Query psy16434
Match_columns 745
No_of_seqs 284 out of 2760
Neff 6.1
Searched_HMMs 29240
Date Fri Aug 16 21:12:45 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16434.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16434hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ko1_A Chaperonin; 9-fold symm 100.0 3.3E-72 1.1E-76 643.5 32.8 389 170-608 14-532 (553)
2 3ruv_A Chaperonin, CPN; double 100.0 9.6E-72 3.3E-76 639.1 35.2 385 173-608 6-518 (543)
3 3iyg_Q T-complex protein 1 sub 100.0 1.3E-71 4.5E-76 634.5 34.2 384 177-607 1-510 (512)
4 3iyg_H T-complex protein 1 sub 100.0 1.3E-71 4.4E-76 634.5 33.8 380 176-607 1-512 (515)
5 3iyg_A T-complex protein 1 sub 100.0 3.5E-71 1.2E-75 633.0 34.4 379 179-607 3-526 (529)
6 1q3q_A Thermosome alpha subuni 100.0 5.5E-71 1.9E-75 633.5 32.7 388 171-608 8-524 (548)
7 1a6d_B Thermosome (beta subuni 100.0 4E-71 1.4E-75 634.3 30.9 388 171-608 6-522 (543)
8 3iyg_G T-complex protein 1 sub 100.0 1.2E-70 4.1E-75 626.8 34.1 379 179-607 2-512 (515)
9 3iyg_B T-complex protein 1 sub 100.0 1.8E-70 6.1E-75 625.0 34.1 378 178-607 2-509 (513)
10 1a6d_A Thermosome (alpha subun 100.0 1.1E-70 3.8E-75 630.6 32.1 386 171-608 7-521 (545)
11 3p9d_H T-complex protein 1 sub 100.0 6.9E-72 2.4E-76 643.1 21.3 392 172-609 11-548 (568)
12 3iyg_D T-complex protein 1 sub 100.0 2.7E-70 9.3E-75 624.2 34.2 381 179-608 4-517 (518)
13 3p9d_G T-complex protein 1 sub 100.0 1.4E-71 4.7E-76 638.4 22.8 385 171-608 9-526 (550)
14 3p9d_A T-complex protein 1 sub 100.0 2.9E-70 9.9E-75 628.5 30.9 384 175-608 13-547 (559)
15 3iyg_E T-complex protein 1 sub 100.0 8.1E-70 2.8E-74 620.1 33.6 380 180-607 4-513 (515)
16 3p9d_D T-complex protein 1 sub 100.0 9.7E-71 3.3E-75 628.9 25.1 385 175-608 8-527 (528)
17 3p9d_E T-complex protein 1 sub 100.0 1.6E-69 5.5E-74 622.7 34.1 390 171-608 28-557 (562)
18 3iyg_Z T-complex protein 1 sub 100.0 9.8E-70 3.4E-74 619.2 30.9 373 182-607 6-515 (517)
19 3p9d_C T-complex protein 1 sub 100.0 6.5E-70 2.2E-74 627.1 28.2 387 171-607 4-584 (590)
20 3p9d_B T-complex protein 1 sub 100.0 3.8E-70 1.3E-74 624.3 21.9 385 172-608 3-517 (527)
21 3p9d_F T-complex protein 1 sub 100.0 5.8E-70 2E-74 625.0 19.4 388 173-608 4-536 (546)
22 3aq1_B Thermosome subunit; gro 100.0 5.6E-61 1.9E-65 545.4 23.9 345 215-608 1-475 (500)
23 1iok_A Chaperonin 60; chaperon 100.0 7.2E-60 2.5E-64 539.9 29.5 353 186-608 10-524 (545)
24 1we3_A CPN60(groel); chaperoni 100.0 1.1E-59 3.7E-64 538.6 29.6 352 186-607 9-523 (543)
25 1kp8_A Groel protein; chaperon 100.0 2.9E-59 9.9E-64 534.8 30.4 351 186-607 9-521 (547)
26 3rtk_A 60 kDa chaperonin 2; he 100.0 8.5E-60 2.9E-64 538.3 22.9 354 183-608 7-520 (546)
27 3iyg_G T-complex protein 1 sub 100.0 3.6E-34 1.2E-38 326.5 3.9 268 460-732 61-354 (515)
28 1ass_A Thermosome; chaperonin, 100.0 2.8E-33 9.5E-38 272.8 7.5 154 584-737 1-156 (159)
29 1gml_A T-complex protein 1 sub 100.0 4.9E-33 1.7E-37 275.9 9.3 155 578-732 1-158 (178)
30 3iyg_B T-complex protein 1 sub 100.0 5.3E-33 1.8E-37 316.7 5.1 268 460-732 64-352 (513)
31 3iyg_H T-complex protein 1 sub 100.0 6.8E-33 2.3E-37 315.8 5.8 285 444-732 47-355 (515)
32 3iyg_A T-complex protein 1 sub 100.0 5.1E-33 1.8E-37 317.9 3.5 268 460-732 62-361 (529)
33 3iyg_Z T-complex protein 1 sub 100.0 7E-33 2.4E-37 315.9 3.5 267 460-733 62-359 (517)
34 3iyg_E T-complex protein 1 sub 100.0 3.1E-32 1.1E-36 310.6 4.5 270 460-732 62-355 (515)
35 3aq1_B Thermosome subunit; gro 100.0 3.4E-32 1.2E-36 309.1 2.3 273 460-733 25-318 (500)
36 1a6d_B Thermosome (beta subuni 100.0 7.4E-33 2.5E-37 317.5 -3.2 271 460-733 73-365 (543)
37 3p9d_H T-complex protein 1 sub 100.0 1.4E-31 4.9E-36 308.1 7.0 283 444-733 62-375 (568)
38 3iyg_D T-complex protein 1 sub 100.0 1.3E-31 4.6E-36 305.5 4.3 270 460-733 63-359 (518)
39 3ruv_A Chaperonin, CPN; double 100.0 1.9E-32 6.6E-37 313.9 -3.4 270 460-733 71-360 (543)
40 1q3q_A Thermosome alpha subuni 100.0 7.5E-32 2.6E-36 309.4 0.6 287 444-733 59-367 (548)
41 3ko1_A Chaperonin; 9-fold symm 100.0 1E-31 3.5E-36 308.3 1.4 270 460-732 82-373 (553)
42 3p9d_F T-complex protein 1 sub 100.0 1.7E-32 5.7E-37 314.8 -6.1 267 460-732 69-370 (546)
43 3p9d_G T-complex protein 1 sub 100.0 4.6E-32 1.6E-36 311.1 -4.3 286 444-732 60-368 (550)
44 1a6d_A Thermosome (alpha subun 100.0 6.7E-31 2.3E-35 301.3 4.4 287 444-733 58-364 (545)
45 3iyg_Q T-complex protein 1 sub 100.0 1.9E-30 6.6E-35 295.7 7.2 269 460-733 63-351 (512)
46 3p9d_C T-complex protein 1 sub 100.0 5.1E-31 1.7E-35 303.8 1.0 272 460-733 71-372 (590)
47 3p9d_D T-complex protein 1 sub 100.0 2.2E-30 7.7E-35 295.9 3.0 287 444-733 55-367 (528)
48 3p9d_A T-complex protein 1 sub 100.0 2E-31 6.7E-36 306.4 -7.6 270 460-732 76-377 (559)
49 3p9d_E T-complex protein 1 sub 100.0 1E-31 3.6E-36 308.9 -10.1 286 444-732 81-398 (562)
50 3p9d_B T-complex protein 1 sub 99.9 1.9E-30 6.6E-35 296.6 -7.4 269 460-733 70-360 (527)
51 1we3_A CPN60(groel); chaperoni 99.7 9.6E-20 3.3E-24 208.6 -5.7 240 460-733 62-335 (543)
52 3rtk_A 60 kDa chaperonin 2; he 99.7 4.1E-19 1.4E-23 203.0 -1.1 239 460-733 62-335 (546)
53 1iok_A Chaperonin 60; chaperon 99.7 1.3E-19 4.4E-24 207.5 -7.4 239 460-733 63-337 (545)
54 1kp8_A Groel protein; chaperon 99.7 4.1E-19 1.4E-23 203.4 -3.9 240 460-733 62-336 (547)
55 1gml_A T-complex protein 1 sub 99.3 3.7E-12 1.3E-16 126.0 9.4 89 417-506 1-174 (178)
56 1ass_A Thermosome; chaperonin, 98.6 3.3E-08 1.1E-12 96.0 5.4 69 423-491 1-153 (159)
57 3m6c_A 60 kDa chaperonin 1; ch 95.8 0.0072 2.5E-07 59.8 4.9 37 420-456 2-47 (194)
58 3osx_A 60 kDa chaperonin; alph 93.8 0.061 2.1E-06 53.4 5.3 32 424-455 13-53 (201)
59 1srv_A Protein (groel (HSP60 c 92.9 0.036 1.2E-06 52.5 1.8 31 425-455 1-40 (145)
60 3m6c_A 60 kDa chaperonin 1; ch 91.7 0.69 2.4E-05 45.7 9.4 102 595-720 23-140 (194)
61 1srv_A Protein (groel (HSP60 c 91.4 0.58 2E-05 44.3 8.2 103 595-721 17-135 (145)
62 3osx_A 60 kDa chaperonin; alph 91.1 0.7 2.4E-05 45.9 8.8 102 595-720 30-147 (201)
63 1x6e_A Zinc finger protein 24; 90.8 0.075 2.6E-06 42.9 1.3 46 37-95 10-55 (72)
64 1x5w_A Zinc finger protein 64, 90.6 0.078 2.7E-06 42.4 1.3 45 38-95 6-50 (70)
65 2epr_A POZ-, at HOOK-, and zin 89.5 0.12 4.2E-06 38.1 1.5 40 38-90 9-48 (48)
66 3uk3_C Zinc finger protein 217 89.0 0.074 2.5E-06 40.5 -0.1 43 39-94 2-44 (57)
67 2eps_A POZ-, at HOOK-, and zin 88.3 0.18 6.2E-06 38.4 1.8 43 38-93 9-52 (54)
68 2drp_A Protein (tramtrack DNA- 88.0 0.16 5.6E-06 39.8 1.4 51 33-94 2-52 (66)
69 2lce_A B-cell lymphoma 6 prote 87.9 0.11 3.9E-06 41.9 0.4 44 39-95 15-58 (74)
70 2adr_A ADR1; transcription reg 87.9 0.12 4E-06 39.8 0.4 43 40-95 1-43 (60)
71 1bbo_A Human enhancer-binding 87.5 0.13 4.4E-06 39.1 0.5 42 41-95 1-42 (57)
72 2cot_A Zinc finger protein 435 85.8 0.19 6.4E-06 40.9 0.6 45 38-95 15-59 (77)
73 2ee8_A Protein ODD-skipped-rel 85.6 0.3 1E-05 42.0 1.8 44 38-94 42-85 (106)
74 2kmk_A Zinc finger protein GFI 85.3 0.21 7.3E-06 40.5 0.7 44 38-94 26-69 (82)
75 2d9h_A Zinc finger protein 692 85.2 0.17 6E-06 41.1 0.1 48 38-95 4-51 (78)
76 1x6h_A Transcriptional repress 84.9 0.31 1.1E-05 40.0 1.5 50 37-95 11-60 (86)
77 1f2i_G Fusion of N-terminal 17 84.2 0.27 9.3E-06 39.3 0.8 46 37-95 15-62 (73)
78 2epq_A POZ-, at HOOK-, and zin 83.7 0.27 9.1E-06 35.6 0.5 40 37-89 6-45 (45)
79 4gzn_C ZFP-57, zinc finger pro 83.5 0.25 8.7E-06 39.4 0.4 43 40-95 3-45 (60)
80 2yt9_A Zinc finger-containing 83.2 0.33 1.1E-05 40.7 1.0 27 40-68 34-60 (95)
81 2ee8_A Protein ODD-skipped-rel 82.6 0.39 1.3E-05 41.2 1.3 45 38-95 14-58 (106)
82 2lv2_A Insulinoma-associated p 81.4 0.4 1.4E-05 41.0 0.8 46 37-95 24-69 (85)
83 2dmd_A Zinc finger protein 64, 81.3 0.38 1.3E-05 40.4 0.7 27 40-68 35-61 (96)
84 2ct1_A Transcriptional repress 81.2 0.42 1.4E-05 38.7 0.9 48 37-95 11-58 (77)
85 2dmd_A Zinc finger protein 64, 81.0 0.47 1.6E-05 39.8 1.1 44 38-94 5-48 (96)
86 2el6_A Zinc finger protein 268 79.8 0.67 2.3E-05 33.5 1.5 39 37-88 8-46 (46)
87 2dlq_A GLI-kruppel family memb 79.4 0.56 1.9E-05 41.1 1.1 44 38-94 63-106 (124)
88 2csh_A Zinc finger protein 297 78.7 0.62 2.1E-05 40.3 1.2 27 39-68 8-34 (110)
89 2dlq_A GLI-kruppel family memb 78.7 0.54 1.8E-05 41.2 0.8 42 39-93 5-46 (124)
90 2ctd_A Zinc finger protein 512 78.3 0.56 1.9E-05 40.6 0.7 45 37-95 30-75 (96)
91 1a1h_A QGSR zinc finger peptid 78.2 0.48 1.6E-05 39.2 0.3 44 38-94 31-74 (90)
92 2dlk_A Novel protein; ZF-C2H2 77.5 0.71 2.4E-05 37.2 1.1 42 38-92 35-78 (79)
93 2elz_A Zinc finger protein 224 77.0 0.87 3E-05 32.9 1.4 39 37-88 8-46 (46)
94 2eml_A Zinc finger protein 28 76.8 0.97 3.3E-05 32.6 1.6 39 37-88 8-46 (46)
95 2emm_A ZFP-95, zinc finger pro 76.7 0.84 2.9E-05 32.8 1.2 39 37-88 8-46 (46)
96 2eme_A Zinc finger protein 473 76.3 1 3.4E-05 32.4 1.6 39 37-88 8-46 (46)
97 2ytg_A ZFP-95, zinc finger pro 75.7 0.83 2.8E-05 32.9 0.9 39 37-88 8-46 (46)
98 2yt9_A Zinc finger-containing 75.6 0.98 3.3E-05 37.7 1.5 44 38-94 4-47 (95)
99 2enc_A Zinc finger protein 224 75.5 0.96 3.3E-05 32.6 1.3 39 37-88 8-46 (46)
100 2em7_A Zinc finger protein 224 75.2 1.2 4.1E-05 32.1 1.7 39 37-88 8-46 (46)
101 1llm_C Chimera of ZIF23-GCN4; 75.1 0.67 2.3E-05 38.6 0.3 26 41-68 3-28 (88)
102 2kmk_A Zinc finger protein GFI 74.9 0.73 2.5E-05 37.2 0.5 41 41-94 1-41 (82)
103 2ene_A Zinc finger protein 347 74.3 1.1 3.8E-05 32.2 1.4 39 37-88 8-46 (46)
104 2csh_A Zinc finger protein 297 74.3 0.74 2.5E-05 39.8 0.4 45 38-95 34-78 (110)
105 2ep0_A Zinc finger protein 28 74.1 1.1 3.6E-05 32.3 1.2 39 37-88 8-46 (46)
106 2em5_A ZFP-95, zinc finger pro 74.0 1.1 3.9E-05 32.3 1.3 39 37-88 8-46 (46)
107 2emf_A Zinc finger protein 484 73.9 1.2 4.2E-05 32.1 1.5 33 37-71 8-40 (46)
108 2gqj_A Zinc finger protein KIA 73.6 0.24 8.2E-06 42.6 -2.9 46 37-95 20-67 (98)
109 2ysp_A Zinc finger protein 224 73.6 1 3.4E-05 32.5 0.9 39 37-88 8-46 (46)
110 2em8_A Zinc finger protein 224 73.5 0.98 3.4E-05 32.6 0.9 39 37-88 8-46 (46)
111 2em0_A Zinc finger protein 224 73.5 1.1 3.9E-05 32.1 1.3 39 37-88 8-46 (46)
112 1eo1_A Hypothetical protein MT 72.9 7.7 0.00026 34.9 7.0 52 647-699 57-108 (124)
113 2epz_A Zinc finger protein 28 72.7 0.98 3.4E-05 32.5 0.7 38 38-88 9-46 (46)
114 2el4_A Zinc finger protein 268 72.7 1.5 5E-05 31.5 1.7 39 37-88 8-46 (46)
115 2eoe_A Zinc finger protein 347 72.6 1.1 3.6E-05 32.3 0.9 39 37-88 8-46 (46)
116 2eov_A Zinc finger protein 484 72.4 1 3.5E-05 32.3 0.8 39 37-88 8-46 (46)
117 2em9_A Zinc finger protein 224 72.2 1.6 5.5E-05 31.3 1.8 39 37-88 8-46 (46)
118 2ema_A Zinc finger protein 347 71.7 1.4 4.9E-05 31.6 1.4 33 37-71 8-40 (46)
119 2ytj_A Zinc finger protein 484 71.1 1.5 5E-05 31.6 1.3 33 37-71 8-40 (46)
120 2eq4_A Zinc finger protein 224 70.9 1 3.6E-05 32.3 0.5 39 37-88 8-46 (46)
121 1vd4_A Transcription initiatio 70.6 1.5 5.1E-05 34.3 1.4 41 37-93 10-50 (62)
122 2yu8_A Zinc finger protein 347 70.4 1.1 3.9E-05 32.2 0.6 39 37-88 8-46 (46)
123 2epw_A Zinc finger protein 268 70.0 1.4 4.9E-05 31.5 1.1 39 37-88 8-46 (46)
124 2ghf_A ZHX1, zinc fingers and 70.0 1.3 4.3E-05 39.2 0.9 50 37-96 14-64 (102)
125 2eoq_A Zinc finger protein 224 69.9 1.3 4.5E-05 31.8 0.8 39 37-88 8-46 (46)
126 2emk_A Zinc finger protein 28 69.5 1.4 4.7E-05 31.8 0.9 39 37-88 8-46 (46)
127 1o13_A Probable NIFB protein; 69.4 7.6 0.00026 35.9 6.2 53 646-699 67-119 (136)
128 2ep2_A Zinc finger protein 484 69.4 1.6 5.6E-05 31.3 1.3 33 37-71 8-40 (46)
129 2wbt_A B-129; zinc finger; 2.7 69.4 1.1 3.6E-05 40.0 0.3 41 39-94 72-112 (129)
130 2en1_A Zinc finger protein 224 69.1 1.7 5.9E-05 31.1 1.4 39 37-88 8-46 (46)
131 2en6_A Zinc finger protein 268 69.0 1.5 5.1E-05 31.5 1.0 39 37-88 8-46 (46)
132 2yx6_A Hypothetical protein PH 69.0 8.3 0.00028 34.5 6.2 53 646-699 54-106 (121)
133 2ytm_A Zinc finger protein 28 68.5 0.97 3.3E-05 32.7 -0.2 39 37-88 8-46 (46)
134 2ytk_A Zinc finger protein 347 68.5 1.6 5.6E-05 31.3 1.1 33 37-71 8-40 (46)
135 2emx_A Zinc finger protein 268 68.3 1.7 5.7E-05 30.9 1.1 39 37-88 6-44 (44)
136 2emy_A Zinc finger protein 268 68.2 1.7 5.9E-05 31.1 1.2 39 37-88 8-46 (46)
137 2emp_A Zinc finger protein 347 68.1 1.4 4.9E-05 31.6 0.7 39 37-88 8-46 (46)
138 2ytr_A Zinc finger protein 347 68.0 1.1 3.8E-05 32.1 0.1 39 37-88 8-46 (46)
139 2yso_A ZFP-95, zinc finger pro 67.9 1.5 5.3E-05 31.4 0.9 39 37-88 8-46 (46)
140 2ytn_A Zinc finger protein 347 67.9 1.6 5.4E-05 31.4 0.9 39 37-88 8-46 (46)
141 2ely_A Zinc finger protein 224 67.8 1.3 4.5E-05 31.9 0.5 39 37-88 8-46 (46)
142 2eop_A Zinc finger protein 268 67.5 1.4 4.9E-05 31.5 0.6 39 37-88 8-46 (46)
143 2ytt_A Zinc finger protein 473 67.5 0.88 3E-05 32.9 -0.6 39 37-88 8-46 (46)
144 2eq0_A Zinc finger protein 347 67.3 1.6 5.6E-05 31.3 0.9 39 37-88 8-46 (46)
145 2lt7_A Transcriptional regulat 66.2 1.8 6.2E-05 39.7 1.2 45 37-94 18-62 (133)
146 2en8_A Zinc finger protein 224 65.6 1.8 6.3E-05 30.9 0.9 39 37-88 8-46 (46)
147 2wfb_A Putative uncharacterize 65.6 9.7 0.00033 34.0 5.9 53 646-699 58-111 (120)
148 2ebt_A Krueppel-like factor 5; 65.0 2.4 8.2E-05 35.5 1.6 44 38-94 42-87 (100)
149 2ytq_A Zinc finger protein 268 64.9 1.9 6.6E-05 31.0 0.9 39 37-88 8-46 (46)
150 1wjp_A Zinc finger protein 295 64.5 1.1 3.8E-05 38.6 -0.7 42 40-95 41-82 (107)
151 2epx_A Zinc finger protein 28 64.2 2.1 7.2E-05 30.7 1.0 39 37-88 8-47 (47)
152 2ytd_A Zinc finger protein 473 64.2 2.3 7.7E-05 30.5 1.1 39 37-88 8-46 (46)
153 1a1h_A QGSR zinc finger peptid 63.8 2 6.9E-05 35.2 0.9 42 40-94 3-46 (90)
154 2i13_A AART; DNA binding, zinc 63.7 1.4 4.8E-05 41.9 -0.1 42 40-94 132-173 (190)
155 2emh_A Zinc finger protein 484 63.2 1.8 6E-05 31.1 0.4 33 37-71 8-40 (46)
156 2ep3_A Zinc finger protein 484 63.2 2.6 9E-05 30.1 1.3 33 37-71 8-40 (46)
157 2dmi_A Teashirt homolog 3; zin 62.8 3.4 0.00012 35.8 2.2 48 36-95 14-63 (115)
158 2lt7_A Transcriptional regulat 61.8 2 6.9E-05 39.4 0.6 26 40-67 49-74 (133)
159 1rdu_A Conserved hypothetical 61.6 8.9 0.00031 34.0 4.9 52 647-699 54-105 (116)
160 2elo_A Zinc finger protein 406 61.6 2.2 7.5E-05 28.9 0.6 33 37-71 5-37 (37)
161 1wjp_A Zinc finger protein 295 61.2 1.7 5.9E-05 37.3 -0.0 44 37-95 12-55 (107)
162 6rxn_A Rubredoxin; electron tr 60.9 1.6 5.4E-05 33.4 -0.3 37 40-91 3-39 (46)
163 2dmi_A Teashirt homolog 3; zin 59.6 1.8 6.2E-05 37.6 -0.2 44 41-95 50-93 (115)
164 2elx_A Zinc finger protein 406 58.6 3.5 0.00012 27.2 1.2 32 38-71 4-35 (35)
165 2eoo_A ZFP-95, zinc finger pro 58.1 2.9 9.9E-05 30.0 0.8 33 37-71 8-40 (46)
166 1klr_A Zinc finger Y-chromosom 57.7 2.3 8E-05 26.7 0.2 29 41-71 2-30 (30)
167 1llm_C Chimera of ZIF23-GCN4; 57.0 1 3.4E-05 37.4 -2.2 43 38-94 28-70 (88)
168 2wbs_A Krueppel-like factor 4; 56.5 3.1 0.00011 34.0 0.8 44 38-94 32-77 (89)
169 2em2_A Zinc finger protein 28 56.2 3.8 0.00013 29.3 1.2 33 37-71 8-40 (46)
170 1x5w_A Zinc finger protein 64, 54.2 4.2 0.00014 31.9 1.2 36 37-74 33-68 (70)
171 2re2_A Uncharacterized protein 53.1 20 0.0007 33.0 5.9 52 646-699 70-121 (136)
172 2jp9_A Wilms tumor 1; DNA bind 52.9 3.4 0.00012 35.7 0.5 44 38-94 33-78 (119)
173 2m0d_A Zinc finger and BTB dom 52.0 4.2 0.00014 25.5 0.7 28 40-69 2-29 (30)
174 2i13_A AART; DNA binding, zinc 51.7 3.2 0.00011 39.4 0.1 42 39-93 47-88 (190)
175 2ej4_A Zinc finger protein ZIC 50.9 5.8 0.0002 32.8 1.6 51 41-95 25-75 (95)
176 2epa_A Krueppel-like factor 10 48.9 5.4 0.00019 31.4 1.1 45 37-94 13-61 (72)
177 2eos_A B-cell lymphoma 6 prote 47.8 5.7 0.00019 27.7 0.9 33 37-71 7-39 (42)
178 2epv_A Zinc finger protein 268 47.0 9.3 0.00032 26.9 2.0 35 37-73 8-42 (44)
179 2j7j_A Transcription factor II 46.5 4.8 0.00017 32.3 0.4 29 38-68 28-58 (85)
180 2eod_A TNF receptor-associated 45.9 6.6 0.00023 30.5 1.1 43 38-95 7-50 (66)
181 2ept_A Zinc finger protein 32; 44.3 9.2 0.00031 26.4 1.6 32 38-71 7-38 (41)
182 2em6_A Zinc finger protein 224 43.7 6.8 0.00023 27.9 0.8 25 60-95 1-25 (46)
183 2jp9_A Wilms tumor 1; DNA bind 43.5 6.3 0.00022 33.9 0.7 44 38-94 3-50 (119)
184 2eon_A ZFP-95, zinc finger pro 43.5 7.2 0.00025 27.8 0.9 33 37-71 8-40 (46)
185 2ent_A Krueppel-like factor 15 43.0 9.6 0.00033 27.1 1.5 39 37-88 8-48 (48)
186 2wbs_A Krueppel-like factor 4; 42.9 8.2 0.00028 31.3 1.3 44 38-94 2-49 (89)
187 1njq_A Superman protein; zinc- 42.3 7.7 0.00026 26.5 0.9 32 38-71 3-34 (39)
188 1ubd_C Protein (YY1 zinc finge 42.1 8.1 0.00028 33.6 1.2 42 39-93 32-75 (124)
189 2el5_A Zinc finger protein 268 42.1 9.8 0.00033 26.3 1.4 33 37-71 6-38 (42)
190 3psh_A Protein HI_1472; substr 41.8 40 0.0014 34.8 6.7 52 648-699 77-154 (326)
191 2ytb_A Zinc finger protein 32; 41.7 7.7 0.00026 26.8 0.8 33 37-71 7-39 (42)
192 2rpc_A Zinc finger protein ZIC 41.6 9.2 0.00032 34.7 1.6 53 39-95 23-75 (155)
193 2rpc_A Zinc finger protein ZIC 40.8 8.5 0.00029 35.0 1.2 44 39-95 88-135 (155)
194 2epc_A Zinc finger protein 32; 40.2 10 0.00036 26.1 1.3 33 37-71 7-39 (42)
195 2emi_A Zinc finger protein 484 40.1 11 0.00039 26.6 1.6 33 37-71 8-40 (46)
196 2ytp_A Zinc finger protein 484 39.8 11 0.00036 26.8 1.4 33 37-71 8-40 (46)
197 2em3_A Zinc finger protein 28 39.8 9.6 0.00033 27.0 1.1 33 37-71 8-40 (46)
198 2ctu_A Zinc finger protein 483 39.1 3.4 0.00012 32.2 -1.6 37 39-88 37-73 (73)
199 4rxn_A Rubredoxin; electron tr 39.0 4.1 0.00014 32.2 -1.1 44 40-91 2-45 (54)
200 2eow_A Zinc finger protein 347 38.9 9.3 0.00032 27.0 0.9 33 37-71 8-40 (46)
201 2r79_A Periplasmic binding pro 38.8 56 0.0019 33.0 7.1 52 648-699 52-111 (283)
202 2enh_A Zinc finger protein 28 38.2 8.4 0.00029 27.4 0.5 33 37-71 8-40 (46)
203 2qtd_A Uncharacterized protein 38.1 52 0.0018 28.4 5.9 49 649-699 50-98 (105)
204 2enf_A Zinc finger protein 347 38.1 9.7 0.00033 27.0 0.9 33 37-71 8-40 (46)
205 2j7j_A Transcription factor II 38.0 7.2 0.00025 31.2 0.2 41 41-94 1-45 (85)
206 2yth_A Zinc finger protein 224 37.8 12 0.00041 26.5 1.3 33 37-71 8-40 (46)
207 2kfq_A FP1; protein, de novo p 37.6 8.3 0.00028 25.2 0.4 29 41-71 2-30 (32)
208 2etv_A Iron(III) ABC transport 37.4 46 0.0016 34.9 6.4 52 648-699 89-151 (346)
209 2kvf_A Zinc finger and BTB dom 37.2 9.4 0.00032 23.6 0.6 26 40-67 2-27 (28)
210 2yu5_A Zinc finger protein 473 37.1 10 0.00035 26.5 0.9 33 37-71 8-40 (44)
211 2yts_A Zinc finger protein 484 37.1 13 0.00046 26.1 1.5 33 37-71 8-40 (46)
212 2q8p_A Iron-regulated surface 36.6 39 0.0013 33.5 5.4 52 648-699 53-110 (260)
213 2eoz_A Zinc finger protein 473 36.3 10 0.00035 26.9 0.7 33 37-71 8-40 (46)
214 2yrj_A Zinc finger protein 473 35.8 13 0.00046 26.1 1.3 33 37-71 8-40 (46)
215 1ubd_C Protein (YY1 zinc finge 35.7 12 0.00042 32.4 1.3 43 39-95 3-47 (124)
216 2r7a_A Bacterial heme binding 35.7 67 0.0023 31.7 7.0 52 648-699 52-112 (256)
217 1srk_A Zinc finger protein ZFP 35.6 15 0.00053 24.0 1.6 31 38-70 4-34 (35)
218 2yrm_A B-cell lymphoma 6 prote 35.3 11 0.00038 26.4 0.8 33 37-71 6-38 (43)
219 2emj_A Zinc finger protein 28 34.9 12 0.00042 26.5 1.0 33 37-71 8-40 (46)
220 2eq2_A Zinc finger protein 347 34.7 13 0.00043 26.3 1.0 33 37-71 8-40 (46)
221 2eq1_A Zinc finger protein 347 34.7 10 0.00034 26.9 0.5 33 37-71 8-40 (46)
222 3md9_A Hemin-binding periplasm 34.2 59 0.002 32.1 6.3 52 648-699 52-111 (255)
223 1p7a_A BF3, BKLF, kruppel-like 34.0 11 0.00038 25.1 0.6 30 37-68 7-36 (37)
224 2wi8_A Iron-uptake system-bind 33.8 63 0.0022 33.1 6.7 52 648-699 89-144 (311)
225 2em4_A Zinc finger protein 28 33.6 14 0.00047 26.2 1.1 33 37-71 8-40 (46)
226 2eox_A Zinc finger protein 473 33.6 10 0.00036 26.5 0.4 33 37-71 8-40 (44)
227 2elq_A Zinc finger protein 406 33.1 14 0.0005 24.4 1.1 29 38-68 6-34 (36)
228 2en7_A Zinc finger protein 268 33.0 9.8 0.00034 26.5 0.2 33 37-71 8-40 (44)
229 2ytf_A Zinc finger protein 268 33.0 15 0.0005 25.9 1.2 33 37-71 8-40 (46)
230 1ard_A Yeast transcription fac 32.9 9.9 0.00034 23.5 0.2 26 41-68 2-27 (29)
231 2eq3_A Zinc finger protein 347 32.6 12 0.00041 26.4 0.6 33 37-71 8-40 (46)
232 2emb_A Zinc finger protein 473 32.3 16 0.00054 25.5 1.2 33 37-71 8-40 (44)
233 2epu_A Zinc finger protein 32; 32.3 14 0.00049 25.9 1.0 33 37-71 8-40 (45)
234 2lvt_A Zinc finger and BTB dom 38.3 9.7 0.00033 23.8 0.0 26 40-67 1-26 (29)
235 1n2z_A Vitamin B12 transport p 32.0 51 0.0018 32.4 5.4 52 648-699 50-108 (245)
236 2yto_A Zinc finger protein 484 32.0 14 0.00048 26.1 0.9 33 37-71 8-40 (46)
237 2eom_A ZFP-95, zinc finger pro 32.0 13 0.00045 26.4 0.7 33 37-71 8-40 (46)
238 2dlk_A Novel protein; ZF-C2H2 31.9 16 0.00055 28.9 1.3 44 38-94 4-52 (79)
239 2ep1_A Zinc finger protein 484 31.7 14 0.00049 26.0 0.9 33 37-71 8-40 (46)
240 2kvg_A Zinc finger and BTB dom 31.3 11 0.00037 23.4 0.2 25 40-66 2-26 (27)
241 2elv_A Zinc finger protein 406 31.2 17 0.00058 24.0 1.2 29 38-68 6-34 (36)
242 2eoy_A Zinc finger protein 473 31.1 16 0.00054 25.9 1.0 33 37-71 8-41 (46)
243 2en9_A Zinc finger protein 28 31.0 13 0.00043 26.4 0.5 33 37-71 8-40 (46)
244 2eof_A Zinc finger protein 268 30.8 14 0.00048 25.7 0.7 33 37-71 8-40 (44)
245 2en3_A ZFP-95, zinc finger pro 30.4 10 0.00035 26.9 -0.1 33 37-71 8-40 (46)
246 2emg_A Zinc finger protein 484 30.2 14 0.00048 26.1 0.6 33 37-71 8-40 (46)
247 2yte_A Zinc finger protein 473 30.1 13 0.00043 25.6 0.4 33 37-71 6-38 (42)
248 2gli_A Protein (five-finger GL 29.8 15 0.00052 33.1 0.9 15 54-68 50-64 (155)
249 2eoh_A Zinc finger protein 28 29.5 16 0.00055 25.8 0.9 33 37-71 8-40 (46)
250 2elr_A Zinc finger protein 406 29.5 13 0.00045 24.4 0.4 30 38-69 6-35 (36)
251 2en2_A B-cell lymphoma 6 prote 29.4 14 0.00046 25.5 0.4 33 37-71 7-39 (42)
252 2eor_A Zinc finger protein 224 29.1 14 0.00047 26.1 0.4 33 37-71 8-40 (46)
253 3ga8_A HTH-type transcriptiona 29.0 6.7 0.00023 32.8 -1.5 43 42-93 3-47 (78)
254 2kvh_A Zinc finger and BTB dom 28.9 16 0.00055 22.3 0.7 25 40-66 2-26 (27)
255 4hn9_A Iron complex transport 28.6 90 0.0031 32.4 6.8 51 648-699 109-165 (335)
256 1yui_A GAGA-factor; complex (D 28.5 15 0.00052 27.1 0.6 33 37-71 20-52 (54)
257 2eoj_A Zinc finger protein 268 28.2 16 0.00055 25.4 0.6 33 37-71 8-40 (44)
258 2yti_A Zinc finger protein 347 28.1 15 0.0005 26.0 0.4 33 37-71 8-40 (46)
259 1rim_A E6APC2 peptide; E6-bind 28.0 16 0.00054 24.0 0.5 29 41-71 2-30 (33)
260 2els_A Zinc finger protein 406 28.0 16 0.00056 24.1 0.6 29 38-68 6-34 (36)
261 2m0e_A Zinc finger and BTB dom 27.4 12 0.00042 22.8 -0.1 28 40-69 1-28 (29)
262 2lvr_A Zinc finger and BTB dom 33.2 13 0.00045 23.1 0.0 26 40-67 2-27 (30)
263 1tf6_A Protein (transcription 27.1 23 0.00077 33.3 1.7 43 39-94 102-148 (190)
264 2eou_A Zinc finger protein 473 26.8 15 0.00052 25.7 0.3 33 37-71 8-40 (44)
265 2elt_A Zinc finger protein 406 26.2 21 0.00073 23.3 1.0 29 38-68 6-34 (36)
266 1rik_A E6APC1 peptide; E6-bind 25.9 21 0.0007 22.0 0.8 26 41-68 2-27 (29)
267 2gli_A Protein (five-finger GL 25.5 19 0.00066 32.3 0.8 44 38-94 64-111 (155)
268 2emz_A ZFP-95, zinc finger pro 25.2 13 0.00045 26.3 -0.3 33 37-71 8-40 (46)
269 1znf_A 31ST zinc finger from X 24.6 20 0.0007 21.6 0.6 25 41-67 1-25 (27)
270 1dx8_A Rubredoxin; electron tr 24.1 11 0.00039 31.1 -0.9 44 40-91 6-49 (70)
271 2lvu_A Zinc finger and BTB dom 29.4 17 0.00058 22.0 0.0 24 41-66 2-25 (26)
272 2cot_A Zinc finger protein 435 23.1 31 0.0011 27.2 1.6 32 38-71 43-74 (77)
273 2m0f_A Zinc finger and BTB dom 22.6 19 0.00065 22.0 0.1 27 40-68 1-27 (29)
274 2ebt_A Krueppel-like factor 5; 22.5 30 0.001 28.4 1.4 45 37-94 11-59 (100)
275 3iuf_A Zinc finger protein UBI 21.9 20 0.00068 26.0 0.1 34 37-72 3-37 (48)
276 1pqv_S STP-alpha, transcriptio 21.4 24 0.00083 37.2 0.7 40 41-94 268-308 (309)
277 1tf6_A Protein (transcription 21.3 27 0.00092 32.8 0.9 42 37-94 130-176 (190)
278 3tny_A YFIY (ABC transport sys 20.4 82 0.0028 32.0 4.5 52 648-699 89-144 (303)
No 1
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=3.3e-72 Score=643.53 Aligned_cols=389 Identities=29% Similarity=0.491 Sum_probs=352.2
Q ss_pred CceeecccccccccChHHHHHHHHHHHHHHHhhccccccccccceeeecCCCCeEEecCHHHHHhhccccChhhHHHHHH
Q psy16434 170 LPAAIFQYYDKHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHPAAKLIILG 249 (745)
Q Consensus 170 ~~~~~~~~~~~~~~g~~~a~~~ni~~~~~la~~v~tsLGP~G~~KmIv~~~g~i~ITnDG~tIlk~l~~~hP~akll~~~ 249 (745)
.|..+|+++.++.+| .+++.+|+.||.+|+++|+|||||+||||||+++.|+++|||||+||||+|+++||+|||++++
T Consensus 14 ~~~~~l~~~~~~~~g-~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~ 92 (553)
T 3ko1_A 14 IPVIILKEGSSRTYG-KEAVRANIAAVKAVEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPAAKLLVQI 92 (553)
T ss_dssp --------------C-HHHHHHHHHHHHHHHHHHGGGCSTTCCEEEEECTTSCEEEECCHHHHHHSSCCCSHHHHHHHHH
T ss_pred CeEEEEecCcccchh-HHHHHHHHHHHHHHHHHHHhccCCcchhhHHHhhccceEEecCccchhhhhhccChhHHHHHHH
Confidence 367789999999999 5899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhchhcCccchhhhHhhhhhhhhHHHHHhhhchhhHHHhhhccccccccCCCCchhHHHHHHHHHHHHHhhhCCCCH
Q psy16434 250 SQMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTP 329 (745)
Q Consensus 250 s~~qd~~~GDGt~~~~~~~~~~l~~~~~~~~~~~~~~~~l~v~~~~~q~~~~GDgTTsvVvLa~eLL~~a~~li~~gihP 329 (745)
|++||+++||| |||+|+||++||+++.+++++|+||
T Consensus 93 a~~qd~e~GDG--------------------------------------------TTtvvVLA~eLL~~a~~li~~GihP 128 (553)
T 3ko1_A 93 AKGQDEETADG--------------------------------------------TKTAVIFSGELVKKAEDLLYKDVHP 128 (553)
T ss_dssp HHTCSSSSSTT--------------------------------------------HHHHHHHHHHHHHHHHHHHHTTCCH
T ss_pred hhCCcccccCC--------------------------------------------ceeEEEehHHHHHhHHHHHhcCCCc
Confidence 99999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcccccccccccCcccccccceeeeccccccCCC-hhhHHHHHHHHHHhhcCCCCC--CCCccc
Q psy16434 330 SEIVNGYKLALAKTLEILPTLTCFEVKDVRNVENVTKGIKSAIMSKQYGN-EDFLTDLITKACVSILPDGSS--SFNVDN 406 (745)
Q Consensus 330 ~~I~~g~~~a~~~~l~~L~~~s~~~~~~~~~~~~L~~va~tsl~sK~~~~-~~~ls~LivdAv~~v~~~~~~--~~dl~~ 406 (745)
+.|++||++|++.+++.|++++++. +..+++.|.++|+|+++||+++. +++|++|+++|+.+++++..+ .+|+++
T Consensus 129 ~~I~~G~~~A~~~a~~~L~~~s~~v--~~~d~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~G~~~~dl~~ 206 (553)
T 3ko1_A 129 TIIISGYKKAEEVALQTIQELAQTV--SINDTDLLRKIAMTSLSSKAVAGAREYIADIVVKAVTQVAELRGDKWYVDLDN 206 (553)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEEC--CTTCHHHHHHHHHHHHTTSSCCTTHHHHHHHHHHHHHHHCCCTTSSCCCCGGG
T ss_pred eEEehhhhHHHHHHHHHHHHhcCCC--CCCcHHHHHHHHHHHhhHHhhhhHHHHHHHHHHHHHHHHHHhcCCceEEechh
Confidence 9999999999999999999998773 33478899999999999999985 799999999999999875323 389999
Q ss_pred eEEEEccCCCcccceeEeeEEEeecccC--CceeeeCceEEEeccCCCccccccC-------------------------
Q psy16434 407 VRITKILGSGLFNSEIVQGMVFKRSVEG--DITKQTKAKIAVYTCPVDIATTETK------------------------- 459 (745)
Q Consensus 407 I~I~ki~Ggs~~dS~lv~G~~l~~~~~~--~~~~i~nakIlil~~~Le~~k~e~k------------------------- 459 (745)
|+|+++.|+++.||++++||+|++++.| +|++++||||++++++|++.+++.+
T Consensus 207 I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ 286 (553)
T 3ko1_A 207 IQIVKKAGGSINDTQLVYGIVVDKEVVHPGMPKRLENAKIALIDASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEK 286 (553)
T ss_dssp EEEEECCCSCGGGCEEESEEEECSCBSCTTSCSCCBSCEEEEECSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCccccceeeEEEEecccccCCCCccccccceEEEecCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999986 5999999999999999999876532
Q ss_pred ---------------------------------------------------------CCCCcccccccccEEEEEECCee
Q psy16434 460 ---------------------------------------------------------TPPAASELGYADSVAVDELGDTA 482 (745)
Q Consensus 460 ---------------------------------------------------------~~p~a~~LG~a~~vq~~eiGdts 482 (745)
+++++++||+|+++++.++|+++
T Consensus 287 vekI~~~g~~vvI~~~~I~~~al~~L~~~gI~~v~~v~k~~leria~~tGa~ivs~l~~l~~~~LG~a~~v~~~~ig~d~ 366 (553)
T 3ko1_A 287 VDKILATGANVIICQKGIDEVAQSYLAKKGVLAVRRAKKSDLEKLARATGGRVVSNIDEISEQDLGYASLIEERKVGEDK 366 (553)
T ss_dssp HHHHHTTCCSEEECSSCBCSHHHHHHHHHTCEEECCCCHHHHHHHHTTTTCCEESCGGGCCSSSSEECSEEECCCCSSSC
T ss_pred HHHHHhhcceEEEeccChHHHHHHHHHhcchhhhhhhhhhhHHHHHHhhCCeeecccccCChhhcchHHHHHHhhcCcce
Confidence 67888999999999999999999
Q ss_pred EEEEEecccccceeEEEEcCCchhhHHHHHHHHHHHHHHHHHHHH-----------------------------------
Q psy16434 483 VVVFKLEAAESRIATLVIRGATENYMDDIERAVDDGVNTFKGITK----------------------------------- 527 (745)
Q Consensus 483 vti~~g~~l~~~a~TIIlrG~t~~IldE~eral~DAL~vlk~~~~----------------------------------- 527 (745)
+++|.|+.. +.++||++||+|+.+++|.+|+++||+++++++++
T Consensus 367 ~~~i~g~~~-~~~~TI~lrG~te~~l~E~er~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~ 445 (553)
T 3ko1_A 367 MVFVEGAKN-PKSISILIRGGLERLVDETERALRDALGTVADVIKDGRAIAGGGAVEIEIAKKLRKYAPQVGGKEQLAVE 445 (553)
T ss_dssp CEEEESCSS-SSCEEEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHH
T ss_pred EEEeccCCC-CceEEEeeeccHHHHHHHHHHHHHHHHHHHHHHhhcCceecCCceeEeHHHHHHHHhccccCChhHhHHH
Confidence 999999987 89999999999999999999999999999999987
Q ss_pred -------HHHHHHHhhccchhhHHHHHHHHHhhcCC-ccceeeecCCCcceeecccccccccccchhhHhhhhhhcchhh
Q psy16434 528 -------VFVKTLAENTGVKSNEVISKLYSAHNEGK-KTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAANTI 599 (745)
Q Consensus 528 -------~IPr~LaeNAGld~~~vlsKL~~~h~~g~-~~~GIDl~~~~ikI~dm~g~gI~Ds~lVkG~vL~~A~e~a~mi 599 (745)
.+|++|++|||+|+.+++++|++.|.++. .++|||+.++ ++.||...|||||+.|+.++|+.|++.+.|+
T Consensus 446 ~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g--~~~d~~~~gI~dp~~vk~~al~~A~e~a~~i 523 (553)
T 3ko1_A 446 AYANALESLVSILIENAGFDPIDLLMKLRSTHENENNKWYGIDLYAG--QPVDMWQKGVIEPALVKMNAIKAATEAATLV 523 (553)
T ss_dssp HHHHHHHHHHHHHHHHHTSCHHHHHHHHHHTTCSGGGTTEEEETTTT--EEEESGGGSCEEETTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHhhCcCCceEeEEeecC--CchHHHHhCccchhhhhhhhhhhcchhheEE
Confidence 57899999999999999999999987765 6799999999 9999999999999999999999999999999
Q ss_pred cccccceee
Q psy16434 600 LQQTKAKIA 608 (745)
Q Consensus 600 l~IDn~kIl 608 (745)
+++|++...
T Consensus 524 L~iD~ii~~ 532 (553)
T 3ko1_A 524 LRIDDVVSA 532 (553)
T ss_dssp HHEEEECCC
T ss_pred EehHHHHHh
Confidence 999988654
No 2
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=9.6e-72 Score=639.12 Aligned_cols=385 Identities=31% Similarity=0.507 Sum_probs=362.7
Q ss_pred eecccccccccChHHHHHHHHHHHHHHHhhccccccccccceeeecCCCCeEEecCHHHHHhhccccChhhHHHHHHHhh
Q psy16434 173 AIFQYYDKHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHPAAKLIILGSQM 252 (745)
Q Consensus 173 ~~~~~~~~~~~g~~~a~~~ni~~~~~la~~v~tsLGP~G~~KmIv~~~g~i~ITnDG~tIlk~l~~~hP~akll~~~s~~ 252 (745)
.+|+++.++.+| .+++.+|+.||.+|+++|+|||||+||||||+++.|+++|||||+||||+|+++||+|||++++|++
T Consensus 6 ~~l~~~~~~~~g-~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~ 84 (543)
T 3ruv_A 6 GVLPENMKRYMG-RDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVEHPAAKMLIEVAKT 84 (543)
T ss_dssp CSSCSSEEEEET-HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTSCEEEECCHHHHHHHSCCCCHHHHHHHHHHHH
T ss_pred eeecCCcchhcc-HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHHHH
Confidence 678999999999 5899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhchhcCccchhhhHhhhhhhhhHHHHHhhhchhhHHHhhhccccccccCCCCchhHHHHHHHHHHHHHhhhCCCCHHHH
Q psy16434 253 QEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTPSEI 332 (745)
Q Consensus 253 qd~~~GDGt~~~~~~~~~~l~~~~~~~~~~~~~~~~l~v~~~~~q~~~~GDgTTsvVvLa~eLL~~a~~li~~gihP~~I 332 (745)
||+++||| |||+|+||++||+++.+++++|+||+.|
T Consensus 85 qd~e~GDG--------------------------------------------TTtvvVLA~~Ll~~a~~ll~~GihP~~I 120 (543)
T 3ruv_A 85 QEKEVGDG--------------------------------------------TTTAVVVAGELLRKAEELLDQNVHPTIV 120 (543)
T ss_dssp HHHHTSSC--------------------------------------------HHHHHHHHHHHHHHHHHHHTTTCCHHHH
T ss_pred HHhhhCCC--------------------------------------------cccHHHHHHHHHHHHHHHHhCCCCHHHH
Confidence 99999999 9999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccccccccCcccccccceeeeccccccCCC-hhhHHHHHHHHHHhhcCCCCCCCCccceEEEE
Q psy16434 333 VNGYKLALAKTLEILPTLTCFEVKDVRNVENVTKGIKSAIMSKQYGN-EDFLTDLITKACVSILPDGSSSFNVDNVRITK 411 (745)
Q Consensus 333 ~~g~~~a~~~~l~~L~~~s~~~~~~~~~~~~L~~va~tsl~sK~~~~-~~~ls~LivdAv~~v~~~~~~~~dl~~I~I~k 411 (745)
++||++|++.+++.|++++++. +..+++.|.++|+|+++||+.+. +++|++|+++|+.+++++ ++.+|+++|+|++
T Consensus 121 ~~G~~~A~~~a~~~L~~~s~~v--~~~d~~~L~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~-~g~~dl~~I~V~k 197 (543)
T 3ruv_A 121 VKGYQAAAQKAQELLKTIACEV--GAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDD-EGKVDKDLIKIEK 197 (543)
T ss_dssp HHHHHHHHHHHHHHHHHHCEEC--CTTCHHHHHHHHHHHHHHTCGGGCCHHHHHHHHHHHHHHCCT-TSCCCGGGEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhhCCC--CCCCHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHhhcc-CCCcccceEEEEE
Confidence 9999999999999999998773 33478899999999999999974 799999999999999875 3569999999999
Q ss_pred ccCCCcccceeEeeEEEeecccC--CceeeeCceEEEeccCCCccccccC------------------------------
Q psy16434 412 ILGSGLFNSEIVQGMVFKRSVEG--DITKQTKAKIAVYTCPVDIATTETK------------------------------ 459 (745)
Q Consensus 412 i~Ggs~~dS~lv~G~~l~~~~~~--~~~~i~nakIlil~~~Le~~k~e~k------------------------------ 459 (745)
+.|+++.||++++||+|++++.| +|++++||||++++++|++.+++.+
T Consensus 198 ~~Gg~~~ds~lv~G~v~dk~~~~~~m~~~~~n~kIll~~~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~ 277 (543)
T 3ruv_A 198 KSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIK 277 (543)
T ss_dssp EECSCGGGCEEESSEEESCCCSCTTSCSEEEEEEEEEESSCBSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCcccceeecceEEeccccCccccccccCcEEEEEcccccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999986 5999999999999999999876532
Q ss_pred ----------------------------------------------------CCCCcccccccccEEEEEECCeeEEEEE
Q psy16434 460 ----------------------------------------------------TPPAASELGYADSVAVDELGDTAVVVFK 487 (745)
Q Consensus 460 ----------------------------------------------------~~p~a~~LG~a~~vq~~eiGdtsvti~~ 487 (745)
+++++++||+|+++++.++|++++++|.
