIAATGANVVFCQKG 293
Query: 665 FGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNATALPRL 704
D+A HYL K G++ VR K D+ +L KA A + ++
Sbjct: 294 IDDLAQHYLAKKGILAVRRVKKSDMEKLAKATGARIVTKI 333
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 93/220 (42%), Gaps = 56/220 (25%)
Query: 426 MVFKRSVEGDITKQTKAKIAVYTCPVDIATTETKTPPAASELGYADSVAVDELGDTAVVV 485
+ +R + D+ K KA A +D TP E G + V GD ++
Sbjct: 308 LAVRRVKKSDMEKLAKATGARIVTKID-----DLTPEDLGEAGLVEERKV--AGDA--MI 358
Query: 486 FKLEAAESRIATLVIRGATENYMDDIERAVDDGVNTFK------------GITK------ 527
F + + T++ RG+TE+ ++++ RA+DD + K G T+
Sbjct: 359 FVEQCKHPKAVTILARGSTEHVVEEVARAIDDAIGVVKCALEEGKIVAGGGATEIELAKR 418
Query: 528 ------------------------VFVKTLAENTGVKSNEVISKLYSAH-NEGKKTYGFD 562
V +TLAEN+G+ +++ KL +AH EG + YG D
Sbjct: 419 LRKFAESVAGREQLAVKAFADALEVIPRTLAENSGLDPIDMLVKLRAAHEKEGGEVYGLD 478
Query: 563 I-NGENSSVIDAAEAGILDLYLTKMWALKYATSAANTILQ 601
+ GE V+D E G+++ K A+ AT A+ +L+
Sbjct: 479 VFEGE---VVDMLEKGVVEPLKVKTQAIDSATEASVMLLR 515
>sp|Q9V2T5|THSA_SULAC Thermosome subunit alpha OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=thsA PE=3 SV=2
Length = 558
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 145/300 (48%), Gaps = 58/300 (19%)
Query: 171 PAAIFQYYDKHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAA 230
P +F+ SG +A+ NI A A+ ++++ GP G++K++I+ + +TND A
Sbjct: 4 PVLLFKEGTSRSSG-RDALRNNILAAVTLAEMLKSSLGPRGLDKMLIDSFGDVTITNDGA 62
Query: 231 TIIRELEIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLI 290
TI++E+EI+ HPAAKL+
Sbjct: 63 TIVKEMEIQ--------------------------------------------HPAAKLL 78
Query: 291 ILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTL 350
+ ++ Q+ E+GDGT ++ AG LL A+ LL + P+ I++GYK AL K LEI+ L
Sbjct: 79 VEAAKAQDAEVGDGTTSAVVLAGLLLDKAEELLEQNVHPTIIIDGYKKALTKALEIIDQL 138
Query: 351 TC-FEVKDVRN--VENVTKGIKSAIMSKQY---GNE--DFLTDLITKACVSIL---PDGS 399
+ +V D+ + + K I S MS ++ G E D + DL+ A + PDG+
Sbjct: 139 SLKIDVNDLSSPTAKAQLKKIVSTTMSSKFIAGGAEEIDKIIDLVIDAITIVAEKRPDGT 198
Query: 400 SSFNVDNVRITKILGSGLFNSEIVQGMVFKRSV--EGDITKQTKAKIAVYTCPVDIATTE 457
+ +D ++I K G + +S +V G+V + V G + KAKIAV +++ E
Sbjct: 199 YNVPLDLIKIDKKKGGSIEDSILVHGLVLDKEVVHAGMPRRVEKAKIAVLDAALEVEKPE 258
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 604 KAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGA 663
KAKIAV +++ E + I S +++ F E L+E + +A GANVV+
Sbjct: 242 KAKIAVLDAALEVEKPEISAKISITSPEQIKSFLDEEARYLKEMVDKLASIGANVVICQK 301
Query: 664 KFGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNATALPRLVST 707
D+A H+L K G++ VR + D+ +L KA+ A R++S+
Sbjct: 302 GIDDVAQHFLAKKGILAVRRVKRSDIEKLEKALGA----RIISS 341
Score = 34.7 bits (78), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 87/219 (39%), Gaps = 54/219 (24%)
Query: 426 MVFKRSVEGDITKQTKAKIAVYTCPVDIATTETKTPPAASELGYADSVAVDELGDTAVVV 485
+ +R DI K KA A + AT E +LGYA+ V +G+ +V
Sbjct: 317 LAVRRVKRSDIEKLEKALGARIISSIKDATPE--------DLGYAELVEERRIGNDKMV- 367
Query: 486 FKLEAAESRIATLVIRGATENYMDDIERAVDDGVNTFKGI-------------------- 525
F A R +++RG+ + +D+ ER+++D +++ + +
Sbjct: 368 FIEGAKNPRAVNILLRGSNDMALDEAERSLNDALHSLRNVLMKPMIVAGGGAVESELALR 427
Query: 526 TKVFVKT----------------------LAENTGVKSNEVISKLYSAHNEGKKTYGFD- 562
+ + ++ LAE G++ + + L + H +G G D
Sbjct: 428 LREYARSVGGKEQLAIEKFAEALEEIPMILAETAGMEPIQALMDLRARHAKGLVNSGIDA 487
Query: 563 INGENSSVIDAAEAGILDLYLTKMWALKYATSAANTILQ 601
+NG+ + D + +++ K LK A AA IL+
Sbjct: 488 VNGKIAD--DMMKINVIEPVRVKSQVLKSAVEAATAILK 524
>sp|O26320|THSA_METTH Thermosome subunit alpha OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=thsA PE=3 SV=2
Length = 542
Score = 113 bits (283), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 137/277 (49%), Gaps = 57/277 (20%)
Query: 187 EAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHPAAKLI 246
EA NI A K A+TVRT GP GM+K++++ + + +TND TI+RE++I
Sbjct: 22 EAQRINILAGKVLAETVRTTLGPKGMDKMLVDSLGDIVITNDGVTILREMDIS------- 74
Query: 247 ILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTN 306
HPAAK+++ ++ QE+E+GDGT
Sbjct: 75 -------------------------------------HPAAKMLVEVAKTQEDEVGDGTT 97
Query: 307 FVIIFAGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTLTCFEVKDVRNVENVTK 366
+I AG LL A+ L+ MG+ P+ I GY+ A K EIL ++ + + + + K
Sbjct: 98 TAVIIAGELLKEAEKLIEMGVHPTIIALGYRNAALKAQEILEEISM----EASDRDTLMK 153
Query: 367 GIKSAIMSKQYGNE---DFLTDLITKACVSILPDGSSSFNVDNVRITKILGSGLFNSEIV 423
+A+ K G+E + L +L+ A + + DG + DN+ I +I G+ + S IV
Sbjct: 154 VAITAMTGK--GSERAKEKLAELVVDAVMQVEEDG--EIDKDNINIQRIQGASVNESRIV 209
Query: 424 QGMVFKRS-VEGDITKQT-KAKIAVYTCPVDIATTET 458
G+V +S + + K+ KA+IA+ P+++ ET
Sbjct: 210 NGIVIDKSRADTSMPKRIEKARIALLKYPIEVKDLET 246
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 604 KAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGA 663
KA+IA+ P+++ ET + + ++ F EE + + ++ I +GANVV
Sbjct: 229 KARIALLKYPIEVKDLETDAKIRLTDPSQMQAFIEQEEQMIRDMVEKIKSSGANVVFCQK 288
Query: 664 KFGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNATALPRLVS 706
D+ALHYL++ G+M ++ K D++R+ KA A RLV+
Sbjct: 289 GIDDLALHYLSREGIMALKRVKKSDIKRIEKATGA----RLVT 327
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 54/218 (24%)
Query: 426 MVFKRSVEGDITKQTKAKIAVYTCPVDIATTETKTPPAASELGYADSVAVDELGDTAVVV 485
M KR + DI + KA A +D T E +LG A + ++ D V+
Sbjct: 304 MALKRVKKSDIKRIEKATGARLVTNIDDLTAE--------DLGEAGVIYEKKIFDE-VLT 354
Query: 486 FKLEAAESRIATLVIRGATENYMDDIERAVDDG--------------------------- 518
F E + + ++++RG+T++ +++ERA++D
Sbjct: 355 FIEECRDPKAISIILRGSTKHVAEEMERALEDAIGVVASTLEDREVVAGGGAPEVEIARK 414
Query: 519 ---------------VNTFKGITKVFVKTLAENTGVKSNEVISKLYSAHNEGKKTYGFDI 563
V+ F ++ KTLAEN G+ S +V+ L +AH E G D+
Sbjct: 415 LREYADTISGREQLAVSAFADALEIVPKTLAENAGLDSIDVLVDLRAAHEES-PYMGIDV 473
Query: 564 NGENSSVIDAAEAGILDLYLTKMWALKYATSAANTILQ 601
+ +++D EAG+++ K A++ A AA IL+
Sbjct: 474 F--DGNIVDMKEAGVIEPQRVKKQAIQSAAEAAEMILR 509
>sp|O93624|THS_METTL Thermosome subunit OS=Methanococcus thermolithotrophicus GN=ths
PE=1 SV=1
Length = 544
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 143/291 (49%), Gaps = 51/291 (17%)
Query: 171 PAAIFQYYDKHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAA 230
P + K F G +A NI A + +TVR+ GP GM+K++++ + + VTND
Sbjct: 6 PVVVLPENVKRFMG-RDAQRMNILAGRIIGETVRSTLGPKGMDKMLVDDLGDIVVTNDGV 64
Query: 231 TIIRELEIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLI 290
TI++E+ +EHPAAK++I ++ QE+E+GDGT ++ AG LL A+ LL HP
Sbjct: 65 TILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNVHPTI--- 121
Query: 291 ILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTL 350
++ GY+LA+ K E+L +
Sbjct: 122 -----------------------------------------VIKGYQLAVQKAQEVLKEI 140
Query: 351 TCFEVKDVRNVENVTKGIKSAIMSKQYGN-EDFLTDLITKACVSILPDGSSSFNVDNVRI 409
+VK + E + K ++I K ++ L ++I +A +++ D S + D ++I
Sbjct: 141 -AMDVK-ADDKEILHKIAMTSITGKGAEKAKEKLGEMIVEAVTAVV-DESGKVDKDLIKI 197
Query: 410 TKILGSGLFNSEIVQGMVF-KRSVEGDITKQTK-AKIAVYTCPVDIATTET 458
K G+ + +E++ G++ K V + K+ + AKIA+ CP+++ TET
Sbjct: 198 EKKEGASVDETELINGVLIDKERVSPQMPKKIENAKIALLNCPIEVKETET 248
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 53/94 (56%)
Query: 605 AKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAK 664
AKIA+ CP+++ TET + I +LM+F EE L++ + I +GANV+
Sbjct: 232 AKIALLNCPIEVKETETDAEIRITDPTKLMEFIEQEEKMLKDMVDTIKASGANVLFCQKG 291
Query: 665 FGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNA 698
D+A HYL K G++ VR K D+ +L KA A
Sbjct: 292 IDDLAQHYLAKEGILAVRRVKKSDMEKLSKATGA 325
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 44/180 (24%)
Query: 464 ASELGYADSVAVDELGDTAVVVFKLEAAESRIATLVIRGATENYMDDIERAVDDG----- 518
A +LG A V ++ A++ F E + T++IRG TE+ ++++ RAVDD
Sbjct: 336 AEDLGEAGIVEERKIAGDAMI-FVEECKHPKAVTMLIRGTTEHVIEEVARAVDDAIGVVA 394
Query: 519 -------------------------------------VNTFKGITKVFVKTLAENTGVKS 541
V F +V +TLAEN G+ +
Sbjct: 395 CTIEDGKIVAGGGAAEIELAMKLRDYAEGVSGREQLAVRAFADALEVVPRTLAENAGLDA 454
Query: 542 NEVISKLYSAHNEGKKTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAANTILQ 601
E++ KL + H EG Y + +N V + E G+++ K A++ AT A +L+
Sbjct: 455 IEMLVKLRAKHAEGNNAY-YGLNVFTGDVENMTENGVVEPLRVKTQAIQSATEATEMLLR 513
>sp|Q9V2Q7|THS_PYRAB Thermosome subunit OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=ths
PE=3 SV=1
Length = 550
Score = 110 bits (275), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 135/274 (49%), Gaps = 55/274 (20%)
Query: 192 NISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHPAAKLIILGSQ 251
NI A + A+TVRT GP GM+K++++ + + +TND ATI+ E++I+HPAAK+++ ++
Sbjct: 28 NILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITNDGATILDEMDIQHPAAKMMVEVAK 87
Query: 252 MQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTNFVIIF 311
Q++E GDGT ++ AG LL A+ LL H
Sbjct: 88 TQDKEAGDGTTTAVVIAGELLKKAEELLDQNIH--------------------------- 120
Query: 312 AGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTLTCFEVKDVR--NVENVTKGIK 369
PS ++ GY LA K EIL ++ K+V+ + E + K
Sbjct: 121 -----------------PSIVIKGYMLAAEKAQEILDSIA----KEVKPDDEEVLLKAAM 159
Query: 370 SAIMSKQYGNE-DFLTDLITKAC--VSILPDGSSSFNVDNVRITKILGSGLFNSEIVQGM 426
+AI K E ++L L +A V+ DG ++DN++ K G + ++++++G+
Sbjct: 160 TAITGKAAEEEREYLAKLAVEAVKLVAEEKDGKFKVDIDNIKFEKKEGGAVSDTKLIRGV 219
Query: 427 VFKRSV--EGDITKQTKAKIAVYTCPVDIATTET 458
V + V G + KAKIA+ +++ TET
Sbjct: 220 VIDKEVVHPGMPKRVEKAKIALINDALEVKETET 253