T Consensus 278 ~~g~~vvi~~~~I~~~al~~L~~~gI~~v~~v~k~~le~ia~~tGa~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~ 357 (543)
T 3ruv_A 278 ASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKSDMEKLAKATGANVIAAIAALSAQDLGDAGLVEERKISGDSMIFVE 357 (543)
T ss_dssp HHTCSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHCCCEESCGGGCCGGGCEEEEEEEEEEETTEEEEEEE
T ss_pred HcCCCEEEEeCCccHHHHHHHHHcCcEEEeeCCHHHHHHHHHHhCCceecccccCCHHHCCcccEEEEEEeCCceEEEEE
Confidence 6788899999999999999999999999
Q ss_pred ecccccceeEEEEcCCchhhHHHHHHHHHHHHHHHHHHHH----------------------------------------
Q psy16434 488 LEAAESRIATLVIRGATENYMDDIERAVDDGVNTFKGITK---------------------------------------- 527 (745)
Q Consensus 488 g~~l~~~a~TIIlrG~t~~IldE~eral~DAL~vlk~~~~---------------------------------------- 527 (745)
|+.. +.++||++||+|+.+++|.+|+++||+++++++++
T Consensus 358 g~~~-~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~A 436 (543)
T 3ruv_A 358 ECKH-PKAVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADA 436 (543)
T ss_dssp CCSS-CSSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTCCTTHHHHHHHHHHH
T ss_pred CCCC-CceeEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHH
Confidence 9987 88999999999999999999999999999999987
Q ss_pred --HHHHHHHhhccchhhHHHHHHHHHhh-cCCccceeeecCCCcceeecccccccccccchhhHhhhhhhcchhhccccc
Q psy16434 528 --VFVKTLAENTGVKSNEVISKLYSAHN-EGKKTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAANTILQQTK 604 (745)
Q Consensus 528 --~IPr~LaeNAGld~~~vlsKL~~~h~-~g~~~~GIDl~~~~ikI~dm~g~gI~Ds~lVkG~vL~~A~e~a~mil~IDn 604 (745)
.+|++|++|||+|+.+++++|++.|. ++..++|||+.++ .+.||...|||||+.|+.++|+.|++.+.|++++|+
T Consensus 437 Le~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g--~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ 514 (543)
T 3ruv_A 437 LEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTG--AVEDMCENGVVEPLRVKTQAIQSAAESTEMLLRIDD 514 (543)
T ss_dssp HTHHHHHHHHHTTCCHHHHHHHHHHHHTTTCCTTEEECTTTC--SEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCceeeeeCCCC--ccccHHHcCCEecHHHHHHHHHHHHHHHHHHHhHHh
Confidence 67999999999999999999999987 6667899999999 999999999999999999999999999999999999
Q ss_pred ceee
Q psy16434 605 AKIA 608 (745)
Q Consensus 605 ~kIl 608 (745)
+...
T Consensus 515 ii~~ 518 (543)
T 3ruv_A 515 VIAA 518 (543)
T ss_dssp EEEE
T ss_pred heec
Confidence 8764
No 3
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.3e-71 Score=634.45 Aligned_cols=384 Identities=60% Similarity=0.966 Sum_probs=359.7
Q ss_pred cccccccChHHHHHHHHHHHHHHHhhccccccccccceeeecCCCCeEEecCHHHHHhhccccChhhHHHHHHHhhhhch
Q psy16434 177 YYDKHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHPAAKLIILGSQMQEEE 256 (745)
Q Consensus 177 ~~~~~~~g~~~a~~~ni~~~~~la~~v~tsLGP~G~~KmIv~~~g~i~ITnDG~tIlk~l~~~hP~akll~~~s~~qd~~ 256 (745)
+|+++++|.++++.+|+.||.+|+++|+|||||+||||||+++.|+++|||||+||||+|+++||+|||++++|++||++
T Consensus 1 ~~~~~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~~ 80 (512)
T 3iyg_Q 1 EGAKHFSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAATILRELEVQHPAAKMIVMASHMQEQE 80 (512)
T ss_pred CCccccCCHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHHHHHHHHHHHHhhhh
Confidence 46788899779999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCccchhhhHhhhhhhhhHHHHHhhhchhhHHHhhhccccccccCCCCchhHHHHHHHHHHHHHhhhCCCCHHHHHHHH
Q psy16434 257 MGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTPSEIVNGY 336 (745)
Q Consensus 257 ~GDGt~~~~~~~~~~l~~~~~~~~~~~~~~~~l~v~~~~~q~~~~GDgTTsvVvLa~eLL~~a~~li~~gihP~~I~~g~ 336 (745)
+||| |||+++||++||+++.+++++|+||+.|++||
T Consensus 81 ~GDG--------------------------------------------TTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~ 116 (512)
T 3iyg_Q 81 VGDG--------------------------------------------TNFVLVFAGALLELAEELLRLGLSVSEVIEGY 116 (512)
T ss_pred hCCC--------------------------------------------hhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 9999 99999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccccccccccCcccccccceeeeccccccCCChhhHHHHHHHHHHhhcCCCCCCCCccceEEEEccCCC
Q psy16434 337 KLALAKTLEILPTLTCFEVKDVRNVENVTKGIKSAIMSKQYGNEDFLTDLITKACVSILPDGSSSFNVDNVRITKILGSG 416 (745)
Q Consensus 337 ~~a~~~~l~~L~~~s~~~~~~~~~~~~L~~va~tsl~sK~~~~~~~ls~LivdAv~~v~~~~~~~~dl~~I~I~ki~Ggs 416 (745)
++|++.+++.|+++++....+..+++.|.++|+|+++||+.+++++|++|+++|+.+++++ ++.+|+++|+|.|+.|++
T Consensus 117 ~~A~~~a~~~L~~~~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~livdAv~~V~~~-~~~i~v~~I~i~k~~Ggs 195 (512)
T 3iyg_Q 117 EIACKKAHEILPDLVCCSAKNLRDVDEVSSLLHTSVMSKQYGNEVFLAKLIAQACVSIFPD-SGHFNVDNIRVCKILGSG 195 (512)
T ss_pred HHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHhCCCCccchHHHHHHHHHHHHHHhcc-CCcccHhHeeEeeccCCC
Confidence 9999999999999865333445678899999999999999888899999999999999875 357899999999999999
Q ss_pred cccceeEeeEEEeecccCCceeeeCceEEEeccCCCccccccC-------------------------------------
Q psy16434 417 LFNSEIVQGMVFKRSVEGDITKQTKAKIAVYTCPVDIATTETK------------------------------------- 459 (745)
Q Consensus 417 ~~dS~lv~G~~l~~~~~~~~~~i~nakIlil~~~Le~~k~e~k------------------------------------- 459 (745)
+.||++++||+|++++.++|+.++|++|+++++||++.+++.+
T Consensus 196 ~~ds~lv~G~~~dk~~~~~~~~~~n~kI~ll~~~le~~~~e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vv 275 (512)
T 3iyg_Q 196 VHSSSVLHGMVFKKETEGDVTSVKDAKIAVYSCPFDGMITETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVV 275 (512)
T ss_pred cccceEEeeEEEecCcCCCCcccccCceEEEecccccccccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Confidence 9999999999999999999999999999999999988766532
Q ss_pred ---------------------------------------------CCCCcccccccccEEEEEECCeeEEEEEecccccc
Q psy16434 460 ---------------------------------------------TPPAASELGYADSVAVDELGDTAVVVFKLEAAESR 494 (745)
Q Consensus 460 ---------------------------------------------~~p~a~~LG~a~~vq~~eiGdtsvti~~g~~l~~~ 494 (745)
+++++++||+|+++++.++|++++++|.+|+++++
T Consensus 276 i~~~~I~~la~~~l~k~~I~av~~~~~~dle~ia~~tGa~iis~l~~~~~~~LG~a~~v~~~~~g~~~~~~~~~~~~~~~ 355 (512)
T 3iyg_Q 276 VTGGRVADMALHYANKYNIMLVRLNSKWDLRRLCKTVGATALPRLNPPVLEEMGHCDSVYLSEVGDTQVVVFKHEKEDGA 355 (512)
T ss_pred EECCCccHHHHHHHHHCCeEEEEeCCHHHHHHHHHHhCCEEecccccCCHHHCCcccEEEEEEeCCeEEEEEEcccCCCc
Confidence 67888999999999999999999999999976578
Q ss_pred eeEEEEcCCchhhHHHHHHHHHHHHHHHHHHHH------------------------------------------HHHHH
Q psy16434 495 IATLVIRGATENYMDDIERAVDDGVNTFKGITK------------------------------------------VFVKT 532 (745)
Q Consensus 495 a~TIIlrG~t~~IldE~eral~DAL~vlk~~~~------------------------------------------~IPr~ 532 (745)
++||++||+|+.+++|.+|+++||+++++++++ .+|++
T Consensus 356 ~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~ 435 (512)
T 3iyg_Q 356 ISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRA 435 (512)
T ss_pred eEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999987 57899
Q ss_pred HHhhccchhhHHHHHHHHHhhcCCccceeeec--CCCcceeecccccccccccchhhHhhhhhhcchhhccccccee
Q psy16434 533 LAENTGVKSNEVISKLYSAHNEGKKTYGFDIN--GENSSVIDAAEAGILDLYLTKMWALKYATSAANTILQQTKAKI 607 (745)
Q Consensus 533 LaeNAGld~~~vlsKL~~~h~~g~~~~GIDl~--~~~ikI~dm~g~gI~Ds~lVkG~vL~~A~e~a~mil~IDn~kI 607 (745)
|++|||+|+.+++++|++.|.++..++|||+. ++ .+.||...|||||+.|+..+++.|++.+.|++++|++..
T Consensus 436 La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~~~g--~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~ 510 (512)
T 3iyg_Q 436 LAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEVP--AVKDMLEAGVLDTYLGKYWAIKLATNAAVTVLRVDQIIM 510 (512)
T ss_pred HHHhcCCCHHHHHHHHHHHHhcCCCcEEEecCCCCC--cccchHhccCeEcHHHHHHHHHHHHHHHHHHHhHhHhee
Confidence 99999999999999999999888788999998 45 899999999999999999999999999999999998764
No 4
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.3e-71 Score=634.49 Aligned_cols=380 Identities=25% Similarity=0.416 Sum_probs=354.2
Q ss_pred ccccccccChHHHHHHHHHHHHHHHhhccccccccccceeeecCCCCeEEecCHHHHHhhccccChhhHHHHHHHhhhhc
Q psy16434 176 QYYDKHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHPAAKLIILGSQMQEE 255 (745)
Q Consensus 176 ~~~~~~~~g~~~a~~~ni~~~~~la~~v~tsLGP~G~~KmIv~~~g~i~ITnDG~tIlk~l~~~hP~akll~~~s~~qd~ 255 (745)
++|+++++| .+++.+||.||.+|+++|+|||||+||||||+++.|+++|||||+||||+|+++||+|||++++|++||+
T Consensus 1 ~~~~~~~~g-~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~ 79 (515)
T 3iyg_H 1 KEGTDSSQG-IPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDA 79 (515)
T ss_pred CCCccccCc-HHHHHHHHHHHHHHHHHHhhCcCCCCCeEEEECCCCCeEEECCHHHHHHHccCCCHHHHHHHHHHHHhhc
Confidence 467788889 5899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCccchhhhHhhhhhhhhHHHHHhhhchhhHHHhhhccccccccCCCCchhHHHHHHHHHHHHHhhhCCCCHHHHHHH
Q psy16434 256 EMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTPSEIVNG 335 (745)
Q Consensus 256 ~~GDGt~~~~~~~~~~l~~~~~~~~~~~~~~~~l~v~~~~~q~~~~GDgTTsvVvLa~eLL~~a~~li~~gihP~~I~~g 335 (745)
++||| |||+|+||++||++|.+++++|+||+.|++|
T Consensus 80 ~~GDG--------------------------------------------TTtvvVLA~~Ll~~a~~li~~GihP~~I~~G 115 (515)
T 3iyg_H 80 EVGDG--------------------------------------------TTSVTLLAAEFLKQVKPYVEEGLHPQIIIRA 115 (515)
T ss_pred eeCcc--------------------------------------------hhhHHHHHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 99999 9999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccccccccCcc--cccccceeeeccccccCC-ChhhHHHHHHHHHHhhcCCCCCCCCccceEEEEc
Q psy16434 336 YKLALAKTLEILPTLTCFEVKDVRN--VENVTKGIKSAIMSKQYG-NEDFLTDLITKACVSILPDGSSSFNVDNVRITKI 412 (745)
Q Consensus 336 ~~~a~~~~l~~L~~~s~~~~~~~~~--~~~L~~va~tsl~sK~~~-~~~~ls~LivdAv~~v~~~~~~~~dl~~I~I~ki 412 (745)
|++|++.+++.|++++++...+..+ ++.|.++|+|+++||+++ ++++|++|+++|+.+++. .+|++.|+|+++
T Consensus 116 ~~~A~~~a~~~L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK~~s~~~~~i~~livdAv~~V~~----~~d~~~I~V~k~ 191 (515)
T 3iyg_H 116 FRTATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLDD----LLQLKMIGIKKV 191 (515)
T ss_pred HHHHHHHHHHHHHHhhcccccCChHHHHHHHHHHHHHHhcCCcccccHHHHHHHHHHHHHHhcc----cCCcceEEEEec
Confidence 9999999999999998874321111 677899999999999997 579999999999999963 588889999999
Q ss_pred cCCCcccceeEeeEEEeecccCC-----ceeeeCceEEEeccCCCccccccC----------------------------
Q psy16434 413 LGSGLFNSEIVQGMVFKRSVEGD-----ITKQTKAKIAVYTCPVDIATTETK---------------------------- 459 (745)
Q Consensus 413 ~Ggs~~dS~lv~G~~l~~~~~~~-----~~~i~nakIlil~~~Le~~k~e~k---------------------------- 459 (745)
.|+++.||++++||+|++++.|+ |++++||||++++++||+.+++.+
T Consensus 192 ~Gg~~~ds~lv~G~~~dk~~~~p~~~~~p~~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~~~~E~~~l~~~le~ 271 (515)
T 3iyg_H 192 QGGALEESQLVAGVAFKKTFSYAGFEMQPKKYHNPMIALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEK 271 (515)
T ss_pred CCCCccceEEEeeeEEecCccCcccccCCccccccEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999864 889999999999999999887532
Q ss_pred ------------------------------------------------------CCCCcccccccccEEEEEECCeeEEE
Q psy16434 460 ------------------------------------------------------TPPAASELGYADSVAVDELGDTAVVV 485 (745)
Q Consensus 460 ------------------------------------------------------~~p~a~~LG~a~~vq~~eiGdtsvti 485 (745)
++++++.||+|+++++.++|++++++
T Consensus 272 I~~~g~~vvi~~~~I~dla~~~l~~~gI~~v~~~~k~~leria~~tGa~ii~~l~~~~~~~LG~a~~v~~~~ig~~~~~~ 351 (515)
T 3iyg_H 272 IHHSGAKVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALSSDVLGRCQVFEETQIGGERYNF 351 (515)
T ss_pred HHhcCCcEEEECCcccHHHHHHHHHcCCcccccccHHHHHHHHHHhCCEEeeccccCCHHHCCcccEEEEEEEcCeEEEE
Confidence 77888999999999999999999999
Q ss_pred EEecccccceeEEEEcCCchhhHHHHHHHHHHHHHHHHHHHH--------------------------------------
Q psy16434 486 FKLEAAESRIATLVIRGATENYMDDIERAVDDGVNTFKGITK-------------------------------------- 527 (745)
Q Consensus 486 ~~g~~l~~~a~TIIlrG~t~~IldE~eral~DAL~vlk~~~~-------------------------------------- 527 (745)
|.|+.. ++++||++||+|+.+++|.+|+++||+++++++++
T Consensus 352 i~g~~~-~~~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a 430 (515)
T 3iyg_H 352 FTGCPK-AKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYA 430 (515)
T ss_pred EecCCC-CceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCeecCCcHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Confidence 999987 88999999999999999999999999999999987
Q ss_pred ----HHHHHHHhhccchhhHHHHHHHHHhhcCCccceeeecCCCcceeecccccccccccchhhHhhhhhhcchhhcccc
Q psy16434 528 ----VFVKTLAENTGVKSNEVISKLYSAHNEGKKTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAANTILQQT 603 (745)
Q Consensus 528 ----~IPr~LaeNAGld~~~vlsKL~~~h~~g~~~~GIDl~~~~ikI~dm~g~gI~Ds~lVkG~vL~~A~e~a~mil~ID 603 (745)
.+|++||+|||+|+.+++++|++.|.++..++|||+.++ ++.||...|||||+.|+.++++.|++.+.|++++|
T Consensus 431 ~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g--~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~iD 508 (515)
T 3iyg_H 431 KALEIIPRQLCDNAGFDATNILNKLRARHAQGGMWYGVDINTE--DIADNFEAFVWEPAMVRINALTAASEAACLIVSVD 508 (515)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccCCCeeEeCCCC--cccccHhccCEECHHHHHHHHHHHHHHHHHHHHHH
Confidence 578999999999999999999999988777899999999 99999999999999999999999999999999999
Q ss_pred ccee
Q psy16434 604 KAKI 607 (745)
Q Consensus 604 n~kI 607 (745)
++..
T Consensus 509 ~ii~ 512 (515)
T 3iyg_H 509 ETIK 512 (515)
T ss_pred HHhc
Confidence 8754
No 5
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.5e-71 Score=632.96 Aligned_cols=379 Identities=30% Similarity=0.471 Sum_probs=351.0
Q ss_pred cccccChHHHHHHHHHHHHHHHhhccccccccccceeeecCCCCeEEecCHHHHHhhccccChhhHHHHHHHhhhhchhc
Q psy16434 179 DKHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHPAAKLIILGSQMQEEEMG 258 (745)
Q Consensus 179 ~~~~~g~~~a~~~ni~~~~~la~~v~tsLGP~G~~KmIv~~~g~i~ITnDG~tIlk~l~~~hP~akll~~~s~~qd~~~G 258 (745)
.++.+| .+++.+|+.||.+|+++|+|||||+||+|||+++.|+++|||||+||||+|+++||+|||++++|++||+++|
T Consensus 3 ~~~~~g-~~a~~~ni~a~~~la~~v~ttlGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~akll~~~a~~qd~e~G 81 (529)
T 3iyg_A 3 GDRSTG-EAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVG 81 (529)
T ss_pred cchhch-HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCChHHHHHHHHHHHhhhhhC
Confidence 456678 5899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccchhhhHhhhhhhhhHHHHHhhhchhhHHHhhhccccccccCCCCchhHHHHHHHHHHHHHhhhCCCCHHHHHHHHHH
Q psy16434 259 DGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTPSEIVNGYKL 338 (745)
Q Consensus 259 DGt~~~~~~~~~~l~~~~~~~~~~~~~~~~l~v~~~~~q~~~~GDgTTsvVvLa~eLL~~a~~li~~gihP~~I~~g~~~ 338 (745)
|| |||+|+||++||++|.+++++|+||+.|++||++
T Consensus 82 DG--------------------------------------------TTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~ 117 (529)
T 3iyg_A 82 DG--------------------------------------------TTSVVIIAAELLKNADELVKQKIHPTSVISGYRL 117 (529)
T ss_pred CC--------------------------------------------hhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 99 9999999999999999999999999999999999
Q ss_pred HHHHHHHhccc-ccccccccCcccccccceeeeccccccCCC-hhhHHHHHHHHHHhhcC---CCCCCCCccceEEEEcc
Q psy16434 339 ALAKTLEILPT-LTCFEVKDVRNVENVTKGIKSAIMSKQYGN-EDFLTDLITKACVSILP---DGSSSFNVDNVRITKIL 413 (745)
Q Consensus 339 a~~~~l~~L~~-~s~~~~~~~~~~~~L~~va~tsl~sK~~~~-~~~ls~LivdAv~~v~~---~~~~~~dl~~I~I~ki~ 413 (745)
|++.+++.|++ ++++ ++..+++.|.++|+|+++||+.++ +++|++|+++|+.++++ +....+|+++|+|+++.
T Consensus 118 A~~~a~~~L~~~~s~~--v~~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~ 195 (529)
T 3iyg_A 118 ACKEAVRYISENLIIN--TDELGRDCLINAAKTSMSSKVIGINGDFFANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAH 195 (529)
T ss_pred HHHHHHHHHHHhcccC--CCCCCHHHHHHHHHHHhccCcccccHHHHHHHHHHHHHHHhhhccCCCcccccceEEEEEec
Confidence 99999999998 8876 333467899999999999999985 79999999999999973 33346888899999999
Q ss_pred CCCcccceeEeeEEEeecccC--CceeeeCceEEEeccCCCccccccC--------------------------------
Q psy16434 414 GSGLFNSEIVQGMVFKRSVEG--DITKQTKAKIAVYTCPVDIATTETK-------------------------------- 459 (745)
Q Consensus 414 Ggs~~dS~lv~G~~l~~~~~~--~~~~i~nakIlil~~~Le~~k~e~k-------------------------------- 459 (745)
|+++.||++++||+|++++.+ +|++++||||++++++|++.+++.+
T Consensus 196 G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIlll~~~le~~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~ 275 (529)
T 3iyg_A 196 GRSQMESMLINGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILAT 275 (529)
T ss_pred CCCccceEEEeeeEEecCcccccCCcccCCceEEEecCCcccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999976 5999999999999999999877532
Q ss_pred --------------------------------------------------CC------CCcccccccccEEEEEECCeeE
Q psy16434 460 --------------------------------------------------TP------PAASELGYADSVAVDELGDTAV 483 (745)
Q Consensus 460 --------------------------------------------------~~------p~a~~LG~a~~vq~~eiGdtsv 483 (745)
++ +.++.||+|+.+++.++|++++
T Consensus 276 g~nvvi~~~~I~d~al~~L~~~gI~av~~v~k~~leria~~tGa~iv~~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~ 355 (529)
T 3iyg_A 276 GANVILTTGGIDDMCLKYFVEAGAMAVRRVLKRDLKRIAKASGATVLSTLANLEGEETFEASMLGQAEEVVQERICDDEL 355 (529)
T ss_pred CCCEEEECCCCCHHHHHHHHHcCCceeccCCHHHHHHHHHHhCCeeecchhcccchhccChhhCccceEEEEEEeCCceE
Confidence 22 3467899999999999999999
Q ss_pred EEEEecccccceeEEEEcCCchhhHHHHHHHHHHHHHHHHHHHH------------------------------------
Q psy16434 484 VVFKLEAAESRIATLVIRGATENYMDDIERAVDDGVNTFKGITK------------------------------------ 527 (745)
Q Consensus 484 ti~~g~~l~~~a~TIIlrG~t~~IldE~eral~DAL~vlk~~~~------------------------------------ 527 (745)
++|.|+.. ++++||++||+++.+++|.+|+++||+++++++++
T Consensus 356 ~~~~g~~~-~~~~TI~lrG~t~~~l~E~er~l~Dal~v~r~~v~~~~iVpGGGa~E~~ls~~L~~~~~~~~g~eq~~i~~ 434 (529)
T 3iyg_A 356 ILIKNTKA-RTSASVILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAE 434 (529)
T ss_pred EEEEcCCC-CceEEEEECCchHHHHHHHHHHHHHHHHHHHHHhhCCeEEeCCcHHHHHHHHHHHHHhhhcCChHHHHHHH
Confidence 99999987 88999999999999999999999999999999987
Q ss_pred ------HHHHHHHhhccchhhHHHHHHHHHhhcCC--------ccceeeecCCCcceeecccccccccccchhhHhhhhh
Q psy16434 528 ------VFVKTLAENTGVKSNEVISKLYSAHNEGK--------KTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYAT 593 (745)
Q Consensus 528 ------~IPr~LaeNAGld~~~vlsKL~~~h~~g~--------~~~GIDl~~~~ikI~dm~g~gI~Ds~lVkG~vL~~A~ 593 (745)
.||++||+|||+|+.+++++|++.|..+. .++|+|+.++ .+.||...|||||+.||.++++.|+
T Consensus 435 fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g--~~~d~~~~gV~dp~~vk~~al~~A~ 512 (529)
T 3iyg_A 435 FARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLVNG--KPRDNKQAGVFEPTIVKVKSLKFAT 512 (529)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccccccccccCceeeeeCCCC--CccChhhccCEecHHHHHHHHHHHH
Confidence 67999999999999999999999997765 5799999999 9999999999999999999999999
Q ss_pred hcchhhccccccee
Q psy16434 594 SAANTILQQTKAKI 607 (745)
Q Consensus 594 e~a~mil~IDn~kI 607 (745)
+.+.|+++||++..
T Consensus 513 e~a~~iL~iD~ii~ 526 (529)
T 3iyg_A 513 EAAITILRIDDLIK 526 (529)
T ss_pred HHHHHHHhHHhhhc
Confidence 99999999998754
No 6
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=5.5e-71 Score=633.48 Aligned_cols=388 Identities=32% Similarity=0.493 Sum_probs=362.0
Q ss_pred ceeecccccccccChHHHHHHHHHHHHHHHhhccccccccccceeeecCCCCeEEecCHHHHHhhccccChhhHHHHHHH
Q psy16434 171 PAAIFQYYDKHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHPAAKLIILGS 250 (745)
Q Consensus 171 ~~~~~~~~~~~~~g~~~a~~~ni~~~~~la~~v~tsLGP~G~~KmIv~~~g~i~ITnDG~tIlk~l~~~hP~akll~~~s 250 (745)
|..+++++.+..+| ++++.+|++||.+|+++|+|||||+||||||+++.|+++|||||+||||+|+++||+|||++++|
T Consensus 8 ~~~~l~~~~~~~~g-~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a 86 (548)
T 1q3q_A 8 PVVILPEGTQRYVG-RDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDCATILDKIDLQHPAAKMMVEVA 86 (548)
T ss_dssp -CCCSCTTCEEEEH-HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTCCEEEESCHHHHHHHSCCCSHHHHHHHHHH
T ss_pred CcccccCCcceech-HHHHHHHHHHHHHHHHHHHhccCCCCceEEEEcCCCCeEEECCHHHHHHHhhccchHHHHHHHHH
Confidence 55578889888888 69999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhchhcCccchhhhHhhhhhhhhHHHHHhhhchhhHHHhhhccccccccCCCCchhHHHHHHHHHHHHHhhhCCCCHH
Q psy16434 251 QMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTPS 330 (745)
Q Consensus 251 ~~qd~~~GDGt~~~~~~~~~~l~~~~~~~~~~~~~~~~l~v~~~~~q~~~~GDgTTsvVvLa~eLL~~a~~li~~gihP~ 330 (745)
++||+++||| |||+|+||++||+++.+++++|+||+
T Consensus 87 ~~qd~e~GDG--------------------------------------------TTtvvvLA~~LL~~a~~ll~~GihP~ 122 (548)
T 1q3q_A 87 KTQDKEAGDG--------------------------------------------TTTAVVIAGELLRKAEELLDQNIHPS 122 (548)
T ss_dssp HHHHHHTSSC--------------------------------------------HHHHHHHHHHHHHHHHHHHHTTCCHH
T ss_pred HhcCCEECCC--------------------------------------------hhHHHHHHHHHHHHHHHHHHCCCCHH
Confidence 9999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcccccccccccCcccccccceeeeccccccCCC-hhhHHHHHHHHHHhhcCCCC--CCCCccce
Q psy16434 331 EIVNGYKLALAKTLEILPTLTCFEVKDVRNVENVTKGIKSAIMSKQYGN-EDFLTDLITKACVSILPDGS--SSFNVDNV 407 (745)
Q Consensus 331 ~I~~g~~~a~~~~l~~L~~~s~~~~~~~~~~~~L~~va~tsl~sK~~~~-~~~ls~LivdAv~~v~~~~~--~~~dl~~I 407 (745)
.|++||++|++.+++.|++++++. +..+++.|.++|+|+++||+.++ +++|++|+++|+.+++++.. ..+|++.|
T Consensus 123 ~I~~G~~~A~~~a~~~L~~~s~~v--~~~d~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~V~~~~~g~~~~d~~~I 200 (548)
T 1q3q_A 123 IITKGYALAAEKAQEILDEIAIRV--DPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNI 200 (548)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCEEC--CTTCHHHHHHHHHHHSCSSTTGGGHHHHHHHHHHHHHHHCEESSSSEECCGGGE
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCC--CCCCHHHHHHHHHHHhhccccccchHHHHHHHHHHHHHhccccCCCccccCCeE
Confidence 999999999999999999998763 33468899999999999999985 79999999999999986522 35888999
Q ss_pred EEEEccCCCcccceeEeeEEEeecccC--CceeeeCceEEEeccCCCccccccC--------------------------
Q psy16434 408 RITKILGSGLFNSEIVQGMVFKRSVEG--DITKQTKAKIAVYTCPVDIATTETK-------------------------- 459 (745)
Q Consensus 408 ~I~ki~Ggs~~dS~lv~G~~l~~~~~~--~~~~i~nakIlil~~~Le~~k~e~k-------------------------- 459 (745)
+|+++.|++++||++++||+|++++.+ +|++++||||++++++||+.+++.+
T Consensus 201 ~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~l 280 (548)
T 1q3q_A 201 KFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMV 280 (548)
T ss_dssp EEEEEEBSCGGGCEEESSEEESCCCSSTTSCSEESSEEEEEECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCccceEEEeeEEEeccCCCCCCcceecCCEEEEEecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999986 4999999999999999999887632
Q ss_pred --------------------------------------------------------CCCCcccccccccEEEEEECCeeE
Q psy16434 460 --------------------------------------------------------TPPAASELGYADSVAVDELGDTAV 483 (745)
Q Consensus 460 --------------------------------------------------------~~p~a~~LG~a~~vq~~eiGdtsv 483 (745)
+++++++||+|+++++.++|++++
T Consensus 281 e~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~tGa~ii~~l~~~~~~~LG~a~~v~~~~ig~~~~ 360 (548)
T 1q3q_A 281 DHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENM 360 (548)
T ss_dssp HHHHHHTCCEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHCCCCBSSGGGCCGGGCEEESEEEEEEETTEEE
T ss_pred HHHHHhCcCEEEEcCCcCHHHHHHHHHCCcEEEccCCHHHHHHHHHHhCCeEecccccCCHHHCCCceEEEEEEecCceE
Confidence 667888999999999999999999
Q ss_pred EEEEecccccceeEEEEcCCchhhHHHHHHHHHHHHHHHHHHHH------------------------------------
Q psy16434 484 VVFKLEAAESRIATLVIRGATENYMDDIERAVDDGVNTFKGITK------------------------------------ 527 (745)
Q Consensus 484 ti~~g~~l~~~a~TIIlrG~t~~IldE~eral~DAL~vlk~~~~------------------------------------ 527 (745)
++|+|+.. ++++||++||+|+.+++|.+|+++||+++++++++
T Consensus 361 ~~~~g~~~-~~~~TI~lrG~te~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~ 439 (548)
T 1q3q_A 361 IFVEGCKN-PKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIEN 439 (548)
T ss_dssp EEEECCSS-CSSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHSCEEEECTTHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred EEEecCCC-CCeEEEEECCCChHHHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHHHHHHHHHHHhhhcCCcHHHHHHH
Confidence 99999986 89999999999999999999999999999999987
Q ss_pred ------HHHHHHHhhccchhhHHHHHHHHHhhcCCccceeeecCCCcceeecccccccccccchhhHhhhhhhcchhhcc
Q psy16434 528 ------VFVKTLAENTGVKSNEVISKLYSAHNEGKKTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAANTILQ 601 (745)
Q Consensus 528 ------~IPr~LaeNAGld~~~vlsKL~~~h~~g~~~~GIDl~~~~ikI~dm~g~gI~Ds~lVkG~vL~~A~e~a~mil~ 601 (745)
.+|++|++|||+|+.+++++|++.|.++..++|||+.++ .+.||...+||||+.|+..+++.|++.+.|+++
T Consensus 440 ~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g--~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~ 517 (548)
T 1q3q_A 440 FADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEG--KPADMLEKGIIEPLRVKKQAIKSASEAAIMILR 517 (548)
T ss_dssp HHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTEEEETTTT--EEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceeCCCC--CccchhhcCCEecHHHHHHHHHHHHHHHHHHHH
Confidence 679999999999999999999999876666899999999 999999999999999999999999999999999
Q ss_pred cccceee
Q psy16434 602 QTKAKIA 608 (745)
Q Consensus 602 IDn~kIl 608 (745)
+|++...
T Consensus 518 iD~iI~~ 524 (548)
T 1q3q_A 518 IDDVIAA 524 (548)
T ss_dssp CCEEEEC
T ss_pred HHHHHhc
Confidence 9986553
No 7
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=4e-71 Score=634.27 Aligned_cols=388 Identities=26% Similarity=0.442 Sum_probs=350.8
Q ss_pred ceeecccccccccChHHHHHHHHHHHHHHHhhccccccccccceeeecCCCCeEEecCHHHHHhhccccChhhHHHHHHH
Q psy16434 171 PAAIFQYYDKHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHPAAKLIILGS 250 (745)
Q Consensus 171 ~~~~~~~~~~~~~g~~~a~~~ni~~~~~la~~v~tsLGP~G~~KmIv~~~g~i~ITnDG~tIlk~l~~~hP~akll~~~s 250 (745)
|..+++++.+..+| ++++.+|+.||.+|+++|+|||||+||||||+++.|+++|||||+||||+|+++||+|||++++|
T Consensus 6 ~~~~l~~~~~~~~g-~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~Akll~e~a 84 (543)
T 1a6d_B 6 PIFILKEGTKRESG-KDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITNDGVTILKEMDVEHPAAKMMVEVS 84 (543)
T ss_dssp ---------------CHHHHHHHHHHHHHHHHHHTTSSTTCCCEEEECTTCCEEEECCHHHHHHHSCCCSHHHHHHHHHH
T ss_pred chhhcCCcchhhhh-HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHhhccchHHHHHHHHH
Confidence 55678889888899 58999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhchhcCccchhhhHhhhhhhhhHHHHHhhhchhhHHHhhhccccccccCCCCchhHHHHHHHHHHHHHhhhCCCCHH
Q psy16434 251 QMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTPS 330 (745)
Q Consensus 251 ~~qd~~~GDGt~~~~~~~~~~l~~~~~~~~~~~~~~~~l~v~~~~~q~~~~GDgTTsvVvLa~eLL~~a~~li~~gihP~ 330 (745)
++||+++||| |||+++||++||+++.+++++|+||+
T Consensus 85 ~~qd~e~GDG--------------------------------------------TTtvvvLA~~LL~~a~~ll~~GihP~ 120 (543)
T 1a6d_B 85 KTQDSFVGDG--------------------------------------------TTTAVIIAGGLLQQAQGLINQNVHPT 120 (543)
T ss_dssp TCTTCCCTTH--------------------------------------------HHHHHHHHHHHHHHHHHHHHTTCCHH
T ss_pred HhcCCEECCC--------------------------------------------hhHHHHHHHHHHHHHHHHHHCCCCHH
Confidence 9999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcccccccccccCcccccccceeeeccccccCCC-hhhHHHHHHHHHHhhcCCCCC--CCCccce
Q psy16434 331 EIVNGYKLALAKTLEILPTLTCFEVKDVRNVENVTKGIKSAIMSKQYGN-EDFLTDLITKACVSILPDGSS--SFNVDNV 407 (745)
Q Consensus 331 ~I~~g~~~a~~~~l~~L~~~s~~~~~~~~~~~~L~~va~tsl~sK~~~~-~~~ls~LivdAv~~v~~~~~~--~~dl~~I 407 (745)
.|++||++|++.+++.|++++++. +..+++.|.++|+|+++||+.++ +++|++|+++|+.+++++.++ .+|+++|
T Consensus 121 ~I~~G~~~A~~~a~~~L~~~a~~v--~~~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I 198 (543)
T 1a6d_B 121 VISEGYRMASEEAKRVIDEISTKI--GADEKALLLKMAQTSLNSKSASVAKDKLAEISYEAVKSVAELRDGKYYVDFDNI 198 (543)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCEEC--CTTHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHHHEEECSSSEEECGGGE
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCC--CCCCHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhcccccCCcccccceE
Confidence 999999999999999999998763 33467899999999999999985 799999999999999865222 5888999
Q ss_pred EEEEccCCCcccceeEeeEEEeecccC--CceeeeCceEEEeccCCCccccccC--------------------------
Q psy16434 408 RITKILGSGLFNSEIVQGMVFKRSVEG--DITKQTKAKIAVYTCPVDIATTETK-------------------------- 459 (745)
Q Consensus 408 ~I~ki~Ggs~~dS~lv~G~~l~~~~~~--~~~~i~nakIlil~~~Le~~k~e~k-------------------------- 459 (745)
+|+++.|++++||++++||+|++++.+ +|++++||||++++++||+.+++.+
T Consensus 199 ~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~l 278 (543)
T 1a6d_B 199 QVVKKQGGAIDDTQLINGIIVDKEKVHPGMPDVVKDAKIALLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMV 278 (543)
T ss_dssp EEEEEESSCGGGCEEESEEEESCCCSSTTSCSEEEEEEEEEESSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCccceeEEccEEEecCCCCCCCcceecCCeEEEEecccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999986 4999999999999999999876531
Q ss_pred --------------------------------------------------------CCCCcccccccccEEEEEECCeeE
Q psy16434 460 --------------------------------------------------------TPPAASELGYADSVAVDELGDTAV 483 (745)
Q Consensus 460 --------------------------------------------------------~~p~a~~LG~a~~vq~~eiGdtsv 483 (745)
++++++.||+|+++++.++|++++
T Consensus 279 e~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~v~k~~le~ia~~tGa~iis~l~~l~~~~LG~a~~v~~~~ig~~~~ 358 (543)
T 1a6d_B 279 DKIKSVGANVVITQKGIDDMAQHYLSRAGIYAVRRVKKSDMDKLAKATGASIVSTIDEISSSDLGTAERVEQVKVGEDYM 358 (543)
T ss_dssp HHHHHTTCCEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHTCCEESCGGGCCGGGCEEEEEEEEEEETTEEE
T ss_pred HHHHHcCCCEEEECCCcCHHHHHHHHHCCeeEeccCCHHHHHHHHHHhCCceecccccCCHHHCCCceEEEEEEecCceE
Confidence 678889999999999999999999
Q ss_pred EEEEecccccceeEEEEcCCchhhHHHHHHHHHHHHHHHHHHHH------------------------------------
Q psy16434 484 VVFKLEAAESRIATLVIRGATENYMDDIERAVDDGVNTFKGITK------------------------------------ 527 (745)
Q Consensus 484 ti~~g~~l~~~a~TIIlrG~t~~IldE~eral~DAL~vlk~~~~------------------------------------ 527 (745)
++|+|+.. ++++||++||+|+.+++|.+|+++||+++++++++
T Consensus 359 ~~~~g~~~-~~~~TI~lrG~t~~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~ 437 (543)
T 1a6d_B 359 TFVTGCKN-PKAVSILVRGETEHVVDEMERSITDSLHVVASALEDGAYAAGGGATAAEIAFRLRSYAQKIGGRQQLAIEK 437 (543)
T ss_dssp EEEEEESS-SSCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHTCSSHHHHHHH
T ss_pred EEEecCCC-CceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHCCCccCCccHHHHHHHHHHHHHhhhcCChHHHHHHH
Confidence 99999987 89999999999999999999999999999999887
Q ss_pred ------HHHHHHHhhccchhhHHHHHHHHHhhcCCccceeeecCCCcceeecccccccccccchhhHhhhhhhcchhhcc
Q psy16434 528 ------VFVKTLAENTGVKSNEVISKLYSAHNEGKKTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAANTILQ 601 (745)
Q Consensus 528 ------~IPr~LaeNAGld~~~vlsKL~~~h~~g~~~~GIDl~~~~ikI~dm~g~gI~Ds~lVkG~vL~~A~e~a~mil~ 601 (745)
.+|++|++|||+|+.+++++|++.|.++..++|||+.++ .+.||...||+||+.|+..+++.|++.+.|+++
T Consensus 438 ~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g--~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~ 515 (543)
T 1a6d_B 438 FADAIEEIPRALAENAGLDPIDILLKLRAEHAKGNKTYGINVFTG--EIEDMVKNGVIEPIRVGKQAIESATEAAIMILR 515 (543)
T ss_dssp HHHHHTHHHHHHHHHHTCCHHHHHHHHHHHHHTTCTTEEEETTTT--EEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCChHHHHHHHHHHHhCCCCCeeEeCCCC--cccchhhcCceecHHHHHHHHHHHHHHHHHHHH
Confidence 679999999999999999999999987777899999999 999999999999999999999999999999999
Q ss_pred cccceee
Q psy16434 602 QTKAKIA 608 (745)
Q Consensus 602 IDn~kIl 608 (745)
+|++...
T Consensus 516 id~iI~~ 522 (543)
T 1a6d_B 516 IDDVIAT 522 (543)
T ss_dssp EEEEEC-
T ss_pred HHHHHhc
Confidence 9997654
No 8
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.2e-70 Score=626.76 Aligned_cols=379 Identities=25% Similarity=0.421 Sum_probs=350.8
Q ss_pred cccccChHHHHHHHHHHHHHHHhhccccccccccceeeecCCCCeEEecCHHHHHhhccccChhhHHHHHHHhhhhchhc
Q psy16434 179 DKHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHPAAKLIILGSQMQEEEMG 258 (745)
Q Consensus 179 ~~~~~g~~~a~~~ni~~~~~la~~v~tsLGP~G~~KmIv~~~g~i~ITnDG~tIlk~l~~~hP~akll~~~s~~qd~~~G 258 (745)
+++++| .+++.+|+.||.+|+++|||||||+||||||+++.|+++|||||+||||+|+++||+|||++++|++||+++|
T Consensus 2 ~~~~~g-~~~~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~G 80 (515)
T 3iyg_G 2 TKRESG-RKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVG 80 (515)
T ss_pred Ccccch-HHHHHHHHHHHHHHHHHHhcCcCCCCCeEEEECCCCCeEEECCHHHHHHhcccCCHHHHHHHHHHHHhhhhhC
Confidence 456778 5899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccchhhhHhhhhhhhhHHHHHhhhchhhHHHhhhccccccccCCCCchhHHHHHHHHHHHHHhhhCCCCHHHHHHHHHH
Q psy16434 259 DGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTPSEIVNGYKL 338 (745)
Q Consensus 259 DGt~~~~~~~~~~l~~~~~~~~~~~~~~~~l~v~~~~~q~~~~GDgTTsvVvLa~eLL~~a~~li~~gihP~~I~~g~~~ 338 (745)
|| |||+|+||++||++|.+++++|+||+.|++||++
T Consensus 81 DG--------------------------------------------TTtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~ 116 (515)
T 3iyg_G 81 DG--------------------------------------------TTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRK 116 (515)
T ss_pred CC--------------------------------------------hhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 99 9999999999999999999999999999999999
Q ss_pred HHHHHHHhcccccccccccCcccccccceeeeccccccCCC-hhhHHHHHHHHHHhhcCCCCC--CCCccc-eEEEEccC
Q psy16434 339 ALAKTLEILPTLTCFEVKDVRNVENVTKGIKSAIMSKQYGN-EDFLTDLITKACVSILPDGSS--SFNVDN-VRITKILG 414 (745)
Q Consensus 339 a~~~~l~~L~~~s~~~~~~~~~~~~L~~va~tsl~sK~~~~-~~~ls~LivdAv~~v~~~~~~--~~dl~~-I~I~ki~G 414 (745)
|++.+++.|++++++ .+..+++.|.++|+|+++||.++. .+++++++++|+..+.++.++ .+|+++ |+|+++.|
T Consensus 117 A~~~a~~~L~~~s~~--v~~~~~~~l~~va~tsl~sK~i~~~~~~~~~i~vdav~~V~~~~~~~~~~dl~~~I~I~ki~G 194 (515)
T 3iyg_G 117 ALDDMISTLKKISIP--VDTSNRDTMLNIINSSITTKVISRWSSLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPG 194 (515)
T ss_pred HHHHHHHHHHHhhcc--cCCCCHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHhcccccCCCcccchhheeEEEEecC
Confidence 999999999999877 344567899999999999999974 788999999999998743222 366654 99999999
Q ss_pred CCcccceeEeeEEEeecccC--CceeeeCceEEEeccCCCccccccC---------------------------------
Q psy16434 415 SGLFNSEIVQGMVFKRSVEG--DITKQTKAKIAVYTCPVDIATTETK--------------------------------- 459 (745)
Q Consensus 415 gs~~dS~lv~G~~l~~~~~~--~~~~i~nakIlil~~~Le~~k~e~k--------------------------------- 459 (745)
|+++||++++||+|++++.| ||++++||||++++++||+.+++.+
T Consensus 195 gs~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g 274 (515)
T 3iyg_G 195 GIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLK 274 (515)
T ss_pred CCcccceEEeeEEEeCCCCCCCCcceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999987 5999999999999999999887642
Q ss_pred -------------------------------------------------CCCCcccccc-cccEEEEEECCeeEEEEEec
Q psy16434 460 -------------------------------------------------TPPAASELGY-ADSVAVDELGDTAVVVFKLE 489 (745)
Q Consensus 460 -------------------------------------------------~~p~a~~LG~-a~~vq~~eiGdtsvti~~g~ 489 (745)
++++++.||+ |+.+++.++|++++++|.||
T Consensus 275 ~~vIi~~~~I~~~al~~L~~~~I~av~~~~k~~leria~~tGa~ii~~l~~l~~~~LG~~a~~v~~~~~g~~~~~~i~g~ 354 (515)
T 3iyg_G 275 PDVVITEKGISDLAQHYLMRANITAIRRVRKTDNNRIARACGARIVSRPEELREEDVGTGAGLLEIKKIGDEYFTFITEC 354 (515)
T ss_pred CCEEEECCccCHHHHHHHHHCCceeeccCCHHHHHHHHHHhCCeeeccccccChhhcCCcccEEEEEEECCceEEEEeCC
Confidence 6788899999 99999999999999999999
Q ss_pred ccccceeEEEEcCCchhhHHHHHHHHHHHHHHHHHHHH------------------------------------------
Q psy16434 490 AAESRIATLVIRGATENYMDDIERAVDDGVNTFKGITK------------------------------------------ 527 (745)
Q Consensus 490 ~l~~~a~TIIlrG~t~~IldE~eral~DAL~vlk~~~~------------------------------------------ 527 (745)
.. ++++||++||+|+.+++|.+|+++||+++++++++
T Consensus 355 ~~-~~~~TIllrG~t~~~l~E~er~i~Dal~~~r~~~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~eq~~i~~~a~Ale 433 (515)
T 3iyg_G 355 KD-PKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALE 433 (515)
T ss_pred CC-CCeEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhCCcEEeCCCHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHH
Confidence 87 89999999999999999999999999999999985
Q ss_pred HHHHHHHhhccchhhHHHHHHHHHhhcC-CccceeeecCCCcceeecccccccccccchhhHhhhhhhcchhhcccccce
Q psy16434 528 VFVKTLAENTGVKSNEVISKLYSAHNEG-KKTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAANTILQQTKAK 606 (745)
Q Consensus 528 ~IPr~LaeNAGld~~~vlsKL~~~h~~g-~~~~GIDl~~~~ikI~dm~g~gI~Ds~lVkG~vL~~A~e~a~mil~IDn~k 606 (745)
.+|++||+|||+|+.+++++|++.|..+ ...+|+|+.++ .+.||...|||||+.|+.++++.|++.+.|++++|++.
T Consensus 434 ~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g--~~~d~~~~gi~dp~~vk~~al~~A~e~a~~iL~iD~ii 511 (515)
T 3iyg_G 434 VIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETG--TLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIV 511 (515)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCceeeeCCCC--cccccHHcCCEEcHHHHHHHHHHHHHHHHHHHHHHhee
Confidence 6799999999999999999999998754 45789999999 99999999999999999999999999999999999875
Q ss_pred e
Q psy16434 607 I 607 (745)
Q Consensus 607 I 607 (745)
.
T Consensus 512 ~ 512 (515)
T 3iyg_G 512 S 512 (515)
T ss_pred e
Confidence 4
No 9
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=1.8e-70 Score=625.03 Aligned_cols=378 Identities=26% Similarity=0.400 Sum_probs=353.2
Q ss_pred ccccccChHHHHHHHHHHHHHHHhhccccccccccceeeecCC--CCeEEecCHHHHHhhccccChhhHHHHHHHhhhhc
Q psy16434 178 YDKHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHI--DKLFVTNDAATIIRELEIEHPAAKLIILGSQMQEE 255 (745)
Q Consensus 178 ~~~~~~g~~~a~~~ni~~~~~la~~v~tsLGP~G~~KmIv~~~--g~i~ITnDG~tIlk~l~~~hP~akll~~~s~~qd~ 255 (745)
++++.+| .+++.+|+.||..|+++|+|||||+||||||+++. |+++|||||+||||+|+++||+|||++++|++||+
T Consensus 2 ~~~~~~g-~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~~G~~~iTnDG~tIlk~i~v~hp~Akll~e~a~~qd~ 80 (513)
T 3iyg_B 2 GADEERA-ETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDD 80 (513)
T ss_pred Ccchhhh-HHHHHHHHHHHHHHHHHHHhccCCCCCeEEeecCCCCCCeEEECCHHHHHHHccccCHHHHHHHHHHHHhhh
Confidence 4566778 58999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred hhcCccchhhhHhhhhhhhhHHHHHhhhchhhHHHhhhccccccccCCCCchhHHHHHHHHHHHHHhhhCCCCHHHHHHH
Q psy16434 256 EMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTPSEIVNG 335 (745)
Q Consensus 256 ~~GDGt~~~~~~~~~~l~~~~~~~~~~~~~~~~l~v~~~~~q~~~~GDgTTsvVvLa~eLL~~a~~li~~gihP~~I~~g 335 (745)
++||| |||+++||++||+++.+++++|+||+.|++|
T Consensus 81 e~GDG--------------------------------------------TTtvvVLA~~LL~~a~~li~~GihP~~I~~G 116 (513)
T 3iyg_B 81 EVGDG--------------------------------------------TTSVTVLAAELLREAESLIAKKIHPQTIIAG 116 (513)
T ss_pred hhCCC--------------------------------------------hhhhHHHHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 99999 9999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccccccccC-cccccccceeeeccccccCC-ChhhHHHHHHHHHHhhcCCCCCCCCccceEEEEcc
Q psy16434 336 YKLALAKTLEILPTLTCFEVKDV-RNVENVTKGIKSAIMSKQYG-NEDFLTDLITKACVSILPDGSSSFNVDNVRITKIL 413 (745)
Q Consensus 336 ~~~a~~~~l~~L~~~s~~~~~~~-~~~~~L~~va~tsl~sK~~~-~~~~ls~LivdAv~~v~~~~~~~~dl~~I~I~ki~ 413 (745)
|++|++.+++.|++++++...+. .+++.|.++|+|+++||+.+ ++++|++|+++|+.+++++ +|++.|+|+++.
T Consensus 117 ~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~va~tslssK~~~~~~~~i~~livdAv~~V~~~----~d~~~I~V~ki~ 192 (513)
T 3iyg_B 117 WREATKAARQALLNSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLKGS----GNLEAIHVIKKL 192 (513)
T ss_pred HHHHHHHHHHHHHHhCcCcccccccCHHHHHHHHHhhhcccccccchHHHHHHHHHHHHHhccc----CCcCeEEEEEeC
Confidence 99999999999999998743221 25788999999999999997 4789999999999999853 788999999999
Q ss_pred CCCcccceeEeeEEEeecccC-CceeeeCceEEEeccCCCccccc-cC--------------------------------
Q psy16434 414 GSGLFNSEIVQGMVFKRSVEG-DITKQTKAKIAVYTCPVDIATTE-TK-------------------------------- 459 (745)
Q Consensus 414 Ggs~~dS~lv~G~~l~~~~~~-~~~~i~nakIlil~~~Le~~k~e-~k-------------------------------- 459 (745)
|+++.||++++||+|++++.+ ||++++||||++++++||+.+++ .+
T Consensus 193 gg~~~ds~lv~G~v~dk~~~~~m~~~~en~kIll~~~~Le~~k~e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~ 272 (513)
T 3iyg_B 193 GGSLADSYLDEGFLLDKKIGVNQPKRIENAKILIANTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKH 272 (513)
T ss_pred CCCccceeEEeeEEEeccccCCCceeecCceEEEEcCCcccccccccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999965 69999999999999999998866 21
Q ss_pred --------------------------------------------------CCCCcccccccccEEEEEECCeeEEEEEec
Q psy16434 460 --------------------------------------------------TPPAASELGYADSVAVDELGDTAVVVFKLE 489 (745)
Q Consensus 460 --------------------------------------------------~~p~a~~LG~a~~vq~~eiGdtsvti~~g~ 489 (745)
++++++.||+|+++++..+|++++++|.|+
T Consensus 273 g~~vvi~~~~I~~~al~~L~~~~I~av~~~~~~~le~ia~~tGa~ii~~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~ 352 (513)
T 3iyg_B 273 GINCFINRQLIYNYPEQLFGAAGVMAIEHADFVGVERLALVTGGEIASTFDHPELVKLGSCKLIEEVMIGEDKLIHFSGV 352 (513)
T ss_pred CCCEEEEcCCccHHHHHHHHHcCceEEecCCHHHHHHHHHHhCCEEecccccCCHhHCCcccEEEEEEECCeEEEEEecC
Confidence 678889999999999999999999999999
Q ss_pred ccccceeEEEEcCCchhhHHHHHHHHHHHHHHHHHHHH------------------------------------------
Q psy16434 490 AAESRIATLVIRGATENYMDDIERAVDDGVNTFKGITK------------------------------------------ 527 (745)
Q Consensus 490 ~l~~~a~TIIlrG~t~~IldE~eral~DAL~vlk~~~~------------------------------------------ 527 (745)
.. ++++||++||+|+.+++|.+|+++||+++++++++
T Consensus 353 ~~-~~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe 431 (513)
T 3iyg_B 353 AL-GEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLASRTPGKEAVAMESYAKALR 431 (513)
T ss_pred CC-CceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCCcEEeCCcHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHH
Confidence 86 78999999999999999999999999999999987
Q ss_pred HHHHHHHhhccchhhHHHHHHHHHhhcCCccceeeecCCCcceeecccccccccccchhhHhhhhhhcchhhccccccee
Q psy16434 528 VFVKTLAENTGVKSNEVISKLYSAHNEGKKTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAANTILQQTKAKI 607 (745)
Q Consensus 528 ~IPr~LaeNAGld~~~vlsKL~~~h~~g~~~~GIDl~~~~ikI~dm~g~gI~Ds~lVkG~vL~~A~e~a~mil~IDn~kI 607 (745)
.+|++|++|||+|+.+++++|++.|.++..++|||+.++ .+.||...|||||+.|+.++++.|++.+.|++++|++..
T Consensus 432 ~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g--~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~ 509 (513)
T 3iyg_B 432 MLPTIIADNAGYDSADLVAQLRAAHSEGKTTAGLDMKEG--TIGDMSVLGITESFQVKRQVLLSAAEAAEVILRVDNIIK 509 (513)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeecCCCC--CccchHhccCEecHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 578999999999999999999999988877899999999 999999999999999999999999999999999998754
No 10
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=1.1e-70 Score=630.59 Aligned_cols=386 Identities=29% Similarity=0.479 Sum_probs=353.3
Q ss_pred ceeecccccccccChHHHHHHHHHHHHHHHhhccccccccccceeeecCCCCeEEecCHHHHHhhccccChhhHHHHHHH
Q psy16434 171 PAAIFQYYDKHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHPAAKLIILGS 250 (745)
Q Consensus 171 ~~~~~~~~~~~~~g~~~a~~~ni~~~~~la~~v~tsLGP~G~~KmIv~~~g~i~ITnDG~tIlk~l~~~hP~akll~~~s 250 (745)
|..+++++.+..+| ++++.+|+.||.+|+++|+|||||+||||||+++.|+++|||||+||||+|+++||+|||++++|
T Consensus 7 ~~~~l~~~~~~~~g-~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a 85 (545)
T 1a6d_A 7 PILVLKEGTQREQG-KNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATILKEMDVEHPTAKMIVEVS 85 (545)
T ss_dssp ----------CEEH-HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECSSSCEEEECCHHHHHHHSCCCSHHHHHHHGGG
T ss_pred cccccCCcchhhch-HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCcHHHHHHhhhccchHHHHHHHHH
Confidence 45578888888888 69999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhchhcCccchhhhHhhhhhhhhHHHHHhhhchhhHHHhhhccccccccCCCCchhHHHHHHHHHHHHHhhhCCCCHH
Q psy16434 251 QMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTPS 330 (745)
Q Consensus 251 ~~qd~~~GDGt~~~~~~~~~~l~~~~~~~~~~~~~~~~l~v~~~~~q~~~~GDgTTsvVvLa~eLL~~a~~li~~gihP~ 330 (745)
++||+++||| |||+|+||++||+++.+++++|+||+
T Consensus 86 ~~qd~e~GDG--------------------------------------------TTtvvvLA~~LL~~a~~ll~~GihP~ 121 (545)
T 1a6d_A 86 KAQDTAVGDG--------------------------------------------TTTAVVLSGELLKQAETLLDQGVHPT 121 (545)
T ss_dssp GCTTTCSTTH--------------------------------------------HHHHHHHHHHHHHHHHHHHHHTCCHH
T ss_pred HhcCCEECCC--------------------------------------------hhHHHHHHHHHHHHHHHHHHCCCCHH
Confidence 9999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcccccccccccCcccccccceeeeccccccCCC-hhhHHHHHHHHHHhhcCCCC--CCCCccce
Q psy16434 331 EIVNGYKLALAKTLEILPTLTCFEVKDVRNVENVTKGIKSAIMSKQYGN-EDFLTDLITKACVSILPDGS--SSFNVDNV 407 (745)
Q Consensus 331 ~I~~g~~~a~~~~l~~L~~~s~~~~~~~~~~~~L~~va~tsl~sK~~~~-~~~ls~LivdAv~~v~~~~~--~~~dl~~I 407 (745)
.|++||++|++.+++.|++++++ + .+++.|.++|+|+++||+.++ +++|++|+++|+.+++++.. ..+|++.|
T Consensus 122 ~I~~G~~~A~~~a~~~L~~~s~~---~-~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I 197 (545)
T 1a6d_A 122 VISNGYRLAVNEARKIIDEIAEK---S-TDDATLRKIALTALSGKNTGLSNDFLADLVVKAVNAVAEVRDGKTIVDTANI 197 (545)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCEE---C-CCHHHHHHHHHHHTTTSSCCSTHHHHHHHHHHHHHHHCEESSSSEECCGGGE
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC---C-CCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHhcccCCCcccccceE
Confidence 99999999999999999999876 2 467899999999999999985 79999999999999986522 35888999
Q ss_pred EEEEccCCCcccceeEeeEEEeecccC--CceeeeCceEEEeccCCCccccccC--------------------------
Q psy16434 408 RITKILGSGLFNSEIVQGMVFKRSVEG--DITKQTKAKIAVYTCPVDIATTETK-------------------------- 459 (745)
Q Consensus 408 ~I~ki~Ggs~~dS~lv~G~~l~~~~~~--~~~~i~nakIlil~~~Le~~k~e~k-------------------------- 459 (745)
+|+++.|++++||++++||+|++++.| +|++++||||++++++||+.+++.+
T Consensus 198 ~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~l 277 (545)
T 1a6d_A 198 KVDKKNGGSVNDTQFISGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMV 277 (545)
T ss_dssp EEEECCCSCSTTCEEESEEEESCCCSCTTSCSEEEEEEEEEECSCBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCceeeEEEeeEEEeccCCCCCCcceecCCEEEEEecCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999986 4999999999999999999887632
Q ss_pred --------------------------------------------------------CCCCcccccccccEEEEEECCeeE
Q psy16434 460 --------------------------------------------------------TPPAASELGYADSVAVDELGDTAV 483 (745)
Q Consensus 460 --------------------------------------------------------~~p~a~~LG~a~~vq~~eiGdtsv 483 (745)
+++++++||+|+++++.++|++++
T Consensus 278 e~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~tGa~iis~l~~~~~~~LG~a~~v~~~~ig~~~~ 357 (545)
T 1a6d_A 278 EKIKKSGANVVLCQKGIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDDLTPSVLGEAETVEERKIGDDRM 357 (545)
T ss_dssp HHHHHTTCCEEEESSCBCHHHHHHHHHHTCEEECSCCHHHHHHHHHHHCCCEESSGGGCCGGGCEEEEEEEEEEETTEEE
T ss_pred HHHHHhCCCEEEECCCccHHHHHHHHHCCeeEeccCCHHHHHHHHHHhCCeeecccccCCHHHCCCceEEEEEEecCceE
Confidence 677889999999999999999999
Q ss_pred EEEEecccccceeEEEEcCCchhhHHHHHHHHHHHHHHHHHHHH------------------------------------
Q psy16434 484 VVFKLEAAESRIATLVIRGATENYMDDIERAVDDGVNTFKGITK------------------------------------ 527 (745)
Q Consensus 484 ti~~g~~l~~~a~TIIlrG~t~~IldE~eral~DAL~vlk~~~~------------------------------------ 527 (745)
++|.|+.. ++++||++||+|+.+++|.+|+++||+++++++++
T Consensus 358 ~~~~g~~~-~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a~~~g~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~ 436 (545)
T 1a6d_A 358 TFVMGCKN-PKAVSILIRGGTDHVVSEVERALNDAIRVVAITKEDGKFLWGGGAVEAELAMRLAKYANSVGGREQLAIEA 436 (545)
T ss_dssp EEEEEESC-SSCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred EEEecCCC-CceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCcCHHHHHHHHHHHHHhhccCccHHHHHHH
Confidence 99999986 89999999999999999999999999999999987
Q ss_pred ------HHHHHHHhhccchhhHHHHHHHHHhhcCCccceeeecCCCcceeecccccccccccchhhHhhhhhhcchhhcc
Q psy16434 528 ------VFVKTLAENTGVKSNEVISKLYSAHNEGKKTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAANTILQ 601 (745)
Q Consensus 528 ------~IPr~LaeNAGld~~~vlsKL~~~h~~g~~~~GIDl~~~~ikI~dm~g~gI~Ds~lVkG~vL~~A~e~a~mil~ 601 (745)
.+|++|++|||+|+.+++++|++.|.++..++|||+.++ .+.||...+||||+.|+..+++.|++.+.|+++
T Consensus 437 ~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g--~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~ 514 (545)
T 1a6d_A 437 FAKALEIIPRTLAENAGIDPINTLIKLKADDEKGRISVGVDLDNN--GVGDMKAKGVVDPLRVKTHALESAVEVATMILR 514 (545)
T ss_dssp HHHHHTHHHHHHHHHHTSCHHHHHHHHHHHHHTTCTTEEEETTTT--EEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceecccC--ccccchhcCccccHHHHHHHHHHHHHHHHHHHH
Confidence 679999999999999999999999987777899999999 999999999999999999999999999999999
Q ss_pred cccceee
Q psy16434 602 QTKAKIA 608 (745)
Q Consensus 602 IDn~kIl 608 (745)
+|++...
T Consensus 515 id~iI~~ 521 (545)
T 1a6d_A 515 IDDVIAS 521 (545)
T ss_dssp CCEEC--
T ss_pred HHHHHhc
Confidence 9986654
No 11
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=6.9e-72 Score=643.06 Aligned_cols=392 Identities=44% Similarity=0.708 Sum_probs=356.0
Q ss_pred eeecccccccccChHHHHHHHHHHHHHHHhhccccccccccceeeecCCCCeEEecCHHHHHhhccccChhhHHHHHHHh
Q psy16434 172 AAIFQYYDKHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHPAAKLIILGSQ 251 (745)
Q Consensus 172 ~~~~~~~~~~~~g~~~a~~~ni~~~~~la~~v~tsLGP~G~~KmIv~~~g~i~ITnDG~tIlk~l~~~hP~akll~~~s~ 251 (745)
..+|++|+++++|.++++.+|+.||.+|+++|+|||||+||||||+++.|+++|||||+||||+|+++||+|||++++|+
T Consensus 11 ~~~l~~~~~~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~Akll~e~a~ 90 (568)
T 3p9d_H 11 AGLFKQGYNSYSNADGQIIKSIAAIRELHQMCLTSMGPCGRNKIIVNHLGKIIITNDAATMLRELDIVHPAVKVLVMATE 90 (568)
T ss_dssp CSSCCSSCCBCCCHHHHHHHHHHHHHHHHHHHHTTSSSSSCEEEEECTTSCEEEESCHHHHTTTCCCCCHHHHHHHHHHH
T ss_pred hhhhhcCccccccHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHHHHHHHHHHH
Confidence 55789999999998889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhchhcCccchhhhHhhhhhhhhHHHHHhhhchhhHHHhhhccccccccCCCCchhHHHHHHHHHHHHHhhhCCCCHHH
Q psy16434 252 MQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTPSE 331 (745)
Q Consensus 252 ~qd~~~GDGt~~~~~~~~~~l~~~~~~~~~~~~~~~~l~v~~~~~q~~~~GDgTTsvVvLa~eLL~~a~~li~~gihP~~ 331 (745)
+||+++||| |||+++||++||+++.+++++|+||+.
T Consensus 91 ~qd~e~GDG--------------------------------------------TTtvvvLa~~Ll~~a~~ll~~GihP~~ 126 (568)
T 3p9d_H 91 QQKIDMGDG--------------------------------------------TNLVMILAGELLNVSEKLISMGLSAVE 126 (568)
T ss_dssp HHHTTSSSC--------------------------------------------HHHHHHHHHHHHHHHHHHHHHTCCHHH
T ss_pred hhhceeCCC--------------------------------------------ceehHHHHHHHHHHHHHHHHCCCCHHH
Confidence 999999999 999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccccccccccCcccccccceeeeccccccCCChhhHHHHHHHHHHhhcCC-----CCCCCCccc
Q psy16434 332 IVNGYKLALAKTLEILPTLTCFEVKDVRNVENVTKGIKSAIMSKQYGNEDFLTDLITKACVSILPD-----GSSSFNVDN 406 (745)
Q Consensus 332 I~~g~~~a~~~~l~~L~~~s~~~~~~~~~~~~L~~va~tsl~sK~~~~~~~ls~LivdAv~~v~~~-----~~~~~dl~~ 406 (745)
|++||++|++.++++|++++++...+..+++.|.++|+|+++||+.+++++|++|+++|+.+++++ ....+|++.
T Consensus 127 I~~G~~~A~~~a~e~L~~~a~~v~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~dl~~ 206 (568)
T 3p9d_H 127 IIQGYNMARKFTLKELDEMVVGEITDKNDKNELLKMIKPVISSKKYGSEDILSELVSEAVSHVLPVAQQAGEIPYFNVDS 206 (568)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCSCCCCCCTTHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHTTSCC---------CCCGGG
T ss_pred HHHHHHHHHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhhccCcchHHHHHHHHHHHHHHHhhccccccCCcccccce
Confidence 999999999999999999988754455678899999999999999987899999999999999874 223588999
Q ss_pred eEEEEccCCCcccceeEeeEEEeecccCCceeee---CceEEEeccCCCccccccC------------------------
Q psy16434 407 VRITKILGSGLFNSEIVQGMVFKRSVEGDITKQT---KAKIAVYTCPVDIATTETK------------------------ 459 (745)
Q Consensus 407 I~I~ki~Ggs~~dS~lv~G~~l~~~~~~~~~~i~---nakIlil~~~Le~~k~e~k------------------------ 459 (745)
|+|+++.|++++||++++||+|++++.++|++++ ||||++++++||+.+++.+
T Consensus 207 I~I~k~~Ggs~~dS~lv~G~v~dk~~~~m~~~i~~~~n~kIlll~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~ 286 (568)
T 3p9d_H 207 IRVVKIMGGSLSNSTVIKGMVFNREPEGHVKSLSEDKKHKVAVFTCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDA 286 (568)
T ss_dssp CEEEEEESSCGGGCEEESSCCBSSCBSSGGGSCCCCSSCEEEEECSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHH
T ss_pred EEEEEccCCCcchheeeccEEEeecccCCcEEEecCCcceEEEEccCccccccccCceEEeCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999 9999999999999887532
Q ss_pred ----------------------------------------------------------CCCCcccccccccEEEEEECCe
Q psy16434 460 ----------------------------------------------------------TPPAASELGYADSVAVDELGDT 481 (745)
Q Consensus 460 ----------------------------------------------------------~~p~a~~LG~a~~vq~~eiGdt 481 (745)
++++++.||+|+.+++.++|++
T Consensus 287 ~v~~I~~~g~~vvi~~~~I~~~al~~L~~~gI~av~~v~~~~leria~~tGa~ivs~l~~l~~~~LG~a~~v~~~~ig~~ 366 (568)
T 3p9d_H 287 MMKEIADMGVECIVAGAGVGELALHYLNRYGILVLKVPSKFELRRLCRVCGATPLPRLGAPTPEELGLVETVKTMEIGGD 366 (568)
T ss_dssp HHHHHHHTTCCEEEECSCCCHHHHHHHHHHTCEEECCCCHHHHHHHHHHHSCCCCSSSSCCCGGGCEECSCCCCCEETTE
T ss_pred HHHHHHhcCCeEEEECCCcChHHHHHHHHCCeEEEecCCHHHHHHHHHHhCCEEEeccccCCHHHCCcceEEEEEEecCc
Confidence 7788899999999999999999
Q ss_pred eEEEEEeccc-ccceeEEEEcCCchhhHHHHHHHHHHHHHHHHHHHH---------------------------------
Q psy16434 482 AVVVFKLEAA-ESRIATLVIRGATENYMDDIERAVDDGVNTFKGITK--------------------------------- 527 (745)
Q Consensus 482 svti~~g~~l-~~~a~TIIlrG~t~~IldE~eral~DAL~vlk~~~~--------------------------------- 527 (745)
++++|+|+.. .++++||++||+|+.+++|.+|+++||+++++++++
T Consensus 367 ~~~~~~g~~~l~~~~~TIllrG~t~~~l~E~er~i~DAL~vvr~av~~~d~~iVpGGGa~E~~ls~~L~~~a~~~~g~eq 446 (568)
T 3p9d_H 367 RVTVFKQEQGEISRTSTIILRGATQNNLDDIERAIDDGVAAVKGLMKPSGGKLLPGAGATEIELISRITKYGERTPGLLQ 446 (568)
T ss_dssp ECBCCCCCSSSCCSSCEEEEEESCHHHHHHHHHHHHHHHHHHHHTTSTTCCCCCCTTTHHHHHHHHHHHHHHHTCCSTHH
T ss_pred eEEEEecCCCCCCCeEEEEECCCcHHHHHHHHHHHHHHHHHHHHHhcccCCeEEeCCcHHHHHHHHHHHHHhccCCcHHH
Confidence 9999999872 388999999999999999999999999999998853
Q ss_pred -----------HHHHHHHhhccchhhHHHHHHHHHhhc--------CCccceeeecCCCcc---eeecccccccccccch
Q psy16434 528 -----------VFVKTLAENTGVKSNEVISKLYSAHNE--------GKKTYGFDINGENSS---VIDAAEAGILDLYLTK 585 (745)
Q Consensus 528 -----------~IPr~LaeNAGld~~~vlsKL~~~h~~--------g~~~~GIDl~~~~ik---I~dm~g~gI~Ds~lVk 585 (745)
.+|++||+|||+|+.+++++|++.|.. +..++|||+.++ . +.||...|||||+.|+
T Consensus 447 ~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g--~~~~~~d~~~~gI~dp~~vk 524 (568)
T 3p9d_H 447 LAIKQFAVAFEVVPRTLAETAGLDVNEVLPNLYAAHNVTEPGAVKTDHLYKGVDIDGE--SDEGVKDIREENIYDMLATK 524 (568)
T ss_dssp HHHHHHHHGGGHHHHHHHHHHTCCHHHHHHHHHHCCCCSSCCCCCCTTSSSCCCHHHH--TCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhcccccccCCCceeEcccCC--CcccccChHHccCEEcHHHH
Confidence 679999999999999999999998865 556799999988 7 9999999999999999
Q ss_pred hhHhhhhhhcchhhcccccceeee
Q psy16434 586 MWALKYATSAANTILQQTKAKIAV 609 (745)
Q Consensus 586 G~vL~~A~e~a~mil~IDn~kIll 609 (745)
..+|+.|++.+.|++++|++....
T Consensus 525 ~~al~~A~e~a~~iL~iD~ii~~~ 548 (568)
T 3p9d_H 525 KFAINVATEAATTVLSIDQIIMAK 548 (568)
T ss_dssp HHHHHCCEECBCCC----------
T ss_pred HHHHHHHHHHHHHHHhHHHHhhcc
Confidence 999999999999999999987643
No 12
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.7e-70 Score=624.20 Aligned_cols=381 Identities=28% Similarity=0.449 Sum_probs=354.2
Q ss_pred cccccChHHHHHHHHHHHHHHHhhccccccccccceeeecCCCCeEEecCHHHHHhhccccChhhHHHHHHHhhhhchhc
Q psy16434 179 DKHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHPAAKLIILGSQMQEEEMG 258 (745)
Q Consensus 179 ~~~~~g~~~a~~~ni~~~~~la~~v~tsLGP~G~~KmIv~~~g~i~ITnDG~tIlk~l~~~hP~akll~~~s~~qd~~~G 258 (745)
.++++| .+++.+|+.||.+|+++|+|||||+||||||+++.|+++|||||+||||+|+++||+|||++++|++||+++|
T Consensus 4 ~~~~~g-~~~~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~~~a~~qd~~~G 82 (518)
T 3iyg_D 4 QDRDKP-AQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAG 82 (518)
T ss_pred ccchhh-HHHHHHHHHHHHHHHHHHHhccCCCCCceeeeCCCCCeEEECCHHHHHHHcccchHHHHHHHHHHHHhhhhhC
Confidence 345677 5899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccchhhhHhhhhhhhhHHHHHhhhchhhHHHhhhccccccccCCCCchhHHHHHHHHHHHHHhhhCCCCHHHHHHHHHH
Q psy16434 259 DGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTPSEIVNGYKL 338 (745)
Q Consensus 259 DGt~~~~~~~~~~l~~~~~~~~~~~~~~~~l~v~~~~~q~~~~GDgTTsvVvLa~eLL~~a~~li~~gihP~~I~~g~~~ 338 (745)
|| |||+++||++||++|.+++++|+||+.|++||++
T Consensus 83 DG--------------------------------------------TTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~ 118 (518)
T 3iyg_D 83 DG--------------------------------------------TTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQK 118 (518)
T ss_pred CC--------------------------------------------ceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 99 9999999999999999999999999999999999
Q ss_pred HHHHHHHhcccccccccccCcccccccceeeeccccccCCC-hhhHHHHHHHHHHhhcCC-CCCCCCccceEEEEccCCC
Q psy16434 339 ALAKTLEILPTLTCFEVKDVRNVENVTKGIKSAIMSKQYGN-EDFLTDLITKACVSILPD-GSSSFNVDNVRITKILGSG 416 (745)
Q Consensus 339 a~~~~l~~L~~~s~~~~~~~~~~~~L~~va~tsl~sK~~~~-~~~ls~LivdAv~~v~~~-~~~~~dl~~I~I~ki~Ggs 416 (745)
|++.+++.|++++++. +..+++.|.++|+||++||+.++ .++|++|+++|+.++++. ..+.+|+++|+|+++.|++
T Consensus 119 A~~~a~~~L~~~s~~v--~~~~~~~l~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~d~~~I~V~k~~Gg~ 196 (518)
T 3iyg_D 119 ALEKGIEILTDMSRPV--ELSDRETLLNSAATSLNSKVVSQYSSLLSPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGT 196 (518)
T ss_pred HHHHHHHHHHHheeeC--CCCChHHHHHHhHhhhccccchhhHHHHHHHHHHHHHHhhccccCCCcccceEEEEEcCCCC
Confidence 9999999999998773 34478899999999999999974 799999999999999852 2467999999999999999
Q ss_pred cccceeEeeEEEeeccc-CCceeeeCceEEEeccCCCccccccC------------------------------------
Q psy16434 417 LFNSEIVQGMVFKRSVE-GDITKQTKAKIAVYTCPVDIATTETK------------------------------------ 459 (745)
Q Consensus 417 ~~dS~lv~G~~l~~~~~-~~~~~i~nakIlil~~~Le~~k~e~k------------------------------------ 459 (745)
+.||++++||+|++++. .+|++++||||++++++||+++.+.+
T Consensus 197 ~~ds~lv~G~~~dk~~~~~mp~~i~n~kIlll~~~Le~~k~~~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~l 276 (518)
T 3iyg_D 197 IDDCELVEGLVLTQKVANSGITRVEKAKIGLIQFCLSAPKTDMDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNV 276 (518)
T ss_pred hhhheEeccEEEecccccCCCccccCceEEEEEeeccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999998 48999999999999999998764310
Q ss_pred ---------------------------------------------------CCCCcccccccccEEEEEECC-eeEEEEE
Q psy16434 460 ---------------------------------------------------TPPAASELGYADSVAVDELGD-TAVVVFK 487 (745)
Q Consensus 460 ---------------------------------------------------~~p~a~~LG~a~~vq~~eiGd-tsvti~~ 487 (745)
++++++.||+|+++++.++|+ +++++|+
T Consensus 277 vi~~k~i~~~~I~~~Al~~L~~~~I~av~~~~~~~le~ia~~tGa~ii~~l~~l~~~~LG~a~~v~~~~~g~~~~~~~~~ 356 (518)
T 3iyg_D 277 LLIQKSILRDALSDLALHFLNKMKIMVVKDIEREDIEFICKTIGTKPVAHVDQFTADMLGSAELAEEVSLNGSGKLIKIT 356 (518)
T ss_pred EEEeccccccCcCHHHHHHHHHcCcEEEecCCHHHHHHHHHHhCCEEecccccCCHHHCCcCcEEEEEEeCCCceEEEEE
Confidence 677889999999999999999 7999999
Q ss_pred ecccccceeEEEEcCCchhhHHHHHHHHHHHHHHHHHHHH----------------------------------------
Q psy16434 488 LEAAESRIATLVIRGATENYMDDIERAVDDGVNTFKGITK---------------------------------------- 527 (745)
Q Consensus 488 g~~l~~~a~TIIlrG~t~~IldE~eral~DAL~vlk~~~~---------------------------------------- 527 (745)
|++.+++++||++||+|+.+++|.+|+++||+++++++++
T Consensus 357 g~~~~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~A 436 (518)
T 3iyg_D 357 GCASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCIRAFADA 436 (518)
T ss_pred CCCCCCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEeecCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHH
Confidence 9986578999999999999999999999999999999987
Q ss_pred --HHHHHHHhhccchhhHHHHHHHHHhhcCCccceeeecCCCcceeecccccccccccchhhHhhhhhhcchhhcccccc
Q psy16434 528 --VFVKTLAENTGVKSNEVISKLYSAHNEGKKTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAANTILQQTKA 605 (745)
Q Consensus 528 --~IPr~LaeNAGld~~~vlsKL~~~h~~g~~~~GIDl~~~~ikI~dm~g~gI~Ds~lVkG~vL~~A~e~a~mil~IDn~ 605 (745)
.+|++|++|||+|+.+++++|++.|..+..++|||+.++ .+.||...|||||+.|+..+++.|++.+.|++++|++
T Consensus 437 Le~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g--~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~i 514 (518)
T 3iyg_D 437 MEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKG--GISNILEELVVQPLLVSVSALTLATETVRSILKIDDV 514 (518)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHhccCCceeEeCCCC--cccchhhccCEEcHHHHHHHHHHHHHHHHHHHhhcce
Confidence 578999999999999999999999988777899999999 9999999999999999999999999999999999998
Q ss_pred eee
Q psy16434 606 KIA 608 (745)
Q Consensus 606 kIl 608 (745)
..+
T Consensus 515 i~~ 517 (518)
T 3iyg_D 515 VNT 517 (518)
T ss_pred Eec
Confidence 653
No 13
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=1.4e-71 Score=638.44 Aligned_cols=385 Identities=26% Similarity=0.401 Sum_probs=352.9
Q ss_pred ceeecccccccccChHHHHHHHHHHHHHHHhhccccccccccceeeecCCCCeEEecCHHHHHhhccccChhhHHHHHHH
Q psy16434 171 PAAIFQYYDKHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHPAAKLIILGS 250 (745)
Q Consensus 171 ~~~~~~~~~~~~~g~~~a~~~ni~~~~~la~~v~tsLGP~G~~KmIv~~~g~i~ITnDG~tIlk~l~~~hP~akll~~~s 250 (745)
|..+|++++++.+| .+++.+|+.||.+|+++|+|||||+||||||+++.|+++|||||+||||+|+++||+|||++++|
T Consensus 9 ~~~~l~~~~~~~~g-~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~Akll~e~a 87 (550)
T 3p9d_G 9 TIVVLKEGTDASQG-KGQIISNINACVAVQEALKPTLGPLGSDILIVTSNQKTTISNDGATILKLLDVVHPAAKTLVDIS 87 (550)
T ss_dssp -------CCCEEES-HHHHHHHHHHHHHHHTTTGGGSTTTCCCEEEECSSSCEEEECCHHHHTTTSCCCSHHHHHHHHHH
T ss_pred chhhhcCCcchhhh-HHHHHHHHHHHHHHHHHHHhccCCCCCcEEEECCCCCeEEECCHHHHHHHccCCCHHHHHHHHHH
Confidence 67789999999999 68999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhchhcCccchhhhHhhhhhhhhHHHHHhhhchhhHHHhhhccccccccCCCCchhHHHHHHHHHHHHHhhhCCCCHH
Q psy16434 251 QMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTPS 330 (745)
Q Consensus 251 ~~qd~~~GDGt~~~~~~~~~~l~~~~~~~~~~~~~~~~l~v~~~~~q~~~~GDgTTsvVvLa~eLL~~a~~li~~gihP~ 330 (745)
++||+++||| |||+|+||++||+++.++++.|+||+
T Consensus 88 ~~qd~e~GDG--------------------------------------------TTtvvVLA~~Ll~~a~~lv~~GihP~ 123 (550)
T 3p9d_G 88 RAQDAEVGDG--------------------------------------------TTSVTILAGELMKEAKPFLEEGISSH 123 (550)
T ss_dssp HHHHTTTSSC--------------------------------------------HHHHHHHHHHHHHTTSHHHHSSSCTT
T ss_pred HHhhhhhCCC--------------------------------------------ceehHHHHHHHHHHHHHHHHCCCCHH
Confidence 9999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcccccccccccCcc---cccccceeeeccccccCC-ChhhHHHHHHHHHHhhcCCCCCCCCccc
Q psy16434 331 EIVNGYKLALAKTLEILPTLTCFEVKDVRN---VENVTKGIKSAIMSKQYG-NEDFLTDLITKACVSILPDGSSSFNVDN 406 (745)
Q Consensus 331 ~I~~g~~~a~~~~l~~L~~~s~~~~~~~~~---~~~L~~va~tsl~sK~~~-~~~~ls~LivdAv~~v~~~~~~~~dl~~ 406 (745)
.|++||++|++.+++.|++++++.. ..+ ++.|.++|+|+++||+++ ++++|++|+++|+.++++ ..+|+++
T Consensus 124 ~I~~G~~~A~~~a~~~L~~~s~~v~--~~~~~~~~~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~---~~~dl~~ 198 (550)
T 3p9d_G 124 LIMKGYRKAVSLAVEKINELAVDIT--SEKSSGRELLERCARTAMSSKLIHNNADFFVKMCVDAVLSLDR---NDLDDKL 198 (550)
T ss_dssp HHHHHHHHHHHHHHHHHHHSEECCC--CC------CHHHHHHHHHHHTTTGGGHHHHHHHHHHHHHHCCS---SSCCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCC--CCcchhHHHHHHHHHHhccCccccccHhHHHHHHHHHHHHhCc---cccCchh
Confidence 9999999999999999999987732 223 788999999999999997 579999999999999985 3588999
Q ss_pred eEEEEccCCCcccceeEeeEEEeecccC-----CceeeeCceEEEeccCCCccccccC----------------------
Q psy16434 407 VRITKILGSGLFNSEIVQGMVFKRSVEG-----DITKQTKAKIAVYTCPVDIATTETK---------------------- 459 (745)
Q Consensus 407 I~I~ki~Ggs~~dS~lv~G~~l~~~~~~-----~~~~i~nakIlil~~~Le~~k~e~k---------------------- 459 (745)
|+|+++.|++++||++++||+|++++.| +|++++||||++++++||+.+++.+
T Consensus 199 I~Vikv~Gg~~~ds~lv~G~~~dk~~~s~yf~~~~~~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l 278 (550)
T 3p9d_G 199 IGIKKIPGGAMEESLFINGVAFKKTFSYAGFEQQPKKFNNPKILSLNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLI 278 (550)
T ss_dssp CCCCBCCSSCGGGCCCCSSEEECCCSSCTTCSCSCSCCSSCCEEEECSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHH
T ss_pred eeEEEecCCCccceeEEeeEEEeccccccccccCcccccCceEEEeccccccccccccceeeeCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999875 5899999999999999998776531
Q ss_pred ------------------------------------------------------------CCCCcccccccccEEEEEEC
Q psy16434 460 ------------------------------------------------------------TPPAASELGYADSVAVDELG 479 (745)
Q Consensus 460 ------------------------------------------------------------~~p~a~~LG~a~~vq~~eiG 479 (745)
++++++.||+|+.+++.++|
T Consensus 279 ~~~v~~I~~~g~~vVi~~~~I~dla~~~L~~~gI~~v~~v~k~~lerIa~~tGa~iis~l~~l~~~~LG~a~~v~~~~ig 358 (550)
T 3p9d_G 279 FEKLRQVEETGANIVLSKLPIGDLATQFFADRNIFCAGRVSADDMNRVIQAVGGSIQSTTSDIKPEHLGTCALFEEMQIG 358 (550)
T ss_dssp HHHHHHHHTTTCSEEEESSCCCHHHHHTTGGGTCEEEECCCTTHHHHHHHHTCCCCBSSGGGCCGGGCCCCSBCCCCCCS
T ss_pred HHHHHHHHhcCCCEEEECCCccHHHHHHHHHcCCccccCcCHHHHHHHHHHhCCceecchhhCCHHHcCCceEEEEEEeC
Confidence 56788999999999999999
Q ss_pred CeeEEEEEecccccceeEEEEcCCchhhHHHHHHHHHHHHHHHHHHHH--------------------------------
Q psy16434 480 DTAVVVFKLEAAESRIATLVIRGATENYMDDIERAVDDGVNTFKGITK-------------------------------- 527 (745)
Q Consensus 480 dtsvti~~g~~l~~~a~TIIlrG~t~~IldE~eral~DAL~vlk~~~~-------------------------------- 527 (745)
++++++|+|+.. ++++||++||+|+.+++|.+|+++|||++++++++
T Consensus 359 ~e~~~~~~g~~~-~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~ 437 (550)
T 3p9d_G 359 SERYNLFQGCPQ-AKTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQNKLIVAGGGATEMEVSKCLRDYSKTIAGKQQM 437 (550)
T ss_dssp SSCCEEEBCCTT-CCCCCCCBCSSSHHHHHHHHHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTCCSTTHH
T ss_pred CeEEEEEecCCC-CceeEEEEeCCcHHHHHHHHHHHHhHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhhcCChHHHH
Confidence 999999999986 88999999999999999999999999999999987
Q ss_pred ----------HHHHHHHhhccchhhHHHHHHHHHhhcCCccceeeecCCCcceeecccccccccccchhhHhhhhhhcch
Q psy16434 528 ----------VFVKTLAENTGVKSNEVISKLYSAHNEGKKTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAAN 597 (745)
Q Consensus 528 ----------~IPr~LaeNAGld~~~vlsKL~~~h~~g~~~~GIDl~~~~ikI~dm~g~gI~Ds~lVkG~vL~~A~e~a~ 597 (745)
.+|++|++|||+|+.+++++|++.|.++..++|||+.++ ++.||...|||||+.|+..+|+.|++.+.
T Consensus 438 ~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g--~~~dm~~~gI~dp~~vk~~al~~A~~~a~ 515 (550)
T 3p9d_G 438 IINAFAKALEVIPRQLCENAGFDAIEILNKLRLAHSKGEKWYGVVFETE--NIGDNFAKFVWEPALVKINALNSATEATN 515 (550)
T ss_dssp HHHHHHHHHTHHHHHHHHTSCSCHHHHHHHHHHHHHHSCSCCCBCSSSS--SBCCHHHHTCEEEHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeeeCCCC--cccchHhccCEecHHHHHHHHHHHHHHHH
Confidence 678999999999999999999999977777899999999 99999999999999999999999999999
Q ss_pred hhcccccceee
Q psy16434 598 TILQQTKAKIA 608 (745)
Q Consensus 598 mil~IDn~kIl 608 (745)
|++++|++...
T Consensus 516 ~iL~id~ii~~ 526 (550)
T 3p9d_G 516 LILSVDETITN 526 (550)
T ss_dssp HHHTEEEEECC
T ss_pred HHHhHHHHhhC
Confidence 99999988653
No 14
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=2.9e-70 Score=628.51 Aligned_cols=384 Identities=27% Similarity=0.455 Sum_probs=355.5
Q ss_pred cccccccccChHHHHHHHHHHHHHHHhhccccccccccceeeecCCCCeEEecCHHHHHhhccccChhhHHHHHHHhhhh
Q psy16434 175 FQYYDKHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHPAAKLIILGSQMQE 254 (745)
Q Consensus 175 ~~~~~~~~~g~~~a~~~ni~~~~~la~~v~tsLGP~G~~KmIv~~~g~i~ITnDG~tIlk~l~~~hP~akll~~~s~~qd 254 (745)
|+++.+..+| ++++.+|+.||.+|+++|+|||||+||||||+++.|+++|||||+||||+|+++||+|||++++|++||
T Consensus 13 ~~~~~~~~~g-~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd 91 (559)
T 3p9d_A 13 LFLGGEKISG-DDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQHPAGKILVELAQQQD 91 (559)
T ss_dssp CCSSCEEEET-HHHHHHHHHHHHHHHHHTTTTSSTTCCEEEECCSSSCCCEECCHHHHHHHHCCCSHHHHHHHHHHHHHH
T ss_pred hhccccccch-HHHHHHHHHHHHHHHHHHHhccCCCCCeeEeEcCCCCEEEECCHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 5677888889 689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhcCccchhhhHhhhhhhhhHHHHHhhhchhhHHHhhhccccccccCCCCchhHHHHHHHHHHHHHhhhCCCCHHHHHH
Q psy16434 255 EEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTPSEIVN 334 (745)
Q Consensus 255 ~~~GDGt~~~~~~~~~~l~~~~~~~~~~~~~~~~l~v~~~~~q~~~~GDgTTsvVvLa~eLL~~a~~li~~gihP~~I~~ 334 (745)
+++||| |||+|+||++||++|.+++++|+||+.|++
T Consensus 92 ~e~GDG--------------------------------------------TTtvvVLA~~LL~~a~~li~~GihP~~I~~ 127 (559)
T 3p9d_A 92 REIGDG--------------------------------------------TTSVVIIASELLKRANELVKNKIHPTTIIT 127 (559)
T ss_dssp HHTSSC--------------------------------------------HHHHHHHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred HHcCCC--------------------------------------------cchHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 999999 999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccc-ccccccccCcccccccceeeeccccccCCC-hhhHHHHHHHHHHhhcC-C--CCCCCCccceEE
Q psy16434 335 GYKLALAKTLEILPT-LTCFEVKDVRNVENVTKGIKSAIMSKQYGN-EDFLTDLITKACVSILP-D--GSSSFNVDNVRI 409 (745)
Q Consensus 335 g~~~a~~~~l~~L~~-~s~~~~~~~~~~~~L~~va~tsl~sK~~~~-~~~ls~LivdAv~~v~~-~--~~~~~dl~~I~I 409 (745)
||++|++.+++.|++ ++.+. +..+++.|.++|+|+++||++++ +++|++|+++|+.++++ + ..+.+|+++|+|
T Consensus 128 G~~~A~~~a~~~L~~~~s~~v--~~~~~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~~i~l~~I~I 205 (559)
T 3p9d_A 128 GFRVALREAIRFINEVLSTSV--DTLGKETLINIAKTSMSSKIIGADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNV 205 (559)
T ss_dssp HHHHHHHHHHHHHHHHTGGGS--CC--CTTHHHHHHHTTSSSGGGTTHHHHHHHHHHHHHHHCCEESSSCEECCTTCCCE
T ss_pred HHHHHHHHHHHHHHHhcccCC--CCCCHHHHHHHHHHHhccCcccchhHHHHHHHHHHHHHhcccccCCCCccchhHeEE
Confidence 999999999999999 88773 33467899999999999999985 79999999999999985 2 135789999999
Q ss_pred EEccCCCcccceeEeeEEEeecccC--Cceeee--CceEEEeccCCCccccccC--------------------------
Q psy16434 410 TKILGSGLFNSEIVQGMVFKRSVEG--DITKQT--KAKIAVYTCPVDIATTETK-------------------------- 459 (745)
Q Consensus 410 ~ki~Ggs~~dS~lv~G~~l~~~~~~--~~~~i~--nakIlil~~~Le~~k~e~k-------------------------- 459 (745)
+++.|++++||++++||+|++++.+ +|++++ ||||++++++|++.+++.+
T Consensus 206 ~k~~Ggs~~ds~lv~G~v~dk~~~~~~m~~~ie~~n~kIll~~~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~l 285 (559)
T 3p9d_A 206 LKAHGKSATESLLVPGYALNCTVASQAMPKRIAGGNVKIACLDLNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERV 285 (559)
T ss_dssp EEEESSCSSCCBCCSEECCCCCCSSTTSCSEECSSSBCEEEETTCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHH
T ss_pred EEecCCCccceeEeccEEEeecccCCCcceeeccCCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999987 599999 9999999999998776421
Q ss_pred --------------------------------------------------------------CCCCcccccccccEEEEE
Q psy16434 460 --------------------------------------------------------------TPPAASELGYADSVAVDE 477 (745)
Q Consensus 460 --------------------------------------------------------------~~p~a~~LG~a~~vq~~e 477 (745)
++++++.||+|+++++.+
T Consensus 286 e~I~~~g~~lvI~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~TGa~iis~~~~l~~~e~~~~~~LG~a~~v~~~~ 365 (559)
T 3p9d_A 286 KKIIDAGAQVVLTTKGIDDLCLKEFVEAKIMGVRRCKKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDEVVQAK 365 (559)
T ss_dssp HHHHTTCCSEEEESSCCCGGGTHHHHHTTCEEESSCCHHHHHHHHHHSSCCCBCCSCCSTTCCCCCTTTSCCEEEEEEEE
T ss_pred HHHHhhCCCEEEEcCCCCHHHHHHHHHcCCceEccCCHHHHHHHHHHhCCEEEeccccccccccCCHhHCccceEEEEEE
Confidence 256788999999999999
Q ss_pred ECCeeEEEEEecccccceeEEEEcCCchhhHHHHHHHHHHHHHHHHHHHH------------------------------
Q psy16434 478 LGDTAVVVFKLEAAESRIATLVIRGATENYMDDIERAVDDGVNTFKGITK------------------------------ 527 (745)
Q Consensus 478 iGdtsvti~~g~~l~~~a~TIIlrG~t~~IldE~eral~DAL~vlk~~~~------------------------------ 527 (745)
+|++++++|.|+.. ++++||++||+|+.+++|.+|+++||+++++++++
T Consensus 366 ig~~~~~~~~g~~~-~~~~tI~lrG~te~~l~E~kr~l~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~e 444 (559)
T 3p9d_A 366 FSDDECILIKGTSK-HSSSSIILRGANDYSLDEMERSLHDSLSVVKRTLESGNVVPGGGCVEAALNIYLDNFATTVGSRE 444 (559)
T ss_dssp CSSCEEECEEEESS-SCCCCEEEEESCHHHHHHHHHHHHHHHHHHHHHHTSSCEECTTTTHHHHHHHHHHHHHTTSCTTH
T ss_pred EcCceEEEEEcCCC-CCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhcCCEEeCccHHHHHHHHHHHHHhcccChHH
Confidence 99999999999987 88999999999999999999999999999999987
Q ss_pred ------------HHHHHHHhhccchhhHHHHHHHHHhhcCCc------------cceeeecCCCcceeeccccccccccc
Q psy16434 528 ------------VFVKTLAENTGVKSNEVISKLYSAHNEGKK------------TYGFDINGENSSVIDAAEAGILDLYL 583 (745)
Q Consensus 528 ------------~IPr~LaeNAGld~~~vlsKL~~~h~~g~~------------~~GIDl~~~~ikI~dm~g~gI~Ds~l 583 (745)
.+|++|++|||+|+.+++++|++.|..+.. ++|||+.++ .+.||...|||||+.
T Consensus 445 q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~~~~~~~~~~~~G~d~~~g--~~~dm~~~gI~dp~~ 522 (559)
T 3p9d_A 445 QLAIAEFAAALLIIPKTLAVNAAKDSSELVAKLRSYHAASQMAKPEDVKRRSYRNYGLDLIRG--KIVDEIHAGVLEPTI 522 (559)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHTTSCCC----CCCCCCCEEECTTSS--SEEESTTSSCCEEHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhccccccccccccccccceeEECCCC--cEeehhhccCEecHH
Confidence 578999999999999999999999876644 789999999 999999999999999
Q ss_pred chhhHhhhhhhcchhhcccccceee
Q psy16434 584 TKMWALKYATSAANTILQQTKAKIA 608 (745)
Q Consensus 584 VkG~vL~~A~e~a~mil~IDn~kIl 608 (745)
|+..+|+.|++.+.|++++|++...