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%)
Query: 604 KAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGA 663
KAKIA+ +++ TET + I S ++L F EE L+E + I + GANVV
Sbjct: 236 KAKIALINDALEVKETETDAEIRITSPEQLQAFLEQEEKMLKEMVDKIKEVGANVVFVQK 295
Query: 664 KFGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNA 698
D+A HYL KYG++ VR K D+ +L KA A
Sbjct: 296 GIDDLAQHYLAKYGILAVRRVKKSDMEKLAKATGA 330
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 64/148 (43%), Gaps = 46/148 (31%)
Query: 497 TLVIRGATENYMDDIERAVDDGVNTFKGIT------------------------------ 526
T++IRG TE+ +D++ERA++D V K I
Sbjct: 373 TILIRGGTEHVVDEVERALEDAVKVVKDILEDGKIIAGGGAAEIELSIKLDEYAKEVGGK 432
Query: 527 ------------KVFVKTLAENTGVKSNEVISKLYSAHNEGKKTYGFDI-NGENSSVIDA 573
KV +TLAEN G+ E + K+ +AH E T G D+ GE + D
Sbjct: 433 EQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAHKEKGPTIGIDVYEGEPA---DM 489
Query: 574 AEAGILDLYLTKMWALKYATSAANTILQ 601
E G+++ K A+K A+ AA IL+
Sbjct: 490 MERGVIEPVRVKKQAIKSASEAAIMILR 517
>sp|P48424|THSA_THEAC Thermosome subunit alpha OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=thsA PE=1 SV=1
Length = 545
Score = 110 bits (275), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 132/277 (47%), Gaps = 57/277 (20%)
Query: 188 AVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHPAAKLII 247
A NI A K AD VRT GP GM+K++++ I + ++ND ATI++E+++E
Sbjct: 23 AQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATILKEMDVE-------- 74
Query: 248 LGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTNF 307
HP AK+I+ S+ Q+ +GDGT
Sbjct: 75 ------------------------------------HPTAKMIVEVSKAQDTAVGDGTTT 98
Query: 308 VIIFAGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTLTCFEVKDVRNVENVTKG 367
++ +G LL A+ LL G+ P+ I NGY+LA+ + +I+ + D + K
Sbjct: 99 AVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAEKSTDDA----TLRKI 154
Query: 368 IKSAIMSKQYG-NEDFLTDLITKA--CVSILPDGSSSFNVDNVRITKILGSGLFNSEIVQ 424
+A+ K G + DFL DL+ KA V+ + DG + + N+++ K G + +++ +
Sbjct: 155 ALTALSGKNTGLSNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVNDTQFIS 214
Query: 425 GMVFKR----SVEGDITKQTKAKIAVYTCPVDIATTE 457
G+V + S D+ K AKIA+ ++I TE
Sbjct: 215 GIVIDKEKVHSKMPDVVKN--AKIALIDSALEIKKTE 249
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%)
Query: 605 AKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAK 664
AKIA+ ++I TE + V I ++ F E N ++ ++ I +GANVV+
Sbjct: 234 AKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKG 293
Query: 665 FGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNA 698
D+A HYL K G+ VR K D+ +L KA A
Sbjct: 294 IDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGA 327
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 75/179 (41%), Gaps = 45/179 (25%)
Query: 465 SELGYADSVAVDELGDTAVVVFKLEAAESRIATLVIRGATENYMDDIERAVDDGV----- 519
S LG A++V ++GD + F + + +++IRG T++ + ++ERA++D +
Sbjct: 339 SVLGEAETVEERKIGDDRMT-FVMGCKNPKAVSILIRGGTDHVVSEVERALNDAIRVVAI 397
Query: 520 -------------------------------------NTFKGITKVFVKTLAENTGVKSN 542
F ++ +TLAEN G+
Sbjct: 398 TKEDGKFLWGGGAVEAELAMRLAKYANSVGGREQLAIEAFAKALEIIPRTLAENAGIDPI 457
Query: 543 EVISKLYSAHNEGKKTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAANTILQ 601
+ KL + H +G+ + G D++ N+ V D G++D K AL+ A A IL+
Sbjct: 458 NTLIKLKAEHEKGRISVGVDLD--NNGVGDMKAKGVVDPLRVKTHALESAVEVATMILR 514
>sp|Q9V2T3|THSB_DESMO Thermosome subunit beta (Fragment) OS=Desulfurococcus mobilis
GN=thsB PE=3 SV=1
Length = 502
Score = 110 bits (274), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 138/276 (50%), Gaps = 51/276 (18%)
Query: 187 EAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHPAAKLI 246
+A+ NI A + ++ ++T YGP GM+K++++ + + +TND ATI+ + EI+
Sbjct: 7 DALRTNILAARAISEMIKTTYGPKGMDKMLVDALGDVTITNDGATILDKAEIQ------- 59
Query: 247 ILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTN 306
HPAAK+++ ++ Q+ E+GDGT
Sbjct: 60 -------------------------------------HPAAKMLVQVAKSQDSEVGDGTK 82
Query: 307 FVIIFAGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTLTCFEVKDVRNVENVTK 366
+I AG LL A+ LL + P+ I++GY++A+ + L+IL + E D+ N E + K
Sbjct: 83 RAVILAGELLKYAEELLDKNIHPTVIISGYRMAMEEALKILDQMA--EPIDLNNEELLRK 140
Query: 367 GIKSAIMSKQ-YGNEDFLTDLITKACVSILPD-GSSSF-NVDNVRITKILGSGLFNSEIV 423
++++ SK + +F D+ KA ++ G ++ ++DN++I K G L +S +V
Sbjct: 141 VARTSLTSKAVHDAREFFADIAVKAVKQVVEKRGDKNYVDLDNIQIIKKYGGALLDSMLV 200
Query: 424 QGMVFKRSV--EGDITKQTKAKIAVYTCPVDIATTE 457
G+V + V G + AKI + P++I E
Sbjct: 201 YGIVLDKEVVHPGMPRRVENAKIVLLDAPLEIEKPE 236
Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 605 AKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAK 664
AKI + P++I E + I ++L KF + EE L + + IA GANVVV
Sbjct: 221 AKIVLLDAPLEIEKPEIDAEIRINDPEQLEKFLQQEEEILMKMVDKIASVGANVVVCQKG 280
Query: 665 FGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNATALPRLVS 706
++A H+L K G++ VR + DL +L +A R+VS
Sbjct: 281 IDEVAQHFLAKKGILAVRRVKRSDLEKLERATGG----RIVS 318
Score = 35.4 bits (80), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 76/191 (39%), Gaps = 47/191 (24%)
Query: 453 IATTETKTPPAASELGYADSVAVDELGDTAVVVFKLEAAESRIATLVIRGATENYMDDIE 512
++ E TP +LGYA V ++G+ +V F R ++VIRG E +D+ E
Sbjct: 317 VSNIEDLTP---EDLGYAALVEERKVGEDKMV-FIEGCKNPRSVSIVIRGGLERLVDEAE 372
Query: 513 RAVDDGVNTF---------------------KGITKV--------------FVK------ 531
R++ D ++ K I ++ F K
Sbjct: 373 RSIRDALSAVADALRDGKVIPGGGAAEIELAKHIRRLATRVGGKEQLAIEAFAKALEGLA 432
Query: 532 -TLAENTGVKSNEVISKLYSAHNEGKKTYGFDINGENSSVIDAAEAGILDLYLTKMWALK 590
TL EN G+ +++ KL +AH Y I+ +++ E G+++ A+K
Sbjct: 433 VTLVENAGLDPIDMVMKLRAAHEREDGKY-LSIDLATGDLVNMREKGVIEPVSILANAIK 491
Query: 591 YATSAANTILQ 601
T AA I++
Sbjct: 492 AGTEAATIIMR 502
>sp|O30561|THS1_HALVD Thermosome subunit 1 OS=Haloferax volcanii (strain ATCC 29605 / DSM
3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 /
DS2) GN=cct1 PE=1 SV=1
Length = 560
Score = 109 bits (273), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 126/261 (48%), Gaps = 50/261 (19%)
Query: 171 PAAIFQYYDKHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAA 230
P I + SG ++A NI+A K A+ VRT GP GM+K++++ ++ VTND
Sbjct: 10 PMIILGEDSQRTSG-QDAQSMNITAGKAVAEAVRTTLGPKGMDKMLVDSGGQVVVTNDGV 68
Query: 231 TIIRELEIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLI 290
TI++E++I+HPAA +I+ S+ QE+E+GDGT +I AG LL A++LL H
Sbjct: 69 TILKEMDIDHPAANMIVEVSETQEDEVGDGTTTAVINAGELLDQAEDLLDSDVH------ 122
Query: 291 ILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTL 350
+ I GY+ A K E+L
Sbjct: 123 --------------------------------------ATTIAQGYRQAAEKAKEVLEDN 144
Query: 351 TCFEVKDVRNVENVTKGIKSAIMSK-QYGNEDFLTDLITKACVSILPDGSSSFNVDNVRI 409
+D R E +TK +A+ K +D L++L+ A +++ D + +NV I
Sbjct: 145 AIEVTEDDR--ETLTKIAATAMTGKGAESAKDLLSELVVDAVLAVKDD--DGIDTNNVSI 200
Query: 410 TKILGSGLFNSEIVQGMVFKR 430
K++G + NSE+V+G++ +
Sbjct: 201 EKVVGGTIDNSELVEGVIVDK 221
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 605 AKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAK 664
A IA+ +++ TE V + D+L +F EE QL+E + + + GA+ V G
Sbjct: 235 ANIAILDDALEVRETEIDAEVNVTDPDQLQQFLDQEEKQLKEMVDQLVEVGADAVFVGDG 294
Query: 665 FGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNATALPRLVSTY 708
DMA HYL K G++ VR DL+RL +A R+VS+
Sbjct: 295 IDDMAQHYLAKEGILAVRRAKSSDLKRLARATGG----RVVSSL 334
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 80/182 (43%), Gaps = 49/182 (26%)
Query: 464 ASELGYADSVAVDELG-DTAVVVFKLEAAESRIATLVIRGATENYMDDIERAVDD----- 517
A +LG+A SV ++G D + V +E A+S TL++RG TE+ +D++ERA++D
Sbjct: 339 ADDLGFAGSVGQKDVGGDERIFVEDVEDAKS--VTLILRGGTEHVVDELERAIEDSLGVV 396
Query: 518 -------------------------------------GVNTFKGITKVFVKTLAENTGVK 540
V F + +TLAEN G+
Sbjct: 397 RTTLEDGKVLPGGGAPETELSLQLREFADSVGGREQLAVEAFAEALDIIPRTLAENAGLD 456
Query: 541 SNEVISKLYSAHNEGKKTYGFDI-NGENSSVIDAAEAGILDLYLTKMWALKYATSAANTI 599
+ + L S H+ G+ G D GE VID E G+++ K A++ AT AA I
Sbjct: 457 PIDSLVDLRSRHDGGEFAAGLDAYTGE---VIDMEEEGVVEPLRVKTQAIESATEAAVMI 513
Query: 600 LQ 601
L+
Sbjct: 514 LR 515
>sp|O28045|THSA_ARCFU Thermosome subunit alpha OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=thsA PE=3 SV=1
Length = 545
Score = 109 bits (272), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 134/273 (49%), Gaps = 53/273 (19%)
Query: 192 NISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHPAAKLIILGSQ 251
NI A + A+ V++ GP GM+K++++ + + +TND TI++E+++EHPAAK+II ++
Sbjct: 28 NIMAARVIAEAVKSTLGPKGMDKMLVDSLGDVVITNDGVTILKEMDVEHPAAKMIIEVAK 87
Query: 252 MQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTNFVIIF 311
Q+ E+GDGT ++ AG LL A+ LL HP
Sbjct: 88 TQDNEVGDGTTTAVVLAGELLKKAEELLDQDIHPTV------------------------ 123
Query: 312 AGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTLTCFEVKDVRNVENVTKGIKSA 371
I GY++A K +EIL ++ ++ DV + E + K +A
Sbjct: 124 --------------------IARGYRMAANKAVEILESI-AMDI-DVEDEETLKKIAATA 161
Query: 372 IMSK--QYGNEDFLTDLITKACVSILPDGSSSFNV--DNVRITKILGSGLFNSEIVQGMV 427
I K +Y D L+ L+ +A + + V DN+++ K G + ++++V G+V
Sbjct: 162 ITGKHSEYAL-DHLSSLVVEAVKRVAEKVDDRYKVDEDNIKLEKRQGGSVADTKLVNGIV 220
Query: 428 F-KRSVEGDITKQTK-AKIAVYTCPVDIATTET 458
K V + K+ K AKIAV +++ TET
Sbjct: 221 IDKEVVHPGMPKRVKNAKIAVLKAALEVKETET 253
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 55/100 (55%)
Query: 605 AKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAK 664