T Consensus 523 vk~~al~~A~e~a~~iL~id~ii~~ 547 (559)
T 3p9d_A 523 SKVKSLKSALEACVAILRIDTMITV 547 (559)
T ss_dssp HHHHHHHHHHHHHHHHHTEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHhHHhhhhc
Confidence 9999999999999999999988654
No 15
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=8.1e-70 Score=620.11 Aligned_cols=380 Identities=26% Similarity=0.437 Sum_probs=353.0
Q ss_pred ccccChHHHHHHHHHHHHHHHhhccccccccccceeeecCCCCeEEecCHHHHHhhccccChhhHHHHHHHhhhhchhcC
Q psy16434 180 KHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHPAAKLIILGSQMQEEEMGD 259 (745)
Q Consensus 180 ~~~~g~~~a~~~ni~~~~~la~~v~tsLGP~G~~KmIv~~~g~i~ITnDG~tIlk~l~~~hP~akll~~~s~~qd~~~GD 259 (745)
++.+| .+++.+|+.||..|+++|+|||||+||||||+++.|+++|||||+||||+|+++||+|||++++|++||+++||
T Consensus 4 ~~~~g-~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~g~~~iTnDG~tIlk~i~~~hP~Akll~~~a~~qd~~~GD 82 (515)
T 3iyg_E 4 SRLMG-LEALKSHIMAAKAVANTMKTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGD 82 (515)
T ss_pred hhhch-HHHHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCCCeEEeCcHHHHHHHcccCCHHHHHHHHHHHHhhhhhCC
Confidence 45667 58999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhhHhhhhhhhhHHHHHhhhchhhHHHhhhccccccccCCCCchhHHHHHHHHHHHHHhhhCCCCHHHHHHHHHHH
Q psy16434 260 GTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTPSEIVNGYKLA 339 (745)
Q Consensus 260 Gt~~~~~~~~~~l~~~~~~~~~~~~~~~~l~v~~~~~q~~~~GDgTTsvVvLa~eLL~~a~~li~~gihP~~I~~g~~~a 339 (745)
| |||+++||++||++|.+++++|+||+.|++||++|
T Consensus 83 G--------------------------------------------TTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A 118 (515)
T 3iyg_E 83 G--------------------------------------------TTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQA 118 (515)
T ss_pred c--------------------------------------------hhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 9 99999999999999999999999999999999999
Q ss_pred HHHHHHhcccccccccccCcccccccceeeeccccccCCC-hhhHHHHHHHHHHhhcCCCCCCCCccceEEEEccCCCcc
Q psy16434 340 LAKTLEILPTLTCFEVKDVRNVENVTKGIKSAIMSKQYGN-EDFLTDLITKACVSILPDGSSSFNVDNVRITKILGSGLF 418 (745)
Q Consensus 340 ~~~~l~~L~~~s~~~~~~~~~~~~L~~va~tsl~sK~~~~-~~~ls~LivdAv~~v~~~~~~~~dl~~I~I~ki~Ggs~~ 418 (745)
++.+++.|++++++...+..+++.|.++|+||++||.++. .++|++++++|+..+.+.....+|+++|+|+++.|+++.
T Consensus 119 ~~~a~~~L~~~s~~v~~~~~~~~~l~~vA~tsl~sK~i~~~~~~l~~l~~dav~~V~~~~~~~~d~~~I~I~k~~Ggs~~ 198 (515)
T 3iyg_E 119 ARIAIEHLDKISDSVLVDMKNTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMQRRDVDFELIKVEGKVGGRLE 198 (515)
T ss_pred HHHHHHHHHHhceecCCCccCHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHhhcccccCCCCcccEEEEEecCCCcc
Confidence 9999999999988754444567889999999999999884 799999999999999764344688999999999999999
Q ss_pred cceeEeeEEEeecccC--CceeeeCceEEEeccCCCccccccC-------------------------------------
Q psy16434 419 NSEIVQGMVFKRSVEG--DITKQTKAKIAVYTCPVDIATTETK------------------------------------- 459 (745)
Q Consensus 419 dS~lv~G~~l~~~~~~--~~~~i~nakIlil~~~Le~~k~e~k------------------------------------- 459 (745)
||++++||+|++++.| +|+.++||+|++++++|++.+++.+
T Consensus 199 ds~lv~G~~~dk~~~~~~m~~~~~~~kIall~~~le~~k~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vv 278 (515)
T 3iyg_E 199 DTKLIKGVIVDKDFSHPQMPKQVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLA 278 (515)
T ss_pred cceEEeeEEEecccccccccccCCCceEEEEcCccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 9999999999999986 5999999999999999998865421
Q ss_pred ---------------------------------------------CCCCcccccccccEEEEEECC--eeEEEEEecccc
Q psy16434 460 ---------------------------------------------TPPAASELGYADSVAVDELGD--TAVVVFKLEAAE 492 (745)
Q Consensus 460 ---------------------------------------------~~p~a~~LG~a~~vq~~eiGd--tsvti~~g~~l~ 492 (745)
+++++++||+|+++++.++|+ +++++|+|+..
T Consensus 279 i~~~~I~~~al~~L~~~~I~~v~~v~k~~le~ia~~tGa~ii~~l~~l~~~~LG~a~~v~~~~ig~~k~~~~~~~g~~~- 357 (515)
T 3iyg_E 279 VCQWGFDDEANHLLLQNDLPAVRWVGGPEIELIAIATGGRIVPRFSELTAEKLGFAGLVKEISFGTTKDKMLVIEQCKN- 357 (515)
T ss_pred EEeCCCCHHHHHHHHHCCCEEEeccCHHHHHHHHHHhCCEEecccccCCHHHCCcceEEEEEEeccccceEEEEEcCCC-
Confidence 778889999999999999998 89999999987
Q ss_pred cceeEEEEcCCchhhHHHHHHHHHHHHHHHHHHHH------------------------------------------HHH
Q psy16434 493 SRIATLVIRGATENYMDDIERAVDDGVNTFKGITK------------------------------------------VFV 530 (745)
Q Consensus 493 ~~a~TIIlrG~t~~IldE~eral~DAL~vlk~~~~------------------------------------------~IP 530 (745)
++++||++||+|+.+++|.+|+++||+++++++++ .+|
T Consensus 358 ~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip 437 (515)
T 3iyg_E 358 SRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIP 437 (515)
T ss_pred CceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999987 578
Q ss_pred HHHHhhccchhhHHHHHHHHHhhc-CCccceeeecCCCcceeecccccccccccchhhHhhhhhhcchhhccccccee
Q psy16434 531 KTLAENTGVKSNEVISKLYSAHNE-GKKTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAANTILQQTKAKI 607 (745)
Q Consensus 531 r~LaeNAGld~~~vlsKL~~~h~~-g~~~~GIDl~~~~ikI~dm~g~gI~Ds~lVkG~vL~~A~e~a~mil~IDn~kI 607 (745)
++|++|||+|+.+++++|++.|.. +..++|||+.++ .+.||...|||||+.|+.++|+.|++.+.|++++|++..
T Consensus 438 ~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g--~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~ 513 (515)
T 3iyg_E 438 MALAENSGMNPIQTMTEVRARQVKEVNPALGIDCLHK--GTNDMKHQHVIETLIGKKQQISLATQMVRMILKIDDIRK 513 (515)
T ss_pred HHHHHhCCCCHHHHHHHHHHHHhccCCCeeeEecCCC--cccchHhccCEEcHHHHHHHHHHHHHHHHHHHhHHHhhc
Confidence 999999999999999999999875 456799999999 999999999999999999999999999999999998754
No 16
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=9.7e-71 Score=628.94 Aligned_cols=385 Identities=26% Similarity=0.426 Sum_probs=357.4
Q ss_pred cccccccccChHHHHHHHHHHHHHHHhhccccccccccceeeecCCCCeEEecCHHHHHhhccccChhhHHHHHHHhhhh
Q psy16434 175 FQYYDKHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHPAAKLIILGSQMQE 254 (745)
Q Consensus 175 ~~~~~~~~~g~~~a~~~ni~~~~~la~~v~tsLGP~G~~KmIv~~~g~i~ITnDG~tIlk~l~~~hP~akll~~~s~~qd 254 (745)
+..+.+..+| ++++.+|+.||..|+++|+|||||+||||||+++.|+++|||||+||||+|+++||+|+|++++|++||
T Consensus 8 ~~~~~~~~~g-~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~e~a~~qd 86 (528)
T 3p9d_D 8 NATFKNKEKP-QEVRKANIIAARSVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPVARMLVEVSAAQD 86 (528)
T ss_dssp CCSSCBCCCH-HHHHHHHHHHHHHHHHHHTTTSSTTCCCEEEECSSCCEEEECCHHHHHHHSCCCCTTHHHHHHHHHHHH
T ss_pred ccccchhcch-HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEECCHHHHHHHcccCCHHHHHHHHHHHHhh
Confidence 4556667778 689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhcCccchhhhHhhhhhhhhHHHHHhhhchhhHHHhhhccccccccCCCCchhHHHHHHHHHHHHHhhhCCCCHHHHHH
Q psy16434 255 EEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTPSEIVN 334 (745)
Q Consensus 255 ~~~GDGt~~~~~~~~~~l~~~~~~~~~~~~~~~~l~v~~~~~q~~~~GDgTTsvVvLa~eLL~~a~~li~~gihP~~I~~ 334 (745)
+++||| |||+++||++||+++.+++++|+||+.|++
T Consensus 87 ~e~GDG--------------------------------------------TTtvvVLA~~Ll~~a~~li~~GihP~~I~~ 122 (528)
T 3p9d_D 87 SEAGDG--------------------------------------------TTSVVILTGALLGAAERLLNKGIHPTIIAD 122 (528)
T ss_dssp HHTCSC--------------------------------------------SHHHHHHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred hhhCCC--------------------------------------------hhhHHHHHHHHHHHHHHHHHCCCChHHHHH
Confidence 999999 999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccccccccCcccccccceeeeccccccCC-ChhhHHHHHHHHHHhhcCCCCCCCCccceEEEEcc
Q psy16434 335 GYKLALAKTLEILPTLTCFEVKDVRNVENVTKGIKSAIMSKQYG-NEDFLTDLITKACVSILPDGSSSFNVDNVRITKIL 413 (745)
Q Consensus 335 g~~~a~~~~l~~L~~~s~~~~~~~~~~~~L~~va~tsl~sK~~~-~~~~ls~LivdAv~~v~~~~~~~~dl~~I~I~ki~ 413 (745)
||++|++.+++.|++++++. +..+++.|.++|+||++||+++ ++++|++|+++|+.++++...+.+|+++|+|+++.
T Consensus 123 G~~~A~~~a~~~L~~~s~~v--~~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~i~v~~I~I~k~~ 200 (528)
T 3p9d_D 123 SFQSAAKRSVDILLEMCHKV--SLSDREQLVRAASTSLSSKIVSQYSSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKV 200 (528)
T ss_dssp HHHHHHHHHHHHHHTTCCCC--CSCCHHHHHHHHHHHSCSSSCSTTHHHHHHHHHHHHHTTCCTTTTCCCGGGSBCCCCC
T ss_pred HHHHHHHHHHHHHHHhhCCC--CCCCHHHHHHHHHHHhcCCccchhHHHHHHHHHHHHHHhccccCCccceEEEEEEEec
Confidence 99999999999999998773 3347889999999999999998 48999999999999998743467999999999999
Q ss_pred CCCcccceeEeeEEEeecccC---CceeeeCceEEEeccCCCccccccC-------------------------------
Q psy16434 414 GSGLFNSEIVQGMVFKRSVEG---DITKQTKAKIAVYTCPVDIATTETK------------------------------- 459 (745)
Q Consensus 414 Ggs~~dS~lv~G~~l~~~~~~---~~~~i~nakIlil~~~Le~~k~e~k------------------------------- 459 (745)
|++++||++++||+|++++.| ||++++||||++++++|++.+++.+
T Consensus 201 Gg~~~ds~lv~G~v~dk~~~~~~~m~~~ien~kIll~~~~le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~ 280 (528)
T 3p9d_D 201 GGTIDDTEMIDGVVLTQTAIKSAGGPTRKEKAKIGLIQFQISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKK 280 (528)
T ss_dssp SSCSCCCEEESSCBCCCCCCCSSSCCSEESSEEEEEECCCSSCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHH
T ss_pred CCCccceEEEeeeEEeecccCcccCcccccCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999975 6899999999999999998765311
Q ss_pred --------------------------------------------------------CCCCcccccccccEEEEEECCeeE
Q psy16434 460 --------------------------------------------------------TPPAASELGYADSVAVDELGDTAV 483 (745)
Q Consensus 460 --------------------------------------------------------~~p~a~~LG~a~~vq~~eiGdtsv 483 (745)
++++++.||+|+++++.++|++++
T Consensus 281 ~g~~vvi~~~~I~~~a~~~~al~~L~~~~I~av~~~~k~~le~ia~~tGa~ii~~~~~l~~~~LG~a~~v~~~~ig~~~~ 360 (528)
T 3p9d_D 281 AKCNVLLIQKSILRDAVNDLALHFLSKLNIMVVKDIEREEIEFLSKGLGCKPIADIELFTEDRLDSADLVEEIDSDGSKI 360 (528)
T ss_dssp TTCCEEEESSCSCTTSCSCHHHHHHTTTSCCEEECCCTHHHHHHHHHHTCCCCSCSTTCCSSSEEEESCEECCEETTEEC
T ss_pred cCCCEEEEeCCcccccCCHHHHHHHHHcCcEEEEeCCHHHHHHHHHHHCCEEecccccCCHHHCCcccEEEEEEECCEEE
Confidence 677889999999999999999999
Q ss_pred EEEEecc--cccceeEEEEcCCchhhHHHHHHHHHHHHHHHHHHHH----------------------------------
Q psy16434 484 VVFKLEA--AESRIATLVIRGATENYMDDIERAVDDGVNTFKGITK---------------------------------- 527 (745)
Q Consensus 484 ti~~g~~--l~~~a~TIIlrG~t~~IldE~eral~DAL~vlk~~~~---------------------------------- 527 (745)
++|.|+. ..++++||++||+|+.+++|.+|+++||+++++++++
T Consensus 361 ~~i~g~~~~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i 440 (528)
T 3p9d_D 361 VRVTGIRNNNARPTVSVVIRGANNMIIDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLSKEARSMEGVQAFIW 440 (528)
T ss_dssp CBCTTBCCGGGCCCCEEECCCSSTTHHHHHHHHHTTTHHHHHHHHHSSCEEETTTHHHHHHHHHHHHCCTTSCHHHHTTH
T ss_pred EEEEcccccCCCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCCHHHHHHHHHHHHHhhccChHHHHHH
Confidence 9999986 3267899999999999999999999999999999987
Q ss_pred --------HHHHHHHhhccchhhHHHHHHHHHhhcCCccceeeecCCCcceeecccccccccccchhhHhhhhhhcchhh
Q psy16434 528 --------VFVKTLAENTGVKSNEVISKLYSAHNEGKKTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAANTI 599 (745)
Q Consensus 528 --------~IPr~LaeNAGld~~~vlsKL~~~h~~g~~~~GIDl~~~~ikI~dm~g~gI~Ds~lVkG~vL~~A~e~a~mi 599 (745)
.+|++||+|||+|+.+++++|++.|.++..++|||+.++ ++.||...|||||+.|+..+++.|++.+.|+
T Consensus 441 ~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g--~~~dm~~~gI~dp~~vk~~al~~A~e~a~~i 518 (528)
T 3p9d_D 441 QEFASALEVIPTTLAENAGLNSIKVVTELRSKHENGELNDGISVRRS--GTTNTYEEHILQPVLVSTSAITLASECVKSI 518 (528)
T ss_dssp HHHHHHHTHHHHHHHHTTSSCHHHHHHHHTTCCCSSSCCCCCCSSSS--SCCCHHHHCCEEEHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccCCccceecCCC--CccchHhccCeecHHHHHHHHHHHHHHHHHH
Confidence 579999999999999999999999887777899999999 9999999999999999999999999999999
Q ss_pred cccccceee
Q psy16434 600 LQQTKAKIA 608 (745)
Q Consensus 600 l~IDn~kIl 608 (745)
+++|++..+
T Consensus 519 L~iD~ii~~ 527 (528)
T 3p9d_D 519 LRIDDIAFS 527 (528)
T ss_dssp HHCSCCCBC
T ss_pred HhhhHheec
Confidence 999998653
No 17
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=1.6e-69 Score=622.67 Aligned_cols=390 Identities=25% Similarity=0.395 Sum_probs=353.6
Q ss_pred ceeecccc--cccccChHHHHHHHHHHHHHHHhhccccccccccceeeecCCCCeEEecCHHHHHhhccccChhhHHHHH
Q psy16434 171 PAAIFQYY--DKHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHPAAKLIIL 248 (745)
Q Consensus 171 ~~~~~~~~--~~~~~g~~~a~~~ni~~~~~la~~v~tsLGP~G~~KmIv~~~g~i~ITnDG~tIlk~l~~~hP~akll~~ 248 (745)
|..++.++ .+..+| ++++.+|+.||..|+++|+|||||+||||||+++.|+++|||||+||||+|+++||+|||+++
T Consensus 28 ~~~~~~~~~~~~~~~g-~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e 106 (562)
T 3p9d_E 28 PFIIVKDQGNKKRQHG-LEAKKSHILAARSVASIIKTSLGPRGLDKILISPDGEITITNDGATILSQMELDNEIAKLLVQ 106 (562)
T ss_dssp --CCCSSBCCCSCSHH-HHHHHHHHHHHHHHHHHTTTSSSTTCCEEEEECSSSCEEEESCHHHHHHHSCCCSHHHHHHHH
T ss_pred CeEEeccCCcceecch-HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCEEEECCHHHHHHHccCCCHHHHHHHH
Confidence 44555554 244567 689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhchhcCccchhhhHhhhhhhhhHHHHHhhhchhhHHHhhhccccccccCCCCchhHHHHHHHHHHHHHhhhCCCC
Q psy16434 249 GSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLT 328 (745)
Q Consensus 249 ~s~~qd~~~GDGt~~~~~~~~~~l~~~~~~~~~~~~~~~~l~v~~~~~q~~~~GDgTTsvVvLa~eLL~~a~~li~~gih 328 (745)
+|++||+++||| |||+++||++||++|.+++++|+|
T Consensus 107 ~a~~qd~e~GDG--------------------------------------------TTtvvVLA~~LL~~a~~li~~Gih 142 (562)
T 3p9d_E 107 LSKSQDDEIGDG--------------------------------------------TTGVVVLASALLDQALELIQKGIH 142 (562)
T ss_dssp HHHHHHHHTSSC--------------------------------------------TTHHHHHHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHhhcCCC--------------------------------------------cccHHHHHHHHHHHHHHHHHCCCC
Confidence 999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccccccCccc--ccccceeeeccccccCCC-hhhHHHHHHHHHHhhcCCCCCCCCcc
Q psy16434 329 PSEIVNGYKLALAKTLEILPTLTCFEVKDVRNV--ENVTKGIKSAIMSKQYGN-EDFLTDLITKACVSILPDGSSSFNVD 405 (745)
Q Consensus 329 P~~I~~g~~~a~~~~l~~L~~~s~~~~~~~~~~--~~L~~va~tsl~sK~~~~-~~~ls~LivdAv~~v~~~~~~~~dl~ 405 (745)
|+.|++||++|++.+++.|++++++...+..++ +.|.++|+||++||+++. .++|++++++|+..+.+...+.+|++
T Consensus 143 P~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~e~L~~vA~tSl~sK~i~~~~d~la~l~vdAV~~V~~~~~~~~d~~ 222 (562)
T 3p9d_E 143 PIKIANGFDEAAKLAISKLEETCDDISASNDELFRDFLLRAAKTSLGSKIVSKDHDRFAEMAVEAVINVMDKDRKDVDFD 222 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTTSSSSBCCCSSCHHHHHHHHHHHHSSSTTTTTHHHHHHHHHHHHHTSSTTTCSCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCcCCCcchhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHheeecccccCCCCcc
Confidence 999999999999999999999987743322222 689999999999999984 79999999999999976434578999
Q ss_pred ceEEEEccCCCcccceeEeeEEEeecccC--Cceee------eCceEEEeccCCCccccccC------------------
Q psy16434 406 NVRITKILGSGLFNSEIVQGMVFKRSVEG--DITKQ------TKAKIAVYTCPVDIATTETK------------------ 459 (745)
Q Consensus 406 ~I~I~ki~Ggs~~dS~lv~G~~l~~~~~~--~~~~i------~nakIlil~~~Le~~k~e~k------------------ 459 (745)
+|+|+++.|+++.||++++||+|++++.| +|+.+ +|++|++++++|++.+++.+
T Consensus 223 ~I~I~k~~Ggs~~ds~lveGmv~dk~~~sp~m~~~~~~~~~~~~~kIall~~~le~~k~~~~~~~~Iss~~~~~~~~~~E 302 (562)
T 3p9d_E 223 LIKMQGRVGGSISDSKLINGVILDKDFSHPQMPKCVLPKEGSDGVKLAILTCPFEPPKPKTKHKLDISSVEEYQKLQTYE 302 (562)
T ss_dssp CCEEEEESSSCGGGCEEESSEEESSCCCTTSCCC-----TTCSSCEECEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHH
T ss_pred cEEEEEecCCChhhhceeeeEEEecCCCCCCcCcccccccccccceEEEecccccccccccCceEEECCHHHHHHHHHHH
Confidence 99999999999999999999999999986 48888 89999999999999876421
Q ss_pred ----------------------------------------------------------------CCCCcccccccccEEE
Q psy16434 460 ----------------------------------------------------------------TPPAASELGYADSVAV 475 (745)
Q Consensus 460 ----------------------------------------------------------------~~p~a~~LG~a~~vq~ 475 (745)
++++++.||+|+++++
T Consensus 303 ~~~l~~~lekI~~~g~~vvI~~~~I~~~Al~~L~~~~I~~v~~v~k~~le~ia~~TGa~iis~l~~l~~~~LG~a~~v~~ 382 (562)
T 3p9d_E 303 QDKFKEMIDDVKKAGADVVICQWGFDDEANHLLLQNDLPAVRWVGGQELEHIAISTNGRIVPRFQDLSKDKLGTCSRIYE 382 (562)
T ss_dssp HHHHHHHHHHHHHHTCSCCEECSSCCSHHHHHHHTTTCCCEECCCTTTHHHHHHHHCCCEEESSSCCCTTSCEECSCEEE
T ss_pred HHHHHHHHHHHHHcCCcEEEEeCCCCHHHHHHHHHCCCEEEeccCHHHHHHHHHHhCCEEEeccccCCHHHCCcceEEEE
Confidence 7788999999999999
Q ss_pred EEECC--eeEEEEEecccccceeEEEEcCCchhhHHHHHHHHHHHHHHHHHHHH--------------------------
Q psy16434 476 DELGD--TAVVVFKLEAAESRIATLVIRGATENYMDDIERAVDDGVNTFKGITK-------------------------- 527 (745)
Q Consensus 476 ~eiGd--tsvti~~g~~l~~~a~TIIlrG~t~~IldE~eral~DAL~vlk~~~~-------------------------- 527 (745)
.++|+ +++++|.|+.. ++++||++||+|+.+++|.+|+++||+++++++++
T Consensus 383 ~~ig~~~~~~~~i~g~~~-~~~~TIllrG~te~~l~E~kr~i~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~ 461 (562)
T 3p9d_E 383 QEFGTTKDRMLIIEQSKE-TKTVTCFVRGSNKMIVDEAERALHDSLCVVRNLVKDSRVVYGGGAAEVTMSLAVSEEADKQ 461 (562)
T ss_dssp ECCSSSSCCEEEECCCSC-CSCCEEEEECTTTTTHHHHTHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTT
T ss_pred EEeccCCceEEEEecCCC-CCeEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCCcHHHHHHHHHHHHHhccC
Confidence 99995 89999999987 88999999999999999999999999999999997
Q ss_pred ----------------HHHHHHHhhccchhhHHHHHHHHHhhc-CCccceeeecCCCcceeecccccccccccchhhHhh
Q psy16434 528 ----------------VFVKTLAENTGVKSNEVISKLYSAHNE-GKKTYGFDINGENSSVIDAAEAGILDLYLTKMWALK 590 (745)
Q Consensus 528 ----------------~IPr~LaeNAGld~~~vlsKL~~~h~~-g~~~~GIDl~~~~ikI~dm~g~gI~Ds~lVkG~vL~ 590 (745)
.+|++|++|||+|+.+++++|++.|.. +..++|||+.++ .+.||...|||||+.|+..+|+
T Consensus 462 ~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~G~d~~~g--~~~dm~~~gI~dp~~vk~~al~ 539 (562)
T 3p9d_E 462 RGIDQYAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKSKQLKEKISNIGVDCLGY--GSNDMKELFVVDPFIGKKQQIL 539 (562)
T ss_dssp CTTHHHHHHHHHHHHTHHHHHHHHTTTSCHHHHHHHHHHHHHHTTTSSBCCBTTTT--BCCBTTTTTCEEEHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCceeEecCCC--cccchHhccCEEcHHHHHHHHH
Confidence 679999999999999999999999875 446799999999 9999999999999999999999
Q ss_pred hhhhcchhhcccccceee
Q psy16434 591 YATSAANTILQQTKAKIA 608 (745)
Q Consensus 591 ~A~e~a~mil~IDn~kIl 608 (745)
.|++.+.|++++|++..+
T Consensus 540 ~A~e~a~~iL~iD~ii~~ 557 (562)
T 3p9d_E 540 LATQLCRMILKIDNVIIS 557 (562)
T ss_dssp HHHHHHHHHHTEEEEEEC
T ss_pred HHHHHHHHHHHHHHhhcC
Confidence 999999999999998653
No 18
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=9.8e-70 Score=619.23 Aligned_cols=373 Identities=26% Similarity=0.384 Sum_probs=348.3
Q ss_pred ccChHHHHHHHHHHHHHHHhhccccccccccceeeecCCCCeEEecCHHHHHhhccccChhhHHHHHHHhhhhchhcCcc
Q psy16434 182 FSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHPAAKLIILGSQMQEEEMGDGT 261 (745)
Q Consensus 182 ~~g~~~a~~~ni~~~~~la~~v~tsLGP~G~~KmIv~~~g~i~ITnDG~tIlk~l~~~hP~akll~~~s~~qd~~~GDGt 261 (745)
.+| .+++.+||.||.+|+++|+|||||+||||||+++.|+++|||||+||||+|+++||+|||++++|++||+++|||
T Consensus 6 ~~~-~~a~~~ni~a~~~la~~vkttlGPkG~~kml~~~~g~~~iTnDG~tIlk~i~v~hp~akll~~~a~~qd~e~GDG- 83 (517)
T 3iyg_Z 6 ARA-QAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITGDG- 83 (517)
T ss_pred hhH-HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHHHHHHHHhCCC-
Confidence 455 589999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhHhhhhhhhhHHHHHhhhchhhHHHhhhccccccccCCCCchhHHHHHHHHHHHHHhhhCCCCHHHHHHHHHHHHH
Q psy16434 262 NFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTPSEIVNGYKLALA 341 (745)
Q Consensus 262 ~~~~~~~~~~l~~~~~~~~~~~~~~~~l~v~~~~~q~~~~GDgTTsvVvLa~eLL~~a~~li~~gihP~~I~~g~~~a~~ 341 (745)
|||+++||++||++|.+++++|+||+.|++||++|++
T Consensus 84 -------------------------------------------TTtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~ 120 (517)
T 3iyg_Z 84 -------------------------------------------TTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKE 120 (517)
T ss_pred -------------------------------------------ceeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999
Q ss_pred HHHHhcccccccccccCcccccccceeeeccccccCC-ChhhHHHHHHHHHHhhcCCCCCCCCccceEEEEccCCCcccc
Q psy16434 342 KTLEILPTLTCFEVKDVRNVENVTKGIKSAIMSKQYG-NEDFLTDLITKACVSILPDGSSSFNVDNVRITKILGSGLFNS 420 (745)
Q Consensus 342 ~~l~~L~~~s~~~~~~~~~~~~L~~va~tsl~sK~~~-~~~~ls~LivdAv~~v~~~~~~~~dl~~I~I~ki~Ggs~~dS 420 (745)
.+++.|++++++.. . +++.|.++|+|+++||+.+ +.++|++++++|+..+.+. +..+|+++|+|+|+.||+..||
T Consensus 121 ~a~~~L~~~s~~v~--~-~~~~L~~va~tsl~sKi~~~~~d~la~l~vdaV~~V~~~-~~~~dl~~I~I~k~~Gg~~~ds 196 (517)
T 3iyg_Z 121 KALQFLEQVKVSKE--M-DRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIKKQ-DEPIDLFMVEIMEMKHKSETDT 196 (517)
T ss_pred HHHHHHHhhCcCCC--C-CHHHHHHHHHHHhccccchhHHHHHHHHHHHHhheeccC-CCcCChhHheeeeecCCCcccc
Confidence 99999999987732 1 6788999999999999887 4799999999999998754 3468999999999999999999
Q ss_pred eeEeeEEEeecccC--CceeeeCceEEEeccCCCccccccC---------------------------------------
Q psy16434 421 EIVQGMVFKRSVEG--DITKQTKAKIAVYTCPVDIATTETK--------------------------------------- 459 (745)
Q Consensus 421 ~lv~G~~l~~~~~~--~~~~i~nakIlil~~~Le~~k~e~k--------------------------------------- 459 (745)
++++||+|++++.+ ||++++||||++++++||++|++.+
T Consensus 197 ~lv~G~v~dk~~~~p~m~~~ien~kIll~~~~le~~k~e~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~ 276 (517)
T 3iyg_Z 197 SLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGD 276 (517)
T ss_pred ceEeeEEEeccCCCCCccccccCCeEEEecccccccccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc
Confidence 99999999999987 5999999999999999987665310
Q ss_pred ----------------------------------------------------CCCCccc-ccccccEEEEEECCeeEEEE
Q psy16434 460 ----------------------------------------------------TPPAASE-LGYADSVAVDELGDTAVVVF 486 (745)
Q Consensus 460 ----------------------------------------------------~~p~a~~-LG~a~~vq~~eiGdtsvti~ 486 (745)
+++++++ ||+|+ +++..+|++++++|
T Consensus 277 ~~~~lvIi~~~~I~d~al~~L~~~gI~~v~~v~~~~leria~~tGa~iv~~l~~l~~~~~LG~a~-v~e~~ig~~~~~~~ 355 (517)
T 3iyg_Z 277 SDKGFVVINQKGIDPFSLDALAKEGIIALRRAKRRNMERLTLACGGIALNSLDDLNPDCLLGHAG-VYEYTLGEEKFTFI 355 (517)
T ss_pred cCCceEEEecccCCHHHHHHHHHCCCEEEEecCHHHHHHHHHHhCCEEecchhhCcccccCCcce-EEEEEEcCceEEEE
Confidence 6788888 99999 99999999999999
Q ss_pred EecccccceeEEEEcCCchhhHHHHHHHHHHHHHHHHHHHH---------------------------------------
Q psy16434 487 KLEAAESRIATLVIRGATENYMDDIERAVDDGVNTFKGITK--------------------------------------- 527 (745)
Q Consensus 487 ~g~~l~~~a~TIIlrG~t~~IldE~eral~DAL~vlk~~~~--------------------------------------- 527 (745)
+|+.. ++++||++||+|+.+++|.+|+++||+++++++++
T Consensus 356 ~g~~~-~~~~TI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ 434 (517)
T 3iyg_Z 356 EKCNN-PRSVTLLIKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALVKYKPSVKGRAQLGVQAFAD 434 (517)
T ss_pred eCCCC-chhheeeecCCcHHHHHHHHHHHHHHHHHHHHHHhcceEecCccHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Confidence 99987 88999999999999999999999999999999987
Q ss_pred ---HHHHHHHhhccchhhHHHHHHHHHhhcCCccceeeecCCCcceeecccccccccccchhhHhhhhhhcchhhccccc
Q psy16434 528 ---VFVKTLAENTGVKSNEVISKLYSAHNEGKKTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAANTILQQTK 604 (745)
Q Consensus 528 ---~IPr~LaeNAGld~~~vlsKL~~~h~~g~~~~GIDl~~~~ikI~dm~g~gI~Ds~lVkG~vL~~A~e~a~mil~IDn 604 (745)
.+|++||+|||+|+.+++++|++.|.++..++|||+.++ .+.||...|||||+.|+.++++.|++.+.|+++||+
T Consensus 435 ALe~iP~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g--~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ 512 (517)
T 3iyg_Z 435 ALLIIPKVLAQNSGFDLQETLVKVQAEHSESGQLVGVDLNTG--EPMVAAEAGIWDNYCVKKQLLHSCTVIATNILLVDE 512 (517)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCcEEEeCCCC--cccchhhccCeecHHHHHHHHHHHHHHHHHHHHHHH
Confidence 489999999999999999999999987777899999999 999999999999999999999999999999999998
Q ss_pred cee
Q psy16434 605 AKI 607 (745)
Q Consensus 605 ~kI 607 (745)
+..
T Consensus 513 ii~ 515 (517)
T 3iyg_Z 513 IMR 515 (517)
T ss_pred Hhh
Confidence 753
No 19
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=6.5e-70 Score=627.06 Aligned_cols=387 Identities=26% Similarity=0.427 Sum_probs=353.3
Q ss_pred ceeecccccccccChHHHHHHHHHHHHHHHhhccccccccccceeeecCCCCeEEecCHHHHHhhccccChhhHHHHHHH
Q psy16434 171 PAAIFQYYDKHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHPAAKLIILGS 250 (745)
Q Consensus 171 ~~~~~~~~~~~~~g~~~a~~~ni~~~~~la~~v~tsLGP~G~~KmIv~~~g~i~ITnDG~tIlk~l~~~hP~akll~~~s 250 (745)
|..+++++.++.+| .+++.+|+.||..|+++|+|||||+||||||+++.|+++|||||+||||+|+++||+|||++++|
T Consensus 4 ~~~~~~~~~~~~~g-~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~~~hP~Akll~e~a 82 (590)
T 3p9d_C 4 PVVFMNASQERTTG-RQAQISNITAAKAVADVIRTCLGPKAMLKMLLDPMGGLVLTNDGHAILREIDVAHPAAKSMLELS 82 (590)
T ss_dssp --CCSCTTCCBCTT-HHHHHTTHHHHHHHHHHSTTTCSSSCCCCEEECTTTCCBCCCCHHHHHHHSCCCCHHHHTHHHHT
T ss_pred CeEeecCCcchhhH-HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECCHHHHHHHhhCCCHHHHHHHHHH
Confidence 67788999999999 58999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhchhcCccchhhhHhhhhhhhhHHHHHhhhchhhHHHhhhccccccccCCCCchhHHHHHHHHHHHHHh-hhCCCCH
Q psy16434 251 QMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNL-LRMGLTP 329 (745)
Q Consensus 251 ~~qd~~~GDGt~~~~~~~~~~l~~~~~~~~~~~~~~~~l~v~~~~~q~~~~GDgTTsvVvLa~eLL~~a~~l-i~~gihP 329 (745)
++||+++||| |||+++||++||++|.++ +++|+||
T Consensus 83 ~~qd~e~GDG--------------------------------------------TTtvvVLA~eLL~~a~~l~l~~GihP 118 (590)
T 3p9d_C 83 RTQDEEVGDG--------------------------------------------TTTVIILAGEILAQCAPYLIEKNIHP 118 (590)
T ss_dssp TTHHHHCSSC--------------------------------------------HHHHHHHHHHHHHHHHHHHHSCCCCH
T ss_pred HhhhhhhCCC--------------------------------------------ccchHHHHHHHHhhhHHhhhhcCCCH
Confidence 9999999999 999999999999999999 9999999
Q ss_pred HHHHHHHHHHHHHHHHhcccccccccccCcccccccceeeeccccccCC-ChhhHHHHHHHHHHhhcCCCCC--------
Q psy16434 330 SEIVNGYKLALAKTLEILPTLTCFEVKDVRNVENVTKGIKSAIMSKQYG-NEDFLTDLITKACVSILPDGSS-------- 400 (745)
Q Consensus 330 ~~I~~g~~~a~~~~l~~L~~~s~~~~~~~~~~~~L~~va~tsl~sK~~~-~~~~ls~LivdAv~~v~~~~~~-------- 400 (745)
+.|++||++|++.+++.|++++++ ++..+++.|.++|+|+++||+.+ ++++|++|+++|+.+++++...
T Consensus 119 ~~I~~G~~~A~~~a~~~L~~~s~~--v~~~~~e~L~~vA~tslsSK~~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~ 196 (590)
T 3p9d_C 119 VIIIQALKKALTDALEVIKQVSKP--VDVENDAAMKKLIQASIGTKYVIHWSEKMCELALDAVKTVRKDLGQTVEGEPNF 196 (590)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCT--TTTCCTHHHHHHHTTTSTTSTTGGGHHHHHHHHHHHHTTSTTCC----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhc--cccCCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHhcccccCcccccccc
Confidence 999999999999999999999876 34456788999999999999987 4799999999999999875211
Q ss_pred CCCcc-ceEEEEccCCCcccceeEeeEEEeecccC--CceeeeCceEEEeccCCCccccccC------------------
Q psy16434 401 SFNVD-NVRITKILGSGLFNSEIVQGMVFKRSVEG--DITKQTKAKIAVYTCPVDIATTETK------------------ 459 (745)
Q Consensus 401 ~~dl~-~I~I~ki~Ggs~~dS~lv~G~~l~~~~~~--~~~~i~nakIlil~~~Le~~k~e~k------------------ 459 (745)
.+|++ +|+|+++.|+++.||++++||+|++++.+ ||++++||||++++++||++|++.+
T Consensus 197 ~vDl~~~I~I~ki~Ggs~~ds~lv~Gmvfdk~~~~~~m~~~~en~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E 276 (590)
T 3p9d_C 197 EIDIKRYVRVEKIPGGDVLDSRVLKGVLLNKDVVHPKMSRHIENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIE 276 (590)
T ss_dssp -CCCSSSSCEEEESSCCGGGCBCCSSEEECCCCSCTTSCSCEESCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHH
T ss_pred ccchhhceEEEEecCCCcccceeeeEEEEecccCCCCCcceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHH
Confidence 34554 79999999999999999999999999876 5999999999999999999885421
Q ss_pred ----------------------------------------------------------------CCCCcccccc-cccEE
Q psy16434 460 ----------------------------------------------------------------TPPAASELGY-ADSVA 474 (745)
Q Consensus 460 ----------------------------------------------------------------~~p~a~~LG~-a~~vq 474 (745)
+++++++||+ |++++
T Consensus 277 ~~~l~~~vekI~~~g~~vII~e~~I~d~Al~~L~k~~I~av~~~~k~~le~ia~~TGa~iis~l~~~~~~~LG~~a~~v~ 356 (590)
T 3p9d_C 277 EEQVQLMCEQILAVRPTLVITEKGVSDLAQHYLLKGGCSVLRRVKKSDNNRIARVTGATIVNRVEDLKESDVGTNCGLFK 356 (590)
T ss_dssp HHHHHHHHHHHHTTCCSEECCSSCCCTHHHHHHHHTTCCCCCCCCHHHHHHHHHHHTCCCCSCSTTCCTTSCBCCCSEEE
T ss_pred HHHHHHHHHHHHhcCCcEEEecCCcCHHHHHHHHhccceeeccCCHHHHHHHHHHhCCceeecccCCCHHHhCCcCCEEE
Confidence 7788899999 99999
Q ss_pred EEEECCeeEEEEEecccccce--------------------------------------------------------eEE
Q psy16434 475 VDELGDTAVVVFKLEAAESRI--------------------------------------------------------ATL 498 (745)
Q Consensus 475 ~~eiGdtsvti~~g~~l~~~a--------------------------------------------------------~TI 498 (745)
+..+|++++++|.|+.. +.+ +||
T Consensus 357 ~~~ig~d~~~~i~g~~~-~~~~~~~~~~~~~~~~~k~~~~~~~~~~~i~~r~~~i~~~~~~~~~~~~~~~~~l~ggv~tI 435 (590)
T 3p9d_C 357 VEMIGDEYFSFLDNCKE-PGSGSGWSHPQFEKGSGKRRWKKNFIAVSAANRFKKISSSGALGSGHHHHHHHHGSGKACTI 435 (590)
T ss_dssp CCEETTEECEEECC----------------------------------------------------------CCCSCCCE
T ss_pred EEEEcCcEEEEEeCCCC-ccccccccccccccccchhhhhcchhhHHHHHHHHHHHHHHhccCCHHHHHHHhhcCCeeEE
Confidence 99999999999998865 444 999
Q ss_pred EEcCCchhhHHHHHHHHHHHHHHHHHHHH------------------------------------------HHHHHHHhh
Q psy16434 499 VIRGATENYMDDIERAVDDGVNTFKGITK------------------------------------------VFVKTLAEN 536 (745)
Q Consensus 499 IlrG~t~~IldE~eral~DAL~vlk~~~~------------------------------------------~IPr~LaeN 536 (745)
++||+|+.+++|.+|+++||+++++++++ .+|++||+|
T Consensus 436 ~lrg~te~~l~E~kr~i~DAl~a~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~N 515 (590)
T 3p9d_C 436 MLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGGATEMAVSVKLAEKAKQLEGIQQWPYQAVADAMECIPRTLIQN 515 (590)
T ss_dssp EEECSSTTTHHHHHHHHHHHHHHHHHHHHCCCEECTTTHHHHHHHHHHHHHHHHSCSTTHHHHHHHHHHTTHHHHHHHHT
T ss_pred EEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEeCccHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999997 678999999
Q ss_pred ccchhhHHHHHHHHHhhcCCccceeeecCCCcceeecccccccccccchhhHhhhhhhcchhhccccccee
Q psy16434 537 TGVKSNEVISKLYSAHNEGKKTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAANTILQQTKAKI 607 (745)
Q Consensus 537 AGld~~~vlsKL~~~h~~g~~~~GIDl~~~~ikI~dm~g~gI~Ds~lVkG~vL~~A~e~a~mil~IDn~kI 607 (745)
||+|+.+++++|++.|..+..++|||+.++ .+.||...|||||+.|+..+|+.|++.+.|++++|++..
T Consensus 516 aG~d~~~vv~~l~~~h~~~~~~~G~d~~~g--~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~ 584 (590)
T 3p9d_C 516 AGGDPIRLLSQLRAKHAQGNFTTGIDGDKG--KIVDMVSYGIWEPEVIKQQSVKTAIESACLLLRVDDIVS 584 (590)
T ss_dssp TCSCHHHHHHHHHHHHTTSCTTCBCCTTSS--SCBCTTTTTCCEEHHHHHHHHHHHHHHHHHTTSEEEEEC
T ss_pred cCCCHHHHHHHHHHHHhcCCCCEeEeCCCC--eEeehHHcCCeEcHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999988777899999999 999999999999999999999999999999999998764
No 20
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=3.8e-70 Score=624.34 Aligned_cols=385 Identities=29% Similarity=0.447 Sum_probs=356.3
Q ss_pred eeecccccccccChHHHHHHHHHHHHHHHhhccccccccccceeeec-CCCCeEEecCHHHHHhhccccChhhHHHHHHH
Q psy16434 172 AAIFQYYDKHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVIN-HIDKLFVTNDAATIIRELEIEHPAAKLIILGS 250 (745)
Q Consensus 172 ~~~~~~~~~~~~g~~~a~~~ni~~~~~la~~v~tsLGP~G~~KmIv~-~~g~i~ITnDG~tIlk~l~~~hP~akll~~~s 250 (745)
..+|+++.+..+| ++++.+|+.||.+|+++|+|||||+||||||++ +.|+++|||||+||||+|+++||+|||++++|
T Consensus 3 ~~~l~~~~~~~~g-~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~G~~~iTnDG~tIlk~i~~~hP~Akll~e~a 81 (527)
T 3p9d_B 3 VQIFGDQVTEERA-ENARLSAFVGAIAVGDLVKSTLGPKGMDKLLQSASSNTCMVTNDGATILKSIPLDNPAAKVLVNIS 81 (527)
T ss_dssp CCSSCSCEEEEES-HHHHHHHHHHHHHHHHHHHSCSSSSCCEEEEECTTTCCEECCCCHHHHHHTCCCCCHHHHHHHHHH
T ss_pred eehhcCcchhhhh-HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEecCCCCeEEeCCHHHHHHHhccCCHHHHHHHHHH
Confidence 4568899999999 699999999999999999999999999999999 89999999999999999999999999999999
Q ss_pred hhhhchhcCccchhhhHhhhhhhhhHHHHHhhhchhhHHHhhhccccccccCCCCchhHHHHHHHHHHHHHhhhC-CCCH
Q psy16434 251 QMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRM-GLTP 329 (745)
Q Consensus 251 ~~qd~~~GDGt~~~~~~~~~~l~~~~~~~~~~~~~~~~l~v~~~~~q~~~~GDgTTsvVvLa~eLL~~a~~li~~-gihP 329 (745)
++||+++||| |||+++||++||+++.+++++ |+||
T Consensus 82 ~~qd~~~GDG--------------------------------------------TTtavVLA~~Ll~ea~~lv~~~GihP 117 (527)
T 3p9d_B 82 KVQDDEVGDG--------------------------------------------TTSVTVLSAELLREAEKLIDQSKIHP 117 (527)
T ss_dssp HHHHHHTCSC--------------------------------------------TTTTTHHHHHHHHHHHHHTC---CCH
T ss_pred HHhHhhhCCc--------------------------------------------HhHHHHHHHHHHHHHHHHHHhcCCCH
Confidence 9999999999 999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHHHHHhccccccccccc-CcccccccceeeeccccccCCC-hhhHHHHHHHHHHhhcCCCCCCCCccce
Q psy16434 330 SEIVNGYKLALAKTLEILPTLTCFEVKD-VRNVENVTKGIKSAIMSKQYGN-EDFLTDLITKACVSILPDGSSSFNVDNV 407 (745)
Q Consensus 330 ~~I~~g~~~a~~~~l~~L~~~s~~~~~~-~~~~~~L~~va~tsl~sK~~~~-~~~ls~LivdAv~~v~~~~~~~~dl~~I 407 (745)
+.|++||++|++.+++.|++++++...+ ..+++.|.++|+||++||++++ +++|++|+++|+.+++++ + |++.|
T Consensus 118 ~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~vA~tSl~sK~~~~~~~~i~~li~dAv~~V~~~--~--~~~~I 193 (527)
T 3p9d_B 118 QTIIEGYRLASAAALDALTKAAVDNSHDKTMFREDLIHIAKTTLSSKILSQDKDHFAELATNAILRLKGS--T--NLEHI 193 (527)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCBCCCCCHHHHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHTTCTT--C--CTTSS
T ss_pred HHHHHHHHHHHHHHHHHHHHhCccCCCcchhhHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHhccc--C--CcceE
Confidence 9999999999999999999998773211 0126889999999999999985 689999999999999865 2 67789
Q ss_pred EEEEccCCCcccceeEeeEEEeecccCC-ceeeeCceEEEeccCCCcccccc-C--------------------------
Q psy16434 408 RITKILGSGLFNSEIVQGMVFKRSVEGD-ITKQTKAKIAVYTCPVDIATTET-K-------------------------- 459 (745)
Q Consensus 408 ~I~ki~Ggs~~dS~lv~G~~l~~~~~~~-~~~i~nakIlil~~~Le~~k~e~-k-------------------------- 459 (745)
+|+++.|+++.||++++||+|++++.++ |++++||||++++++||+++++. +
T Consensus 194 ~V~k~~gg~~~ds~lv~G~~~dk~~~~~~p~~~~n~kIlll~~~le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l 273 (527)
T 3p9d_B 194 QIIKILGGKLSDSFLDEGFILAKKFGNNQPKRIENAKILIANTTLDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKI 273 (527)
T ss_dssp CCCBCCCSSSSCCCEESSCCCSCCCSSSCCSCCSSCEEEEECSCSSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCCccccEEEEeEEEecccCCCCCeeeecceEEEeccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999987 89999999999999999987751 1
Q ss_pred --------------------------------------------------------CCCCcccccccccEEEEEECCeeE
Q psy16434 460 --------------------------------------------------------TPPAASELGYADSVAVDELGDTAV 483 (745)
Q Consensus 460 --------------------------------------------------------~~p~a~~LG~a~~vq~~eiGdtsv 483 (745)
++++++.||+|+.+++.++|++++
T Consensus 274 ~~I~~~g~~vvi~~~~I~~~al~~L~~~~i~av~~~~~~dle~ia~~tGa~iv~~~~~~~~~~LG~a~~v~~~~ig~~~~ 353 (527)
T 3p9d_B 274 AKISKFGINTFINRQLIYDYPEQLFTDLGINSIEHADFEGVERLALVTGGEVVSTFDEPSKCKLGECDVIEEIMLGEQPF 353 (527)
T ss_dssp HHHTTTCCBEEESSCCCTTTHHHHHHHTCBCCCCCCHHHHHHHHHHHTCCCCCSTTSCCTTSCEECSBCCBCCCSSSCCB
T ss_pred HHHHhcCCCEEEECCCCCHHHHHHHHHCCCEEEecCCHHHHHHHHHHhCCEEecchhhCCHHHCCCCcEEEEEEecceEE
Confidence 678889999999999999999999
Q ss_pred EEEEecccccceeEEEEcCCchhhHHHHHHHHHHHHHHHHHHHH------------------------------------
Q psy16434 484 VVFKLEAAESRIATLVIRGATENYMDDIERAVDDGVNTFKGITK------------------------------------ 527 (745)
Q Consensus 484 ti~~g~~l~~~a~TIIlrG~t~~IldE~eral~DAL~vlk~~~~------------------------------------ 527 (745)
++|.|+.. ++++||++||+|+.+++|.+|+++||+++++++++
T Consensus 354 ~~~~g~~~-~~~~tI~lrg~te~~l~E~kr~i~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~ 432 (527)
T 3p9d_B 354 LKFSGCKA-GEACTIVLRGATDQTLDEAERSLHDALSVLSQTTKETRTVLGGGCAEMVMSKAVDTEAQNIDGKKSLAVEA 432 (527)
T ss_dssp CCBCSSCC-SCCEECBCCTTCTTHHHHHHTHHHHHHHHHHHHHHCCCEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHH
T ss_pred EEEECCCC-CCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCcHHHHHHHHHHHHHHhccCcHHHHHHHH
Confidence 99999986 88999999999999999999999999999999987
Q ss_pred ------HHHHHHHhhccchhhHHHHHHHHHhhcCCccceeeecCCCcceeecccccccccccchhhHhhhhhhcchhhcc
Q psy16434 528 ------VFVKTLAENTGVKSNEVISKLYSAHNEGKKTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAANTILQ 601 (745)
Q Consensus 528 ------~IPr~LaeNAGld~~~vlsKL~~~h~~g~~~~GIDl~~~~ikI~dm~g~gI~Ds~lVkG~vL~~A~e~a~mil~ 601 (745)
.+|++|++|||+|+.+++++|++.|.++..++|||+.++ .+.||...|||||+.|+..+++.|++.+.|+++
T Consensus 433 ~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g--~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~ 510 (527)
T 3p9d_B 433 FARALRQLPTILADNAGFDSSELVSKLRSSIYNGISTSGLDLNNG--TIADMRQLGIVESYKLKRAVVSSASEAAEVLLR 510 (527)
T ss_dssp HHHHHHHHHHHHHHHHTSCSHHHHHHHHHHHHHTCSCCCCCSSST--TCCCHHHHTCEEETTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCceeEECCCC--CCcchHhccCEEcHHHHHHHHHHHHHHHHHHHh
Confidence 578999999999999999999999987777899999999 999999999999999999999999999999999
Q ss_pred cccceee
Q psy16434 602 QTKAKIA 608 (745)
Q Consensus 602 IDn~kIl 608 (745)
+|++...
T Consensus 511 id~ii~~ 517 (527)
T 3p9d_B 511 VDNIIRA 517 (527)
T ss_dssp CCEEEEE
T ss_pred HHHHHhc
Confidence 9988664
No 21
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=5.8e-70 Score=625.03 Aligned_cols=388 Identities=21% Similarity=0.354 Sum_probs=356.8
Q ss_pred eecccccccccChHHHHHHHHHHHHHHHhhccccccccccceeeecCCCCeEEecCHHHHHhhccccChhhHHHHHHHhh
Q psy16434 173 AIFQYYDKHFSGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHPAAKLIILGSQM 252 (745)
Q Consensus 173 ~~~~~~~~~~~g~~~a~~~ni~~~~~la~~v~tsLGP~G~~KmIv~~~g~i~ITnDG~tIlk~l~~~hP~akll~~~s~~ 252 (745)
.++.++++..+| .+++.+||.||.+|+++|+|||||+||||||+++.|+++|||||+||||+|+++||+|||++++|++
T Consensus 4 ~~~~~~~~~~~g-~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~e~a~~ 82 (546)
T 3p9d_F 4 QLLNPKAESLRR-DAALKVNVTSAEGLQSVLETNLGPKGTLKMLVDGAGNIKLTKDGKVLLTEMQIQSPTAVLIARAAAA 82 (546)
T ss_dssp CSSCTTEEEEEH-HHHHHHHHHHHTHHHHHHTTTSSTTCCEEEEECTTSCEEEECCHHHHHHTSCCCCHHHHHHHHHHHH
T ss_pred cccCCCcchhhH-HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHHHH
Confidence 456778888888 5899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhchhcCccchhhhHhhhhhhhhHHHHHhhhchhhHHHhhhccccccccCCCCchhHHHHHHHHHHHHHhhhCCCCHHHH
Q psy16434 253 QEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTPSEI 332 (745)
Q Consensus 253 qd~~~GDGt~~~~~~~~~~l~~~~~~~~~~~~~~~~l~v~~~~~q~~~~GDgTTsvVvLa~eLL~~a~~li~~gihP~~I 332 (745)
||+++||| |||+|+||++||++|.+++++|+||+.|
T Consensus 83 qd~e~GDG--------------------------------------------TTtvvVLA~eLL~~a~~li~~GihP~~I 118 (546)
T 3p9d_F 83 QDEITGDG--------------------------------------------TTTVVCLVGELLRQAHRFIQEGVHPRII 118 (546)
T ss_dssp HHHHCSSC--------------------------------------------HHHHHHHHHHHHHHHHHHTTTTBCHHHH
T ss_pred HHHHhCCC--------------------------------------------cccHHHHHHHHHHHHHHHHhCCCChHHH
Confidence 99999999 9999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccccccccCcccccccceeeeccccccCC-ChhhHHHHHHHHHHhhcCCCCCCCCccceEEEE
Q psy16434 333 VNGYKLALAKTLEILPTLTCFEVKDVRNVENVTKGIKSAIMSKQYG-NEDFLTDLITKACVSILPDGSSSFNVDNVRITK 411 (745)
Q Consensus 333 ~~g~~~a~~~~l~~L~~~s~~~~~~~~~~~~L~~va~tsl~sK~~~-~~~~ls~LivdAv~~v~~~~~~~~dl~~I~I~k 411 (745)
++||++|++.+++.|++++++...+..+++.|.++|+|+++||+.+ +.++|++++++|+..+.+..+..+|+++|+|++
T Consensus 119 ~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~L~~vA~tsl~sKi~~~~~d~la~l~vdaV~~V~~~~~~~~dl~~I~i~k 198 (546)
T 3p9d_F 119 TDGFEIARKESMKFLDEFKISKTNLSNDREFLLQVARSSLLTKVDADLTEVLTPIVTDAVLSVYDAQADNLDLHMVEIMQ 198 (546)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCSSSSTTCHHHHHHHHHHTCSTTHHHHCSSHHHHHHHHHHHTHHHHHTTCCGGGEEEEC
T ss_pred HHHHHHHHHHHHHHHHHhhccccccccCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhheEeecCCCCcccchheEEEE
Confidence 9999999999999999999874333357889999999999999886 479999999999998864323468999999999
Q ss_pred ccCCCcccceeEeeEEEeecccC--CceeeeCceEEEeccCCCcccccc-------------------------------
Q psy16434 412 ILGSGLFNSEIVQGMVFKRSVEG--DITKQTKAKIAVYTCPVDIATTET------------------------------- 458 (745)
Q Consensus 412 i~Ggs~~dS~lv~G~~l~~~~~~--~~~~i~nakIlil~~~Le~~k~e~------------------------------- 458 (745)
+.|++..||++++||+|++++.+ ||++++||||++++++||+.+++.
T Consensus 199 i~Gg~~~ds~lv~G~v~dk~~~~~~m~~~~en~kIll~~~~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~ 278 (546)
T 3p9d_F 199 MQHLSPKDTTFIKGLVLDHGGRHPDMPTRVKNAYVLILNVSLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKII 278 (546)
T ss_dssp CCCSCTTTCCCCSSCEESCCCCSSSSCSSBCSCCCCEECCCSSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCccccEEEeeEEEecccccccCcceecCceEEEecCcccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999987 599999999999999998776321
Q ss_pred --------------------C-----------------------------------------CCCCcccccccccEEEEE
Q psy16434 459 --------------------K-----------------------------------------TPPAASELGYADSVAVDE 477 (745)
Q Consensus 459 --------------------k-----------------------------------------~~p~a~~LG~a~~vq~~e 477 (745)
+ ++++++.||+|+++++..
T Consensus 279 ~~~~~v~~~~~g~~~vIi~~k~I~~~Al~~L~~~gI~~vr~v~~~~leria~~tGa~ii~~l~~l~~~~LG~a~~v~~~~ 358 (546)
T 3p9d_F 279 DLKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKHNILALRRAKRRNMERLQLVTGGEAQNSVEDLSPQILGFSGLVYQET 358 (546)
T ss_dssp HCC-----------CEEEESSCCCHHHHHHHTTTTCEEECCCCHHHHHHHHHTTTBCCCCCCSSCSTTCCBCCCCBCBCC
T ss_pred HHHHHHhhhccCCceEEEecCcCcHHHHHHHHHCCCeeEecCCHHHHHHHHHHhCCEEecchhhCCHhHCCcccEEEEEE
Confidence 0 678889999999999999
Q ss_pred ECCeeEEEEEecccccceeEEEEcCCchhhHHHHHHHHHHHHHHHHHHHH------------------------------
Q psy16434 478 LGDTAVVVFKLEAAESRIATLVIRGATENYMDDIERAVDDGVNTFKGITK------------------------------ 527 (745)
Q Consensus 478 iGdtsvti~~g~~l~~~a~TIIlrG~t~~IldE~eral~DAL~vlk~~~~------------------------------ 527 (745)
+|++++++|+|+.. +.++||++||+|+.+++|.+|+++||+++++++++
T Consensus 359 ig~~~~~~i~g~~~-~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~~~~ 437 (546)
T 3p9d_F 359 IGEEKFTYVTENTD-PKSCTILIKGSTHYALAQTKDAVRDGLRAVANVLKDKNIIPGAGAFYIALSRYLRSANMNKLGAK 437 (546)
T ss_dssp CSSCCCEECSSCSC-CSCEEEECCCSCHHHHHHHHHHHHHHHHHHHHHTTSCCEEETTTHHHHHHHHHHHHHHTTTTTTT
T ss_pred ecCceEEEEecCCC-CceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhhhhhhcCc
Confidence 99999999999987 88999999999999999999999999999998876
Q ss_pred ---------------HHHHHHHhhccchhhHHHHHHHHHhhc-----CCccceeeecCCCcceeecccccccccccchhh
Q psy16434 528 ---------------VFVKTLAENTGVKSNEVISKLYSAHNE-----GKKTYGFDINGENSSVIDAAEAGILDLYLTKMW 587 (745)
Q Consensus 528 ---------------~IPr~LaeNAGld~~~vlsKL~~~h~~-----g~~~~GIDl~~~~ikI~dm~g~gI~Ds~lVkG~ 587 (745)
.+|++|++|||+|+.+++++|++.|.. +..++|||+.++ ++.||...|||||+.|+..
T Consensus 438 g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~G~d~~~g--~~~d~~~~gI~dp~~vk~~ 515 (546)
T 3p9d_F 438 GKTKTGIEAFAEALLVIPKTLVKNSGFDPLDVLAMVEDELDDAQDSDETRYVGVDLNIG--DSCDPTIEGIWDSYRVLRN 515 (546)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHHTTSTTSSCCCCBTTTT--BCCCSGGGTCEEEHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhhcccCCceeeEeCCCC--eecchHhccCEecHHHHHH
Confidence 468999999999999999999998873 445789999999 9999999999999999999
Q ss_pred Hhhhhhhcchhhcccccceee
Q psy16434 588 ALKYATSAANTILQQTKAKIA 608 (745)
Q Consensus 588 vL~~A~e~a~mil~IDn~kIl 608 (745)
+|+.|++.+.|+++||++..+
T Consensus 516 al~~A~~~a~~iL~iD~ii~~ 536 (546)
T 3p9d_F 516 AITGATGIASNLLLCDELLRA 536 (546)
T ss_dssp HHHHHHHHHHHHHTEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999998764
No 22
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=5.6e-61 Score=545.38 Aligned_cols=345 Identities=28% Similarity=0.444 Sum_probs=273.2
Q ss_pred eeecCCCCeEEecCHHHHHhhccccChhhHHHHHHHhhhhchhcCccchhhhHhhhhhhhhHHHHHhhhchhhHHHhhhc
Q psy16434 215 IVINHIDKLFVTNDAATIIRELEIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGS 294 (745)
Q Consensus 215 mIv~~~g~i~ITnDG~tIlk~l~~~hP~akll~~~s~~qd~~~GDGt~~~~~~~~~~l~~~~~~~~~~~~~~~~l~v~~~ 294 (745)
||+++.|+++|||||+||||+|+++||+|||++++|++||+++|||
T Consensus 1 mlv~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDG---------------------------------- 46 (500)
T 3aq1_B 1 MLVDSMGDIVITNDGATILKEMDIQHPAAKMIVEVSKTQDAEVGDG---------------------------------- 46 (500)
T ss_dssp ------------------------------------------CCHH----------------------------------
T ss_pred CccCCCCCeEEECcHHHHHHhCcCCCHHHHHHHHHHHhhhhhhCCC----------------------------------
Confidence 7899999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCchhHHHHHHHHHHHHHhhhCCCCHHHHHHHHHHHHHHHHHhcccccccccccCcccccccceeeecccc
Q psy16434 295 QMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTPSEIVNGYKLALAKTLEILPTLTCFEVKDVRNVENVTKGIKSAIMS 374 (745)
Q Consensus 295 ~~q~~~~GDgTTsvVvLa~eLL~~a~~li~~gihP~~I~~g~~~a~~~~l~~L~~~s~~~~~~~~~~~~L~~va~tsl~s 374 (745)
|||+++||++||+++.+++++|+||+.|++||++|++.+++.|++++++. +..+++.|.++|+|+++|
T Consensus 47 ----------TTtvvvLa~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v--~~~d~~~l~~va~tsl~s 114 (500)
T 3aq1_B 47 ----------TTTAAVLSGELLSKAEELIMKGVHSTIISEGYRHAAEKCREILETITIAI--SPDDEAALIKIAGTAITG 114 (500)
T ss_dssp ----------HHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEEC--CTTCHHHHHHHHHTTCCS
T ss_pred ----------hHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCC--CCCcHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999998873 334688999999999999
Q ss_pred ccCC-ChhhHHHHHHHHHHhhcCCCCC--CCC-ccceEEEEccCCCcccceeEeeEEEeecccC--CceeeeCceEEEec
Q psy16434 375 KQYG-NEDFLTDLITKACVSILPDGSS--SFN-VDNVRITKILGSGLFNSEIVQGMVFKRSVEG--DITKQTKAKIAVYT 448 (745)
Q Consensus 375 K~~~-~~~~ls~LivdAv~~v~~~~~~--~~d-l~~I~I~ki~Ggs~~dS~lv~G~~l~~~~~~--~~~~i~nakIlil~ 448 (745)
|+.+ ++++|++|+++|+.+++++.++ .+| +++|+|+++.|++++||++++||+|++++.| +|++++||||++++
T Consensus 115 Ki~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~i~n~kIll~~ 194 (500)
T 3aq1_B 115 KGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKRAGGSIDDSELIDGLVIDKERSHPNMPEKVENAKILLLS 194 (500)
T ss_dssp SSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEEESSCGGGCEEESEEEESCCCSSTTSCSEEEEEEEEEES
T ss_pred ccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEEecCCCccceEEEeeeEEeecCCCCCCcccccCCEEEEEe
Confidence 9998 5899999999999999865222 467 7889999999999999999999999999976 59999999999999
Q ss_pred cCCCccccccC---------------------------------------------------------------------
Q psy16434 449 CPVDIATTETK--------------------------------------------------------------------- 459 (745)
Q Consensus 449 ~~Le~~k~e~k--------------------------------------------------------------------- 459 (745)
++||+.+++.+
T Consensus 195 ~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~ 274 (500)
T 3aq1_B 195 CPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMREMAEKVIASGANVVFCQKGIDDMAQYYIEKAGIYAVRRVKKSDLKR 274 (500)
T ss_dssp SCBCC-------------------------CHHHHHHHHHHTTCCSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHH
T ss_pred CCccccccccceeEeeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEECCCcCHHHHHHHHHCCEEEEEeCCHHHHHH
Confidence 99998876531
Q ss_pred -------------CCCCcccccccccEEEEEECCeeEEEEEecccccceeEEEEcCCchhhHHHHHHHHHHHHHHHHHHH
Q psy16434 460 -------------TPPAASELGYADSVAVDELGDTAVVVFKLEAAESRIATLVIRGATENYMDDIERAVDDGVNTFKGIT 526 (745)
Q Consensus 460 -------------~~p~a~~LG~a~~vq~~eiGdtsvti~~g~~l~~~a~TIIlrG~t~~IldE~eral~DAL~vlk~~~ 526 (745)
++++++.||+|+++++.++|++++++|.|+.. ++++||++||+|+.+++|.+|+++||++++++++
T Consensus 275 ia~~tGa~iis~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~-~~~~TI~lrG~t~~~l~E~er~l~Dal~~~r~~~ 353 (500)
T 3aq1_B 275 LSKVTGATIIQDLDQITTEDVGTAGLVEEKEVRGGKMTYVTGCQN-SKAVTVLLHGGTEHVVDSLDHALNDALHVVGVVI 353 (500)
T ss_dssp HHHHHCCCCBSCTTCCCSTTCEEEEEEEEEECSSSEEEEEEEETT-CCCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCeEecccccCCHhHCCCceEEEEEEecCeEEEEEECCCC-CceEEEEecCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 77888999999999999999999999999987 8899999999999999999999999999999998
Q ss_pred H------------------------------------------HHHHHHHhhccchhhHHHHHHHHHhhcCCccceeeec
Q psy16434 527 K------------------------------------------VFVKTLAENTGVKSNEVISKLYSAHNEGKKTYGFDIN 564 (745)
Q Consensus 527 ~------------------------------------------~IPr~LaeNAGld~~~vlsKL~~~h~~g~~~~GIDl~ 564 (745)
+ .+|++|++|||+|+.+++++|++.|.++..++|+|+.
T Consensus 354 ~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~ 433 (500)
T 3aq1_B 354 EDGKVVVGGGSSEVELSLRLSEYASTLKGREQLAVSKFAEALEVIPVALAENAGLDPIDIMVELRSQHEKGNKNAGLNVY 433 (500)
T ss_dssp HHSEEEETTTHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHTTCTTEEECTT
T ss_pred HCCCCCCCCcHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhcCCCCCeeEeCC
Confidence 7 6799999999999999999999999877778999999
Q ss_pred CCCcceeecccccccccccchhhHhhhhhhcchhhcccccceee
Q psy16434 565 GENSSVIDAAEAGILDLYLTKMWALKYATSAANTILQQTKAKIA 608 (745)
Q Consensus 565 ~~~ikI~dm~g~gI~Ds~lVkG~vL~~A~e~a~mil~IDn~kIl 608 (745)
++ .+.||...|||||+.|+..+++.|++.+.|++++|++...
T Consensus 434 ~g--~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~iI~~ 475 (500)
T 3aq1_B 434 TG--EVVDMWENDVIEPLRIKTQAINAAMEATVMILRIDDVVAS 475 (500)
T ss_dssp TC--CEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHCC------
T ss_pred CC--CccchHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99 9999999999999999999999999999999999997654
No 23
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=7.2e-60 Score=539.93 Aligned_cols=353 Identities=21% Similarity=0.300 Sum_probs=315.8
Q ss_pred HHHHHHHHHHHHHHHhhccccccccccceeeecCCCCeEEecCHHHHHhhccccCh----hhHHHHHHHhhhhchhcCcc
Q psy16434 186 EEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHP----AAKLIILGSQMQEEEMGDGT 261 (745)
Q Consensus 186 ~~a~~~ni~~~~~la~~v~tsLGP~G~~KmIv~~~g~i~ITnDG~tIlk~l~~~hP----~akll~~~s~~qd~~~GDGt 261 (745)
++++.+|++||..|+++|+|||||+||||||++++|+++|||||+||||+|+++|| +|||++++|++||+++|||
T Consensus 10 ~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e~GDG- 88 (545)
T 1iok_A 10 SDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRTNDEAGDG- 88 (545)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHGGGGCSTH-
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEECCCCCeEEeCCHHHHHHHhccCChhhHHHHHHHHHHHHhhccccCCC-
Confidence 68999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chhhhHhhhhhhhhHHHHHhhhchhhHHHhhhccccccccCCCCchhHHHHHHHHHHHHHhhhCCCCHHHHHHHHHHHHH
Q psy16434 262 NFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTPSEIVNGYKLALA 341 (745)
Q Consensus 262 ~~~~~~~~~~l~~~~~~~~~~~~~~~~l~v~~~~~q~~~~GDgTTsvVvLa~eLL~~a~~li~~gihP~~I~~g~~~a~~ 341 (745)
|||+++||++||+++.+++++|+||+.|++||++|++
T Consensus 89 -------------------------------------------TTtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~ 125 (545)
T 1iok_A 89 -------------------------------------------TTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATA 125 (545)
T ss_dssp -------------------------------------------HHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred -------------------------------------------cchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999
Q ss_pred HHHHhcccccccccccCcccccccceeeeccccccCCChhhHHHHHHHHHHhhcCCCCCCCCccceEEEEccCCCcccc-
Q psy16434 342 KTLEILPTLTCFEVKDVRNVENVTKGIKSAIMSKQYGNEDFLTDLITKACVSILPDGSSSFNVDNVRITKILGSGLFNS- 420 (745)
Q Consensus 342 ~~l~~L~~~s~~~~~~~~~~~~L~~va~tsl~sK~~~~~~~ls~LivdAv~~v~~~~~~~~dl~~I~I~ki~Ggs~~dS- 420 (745)
.+++.|++++.+. .+++.|.++|++++++ +++|++|+++|+.+++++ +. |+|+ .|+++++|
T Consensus 126 ~a~~~L~~~s~~v----~~~e~l~~va~iS~~~-----~~~i~~li~dAv~~V~~~--g~-----I~Ve--~G~~~~ds~ 187 (545)
T 1iok_A 126 KVVEAIKSAARPV----NDSSEVAQVGTISANG-----ESFIGQQIAEAMQRVGNE--GV-----ITVE--ENKGMETEV 187 (545)
T ss_dssp HHHHHHHTTCBCC----CSTTTTTHHHHHTTTT-----CHHHHHHHHHHHHHHCTT--SC-----CCCE--ECSSSCCEE
T ss_pred HHHHHHHHhcccC----CCHHHHHHHHHhhcCC-----chhHHHHHHHHHHHhccC--Ce-----EEEE--eCCccccce
Confidence 9999999998773 3578899999988763 689999999999999865 33 5554 79999999
Q ss_pred eeEeeEEEeecccC---------CceeeeCceEEEeccCCCccccccC--------------------------------
Q psy16434 421 EIVQGMVFKRSVEG---------DITKQTKAKIAVYTCPVDIATTETK-------------------------------- 459 (745)
Q Consensus 421 ~lv~G~~l~~~~~~---------~~~~i~nakIlil~~~Le~~k~e~k-------------------------------- 459 (745)
++++||+|++++.+ ++++++|||||+++++++..+.-..
T Consensus 188 ~lveG~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~I~~~~~l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~i 267 (545)
T 1iok_A 188 EVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSSLQPMVPLLESVIQSQKPLLIVAEDVEGEALATLVVNKL 267 (545)
T ss_dssp EEECCEECSCCCSCGGGCCCSSSSCEEEEEEEEEECSSCBCCCCC-----------CCCCEEEESCBC------------
T ss_pred EEEecEEEecCccccccccCcccCceeecCCeEEEEcCCcCCHHHHHHHHHHHHhcCCCEEEECCCcCHHHHHHHHHccc
Confidence 99999999999876 4667999999999998775433100
Q ss_pred ------------------------------------------CCCCcccccccccEEEEEECCeeEEEEEeccc------
Q psy16434 460 ------------------------------------------TPPAASELGYADSVAVDELGDTAVVVFKLEAA------ 491 (745)
Q Consensus 460 ------------------------------------------~~p~a~~LG~a~~vq~~eiGdtsvti~~g~~l------ 491 (745)
+++++++||+|+++++ +++++++|.|+..
T Consensus 268 rg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~a~~v~~---~~~~~~~i~g~~~~~~i~~ 344 (545)
T 1iok_A 268 RGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAKKVSI---NKDNTTIVDGAGEKAEIEA 344 (545)
T ss_dssp -----CEEEECSCCTTHHHHHHHHHHHHHTC---------------CTTSEEEEEEEE---CSSCEEEESCCCCHHHHHH
T ss_pred cccceeEEEecchhhhccHHHHHHHHHhcCCeeecccccCCcccCCHHHcCcCcEEEE---ecCEEEEEeCCCCHHHHHH
Confidence 4456778999999965 5699999998763
Q ss_pred ----------------------------ccceeEEEEcCCchhhHHHHHHHHHHHHHHHHHHHH----------------
Q psy16434 492 ----------------------------ESRIATLVIRGATENYMDDIERAVDDGVNTFKGITK---------------- 527 (745)
Q Consensus 492 ----------------------------~~~a~TIIlrG~t~~IldE~eral~DAL~vlk~~~~---------------- 527 (745)
+++++||++||+|+.+++|.+|+++||+++++++++
T Consensus 345 r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~giVpGGGa~e~~~s~ 424 (545)
T 1iok_A 345 RVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEGIVVGGGVALVQGAK 424 (545)
T ss_dssp HHHHHHHHHTTCCCSSHHHHHHHHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHGG
T ss_pred HHHHHHHHHhccCchhhHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCCCCchHHHHHHHH
Confidence 247899999999999999999999999999999987
Q ss_pred ------------------------HHHHHHHhhccchhhHHHHHHHHHhhcCCccceeeecCCCcceeeccccccccccc
Q psy16434 528 ------------------------VFVKTLAENTGVKSNEVISKLYSAHNEGKKTYGFDINGENSSVIDAAEAGILDLYL 583 (745)
Q Consensus 528 ------------------------~IPr~LaeNAGld~~~vlsKL~~~h~~g~~~~GIDl~~~~ikI~dm~g~gI~Ds~l 583 (745)
.+|++|++|||+|+.+++++|++.| ..++|||+.++ ++.||...|||||+.
T Consensus 425 ~L~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~~---~~~~G~d~~~g--~~~dm~~~gI~dp~~ 499 (545)
T 1iok_A 425 VLEGLSGANSDQDAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESS---DKAFGFNAQTE--EYGDMFKFGVIDPAK 499 (545)
T ss_dssp GGGSCCCSSHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHSCC---STTEEEETTTT--EEEEHHHHTCEEEHH
T ss_pred HHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhc---CCCeeEeCCCC--cccchHhcCcEEccH
Confidence 6789999999999999999999765 35789999999 999999999999999
Q ss_pred chhhHhhhhhhcchhhcccccceee
Q psy16434 584 TKMWALKYATSAANTILQQTKAKIA 608 (745)
Q Consensus 584 VkG~vL~~A~e~a~mil~IDn~kIl 608 (745)
|+..+++.|++.+.|++++|++...
T Consensus 500 vk~~al~~A~~~A~~iL~id~iI~~ 524 (545)
T 1iok_A 500 VVRTALEDAASVAGLLITTEAMIAE 524 (545)
T ss_dssp HHHHHHHHHHHHHHHHHTEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhHHHhhcc
Confidence 9999999999999999999986553
No 24
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=1.1e-59 Score=538.58 Aligned_cols=352 Identities=19% Similarity=0.259 Sum_probs=318.1
Q ss_pred HHHHHHHHHHHHHHHhhccccccccccceeeecCCCCeEEecCHHHHHhhccccCh----hhHHHHHHHhhhhchhcCcc
Q psy16434 186 EEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHP----AAKLIILGSQMQEEEMGDGT 261 (745)
Q Consensus 186 ~~a~~~ni~~~~~la~~v~tsLGP~G~~KmIv~~~g~i~ITnDG~tIlk~l~~~hP----~akll~~~s~~qd~~~GDGt 261 (745)
++++.+|++||..|+++|+|||||+||||||++++|+++|||||+||||+|+++|| +|||++++|++||+++|||
T Consensus 9 ~~ar~~~~~~~~~la~~vkttLGPkG~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e~GDG- 87 (543)
T 1we3_A 9 EAARRALERGVNAVANAVKVTLGPRGRNVVLEKKFGSPTITKDGVTVAKEVELEDHLENIGAQLLKEVASKTNDVAGDG- 87 (543)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHHHHSSC-
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHcccCChHHhHHHHHHHHHHHhhheecCCC-
Confidence 68999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chhhhHhhhhhhhhHHHHHhhhchhhHHHhhhccccccccCCCCchhHHHHHHHHHHHHHhhhCCCCHHHHHHHHHHHHH
Q psy16434 262 NFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTPSEIVNGYKLALA 341 (745)
Q Consensus 262 ~~~~~~~~~~l~~~~~~~~~~~~~~~~l~v~~~~~q~~~~GDgTTsvVvLa~eLL~~a~~li~~gihP~~I~~g~~~a~~ 341 (745)
|||+++||++||+++.+++++|+||+.|++||++|++
T Consensus 88 -------------------------------------------TTtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~ 124 (543)
T 1we3_A 88 -------------------------------------------TTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVE 124 (543)
T ss_dssp -------------------------------------------HHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred -------------------------------------------cchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999
Q ss_pred HHHHhcccccccccccCcccccccceeeeccccccCCChhhHHHHHHHHHHhhcCCCCCCCCccceEEEEccCCCcccc-
Q psy16434 342 KTLEILPTLTCFEVKDVRNVENVTKGIKSAIMSKQYGNEDFLTDLITKACVSILPDGSSSFNVDNVRITKILGSGLFNS- 420 (745)
Q Consensus 342 ~~l~~L~~~s~~~~~~~~~~~~L~~va~tsl~sK~~~~~~~ls~LivdAv~~v~~~~~~~~dl~~I~I~ki~Ggs~~dS- 420 (745)
.+++.|++++.+. .+++.|.++|+++++ +++|++|+++|+.+++++ + .|+|+ .|+++++|
T Consensus 125 ~a~~~L~~~s~~v----~~~~~l~~vA~iS~~------~~~i~~li~dAv~~V~~~--g-----~I~Ve--~G~~~~ds~ 185 (543)
T 1we3_A 125 AAVEKIKALAIPV----EDRKAIEEVATISAN------DPEVGKLIADAMEKVGKE--G-----IITVE--ESKSLETEL 185 (543)
T ss_dssp HHHHHHHHTCBCC----CSHHHHHHHHHHHHT------CHHHHHHHHHHHHTTCTT--S-----EEEEE--ECSSSSCEE
T ss_pred HHHHHHHHhcccC----CCHHHHHHhhhhhcC------CHHHHHHHHHHHHHhCcC--C-----cEEEe--cCCccccce
Confidence 9999999998773 367889999998886 488999999999999754 2 26676 79999998
Q ss_pred eeEeeEEEeecccC---------CceeeeCceEEEeccCCCcccccc---------C-----------------------
Q psy16434 421 EIVQGMVFKRSVEG---------DITKQTKAKIAVYTCPVDIATTET---------K----------------------- 459 (745)
Q Consensus 421 ~lv~G~~l~~~~~~---------~~~~i~nakIlil~~~Le~~k~e~---------k----------------------- 459 (745)
++++||+|++++.+ ++++++||+||+++++++..+.-. +
T Consensus 186 ~lv~G~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~Is~~~~l~~~le~i~~~g~~lvii~~~I~~~Al~~L~~n~i 265 (543)
T 1we3_A 186 KFVEGYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKL 265 (543)
T ss_dssp EEECSEEESCCBSSGGGCSBTTTTBCCEEEEEEEEESSCBCCHHHHHHHHHHHHTTTCCEEEEESCBCHHHHHHHHHHHH
T ss_pred EEEcCEEEecCccccccccCcccCceeecCceEEEECCCcCCHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHhcc
Confidence 99999999999876 356799999999999876433200 0
Q ss_pred ------------------------------------------CCCCcccccccccEEEEEECCeeEEEEEeccc------
Q psy16434 460 ------------------------------------------TPPAASELGYADSVAVDELGDTAVVVFKLEAA------ 491 (745)
Q Consensus 460 ------------------------------------------~~p~a~~LG~a~~vq~~eiGdtsvti~~g~~l------ 491 (745)
+++++++||+|+++++ +++++++|.|+..
T Consensus 266 rg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~a~~v~~---~~~~~~~i~g~~~~~~i~~ 342 (543)
T 1we3_A 266 RGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRI---TKDETTIVGGKGKKEDIEA 342 (543)
T ss_dssp HTSCCEEEEECSSSHHHHHHHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEEEEEEEE---CSSCEEEEEECCCHHHHHH
T ss_pred ccceeEEEEeccchhhhhHHHHHHHHHHhCCceeeccccCCcccCCHHHCCCceEEEE---EcCEEEEEcCCCCHHHHHH
Confidence 3456778999999965 5699999998763
Q ss_pred ----------------------------ccceeEEEEcCCchhhHHHHHHHHHHHHHHHHHHHH----------------
Q psy16434 492 ----------------------------ESRIATLVIRGATENYMDDIERAVDDGVNTFKGITK---------------- 527 (745)
Q Consensus 492 ----------------------------~~~a~TIIlrG~t~~IldE~eral~DAL~vlk~~~~---------------- 527 (745)
+++++||++||+|+.+++|.+|+++||+++++++++
T Consensus 343 r~~~i~~~~~~~~s~~~~e~l~erlakl~~~~~tI~lrG~te~~l~E~~r~i~DAl~~~r~av~~giVpGGGa~e~~~s~ 422 (543)
T 1we3_A 343 RINGIKKELETTDSEYAREKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDALNATRAAVEEGIVPGGGVTLLRAIS 422 (543)
T ss_dssp HHHHHHHHHTTCCSHHHHHHHHHHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHHH
T ss_pred HHHHHHHHhhccCchhHHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCccHHHHHHHH
Confidence 237899999999999999999999999999999987
Q ss_pred -------------------------HHHHHHHhhccchhhHHHHHHHHHhhcCCccceeeecCCCcceeecccccccccc
Q psy16434 528 -------------------------VFVKTLAENTGVKSNEVISKLYSAHNEGKKTYGFDINGENSSVIDAAEAGILDLY 582 (745)
Q Consensus 528 -------------------------~IPr~LaeNAGld~~~vlsKL~~~h~~g~~~~GIDl~~~~ikI~dm~g~gI~Ds~ 582 (745)
.+|++|++|||+|+.+++++|++.|. ..++|||+.++ ++.||...|||||+
T Consensus 423 ~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~--~~~~G~d~~~g--~~~dm~~~gI~dp~ 498 (543)
T 1we3_A 423 AVEELIKKLEGDEATGAKIVRRALEEPARQIAENAGYEGSVIVQQILAETK--NPRYGFNAATG--EFVDMVEAGIVDPA 498 (543)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHCCS--CTTEEEETTTT--EEEETTTTTCEEEH
T ss_pred HHHHHhhccCchHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHhcC--CCCEEEeCCCC--eecccccCCcCccH
Confidence 67899999999999999999998773 45789999999 99999999999999
Q ss_pred cchhhHhhhhhhcchhhccccccee
Q psy16434 583 LTKMWALKYATSAANTILQQTKAKI 607 (745)
Q Consensus 583 lVkG~vL~~A~e~a~mil~IDn~kI 607 (745)
.|+..+++.|++.+.|++++|++..
T Consensus 499 ~vk~~al~~A~e~a~~iL~id~iI~ 523 (543)
T 1we3_A 499 KVTRSALQNAASIGALILTTEAVVA 523 (543)
T ss_dssp HHHHHHHHHHHHHHHHHHTEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999998665
No 25
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=2.9e-59 Score=534.80 Aligned_cols=351 Identities=19% Similarity=0.299 Sum_probs=318.0
Q ss_pred HHHHHHHHHHHHHHHhhccccccccccceeeecCCCCeEEecCHHHHHhhccccCh----hhHHHHHHHhhhhchhcCcc
Q psy16434 186 EEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHP----AAKLIILGSQMQEEEMGDGT 261 (745)
Q Consensus 186 ~~a~~~ni~~~~~la~~v~tsLGP~G~~KmIv~~~g~i~ITnDG~tIlk~l~~~hP----~akll~~~s~~qd~~~GDGt 261 (745)
++++.+|++||..|+++|+|||||+||||||++++|+++|||||+||+|+|+++|| +|||++++|++||+++|||
T Consensus 9 ~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~G~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e~GDG- 87 (547)
T 1kp8_A 9 NDAGVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDG- 87 (547)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHHHHSSC-
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHccccChhhhHHHHHHHHHHHhhccccCCC-
Confidence 68999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chhhhHhhhhhhhhHHHHHhhhchhhHHHhhhccccccccCCCCchhHHHHHHHHHHHHHhhhCCCCHHHHHHHHHHHHH
Q psy16434 262 NFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTPSEIVNGYKLALA 341 (745)
Q Consensus 262 ~~~~~~~~~~l~~~~~~~~~~~~~~~~l~v~~~~~q~~~~GDgTTsvVvLa~eLL~~a~~li~~gihP~~I~~g~~~a~~ 341 (745)
|||+++||++||+++.+++++|+||+.|++||++|++
T Consensus 88 -------------------------------------------TTtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~ 124 (547)
T 1kp8_A 88 -------------------------------------------TTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVT 124 (547)
T ss_dssp -------------------------------------------HHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred -------------------------------------------cchhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999
Q ss_pred HHHHhcccccccccccCcccccccceeeeccccccCCChhhHHHHHHHHHHhhcCCCCCCCCccceEEEEccCCCcccc-
Q psy16434 342 KTLEILPTLTCFEVKDVRNVENVTKGIKSAIMSKQYGNEDFLTDLITKACVSILPDGSSSFNVDNVRITKILGSGLFNS- 420 (745)
Q Consensus 342 ~~l~~L~~~s~~~~~~~~~~~~L~~va~tsl~sK~~~~~~~ls~LivdAv~~v~~~~~~~~dl~~I~I~ki~Ggs~~dS- 420 (745)
.+++.|++++++. .+++.|.++|++++++ +++|++|+++|+.+++++ + .|+|+ .|+++++|
T Consensus 125 ~a~~~L~~~s~~v----~~~e~l~~vA~iS~~~-----~~~i~~liadAv~~V~~d--g-----~I~Ve--~G~~~~ds~ 186 (547)
T 1kp8_A 125 VAVEELKALSVPC----SDSKAIAQVGTISANS-----DETVGKLIAEAMDKVGKE--G-----VITVE--DGTGLQDEL 186 (547)
T ss_dssp HHHHHHHHHCBCC----CSHHHHHHHHHHHTTS-----CHHHHHHHHHHHHHHCTT--S-----EEEEE--CCSSSSCEE
T ss_pred HHHHHHHHhCcCC----CCHHHHHHHHHHhccc-----hhHHHHHHHHHHHHhCcC--C-----cEEEE--eCCcccccc
Confidence 9999999998773 3678899999988763 689999999999999864 2 26776 89999999
Q ss_pred eeEeeEEEeecccC---------CceeeeCceEEEeccCCCccccccC--------------------------------
Q psy16434 421 EIVQGMVFKRSVEG---------DITKQTKAKIAVYTCPVDIATTETK-------------------------------- 459 (745)
Q Consensus 421 ~lv~G~~l~~~~~~---------~~~~i~nakIlil~~~Le~~k~e~k-------------------------------- 459 (745)
++++||+|+++|.+ ++++++||+||+++++++..+.-..
T Consensus 187 ~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~d~~Is~~~~l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~i 266 (547)
T 1kp8_A 187 DVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTM 266 (547)
T ss_dssp EEESCEEESCCBSSTTCCSBTTTTBEEEESCEEECEESEECCGGGTHHHHHHHHGGGCCEEEEESEECHHHHHHHHHHGG
T ss_pred EEEecEEEecCccccccccCcccCceEecCceEEEEcCcCCCHHHHHHHHHHHHhcCCCEEEECCCcCHHHHHHHHhccc
Confidence 99999999999876 3667999999999998775432100
Q ss_pred ------------------------------------------CCCCcccccccccEEEEEECCeeEEEEEeccc------
Q psy16434 460 ------------------------------------------TPPAASELGYADSVAVDELGDTAVVVFKLEAA------ 491 (745)
Q Consensus 460 ------------------------------------------~~p~a~~LG~a~~vq~~eiGdtsvti~~g~~l------ 491 (745)
+++++++||+|+++++ +++++++|.|+..
T Consensus 267 rg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~a~~v~~---~~~~~~~i~g~~~~~~i~~ 343 (547)
T 1kp8_A 267 RGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVI---NKDTTTIIDGVGEEAAIQG 343 (547)
T ss_dssp GTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEEEEEEEE---CSSCEEEEEECCCHHHHHH
T ss_pred ccceeEEEEeccccccccHHHHHHHHHHhCCeEecccccCCcccCCHHHCCceeEEEE---ccceEEEEcCCCCHHHHHH
Confidence 5667789999999965 5699999999863
Q ss_pred ----------------------------ccceeEEEEcCCchhhHHHHHHHHHHHHHHHHHHHH----------------
Q psy16434 492 ----------------------------ESRIATLVIRGATENYMDDIERAVDDGVNTFKGITK---------------- 527 (745)
Q Consensus 492 ----------------------------~~~a~TIIlrG~t~~IldE~eral~DAL~vlk~~~~---------------- 527 (745)
+++++||++||+|+.+++|.+|+++||+++++++++
T Consensus 344 r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~vrG~te~~l~E~kr~i~DAl~~~r~av~~giVpGGGa~e~~~s~ 423 (547)
T 1kp8_A 344 RVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVAS 423 (547)
T ss_dssp HHHHHHHHHHSCCSHHHHHHHHHHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHHH
T ss_pred HHHHHHHHhhcccchhhHHHHHHHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHHHHHHHHhccCCEEeCCcHHHHHHHH
Confidence 137899999999999999999999999999999887
Q ss_pred ------------------------HHHHHHHhhccchhhHHHHHHHHHhhcCCccceeeecCCCcceeeccccccccccc
Q psy16434 528 ------------------------VFVKTLAENTGVKSNEVISKLYSAHNEGKKTYGFDINGENSSVIDAAEAGILDLYL 583 (745)
Q Consensus 528 ------------------------~IPr~LaeNAGld~~~vlsKL~~~h~~g~~~~GIDl~~~~ikI~dm~g~gI~Ds~l 583 (745)
.+|++|++|||+|+.+++++|++. ..++|||+.++ .+.||...|||||+.
T Consensus 424 ~L~~~~~~~g~~q~~i~~~a~ALe~ip~~la~NaG~d~~~vv~~l~~~----~~~~G~d~~~g--~~~dm~~~gI~Dp~~ 497 (547)
T 1kp8_A 424 KLADLRGQNADQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGG----DGNYGYNAATE--EYGNMIDMGILDPTK 497 (547)
T ss_dssp HTTTCCCSSHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHS----CTTEEEETTTT--EEEETTTTTCEEEHH
T ss_pred HHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhc----CCCEeEeCCCC--ccccchhcCceechH
Confidence 578999999999999999999864 25789999999 999999999999999
Q ss_pred chhhHhhhhhhcchhhccccccee
Q psy16434 584 TKMWALKYATSAANTILQQTKAKI 607 (745)
Q Consensus 584 VkG~vL~~A~e~a~mil~IDn~kI 607 (745)
|+..+|+.|++.+.|++++|++..
T Consensus 498 vk~~al~~A~~~A~~iL~id~iI~ 521 (547)
T 1kp8_A 498 VTRSALQYAASVAGLMITTECMVT 521 (547)
T ss_dssp HHHHHHHHHHHHHHHHHTEEEEEE
T ss_pred hHHHHHHHHHHHHHHHHhHhheee
Confidence 999999999999999999998665
No 26
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=8.5e-60 Score=538.26 Aligned_cols=354 Identities=21% Similarity=0.229 Sum_probs=253.7
Q ss_pred cChHHHHHHHHHHHHHHHhhccccccccccceeeecCCCCeEEecCHHHHHhhccccChh----hHHHHHHHhhhhchhc
Q psy16434 183 SGLEEAVYRNISACKDFADTVRTAYGPNGMNKIVINHIDKLFVTNDAATIIRELEIEHPA----AKLIILGSQMQEEEMG 258 (745)
Q Consensus 183 ~g~~~a~~~ni~~~~~la~~v~tsLGP~G~~KmIv~~~g~i~ITnDG~tIlk~l~~~hP~----akll~~~s~~qd~~~G 258 (745)
+| +++|.+|+.||.+|+++|+|||||+||||||+++.|+++|||||+||||+|+++||+ |||++++|++||+++|
T Consensus 7 ~~-~~ar~~~~~~~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hp~~n~gAkll~e~a~~qd~e~G 85 (546)
T 3rtk_A 7 YD-EEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDDVAG 85 (546)
T ss_dssp -------------------------------------------------------CCCHHHHHHHHHHHHHHTSCC----
T ss_pred cc-HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECcHHHHHHHccCCChhhhHHHHHHHHHHHhhhhhhC
Confidence 44 689999999999999999999999999999999999999999999999999999998 8999999999999999
Q ss_pred CccchhhhHhhhhhhhhHHHHHhhhchhhHHHhhhccccccccCCCCchhHHHHHHHHHHHHHhhhCCCCHHHHHHHHHH
Q psy16434 259 DGTNFVIIFAGALLVNADNLLRMIEHPAAKLIILGSQMQEEEMGDGTNFVIIFAGALLVNADNLLRMGLTPSEIVNGYKL 338 (745)
Q Consensus 259 DGt~~~~~~~~~~l~~~~~~~~~~~~~~~~l~v~~~~~q~~~~GDgTTsvVvLa~eLL~~a~~li~~gihP~~I~~g~~~ 338 (745)
|| |||+++||++||+++.+++++|+||+.|++||++
T Consensus 86 DG--------------------------------------------TTtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~ 121 (546)
T 3rtk_A 86 DG--------------------------------------------TTTATVLAQALVREGLRNVAAGANPLGLKRGIEK 121 (546)
T ss_dssp -----------------------------------------------CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred CC--------------------------------------------cchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 99 9999999999999999999999999999999999
Q ss_pred HHHHHHHhcccccccccccCcccccccceeeeccccccCCChhhHHHHHHHHHHhhcCCCCCCCCccceEEEEccCCCcc
Q psy16434 339 ALAKTLEILPTLTCFEVKDVRNVENVTKGIKSAIMSKQYGNEDFLTDLITKACVSILPDGSSSFNVDNVRITKILGSGLF 418 (745)
Q Consensus 339 a~~~~l~~L~~~s~~~~~~~~~~~~L~~va~tsl~sK~~~~~~~ls~LivdAv~~v~~~~~~~~dl~~I~I~ki~Ggs~~ 418 (745)
|++.+++.|++++++. .+++.|.++|++|++ +++|++|+++|+.+++++ + .|+|++.. +...
T Consensus 122 A~~~a~e~L~~~s~~v----~~~e~L~~vA~iS~~------~~~i~~liadAv~~V~~d--g-----vI~Ve~~~-~~~~ 183 (546)
T 3rtk_A 122 AVEKVTETLLKGAKEV----ETKEQIAATAAISAG------DQSIGDLIAEAMDKVGNE--G-----VITVEESN-TFGL 183 (546)
T ss_dssp HHHHHHHHHHHTCBCC----CSHHHHHHHHHHHHT------CHHHHHHHHHHHHHSCTT--S-----EEEEECCS-SSSC
T ss_pred HHHHHHHHHHHhcccC----CChHHHHhHeEEeCC------chHHHHHHHHHHHHhccC--C-----ceEEEecC-Cccc
Confidence 9999999999998763 367889999998886 468999999999999864 3 27777643 4557
Q ss_pred cceeEeeEEEeecccC---------CceeeeCceEEEeccCCCcccccc-----------C-------------------
Q psy16434 419 NSEIVQGMVFKRSVEG---------DITKQTKAKIAVYTCPVDIATTET-----------K------------------- 459 (745)
Q Consensus 419 dS~lv~G~~l~~~~~~---------~~~~i~nakIlil~~~Le~~k~e~-----------k------------------- 459 (745)
||++++||+|++++.+ +|++++|||||+++++++..+.-. +
T Consensus 184 ds~lveGm~fdkg~~sp~~vt~~e~m~~~len~kIll~d~kIs~~~~l~~~le~I~~~g~~lvIi~~~I~~~Al~~L~~n 263 (546)
T 3rtk_A 184 QLELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLVSSKVSTVKDLLPLLEKVIGAGKPLLIIAEDVEGEALSTLVVN 263 (546)
T ss_dssp EEEEECEEEESCCBSSGGGCSBTTTTBEEEESCEEEEBSSEECCSTTTHHHHHHHHTTTCCEEEEESEECHHHHHHHHHH
T ss_pred ceEEeeeEEEcCCccCcccccCcccCeeEecccEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHh
Confidence 8999999999999865 478999999999999765433210 0
Q ss_pred --------------------------------------------CCCCcccccccccEEEEEECCeeEEEEEeccc----
Q psy16434 460 --------------------------------------------TPPAASELGYADSVAVDELGDTAVVVFKLEAA---- 491 (745)
Q Consensus 460 --------------------------------------------~~p~a~~LG~a~~vq~~eiGdtsvti~~g~~l---- 491 (745)
+++++++||+|++++ +|++++++|.|+..
T Consensus 264 ~lrg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~---i~~d~~~~i~g~~~~~~i 340 (546)
T 3rtk_A 264 KIRGTFKSVAVKAPGFGDRRKAMLQDMAILTGGQVISEEVGLTLENADLSLLGKARKVV---VTKDETTIVEGAGDTDAI 340 (546)
T ss_dssp HHHSSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCSSSSCCSTTCCTTTSEEEEEEE---ECSSCEEEEEECSCHHHH
T ss_pred CCCCceEEEEeccccccccchhhHHHHHHHhCCEEeeccccCccccCCHhhCCeeEEEE---EcCCeEEEEcCCCCHHHH
Confidence 467788999999996 68899999998753
Q ss_pred ------------------------------ccceeEEEEcCCchhhHHHHHHHHHHHHHHHHHHHH--------------
Q psy16434 492 ------------------------------ESRIATLVIRGATENYMDDIERAVDDGVNTFKGITK-------------- 527 (745)
Q Consensus 492 ------------------------------~~~a~TIIlrG~t~~IldE~eral~DAL~vlk~~~~-------------- 527 (745)
+++++||++||+|+.+++|.+|+++||+++++++++
T Consensus 341 ~~r~~~i~~~~~~~~s~~~~ekl~erlakl~g~~atI~vrG~te~~l~E~er~l~DAl~a~r~av~~giVpGGGa~e~~~ 420 (546)
T 3rtk_A 341 AGRVAQIRQEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVTLLQA 420 (546)
T ss_dssp HHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHCEEEEECCCCSSTHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHTT
T ss_pred HHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHhCCcccCCcHHHHHH
Confidence 235799999999999999999999999999999987
Q ss_pred -------------------------HHHHHHHhhccchhhHHHHHHHHHhhcCCccceeeecCCCcceeecccccccccc
Q psy16434 528 -------------------------VFVKTLAENTGVKSNEVISKLYSAHNEGKKTYGFDINGENSSVIDAAEAGILDLY 582 (745)
Q Consensus 528 -------------------------~IPr~LaeNAGld~~~vlsKL~~~h~~g~~~~GIDl~~~~ikI~dm~g~gI~Ds~ 582 (745)
.+|++|++|||+|+.+++++|++. . ..+|||+.++ ++.||...|||||+
T Consensus 421 s~~L~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~-~---~~~G~d~~~g--~~~Dm~~~gI~dp~ 494 (546)
T 3rtk_A 421 APTLDELKLEGDEATGANIVKVALEAPLKQIAFNSGLEPGVVAEKVRNL-P---AGHGLNAQTG--VYEDLLAAGVADPV 494 (546)
T ss_dssp GGGSTTSCCCTTHHHHHHHHHHHTTHHHHHHHTTTTCCHHHHHHHHHHS-C---TTEECCSSSC--CCEETTTTTCEEEH
T ss_pred HHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhh-c---CCEeEcCCCC--cEeeHHHcCCEecH
Confidence 578999999999999999999874 2 2389999999 99999999999999
Q ss_pred cchhhHhhhhhhcchhhcccccceee
Q psy16434 583 LTKMWALKYATSAANTILQQTKAKIA 608 (745)
Q Consensus 583 lVkG~vL~~A~e~a~mil~IDn~kIl 608 (745)
.|+.++|+.|++.+.|++++|++...