AKIAV +++ TET + I D+LMKF EE L+E + +A+ GANVV
Sbjct: 237 AKIAVLKAALEVKETETDAEIRITDPDQLMKFIEQEEKMLKEMVDRLAEAGANVVFCQKG 296
Query: 665 FGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNATALPRL 704
D+A +YL K G++ VR + D+ ++ KA A + L
Sbjct: 297 IDDLAQYYLAKAGILAVRRVKQSDIEKIAKACGAKIITDL 336
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 92/219 (42%), Gaps = 55/219 (25%)
Query: 426 MVFKRSVEGDITKQTKAKIAVYTCPVDIATTETKTPPAASELGYADSVAVDELGDTAVVV 485
+ +R + DI K KA C I T + A +LG A+ V ++GD +V
Sbjct: 311 LAVRRVKQSDIEKIAKA------CGAKIITDLREITSA--DLGEAELVEERKVGDEKMV- 361
Query: 486 FKLEAAESRIATLVIRGATENYMDDIERAVDDGVNT------------------------ 521
F + T++IRG +E+ +D++ER++ D +
Sbjct: 362 FIEGCKNPKAVTILIRGGSEHVVDEVERSLQDAIKVVKTALESGKVVAGGGAPEIEVALK 421
Query: 522 ------------------FKGITKVFVKTLAENTGVKSNEVISKLYSAHNEGKKTYGFDI 563
F +V + LAEN+G+ +++ +L AH EGK TYG D+
Sbjct: 422 IRDWAPTLGGREQLAAEAFASALEVIPRALAENSGLDPIDILVELRKAHEEGKTTYGVDV 481
Query: 564 -NGENSSVIDAAEAGILDLYLTKMWALKYATSAANTILQ 601
+GE + + E G+L+ K A+ AT A IL+
Sbjct: 482 FSGEVACM---KERGVLEPLKVKTQAITSATEVAIMILR 517
>sp|Q9YA66|THSB_AERPE Thermosome subunit beta OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=thsB PE=3
SV=2
Length = 548
Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 142/300 (47%), Gaps = 52/300 (17%)
Query: 163 PSPRRTTLPAAIFQYYDKHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDK 222
P +P I + + G EA+ NI A + A ++T YGP GM+K++++ +
Sbjct: 7 PMTEPVGIPVIILKEGTQRSYG-REALRANIMAVRAIAQILKTTYGPKGMDKMLVDSLGD 65
Query: 223 LFVTNDAATIIRELEIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMI 282
+ +TN+ ATI+ ++++ HPAAK+++ S+ QE+E GDGT +IFAG LL A+ LL +
Sbjct: 66 ITITNNGATILDKMDVAHPAAKMLVQISKGQEDEAGDGTKTTVIFAGELLKEAEKLLDIN 125
Query: 283 EHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTPSEIVNGYKLALAK 342
HP IV GYK AL K
Sbjct: 126 IHPTI--------------------------------------------IVEGYKEALRK 141
Query: 343 TLEILPTLTCFEVKDVRNVENVTKGIKSAIMSKQYGN-EDFLTDLITKACVSILPDGSSS 401
E++ ++ E +VE + K+++ SK D+ +L +A ++
Sbjct: 142 ASEVIESIA--EPVSYDDVEKLKLIAKTSLNSKAVAEARDYFAELAVEAVRTVAERRGDR 199
Query: 402 FNVD--NVRITKILGSGLFNSEIVQGMVF-KRSVEGDITKQTK-AKIAVYTCPVDIATTE 457
+ VD N++I K G L ++ +V+G+V K V D+ ++ + A+IA+ P++I E
Sbjct: 200 WYVDLNNIQIVKKHGGSLRDTRLVRGIVLDKEVVHPDMPRRVENARIALLDTPLEIEKPE 259
Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%)
Query: 605 AKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAK 664
A+IA+ P++I E + I S +++ +E L+E+I+ IA TGANVV+
Sbjct: 244 ARIALLDTPLEIEKPEIDLEISITSPEQIKALYEKQERILQEKIEKIAATGANVVITQKG 303
Query: 665 FGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNA 698
D+A H+L K G++ VR + D+ ++ +A A
Sbjct: 304 IDDVAQHFLAKKGILAVRRVKRSDIEKIARATGA 337
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 74/180 (41%), Gaps = 46/180 (25%)
Query: 465 SELGYADSVAVDELGDTAVVVFKLEAAESRIATLVIRGATENYMDDIERAVDDG------ 518
+LGYA+ V ++G+ +V F A + T+++RG E +D+ ER++ D
Sbjct: 349 EDLGYAELVEERKVGEDKMV-FIEGAKNPKSVTILLRGGFERLVDEAERSLHDALSVVAD 407
Query: 519 ------------------------------------VNTFKGITKVFVKTLAENTGVKSN 542
V F + + LA N G
Sbjct: 408 AIMDGKIVAGGGAVEAEVAKVLYEYASKLPGKTQLAVEAFARAVEALPQALAHNAGHDPI 467
Query: 543 EVISKLYSAHNEGK-KTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAANTILQ 601
EV+ KL SAH + + K YG D++ ++D G+L+ K+ ALK AT A+ IL+
Sbjct: 468 EVLVKLRSAHEKPENKWYGVDLD--TGEIVDMWSRGVLEPMRVKLNALKAATEVASLILR 525
>sp|O57762|THS_PYRHO Thermosome subunit OS=Pyrococcus horikoshii (strain ATCC 700860 /
DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=ths PE=3
SV=1
Length = 549
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 134/274 (48%), Gaps = 55/274 (20%)
Query: 192 NISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHPAAKLIILGSQ 251
NI A + A+TVRT GP GM+K++++ + + +TND ATI+ E++I+HPAAK+++ ++
Sbjct: 28 NILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITNDGATILDEMDIQHPAAKMMVEVAK 87
Query: 252 MQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTNFVIIF 311
Q++E GDGT ++ AG LL A+ LL HP
Sbjct: 88 TQDKEAGDGTTTAVVIAGELLKKAEELLDQNIHP-------------------------- 121
Query: 312 AGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTLTCFEVKDVR--NVENVTKGIK 369
S I+ GY LA K EIL ++ K+V+ + E + K
Sbjct: 122 ------------------SIIIKGYTLASQKAQEILDSIA----KEVKPDDEEVLLKAAM 159
Query: 370 SAIMSKQYGNE-DFLTDLITKAC--VSILPDGSSSFNVDNVRITKILGSGLFNSEIVQGM 426
+AI K E ++L L +A V+ DG ++DN+++ K G + ++ +++G+
Sbjct: 160 TAITGKAAEEEREYLAKLAVEAVKLVAEEKDGKLKVDIDNIKLEKKEGGAVRDTRLIRGV 219
Query: 427 VFKRSV--EGDITKQTKAKIAVYTCPVDIATTET 458
V + V G + AKIA+ +++ TET
Sbjct: 220 VIDKEVVHPGMPKRIENAKIALINDALEVKETET 253
Score = 70.1 bits (170), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 52/94 (55%)
Query: 605 AKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAK 664
AKIA+ +++ TET + I S ++L F EE L+E + I + GANVV
Sbjct: 237 AKIALINDALEVKETETDAEIRITSPEQLQAFLEQEEKMLKEMVDKIKEVGANVVFVQKG 296
Query: 665 FGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNA 698
D+A HYL KYG++ VR K D+ +L KA A
Sbjct: 297 IDDLAQHYLAKYGILAVRRVKKSDMEKLAKATGA 330
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 65/148 (43%), Gaps = 46/148 (31%)
Query: 497 TLVIRGATENYMDDIERAVDDGVNTFKGIT------------------------------ 526
T++IRG TE+ +D++ERA++D + K I
Sbjct: 373 TILIRGGTEHVVDEVERALEDAIKVVKDILEDGKIIAGGGASEIELSIKLDEYAKEVGGK 432
Query: 527 ------------KVFVKTLAENTGVKSNEVISKLYSAHNEGKKTYGFDI-NGENSSVIDA 573
KV +TLAEN G+ E + K+ +AH E +T G D+ GE + D
Sbjct: 433 EQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAHKEKGQTIGIDVYEGEPA---DM 489
Query: 574 AEAGILDLYLTKMWALKYATSAANTILQ 601
E G+++ K A+K A+ AA IL+
Sbjct: 490 MERGVIEPVRVKKQAIKSASEAAIMILR 517
>sp|O24732|THSB_THEK8 Thermosome subunit beta OS=Thermococcus sp. (strain KS-8) GN=thsB
PE=3 SV=1
Length = 545
Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 140/293 (47%), Gaps = 52/293 (17%)
Query: 171 PAAIFQYYDKHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAA 230
P I + + G +A NI A + A+TVRT GP GM+K++++ + + +TND A
Sbjct: 8 PVVILPEGTQRYVG-RDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITNDGA 66
Query: 231 TIIRELEIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLI 290
TI+ E++I+HPAAK+++ ++ Q++E GDGT ++ AG LL A+ LL HP
Sbjct: 67 TILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHP----- 121
Query: 291 ILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTL 350
S I+ GY LA K EIL ++
Sbjct: 122 ---------------------------------------SIIIKGYALAAEKAQEILDSI 142
Query: 351 TCFEVKDVRNVENVTKGIKSAIMSKQYGNE-DFLTDLITKACVSILPDGSSSFNV--DNV 407
+V DV + E + K +AI K E ++L ++ +A + ++V DN+
Sbjct: 143 -ARDV-DVEDREILKKAAMTAITGKAAEEEREYLAEIAVEAVKQVAEKVGDRYHVDLDNI 200
Query: 408 RITKILGSGLFNSEIVQGMVFKRSV--EGDITKQTKAKIAVYTCPVDIATTET 458
+ K G + ++++++G+V + V G + AKIA+ +++ TET
Sbjct: 201 KFEKKEGGSVKDTQLIKGVVIDKEVVHPGMRKRVEGAKIALINEALEVKETET 253
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 51/94 (54%)
Query: 605 AKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAK 664
AKIA+ +++ TET + I S ++L F EE L E + I + GANVV
Sbjct: 237 AKIALINEALEVKETETDAEIRITSPEQLQAFLEQEEKMLREMVDKIKEVGANVVFVQKG 296
Query: 665 FGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNA 698
D+A HYL KYG+M VR K D+ +L KA A
Sbjct: 297 IDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGA 330
Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 57/142 (40%), Gaps = 46/142 (32%)
Query: 497 TLVIRGATENYMDDIERAVDDGVNTFKGIT------------------------------ 526
T++IRG TE+ +D++ERA++D V K I
Sbjct: 373 TILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIELAISVDEYAKEVGGK 432
Query: 527 ------------KVFVKTLAENTGVKSNEVISKLYSAHNEGKKTYGFDI-NGENSSVIDA 573
KV +TLA N G+ E + K+ +AH E T G D+ GE + D
Sbjct: 433 EQLAIEAFAEALKVIPRTLAGNAGLDPIETLVKVIAAHKEKGPTIGVDVFEGEPA---DM 489
Query: 574 AEAGILDLYLTKMWALKYATSA 595
E G++ A+K A +A
Sbjct: 490 LERGVIAPVRVPKQAIKSAKAA 511
>sp|Q9YDK6|THSA_AERPE Thermosome subunit alpha OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=thsA PE=3
SV=2
Length = 554
Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 142/284 (50%), Gaps = 58/284 (20%)
Query: 187 EAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHPAAKLI 246
EA+ NI A + A+ ++++ GP G++K++++ + VTND ATI++E+EI+HPAAKL+
Sbjct: 22 EALRANILAARVLAEMLKSSLGPRGLDKMLVDAFGDITVTNDGATIVKEMEIQHPAAKLL 81
Query: 247 ILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTN 306
+ ++ Q+ E+GDGT V++ AGALL A+ LL
Sbjct: 82 VEVAKAQDAEVGDGTTSVVVLAGALLEKAEKLLD-------------------------- 115
Query: 307 FVIIFAGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTLTC-FEVKDVRNVENVT 365
+NL P+ I+ GY A+ + L ++ EV+D ++V
Sbjct: 116 -------------ENL-----HPTIIIEGYTKAMEEALRLVDEAAVPVEVED----DSVL 153
Query: 366 KGIKSAIMSKQY---GNE-DFLTDLITKACVSIL---PDGSSSFNVDNVRITKILGSGLF 418
+ I ++ ++ G E D + ++ A ++ PDG ++D V+I K G L
Sbjct: 154 RRIAETTLASKFVGTGPERDKIISMVIDAIRTVAEKRPDGGYEVDLDYVKIEKKKGGSLL 213
Query: 419 NSEIVQGMVF-KRSVEGDITKQTK-AKIAVYTCPVDIATTETKT 460
+S++V+G+V K V + K+ + AKI V P+++ E T
Sbjct: 214 DSKLVRGIVLDKEVVHPAMPKRVENAKILVLDAPLEVQKPELTT 257
Score = 59.7 bits (143), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 118/272 (43%), Gaps = 25/272 (9%)
Query: 462 PAASELGYADSVAVDELGD--TAVVVFK---LEAAESRI-----ATLVIRGATENYMDDI 511
PAA L E+GD T+VVV LE AE + T++I G T M++
Sbjct: 76 PAAKLLVEVAKAQDAEVGDGTTSVVVLAGALLEKAEKLLDENLHPTIIIEGYT-KAMEEA 134
Query: 512 ERAVDDGVNTFKGITKVFVKTLAE--------NTGVKSNEVISKLYSAHN---EGKKTYG 560
R VD+ + ++ +AE TG + +++IS + A E + G
Sbjct: 135 LRLVDEAAVPVEVEDDSVLRRIAETTLASKFVGTGPERDKIISMVIDAIRTVAEKRPDGG 194
Query: 561 FDINGENSSVIDAAEAGILDLYLTKMWALKYATSAANTILQQTKAKIAVYTCPVDIATTE 620
++++ + + +LD L + L + AKI V P+++ E
Sbjct: 195 YEVDLDYVKIEKKKGGSLLDSKLVRGIVLDKEVVHPAMPKRVENAKILVLDAPLEVQKPE 254
Query: 621 TKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAKFGDMALHYLNKYGLMG 680
+ + ++L F E L + ++ IA TGANVV+ ++A H+L K G++
Sbjct: 255 LTTKIRVTDIEKLESFLEEETRMLRDMVEKIAATGANVVITQKGIDEVAQHFLAKKGILA 314
Query: 681 VRLNSKFDLRRLCKAVNA---TALPRLVSTYI 709
VR + D+ ++ KA A T+L L Y+
Sbjct: 315 VRRVKRSDIEKVAKATGAKIVTSLRDLKPEYL 346
Score = 40.0 bits (92), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 75/177 (42%), Gaps = 44/177 (24%)
Query: 467 LGYADSVAVDELGDTAVVVFKLEAAESRIATLVIRGATENYMDDIERAVDDGVNTFKGI- 525
LGYA+ V ++G+ +V F A + T+++RGA + +D+ ER + D ++ + I
Sbjct: 346 LGYAELVEERKVGEDKMV-FIEGAKNPKSVTILLRGANDMLLDEAERNIKDALHGLRNIL 404
Query: 526 -------------------TKVFVKT----------------------LAENTGVKSNEV 544
K F +T LAE+ G+ + E
Sbjct: 405 REPKIVGGGGAVEVELALKLKEFARTVGGKQQLAIEAYAEALETIPTVLAESAGMDALEA 464
Query: 545 ISKLYSAHNEGKKTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAANTILQ 601
+ KL S H++G K G ++ E D + + + L K +K A+ AA +IL+
Sbjct: 465 LLKLRSLHSQGYKFAGVNVL-EGKIEEDMTKINVYEPVLVKKQVIKSASEAAISILK 520
>sp|P61112|THSA_THEK1 Thermosome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=thsA
PE=1 SV=1
Length = 548
Score = 106 bits (265), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 139/293 (47%), Gaps = 52/293 (17%)
Query: 171 PAAIFQYYDKHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAA 230
P I + + G +A NI A + A+TVRT GP GM+K++++ + + VTND A
Sbjct: 8 PVVILPEGTQRYVG-RDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDGA 66
Query: 231 TIIRELEIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLI 290
TI+ +++++HPAAK+++ ++ Q++E GDGT ++ AG LL A+ LL HP
Sbjct: 67 TILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHP----- 121
Query: 291 ILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTL 350
S I+ GY LA K EIL +
Sbjct: 122 ---------------------------------------SIIIKGYALAAEKAQEILDEI 142
Query: 351 TCFEVKDVRNVENVTKGIKSAIMSKQY-GNEDFLTDLITKAC--VSILPDGSSSFNVDNV 407
D + E + K ++I K +++ L L +A V+ DG ++DN+
Sbjct: 143 AIR--VDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNI 200
Query: 408 RITKILGSGLFNSEIVQGMVF-KRSVEGDITKQTK-AKIAVYTCPVDIATTET 458
+ K G G+ SE+V+G+V K V + K+ + AKIA+ +++ TET
Sbjct: 201 KFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTET 253
Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 54/94 (57%)
Query: 605 AKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAK 664
AKIA+ +++ TET + I S D+LM F EE L++ + IA TGANVV
Sbjct: 237 AKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKG 296
Query: 665 FGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNA 698
D+A HYL KYG+M VR K D+ +L KA A
Sbjct: 297 IDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGA 330
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 89/219 (40%), Gaps = 55/219 (25%)
Query: 426 MVFKRSVEGDITKQTKAKIAVYTCPVDIATTETKTPPAASELGYADSVAVDELGDTAVVV 485
M +R + D+ K KA A V T E +LGYA+ V +L ++
Sbjct: 311 MAVRRVKKSDMEKLAKATGAKIVTNVKDLTPE--------DLGYAEVVEERKLAGENMI- 361
Query: 486 FKLEAAESRIATLVIRGATENYMDDIERAVDDGVNTFKGIT------------------- 526
F + T++IRG TE+ +D++ERA++D V K +
Sbjct: 362 FVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIR 421
Query: 527 -----------------------KVFVKTLAENTGVKSNEVISKLYSAHNEGKKTYGFDI 563
K+ KTLAEN G+ + E++ K+ S H G D+
Sbjct: 422 LDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDV 481
Query: 564 -NGENSSVIDAAEAGILDLYLTKMWALKYATSAANTILQ 601
G+ + D E GI++ K A+K A+ AA IL+
Sbjct: 482 FEGKPA---DMLEKGIIEPLRVKKQAIKSASEAAIMILR 517
>sp|P61111|THSA_PYRKO Thermosome subunit alpha OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=thsA PE=3 SV=1
Length = 548
Score = 106 bits (265), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 139/293 (47%), Gaps = 52/293 (17%)
Query: 171 PAAIFQYYDKHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAA 230
P I + + G +A NI A + A+TVRT GP GM+K++++ + + VTND A
Sbjct: 8 PVVILPEGTQRYVG-RDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDGA 66
Query: 231 TIIRELEIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLI 290
TI+ +++++HPAAK+++ ++ Q++E GDGT ++ AG LL A+ LL HP
Sbjct: 67 TILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHP----- 121
Query: 291 ILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTL 350
S I+ GY LA K EIL +
Sbjct: 122 ---------------------------------------SIIIKGYALAAEKAQEILDEI 142
Query: 351 TCFEVKDVRNVENVTKGIKSAIMSKQY-GNEDFLTDLITKAC--VSILPDGSSSFNVDNV 407
D + E + K ++I K +++ L L +A V+ DG ++DN+
Sbjct: 143 AIR--VDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNI 200
Query: 408 RITKILGSGLFNSEIVQGMVF-KRSVEGDITKQTK-AKIAVYTCPVDIATTET 458
+ K G G+ SE+V+G+V K V + K+ + AKIA+ +++ TET
Sbjct: 201 KFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTET 253
Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 54/94 (57%)
Query: 605 AKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAK 664
AKIA+ +++ TET + I S D+LM F EE L++ + IA TGANVV
Sbjct: 237 AKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKG 296
Query: 665 FGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNA 698
D+A HYL KYG+M VR K D+ +L KA A
Sbjct: 297 IDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGA 330
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 89/219 (40%), Gaps = 55/219 (25%)
Query: 426 MVFKRSVEGDITKQTKAKIAVYTCPVDIATTETKTPPAASELGYADSVAVDELGDTAVVV 485
M +R + D+ K KA A V T E +LGYA+ V +L ++
Sbjct: 311 MAVRRVKKSDMEKLAKATGAKIVTNVKDLTPE--------DLGYAEVVEERKLAGENMI- 361
Query: 486 FKLEAAESRIATLVIRGATENYMDDIERAVDDGVNTFKGIT------------------- 526
F + T++IRG TE+ +D++ERA++D V K +
Sbjct: 362 FVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIR 421
Query: 527 -----------------------KVFVKTLAENTGVKSNEVISKLYSAHNEGKKTYGFDI 563
K+ KTLAEN G+ + E++ K+ S H G D+
Sbjct: 422 LDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDV 481
Query: 564 -NGENSSVIDAAEAGILDLYLTKMWALKYATSAANTILQ 601
G+ + D E GI++ K A+K A+ AA IL+
Sbjct: 482 FEGKPA---DMLEKGIIEPLRVKKQAIKSASEAAIMILR 517
>sp|Q54CL2|TCPD_DICDI T-complex protein 1 subunit delta OS=Dictyostelium discoideum
GN=cct4 PE=3 SV=1
Length = 533
Score = 106 bits (264), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 135/261 (51%), Gaps = 54/261 (20%)
Query: 192 NISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHPAAKLIILGSQ 251
NI A + AD +RT+ GP GM+K++I+ +++ ++ND ATI++ LE+ HPAAK++ ++
Sbjct: 31 NIVAARAVADAIRTSLGPKGMDKMIISPNNEVLISNDGATILQNLELRHPAAKMLAELAK 90
Query: 252 MQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTNFVIIF 311
Q+ E GDGT V + AG+LL
Sbjct: 91 AQDIEAGDGTTSVCVIAGSLL--------------------------------------- 111
Query: 312 AGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTLTC-FEVKD-VRNVENVTKGIK 369
GA+ L+ G+ PS I + LAL K+LE+L +++ + D V V++ T +
Sbjct: 112 -GAV----SQLMAKGIHPSIISEAFNLALNKSLEVLVSMSVPVSLTDRVSLVKSATTSLN 166
Query: 370 SAIMSKQYGNEDFLTDLITKACVSIL-PDGSSSFNVDNVRITKILGSGLFNSEIVQGMVF 428
S ++S QY N L + A +S++ P + + N+ ++++ K LG + ++E+VQG+VF
Sbjct: 167 SKVVS-QYTN---LASIAVDAVLSVINPATAVNVNLKDIKLIKKLGGTIEDTELVQGLVF 222
Query: 429 KRSVE---GDITKQTKAKIAV 446
++ G T+ AKI +
Sbjct: 223 DQTASHTAGGPTRIQNAKIGL 243
>sp|Q53546|THS_DESSY Thermosome subunit OS=Desulfurococcus sp. (strain SY) GN=ths PE=3
SV=1
Length = 545
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 136/293 (46%), Gaps = 52/293 (17%)
Query: 171 PAAIFQYYDKHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAA 230
P I + + G +A NI A + A+T+RT GP GM+K++++ + + +TND A
Sbjct: 8 PVVILPEGTQRYVG-RDAQRLNILAARIVAETIRTTLGPKGMDKMLVDSLGDIVITNDGA 66
Query: 231 TIIRELEIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLI 290
TI+ E++I+HPAAK+++ ++ Q++E GDGT ++ AG LL A+ LL HP
Sbjct: 67 TILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLKKAEELLDQNIHP----- 121
Query: 291 ILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTL 350
S I+ GY LA K EIL +
Sbjct: 122 ---------------------------------------SIIIKGYALAAEKAQEILEGI 142
Query: 351 TCFEVKDVRNVENVTKGIKSAIMSKQYGNE-DFLTDLITKACVSILPDGSSSFNV--DNV 407
D +VE + K ++I K E ++L ++ +A + + V DN+
Sbjct: 143 AKEVSPD--DVETLKKAAVTSITGKAAEEEREYLAEIAVEAVRQVAEKVGDKYKVDLDNI 200
Query: 408 RITKILGSGLFNSEIVQGMVFKRSV--EGDITKQTKAKIAVYTCPVDIATTET 458
+ K G+ + +++++G+V + V G + AKIA+ +++ TET
Sbjct: 201 KFEKKEGASVHETQLIRGVVIDKEVVHPGMPKRVENAKIALINDALEVKETET 253
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 51/94 (54%)
Query: 605 AKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAK 664
AKIA+ +++ TET + I S ++L F EE L E + I + GANVV
Sbjct: 237 AKIALINDALEVKETETDAEIRITSPEQLQAFLEQEERMLREMVDKIKEVGANVVFVQKG 296
Query: 665 FGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNA 698
D+A HYL KYG+M VR K D+ +L KA A
Sbjct: 297 IDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGA 330
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 62/148 (41%), Gaps = 46/148 (31%)
Query: 497 TLVIRGATENYMDDIERAVDDGVNTFKGIT------------------------------ 526