T Consensus 495 ~vk~~al~~A~e~A~~iL~id~iI~~ 520 (546)
T 3rtk_A 495 KVTRSALQNAASIAGLFLTTEAVVAD 520 (546)
T ss_dssp HHHHHHHHHHHHHHHHHHHCC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999988653
No 27
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.98 E-value=3.6e-34 Score=326.47 Aligned_cols=268 Identities=18% Similarity=0.205 Sum_probs=226.2
Q ss_pred CCCCcccccccccEEEEEECC--eeEEEEEecccccceeEEEEcCC-chhhHHHHHHHHHHHHHHHHHHHHHHH----HH
Q psy16434 460 TPPAASELGYADSVAVDELGD--TAVVVFKLEAAESRIATLVIRGA-TENYMDDIERAVDDGVNTFKGITKVFV----KT 532 (745)
Q Consensus 460 ~~p~a~~LG~a~~vq~~eiGd--tsvti~~g~~l~~~a~TIIlrG~-t~~IldE~eral~DAL~vlk~~~~~IP----r~ 532 (745)
+||.++++.++++.|++++|| |++++|+|+.+ ..+..++-+|. |..|.++++.+++.|++.++.....+. ..
T Consensus 61 ~hP~Akll~e~a~~qd~e~GDGTTtvvvLAgeLL-~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~ 139 (515)
T 3iyg_G 61 QHPAAKSMIEISRTQDEEVGDGTTSVIILAGEML-SVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDTSNRDT 139 (515)
T ss_pred CCHHHHHHHHHHHHhhhhhCCChhhHHHHHHHHH-HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCHHH
Confidence 789999999999999999999 88889999988 77888888897 889999999999999999987653111 12
Q ss_pred HHhhccchhhHHHHHHHHHhhcCC----------------ccceeeecCCCcceeecccccccccccchhhHhhhhhhcc
Q psy16434 533 LAENTGVKSNEVISKLYSAHNEGK----------------KTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAA 596 (745)
Q Consensus 533 LaeNAGld~~~vlsKL~~~h~~g~----------------~~~GIDl~~~~ikI~dm~g~gI~Ds~lVkG~vL~~A~e~a 596 (745)
|..-| .+.+.+|+...+.+.. ....+|+.+ .++|++++|+++.|+.+|+|++|++...+.
T Consensus 140 l~~va---~tsl~sK~i~~~~~~~~~i~vdav~~V~~~~~~~~~~dl~~-~I~I~ki~Ggs~~ds~lv~G~v~dk~~~~~ 215 (515)
T 3iyg_G 140 MLNII---NSSITTKVISRWSSLACNIALDAVKTVQFEENGRKEIDIKK-YARVEKIPGGIIEDSCVLRGVMINKDVTHP 215 (515)
T ss_pred HHHHH---HHHhcCCchhhHHHHHHHHHHHHHHhcccccCCCcccchhh-eeEEEEecCCCcccceEEeeEEEeCCCCCC
Confidence 22111 1112222211111100 011133322 158999999999999999999999999999
Q ss_pred hhhcccccceeeeeccCcccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCcccHHHHHHHHHc
Q psy16434 597 NTILQQTKAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAKFGDMALHYLNKY 676 (745)
Q Consensus 597 ~mil~IDn~kIlll~~~Le~~k~e~~~~v~i~s~~el~~~~~~E~~~i~~~V~~I~~~gvnVVl~~~~I~d~al~~L~k~ 676 (745)
.|+++++||+|++++|||||+++++++++.+++++++++++++|+++++++|++|++.|+||||++++|+|+|+|||.++
T Consensus 216 ~m~~~ien~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi~~~~I~~~al~~L~~~ 295 (515)
T 3iyg_G 216 RMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRA 295 (515)
T ss_pred CCcceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEeCCHHHHHHHHHHhCCeecccCCCCCCCCCcc-cCCceEe--cccccCccccc
Q psy16434 677 GLMGVRLNSKFDLRRLCKAVNATALPRLVSTYIKMPSF-CPAPPVQ--GRERDRPAQTC 732 (745)
Q Consensus 677 gIl~ir~v~k~dLeRIaraTGA~ivssld~l~~~~LG~-c~~~~~~--~~e~~~~~~~~ 732 (745)
||++++++++++|+|||++|||+++++++++.+++||+ |+.|++. |+++|++.+.|
T Consensus 296 ~I~av~~~~k~~leria~~tGa~ii~~l~~l~~~~LG~~a~~v~~~~~g~~~~~~i~g~ 354 (515)
T 3iyg_G 296 NITAIRRVRKTDNNRIARACGARIVSRPEELREEDVGTGAGLLEIKKIGDEYFTFITEC 354 (515)
T ss_pred CceeeccCCHHHHHHHHHHhCCeeeccccccChhhcCCcccEEEEEEECCceEEEEeCC
Confidence 99999999999999999999999999999999999999 9999985 77888765544
No 28
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.98 E-value=2.8e-33 Score=272.85 Aligned_cols=154 Identities=25% Similarity=0.321 Sum_probs=147.0
Q ss_pred chhhHhhhhhhcchhhcccccceeeeeccCcccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCC
Q psy16434 584 TKMWALKYATSAANTILQQTKAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGA 663 (745)
Q Consensus 584 VkG~vL~~A~e~a~mil~IDn~kIlll~~~Le~~k~e~~~~v~i~s~~el~~~~~~E~~~i~~~V~~I~~~gvnVVl~~~ 663 (745)
|+|+++++.+.+..|++++.||+|++++||||++++++++++.++++++++++.++|+++++++|++|+++|+||||++|
T Consensus 1 i~Gvv~~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nVVl~~k 80 (159)
T 1ass_A 1 MSGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQK 80 (159)
T ss_dssp CCCEEESCCCSCTTSCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTCSEEEESS
T ss_pred CceEEEecccCCCCCCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCCeEEEECC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccHHHHHHHHHcCCeEEEeCCHHHHHHHHHHhCCeecccCCCCCCCCCcccCCceEe--cccccCcccccccccc
Q psy16434 664 KFGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNATALPRLVSTYIKMPSFCPAPPVQ--GRERDRPAQTCKYLHQ 737 (745)
Q Consensus 664 ~I~d~al~~L~k~gIl~ir~v~k~dLeRIaraTGA~ivssld~l~~~~LG~c~~~~~~--~~e~~~~~~~~~~~~~ 737 (745)
+|+|+|+|||.++||++++|++++||+|||++|||+++++++++.++.||+|+.|+++ |+++|++-+.|+--|.
T Consensus 81 ~I~d~a~~~l~k~gI~~v~~v~~~dleria~atGa~iv~~~~~l~~~~LG~~~~v~e~~ig~~~~~~~~g~~~~~~ 156 (159)
T 1ass_A 81 GIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKNHHH 156 (159)
T ss_dssp CBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHTCCCBSSTTSCCTTSCEEEEEEEEEEETTEEEEEEESCC----
T ss_pred ccCHHHHHHHHHCCCEEEccCCHHHHHHHHHHhCCeeeCccccCCcccCccceEEEEEEECCeEEEEEECCCCccc
Confidence 9999999999999999999999999999999999999999999999999999999996 9999999999987664
No 29
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=99.98 E-value=4.9e-33 Score=275.94 Aligned_cols=155 Identities=15% Similarity=0.201 Sum_probs=134.2
Q ss_pred ccccccchhhHhhhhhhcchhhcccccceeeeeccCcccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Q psy16434 578 ILDLYLTKMWALKYATSAANTILQQTKAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGAN 657 (745)
Q Consensus 578 I~Ds~lVkG~vL~~A~e~a~mil~IDn~kIlll~~~Le~~k~e~~~~v~i~s~~el~~~~~~E~~~i~~~V~~I~~~gvn 657 (745)
+.||.+++|+++++.+.+..|++++.|++|++++||||++++++++++.++++++++++.++|+++++++|++|+++|+|
T Consensus 1 ~~dS~lv~Gvvl~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~n 80 (178)
T 1gml_A 1 MEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQLKPD 80 (178)
T ss_dssp --CCSEEEEEEESCCCSSTTSCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHHHHTTCCS
T ss_pred CCCcEEEEEEEEeccccCCCCCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHHHHhhcCCc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCcccHHHHHHHHHcCCeEEEeCCHHHHHHHHHHhCCeecccCCCCCCCCCcc-cCCceEe--cccccCccccc
Q psy16434 658 VVVAGAKFGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNATALPRLVSTYIKMPSF-CPAPPVQ--GRERDRPAQTC 732 (745)
Q Consensus 658 VVl~~~~I~d~al~~L~k~gIl~ir~v~k~dLeRIaraTGA~ivssld~l~~~~LG~-c~~~~~~--~~e~~~~~~~~ 732 (745)
|||++|+|+|+|+|||.++||++++|++++||+|||++|||+++++++++.+++||+ |+.|+++ |+++|.+-+.|
T Consensus 81 VVl~~k~I~d~a~~~l~k~gI~~vr~v~~~dleria~atGa~iv~~~~~l~~~~LG~~~~~v~~~~ig~~~~~~~~gc 158 (178)
T 1gml_A 81 VVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDC 158 (178)
T ss_dssp EEEESSCBCHHHHHHHHHTTCEEECCCCHHHHHHHHHHHCCCEESCGGGCCGGGSBCCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEECCcccHHHHHHHHHCCCEEEecCCHHHHHHHHHHhCCeEeCChhhCChhhhCCcccEEEEEEECCeEEEEEECC
Confidence 999999999999999999999999999999999999999999999999999999999 9999985 88998655544
No 30
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=99.97 E-value=5.3e-33 Score=316.71 Aligned_cols=268 Identities=17% Similarity=0.179 Sum_probs=225.0
Q ss_pred CCCCcccccccccEEEEEECC--eeEEEEEecccccceeEEEEcCC-chhhHHHHHHHHHHHHHHHHHHHHHHH------
Q psy16434 460 TPPAASELGYADSVAVDELGD--TAVVVFKLEAAESRIATLVIRGA-TENYMDDIERAVDDGVNTFKGITKVFV------ 530 (745)
Q Consensus 460 ~~p~a~~LG~a~~vq~~eiGd--tsvti~~g~~l~~~a~TIIlrG~-t~~IldE~eral~DAL~vlk~~~~~IP------ 530 (745)
+||.++++.++++.|++++|| |++++|+|+.+ ..+..++-+|. |..+.++++.+++.|++.++.....+.
T Consensus 64 ~hp~Akll~e~a~~qd~e~GDGTTtvvVLA~~LL-~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~ 142 (513)
T 3iyg_B 64 DNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELL-REAESLIAKKIHPQTIIAGWREATKAARQALLNSAVDHGSDEVKF 142 (513)
T ss_pred cCHHHHHHHHHHHHhhhhhCCChhhhHHHHHHHH-HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCcccccccC
Confidence 789999999999999999999 88999999988 77888888897 889999999999999999987653221
Q ss_pred -HHHHhhccchhhHHHHHHHHHhhcCC--------ccceeeecCCCcceeecccccccccccchhhHhhhhhhcchhhcc
Q psy16434 531 -KTLAENTGVKSNEVISKLYSAHNEGK--------KTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAANTILQ 601 (745)
Q Consensus 531 -r~LaeNAGld~~~vlsKL~~~h~~g~--------~~~GIDl~~~~ikI~dm~g~gI~Ds~lVkG~vL~~A~e~a~mil~ 601 (745)
..|.+-| .+.+.+|+.+.+.+.. ..+|-+++.+.+++.++.++++.|+.+++|++|++...+. |+++
T Consensus 143 ~~~l~~va---~tslssK~~~~~~~~i~~livdAv~~V~~~~d~~~I~V~ki~gg~~~ds~lv~G~v~dk~~~~~-m~~~ 218 (513)
T 3iyg_B 143 RQDLMNIA---GTTLSSKLLTHHKDHFTKLAVEAVLRLKGSGNLEAIHVIKKLGGSLADSYLDEGFLLDKKIGVN-QPKR 218 (513)
T ss_pred HHHHHHHH---HhhhcccccccchHHHHHHHHHHHHHhcccCCcCeEEEEEeCCCCccceeEEeeEEEeccccCC-Ccee
Confidence 1222211 1122222211111100 0112122224458999999999999999999999988776 9999
Q ss_pred cccceeeeeccCccccccc-ccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCcccHHHHHHHHHcCCeE
Q psy16434 602 QTKAKIAVYTCPVDIATTE-TKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAKFGDMALHYLNKYGLMG 680 (745)
Q Consensus 602 IDn~kIlll~~~Le~~k~e-~~~~v~i~s~~el~~~~~~E~~~i~~~V~~I~~~gvnVVl~~~~I~d~al~~L~k~gIl~ 680 (745)
++||+|+++++||||++++ +++++.++++++++++.++|++++++++++|+++|+||||++++|+|+|+|||.++||++
T Consensus 219 ~en~kIll~~~~Le~~k~e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~~~I~a 298 (513)
T 3iyg_B 219 IENAKILIANTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAGVMA 298 (513)
T ss_pred ecCceEEEEcCCcccccccccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHcCceE
Confidence 9999999999999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCHHHHHHHHHHhCCeecccCCCCCCCCCcccCCceEe--cccccCccccc
Q psy16434 681 VRLNSKFDLRRLCKAVNATALPRLVSTYIKMPSFCPAPPVQ--GRERDRPAQTC 732 (745)
Q Consensus 681 ir~v~k~dLeRIaraTGA~ivssld~l~~~~LG~c~~~~~~--~~e~~~~~~~~ 732 (745)
++++++++|+|||++|||+++++++++.+++||+|++|++. |+|+|.+-..|
T Consensus 299 v~~~~~~~le~ia~~tGa~ii~~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~ 352 (513)
T 3iyg_B 299 IEHADFVGVERLALVTGGEIASTFDHPELVKLGSCKLIEEVMIGEDKLIHFSGV 352 (513)
T ss_pred EecCCHHHHHHHHHHhCCEEecccccCCHhHCCcccEEEEEEECCeEEEEEecC
Confidence 99999999999999999999999999999999999999984 88988765544
No 31
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.97 E-value=6.8e-33 Score=315.83 Aligned_cols=285 Identities=18% Similarity=0.179 Sum_probs=231.3
Q ss_pred EEEeccCCCccccccCCCCCcccccccccEEEEEECC--eeEEEEEecccccceeEEEEcCC-chhhHHHHHHHHHHHHH
Q psy16434 444 IAVYTCPVDIATTETKTPPAASELGYADSVAVDELGD--TAVVVFKLEAAESRIATLVIRGA-TENYMDDIERAVDDGVN 520 (745)
Q Consensus 444 Ilil~~~Le~~k~e~k~~p~a~~LG~a~~vq~~eiGd--tsvti~~g~~l~~~a~TIIlrG~-t~~IldE~eral~DAL~ 520 (745)
+.++|..-...+.-.-+||.++++.++++.|++++|| |++++|+|+.+ ..+..++-+|. |..+.++++.+++.|++
T Consensus 47 ~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~~~GDGTTtvvVLA~~Ll-~~a~~li~~GihP~~I~~G~~~A~~~a~~ 125 (515)
T 3iyg_H 47 ATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFL-KQVKPYVEEGLHPQIIIRAFRTATQLAVN 125 (515)
T ss_pred eEEECCHHHHHHHccCCCHHHHHHHHHHHHhhceeCcchhhHHHHHHHHH-HHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Confidence 3444433233332223789999999999999999999 88999999988 78888888897 88999999999999999
Q ss_pred HHHHHHHHH--------HHHHHhhccchhhHHHHHHHHHhhcCCc--------cceeeecCCCcceeecccccccccccc
Q psy16434 521 TFKGITKVF--------VKTLAENTGVKSNEVISKLYSAHNEGKK--------TYGFDINGENSSVIDAAEAGILDLYLT 584 (745)
Q Consensus 521 vlk~~~~~I--------Pr~LaeNAGld~~~vlsKL~~~h~~g~~--------~~GIDl~~~~ikI~dm~g~gI~Ds~lV 584 (745)
.++.....+ ...|.+-| .+.+.+|+.+.+.+... .+|-+++.+.++|.++.|+.+.|+.++
T Consensus 126 ~L~~~a~~v~~~~~~~~~~~L~~va---~tsl~sK~~s~~~~~i~~livdAv~~V~~~~d~~~I~V~k~~Gg~~~ds~lv 202 (515)
T 3iyg_H 126 KIKEIAVTVKKEDKVEQRKLLEKCA---MTALSSKLISQQKAFFAKMVVDAVMMLDDLLQLKMIGIKKVQGGALEESQLV 202 (515)
T ss_pred HHHHhhcccccCChHHHHHHHHHHH---HHHhcCCcccccHHHHHHHHHHHHHHhcccCCcceEEEEecCCCCccceEEE
Confidence 998765322 11111111 12222222211111100 112122234458999999999999999
Q ss_pred hhhHhhhhhhcch---hhcccccceeeeeccCcccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEe
Q psy16434 585 KMWALKYATSAAN---TILQQTKAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVA 661 (745)
Q Consensus 585 kG~vL~~A~e~a~---mil~IDn~kIlll~~~Le~~k~e~~~~v~i~s~~el~~~~~~E~~~i~~~V~~I~~~gvnVVl~ 661 (745)
+|++|++...+.. |+++++||+|+++++|||++++++++++.+++++++++++++|++++++++++|++.|++|||+
T Consensus 203 ~G~~~dk~~~~p~~~~~p~~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~ 282 (515)
T 3iyg_H 203 AGVAFKKTFSYAGFEMQPKKYHNPMIALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLS 282 (515)
T ss_pred eeeEEecCccCcccccCCccccccEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 9999999988775 4789999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEeCCHHHHHHHHHHhCCeecccCCCCCCCCCcccCCceEe--cccccCccccc
Q psy16434 662 GAKFGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNATALPRLVSTYIKMPSFCPAPPVQ--GRERDRPAQTC 732 (745)
Q Consensus 662 ~~~I~d~al~~L~k~gIl~ir~v~k~dLeRIaraTGA~ivssld~l~~~~LG~c~~~~~~--~~e~~~~~~~~ 732 (745)
+++|+|+|+|||+++||++++++++++|+|||++|||+++++++++.+++||+|+.|++. |+++|++.+.|
T Consensus 283 ~~~I~dla~~~l~~~gI~~v~~~~k~~leria~~tGa~ii~~l~~~~~~~LG~a~~v~~~~ig~~~~~~i~g~ 355 (515)
T 3iyg_H 283 KLPIGDVATQYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALSSDVLGRCQVFEETQIGGERYNFFTGC 355 (515)
T ss_pred CCcccHHHHHHHHHcCCcccccccHHHHHHHHHHhCCEEeeccccCCHHHCCcccEEEEEEEcCeEEEEEecC
Confidence 999999999999999999999999999999999999999999999999999999999996 78888766554
No 32
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.97 E-value=5.1e-33 Score=317.89 Aligned_cols=268 Identities=22% Similarity=0.257 Sum_probs=224.7
Q ss_pred CCCCcccccccccEEEEEECC--eeEEEEEecccccceeEEEEcCC-chhhHHHHHHHHHHHHHHHHH-HHHHH----HH
Q psy16434 460 TPPAASELGYADSVAVDELGD--TAVVVFKLEAAESRIATLVIRGA-TENYMDDIERAVDDGVNTFKG-ITKVF----VK 531 (745)
Q Consensus 460 ~~p~a~~LG~a~~vq~~eiGd--tsvti~~g~~l~~~a~TIIlrG~-t~~IldE~eral~DAL~vlk~-~~~~I----Pr 531 (745)
+||.++++.++++.|++++|| |++++|+|+.+ ..+..++-+|. |..|.++++.+++.|++.++. ....+ ..
T Consensus 62 ~hP~akll~~~a~~qd~e~GDGTTtvvvLA~eLL-~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e 140 (529)
T 3iyg_A 62 EHPAAKVLCELADLQDKEVGDGTTSVVIIAAELL-KNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTDELGRD 140 (529)
T ss_pred CChHHHHHHHHHHHhhhhhCCChhhHHHHHHHHH-HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHH
Confidence 789999999999999999999 88899999988 77888888897 889999999999999999987 43211 11
Q ss_pred HHHhhcc--c------hhhHHHHHHHHHh--------hcCCccceeeecCCCcceeecccccccccccchhhHhhhhhhc
Q psy16434 532 TLAENTG--V------KSNEVISKLYSAH--------NEGKKTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSA 595 (745)
Q Consensus 532 ~LaeNAG--l------d~~~vlsKL~~~h--------~~g~~~~GIDl~~~~ikI~dm~g~gI~Ds~lVkG~vL~~A~e~ 595 (745)
.|..-|. + ...+.+.++.... .++. ..+|+.+ +++.++.|+++.|+.+++|++|++...+
T Consensus 141 ~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~g~--~~~dv~~--I~I~k~~G~~~~ds~lv~G~v~dk~~~~ 216 (529)
T 3iyg_A 141 CLINAAKTSMSSKVIGINGDFFANLVVDAVLAIKYTDIRGQ--PRYPVNS--INVLKAHGRSQMESMLINGYALNCVVGS 216 (529)
T ss_pred HHHHHHHHHhccCcccccHHHHHHHHHHHHHHHhhhccCCC--cccccce--EEEEEecCCCccceEEEeeeEEecCccc
Confidence 2221110 0 0112222222110 0111 1234433 4889999999999999999999999999
Q ss_pred chhhcccccceeeeeccCcccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCcccHHHHHHHHH
Q psy16434 596 ANTILQQTKAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAKFGDMALHYLNK 675 (745)
Q Consensus 596 a~mil~IDn~kIlll~~~Le~~k~e~~~~v~i~s~~el~~~~~~E~~~i~~~V~~I~~~gvnVVl~~~~I~d~al~~L~k 675 (745)
..|+++++|++|++++||||++++++++++.++++++++.+.++|++++++++++|+++|+||||++++|+|+|+|||.+
T Consensus 217 ~~m~~~ien~kIlll~~~le~~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~ 296 (529)
T 3iyg_A 217 QGMPKRIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVE 296 (529)
T ss_pred ccCCcccCCceEEEecCCcccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEeCCHHHHHHHHHHhCCeecccCCCCC------CCCCcccCCceEe--cccccCccccc
Q psy16434 676 YGLMGVRLNSKFDLRRLCKAVNATALPRLVSTY------IKMPSFCPAPPVQ--GRERDRPAQTC 732 (745)
Q Consensus 676 ~gIl~ir~v~k~dLeRIaraTGA~ivssld~l~------~~~LG~c~~~~~~--~~e~~~~~~~~ 732 (745)
+||++++++++++|+|||++|||+++++++++. +++||+|+.|+++ |+++|.+.+.|
T Consensus 297 ~gI~av~~v~k~~leria~~tGa~iv~~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~ 361 (529)
T 3iyg_A 297 AGAMAVRRVLKRDLKRIAKASGATVLSTLANLEGEETFEASMLGQAEEVVQERICDDELILIKNT 361 (529)
T ss_pred cCCceeccCCHHHHHHHHHHhCCeeecchhcccchhccChhhCccceEEEEEEeCCceEEEEEcC
Confidence 999999999999999999999999999998765 5789999999975 88888766554
No 33
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.97 E-value=7e-33 Score=315.90 Aligned_cols=267 Identities=18% Similarity=0.197 Sum_probs=226.3
Q ss_pred CCCCcccccccccEEEEEECC--eeEEEEEecccccceeEEEEcCC-chhhHHHHHHHHHHHHHHHHHHHHHHH---HHH
Q psy16434 460 TPPAASELGYADSVAVDELGD--TAVVVFKLEAAESRIATLVIRGA-TENYMDDIERAVDDGVNTFKGITKVFV---KTL 533 (745)
Q Consensus 460 ~~p~a~~LG~a~~vq~~eiGd--tsvti~~g~~l~~~a~TIIlrG~-t~~IldE~eral~DAL~vlk~~~~~IP---r~L 533 (745)
+||.++++.++++.|++++|| |++++|+|+.+ ..+..++-+|. |..|.++++++++.|++.++.....++ ..|
T Consensus 62 ~hp~akll~~~a~~qd~e~GDGTTtvvvLa~~Ll-~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~L 140 (517)
T 3iyg_Z 62 QHPTASLIAKVATAQDDITGDGTTSNVLIIGELL-KQADLYISEGLHPRIITEGFEAAKEKALQFLEQVKVSKEMDRETL 140 (517)
T ss_pred cCHHHHHHHHHHHHHHHHhCCCceeHHHHHHHHH-HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhCcCCCCCHHHH
Confidence 789999999999999999999 88888999988 78888888998 889999999999999999987653211 122
Q ss_pred HhhccchhhHHHHHHHHHhhcCCcc-------------ceeeecCCCcceeecccccccccccchhhHhhhhhhcchhhc
Q psy16434 534 AENTGVKSNEVISKLYSAHNEGKKT-------------YGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAANTIL 600 (745)
Q Consensus 534 aeNAGld~~~vlsKL~~~h~~g~~~-------------~GIDl~~~~ikI~dm~g~gI~Ds~lVkG~vL~~A~e~a~mil 600 (745)
.+-| .+++.+|+...+++.+.. -.+|++. ++|.++.|+.+.|+.+++|++|++...+..|++
T Consensus 141 ~~va---~tsl~sKi~~~~~d~la~l~vdaV~~V~~~~~~~dl~~--I~I~k~~Gg~~~ds~lv~G~v~dk~~~~p~m~~ 215 (517)
T 3iyg_Z 141 IDVA---RTSLRTKVHAELADVLTEAVVDSILAIKKQDEPIDLFM--VEIMEMKHKSETDTSLIRGLVLDHGARHPDMKK 215 (517)
T ss_pred HHHH---HHHhccccchhHHHHHHHHHHHHhheeccCCCcCChhH--heeeeecCCCccccceEeeEEEeccCCCCCccc
Confidence 2211 122222222222111111 1234433 599999999999999999999999999999999
Q ss_pred ccccceeeeeccCcccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCc---------EEEeCCcccHHHHH
Q psy16434 601 QQTKAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGAN---------VVVAGAKFGDMALH 671 (745)
Q Consensus 601 ~IDn~kIlll~~~Le~~k~e~~~~v~i~s~~el~~~~~~E~~~i~~~V~~I~~~gvn---------VVl~~~~I~d~al~ 671 (745)
+++||+|+++++||||+++++++++.++++++++++.++|+++++++|++|+.+|++ |||++++|+|+|+|
T Consensus 216 ~ien~kIll~~~~le~~k~e~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al~ 295 (517)
T 3iyg_Z 216 RVEDAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLD 295 (517)
T ss_pred cccCCeEEEecccccccccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCceEEEecccCCHHHHH
Confidence 999999999999999999999999999999999999999999999999999999988 49999999999999
Q ss_pred HHHHcCCeEEEeCCHHHHHHHHHHhCCeecccCCCCCCCC-CcccCCceEe--cccccCcccccc
Q psy16434 672 YLNKYGLMGVRLNSKFDLRRLCKAVNATALPRLVSTYIKM-PSFCPAPPVQ--GRERDRPAQTCK 733 (745)
Q Consensus 672 ~L~k~gIl~ir~v~k~dLeRIaraTGA~ivssld~l~~~~-LG~c~~~~~~--~~e~~~~~~~~~ 733 (745)
||.++||++++++++++|+|||++|||+++++++++.+++ ||+|+ |++. |+++|++.+.|.
T Consensus 296 ~L~~~gI~~v~~v~~~~leria~~tGa~iv~~l~~l~~~~~LG~a~-v~e~~ig~~~~~~~~g~~ 359 (517)
T 3iyg_Z 296 ALAKEGIIALRRAKRRNMERLTLACGGIALNSLDDLNPDCLLGHAG-VYEYTLGEEKFTFIEKCN 359 (517)
T ss_pred HHHHCCCEEEEecCHHHHHHHHHHhCCEEecchhhCcccccCCcce-EEEEEEcCceEEEEeCCC
Confidence 9999999999999999999999999999999999999999 99999 9875 888887766553
No 34
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.97 E-value=3.1e-32 Score=310.57 Aligned_cols=270 Identities=22% Similarity=0.251 Sum_probs=225.8
Q ss_pred CCCCcccccccccEEEEEECC--eeEEEEEecccccceeEEEEcCC-chhhHHHHHHHHHHHHHHHHHHHHHH------H
Q psy16434 460 TPPAASELGYADSVAVDELGD--TAVVVFKLEAAESRIATLVIRGA-TENYMDDIERAVDDGVNTFKGITKVF------V 530 (745)
Q Consensus 460 ~~p~a~~LG~a~~vq~~eiGd--tsvti~~g~~l~~~a~TIIlrG~-t~~IldE~eral~DAL~vlk~~~~~I------P 530 (745)
+||.++++.++++.|++++|| |++++|+++.+ ..+..++-.|. |..+.++++.+++.|++.++.....+ .
T Consensus 62 ~hP~Akll~~~a~~qd~~~GDGTTtvvVLA~~Ll-~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~ 140 (515)
T 3iyg_E 62 DHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALL-EEAEQLLDRGIHPIRIADGYEQAARIAIEHLDKISDSVLVDMKNT 140 (515)
T ss_pred CCHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHH-HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhceecCCCccCH
Confidence 789999999999999999999 88999999988 77888888897 88999999999999999998765322 1
Q ss_pred HHHHhhccc--------hhhHHHHHHHHHhh---cCCccceeeecCCCcceeecccccccccccchhhHhhhhhhcchhh
Q psy16434 531 KTLAENTGV--------KSNEVISKLYSAHN---EGKKTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAANTI 599 (745)
Q Consensus 531 r~LaeNAGl--------d~~~vlsKL~~~h~---~g~~~~GIDl~~~~ikI~dm~g~gI~Ds~lVkG~vL~~A~e~a~mi 599 (745)
..|++-|.. ...+.++++-...- .....-.+|+ +.++|.++.|+++.|+.+++|++|++...+..|+
T Consensus 141 ~~l~~vA~tsl~sK~i~~~~~~l~~l~~dav~~V~~~~~~~~d~--~~I~I~k~~Ggs~~ds~lv~G~~~dk~~~~~~m~ 218 (515)
T 3iyg_E 141 EPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMQRRDVDF--ELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMP 218 (515)
T ss_pred HHHHHHHHHHhcccchhHHHHHHHHHHHHHHHhhcccccCCCCc--ccEEEEEecCCCcccceEEeeEEEeccccccccc
Confidence 223222100 01122222211100 0000001333 3359999999999999999999999999999999
Q ss_pred cccccceeeeeccCcccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCcccHHHHHHHHHcCCe
Q psy16434 600 LQQTKAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAKFGDMALHYLNKYGLM 679 (745)
Q Consensus 600 l~IDn~kIlll~~~Le~~k~e~~~~v~i~s~~el~~~~~~E~~~i~~~V~~I~~~gvnVVl~~~~I~d~al~~L~k~gIl 679 (745)
++++++++++++|||++.++++++++.+++++++++|.++|+++++.++++|++.|++|||++++|+++|+|||.++||+
T Consensus 219 ~~~~~~kIall~~~le~~k~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I~~~al~~L~~~~I~ 298 (515)
T 3iyg_E 219 KQVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGFDDEANHLLLQNDLP 298 (515)
T ss_pred ccCCCceEEEEcCccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHCCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCHHHHHHHHHHhCCeecccCCCCCCCCCcccCCceEe--cc--cccCccccc
Q psy16434 680 GVRLNSKFDLRRLCKAVNATALPRLVSTYIKMPSFCPAPPVQ--GR--ERDRPAQTC 732 (745)
Q Consensus 680 ~ir~v~k~dLeRIaraTGA~ivssld~l~~~~LG~c~~~~~~--~~--e~~~~~~~~ 732 (745)
+++++++++|+|||++|||+++++++++.+++||+|++|++. |. ++|.+.+.|
T Consensus 299 ~v~~v~k~~le~ia~~tGa~ii~~l~~l~~~~LG~a~~v~~~~ig~~k~~~~~~~g~ 355 (515)
T 3iyg_E 299 AVRWVGGPEIELIAIATGGRIVPRFSELTAEKLGFAGLVKEISFGTTKDKMLVIEQC 355 (515)
T ss_pred EEeccCHHHHHHHHHHhCCEEecccccCCHHHCCcceEEEEEEeccccceEEEEEcC
Confidence 999999999999999999999999999999999999999995 44 677665544
No 35
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=99.97 E-value=3.4e-32 Score=309.15 Aligned_cols=273 Identities=24% Similarity=0.257 Sum_probs=188.2
Q ss_pred CCCCcccccccccEEEEEECC--eeEEEEEecccccceeEEEEcCC-chhhHHHHHHHHHHHHHHHHHHHHHH----H--
Q psy16434 460 TPPAASELGYADSVAVDELGD--TAVVVFKLEAAESRIATLVIRGA-TENYMDDIERAVDDGVNTFKGITKVF----V-- 530 (745)
Q Consensus 460 ~~p~a~~LG~a~~vq~~eiGd--tsvti~~g~~l~~~a~TIIlrG~-t~~IldE~eral~DAL~vlk~~~~~I----P-- 530 (745)
+||.++++.++++.|++++|| |++++|+|+.+ ..+..++-+|. |..|.++++++++.|++.++.....+ .
T Consensus 25 ~hP~Akll~e~a~~qd~e~GDGTTtvvvLa~~LL-~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~ 103 (500)
T 3aq1_B 25 QHPAAKMIVEVSKTQDAEVGDGTTTAAVLSGELL-SKAEELIMKGVHSTIISEGYRHAAEKCREILETITIAISPDDEAA 103 (500)
T ss_dssp ------------------CCHHHHHHHHHHHHHH-HHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHH
T ss_pred CCHHHHHHHHHHHhhhhhhCCChHHHHHHHHHHH-HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcHHH
Confidence 789999999999999999999 89999999988 77777888887 88999999999999999998765311 1
Q ss_pred -HHHHhhc---cc--hhhHHHHHHHHHhhcCCccc--ee-eec-CCCcceeecccccccccccchhhHhhhhhhcchhhc
Q psy16434 531 -KTLAENT---GV--KSNEVISKLYSAHNEGKKTY--GF-DIN-GENSSVIDAAEAGILDLYLTKMWALKYATSAANTIL 600 (745)
Q Consensus 531 -r~LaeNA---Gl--d~~~vlsKL~~~h~~g~~~~--GI-Dl~-~~~ikI~dm~g~gI~Ds~lVkG~vL~~A~e~a~mil 600 (745)
..++..+ -. ...+.+.++....-..-..- |. +++ .+++++.++.|+++.|+.+++|++|++...+..|++
T Consensus 104 l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~ 183 (500)
T 3aq1_B 104 LIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKRAGGSIDDSELIDGLVIDKERSHPNMPE 183 (500)
T ss_dssp HHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEEESSCGGGCEEESEEEESCCCSSTTSCS
T ss_pred HHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEEecCCCccceEEEeeeEEeecCCCCCCcc
Confidence 2222211 00 12344445433221110000 11 111 122588899999999999999999999999999999
Q ss_pred ccccceeeeeccCcccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCcccHHHHHHHHHcCCeE
Q psy16434 601 QQTKAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAKFGDMALHYLNKYGLMG 680 (745)
Q Consensus 601 ~IDn~kIlll~~~Le~~k~e~~~~v~i~s~~el~~~~~~E~~~i~~~V~~I~~~gvnVVl~~~~I~d~al~~L~k~gIl~ 680 (745)
+++||+|++++++||++++++++++.++++++++.+.++|+++++.++++|+++|+||||++++|+++|+|||.++||++
T Consensus 184 ~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~a 263 (500)
T 3aq1_B 184 KVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMREMAEKVIASGANVVFCQKGIDDMAQYYIEKAGIYA 263 (500)
T ss_dssp EEEEEEEEEESSCBCC-------------------------CHHHHHHHHHHTTCCSEEEESSCBCHHHHHHHHHTTCEE
T ss_pred cccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEECCCcCHHHHHHHHHCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCHHHHHHHHHHhCCeecccCCCCCCCCCcccCCceEe--cccccCcccccc
Q psy16434 681 VRLNSKFDLRRLCKAVNATALPRLVSTYIKMPSFCPAPPVQ--GRERDRPAQTCK 733 (745)
Q Consensus 681 ir~v~k~dLeRIaraTGA~ivssld~l~~~~LG~c~~~~~~--~~e~~~~~~~~~ 733 (745)
++++++++|+|||++|||+++++++++.+++||+|++|++. |+++|++.+.|.
T Consensus 264 v~~~~k~~le~ia~~tGa~iis~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~ 318 (500)
T 3aq1_B 264 VRRVKKSDLKRLSKVTGATIIQDLDQITTEDVGTAGLVEEKEVRGGKMTYVTGCQ 318 (500)
T ss_dssp ECSCCHHHHHHHHHHHCCCCBSCTTCCCSTTCEEEEEEEEEECSSSEEEEEEEET
T ss_pred EEeCCHHHHHHHHHHhCCeEecccccCCHhHCCCceEEEEEEecCeEEEEEECCC
Confidence 99999999999999999999999999999999999999996 789988766653
No 36
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=99.97 E-value=7.4e-33 Score=317.51 Aligned_cols=271 Identities=21% Similarity=0.240 Sum_probs=228.8
Q ss_pred CCCCcccccccccEEEEEECC--eeEEEEEecccccceeEEEEcCC-chhhHHHHHHHHHHHHHHHHHHHHHH----HHH
Q psy16434 460 TPPAASELGYADSVAVDELGD--TAVVVFKLEAAESRIATLVIRGA-TENYMDDIERAVDDGVNTFKGITKVF----VKT 532 (745)
Q Consensus 460 ~~p~a~~LG~a~~vq~~eiGd--tsvti~~g~~l~~~a~TIIlrG~-t~~IldE~eral~DAL~vlk~~~~~I----Pr~ 532 (745)
+||.++++.++++.|++++|| |++++|+|+.+ ..+..++-+|. |..|.++++++++.|++.++.....+ ...
T Consensus 73 ~hP~Akll~e~a~~qd~e~GDGTTtvvvLA~~LL-~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~ 151 (543)
T 1a6d_B 73 EHPAAKMMVEVSKTQDSFVGDGTTTAVIIAGGLL-QQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTKIGADEKAL 151 (543)
T ss_dssp CSHHHHHHHHHHTCTTCCCTTHHHHHHHHHHHHH-HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTHHHH
T ss_pred cchHHHHHHHHHHhcCCEECCChhHHHHHHHHHH-HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHH
Confidence 789999999999999999999 89999999988 77778888897 88999999999999999998765311 111
Q ss_pred HHhhcc------c--hhhHHHHHHHHHh-----hcCCccceeeecCCCcceeecccccccccccchhhHhhhhhhcchhh
Q psy16434 533 LAENTG------V--KSNEVISKLYSAH-----NEGKKTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAANTI 599 (745)
Q Consensus 533 LaeNAG------l--d~~~vlsKL~~~h-----~~g~~~~GIDl~~~~ikI~dm~g~gI~Ds~lVkG~vL~~A~e~a~mi 599 (745)
|..-|. . ...+.+.++.... .+.....-+|++ .+++.++.|+++.|+.+++|++|++...+..|+
T Consensus 152 l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~--~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~ 229 (543)
T 1a6d_B 152 LLKMAQTSLNSKSASVAKDKLAEISYEAVKSVAELRDGKYYVDFD--NIQVVKKQGGAIDDTQLINGIIVDKEKVHPGMP 229 (543)
T ss_dssp HHHHHHHHHTTSGGGGGHHHHHHHHHHHHHHHEEECSSSEEECGG--GEEEEEEESSCGGGCEEESEEEESCCCSSTTSC
T ss_pred HHHHHHHHhccccccccHHHHHHHHHHHHHHhcccccCCcccccc--eEEEEEecCCCccceeEEccEEEecCCCCCCCc
Confidence 211110 0 1123333332211 000000113432 358999999999999999999999999999999
Q ss_pred cccccceeeeeccCcccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCcccHHHHHHHHHcCCe
Q psy16434 600 LQQTKAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAKFGDMALHYLNKYGLM 679 (745)
Q Consensus 600 l~IDn~kIlll~~~Le~~k~e~~~~v~i~s~~el~~~~~~E~~~i~~~V~~I~~~gvnVVl~~~~I~d~al~~L~k~gIl 679 (745)
++++|++|++++++||++++++++++.++++++++.|.++|+++++.++++|+++|++|||++++|+++|+|||.++||+
T Consensus 230 ~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~ 309 (543)
T 1a6d_B 230 DVVKDAKIALLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRAGIY 309 (543)
T ss_dssp SEEEEEEEEEESSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHTTCE
T ss_pred ceecCCeEEEEecccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCcCHHHHHHHHHCCee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCHHHHHHHHHHhCCeecccCCCCCCCCCcccCCceEe--cccccCcccccc
Q psy16434 680 GVRLNSKFDLRRLCKAVNATALPRLVSTYIKMPSFCPAPPVQ--GRERDRPAQTCK 733 (745)
Q Consensus 680 ~ir~v~k~dLeRIaraTGA~ivssld~l~~~~LG~c~~~~~~--~~e~~~~~~~~~ 733 (745)
+++++++++|+|||++|||+++++++++.+++||+|+.|++. |+++|.+.+.|.
T Consensus 310 av~~v~k~~le~ia~~tGa~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~ 365 (543)
T 1a6d_B 310 AVRRVKKSDMDKLAKATGASIVSTIDEISSSDLGTAERVEQVKVGEDYMTFVTGCK 365 (543)
T ss_dssp EECSCCHHHHHHHHHHHTCCEESCGGGCCGGGCEEEEEEEEEEETTEEEEEEEEES
T ss_pred EeccCCHHHHHHHHHHhCCceecccccCCHHHCCCceEEEEEEecCceEEEEecCC
Confidence 999999999999999999999999999999999999999996 889988766653
No 37
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=99.97 E-value=1.4e-31 Score=308.07 Aligned_cols=283 Identities=28% Similarity=0.428 Sum_probs=232.7
Q ss_pred EEEeccCCCccccccCCCCCcccccccccEEEEEECC--eeEEEEEecccccceeEEEEcCC-chhhHHHHHHHHHHHHH
Q psy16434 444 IAVYTCPVDIATTETKTPPAASELGYADSVAVDELGD--TAVVVFKLEAAESRIATLVIRGA-TENYMDDIERAVDDGVN 520 (745)
Q Consensus 444 Ilil~~~Le~~k~e~k~~p~a~~LG~a~~vq~~eiGd--tsvti~~g~~l~~~a~TIIlrG~-t~~IldE~eral~DAL~ 520 (745)
+.++|..-...+.-.-+||.++++.++++.|++++|| |++++|+++.+ ..+..++-+|. |..|.++++.+++.|++
T Consensus 62 ~~ITnDG~TIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLa~~Ll-~~a~~ll~~GihP~~I~~G~~~A~~~a~e 140 (568)
T 3p9d_H 62 IIITNDAATMLRELDIVHPAVKVLVMATEQQKIDMGDGTNLVMILAGELL-NVSEKLISMGLSAVEIIQGYNMARKFTLK 140 (568)
T ss_dssp EEEESCHHHHTTTCCCCCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHH-HHHHHHHHHTCCHHHHHHHHHHHHHHHHH
T ss_pred eEEeCCHHHHHHHcccCCHHHHHHHHHHHhhhceeCCCceehHHHHHHHH-HHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Confidence 4445543233332223789999999999999999999 88999999988 77777778887 88899999999999999
Q ss_pred HHHHHHHHH------H---HHHHhhc------cchhhHHHHHHHHHhhcC--C------ccceeeecCCCcceeeccccc
Q psy16434 521 TFKGITKVF------V---KTLAENT------GVKSNEVISKLYSAHNEG--K------KTYGFDINGENSSVIDAAEAG 577 (745)
Q Consensus 521 vlk~~~~~I------P---r~LaeNA------Gld~~~vlsKL~~~h~~g--~------~~~GIDl~~~~ikI~dm~g~g 577 (745)
.++.....+ . ..++..+ +.+ +.+.++....-.. . ..-.+|+.. ++|.++.|++
T Consensus 141 ~L~~~a~~v~~~~~~~~~l~~va~tsl~sK~~~~~--~~i~~livdAv~~V~~~~~~~~~~~~~dl~~--I~I~k~~Ggs 216 (568)
T 3p9d_H 141 ELDEMVVGEITDKNDKNELLKMIKPVISSKKYGSE--DILSELVSEAVSHVLPVAQQAGEIPYFNVDS--IRVVKIMGGS 216 (568)
T ss_dssp HHHHHCCSCCCCCCTTHHHHHHHHHHHTTTSTTCH--HHHHHHHHHHHTTSCC---------CCCGGG--CEEEEEESSC
T ss_pred HHHHhccccCCCCCCHHHHHHHHHHHhhccCcchH--HHHHHHHHHHHHHHhhccccccCCcccccce--EEEEEccCCC
Confidence 998765311 0 1122211 212 4445544322110 0 001245443 4999999999
Q ss_pred ccccccchhhHhhhhhhcchhhcccc---cceeeeeccCcccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHc
Q psy16434 578 ILDLYLTKMWALKYATSAANTILQQT---KAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADT 654 (745)
Q Consensus 578 I~Ds~lVkG~vL~~A~e~a~mil~ID---n~kIlll~~~Le~~k~e~~~~v~i~s~~el~~~~~~E~~~i~~~V~~I~~~ 654 (745)
+.|+.+++|++|++..+ .|+++++ +++|++++|+||++++++++++.+++++++++|.++|++++++++++|+++
T Consensus 217 ~~dS~lv~G~v~dk~~~--~m~~~i~~~~n~kIlll~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~ 294 (568)
T 3p9d_H 217 LSNSTVIKGMVFNREPE--GHVKSLSEDKKHKVAVFTCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADM 294 (568)
T ss_dssp GGGCEEESSCCBSSCBS--SGGGSCCCCSSCEEEEECSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cchheeeccEEEeeccc--CCcEEEecCCcceEEEEccCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999998764 7999999 999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEeCCcccHHHHHHHHHcCCeEEEeCCHHHHHHHHHHhCCeecccCCCCCCCCCcccCCceEe--cccccCccccc
Q psy16434 655 GANVVVAGAKFGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNATALPRLVSTYIKMPSFCPAPPVQ--GRERDRPAQTC 732 (745)
Q Consensus 655 gvnVVl~~~~I~d~al~~L~k~gIl~ir~v~k~dLeRIaraTGA~ivssld~l~~~~LG~c~~~~~~--~~e~~~~~~~~ 732 (745)
|+||||++++|+|+|+|||.++||++++++++++|+|||++|||+++++++++.+++||+|+.|++. |.++|++.+.|
T Consensus 295 g~~vvi~~~~I~~~al~~L~~~gI~av~~v~~~~leria~~tGa~ivs~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~ 374 (568)
T 3p9d_H 295 GVECIVAGAGVGELALHYLNRYGILVLKVPSKFELRRLCRVCGATPLPRLGAPTPEELGLVETVKTMEIGGDRVTVFKQE 374 (568)
T ss_dssp TCCEEEECSCCCHHHHHHHHHHTCEEECCCCHHHHHHHHHHHSCCCCSSSSCCCGGGCEECSCCCCCEETTEECBCCCCC
T ss_pred CCeEEEECCCcChHHHHHHHHCCeEEEecCCHHHHHHHHHHhCCEEEeccccCCHHHCCcceEEEEEEecCceEEEEecC
Confidence 9999999999999999999999999999999999999999999999999999999999999999985 78899887776
Q ss_pred c
Q psy16434 733 K 733 (745)
Q Consensus 733 ~ 733 (745)
.
T Consensus 375 ~ 375 (568)
T 3p9d_H 375 Q 375 (568)
T ss_dssp S
T ss_pred C
Confidence 5
No 38
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.96 E-value=1.3e-31 Score=305.51 Aligned_cols=270 Identities=19% Similarity=0.255 Sum_probs=224.4
Q ss_pred CCCCcccccccccEEEEEECC--eeEEEEEecccccceeEEEEcCC-chhhHHHHHHHHHHHHHHHHHHHHHHH----HH
Q psy16434 460 TPPAASELGYADSVAVDELGD--TAVVVFKLEAAESRIATLVIRGA-TENYMDDIERAVDDGVNTFKGITKVFV----KT 532 (745)
Q Consensus 460 ~~p~a~~LG~a~~vq~~eiGd--tsvti~~g~~l~~~a~TIIlrG~-t~~IldE~eral~DAL~vlk~~~~~IP----r~ 532 (745)
+||.++++.++++.|++++|| |++++|+|+.+ ..+..++-+|. |..+.++++.+++.|++.++.....+. ..