T++IRG TE+ +D++ERA++D V K I
Sbjct: 373 TILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKILPAGGAPEIELAIKLDEYAKEVGGK 432
Query: 527 ------------KVFVKTLAENTGVKSNEVISKLYSAHNEGKKTYGFDI-NGENSSVIDA 573
KV +TLAEN G+ E + K+ +AH E T G D+ GE + D
Sbjct: 433 EQLAIEAFAEALKVIPRTLAENAGLDPVETLVKVIAAHKEKGPTIGVDVFEGEPA---DM 489
Query: 574 AEAGILDLYLTKMWALKYATSAANTILQ 601
E G++ A+K A+ AA IL+
Sbjct: 490 MEKGVIAPLRVPKQAIKSASEAAIMILR 517
>sp|Q52500|THSB_PYRKO Thermosome subunit beta OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=thsB PE=3 SV=1
Length = 546
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 139/293 (47%), Gaps = 52/293 (17%)
Query: 171 PAAIFQYYDKHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAA 230
P I + + G +A NI A + A+TVRT GP GM+K++++ + + +TND A
Sbjct: 8 PVVILPEGTQRYVG-RDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITNDGA 66
Query: 231 TIIRELEIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLI 290
TI+ E++I+HPAAK+++ ++ Q++E GDGT ++ AG LL A+ LL HP
Sbjct: 67 TILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHP----- 121
Query: 291 ILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTL 350
S I+ GY LA K EIL +
Sbjct: 122 ---------------------------------------SIIIKGYALAAEKAQEILDEI 142
Query: 351 TCFEVKDVRNVENVTKGIKSAIMSKQYGNE-DFLTDLITKACVSILPDGSSSFNV--DNV 407
+V DV + E + K ++I K E ++L ++ +A + ++ V DN+
Sbjct: 143 -AKDV-DVEDREILKKAAVTSITGKAAEEEREYLAEIAVEAVKQVAEKVGETYKVDLDNI 200
Query: 408 RITKILGSGLFNSEIVQGMVFKRSV--EGDITKQTKAKIAVYTCPVDIATTET 458
+ K G + ++++++G+V + V G + AKIA+ +++ TET
Sbjct: 201 KFEKKEGGSVKDTQLIKGVVIDKEVVHPGMPKRVEGAKIALINEALEVKETET 253
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 51/94 (54%)
Query: 605 AKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAK 664
AKIA+ +++ TET + I S ++L F EE L E + I + GANVV
Sbjct: 237 AKIALINEALEVKETETDAEIRITSPEQLQAFLEQEEKMLREMVDKIKEVGANVVFVQKG 296
Query: 665 FGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNA 698
D+A HYL KYG+M VR K D+ +L KA A
Sbjct: 297 IDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGA 330
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 62/148 (41%), Gaps = 46/148 (31%)
Query: 497 TLVIRGATENYMDDIERAVDDGVNTFKGIT------------------------------ 526
T++IRG TE+ +D++ERA++D V K I
Sbjct: 373 TILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIELAIRLDEYAKEVGGK 432
Query: 527 ------------KVFVKTLAENTGVKSNEVISKLYSAHNEGKKTYGFDI-NGENSSVIDA 573
KV +TLAEN G+ E + K+ +AH E T G D+ GE + D
Sbjct: 433 EQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAHKEKGPTIGVDVFEGEPA---DM 489
Query: 574 AEAGILDLYLTKMWALKYATSAANTILQ 601
E G++ A+K A+ AA IL+
Sbjct: 490 LERGVIAPVRVPKQAIKSASEAAIMILR 517
>sp|O24730|THSB_THEK1 Thermosome subunit beta OS=Thermococcus sp. (strain KS-1) GN=thsB
PE=3 SV=2
Length = 546
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 139/293 (47%), Gaps = 52/293 (17%)
Query: 171 PAAIFQYYDKHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAA 230
P I + + G +A NI A + A+TVRT GP GM+K++++ + + +TND A
Sbjct: 8 PVVILPEGTQRYVG-RDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITNDGA 66
Query: 231 TIIRELEIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLI 290
TI+ E++I+HPAAK+++ ++ Q++E GDGT ++ AG LL A+ LL HP
Sbjct: 67 TILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHP----- 121
Query: 291 ILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTL 350
S I+ GY LA K EIL +
Sbjct: 122 ---------------------------------------SIIIKGYALAAEKAQEILDEI 142
Query: 351 TCFEVKDVRNVENVTKGIKSAIMSKQYGNE-DFLTDLITKACVSILPDGSSSFNV--DNV 407
+V DV + E + K ++I K E ++L ++ +A + ++ V DN+
Sbjct: 143 -AKDV-DVEDREILKKAAVTSITGKAAEEEREYLAEIAVEAVKQVAEKVGETYKVDLDNI 200
Query: 408 RITKILGSGLFNSEIVQGMVFKRSV--EGDITKQTKAKIAVYTCPVDIATTET 458
+ K G + ++++++G+V + V G + AKIA+ +++ TET
Sbjct: 201 KFEKKEGGSVKDTQLIKGVVIDKEVVHPGMPKRVEGAKIALINEALEVKETET 253
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 51/94 (54%)
Query: 605 AKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAK 664
AKIA+ +++ TET + I S ++L F EE L E + I + GANVV
Sbjct: 237 AKIALINEALEVKETETDAEIRITSPEQLQAFLEQEEKMLREMVDKIKEVGANVVFVQKG 296
Query: 665 FGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNA 698
D+A HYL KYG+M VR K D+ +L KA A
Sbjct: 297 IDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGA 330
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 62/148 (41%), Gaps = 46/148 (31%)
Query: 497 TLVIRGATENYMDDIERAVDDGVNTFKGIT------------------------------ 526
T++IRG TE+ +D++ERA++D V K I
Sbjct: 373 TILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIELSIRLDEYAKEVGGK 432
Query: 527 ------------KVFVKTLAENTGVKSNEVISKLYSAHNEGKKTYGFDI-NGENSSVIDA 573
KV +TLAEN G+ E + K+ +AH E T G D+ GE + D
Sbjct: 433 EQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAHKEKGPTIGVDVFEGEPA---DM 489
Query: 574 AEAGILDLYLTKMWALKYATSAANTILQ 601
E G++ A+K A+ AA IL+
Sbjct: 490 LERGVIAPVRVPKQAIKSASEAAIMILR 517
>sp|P50991|TCPD_HUMAN T-complex protein 1 subunit delta OS=Homo sapiens GN=CCT4 PE=1 SV=4
Length = 539
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 142/292 (48%), Gaps = 51/292 (17%)
Query: 190 YRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHPAAKLIILG 249
+ NISA K AD +RT+ GP GM+K++ + + +TND ATI++++++ HPAA++++
Sbjct: 35 FSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVEL 94
Query: 250 SQMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTNFVI 309
S+ Q+ E GDGT V+I AG+LL + LL
Sbjct: 95 SKAQDIEAGDGTTSVVIIAGSLLDSCTKLL------------------------------ 124
Query: 310 IFAGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTLT-CFEVKDVRNVEN-VTKG 367
+ G+ P+ I ++ AL K +EIL ++ E+ D + N T
Sbjct: 125 --------------QKGIHPTIISESFQKALEKGIEILTDMSRPVELSDRETLLNSATTS 170
Query: 368 IKSAIMSKQYGNEDFLTDLITKACVSIL-PDGSSSFNVDNVRITKILGSGLFNSEIVQGM 426
+ S ++S QY + L+ + A + ++ P ++S ++ +++I K LG + + E+V+G+
Sbjct: 171 LNSKVVS-QYSS--LLSPMSVNAVMKVIDPATATSVDLRDIKIVKKLGGTIDDCELVEGL 227
Query: 427 VFKRSVEGD-ITKQTKAKIAVYTCPVDIATTETKTPPAASELGYADSVAVDE 477
V + V IT+ KAKI + + T+ S+ D V +E
Sbjct: 228 VLTQKVSNSGITRVEKAKIGLIQFCLSAPKTDMDNQIVVSDYAQMDRVLREE 279
Score = 38.5 bits (88), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 604 KAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGA 663
KAKI + + T+ +++ ++ + R E + +K I TG NV++
Sbjct: 243 KAKIGLIQFCLSAPKTDMDNQIVVSDYAQMDRVLREERAYILNLVKQIKKTGCNVLLIQK 302
Query: 664 K-----FGDMALHYLNKYGLMGVRLNSKFDLRRLCKAV 696
D+ALH+LNK +M ++ + D+ +CK +
Sbjct: 303 SILRDALSDLALHFLNKMKIMVIKDIEREDIEFICKTI 340
Score = 38.5 bits (88), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 519 VNTFKGITKVFVKTLAENTGVKSNEVISKLYSAHNEGKKTYGFDINGENSSVIDAAEAGI 578
V F +V TLAEN G+ +++L + H +G+KT G IN + + E +
Sbjct: 451 VRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTAG--INVRKGGISNILEELV 508
Query: 579 LDLYLTKMWALKYATSAANTILQ 601
+ L + AL AT +IL+
Sbjct: 509 VQPLLVSVSALTLATETVRSILK 531
>sp|O24731|THSA_THEK8 Thermosome subunit alpha OS=Thermococcus sp. (strain KS-8) GN=thsA
PE=3 SV=1
Length = 549
Score = 103 bits (258), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 143/293 (48%), Gaps = 52/293 (17%)
Query: 171 PAAIFQYYDKHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAA 230
P I + + G +A NI A + A+TVRT GP GM+K++++ + + VTND A
Sbjct: 8 PVVILPEGTQRYVG-RDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDGA 66
Query: 231 TIIRELEIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLI 290
TI+ +++++HPAAK+++ ++ Q++E GDGT ++ AG LL A+ LL HP+ +I
Sbjct: 67 TILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPS--II 124
Query: 291 ILGSQMQEEEMGDGTNFVIIFAGALLVNADN---LLRMGLTPSEIVNGYKLALAKTLEIL 347
I G + E+ + I+ A+ VN D+ LLR+ +T + G K E+L
Sbjct: 125 IKGYALAAEKAQE-----ILEEIAIKVNPDDEETLLRIAMTS---ITGKNAESHK--ELL 174
Query: 348 PTLTCFEVKDVRNVENVTKGIKSAIMSKQYGNEDFLTDLITKACVSILPDGSSSFNVDNV 407
L VK V + DG ++DN+
Sbjct: 175 AKLAVDAVKQVAEKK----------------------------------DGKYVVDLDNI 200
Query: 408 RITKILGSGLFNSEIVQGMVF-KRSVEGDITKQTK-AKIAVYTCPVDIATTET 458
+ K G G+ SE+V+G+V K V + K+ + AKIA+ +++ TET
Sbjct: 201 KFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVEGAKIALINEALEVKKTET 253
Score = 76.3 bits (186), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 54/94 (57%)
Query: 605 AKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAK 664
AKIA+ +++ TET + I S D+LM F EE L++ + IA TGANVV
Sbjct: 237 AKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKG 296
Query: 665 FGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNA 698
D+A HYL KYG+M VR K D+ +L KA A
Sbjct: 297 IDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGA 330
Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 83/213 (38%), Gaps = 55/213 (25%)
Query: 426 MVFKRSVEGDITKQTKAKIAVYTCPVDIATTETKTPPAASELGYADSVAVDELGDTAVVV 485
M +R + D+ K KA A V T E +LGYA+ V +L ++
Sbjct: 311 MAVRRVKKSDMEKLAKATGAKIVTNVKDLTPE--------DLGYAEIVEERKLAGENMI- 361
Query: 486 FKLEAAESRIATLVIRGATENYMDDIERAVDDGVNTFKGIT------------------- 526
F + T++IRG TE+ +D++ERA++D V K +
Sbjct: 362 FVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIS 421
Query: 527 -----------------------KVFVKTLAENTGVKSNEVISKLYSAHNEGKKTYGFDI 563
K+ KTLAEN G+ + E++ K+ S H G D+
Sbjct: 422 VDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEILVKVISEHKNKGLGIGIDV 481
Query: 564 -NGENSSVIDAAEAGILDLYLTKMWALKYATSA 595
GE + D E GI+ A+K A +A
Sbjct: 482 FAGEPA---DMLERGIIAPLRVTKQAIKSARAA 511
>sp|P80315|TCPD_MOUSE T-complex protein 1 subunit delta OS=Mus musculus GN=Cct4 PE=1 SV=3
Length = 539
Score = 103 bits (257), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 142/292 (48%), Gaps = 51/292 (17%)
Query: 190 YRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHPAAKLIILG 249
+ NISA K AD +RT+ GP GM+K++ + + +TND ATI++++++ HPAA++++
Sbjct: 35 FSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVEL 94
Query: 250 SQMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTNFVI 309
S+ Q+ E GDGT V+I AG+LL + LL
Sbjct: 95 SKAQDIEAGDGTTSVVIIAGSLLDSCTKLL------------------------------ 124
Query: 310 IFAGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTLT-CFEVKDVRNVEN-VTKG 367
+ G+ P+ I ++ AL K LEIL ++ ++ D + N T
Sbjct: 125 --------------QKGIHPTIISESFQKALEKGLEILTDMSRPVQLSDRETLLNSATTS 170
Query: 368 IKSAIMSKQYGNEDFLTDLITKACVSIL-PDGSSSFNVDNVRITKILGSGLFNSEIVQGM 426
+ S ++S QY + L+ + A + ++ P ++S ++ +++I K LG + + E+V+G+
Sbjct: 171 LNSKVVS-QYSS--LLSPMSVNAVMKVIDPATATSVDLRDIKIVKKLGGTIDDCELVEGL 227
Query: 427 VFKRSVEGD-ITKQTKAKIAVYTCPVDIATTETKTPPAASELGYADSVAVDE 477
V + V IT+ KAKI + + T+ S+ D V +E
Sbjct: 228 VLTQKVANSGITRVEKAKIGLIQFCLSAPKTDMDNQIVVSDYAQMDRVLREE 279
Score = 38.9 bits (89), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Query: 595 AANTILQQTKAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADT 654
A + I + KAKI + + T+ +++ ++ + R E + +K I T
Sbjct: 234 ANSGITRVEKAKIGLIQFCLSAPKTDMDNQIVVSDYAQMDRVLREERAYILNLVKQIKKT 293
Query: 655 GANVVVAGAK-----FGDMALHYLNKYGLMGVRLNSKFDLRRLCKAV 696
G NV++ D+ALH+LNK +M V+ + D+ +CK +
Sbjct: 294 GCNVLLIQKSILRDALSDLALHFLNKMKIMVVKDVEREDIEFICKTI 340
Score = 38.9 bits (89), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 519 VNTFKGITKVFVKTLAENTGVKSNEVISKLYSAHNEGKKTYGFDINGENSSVIDAAEAGI 578
V F +V TLAEN G+ +++L + H +G+KT G IN + + E +
Sbjct: 451 VRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTG--INVRKGGISNILEEMV 508
Query: 579 LDLYLTKMWALKYATSAANTILQ 601
+ L + AL AT +IL+
Sbjct: 509 VQPLLVSVSALTLATETVRSILK 531
>sp|Q7TPB1|TCPD_RAT T-complex protein 1 subunit delta OS=Rattus norvegicus GN=Cct4 PE=1
SV=3
Length = 539
Score = 103 bits (257), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 142/292 (48%), Gaps = 51/292 (17%)
Query: 190 YRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHPAAKLIILG 249
+ NISA K AD +RT+ GP GM+K++ + + +TND ATI++++++ HPAA++++
Sbjct: 35 FSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVEL 94
Query: 250 SQMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTNFVI 309
S+ Q+ E GDGT V+I AG+LL + LL
Sbjct: 95 SKAQDIEAGDGTTSVVIIAGSLLDSCTKLL------------------------------ 124
Query: 310 IFAGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTLT-CFEVKDVRNVEN-VTKG 367
+ G+ P+ I ++ AL K LEIL ++ ++ D + N T
Sbjct: 125 --------------QKGIHPTIISESFQKALEKGLEILTDMSRPVQLSDRETLLNSATTS 170
Query: 368 IKSAIMSKQYGNEDFLTDLITKACVSIL-PDGSSSFNVDNVRITKILGSGLFNSEIVQGM 426
+ S ++S QY + L+ + A + ++ P ++S ++ +++I K LG + + E+V+G+
Sbjct: 171 LNSKVVS-QYSS--LLSPMSVNAVMKVIDPATATSVDLRDIKIVKKLGGTIDDCELVEGL 227
Query: 427 VFKRSVEGD-ITKQTKAKIAVYTCPVDIATTETKTPPAASELGYADSVAVDE 477
V + V IT+ KAKI + + T+ S+ D V +E
Sbjct: 228 VLTQKVANSGITRVEKAKIGLIQFCLSAPKTDMDNQIVVSDYAQMDRVLREE 279
Score = 39.3 bits (90), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Query: 595 AANTILQQTKAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADT 654
A + I + KAKI + + T+ +++ ++ + R E + +K I T
Sbjct: 234 ANSGITRVEKAKIGLIQFCLSAPKTDMDNQIVVSDYAQMDRVLREERAYILNLVKQIKKT 293
Query: 655 GANVVVAGAK-----FGDMALHYLNKYGLMGVRLNSKFDLRRLCKAV 696
G NV++ D+ALH+LNK +M V+ + D+ +CK +
Sbjct: 294 GCNVLLIQKSILRDALSDLALHFLNKMKIMVVKDIEREDIEFICKTI 340
Score = 38.9 bits (89), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 519 VNTFKGITKVFVKTLAENTGVKSNEVISKLYSAHNEGKKTYGFDINGENSSVIDAAEAGI 578
V F +V TLAEN G+ +++L + H +G+KT G IN + + E +
Sbjct: 451 VRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTG--INVRKGGISNILEEMV 508
Query: 579 LDLYLTKMWALKYATSAANTILQ 601
+ L + AL AT +IL+
Sbjct: 509 VQPLLVSVSALTLATETVRSILK 531
>sp|Q5R637|TCPD_PONAB T-complex protein 1 subunit delta OS=Pongo abelii GN=CCT4 PE=2 SV=3
Length = 539
Score = 103 bits (257), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 141/292 (48%), Gaps = 51/292 (17%)
Query: 190 YRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHPAAKLIILG 249
+ NISA K AD +RT+ GP GM+K++ + + +TND ATI++++++ HPAA++++
Sbjct: 35 FSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVEL 94
Query: 250 SQMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTNFVI 309
S+ Q+ E GDGT V+I AG+LL + LL
Sbjct: 95 SKAQDIEAGDGTTSVVIIAGSLLDSCTKLL------------------------------ 124
Query: 310 IFAGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTLT-CFEVKDVRNVEN-VTKG 367
+ G+ P+ I ++ AL K +EIL ++ E+ D + N T
Sbjct: 125 --------------QKGIHPTIISESFQKALEKGIEILTDMSRPVELSDRETLLNSATTS 170
Query: 368 IKSAIMSKQYGNEDFLTDLITKACVSIL-PDGSSSFNVDNVRITKILGSGLFNSEIVQGM 426
+ S + S QY + L+ + A + ++ P ++S ++ +++I K LG + + E+V+G+
Sbjct: 171 LNSKVAS-QYSS--LLSPMSVNAVMKVIDPATATSVDLRDIKIVKKLGGTIDDCELVEGL 227
Query: 427 VFKRSVEGD-ITKQTKAKIAVYTCPVDIATTETKTPPAASELGYADSVAVDE 477
V + V IT+ KAKI + + T+ S+ D V +E
Sbjct: 228 VLTQKVSNSGITRVEKAKIGLIQFCLSAPKTDMDNQIVVSDYAQMDRVLREE 279
Score = 38.5 bits (88), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 604 KAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGA 663
KAKI + + T+ +++ ++ + R E + +K I TG NV++
Sbjct: 243 KAKIGLIQFCLSAPKTDMDNQIVVSDYAQMDRVLREERAYILNLVKQIKKTGCNVLLIQK 302
Query: 664 K-----FGDMALHYLNKYGLMGVRLNSKFDLRRLCKAV 696
D+ALH+LNK +M ++ + D+ +CK +
Sbjct: 303 SILRDALSDLALHFLNKMKIMVIKDIEREDIEFICKTI 340
Score = 38.5 bits (88), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 519 VNTFKGITKVFVKTLAENTGVKSNEVISKLYSAHNEGKKTYGFDINGENSSVIDAAEAGI 578
V F +V TLAEN G+ +++L + H +G+KT G IN + + E +
Sbjct: 451 VRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTAG--INVRKGGISNILEELV 508
Query: 579 LDLYLTKMWALKYATSAANTILQ 601
+ L + AL AT +IL+
Sbjct: 509 VQPLLVSVSALTLATETVRSILK 531
>sp|Q9HHA2|THS3_HALVD Thermosome subunit 3 OS=Haloferax volcanii (strain ATCC 29605 / DSM
3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 /
DS2) GN=cct3 PE=1 SV=2
Length = 524
Score = 102 bits (255), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 166/377 (44%), Gaps = 87/377 (23%)
Query: 192 NISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHPAAKLIILGSQ 251
NI A K A+ VRT GP GM+K++++ ++ +TND ATI+ +++IEHPAA++++ SQ
Sbjct: 28 NIRAGKAVAEAVRTTLGPRGMDKMLVDSSGEVVITNDGATILEKMDIEHPAAQMLVEVSQ 87
Query: 252 MQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTNFVIIF 311
QEEE+GDGT + G LL +A++LL
Sbjct: 88 TQEEEVGDGTTTAAVLTGELLAHAEDLLD------------------------------- 116
Query: 312 AGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTLTCFEVKDVRNVENVTKGIKSA 371
D+L P+ IV GY A + + + D + V +S+
Sbjct: 117 --------DDL-----HPTVIVEGYTEAARIAQDAIDDMVLDVTLDDDLLRKVA---ESS 160
Query: 372 IMSKQYGN--EDFLTDLITKACVSILPDGSSSFNVDNVRITKILGSGLFNSEIVQGMVF- 428
+ K G+ D L + KA + D + F+ D+VR+ G+ +E+V+G+V
Sbjct: 161 MTGKGTGDVTADVLAKHVVKAVQMVHEDDNGVFHRDDVRVLTRTGASSSATELVEGVVLD 220
Query: 429 KRSVEGDITKQ-TKAKIAVYTCPVDIATTETKTP---------PAA-----SEL-GYADS 472
K V ++ + + A +AV +D+ +E T AA SEL GYA +
Sbjct: 221 KEPVNENMPRSVSDATVAVLDMKLDVRKSEVDTEYNITSVDQLTAAIDAEDSELRGYAKA 280
Query: 473 VAVDELGDTAV-VVFKLEAAESRIATLVIRGATENYMDDIERAVDDGVNTFKGITKVFVK 531
+A D V VVF ++ + R+A + D G+ FK + K +
Sbjct: 281 LA-----DAGVDVVFCTKSIDDRVAGFL---------------ADAGILAFKSVKKSDAR 320
Query: 532 TLAENTGVKSNEVISKL 548
LA TG K +S L
Sbjct: 321 ALARATGAKRLGSLSDL 337
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 44/179 (24%)
Query: 465 SELGYADSVAVDELGDTAVVVFKLEAAESRIATLVIRGATENYMDDIERAVDDGVNTF-- 522
S+LG D+V++ GD + F A +R TL +RG TE+ +D++ERA++D V+
Sbjct: 340 SDLGRVDAVSIRSFGDDDLA-FVEGGAAARAVTLFLRGGTEHVVDELERAIEDAVDVVVA 398
Query: 523 ----------KGITKVFV------------------------------KTLAENTGVKSN 542
G T++ + +TLAENTG+
Sbjct: 399 AIDKGGVVPGAGATEIAIADRIRSEAAGIEGRKQLAVEAYADAVEALPRTLAENTGMDPI 458
Query: 543 EVISKLYSAHNEGKKTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAANTILQ 601
+ + L A E + G +G + + D E G++D K A++ AT AA I++
Sbjct: 459 DALVDLR-ARYETEGLAGIISSGRSGEIGDPVELGVIDPVAVKREAIESATEAATMIVR 516
Score = 42.0 bits (97), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 45/102 (44%)
Query: 603 TKAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAG 662
+ A +AV +D+ +E I S D+L E+++L KA+AD G +VV
Sbjct: 233 SDATVAVLDMKLDVRKSEVDTEYNITSVDQLTAAIDAEDSELRGYAKALADAGVDVVFCT 292
Query: 663 AKFGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNATALPRL 704
D +L G++ + K D R L +A A L L
Sbjct: 293 KSIDDRVAGFLADAGILAFKSVKKSDARALARATGAKRLGSL 334
>sp|O28821|THSB_ARCFU Thermosome subunit beta OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=thsB PE=3 SV=1
Length = 545
Score = 102 bits (255), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 125/273 (45%), Gaps = 55/273 (20%)
Query: 192 NISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHPAAKLIILGSQ 251
NI A + A+ VR+ GP GM+K++++ + + +TND TI++E+++EHPAAK+II ++
Sbjct: 28 NIMAARVIAEAVRSTLGPKGMDKMLVDSLGDVVITNDGVTILKEIDVEHPAAKMIIEVAK 87