T Consensus 63 ~hP~akll~~~a~~qd~~~GDGTTtvvVLA~~Ll-~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~ 141 (518)
T 3iyg_D 63 LHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLL-DSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELSDRET 141 (518)
T ss_pred chHHHHHHHHHHHHhhhhhCCCceeHHHHHHHHH-HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHheeeCCCCChHH
Confidence 789999999999999999999 88899999988 77888888897 889999999999999999988654211 22
Q ss_pred HHhhcc--chh------hHHHHHHHHHhhc--CCc--cceeeecCCCcceeecccccccccccchhhHhhhhhhcchhhc
Q psy16434 533 LAENTG--VKS------NEVISKLYSAHNE--GKK--TYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAANTIL 600 (745)
Q Consensus 533 LaeNAG--ld~------~~vlsKL~~~h~~--g~~--~~GIDl~~~~ikI~dm~g~gI~Ds~lVkG~vL~~A~e~a~mil 600 (745)
|.+-|. +.. .+.+.++....-. +.. .--+|+.. ++|.++.|+.+.|+.+++|++|++...+ .|+.
T Consensus 142 l~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~d~~~--I~V~k~~Gg~~~ds~lv~G~~~dk~~~~-~mp~ 218 (518)
T 3iyg_D 142 LLNSAATSLNSKVVSQYSSLLSPMSVDAVMKVIDPATATSVDLRD--IKIVKKLGGTIDDCELVEGLVLTQKVAN-SGIT 218 (518)
T ss_pred HHHHhHhhhccccchhhHHHHHHHHHHHHHHhhccccCCCcccce--EEEEEcCCCChhhheEeccEEEeccccc-CCCc
Confidence 222110 000 1222222211000 000 00134432 4889999999999999999999999888 9999
Q ss_pred ccccceeeeeccCcccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEe-----CCcccHHHHHHHHH
Q psy16434 601 QQTKAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVA-----GAKFGDMALHYLNK 675 (745)
Q Consensus 601 ~IDn~kIlll~~~Le~~k~e~~~~v~i~s~~el~~~~~~E~~~i~~~V~~I~~~gvnVVl~-----~~~I~d~al~~L~k 675 (745)
+++|+++++++|+||++++++++++.+++++++++|.++|++++.+++++|++.|+||||+ +++|+++|+|||.+
T Consensus 219 ~i~n~kIlll~~~Le~~k~~~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~Al~~L~~ 298 (518)
T 3iyg_D 219 RVEKAKIGLIQFCLSAPKTDMDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNK 298 (518)
T ss_pred cccCceEEEEEeeccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccccccCcCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999 89999999999999
Q ss_pred cCCeEEEeCCHHHHHHHHHHhCCeecccCCCCCCCCCcccCCceEe--cc-cccCcccccc
Q psy16434 676 YGLMGVRLNSKFDLRRLCKAVNATALPRLVSTYIKMPSFCPAPPVQ--GR-ERDRPAQTCK 733 (745)
Q Consensus 676 ~gIl~ir~v~k~dLeRIaraTGA~ivssld~l~~~~LG~c~~~~~~--~~-e~~~~~~~~~ 733 (745)
+||++++++++.+|+|||++|||+++++++++.+++||+|+.|++. +. ++|.+.+.|+
T Consensus 299 ~~I~av~~~~~~~le~ia~~tGa~ii~~l~~l~~~~LG~a~~v~~~~~g~~~~~~~~~g~~ 359 (518)
T 3iyg_D 299 MKIMVVKDIEREDIEFICKTIGTKPVAHVDQFTADMLGSAELAEEVSLNGSGKLIKITGCA 359 (518)
T ss_pred cCcEEEecCCHHHHHHHHHHhCCEEecccccCCHHHCCcCcEEEEEEeCCCceEEEEECCC
Confidence 9999999999999999999999999999999999999999999985 65 6776555553
No 39
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=99.96 E-value=1.9e-32 Score=313.94 Aligned_cols=270 Identities=23% Similarity=0.272 Sum_probs=227.0
Q ss_pred CCCCcccccccccEEEEEECC--eeEEEEEecccccceeEEEEcCC-chhhHHHHHHHHHHHHHHHHHHHHHH----HHH
Q psy16434 460 TPPAASELGYADSVAVDELGD--TAVVVFKLEAAESRIATLVIRGA-TENYMDDIERAVDDGVNTFKGITKVF----VKT 532 (745)
Q Consensus 460 ~~p~a~~LG~a~~vq~~eiGd--tsvti~~g~~l~~~a~TIIlrG~-t~~IldE~eral~DAL~vlk~~~~~I----Pr~ 532 (745)
+||.++++.++++.|++++|| |++++|+++.+ ..+..++-+|. |..|.++++.+++.|++.++.....+ ...
T Consensus 71 ~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll-~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~ 149 (543)
T 3ruv_A 71 EHPAAKMLIEVAKTQEKEVGDGTTTAVVVAGELL-RKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVGAQDKEI 149 (543)
T ss_dssp CCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH-HHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHH
T ss_pred cCHHHHHHHHHHHHHHhhhCCCcccHHHHHHHHH-HHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHH
Confidence 789999999999999999999 88999999988 77777888887 88999999999999999998754311 111
Q ss_pred HHhhcc--ch------hhHHHHHHHHHhhc--CCccce-eeecCCCcceeecccccccccccchhhHhhhhhhcchhhcc
Q psy16434 533 LAENTG--VK------SNEVISKLYSAHNE--GKKTYG-FDINGENSSVIDAAEAGILDLYLTKMWALKYATSAANTILQ 601 (745)
Q Consensus 533 LaeNAG--ld------~~~vlsKL~~~h~~--g~~~~G-IDl~~~~ikI~dm~g~gI~Ds~lVkG~vL~~A~e~a~mil~ 601 (745)
|..-|. +. ..+.+.++....-. +.. -| +|++. ++|.+..|+++.|+.+++|++|++...+..|+++
T Consensus 150 L~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~-~g~~dl~~--I~V~k~~Gg~~~ds~lv~G~v~dk~~~~~~m~~~ 226 (543)
T 3ruv_A 150 LTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDD-EGKVDKDL--IKIEKKSGASIDDTELIKGVLVDKERVSAQMPKK 226 (543)
T ss_dssp HHHHHHHHHHHTCGGGCCHHHHHHHHHHHHHHCCT-TSCCCGGG--EEEEEEECSCGGGCEEESSEEESCCCSCTTSCSE
T ss_pred HHHHHHHHhcccccchhHHHHHHHHHHHHHHhhcc-CCCcccce--EEEEEcCCCCcccceeecceEEeccccCcccccc
Confidence 211110 00 01223333221100 000 02 45443 4889999999999999999999999999999999
Q ss_pred cccceeeeeccCcccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCcccHHHHHHHHHcCCeEE
Q psy16434 602 QTKAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAKFGDMALHYLNKYGLMGV 681 (745)
Q Consensus 602 IDn~kIlll~~~Le~~k~e~~~~v~i~s~~el~~~~~~E~~~i~~~V~~I~~~gvnVVl~~~~I~d~al~~L~k~gIl~i 681 (745)
++|++|+++++|||++++++++++.+++++++++++++|++++++++++|+++|+||||++++|+++|+|||.++||+++
T Consensus 227 ~~n~kIll~~~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~gI~~v 306 (543)
T 3ruv_A 227 VTDAKIALLNCAIEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAA 306 (543)
T ss_dssp EEEEEEEEESSCBSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHTTCEEE
T ss_pred ccCcEEEEEcccccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccHHHHHHHHHcCcEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCHHHHHHHHHHhCCeecccCCCCCCCCCcccCCceEe--cccccCcccccc
Q psy16434 682 RLNSKFDLRRLCKAVNATALPRLVSTYIKMPSFCPAPPVQ--GRERDRPAQTCK 733 (745)
Q Consensus 682 r~v~k~dLeRIaraTGA~ivssld~l~~~~LG~c~~~~~~--~~e~~~~~~~~~ 733 (745)
+++++++|+|||++|||+++++++++..++||+|+.|++. |+++|.+.+.|.
T Consensus 307 ~~v~k~~le~ia~~tGa~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~ 360 (543)
T 3ruv_A 307 RRVKKSDMEKLAKATGANVIAAIAALSAQDLGDAGLVEERKISGDSMIFVEECK 360 (543)
T ss_dssp CSCCHHHHHHHHHHHCCCEESCGGGCCGGGCEEEEEEEEEEETTEEEEEEECCS
T ss_pred eeCCHHHHHHHHHHhCCceecccccCCHHHCCcccEEEEEEeCCceEEEEECCC
Confidence 9999999999999999999999999999999999999996 788887666553
No 40
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=99.96 E-value=7.5e-32 Score=309.37 Aligned_cols=287 Identities=25% Similarity=0.286 Sum_probs=234.9
Q ss_pred EEEeccCCCccccccCCCCCcccccccccEEEEEECC--eeEEEEEecccccceeEEEEcCC-chhhHHHHHHHHHHHHH
Q psy16434 444 IAVYTCPVDIATTETKTPPAASELGYADSVAVDELGD--TAVVVFKLEAAESRIATLVIRGA-TENYMDDIERAVDDGVN 520 (745)
Q Consensus 444 Ilil~~~Le~~k~e~k~~p~a~~LG~a~~vq~~eiGd--tsvti~~g~~l~~~a~TIIlrG~-t~~IldE~eral~DAL~ 520 (745)
+.++|..-...+.-.-+||.++++.++++.|++++|| |++++|+++.+ ..+..++-+|. |..|.++++.+++.|++
T Consensus 59 ~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLA~~LL-~~a~~ll~~GihP~~I~~G~~~A~~~a~~ 137 (548)
T 1q3q_A 59 IVVTNDCATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELL-RKAEELLDQNIHPSIITKGYALAAEKAQE 137 (548)
T ss_dssp EEEESCHHHHHHHSCCCSHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH-HHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred eEEECCHHHHHHHhhccchHHHHHHHHHHhcCCEECCChhHHHHHHHHHH-HHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Confidence 4444433233332223789999999999999999999 89999999988 77778888887 88999999999999999
Q ss_pred HHHHHHHHH----H---HHHHhhc---cc--hhhHHHHHHHHHhhc--CCc---cceeeecCCCcceeeccccccccccc
Q psy16434 521 TFKGITKVF----V---KTLAENT---GV--KSNEVISKLYSAHNE--GKK---TYGFDINGENSSVIDAAEAGILDLYL 583 (745)
Q Consensus 521 vlk~~~~~I----P---r~LaeNA---Gl--d~~~vlsKL~~~h~~--g~~---~~GIDl~~~~ikI~dm~g~gI~Ds~l 583 (745)
.++.....+ . ..++..+ -. ...+.+.++....-. +.. ..-+|+ +.++|.++.|+++.|+.+
T Consensus 138 ~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~V~~~~~g~~~~d~--~~I~V~k~~G~~~~ds~l 215 (548)
T 1q3q_A 138 ILDEIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDL--DNIKFEKKAGEGVEESEL 215 (548)
T ss_dssp HHHHHCEECCTTCHHHHHHHHHHHSCSSTTGGGHHHHHHHHHHHHHHHCEESSSSEECCG--GGEEEEEEEBSCGGGCEE
T ss_pred HHHHhcCCCCCCCHHHHHHHHHHHhhccccccchHHHHHHHHHHHHHhccccCCCccccC--CeEEEEEecCCCccceEE
Confidence 998765311 1 1222211 00 112333333221100 000 011333 345899999999999999
Q ss_pred chhhHhhhhhhcchhhcccccceeeeeccCcccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCC
Q psy16434 584 TKMWALKYATSAANTILQQTKAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGA 663 (745)
Q Consensus 584 VkG~vL~~A~e~a~mil~IDn~kIlll~~~Le~~k~e~~~~v~i~s~~el~~~~~~E~~~i~~~V~~I~~~gvnVVl~~~ 663 (745)
++|++|++...+..|+++++|++|++++++||++++++++++.++++++++.+.++|+++++.++++|+++|++|||+++
T Consensus 216 v~G~v~dk~~~~~~m~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~ 295 (548)
T 1q3q_A 216 VRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQK 295 (548)
T ss_dssp ESSEEESCCCSSTTSCSEESSEEEEEECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEESS
T ss_pred EeeEEEeccCCCCCCcceecCCEEEEEecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEEcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccHHHHHHHHHcCCeEEEeCCHHHHHHHHHHhCCeecccCCCCCCCCCcccCCceEe--cccccCcccccc
Q psy16434 664 KFGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNATALPRLVSTYIKMPSFCPAPPVQ--GRERDRPAQTCK 733 (745)
Q Consensus 664 ~I~d~al~~L~k~gIl~ir~v~k~dLeRIaraTGA~ivssld~l~~~~LG~c~~~~~~--~~e~~~~~~~~~ 733 (745)
+|+|+|+|||.++||++++++++++|+|||++|||+++++++++.+++||+|+.|++. |+++|++.+.|.
T Consensus 296 ~I~~~al~~L~~~~I~av~~~~k~~le~ia~~tGa~ii~~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~ 367 (548)
T 1q3q_A 296 GIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCK 367 (548)
T ss_dssp CBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHCCCCBSSGGGCCGGGCEEESEEEEEEETTEEEEEEECCS
T ss_pred CcCHHHHHHHHHCCcEEEccCCHHHHHHHHHHhCCeEecccccCCHHHCCCceEEEEEEecCceEEEEecCC
Confidence 9999999999999999999999999999999999999999999999999999999996 889988766553
No 41
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=99.96 E-value=1e-31 Score=308.25 Aligned_cols=270 Identities=19% Similarity=0.274 Sum_probs=227.7
Q ss_pred CCCCcccccccccEEEEEECC--eeEEEEEecccccceeEEEEcCC-chhhHHHHHHHHHHHHHHHHHHHHHH----H--
Q psy16434 460 TPPAASELGYADSVAVDELGD--TAVVVFKLEAAESRIATLVIRGA-TENYMDDIERAVDDGVNTFKGITKVF----V-- 530 (745)
Q Consensus 460 ~~p~a~~LG~a~~vq~~eiGd--tsvti~~g~~l~~~a~TIIlrG~-t~~IldE~eral~DAL~vlk~~~~~I----P-- 530 (745)
+||.++++.++++.|++++|| |++++|+++.+ ..+..++-+|. |..|.++++.+++.|++.|+.....+ .
T Consensus 82 ~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~eLL-~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~e~ 160 (553)
T 3ko1_A 82 QHPAAKLLVQIAKGQDEETADGTKTAVIFSGELV-KKAEDLLYKDVHPTIIISGYKKAEEVALQTIQELAQTVSINDTDL 160 (553)
T ss_dssp CSHHHHHHHHHHHTCSSSSSTTHHHHHHHHHHHH-HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCEECCTTCHHH
T ss_pred cChhHHHHHHHhhCCcccccCCceeEEEehHHHH-HhHHHHHhcCCCceEEehhhhHHHHHHHHHHHHhcCCCCCCcHHH
Confidence 789999999999999999999 88999999988 77888888887 88999999999999999998654200 0
Q ss_pred -HHHHhhc--c-c--hhhHHHHHHHHHh-----hcCCccceeeecCCCcceeecccccccccccchhhHhhhhhhcchhh
Q psy16434 531 -KTLAENT--G-V--KSNEVISKLYSAH-----NEGKKTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAANTI 599 (745)
Q Consensus 531 -r~LaeNA--G-l--d~~~vlsKL~~~h-----~~g~~~~GIDl~~~~ikI~dm~g~gI~Ds~lVkG~vL~~A~e~a~mi 599 (745)
..++..+ | . ...+.+.++.... .+......+|+++ ++|.++.|+++.|+.+++|++|++...+..|+
T Consensus 161 L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~G~~~~dl~~--I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~m~ 238 (553)
T 3ko1_A 161 LRKIAMTSLSSKAVAGAREYIADIVVKAVTQVAELRGDKWYVDLDN--IQIVKKAGGSINDTQLVYGIVVDKEVVHPGMP 238 (553)
T ss_dssp HHHHHHHHHTTSSCCTTHHHHHHHHHHHHHHHCCCTTSSCCCCGGG--EEEEECCCSCGGGCEEESEEEECSCBSCTTSC
T ss_pred HHHHHHHHhhHHhhhhHHHHHHHHHHHHHHHHHHhcCCceEEechh--HHHHHHhCCccccceeeEEEEecccccCCCCc
Confidence 1122111 0 0 0123333332211 1100111245543 48999999999999999999999999999999
Q ss_pred cccccceeeeeccCcccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCcccHHHHHHHHHcCCe
Q psy16434 600 LQQTKAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAKFGDMALHYLNKYGLM 679 (745)
Q Consensus 600 l~IDn~kIlll~~~Le~~k~e~~~~v~i~s~~el~~~~~~E~~~i~~~V~~I~~~gvnVVl~~~~I~d~al~~L~k~gIl 679 (745)
++++|++|+++++|||++++++++++.+++++++++++++|++++++++++|+++|+||||++++|+|+|+|||.++||+
T Consensus 239 ~~ien~kIll~d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI~~~~I~~~al~~L~~~gI~ 318 (553)
T 3ko1_A 239 KRLENAKIALIDASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVIICQKGIDEVAQSYLAKKGVL 318 (553)
T ss_dssp SCCBSCEEEEECSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSSCBCSHHHHHHHHHTCE
T ss_pred cccccceEEEecCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceEEEeccChHHHHHHHHHhcchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCHHHHHHHHHHhCCeecccCCCCCCCCCcccCCceEe--cccccCccccc
Q psy16434 680 GVRLNSKFDLRRLCKAVNATALPRLVSTYIKMPSFCPAPPVQ--GRERDRPAQTC 732 (745)
Q Consensus 680 ~ir~v~k~dLeRIaraTGA~ivssld~l~~~~LG~c~~~~~~--~~e~~~~~~~~ 732 (745)
+++++++++|+|||++|||+++++++++.+++||+|+.|++. |+++|.+.+.|
T Consensus 319 ~v~~v~k~~leria~~tGa~ivs~l~~l~~~~LG~a~~v~~~~ig~d~~~~i~g~ 373 (553)
T 3ko1_A 319 AVRRAKKSDLEKLARATGGRVVSNIDEISEQDLGYASLIEERKVGEDKMVFVEGA 373 (553)
T ss_dssp EECCCCHHHHHHHHTTTTCCEESCGGGCCSSSSEECSEEECCCCSSSCCEEEESC
T ss_pred hhhhhhhhhHHHHHHhhCCeeecccccCChhhcchHHHHHHhhcCcceEEEeccC
Confidence 999999999999999999999999999999999999999996 78888766555
No 42
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=99.96 E-value=1.7e-32 Score=314.78 Aligned_cols=267 Identities=16% Similarity=0.177 Sum_probs=224.6
Q ss_pred CCCCcccccccccEEEEEECC--eeEEEEEecccccceeEEEEcCC-chhhHHHHHHHHHHHHHHHHHHHHHH------H
Q psy16434 460 TPPAASELGYADSVAVDELGD--TAVVVFKLEAAESRIATLVIRGA-TENYMDDIERAVDDGVNTFKGITKVF------V 530 (745)
Q Consensus 460 ~~p~a~~LG~a~~vq~~eiGd--tsvti~~g~~l~~~a~TIIlrG~-t~~IldE~eral~DAL~vlk~~~~~I------P 530 (745)
+||.++++.++++.|++++|| |++++|+|+.+ ..+..++-+|. |..|.++++++++.|++.++.....+ .
T Consensus 69 ~hP~akll~e~a~~qd~e~GDGTTtvvVLA~eLL-~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~ 147 (546)
T 3p9d_F 69 QSPTAVLIARAAAAQDEITGDGTTTVVCLVGELL-RQAHRFIQEGVHPRIITDGFEIARKESMKFLDEFKISKTNLSNDR 147 (546)
T ss_dssp CCHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHH-HHHHHHTTTTBCHHHHHHHHHHHHHHHHHHHHHHCCCCSSSSTTC
T ss_pred cCHHHHHHHHHHHHHHHHhCCCcccHHHHHHHHH-HHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhhccccccccCH
Confidence 789999999999999999999 89999999988 77777888887 88999999999999999998764311 0
Q ss_pred HHHHhhccchhhHHHHHHHHHhhcCCccc--------------eeeecCCCcceeecccccccccccchhhHhhhhhhcc
Q psy16434 531 KTLAENTGVKSNEVISKLYSAHNEGKKTY--------------GFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAA 596 (745)
Q Consensus 531 r~LaeNAGld~~~vlsKL~~~h~~g~~~~--------------GIDl~~~~ikI~dm~g~gI~Ds~lVkG~vL~~A~e~a 596 (745)
..|..-| .+++.+|+.+.+++.+..+ .+|++. ++++++.|+.+.|+.+++|++|++...+.
T Consensus 148 ~~L~~vA---~tsl~sKi~~~~~d~la~l~vdaV~~V~~~~~~~~dl~~--I~i~ki~Gg~~~ds~lv~G~v~dk~~~~~ 222 (546)
T 3p9d_F 148 EFLLQVA---RSSLLTKVDADLTEVLTPIVTDAVLSVYDAQADNLDLHM--VEIMQMQHLSPKDTTFIKGLVLDHGGRHP 222 (546)
T ss_dssp HHHHHHH---HHHTCSTTHHHHCSSHHHHHHHHHHHTHHHHHTTCCGGG--EEEECCCCSCTTTCCCCSSCEESCCCCSS
T ss_pred HHHHHHH---HHHhCCCcchhHHHHHHHHHHHhheEeecCCCCcccchh--eEEEEecCCCccccEEEeeEEEecccccc
Confidence 1222111 1111122222222222111 134433 48999999999999999999999999999
Q ss_pred hhhcccccceeeeeccCcccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcC----------CcEEEeCCccc
Q psy16434 597 NTILQQTKAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTG----------ANVVVAGAKFG 666 (745)
Q Consensus 597 ~mil~IDn~kIlll~~~Le~~k~e~~~~v~i~s~~el~~~~~~E~~~i~~~V~~I~~~g----------vnVVl~~~~I~ 666 (745)
.|+++++||+|++++|||||+++++++++.++++++++.|.++|++++++++++|+.++ ++|||++++|+
T Consensus 223 ~m~~~~en~kIll~~~~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~ 302 (546)
T 3p9d_F 223 DMPTRVKNAYVLILNVSLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGID 302 (546)
T ss_dssp SSCSSBCSCCCCEECCCSSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-----------CEEEESSCCC
T ss_pred cCcceecCceEEEecCcccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCceEEEecCcCc
Confidence 99999999999999999999999999999999999999999999999999999999876 34999999999
Q ss_pred HHHHHHHHHcCCeEEEeCCHHHHHHHHHHhCCeecccCCCCCCCCCcccCCceEe--cccccCccccc
Q psy16434 667 DMALHYLNKYGLMGVRLNSKFDLRRLCKAVNATALPRLVSTYIKMPSFCPAPPVQ--GRERDRPAQTC 732 (745)
Q Consensus 667 d~al~~L~k~gIl~ir~v~k~dLeRIaraTGA~ivssld~l~~~~LG~c~~~~~~--~~e~~~~~~~~ 732 (745)
|+|+|||.++||+++|++++++|+|||++|||+++++++++.+++||+|+.|++. |+++|++...|
T Consensus 303 ~~Al~~L~~~gI~~vr~v~~~~leria~~tGa~ii~~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~ 370 (546)
T 3p9d_F 303 PMSLDVFAKHNILALRRAKRRNMERLQLVTGGEAQNSVEDLSPQILGFSGLVYQETIGEEKFTYVTEN 370 (546)
T ss_dssp HHHHHHHTTTTCEEECCCCHHHHHHHHHTTTBCCCCCCSSCSTTCCBCCCCBCBCCCSSCCCEECSSC
T ss_pred HHHHHHHHHCCCeeEecCCHHHHHHHHHHhCCEEecchhhCCHhHCCcccEEEEEEecCceEEEEecC
Confidence 9999999999999999999999999999999999999999999999999999875 88888765554
No 43
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=99.96 E-value=4.6e-32 Score=311.11 Aligned_cols=286 Identities=16% Similarity=0.184 Sum_probs=231.3
Q ss_pred EEEeccCCCccccccCCCCCcccccccccEEEEEECC--eeEEEEEecccccceeEEEEcCC-chhhHHHHHHHHHHHHH
Q psy16434 444 IAVYTCPVDIATTETKTPPAASELGYADSVAVDELGD--TAVVVFKLEAAESRIATLVIRGA-TENYMDDIERAVDDGVN 520 (745)
Q Consensus 444 Ilil~~~Le~~k~e~k~~p~a~~LG~a~~vq~~eiGd--tsvti~~g~~l~~~a~TIIlrG~-t~~IldE~eral~DAL~ 520 (745)
+.++|..-...+.-.-+||.++++.++++.|++++|| |++++|+++.+ ..+..++-+|. |..|.++++.+++.|++
T Consensus 60 ~~ITnDG~TIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll-~~a~~lv~~GihP~~I~~G~~~A~~~a~~ 138 (550)
T 3p9d_G 60 TTISNDGATILKLLDVVHPAAKTLVDISRAQDAEVGDGTTSVTILAGELM-KEAKPFLEEGISSHLIMKGYRKAVSLAVE 138 (550)
T ss_dssp EEEECCHHHHTTTSCCCSHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHH-HTTSHHHHSSSCTTHHHHHHHHHHHHHHH
T ss_pred eEEECCHHHHHHHccCCCHHHHHHHHHHHHhhhhhCCCceehHHHHHHHH-HHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Confidence 4455543333333233789999999999999999999 88999999988 78888888897 88999999999999999
Q ss_pred HHHHHHHHH-------HHHHHhhcc--c------hhhHHHHHHHHHhhcCCccceeeecCCCcceeecccccccccccch
Q psy16434 521 TFKGITKVF-------VKTLAENTG--V------KSNEVISKLYSAHNEGKKTYGFDINGENSSVIDAAEAGILDLYLTK 585 (745)
Q Consensus 521 vlk~~~~~I-------Pr~LaeNAG--l------d~~~vlsKL~~~h~~g~~~~GIDl~~~~ikI~dm~g~gI~Ds~lVk 585 (745)
.++.....+ ...|..-|. + ...+.+.++....-..-..-.+|++. ++|.++.|+++.|+.+++
T Consensus 139 ~L~~~s~~v~~~~~~~~~~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~dl~~--I~Vikv~Gg~~~ds~lv~ 216 (550)
T 3p9d_G 139 KINELAVDITSEKSSGRELLERCARTAMSSKLIHNNADFFVKMCVDAVLSLDRNDLDDKL--IGIKKIPGGAMEESLFIN 216 (550)
T ss_dssp HHHHSEECCCCC------CHHHHHHHHHHHTTTGGGHHHHHHHHHHHHHHCCSSSCCGGG--CCCCBCCSSCGGGCCCCS
T ss_pred HHHHhcccCCCCcchhHHHHHHHHHHhccCccccccHhHHHHHHHHHHHHhCccccCchh--eeEEEecCCCccceeEEe
Confidence 998643211 111211110 0 01122333322110000000144443 488999999999999999
Q ss_pred hhHhhhhhhcc---hhhcccccceeeeeccCcccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeC
Q psy16434 586 MWALKYATSAA---NTILQQTKAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAG 662 (745)
Q Consensus 586 G~vL~~A~e~a---~mil~IDn~kIlll~~~Le~~k~e~~~~v~i~s~~el~~~~~~E~~~i~~~V~~I~~~gvnVVl~~ 662 (745)
|++|++...+. .|+++++||+|++++++||++++++++++.+++++++++++++|++++++++++|++.|++||+++
T Consensus 217 G~~~dk~~~s~yf~~~~~~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vVi~~ 296 (550)
T 3p9d_G 217 GVAFKKTFSYAGFEQQPKKFNNPKILSLNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSK 296 (550)
T ss_dssp SEEECCCSSCTTCSCSCSCCSSCCEEEECSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEEEES
T ss_pred eEEEeccccccccccCcccccCceEEEeccccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEC
Confidence 99999887765 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccHHHHHHHHHcCCeEEEeCCHHHHHHHHHHhCCeecccCCCCCCCCCcccCCceEe--cccccCccccc
Q psy16434 663 AKFGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNATALPRLVSTYIKMPSFCPAPPVQ--GRERDRPAQTC 732 (745)
Q Consensus 663 ~~I~d~al~~L~k~gIl~ir~v~k~dLeRIaraTGA~ivssld~l~~~~LG~c~~~~~~--~~e~~~~~~~~ 732 (745)
++|+|+|+|||+++||++++++++++|+|||++|||+++++++++.++.||+|+.|+++ +.|+|.+-..|
T Consensus 297 ~~I~dla~~~L~~~gI~~v~~v~k~~lerIa~~tGa~iis~l~~l~~~~LG~a~~v~~~~ig~e~~~~~~g~ 368 (550)
T 3p9d_G 297 LPIGDLATQFFADRNIFCAGRVSADDMNRVIQAVGGSIQSTTSDIKPEHLGTCALFEEMQIGSERYNLFQGC 368 (550)
T ss_dssp SCCCHHHHHTTGGGTCEEEECCCTTHHHHHHHHTCCCCBSSGGGCCGGGCCCCSBCCCCCCSSSCCEEEBCC
T ss_pred CCccHHHHHHHHHcCCccccCcCHHHHHHHHHHhCCceecchhhCCHHHcCCceEEEEEEeCCeEEEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999996 88898766554
No 44
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=99.96 E-value=6.7e-31 Score=301.28 Aligned_cols=287 Identities=22% Similarity=0.242 Sum_probs=233.7
Q ss_pred EEEeccCCCccccccCCCCCcccccccccEEEEEECC--eeEEEEEecccccceeEEEEcCC-chhhHHHHHHHHHHHHH
Q psy16434 444 IAVYTCPVDIATTETKTPPAASELGYADSVAVDELGD--TAVVVFKLEAAESRIATLVIRGA-TENYMDDIERAVDDGVN 520 (745)
Q Consensus 444 Ilil~~~Le~~k~e~k~~p~a~~LG~a~~vq~~eiGd--tsvti~~g~~l~~~a~TIIlrG~-t~~IldE~eral~DAL~ 520 (745)
+.++|..-...+.-.-+||.++++.++++.|++++|| |++++|+++.+ ..+..++-+|. |..|.++++.+++.|++
T Consensus 58 ~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLA~~LL-~~a~~ll~~GihP~~I~~G~~~A~~~a~~ 136 (545)
T 1a6d_A 58 IIISNDGATILKEMDVEHPTAKMIVEVSKAQDTAVGDGTTTAVVLSGELL-KQAETLLDQGVHPTVISNGYRLAVNEARK 136 (545)
T ss_dssp EEEECCHHHHHHHSCCCSHHHHHHHGGGGCTTTCSTTHHHHHHHHHHHHH-HHHHHHHHHTCCHHHHHHHHHHHHHHHHH
T ss_pred eEEeCcHHHHHHhhhccchHHHHHHHHHHhcCCEECCChhHHHHHHHHHH-HHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Confidence 4444433233332223789999999999999999999 89999999988 77777888887 88999999999999999
Q ss_pred HHHHHHHH-----HHHHHHhhc---cc--hhhHHHHHHHHHhhc--CCc---cceeeecCCCcceeecccccccccccch
Q psy16434 521 TFKGITKV-----FVKTLAENT---GV--KSNEVISKLYSAHNE--GKK---TYGFDINGENSSVIDAAEAGILDLYLTK 585 (745)
Q Consensus 521 vlk~~~~~-----IPr~LaeNA---Gl--d~~~vlsKL~~~h~~--g~~---~~GIDl~~~~ikI~dm~g~gI~Ds~lVk 585 (745)
.++..... .-..++..+ -. ...+.+.++....-. +.. ..-+|+ +.++|.++.|+++.|+.+++
T Consensus 137 ~L~~~s~~~~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~--~~I~V~k~~G~~~~ds~lv~ 214 (545)
T 1a6d_A 137 IIDEIAEKSTDDATLRKIALTALSGKNTGLSNDFLADLVVKAVNAVAEVRDGKTIVDT--ANIKVDKKNGGSVNDTQFIS 214 (545)
T ss_dssp HHHHHCEECCCHHHHHHHHHHHTTTSSCCSTHHHHHHHHHHHHHHHCEESSSSEECCG--GGEEEEECCCSCSTTCEEES
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHhcccCCCccccc--ceEEEEEecCCCceeeEEEe
Confidence 99875411 001222211 00 112333333221100 000 011333 34589999999999999999
Q ss_pred hhHhhhhhhcchhhcccccceeeeeccCcccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCcc
Q psy16434 586 MWALKYATSAANTILQQTKAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAKF 665 (745)
Q Consensus 586 G~vL~~A~e~a~mil~IDn~kIlll~~~Le~~k~e~~~~v~i~s~~el~~~~~~E~~~i~~~V~~I~~~gvnVVl~~~~I 665 (745)
|++|++...+..|+++++|++|++++++||++++++++++.++++++++.+.++|+++++.++++|+++|++|||++++|
T Consensus 215 G~v~dk~~~~~~m~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I 294 (545)
T 1a6d_A 215 GIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGI 294 (545)
T ss_dssp EEEESCCCSCTTSCSEEEEEEEEEECSCBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCB
T ss_pred eEEEeccCCCCCCcceecCCEEEEEecCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHcCCeEEEeCCHHHHHHHHHHhCCeecccCCCCCCCCCcccCCceEe--cccccCcccccc
Q psy16434 666 GDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNATALPRLVSTYIKMPSFCPAPPVQ--GRERDRPAQTCK 733 (745)
Q Consensus 666 ~d~al~~L~k~gIl~ir~v~k~dLeRIaraTGA~ivssld~l~~~~LG~c~~~~~~--~~e~~~~~~~~~ 733 (745)
+|+|+|||.++||++++++++++|+|||++|||+++++++++.+++||+|+.|++. |+++|++.+.|.
T Consensus 295 ~~~al~~L~~~~I~av~~~~k~~le~ia~~tGa~iis~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~ 364 (545)
T 1a6d_A 295 DDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDDLTPSVLGEAETVEERKIGDDRMTFVMGCK 364 (545)
T ss_dssp CHHHHHHHHHHTCEEECSCCHHHHHHHHHHHCCCEESSGGGCCGGGCEEEEEEEEEEETTEEEEEEEEES
T ss_pred cHHHHHHHHHCCeeEeccCCHHHHHHHHHHhCCeeecccccCCHHHCCCceEEEEEEecCceEEEEecCC
Confidence 99999999999999999999999999999999999999999999999999999996 789988766553
No 45
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.96 E-value=1.9e-30 Score=295.66 Aligned_cols=269 Identities=37% Similarity=0.499 Sum_probs=224.0
Q ss_pred CCCCcccccccccEEEEEECC--eeEEEEEecccccceeEEEEcCC-chhhHHHHHHHHHHHHHHHHHHHH--HHH----
Q psy16434 460 TPPAASELGYADSVAVDELGD--TAVVVFKLEAAESRIATLVIRGA-TENYMDDIERAVDDGVNTFKGITK--VFV---- 530 (745)
Q Consensus 460 ~~p~a~~LG~a~~vq~~eiGd--tsvti~~g~~l~~~a~TIIlrG~-t~~IldE~eral~DAL~vlk~~~~--~IP---- 530 (745)
+||.++++.++++.|++++|| |++++|+++.+ ..+..++-+|. |..+.++++.+++.|++.++.... ..|
T Consensus 63 ~hP~Akll~e~a~~qd~~~GDGTTtvvVLA~~Ll-~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~~~~~~~~~~~~ 141 (512)
T 3iyg_Q 63 QHPAAKMIVMASHMQEQEVGDGTNFVLVFAGALL-ELAEELLRLGLSVSEVIEGYEIACKKAHEILPDLVCCSAKNLRDV 141 (512)
T ss_pred CCHHHHHHHHHHHHhhhhhCCChhHHHHHHHHHH-HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCH
Confidence 789999999999999999999 88999999988 77878888887 889999999999999999988632 111
Q ss_pred HHHHh---hc----cchhhHHHHHHHHHhhc--CCccceeeecCCCcceeecccccccccccchhhHhhhhhhcchhhcc
Q psy16434 531 KTLAE---NT----GVKSNEVISKLYSAHNE--GKKTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAANTILQ 601 (745)
Q Consensus 531 r~Lae---NA----Gld~~~vlsKL~~~h~~--g~~~~GIDl~~~~ikI~dm~g~gI~Ds~lVkG~vL~~A~e~a~mil~ 601 (745)
..|.+ .+ .....+.+.++....-. +...--+|+.. +++.+++|+++.|+.+++|++|++...+ |+++
T Consensus 142 ~~l~~va~tsl~sK~~~~~~~i~~livdAv~~V~~~~~~i~v~~--I~i~k~~Ggs~~ds~lv~G~~~dk~~~~--~~~~ 217 (512)
T 3iyg_Q 142 DEVSSLLHTSVMSKQYGNEVFLAKLIAQACVSIFPDSGHFNVDN--IRVCKILGSGVHSSSVLHGMVFKKETEG--DVTS 217 (512)
T ss_pred HHHHHHHHHHhCCCCccchHHHHHHHHHHHHHHhccCCcccHhH--eeEeeccCCCcccceEEeeEEEecCcCC--CCcc
Confidence 12211 11 00012333333221100 00000145443 4899999999999999999999988754 9999
Q ss_pred cccceeeeeccCcccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCcccHHHHHHHHHcCCeEE
Q psy16434 602 QTKAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAKFGDMALHYLNKYGLMGV 681 (745)
Q Consensus 602 IDn~kIlll~~~Le~~k~e~~~~v~i~s~~el~~~~~~E~~~i~~~V~~I~~~gvnVVl~~~~I~d~al~~L~k~gIl~i 681 (745)
+++++++++++||++.+++.++++.++++++++++.++|++++++++++|+++|++||+++++|+++++|||.++||+++
T Consensus 218 ~~n~kI~ll~~~le~~~~e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~la~~~l~k~~I~av 297 (512)
T 3iyg_Q 218 VKDAKIAVYSCPFDGMITETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVADMALHYANKYNIMLV 297 (512)
T ss_pred cccCceEEEecccccccccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCCeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCHHHHHHHHHHhCCeecccCCCCCCCCCcccCCceEe--cccccCcccccc
Q psy16434 682 RLNSKFDLRRLCKAVNATALPRLVSTYIKMPSFCPAPPVQ--GRERDRPAQTCK 733 (745)
Q Consensus 682 r~v~k~dLeRIaraTGA~ivssld~l~~~~LG~c~~~~~~--~~e~~~~~~~~~ 733 (745)
+++++.||+|||++|||+++++++++.+++||+|++|++. |+++|.+-..|+
T Consensus 298 ~~~~~~dle~ia~~tGa~iis~l~~~~~~~LG~a~~v~~~~~g~~~~~~~~~~~ 351 (512)
T 3iyg_Q 298 RLNSKWDLRRLCKTVGATALPRLNPPVLEEMGHCDSVYLSEVGDTQVVVFKHEK 351 (512)
T ss_pred EeCCHHHHHHHHHHhCCEEecccccCCHHHCCcccEEEEEEeCCeEEEEEEccc
Confidence 9999999999999999999999999999999999999996 788886544443
No 46
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=99.96 E-value=5.1e-31 Score=303.83 Aligned_cols=272 Identities=19% Similarity=0.251 Sum_probs=229.6
Q ss_pred CCCCcccccccccEEEEEECC--eeEEEEEecccccceeEE-EEcCC-chhhHHHHHHHHHHHHHHHHHHHHHHH----H
Q psy16434 460 TPPAASELGYADSVAVDELGD--TAVVVFKLEAAESRIATL-VIRGA-TENYMDDIERAVDDGVNTFKGITKVFV----K 531 (745)
Q Consensus 460 ~~p~a~~LG~a~~vq~~eiGd--tsvti~~g~~l~~~a~TI-IlrG~-t~~IldE~eral~DAL~vlk~~~~~IP----r 531 (745)
+||.++++.++++.|++++|| |++++|+|+.+ ..+..+ +-+|. |..|.++++.+++.|+..++.....+. .
T Consensus 71 ~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~eLL-~~a~~l~l~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e 149 (590)
T 3p9d_C 71 AHPAAKSMLELSRTQDEEVGDGTTTVIILAGEIL-AQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQVSKPVDVENDA 149 (590)
T ss_dssp CCHHHHTHHHHTTTHHHHCSSCHHHHHHHHHHHH-HHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHCCTTTTCCTH
T ss_pred CCHHHHHHHHHHHhhhhhhCCCccchHHHHHHHH-hhhHHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCHH
Confidence 788999999999999999999 88999999988 778888 88897 889999999999999999987653111 1
Q ss_pred HHHhhcc--c------hhhHHHHHHHHHhhcC--C-c--------cceeeecCCCcceeecccccccccccchhhHhhhh
Q psy16434 532 TLAENTG--V------KSNEVISKLYSAHNEG--K-K--------TYGFDINGENSSVIDAAEAGILDLYLTKMWALKYA 592 (745)
Q Consensus 532 ~LaeNAG--l------d~~~vlsKL~~~h~~g--~-~--------~~GIDl~~~~ikI~dm~g~gI~Ds~lVkG~vL~~A 592 (745)
.|..-|. + ...+.+.++....-.. . . .+.+|+.. +++|.+++|+++.|+.+++|++|++.
T Consensus 150 ~L~~vA~tslsSK~~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~-~I~I~ki~Ggs~~ds~lv~Gmvfdk~ 228 (590)
T 3p9d_C 150 AMKKLIQASIGTKYVIHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKR-YVRVEKIPGGDVLDSRVLKGVLLNKD 228 (590)
T ss_dssp HHHHHHTTTSTTSTTGGGHHHHHHHHHHHHTTSTTCC-----------CCCSS-SSCEEEESSCCGGGCBCCSSEEECCC
T ss_pred HHHHHHHHHHhcccccccHHHHHHHHHHHHHHhcccccCccccccccccchhh-ceEEEEecCCCcccceeeeEEEEecc
Confidence 2222111 1 1234455554322110 0 0 11233332 35899999999999999999999999
Q ss_pred hhcchhhcccccceeeeeccCcccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCcccHHHHHH
Q psy16434 593 TSAANTILQQTKAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAKFGDMALHY 672 (745)
Q Consensus 593 ~e~a~mil~IDn~kIlll~~~Le~~k~e~~~~v~i~s~~el~~~~~~E~~~i~~~V~~I~~~gvnVVl~~~~I~d~al~~ 672 (745)
+.+..|+++++||+|++++||||++|+++++++.+++++++++++++|+++++++|++|++.||+|||++++|+|+|+||
T Consensus 229 ~~~~~m~~~~en~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~~g~~vII~e~~I~d~Al~~ 308 (590)
T 3p9d_C 229 VVHPKMSRHIENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTLVITEKGVSDLAQHY 308 (590)
T ss_dssp CSCTTSCSCEESCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHHHHTTCCSEECCSSCCCTHHHHH
T ss_pred cCCCCCcceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCcCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCeEEEeCCHHHHHHHHHHhCCeecccCCCCCCCCCcc-cCCceEe--cccccCcccccc
Q psy16434 673 LNKYGLMGVRLNSKFDLRRLCKAVNATALPRLVSTYIKMPSF-CPAPPVQ--GRERDRPAQTCK 733 (745)
Q Consensus 673 L~k~gIl~ir~v~k~dLeRIaraTGA~ivssld~l~~~~LG~-c~~~~~~--~~e~~~~~~~~~ 733 (745)
|.++||++++++++++|+|||++|||+++++++++..++||+ |++|++. |.|+|++.+.|.
T Consensus 309 L~k~~I~av~~~~k~~le~ia~~TGa~iis~l~~~~~~~LG~~a~~v~~~~ig~d~~~~i~g~~ 372 (590)
T 3p9d_C 309 LLKGGCSVLRRVKKSDNNRIARVTGATIVNRVEDLKESDVGTNCGLFKVEMIGDEYFSFLDNCK 372 (590)
T ss_dssp HHHTTCCCCCCCCHHHHHHHHHHHTCCCCSCSTTCCTTSCBCCCSEEECCEETTEECEEECC--
T ss_pred HHhccceeeccCCHHHHHHHHHHhCCceeecccCCCHHHhCCcCCEEEEEEEcCcEEEEEeCCC
Confidence 999999999999999999999999999999999999999999 9999874 889998887774
No 47
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=99.96 E-value=2.2e-30 Score=295.92 Aligned_cols=287 Identities=16% Similarity=0.163 Sum_probs=233.4
Q ss_pred EEEeccCCCccccccCCCCCcccccccccEEEEEECC--eeEEEEEecccccceeEEEEcCC-chhhHHHHHHHHHHHHH
Q psy16434 444 IAVYTCPVDIATTETKTPPAASELGYADSVAVDELGD--TAVVVFKLEAAESRIATLVIRGA-TENYMDDIERAVDDGVN 520 (745)
Q Consensus 444 Ilil~~~Le~~k~e~k~~p~a~~LG~a~~vq~~eiGd--tsvti~~g~~l~~~a~TIIlrG~-t~~IldE~eral~DAL~ 520 (745)
+.++|..-...+.-.-+||.++++.++++.|++++|| |++++|+|+.+ ..+..++-+|. |..+.++++.+++.|++
T Consensus 55 ~~iTnDG~tIlk~i~v~hP~akll~e~a~~qd~e~GDGTTtvvVLA~~Ll-~~a~~li~~GihP~~I~~G~~~A~~~a~~ 133 (528)
T 3p9d_D 55 IIISNDGHTILKQMAILHPVARMLVEVSAAQDSEAGDGTTSVVILTGALL-GAAERLLNKGIHPTIIADSFQSAAKRSVD 133 (528)
T ss_dssp EEEECCHHHHHHHSCCCCTTHHHHHHHHHHHHHHTCSCSHHHHHHHHHHH-HHHHHHHTTTCCHHHHHHHHHHHHHHHHH
T ss_pred eEEECCHHHHHHHcccCCHHHHHHHHHHHHhhhhhCCChhhHHHHHHHHH-HHHHHHHHCCCChHHHHHHHHHHHHHHHH
Confidence 4444433223332223789999999999999999999 88999999988 77777788887 88999999999999999
Q ss_pred HHHHHHHHH-------HHHHHhhcc---c--hhhHHHHHHHHHhhc--CCc-cceeeecCCCcceeecccccccccccch
Q psy16434 521 TFKGITKVF-------VKTLAENTG---V--KSNEVISKLYSAHNE--GKK-TYGFDINGENSSVIDAAEAGILDLYLTK 585 (745)
Q Consensus 521 vlk~~~~~I-------Pr~LaeNAG---l--d~~~vlsKL~~~h~~--g~~-~~GIDl~~~~ikI~dm~g~gI~Ds~lVk 585 (745)
.++.....+ -..++..+- . ...+.+.++....-. +.. .=-+|+.. +++.+++|+++.|+.+++
T Consensus 134 ~L~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~i~v~~--I~I~k~~Gg~~~ds~lv~ 211 (528)
T 3p9d_D 134 ILLEMCHKVSLSDREQLVRAASTSLSSKIVSQYSSFLAPLAVDSVLKISDENSKNVDLND--IRLVKKVGGTIDDTEMID 211 (528)
T ss_dssp HHHTTCCCCCSCCHHHHHHHHHHHSCSSSCSTTHHHHHHHHHHHHHTTCCTTTTCCCGGG--SBCCCCCSSCSCCCEEES
T ss_pred HHHHhhCCCCCCCHHHHHHHHHHHhcCCccchhHHHHHHHHHHHHHHhccccCCccceEE--EEEEEecCCCccceEEEe
Confidence 998654211 011222110 0 012344444322110 100 00244443 489999999999999999
Q ss_pred hhHhhhhhhcch-hhcccccceeeeeccCcccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCc
Q psy16434 586 MWALKYATSAAN-TILQQTKAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAK 664 (745)
Q Consensus 586 G~vL~~A~e~a~-mil~IDn~kIlll~~~Le~~k~e~~~~v~i~s~~el~~~~~~E~~~i~~~V~~I~~~gvnVVl~~~~ 664 (745)
|++|++...+.. |+++++|++|++++++|+++++++++++.++++++++++.++|++++..++++|++.|++|||++++
T Consensus 212 G~v~dk~~~~~~~m~~~ien~kIll~~~~le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~ 291 (528)
T 3p9d_D 212 GVVLTQTAIKSAGGPTRKEKAKIGLIQFQISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKS 291 (528)
T ss_dssp SCBCCCCCCCSSSCCSEESSEEEEEECCCSSCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEEESSC
T ss_pred eeEEeecccCcccCcccccCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 999999998887 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred c-----cHHHHHHHHHcCCeEEEeCCHHHHHHHHHHhCCeecccCCCCCCCCCcccCCceEe--cccccCcccccc
Q psy16434 665 F-----GDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNATALPRLVSTYIKMPSFCPAPPVQ--GRERDRPAQTCK 733 (745)
Q Consensus 665 I-----~d~al~~L~k~gIl~ir~v~k~dLeRIaraTGA~ivssld~l~~~~LG~c~~~~~~--~~e~~~~~~~~~ 733 (745)
| +++|+|||.++||++++++++++|+|||++|||+++++++++.+++||+|+.|++. +.++|.+-+.|.