Query: 252 MQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTNFVIIF 311
Q+ E+GDGT ++ AG LL A+ LL HPA
Sbjct: 88 TQDNEVGDGTTTAVVLAGELLKRAEELLDQEIHPAI------------------------ 123
Query: 312 AGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTLTCFEVKDVRNVENVTKGIKSA 371
I NGY+ A K LEIL + KD + + K I +
Sbjct: 124 --------------------IANGYRYAAEKALEILNEIAIPISKD---DDEILKKIATT 160
Query: 372 IMSKQYGNE---DFLTDLITKACVSILPD--GSSSFNVDNVRITKILGSGLFNSEIVQGM 426
M+ + G E D L ++ A I + G N D ++I K G + +E+V G+
Sbjct: 161 AMTGK-GAEVAIDKLAEIAVNAVKMIAEESNGQVEVNTDYIKIEKRQGGSIEETELVDGI 219
Query: 427 VFKRSV--EGDITKQTKAKIAVYTCPVDIATTE 457
V + V G + AKI + +++ TE
Sbjct: 220 VLDKEVVHPGMPKRVENAKILLLDSALEVKETE 252
Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 51/100 (51%)
Query: 605 AKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAK 664
AKI + +++ TE + I ++L KF EE L+E + I + GANVV
Sbjct: 237 AKILLLDSALEVKETEIDAKIRITDPEKLQKFIEQEEAMLKEMVDKIVNAGANVVFCQKG 296
Query: 665 FGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNATALPRL 704
D+A +YL K G++ VR K D+ +L KA A L L
Sbjct: 297 IDDLAQYYLAKAGVLAVRRVKKSDMEKLAKATGAKVLTDL 336
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 78/181 (43%), Gaps = 45/181 (24%)
Query: 463 AASELGYADSVAVDELGDTAVVVFKLEAAESRIATLVIRGATENYMDDIER--------- 513
++ +LG A V ++GD +V F + T+++RG TE+ +++I R
Sbjct: 340 SSEDLGEAALVEERKVGDEKMV-FVTGCKNPKAVTILVRGGTEHVVEEIARGIEDAVRAV 398
Query: 514 --AVDDG-------------------------------VNTFKGITKVFVKTLAENTGVK 540
AV+DG V F ++ +TLAEN G+
Sbjct: 399 ACAVEDGKVVVGAGAPEIEVSLKLREWAPSLGGREQLAVEAFATALEIIPRTLAENAGLD 458
Query: 541 SNEVISKLYSAHNEGKKTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAANTIL 600
+V+ +L +AH +G+K G D++ V+D E G+ + K A+ AT A IL
Sbjct: 459 PIDVLVELKAAHEKGQKYAGVDVD--TGKVVDMKERGVFEPLRVKTQAIGSATEVAVMIL 516
Query: 601 Q 601
+
Sbjct: 517 R 517
>sp|Q2T9X2|TCPD_BOVIN T-complex protein 1 subunit delta OS=Bos taurus GN=CCT4 PE=1 SV=3
Length = 542
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 133/262 (50%), Gaps = 53/262 (20%)
Query: 190 YRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHPAAKLIILG 249
+ NISA K AD +RT+ GP GM+K++ + + +TND ATI++
Sbjct: 38 FSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILK--------------- 82
Query: 250 SQMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTNFVI 309
QMQ + HPAA++++ S+ Q+ E GDGT V+
Sbjct: 83 -QMQ----------------------------VLHPAARMLVELSKAQDIEAGDGTTSVV 113
Query: 310 IFAGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTLTCFEVKDVRNVENVTKGIK 369
I AG+LL + LL+ G+ P+ I ++ AL K +EIL ++ E ++ + E +
Sbjct: 114 IIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPE--ELSDRETLLNSAA 171
Query: 370 SAIMSK---QYGNEDFLTDLITKACVSIL-PDGSSSFNVDNVRITKILGSGLFNSEIVQG 425
+++ SK QY + L+ + A + ++ P ++S ++ +++I K LG + + E+V+G
Sbjct: 172 TSLNSKVVSQYSS--LLSPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGTIDDCELVEG 229
Query: 426 MVFKRSVEGD-ITKQTKAKIAV 446
+V + V IT+ KAKI +
Sbjct: 230 LVLTQKVANSGITRVEKAKIGL 251
Score = 38.9 bits (89), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 519 VNTFKGITKVFVKTLAENTGVKSNEVISKLYSAHNEGKKTYGFDINGENSSVIDAAEAGI 578
+ F +V TLAEN G+ +++L + H +G+KT G IN + + E +
Sbjct: 454 IRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTG--INVRKGGISNILEEQV 511
Query: 579 LDLYLTKMWALKYATSAANTILQ 601
+ L + AL AT +IL+
Sbjct: 512 VQPLLVSVSALTLATETVRSILK 534
Score = 38.5 bits (88), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Query: 595 AANTILQQTKAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADT 654
A + I + KAKI + + T+ +++ ++ + R E + +K I T
Sbjct: 237 ANSGITRVEKAKIGLIQFCLSAPKTDMDNQIVVSDYVQMDRVLREERAYILNLVKQIKKT 296
Query: 655 GANVVVAGAK-----FGDMALHYLNKYGLMGVRLNSKFDLRRLCKAV 696
G NV++ D+ALH+LNK +M V+ + D+ +CK +
Sbjct: 297 GCNVLLIQKSILRDALSDLALHFLNKMKIMVVKDIEREDIEFICKTI 343
>sp|P47209|TCPE_CAEEL T-complex protein 1 subunit epsilon OS=Caenorhabditis elegans
GN=cct-5 PE=1 SV=1
Length = 542
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 143/288 (49%), Gaps = 52/288 (18%)
Query: 176 QYYDKHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRE 235
Q K +G+E AV +I A + A+T+RT+ GP G++K++++ + +TND ATI+ +
Sbjct: 23 QENQKRITGVE-AVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEK 81
Query: 236 LEIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQ 295
++++H AKL++ S+ Q+ E+GDGT V++ AGALL A+ L
Sbjct: 82 MDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKL----------------- 124
Query: 296 MQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTLT-CFE 354
+ G+ P +I +G+ LA K LE L +++ F
Sbjct: 125 ---------------------------IDRGIHPIKIADGFDLACKKALETLDSISDKFP 157
Query: 355 VKD-VRNVENVTKGIKSAIMSKQYGNEDFLTDLITKACVSILPDGSSSFNVDNVRITKIL 413
V++ R VE + S I+++ ++ A +S+ S N + +++ +
Sbjct: 158 VENRERLVETAQTSLGSKIVNRSLRQ---FAEIAVDAVLSVADIESKDVNFEMIKMEGKV 214
Query: 414 GSGLFNSEIVQGMVFKRSVEG-DITKQTK-AKIAVYTCPVDIATTETK 459
G L ++ +V+G+V +++ + K+ K AK+A+ TCP + +TK
Sbjct: 215 GGRLEDTILVKGIVIDKTMSHPQMPKELKNAKVAILTCPFEPPKPKTK 262
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%)
Query: 605 AKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAK 664
AK+A+ TCP + +TK + I S ++ E E I+ + ++GA + +
Sbjct: 245 AKVAILTCPFEPPKPKTKHKLDITSTEDFKALRDYERETFETMIRQVKESGATLAICQWG 304
Query: 665 FGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNATALPRL 704
F D A H L L VR ++ L A NA +PR
Sbjct: 305 FDDEANHLLQANDLPAVRWVGGPEIELLAIATNARIVPRF 344
>sp|P53451|TCPD_TAKRU T-complex protein 1 subunit delta OS=Takifugu rubripes GN=cct4 PE=2
SV=1
Length = 536
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 133/261 (50%), Gaps = 51/261 (19%)
Query: 190 YRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHPAAKLIILG 249
Y NISA K AD VRT+ GP GM+K++ + + +TND ATI++
Sbjct: 32 YSNISAAKAVADAVRTSLGPKGMDKMIQDEKGDVTITNDGATILK--------------- 76
Query: 250 SQMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTNFVI 309
QMQ + HP+AK+++ S+ Q+ E GDGT V+
Sbjct: 77 -QMQ----------------------------VLHPSAKMLVELSKAQDIEAGDGTTSVV 107
Query: 310 IFAGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTLTC-FEVKDVRNVEN-VTKG 367
+ AGALL + + LL+ G+ P+ I ++ A+ K +E+L ++ ++ D + N T
Sbjct: 108 VIAGALLDSCNRLLQRGIHPTIISESFQKAVDKGVEVLTAMSQPVQLGDRETLLNSATTS 167
Query: 368 IKSAIMSKQYGNEDFLTDLITKACVSIL-PDGSSSFNVDNVRITKILGSGLFNSEIVQGM 426
+ S ++S QY + L + A + ++ P ++S ++ +++I K LG + + E+V+G+
Sbjct: 168 LCSKVVS-QYSS--LLAPMSVDAVMRVIDPATATSVDLHDIKIIKKLGGTIDDCELVEGL 224
Query: 427 VF-KRSVEGDITKQTKAKIAV 446
V +R +++ KAKI +
Sbjct: 225 VLTQRVANSSVSRVEKAKIGL 245
Score = 37.7 bits (86), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 62/147 (42%), Gaps = 20/147 (13%)
Query: 570 VIDAAEAGILDLYLTKMW--------------ALKYATSAANTILQQT-KAKIAVYTCPV 614
VID A A +DL+ K+ L AN+ + + KAKI + +
Sbjct: 191 VIDPATATSVDLHDIKIIKKLGGTIDDCELVEGLVLTQRVANSSVSRVEKAKIGLIQFCL 250
Query: 615 DIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVV-----VAGAKFGDMA 669
T+ +++ ++ + R E + +K I G NV+ + D+A
Sbjct: 251 SPPKTDMDNQIVVSDYTQMDRVLREERAYILNMVKQIKKAGCNVLFIQKSILRDALSDLA 310
Query: 670 LHYLNKYGLMGVRLNSKFDLRRLCKAV 696
LH+LNK +M V+ + D+ +CK +
Sbjct: 311 LHFLNKMKIMVVKDIEREDIEFICKTI 337
Score = 35.0 bits (79), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 519 VNTFKGITKVFVKTLAENTGVKSNEVISKLYSAHNEGKKTYGFDINGENSSVIDAAEAGI 578
V + +V TLAEN G+ +++L + H +G K G IN + + E +
Sbjct: 448 VRAYSDALEVIPSTLAENAGLNPISTVTELRNRHAQGDKMAG--INVRKGGISNIMEELV 505
Query: 579 LDLYLTKMWALKYATSAANTILQ 601
+ L + AL AT +IL+
Sbjct: 506 VQPLLVSISALTLATETVRSILK 528
>sp|P41988|TCPA_CAEEL T-complex protein 1 subunit alpha OS=Caenorhabditis elegans
GN=cct-1 PE=3 SV=2
Length = 549
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 118/238 (49%), Gaps = 48/238 (20%)
Query: 191 RNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHPAAKLIILGS 250
+N++A A+ V+++ GP G++K++++ + + VTND ATI+++LE+EHPA K+++ +
Sbjct: 24 QNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHPAGKVLVELA 83
Query: 251 QMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTNFVII 310
Q+Q+EE+GDGT V+I A LL AD L++ H
Sbjct: 84 QLQDEEVGDGTTSVVIVAAELLKRADELVKQKVH-------------------------- 117
Query: 311 FAGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTLTCFEVKDVRNVENVTKGIKS 370
P+ I+NGY+LA + ++ + F D ++V K+
Sbjct: 118 ------------------PTTIINGYRLACKEAVKYISENISF-TSDSIGRQSVVNAAKT 158
Query: 371 AIMSKQYG-NEDFLTDLITKA--CVSILPDGSSSFNVDNVRITKILGSGLFNSEIVQG 425
++ SK G + DF +L+ A V + +G ++ ++ V + K G S +V+G
Sbjct: 159 SMSSKIIGPDADFFGELVVDAAEAVRVENNGKVTYPINAVNVLKAHGKSARESVLVKG 216
Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 115/265 (43%), Gaps = 71/265 (26%)
Query: 402 FNVDNVRITKILGSG------------LFNSEIVQ--GMVFKRSVEGDITKQTKAKIAVY 447
F++ RI KIL +G L + V+ M +R + D+ + KA A
Sbjct: 271 FDITKRRIDKILKAGANVVLTTGGIDDLCLKQFVESGAMAVRRCKKSDLKRIAKATGATL 330
Query: 448 TCPVDIATTETKTPPAASELGYADSVAVDELGDTAVVVFKLEAAESRIA-TLVIRGATEN 506
T V +AT E AS LG+AD + + + D +++ K +SR A ++++RGA +
Sbjct: 331 T--VSLATLEGDEAFDASLLGHADEIVQERISDDELILIK--GPKSRTASSIILRGANDV 386
Query: 507 YMDDIERAVDD------------------------------------------GVNTFKG 524
+D++ER+V D V F
Sbjct: 387 MLDEMERSVHDSLCVVRRVLESKKLVAGGGAVETSLSLFLETYAQTLSSREQLAVAEFAS 446
Query: 525 ITKVFVKTLAENTGVKSNEVISKLYSAHNEGK--------KTYGFDINGENSSVIDAAEA 576
+ K LA N S ++++KL + H++ + K G D+ E ++ D EA
Sbjct: 447 ALLIIPKVLASNAARDSTDLVTKLRAYHSKAQLIPQLQHLKWAGLDL--EEGTIRDNKEA 504
Query: 577 GILDLYLTKMWALKYATSAANTILQ 601
GIL+ L+K+ +LK+AT AA TIL+
Sbjct: 505 GILEPALSKVKSLKFATEAAITILR 529
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 65/148 (43%), Gaps = 4/148 (2%)
Query: 552 HNEGKKTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAANTILQQTKAKIAVYT 611
N GK TY IN N V+ A + L K +AL ++ L+ AKIA
Sbjct: 186 ENNGKVTY--PINAVN--VLKAHGKSARESVLVKGYALNCTVASQAMPLRVQNAKIACLD 241
Query: 612 CPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAKFGDMALH 671
+ A +V+++ +L R E + + +I I GANVV+ D+ L
Sbjct: 242 FSLMKAKMHLGISVVVEDPAKLEAIRREEFDITKRRIDKILKAGANVVLTTGGIDDLCLK 301
Query: 672 YLNKYGLMGVRLNSKFDLRRLCKAVNAT 699
+ G M VR K DL+R+ KA AT
Sbjct: 302 QFVESGAMAVRRCKKSDLKRIAKATGAT 329
>sp|O15891|TCPA_TETPY T-complex protein 1 subunit alpha OS=Tetrahymena pyriformis PE=3
SV=1
Length = 547
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 132/257 (51%), Gaps = 43/257 (16%)
Query: 192 NISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHPAAKLIILGSQ 251
N++A A+ V+++ GP G++K++++ + + +TND ATI+R+LE++HPAAK+I+ SQ
Sbjct: 21 NVTAVMAIANIVKSSLGPQGLDKMLVDDVGDVTITNDGATILRQLEVQHPAAKVIVELSQ 80
Query: 252 MQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTNFVIIF 311
+Q++E+GDGT V+I A LL A+ L++ HP + II G ++ +E
Sbjct: 81 LQDKEVGDGTTSVVILAAELLKRANELIKNKVHPTS--IITGFKIAAKEA------CTYI 132
Query: 312 AGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTLTCFEVKDVRNVENVTKGIKSA 371
L ++ + L R L +N K +++ L I P F V VE+V
Sbjct: 133 KEHLAISVEELGREAL-----INAAKTSMSSKL-IGPESNLFSQIVVDAVESVK------ 180
Query: 372 IMSKQYGNEDFLTDLITKACVSILPDGSSSFNVDNVRITKILGSGLFNSEIVQGMVF--K 429
+T+L+ G + + + NV+I K G S++++G V +
Sbjct: 181 -----------MTNLM----------GDTKYPIKNVKIIKSHGQSTLQSQLIRGYVLQTQ 219
Query: 430 RSVEGDITKQTKAKIAV 446
R + T+ KAKIA+
Sbjct: 220 RCDQQMKTRIEKAKIAL 236
Score = 56.2 bits (134), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 65/141 (46%)
Query: 566 ENSSVIDAAEAGILDLYLTKMWALKYATSAANTILQQTKAKIAVYTCPVDIATTETKGTV 625
+N +I + L L + + L+ + KAKIA+ ++ + +
Sbjct: 193 KNVKIIKSHGQSTLQSQLIRGYVLQTQRCDQQMKTRIEKAKIALLDFNLNKFRLQMGIQI 252
Query: 626 LIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAKFGDMALHYLNKYGLMGVRLNS 685
L+ L K E L+E+ K I + GANV++ A D+A YL + G+MG+R
Sbjct: 253 LVNDPKNLEKIRFKECEILKERCKKIIEAGANVIITSAGMDDVATKYLVEAGVMGLRRVD 312
Query: 686 KFDLRRLCKAVNATALPRLVS 706
K DLRRL KA T + L +
Sbjct: 313 KHDLRRLAKATGGTIVTTLAT 333
>sp|Q6FQT2|TCPD_CANGA T-complex protein 1 subunit delta OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=CCT4 PE=3 SV=1
Length = 529
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 139/298 (46%), Gaps = 54/298 (18%)
Query: 186 EEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHPAAKL 245
+E NI A + AD +RT+ GP GM+K++ ++ ++ND TI++++
Sbjct: 19 QEVRRANIVAARAVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQM--------- 69
Query: 246 IILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGT 305
I HP AK+++ S Q+ E GDGT
Sbjct: 70 -----------------------------------AILHPVAKMLVDVSAAQDSEAGDGT 94
Query: 306 NFVIIFAGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTLTCFEVKDVRNVENVT 365
V+I GALL AD LL G+ P+ I ++ A +++E L + C V + + E++
Sbjct: 95 TSVVILTGALLGAADRLLNKGIHPTIIAESFQKAARRSVETLLEI-CHPVS-LDDREDLI 152
Query: 366 KGIKSAIMSK---QYGNEDFLTDLITKACVSILPDGSSSFNVDNVRITKILGSGLFNSEI 422
+ +++ SK QY + FL+ L A +SI S + +++++R+ K +G + ++E+
Sbjct: 153 RAASTSLSSKIVSQYSS--FLSPLAVDAVLSITEKDSKTVDLNDIRLVKKVGGTIGDTEM 210
Query: 423 VQGMVFKRSV---EGDITKQTKAKIAVYTCPVDIATTETKTPPAASELGYADSVAVDE 477
V G+V ++V G T + KAKI + + +T+ S+ D + +E
Sbjct: 211 VDGVVLTQTVVKTAGGPTMKEKAKIGLIQFQISPPKPDTENNIVVSDYRQMDKILKEE 268
Score = 35.4 bits (80), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 522 FKGITKVFVKTLAENTGVKSNEVISKLYSAHNEGKKTYGFDINGENSSVIDAAEAGILDL 581
F +V TLAEN G+ S +VI++L S H G G + S + E IL
Sbjct: 444 FAQALEVIPTTLAENAGLNSIKVITELRSRHENGDVNEGISVR--RSGTTNTYEEHILQP 501
Query: 582 YLTKMWALKYATSAANTILQ 601
L A+ A+ +IL+
Sbjct: 502 VLVSTSAITLASECVKSILR 521
>sp|P28769|TCPA_ARATH T-complex protein 1 subunit alpha OS=Arabidopsis thaliana GN=CCT1
PE=2 SV=1
Length = 545
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 131/266 (49%), Gaps = 61/266 (22%)
Query: 191 RNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHPAAKLIILGS 250
+N+ AC+ ++ V+T+ GP G++K++++ I + +TND ATI+R LE+EHPAAK+++ +
Sbjct: 23 QNVMACQAVSNIVKTSLGPVGLDKMLVDDIGDVTITNDGATILRMLEVEHPAAKVLVELA 82
Query: 251 QMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTNFVII 310
++Q+ E+GDGT V+I A LL A++L+R H
Sbjct: 83 ELQDREVGDGTTSVVIVAAELLKRANDLVRNKIH-------------------------- 116
Query: 311 FAGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTLTCFEVKDVRNVENVTK---- 366
P+ I++GY+LA+ ++ + + E K V VE + K
Sbjct: 117 ------------------PTSIISGYRLAMRESCKYI------EEKLVTKVEKLGKVPLI 152
Query: 367 -GIKSAIMSKQY-GNEDFLTDLITKACVSIL---PDGSSSFNVDNVRITKILGSGLFNSE 421
K+++ SK G+ DF +L+ +A +S+ G + + + I K G +S
Sbjct: 153 NCAKTSMSSKLISGDSDFFANLVVEAVLSVKMTNQRGEIKYPIKGINILKAHGQSARDSY 212
Query: 422 IVQGMVFK--RSVEGDITKQTKAKIA 445
++ G R+ +G + + AKIA
Sbjct: 213 LLNGYALNTGRAAQGMPLRVSPAKIA 238
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 67/141 (47%), Gaps = 7/141 (4%)
Query: 580 DLYLTKMWALKYATSAANTILQQTKAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRG 639
D YL +AL +A L+ + AKIA + + V++ EL K +
Sbjct: 210 DSYLLNGYALNTGRAAQGMPLRVSPAKIACLDFNLQKTKMQLGVQVVVNDPRELEKIRQR 269
Query: 640 EENQLEEQIKAIADTGANVVVAGAKFGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNAT 699
E + +E+I+ + GANV++ DMAL Y + G + VR K D+R + KA AT
Sbjct: 270 EADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHVAKATGAT 329
Query: 700 ALPRLVSTYIKM---PSFCPA 717
LV+T+ M +F PA
Sbjct: 330 ----LVTTFADMEGEETFDPA 346
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 109/259 (42%), Gaps = 71/259 (27%)
Query: 408 RITKILGSG---LFNSEIVQGMVFKRSVEG-----------DITKQTKAKIA-VYTCPVD 452
RI K+L +G + ++ + M K VE D+ KA A + T D
Sbjct: 277 RIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHVAKATGATLVTTFAD 336
Query: 453 IATTETKTPPAASELGYADSVAVDELGDTAVVVFKLEAAESRIATLVIRGATENYMDDIE 512
+ ET P + LG AD V + + D V++ K S + +L++RGA + +D++E
Sbjct: 337 MEGEETFDP---AHLGSADEVVEERIADDDVILIKGTKTSSAV-SLILRGANDYMLDEME 392
Query: 513 RAVDDGV---------NT---------------------------------FKGITKVFV 530
RA+ D + NT F +
Sbjct: 393 RALHDALCIVKRTLESNTVVAGGGAVESALSVYLEHLATTLGSREQLAIAEFADALLIIP 452
Query: 531 KTLAENTGVKSNEVISKLYSAHNEG-----KKTY---GFDINGENSSVIDAAEAGILDLY 582
K LA N + E+++KL + H+ KK Y G D+ N ++ + EAG+++
Sbjct: 453 KVLAVNAAKDATELVAKLRAYHHTAQTKADKKHYSSMGLDL--VNGTIRNNLEAGVIEPA 510
Query: 583 LTKMWALKYATSAANTILQ 601
++K+ +++AT AA TIL+
Sbjct: 511 MSKVKIIQFATEAAITILR 529
>sp|Q94757|TCPA_SCHMA T-complex protein 1 subunit alpha OS=Schistosoma mansoni GN=TCP-1A
PE=2 SV=1
Length = 545
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 70/95 (73%)
Query: 191 RNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHPAAKLIILGS 250
+N+ A FA+ V+T+ GP G++K++++ + + +TND ATI++ L++EHPAAK+++ +
Sbjct: 17 QNVLAACSFANFVKTSLGPVGLDKMLVDDVGDVTITNDGATILKLLDVEHPAAKILVQLA 76
Query: 251 QMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHP 285
Q+Q+EE+GDGT V+I A ALL NAD L+ HP
Sbjct: 77 QLQDEEVGDGTTSVVILAAALLKNADELISRFVHP 111
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 55/229 (24%)
Query: 423 VQGMVFKRSVEGDITKQTKAKIAVYTCPVDIATTETKTPPAASELGYADSVAVDELGDTA 482
V M +R + D+ KA V +A E ++LG A+ V+ + + D
Sbjct: 300 VNAMAVRRCKKVDLKNMAKATGGQLI--VSLADMEGDEVFDPTKLGNAEEVSQERICDDE 357
Query: 483 VVVFKLEAAESRIATLVIRGATENYMDDIERAVDDGVNTFKGI--------------TKV 528
+++ + A++++RGA + Y+D++ER++ D + K + T V
Sbjct: 358 LIILRGPKVHPS-ASIILRGANDFYVDEMERSLHDALLVVKRVLESKRIVPGAGACETAV 416
Query: 529 FV----------------------------KTLAENTGVKSNEVISKLYSAHNEGK---- 556
+ K LA N GV S E++++L S HN +
Sbjct: 417 SIYLENYALTLSSREQLAIAEFARAMLSIPKQLAVNAGVDSTELVARLRSCHNSSQSKPD 476
Query: 557 ----KTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAANTILQ 601
K +G D+N N V D E G+ + ++K+ +LK+AT AA TIL+
Sbjct: 477 QAHNKWWGLDLN--NQYVADCKEIGVFEPLVSKIKSLKFATEAAITILR 523
Score = 42.0 bits (97), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%)
Query: 604 KAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGA 663
KAKIA + + V++K +L + E + +E+I+ I + GANV++
Sbjct: 228 KAKIAFLDFSLQKVKMKLGVQVVVKDPAQLEAIRQREADITKERIQKILNAGANVILTTG 287
Query: 664 KFGDMALHYLNKYGLMGVRLNSKFDLRRLCKA 695
D+ + Y + M VR K DL+ + KA
Sbjct: 288 GIDDLCMKYFVEVNAMAVRRCKKVDLKNMAKA 319
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 265,510,959
Number of Sequences: 539616
Number of extensions: 11172123
Number of successful extensions: 35113
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 557
Number of HSP's successfully gapped in prelim test: 665
Number of HSP's that attempted gapping in prelim test: 31933
Number of HSP's gapped (non-prelim): 3287
length of query: 745
length of database: 191,569,459
effective HSP length: 125
effective length of query: 620
effective length of database: 124,117,459
effective search space: 76952824580
effective search space used: 76952824580
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)