T Consensus 292 I~~~a~~~~al~~L~~~~I~av~~~~k~~le~ia~~tGa~ii~~~~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~ 367 (528)
T 3p9d_D 292 ILRDAVNDLALHFLSKLNIMVVKDIEREEIEFLSKGLGCKPIADIELFTEDRLDSADLVEEIDSDGSKIVRVTGIR 367 (528)
T ss_dssp SCTTSCSCHHHHHHTTTSCCEEECCCTHHHHHHHHHHTCCCCSCSTTCCSSSEEEESCEECCEETTEECCBCTTBC
T ss_pred cccccCCHHHHHHHHHcCcEEEEeCCHHHHHHHHHHHCCEEecccccCCHHHCCcccEEEEEEECCEEEEEEEccc
Confidence 9 99999999999999999999999999999999999999999999999999999985 788887666554
No 48
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=99.95 E-value=2e-31 Score=306.44 Aligned_cols=270 Identities=19% Similarity=0.244 Sum_probs=227.5
Q ss_pred CCCCcccccccccEEEEEECC--eeEEEEEecccccceeEEEEcCC-chhhHHHHHHHHHHHHHHHHH-HHHHH------
Q psy16434 460 TPPAASELGYADSVAVDELGD--TAVVVFKLEAAESRIATLVIRGA-TENYMDDIERAVDDGVNTFKG-ITKVF------ 529 (745)
Q Consensus 460 ~~p~a~~LG~a~~vq~~eiGd--tsvti~~g~~l~~~a~TIIlrG~-t~~IldE~eral~DAL~vlk~-~~~~I------ 529 (745)
+||.++++.++++.|++++|| |++++|+++.+ ..+..++-+|. |..|.++++.+++.|++.++. ....+
T Consensus 76 ~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~~LL-~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e 154 (559)
T 3p9d_A 76 QHPAGKILVELAQQQDREIGDGTTSVVIIASELL-KRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTSVDTLGKE 154 (559)
T ss_dssp CSHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH-HHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHTGGGSCC--CT
T ss_pred CCHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHH-HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHH
Confidence 789999999999999999999 89999999988 77777888887 889999999999999999998 43211
Q ss_pred -HHHHHhhcc---c--hhhHHHHHHHHHhhc--CC---c-cceeeecCCCcceeecccccccccccchhhHhhhhhhcch
Q psy16434 530 -VKTLAENTG---V--KSNEVISKLYSAHNE--GK---K-TYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAAN 597 (745)
Q Consensus 530 -Pr~LaeNAG---l--d~~~vlsKL~~~h~~--g~---~-~~GIDl~~~~ikI~dm~g~gI~Ds~lVkG~vL~~A~e~a~ 597 (745)
-..++..+- + ...+.+.+|....-. +. . .--+|+.. ++|.++.|+++.|+.+++|++|++...+..
T Consensus 155 ~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~~i~l~~--I~I~k~~Ggs~~ds~lv~G~v~dk~~~~~~ 232 (559)
T 3p9d_A 155 TLINIAKTSMSSKIIGADSDFFSNMVVDALLAVKTQNSKGEIKYPVKA--VNVLKAHGKSATESLLVPGYALNCTVASQA 232 (559)
T ss_dssp THHHHHHHTTSSSGGGTTHHHHHHHHHHHHHHHCCEESSSCEECCTTC--CCEEEEESSCSSCCBCCSEECCCCCCSSTT
T ss_pred HHHHHHHHHhccCcccchhHHHHHHHHHHHHHhcccccCCCCccchhH--eEEEEecCCCccceeEeccEEEeecccCCC
Confidence 012222110 0 012334343221100 10 0 01244443 599999999999999999999999999999
Q ss_pred hhcccc--cceeeeeccCcccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCcccHHHHHHHHH
Q psy16434 598 TILQQT--KAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAKFGDMALHYLNK 675 (745)
Q Consensus 598 mil~ID--n~kIlll~~~Le~~k~e~~~~v~i~s~~el~~~~~~E~~~i~~~V~~I~~~gvnVVl~~~~I~d~al~~L~k 675 (745)
|+.+++ +++|++++++|+++++++++++.++++++++++.++|++++..++++|+++|++|||++++|+++|+|||.+
T Consensus 233 m~~~ie~~n~kIll~~~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~g~~lvI~~~~I~~~al~~L~~ 312 (559)
T 3p9d_A 233 MPKRIAGGNVKIACLDLNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVE 312 (559)
T ss_dssp SCSEECSSSBCEEEETTCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCCCGGGTHHHHH
T ss_pred cceeeccCCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCEEEEcCCCCHHHHHHHHH
Confidence 999999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEeCCHHHHHHHHHHhCCeecccC------CCCCCCCCcccCCceEe--cccccCccccc
Q psy16434 676 YGLMGVRLNSKFDLRRLCKAVNATALPRL------VSTYIKMPSFCPAPPVQ--GRERDRPAQTC 732 (745)
Q Consensus 676 ~gIl~ir~v~k~dLeRIaraTGA~ivssl------d~l~~~~LG~c~~~~~~--~~e~~~~~~~~ 732 (745)
+||++++++++++|+|||++|||++++++ +++.+++||+|+.|++. ++++|.+.+.|
T Consensus 313 ~~I~av~~~~k~~le~ia~~TGa~iis~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~ 377 (559)
T 3p9d_A 313 AKIMGVRRCKKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDEVVQAKFSDDECILIKGT 377 (559)
T ss_dssp TTCEEESSCCHHHHHHHHHHSSCCCBCCSCCSTTCCCCCTTTSCCEEEEEEEECSSCEEECEEEE
T ss_pred cCCceEccCCHHHHHHHHHHhCCEEEeccccccccccCCHhHCccceEEEEEEEcCceEEEEEcC
Confidence 99999999999999999999999999999 78899999999999985 88888776655
No 49
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=99.95 E-value=1e-31 Score=308.86 Aligned_cols=286 Identities=20% Similarity=0.226 Sum_probs=228.4
Q ss_pred EEEeccCCCccccccCCCCCcccccccccEEEEEECC--eeEEEEEecccccceeEEEEcCC-chhhHHHHHHHHHHHHH
Q psy16434 444 IAVYTCPVDIATTETKTPPAASELGYADSVAVDELGD--TAVVVFKLEAAESRIATLVIRGA-TENYMDDIERAVDDGVN 520 (745)
Q Consensus 444 Ilil~~~Le~~k~e~k~~p~a~~LG~a~~vq~~eiGd--tsvti~~g~~l~~~a~TIIlrG~-t~~IldE~eral~DAL~ 520 (745)
+.++|..-...+.-.-+||.++++.++++.|++++|| |++++|+|+.+ ..+..++-+|. |..|.++++.+++.|++
T Consensus 81 ~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~~LL-~~a~~li~~GihP~~I~~G~~~A~~~a~~ 159 (562)
T 3p9d_E 81 ITITNDGATILSQMELDNEIAKLLVQLSKSQDDEIGDGTTGVVVLASALL-DQALELIQKGIHPIKIANGFDEAAKLAIS 159 (562)
T ss_dssp EEEESCHHHHHHHSCCCSHHHHHHHHHHHHHHHHTSSCTTHHHHHHHHHH-HHHHHHHTTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEECCHHHHHHHccCCCHHHHHHHHHHHHHHhhcCCCcccHHHHHHHHH-HHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Confidence 4444433223332223789999999999999999999 88999999988 77777888897 88999999999999999
Q ss_pred HHHHHHHHHH--------HHHHhhc------cc--hhhHHHHHHHHHhh---cCCccceeeecCCCcceeeccccccccc
Q psy16434 521 TFKGITKVFV--------KTLAENT------GV--KSNEVISKLYSAHN---EGKKTYGFDINGENSSVIDAAEAGILDL 581 (745)
Q Consensus 521 vlk~~~~~IP--------r~LaeNA------Gl--d~~~vlsKL~~~h~---~g~~~~GIDl~~~~ikI~dm~g~gI~Ds 581 (745)
.|+.....+. ..|+.-| -. ...+.++++....- .....-.+|+. .++|.++.|+++.|+
T Consensus 160 ~L~~~s~~v~~~~~~~~~e~L~~vA~tSl~sK~i~~~~d~la~l~vdAV~~V~~~~~~~~d~~--~I~I~k~~Ggs~~ds 237 (562)
T 3p9d_E 160 KLEETCDDISASNDELFRDFLLRAAKTSLGSKIVSKDHDRFAEMAVEAVINVMDKDRKDVDFD--LIKMQGRVGGSISDS 237 (562)
T ss_dssp HTTTTTSSSSBCCCSSCHHHHHHHHHHHHSSSTTTTTHHHHHHHHHHHHHTSSTTTCSCCCCC--CCEEEEESSSCGGGC
T ss_pred HHHHhccCcCCCcchhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHheeecccccCCCCcc--cEEEEEecCCChhhh
Confidence 9876432110 1122111 00 01233333322110 00000123443 359999999999999
Q ss_pred ccchhhHhhhhhhcchhhccc------ccceeeeeccCcccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcC
Q psy16434 582 YLTKMWALKYATSAANTILQQ------TKAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTG 655 (745)
Q Consensus 582 ~lVkG~vL~~A~e~a~mil~I------Dn~kIlll~~~Le~~k~e~~~~v~i~s~~el~~~~~~E~~~i~~~V~~I~~~g 655 (745)
.+|+|++|++...+..|++++ .++++++++|||++.++++++++.+++++++++|.++|+++++.++++|++.|
T Consensus 238 ~lveGmv~dk~~~sp~m~~~~~~~~~~~~~kIall~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g 317 (562)
T 3p9d_E 238 KLINGVILDKDFSHPQMPKCVLPKEGSDGVKLAILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAG 317 (562)
T ss_dssp EEESSEEESSCCCTTSCCC-----TTCSSCEECEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ceeeeEEEecCCCCCCcCcccccccccccceEEEecccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999 89999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEeCCcccHHHHHHHHHcCCeEEEeCCHHHHHHHHHHhCCeecccCCCCCCCCCcccCCceEe--c--ccccCcccc
Q psy16434 656 ANVVVAGAKFGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNATALPRLVSTYIKMPSFCPAPPVQ--G--RERDRPAQT 731 (745)
Q Consensus 656 vnVVl~~~~I~d~al~~L~k~gIl~ir~v~k~dLeRIaraTGA~ivssld~l~~~~LG~c~~~~~~--~--~e~~~~~~~ 731 (745)
++|||++++|+|+|+|||.++||++++++++++|+|||++|||+++++++++.+++||+|+.|+++ | +++|++...
T Consensus 318 ~~vvI~~~~I~~~Al~~L~~~~I~~v~~v~k~~le~ia~~TGa~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~i~g 397 (562)
T 3p9d_E 318 ADVVICQWGFDDEANHLLLQNDLPAVRWVGGQELEHIAISTNGRIVPRFQDLSKDKLGTCSRIYEQEFGTTKDRMLIIEQ 397 (562)
T ss_dssp CSCCEECSSCCSHHHHHHHTTTCCCEECCCTTTHHHHHHHHCCCEEESSSCCCTTSCEECSCEEEECCSSSSCCEEEECC
T ss_pred CcEEEEeCCCCHHHHHHHHHCCCEEEeccCHHHHHHHHHHhCCEEEeccccCCHHHCCcceEEEEEEeccCCceEEEEec
Confidence 999999999999999999999999999999999999999999999999999999999999999996 4 477765443
Q ss_pred c
Q psy16434 732 C 732 (745)
Q Consensus 732 ~ 732 (745)
|
T Consensus 398 ~ 398 (562)
T 3p9d_E 398 S 398 (562)
T ss_dssp C
T ss_pred C
Confidence 3
No 50
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=99.95 E-value=1.9e-30 Score=296.59 Aligned_cols=269 Identities=16% Similarity=0.168 Sum_probs=221.8
Q ss_pred CCCCcccccccccEEEEEECC--eeEEEEEecccccceeEEEEc-CC-chhhHHHHHHHHHHHHHHHHHHHHHH------
Q psy16434 460 TPPAASELGYADSVAVDELGD--TAVVVFKLEAAESRIATLVIR-GA-TENYMDDIERAVDDGVNTFKGITKVF------ 529 (745)
Q Consensus 460 ~~p~a~~LG~a~~vq~~eiGd--tsvti~~g~~l~~~a~TIIlr-G~-t~~IldE~eral~DAL~vlk~~~~~I------ 529 (745)
+||.++++.++++.|++++|| |++++|+++.+ ..+..++-. |. |..+.++++.+++.|++.++.....+
T Consensus 70 ~hP~Akll~e~a~~qd~~~GDGTTtavVLA~~Ll-~ea~~lv~~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~ 148 (527)
T 3p9d_B 70 DNPAAKVLVNISKVQDDEVGDGTTSVTVLSAELL-REAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVDNSHDKTM 148 (527)
T ss_dssp CCHHHHHHHHHHHHHHHHTCSCTTTTTHHHHHHH-HHHHHHTC---CCHHHHHHHHHHHHHHHHHHHHHTCBCCCCCHHH
T ss_pred CCHHHHHHHHHHHHhHhhhCCcHhHHHHHHHHHH-HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhCccCCCcchh
Confidence 789999999999999999999 89999999988 777777778 87 88999999999999999998643200
Q ss_pred -HHHHHhhccc--h------hhHHHHHHHHHhhcCCccceeeecCCCcceeecccccccccccchhhHhhhhhhcchhhc
Q psy16434 530 -VKTLAENTGV--K------SNEVISKLYSAHNEGKKTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAANTIL 600 (745)
Q Consensus 530 -Pr~LaeNAGl--d------~~~vlsKL~~~h~~g~~~~GIDl~~~~ikI~dm~g~gI~Ds~lVkG~vL~~A~e~a~mil 600 (745)
...|++-|.. . ..+.+.+|....-. .+|-+.+.+.++|.++.|+.+.|+.+++|++|++...+.. ++
T Consensus 149 ~~~~l~~vA~tSl~sK~~~~~~~~i~~li~dAv~---~V~~~~~~~~I~V~k~~gg~~~ds~lv~G~~~dk~~~~~~-p~ 224 (527)
T 3p9d_B 149 FREDLIHIAKTTLSSKILSQDKDHFAELATNAIL---RLKGSTNLEHIQIIKILGGKLSDSFLDEGFILAKKFGNNQ-PK 224 (527)
T ss_dssp HHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHH---TTCTTCCTTSSCCCBCCCSSSSCCCEESSCCCSCCCSSSC-CS
T ss_pred hHHHHHHHHHhccccCcccchHHHHHHHHHHHHH---HhcccCCcceEEEEEcCCCCccccEEEEeEEEecccCCCC-Ce
Confidence 1222221100 0 02333333322111 1111111123588888999999999999999998887775 88
Q ss_pred ccccceeeeeccCccccccc-ccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCcccHHHHHHHHHcCCe
Q psy16434 601 QQTKAKIAVYTCPVDIATTE-TKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAKFGDMALHYLNKYGLM 679 (745)
Q Consensus 601 ~IDn~kIlll~~~Le~~k~e-~~~~v~i~s~~el~~~~~~E~~~i~~~V~~I~~~gvnVVl~~~~I~d~al~~L~k~gIl 679 (745)
+++|++|++++|+||+++++ +++++.++++++++++.++|++++++++++|++.|++||+++++|+++|+|||.++||+
T Consensus 225 ~~~n~kIlll~~~le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~~~~i~ 304 (527)
T 3p9d_B 225 RIENAKILIANTTLDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDLGIN 304 (527)
T ss_dssp CCSSCEEEEECSCSSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEEESSCCCTTTHHHHHHHTCBC
T ss_pred eeecceEEEeccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHCCCE
Confidence 99999999999999999999 69999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCHHHHHHHHHHhCCeecccCCCCCCCCCcccCCceEe--cccccCcccccc
Q psy16434 680 GVRLNSKFDLRRLCKAVNATALPRLVSTYIKMPSFCPAPPVQ--GRERDRPAQTCK 733 (745)
Q Consensus 680 ~ir~v~k~dLeRIaraTGA~ivssld~l~~~~LG~c~~~~~~--~~e~~~~~~~~~ 733 (745)
+++++++.||+|||++|||+++++++++.+++||+|+.|++. |.|+|.+-..|.
T Consensus 305 av~~~~~~dle~ia~~tGa~iv~~~~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~ 360 (527)
T 3p9d_B 305 SIEHADFEGVERLALVTGGEVVSTFDEPSKCKLGECDVIEEIMLGEQPFLKFSGCK 360 (527)
T ss_dssp CCCCCHHHHHHHHHHHTCCCCCSTTSCCTTSCEECSBCCBCCCSSSCCBCCBCSSC
T ss_pred EEecCCHHHHHHHHHHhCCEEecchhhCCHHHCCCCcEEEEEEecceEEEEEECCC
Confidence 999999999999999999999999999999999999999985 888988766553
No 51
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=99.72 E-value=9.6e-20 Score=208.62 Aligned_cols=240 Identities=17% Similarity=0.145 Sum_probs=184.8
Q ss_pred CCC----CcccccccccEEEEEECC--eeEEEEEecccccceeEEEEcCC-chhhHHHHHHHHHHHHHHHHHHHHHH--H
Q psy16434 460 TPP----AASELGYADSVAVDELGD--TAVVVFKLEAAESRIATLVIRGA-TENYMDDIERAVDDGVNTFKGITKVF--V 530 (745)
Q Consensus 460 ~~p----~a~~LG~a~~vq~~eiGd--tsvti~~g~~l~~~a~TIIlrG~-t~~IldE~eral~DAL~vlk~~~~~I--P 530 (745)
+|| .++++-++++.|++++|| |++++|+++.+ ..+..++-+|. |..|.++++.+++.|++.++.....+ .
T Consensus 62 ~hp~en~~Akll~e~a~~qd~e~GDGTTtvvVLA~~LL-~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~ 140 (543)
T 1we3_A 62 EDHLENIGAQLLKEVASKTNDVAGDGTTTATVLAQAIV-REGLKNVAAGANPLALKRGIEKAVEAAVEKIKALAIPVEDR 140 (543)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHH-HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSH
T ss_pred CChHHhHHHHHHHHHHHhhheecCCCcchHHHHHHHHH-HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCH
Confidence 778 999999999999999999 89999999988 77777888887 88999999999999999998765311 1
Q ss_pred HHHHhhccchh-hHHHHHHHHHhhcCCccceeeecCCCcceeeccccccccc-ccchhhHhhhhhhcch-------hhcc
Q psy16434 531 KTLAENTGVKS-NEVISKLYSAHNEGKKTYGFDINGENSSVIDAAEAGILDL-YLTKMWALKYATSAAN-------TILQ 601 (745)
Q Consensus 531 r~LaeNAGld~-~~vlsKL~~~h~~g~~~~GIDl~~~~ikI~dm~g~gI~Ds-~lVkG~vL~~A~e~a~-------mil~ 601 (745)
..|.+-|.... .+.+.++....-. .+|-| +.+.+. .++++.|+ .+++|++|++...+.. |...
T Consensus 141 ~~l~~vA~iS~~~~~i~~li~dAv~---~V~~~---g~I~Ve--~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~~ 212 (543)
T 1we3_A 141 KAIEEVATISANDPEVGKLIADAME---KVGKE---GIITVE--ESKSLETELKFVEGYQFDKGYISPYFVTNPETMEAV 212 (543)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHH---TTCTT---SEEEEE--ECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBCC
T ss_pred HHHHHhhhhhcCCHHHHHHHHHHHH---HhCcC---CcEEEe--cCCccccceEEEcCEEEecCccccccccCcccCcee
Confidence 12221111100 2334444322111 11111 212443 67888998 9999999998877664 6667
Q ss_pred cccceeeeeccCcccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCcccHHHHHHHHH------
Q psy16434 602 QTKAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAKFGDMALHYLNK------ 675 (745)
Q Consensus 602 IDn~kIlll~~~Le~~k~e~~~~v~i~s~~el~~~~~~E~~~i~~~V~~I~~~gvnVVl~~~~I~d~al~~L~k------ 675 (745)
++||+|+++++++ ++++++ ..++++|++.|++|||++++|+++|++||.+
T Consensus 213 ~en~~Ill~d~~I-------------s~~~~l-----------~~~le~i~~~g~~lvii~~~I~~~Al~~L~~n~irg~ 268 (543)
T 1we3_A 213 LEDAFILIVEKKV-------------SNVREL-----------LPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGT 268 (543)
T ss_dssp EEEEEEEEESSCB-------------CCHHHH-----------HHHHHHHHTTTCCEEEEESCBCHHHHHHHHHHHHHTS
T ss_pred ecCceEEEECCCc-------------CCHHHH-----------HHHHHHHHhcCCCEEEEcCCccHHHHHHHHHhccccc
Confidence 9999999999964 455554 3568889999999999999999999999998
Q ss_pred cCCeEEE-----eCCHHHHHHHHHHhCCeeccc-----CCCCCCCCCcccCCceEecccccCcccccc
Q psy16434 676 YGLMGVR-----LNSKFDLRRLCKAVNATALPR-----LVSTYIKMPSFCPAPPVQGRERDRPAQTCK 733 (745)
Q Consensus 676 ~gIl~ir-----~v~k~dLeRIaraTGA~ivss-----ld~l~~~~LG~c~~~~~~~~e~~~~~~~~~ 733 (745)
.+|++++ ++++.+|+|||++|||+++++ ++++..++||+|+.|++ +++++++...|.
T Consensus 269 ~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~a~~v~~-~~~~~~~i~g~~ 335 (543)
T 1we3_A 269 LSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRI-TKDETTIVGGKG 335 (543)
T ss_dssp CCEEEEECSSSHHHHHHHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEEEEEEEE-CSSCEEEEEECC
T ss_pred eeEEEEeccchhhhhHHHHHHHHHHhCCceeeccccCCcccCCHHHCCCceEEEE-EcCEEEEEcCCC
Confidence 5678888 889999999999999999996 89999999999999987 467777766654
No 52
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=99.71 E-value=4.1e-19 Score=203.05 Aligned_cols=239 Identities=15% Similarity=0.124 Sum_probs=173.9
Q ss_pred CCCC----cccccccccEEEEEECC--eeEEEEEecccccceeEEEEcCC-chhhHHHHHHHHHHHHHHHHHHHHHH--H
Q psy16434 460 TPPA----ASELGYADSVAVDELGD--TAVVVFKLEAAESRIATLVIRGA-TENYMDDIERAVDDGVNTFKGITKVF--V 530 (745)
Q Consensus 460 ~~p~----a~~LG~a~~vq~~eiGd--tsvti~~g~~l~~~a~TIIlrG~-t~~IldE~eral~DAL~vlk~~~~~I--P 530 (745)
+||. ++++.++++.|++++|| |++++|+++.+ ..+..++-.|. |..|.++++++++.|++.|+.....+ +
T Consensus 62 ~hp~~n~gAkll~e~a~~qd~e~GDGTTtvvVLAgeLL-~ea~~li~~GihP~~I~~G~~~A~~~a~e~L~~~s~~v~~~ 140 (546)
T 3rtk_A 62 EDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALV-REGLRNVAAGANPLGLKRGIEKAVEKVTETLLKGAKEVETK 140 (546)
T ss_dssp CCHHHHHHHHHHHHHHTSCC-------CHHHHHHHHHH-HHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSH
T ss_pred CChhhhHHHHHHHHHHHhhhhhhCCCcchHHHHHHHHH-HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCh
Confidence 6776 78999999999999999 88999999988 77777888888 88999999999999999998754311 1
Q ss_pred H---HHHhhccchhhHHHHHHHHHhhcCCccceeeecCCCcceeecccccccccccchhhHhhhhhhcc-------hhhc
Q psy16434 531 K---TLAENTGVKSNEVISKLYSAHNEGKKTYGFDINGENSSVIDAAEAGILDLYLTKMWALKYATSAA-------NTIL 600 (745)
Q Consensus 531 r---~LaeNAGld~~~vlsKL~~~h~~g~~~~GIDl~~~~ikI~dm~g~gI~Ds~lVkG~vL~~A~e~a-------~mil 600 (745)
. .++..+. . .+.+.++....- ..+|-| +.+++.+. .+...|+.+++|++|++...+. .|+.
T Consensus 141 e~L~~vA~iS~-~-~~~i~~liadAv---~~V~~d---gvI~Ve~~-~~~~~ds~lveGm~fdkg~~sp~~vt~~e~m~~ 211 (546)
T 3rtk_A 141 EQIAATAAISA-G-DQSIGDLIAEAM---DKVGNE---GVITVEES-NTFGLQLELTEGMRFDKGYISGYFVTDPERQEA 211 (546)
T ss_dssp HHHHHHHHHHH-T-CHHHHHHHHHHH---HHSCTT---SEEEEECC-SSSSCEEEEECEEEESCCBSSGGGCSBTTTTBE
T ss_pred HHHHhHeEEeC-C-chHHHHHHHHHH---HHhccC---CceEEEec-CCcccceEEeeeEEEcCCccCcccccCcccCee
Confidence 1 1221111 0 233344432211 011111 11244432 2445799999999999887765 6788
Q ss_pred ccccceeeeeccCcccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCcccHHHHHHHHHcC---
Q psy16434 601 QQTKAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAKFGDMALHYLNKYG--- 677 (745)
Q Consensus 601 ~IDn~kIlll~~~Le~~k~e~~~~v~i~s~~el~~~~~~E~~~i~~~V~~I~~~gvnVVl~~~~I~d~al~~L~k~g--- 677 (745)
+++||+|++++++ +++++++. .++++|++.|++|||++++|+++|++||..++
T Consensus 212 ~len~kIll~d~k-------------Is~~~~l~-----------~~le~I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg 267 (546)
T 3rtk_A 212 VLEDPYILLVSSK-------------VSTVKDLL-----------PLLEKVIGAGKPLLIIAEDVEGEALSTLVVNKIRG 267 (546)
T ss_dssp EEESCEEEEBSSE-------------ECCSTTTH-----------HHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHHS
T ss_pred EecccEEEEECCc-------------cCCHHHHH-----------HHHHHHHhcCCCEEEEcCCCCHHHHHHHHHhCCCC
Confidence 9999999999985 34555543 45889999999999999999999999999754
Q ss_pred ---CeEEEe-----CCHHHHHHHHHHhCCeecc-----cCCCCCCCCCcccCCceEecccccCcccccc
Q psy16434 678 ---LMGVRL-----NSKFDLRRLCKAVNATALP-----RLVSTYIKMPSFCPAPPVQGRERDRPAQTCK 733 (745)
Q Consensus 678 ---Il~ir~-----v~k~dLeRIaraTGA~ivs-----sld~l~~~~LG~c~~~~~~~~e~~~~~~~~~ 733 (745)
+++++. ..+++|+|||++|||++++ +++++..+.||+|++|++ +++++++.+.|.
T Consensus 268 ~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~i-~~d~~~~i~g~~ 335 (546)
T 3rtk_A 268 TFKSVAVKAPGFGDRRKAMLQDMAILTGGQVISEEVGLTLENADLSLLGKARKVVV-TKDETTIVEGAG 335 (546)
T ss_dssp SCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCSSSSCCSTTCCTTTSEEEEEEEE-CSSCEEEEEECS
T ss_pred ceEEEEeccccccccchhhHHHHHHHhCCEEeeccccCccccCCHhhCCeeEEEEE-cCCeEEEEcCCC
Confidence 455543 3488999999999999999 699999999999999986 777887766654
No 53
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=99.70 E-value=1.3e-19 Score=207.54 Aligned_cols=239 Identities=13% Similarity=0.112 Sum_probs=156.8
Q ss_pred CCC----CcccccccccEEEEEECC--eeEEEEEecccccceeEEEEcCC-chhhHHHHHHHHHHHHHHHHHHHHHHH--
Q psy16434 460 TPP----AASELGYADSVAVDELGD--TAVVVFKLEAAESRIATLVIRGA-TENYMDDIERAVDDGVNTFKGITKVFV-- 530 (745)
Q Consensus 460 ~~p----~a~~LG~a~~vq~~eiGd--tsvti~~g~~l~~~a~TIIlrG~-t~~IldE~eral~DAL~vlk~~~~~IP-- 530 (745)
+|| .++++-++++.|++++|| |++++|+++.+ ..+..++-+|. |..|.++++.+++.|++.|+.....+.
T Consensus 63 ~hp~en~~Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll-~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~ 141 (545)
T 1iok_A 63 SDKFENMGAQMVREVASRTNDEAGDGTTTATVLAQAIV-REGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVNDS 141 (545)
T ss_dssp SSHHHHHHHHHHHHHHHHGGGGCSTHHHHHHHHHHHHH-HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCBCCCST
T ss_pred CChhhHHHHHHHHHHHHhhccccCCCcchHHHHHHHHH-HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCH
Confidence 678 999999999999999999 89999999988 77777888887 889999999999999999987553110
Q ss_pred ---HHHHhhccchhhHHHHHHHHHhhcCCccceeeecCCCcceeeccccccccc-ccchhhHhhhhhhcch-------hh
Q psy16434 531 ---KTLAENTGVKSNEVISKLYSAHNEGKKTYGFDINGENSSVIDAAEAGILDL-YLTKMWALKYATSAAN-------TI 599 (745)
Q Consensus 531 ---r~LaeNAGld~~~vlsKL~~~h~~g~~~~GIDl~~~~ikI~dm~g~gI~Ds-~lVkG~vL~~A~e~a~-------mi 599 (745)
..++..+ ....+.+.++....- ..+|-| +.+++. .++++.|+ .+++|++|++...+.. |+
T Consensus 142 e~l~~va~iS-~~~~~~i~~li~dAv---~~V~~~---g~I~Ve--~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~ 212 (545)
T 1iok_A 142 SEVAQVGTIS-ANGESFIGQQIAEAM---QRVGNE---GVITVE--ENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMI 212 (545)
T ss_dssp TTTTHHHHHT-TTTCHHHHHHHHHHH---HHHCTT---SCCCCE--ECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSC
T ss_pred HHHHHHHHhh-cCCchhHHHHHHHHH---HHhccC---CeEEEE--eCCccccceEEEecEEEecCccccccccCcccCc
Confidence 1112111 111223333322110 011111 223444 67889999 9999999998877654 66
Q ss_pred cccccceeeeeccCcccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCcccHHHHHHHHHc---
Q psy16434 600 LQQTKAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAKFGDMALHYLNKY--- 676 (745)
Q Consensus 600 l~IDn~kIlll~~~Le~~k~e~~~~v~i~s~~el~~~~~~E~~~i~~~V~~I~~~gvnVVl~~~~I~d~al~~L~k~--- 676 (745)
..++||+|++++++++ +++++ ..++++|++.|++|||++++|+++|+|||.++
T Consensus 213 ~~~en~~Ill~d~~I~-------------~~~~l-----------~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~ir 268 (545)
T 1iok_A 213 AELEDAYILLHEKKLS-------------SLQPM-----------VPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLR 268 (545)
T ss_dssp EEEEEEEEEECSSCBC-------------CCCC----------------------CCCCEEEESCBC-------------
T ss_pred eeecCCeEEEEcCCcC-------------CHHHH-----------HHHHHHHHhcCCCEEEECCCcCHHHHHHHHHcccc
Confidence 6799999999999864 23332 35688899999999999999999999999995
Q ss_pred ---CCeEEE-----eCCHHHHHHHHHHhCCeeccc-----CCCCCCCCCcccCCceEecccccCcccccc
Q psy16434 677 ---GLMGVR-----LNSKFDLRRLCKAVNATALPR-----LVSTYIKMPSFCPAPPVQGRERDRPAQTCK 733 (745)
Q Consensus 677 ---gIl~ir-----~v~k~dLeRIaraTGA~ivss-----ld~l~~~~LG~c~~~~~~~~e~~~~~~~~~ 733 (745)
+|++++ ++++.+|+|||++|||+++++ ++++.+++||+|+.|++ ++|+|++...|.
T Consensus 269 g~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~a~~v~~-~~~~~~~i~g~~ 337 (545)
T 1iok_A 269 GGLKIAAVKAPGFGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAKKVSI-NKDNTTIVDGAG 337 (545)
T ss_dssp ----CEEEECSCCTTHHHHHHHHHHHHHTC---------------CTTSEEEEEEEE-CSSCEEEESCCC
T ss_pred ccceeEEEecchhhhccHHHHHHHHHhcCCeeecccccCCcccCCHHHcCcCcEEEE-ecCEEEEEeCCC
Confidence 567887 999999999999999999997 99999999999999988 467887776664
No 54
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=99.70 E-value=4.1e-19 Score=203.39 Aligned_cols=240 Identities=16% Similarity=0.151 Sum_probs=184.1
Q ss_pred CCC----CcccccccccEEEEEECC--eeEEEEEecccccceeEEEEcCC-chhhHHHHHHHHHHHHHHHHHHHHHH--H
Q psy16434 460 TPP----AASELGYADSVAVDELGD--TAVVVFKLEAAESRIATLVIRGA-TENYMDDIERAVDDGVNTFKGITKVF--V 530 (745)
Q Consensus 460 ~~p----~a~~LG~a~~vq~~eiGd--tsvti~~g~~l~~~a~TIIlrG~-t~~IldE~eral~DAL~vlk~~~~~I--P 530 (745)
+|| .++++-++++.|++++|| |++++|+++.+ ..+..++-+|. |..+.++++.+++.|++.|+.....+ .
T Consensus 62 ~hp~en~~Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll-~ea~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~ 140 (547)
T 1kp8_A 62 EDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAII-TEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVPCSDS 140 (547)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHH-HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCBCCCSH
T ss_pred cChhhhHHHHHHHHHHHhhccccCCCcchhHHHHHHHH-HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCH
Confidence 678 999999999999999999 89999999988 77777888887 88999999999999999998765311 0
Q ss_pred HHHHhhcc--chhhHHHHHHHHHhhcCCccceeeecCCCcceeeccccccccc-ccchhhHhhhhhhcch-------hhc
Q psy16434 531 KTLAENTG--VKSNEVISKLYSAHNEGKKTYGFDINGENSSVIDAAEAGILDL-YLTKMWALKYATSAAN-------TIL 600 (745)
Q Consensus 531 r~LaeNAG--ld~~~vlsKL~~~h~~g~~~~GIDl~~~~ikI~dm~g~gI~Ds-~lVkG~vL~~A~e~a~-------mil 600 (745)
..|.+-|. ....+.+.++....- ..+|-| +.+++. .++++.|+ .+++|++|++...+.. |+.
T Consensus 141 e~l~~vA~iS~~~~~~i~~liadAv---~~V~~d---g~I~Ve--~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~ 212 (547)
T 1kp8_A 141 KAIAQVGTISANSDETVGKLIAEAM---DKVGKE---GVITVE--DGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAV 212 (547)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHHH---HHHCTT---SEEEEE--CCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBE
T ss_pred HHHHHHHHHhccchhHHHHHHHHHH---HHhCcC---CcEEEE--eCCccccccEEEecEEEecCccccccccCcccCce
Confidence 12221111 111233333322110 011111 212443 67889999 9999999998877653 677
Q ss_pred ccccceeeeeccCcccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCcccHHHHHHHHHc----
Q psy16434 601 QQTKAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAKFGDMALHYLNKY---- 676 (745)
Q Consensus 601 ~IDn~kIlll~~~Le~~k~e~~~~v~i~s~~el~~~~~~E~~~i~~~V~~I~~~gvnVVl~~~~I~d~al~~L~k~---- 676 (745)
.++||+|+++++++ ++++++ ..++++|++.|++|||++++|+++|+|||.++
T Consensus 213 ~lenp~Ill~d~~I-------------s~~~~l-----------~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg 268 (547)
T 1kp8_A 213 ELESPFILLADKKI-------------SNIREM-----------LPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRG 268 (547)
T ss_dssp EEESCEEECEESEE-------------CCGGGT-----------HHHHHHHHGGGCCEEEEESEECHHHHHHHHHHGGGT
T ss_pred EecCceEEEEcCcC-------------CCHHHH-----------HHHHHHHHhcCCCEEEECCCcCHHHHHHHHhccccc
Confidence 79999999999964 344443 35688899999999999999999999999995
Q ss_pred --CCeEEE-----eCCHHHHHHHHHHhCCeeccc-----CCCCCCCCCcccCCceEecccccCcccccc
Q psy16434 677 --GLMGVR-----LNSKFDLRRLCKAVNATALPR-----LVSTYIKMPSFCPAPPVQGRERDRPAQTCK 733 (745)
Q Consensus 677 --gIl~ir-----~v~k~dLeRIaraTGA~ivss-----ld~l~~~~LG~c~~~~~~~~e~~~~~~~~~ 733 (745)
+|++++ ++++.+|+|||++|||+++++ ++++..++||+|+.|++ ++++|++..-|.
T Consensus 269 ~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~a~~v~~-~~~~~~~i~g~~ 336 (547)
T 1kp8_A 269 IVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVI-NKDTTTIIDGVG 336 (547)
T ss_dssp SSCEEEEECSSCHHHHHHHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEEEEEEEE-CSSCEEEEEECC
T ss_pred ceeEEEEeccccccccHHHHHHHHHHhCCeEecccccCCcccCCHHHCCceeEEEE-ccceEEEEcCCC
Confidence 567888 899999999999999999996 99999999999999988 467777766654
No 55
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=99.31 E-value=3.7e-12 Score=126.04 Aligned_cols=89 Identities=15% Similarity=0.306 Sum_probs=74.3
Q ss_pred cccceeEeeEEEeecccC--CceeeeCceEEEeccCCCccccccC-----------------------------------
Q psy16434 417 LFNSEIVQGMVFKRSVEG--DITKQTKAKIAVYTCPVDIATTETK----------------------------------- 459 (745)
Q Consensus 417 ~~dS~lv~G~~l~~~~~~--~~~~i~nakIlil~~~Le~~k~e~k----------------------------------- 459 (745)
++||++++|++|++++.+ ||++++||||++++++||+++++.+
T Consensus 1 ~~dS~lv~Gvvl~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~n 80 (178)
T 1gml_A 1 MEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQLKPD 80 (178)
T ss_dssp --CCSEEEEEEESCCCSSTTSCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHHHHTTCCS
T ss_pred CCCcEEEEEEEEeccccCCCCCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHHHHhhcCCc
Confidence 368999999999999987 5999999999999999999987642
Q ss_pred -----------------------------------------------CCCCcccccc-cccEEEEEECCeeEEEEEeccc
Q psy16434 460 -----------------------------------------------TPPAASELGY-ADSVAVDELGDTAVVVFKLEAA 491 (745)
Q Consensus 460 -----------------------------------------------~~p~a~~LG~-a~~vq~~eiGdtsvti~~g~~l 491 (745)
++++++.||+ |+.+++.++|++++++|+||+.
T Consensus 81 VVl~~k~I~d~a~~~l~k~gI~~vr~v~~~dleria~atGa~iv~~~~~l~~~~LG~~~~~v~~~~ig~~~~~~~~gc~~ 160 (178)
T 1gml_A 81 VVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCKD 160 (178)
T ss_dssp EEEESSCBCHHHHHHHHHTTCEEECCCCHHHHHHHHHHHCCCEESCGGGCCGGGSBCCEEEEEEEEETTEEEEEEEEESS
T ss_pred EEEECCcccHHHHHHHHHCCCEEEecCCHHHHHHHHHHhCCeEeCChhhCChhhhCCcccEEEEEEECCeEEEEEECCCC
Confidence 7788899999 9999999999999999999987
Q ss_pred ccceeEEEEcCCchh
Q psy16434 492 ESRIATLVIRGATEN 506 (745)
Q Consensus 492 ~~~a~TIIlrG~t~~ 506 (745)
++++||++||++..
T Consensus 161 -~~~~TIllRG~~~~ 174 (178)
T 1gml_A 161 -PKACTILLRGASHH 174 (178)
T ss_dssp -TTSCEEEEEC----
T ss_pred -CCEEEEEEECCCcc
Confidence 89999999998643
No 56
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=98.59 E-value=3.3e-08 Score=95.97 Aligned_cols=69 Identities=23% Similarity=0.268 Sum_probs=62.5
Q ss_pred EeeEEEeecccC--CceeeeCceEEEeccCCCccccccC-----------------------------------------
Q psy16434 423 VQGMVFKRSVEG--DITKQTKAKIAVYTCPVDIATTETK----------------------------------------- 459 (745)
Q Consensus 423 v~G~~l~~~~~~--~~~~i~nakIlil~~~Le~~k~e~k----------------------------------------- 459 (745)
++|++|++++.+ ||++++||||++++++||+++++.+
T Consensus 1 i~Gvv~~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nVVl~~k 80 (159)
T 1ass_A 1 MSGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQK 80 (159)
T ss_dssp CCCEEESCCCSCTTSCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTCSEEEESS
T ss_pred CceEEEecccCCCCCCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCCeEEEECC
Confidence 579999999988 7999999999999999999887531
Q ss_pred -----------------------------------------CCCCcccccccccEEEEEECCeeEEEEEeccc
Q psy16434 460 -----------------------------------------TPPAASELGYADSVAVDELGDTAVVVFKLEAA 491 (745)
Q Consensus 460 -----------------------------------------~~p~a~~LG~a~~vq~~eiGdtsvti~~g~~l 491 (745)
++++++.||+|+.+++.++|++++++|+||+.
T Consensus 81 ~I~d~a~~~l~k~gI~~v~~v~~~dleria~atGa~iv~~~~~l~~~~LG~~~~v~e~~ig~~~~~~~~g~~~ 153 (159)
T 1ass_A 81 GIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKN 153 (159)
T ss_dssp CBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHTCCCBSSTTSCCTTSCEEEEEEEEEEETTEEEEEEESCC-
T ss_pred ccCHHHHHHHHHCCCEEEccCCHHHHHHHHHHhCCeeeCccccCCcccCccceEEEEEEECCeEEEEEECCCC
Confidence 78899999999999999999999999999975
No 57
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=95.82 E-value=0.0072 Score=59.81 Aligned_cols=37 Identities=14% Similarity=0.123 Sum_probs=30.2
Q ss_pred ceeEeeEEEeecccCC---------ceeeeCceEEEeccCCCcccc
Q psy16434 420 SEIVQGMVFKRSVEGD---------ITKQTKAKIAVYTCPVDIATT 456 (745)
Q Consensus 420 S~lv~G~~l~~~~~~~---------~~~i~nakIlil~~~Le~~k~ 456 (745)
.++++||.|++||.++ ...++||+||+++.+++..+.
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKIs~i~~ 47 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKISSLPD 47 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEECCHHH
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCccCCHHH
Confidence 4689999999999764 567999999999988775443
No 58
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=93.83 E-value=0.061 Score=53.41 Aligned_cols=32 Identities=16% Similarity=0.170 Sum_probs=26.3
Q ss_pred eeEEEeecccCC---------ceeeeCceEEEeccCCCccc
Q psy16434 424 QGMVFKRSVEGD---------ITKQTKAKIAVYTCPVDIAT 455 (745)
Q Consensus 424 ~G~~l~~~~~~~---------~~~i~nakIlil~~~Le~~k 455 (745)
+||.||++|.++ ...++||+||+++.+++..+
T Consensus 13 ~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs~i~ 53 (201)
T 3osx_A 13 EGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKISNIR 53 (201)
T ss_dssp CCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEECCHH
T ss_pred cccEecCccCChheeecccCCEEEecCCeEEEEcCccCCHH
Confidence 699999999774 55799999999998776444
No 59
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=92.85 E-value=0.036 Score=52.48 Aligned_cols=31 Identities=16% Similarity=0.086 Sum_probs=25.6
Q ss_pred eEEEeecccCC---------ceeeeCceEEEeccCCCccc
Q psy16434 425 GMVFKRSVEGD---------ITKQTKAKIAVYTCPVDIAT 455 (745)
Q Consensus 425 G~~l~~~~~~~---------~~~i~nakIlil~~~Le~~k 455 (745)
||.|+++|.++ ...++||+||+++.+++..+
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKIs~i~ 40 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVR 40 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEECCHH
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEecccccCHH
Confidence 89999999763 56789999999998877544
No 60
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=91.66 E-value=0.69 Score=45.74 Aligned_cols=102 Identities=18% Similarity=0.100 Sum_probs=75.9
Q ss_pred cchhhcccccceeeeeccCcccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCcccHHHHHHHH
Q psy16434 595 AANTILQQTKAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAKFGDMALHYLN 674 (745)
Q Consensus 595 ~a~mil~IDn~kIlll~~~Le~~k~e~~~~v~i~s~~el~~~~~~E~~~i~~~V~~I~~~gvnVVl~~~~I~d~al~~L~ 674 (745)
...|.-.++||.|++.+-. +++..++.++++ ++.+.|--+++.-..|+..|+.-|.
T Consensus 23 ~~~m~~~le~p~ILitdkK-------------Is~i~~ilP~LE-----------~~~~~~kpLlIIAedvegeaLatLv 78 (194)
T 3m6c_A 23 FDNQQAVLEDALILLHQDK-------------ISSLPDLLPLLE-----------KVAGTGKPLLIVAEDVEGEALATLV 78 (194)
T ss_dssp TTTTBEEEEEEEEEEBSSE-------------ECCHHHHHHHHH-----------HHHHHTCCEEEEESEECHHHHHHHH
T ss_pred cCCcEEEEecceEEEEcCc-------------cCCHHHHHHHHH-----------HHHHhCCCeEEEecccccchhhhhh
Confidence 4456677889999987644 467777777665 3445565577777799999998664
Q ss_pred H------cCCeEEEeCC-----HHHHHHHHHHhCCeecc-----cCCCCCCCCCcccCCceE
Q psy16434 675 K------YGLMGVRLNS-----KFDLRRLCKAVNATALP-----RLVSTYIKMPSFCPAPPV 720 (745)
Q Consensus 675 k------~gIl~ir~v~-----k~dLeRIaraTGA~ivs-----sld~l~~~~LG~c~~~~~ 720 (745)
- .++.|++-.. +.-|+-||-.|||++++ ++++...+.||+|+++.+
T Consensus 79 vNklrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~v 140 (194)
T 3m6c_A 79 VNAIRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARRVVV 140 (194)
T ss_dssp HHHHHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEE
T ss_pred hhhccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccEEEE
Confidence 3 3455666654 56789999999999987 445677789999999988
No 61
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=91.37 E-value=0.58 Score=44.26 Aligned_cols=103 Identities=15% Similarity=0.146 Sum_probs=77.0
Q ss_pred cchhhcccccceeeeeccCcccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCcccHHHHHHHH
Q psy16434 595 AANTILQQTKAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAKFGDMALHYLN 674 (745)
Q Consensus 595 ~a~mil~IDn~kIlll~~~Le~~k~e~~~~v~i~s~~el~~~~~~E~~~i~~~V~~I~~~gvnVVl~~~~I~d~al~~L~ 674 (745)
...|.-.++||.|++.+-. +++..++.++++ ++++.|--+++.-..|+..|+.-|.
T Consensus 17 ~e~m~~~le~p~ILitdkK-------------Is~i~~llP~LE-----------~v~~~~~pLlIIAedvegeaLatLv 72 (145)
T 1srv_A 17 PETMEAVLEDAFILIVEKK-------------VSNVRELLPILE-----------QVAQTGKPLLIIAEDVEGEALATLV 72 (145)
T ss_dssp TTTTBEEEEEEEEEEESSE-------------ECCHHHHHHHHH-----------HHHTTTCCEEEEESEECHHHHHHHH
T ss_pred ccccEEEeeccEEEEeccc-------------ccCHHHHHHHHH-----------HHHHHCCCEEEEecccchhhhhhhh
Confidence 4567777889999997644 567888887765 4566776677777899999998775
Q ss_pred H------cCCeEEEeC-----CHHHHHHHHHHhCCeecccC-----CCCCCCCCcccCCceEe
Q psy16434 675 K------YGLMGVRLN-----SKFDLRRLCKAVNATALPRL-----VSTYIKMPSFCPAPPVQ 721 (745)
Q Consensus 675 k------~gIl~ir~v-----~k~dLeRIaraTGA~ivssl-----d~l~~~~LG~c~~~~~~ 721 (745)
- .++.|++-. .+.-|+-||-.|||++++.- ++...+.||+|+++.+.
T Consensus 73 vNklrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vt 135 (145)
T 1srv_A 73 VNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRIT 135 (145)
T ss_dssp HHHHTTSCCEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEEEC
T ss_pred hhhhcccceEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEEEc
Confidence 4 344556655 36688999999999999653 34566789999999883
No 62
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=91.11 E-value=0.7 Score=45.88 Aligned_cols=102 Identities=15% Similarity=0.142 Sum_probs=76.4
Q ss_pred cchhhcccccceeeeeccCcccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCcccHHHHHHHH
Q psy16434 595 AANTILQQTKAKIAVYTCPVDIATTETKGTVLIKSADELMKFSRGEENQLEEQIKAIADTGANVVVAGAKFGDMALHYLN 674 (745)
Q Consensus 595 ~a~mil~IDn~kIlll~~~Le~~k~e~~~~v~i~s~~el~~~~~~E~~~i~~~V~~I~~~gvnVVl~~~~I~d~al~~L~ 674 (745)
...|.-.++||.|++.+-. ++++.++.++++ ++.+.|--+++.-..|+..|+.-|.
T Consensus 30 ~e~m~~~le~p~ILitdkK-------------Is~i~~ilP~LE-----------~v~~~~rpLlIIAEDvegEALatLv 85 (201)
T 3osx_A 30 PESGSVELENPYILLVDKK-------------ISNIRELLPVLE-----------GVAKASKPLVIIAEDVEGEALATLV 85 (201)
T ss_dssp TTTTBEEEESCEEEEEEEE-------------ECCHHHHHHHHH-----------HHHTSSCCEEEEEEEECHHHHHHHH
T ss_pred ccCCEEEecCCeEEEEcCc-------------cCCHHHHHHHHH-----------HHHHhCCCeEEEeccccchhhhHHH
Confidence 4456677889999997644 467777777655 4556676677777799999998664
Q ss_pred H------cCCeEEEeCC-----HHHHHHHHHHhCCeeccc-----CCCCCCCCCcccCCceE
Q psy16434 675 K------YGLMGVRLNS-----KFDLRRLCKAVNATALPR-----LVSTYIKMPSFCPAPPV 720 (745)
Q Consensus 675 k------~gIl~ir~v~-----k~dLeRIaraTGA~ivss-----ld~l~~~~LG~c~~~~~ 720 (745)
- ..+.|++-.. +.-|+-||-.|||++++. +++...+.||+|+++.+
T Consensus 86 vNklrg~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~v 147 (201)
T 3osx_A 86 VNNMRGIVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVVI 147 (201)
T ss_dssp HHHHHTSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEE
T ss_pred HhhccceEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEEE
Confidence 4 3455666665 556899999999998864 34567788999999988
No 63
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=90.77 E-value=0.075 Score=42.85 Aligned_cols=46 Identities=22% Similarity=0.572 Sum_probs=34.7
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCcccce
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNEYKFR 95 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (745)
+...+|+|.+|... |-....-.+|+..|+.+.| |.|..||..|..+
T Consensus 10 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~h~~~~~-----------~~C~~C~~~f~~~ 55 (72)
T 1x6e_A 10 SGEKPYGCVECGKA--FSRSSILVQHQRVHTGEKP-----------YKCLECGKAFSQN 55 (72)
T ss_dssp TTCCCEECSSSCCE--ESSHHHHHHHHHGGGCSCC-----------EECSSSCCEESSH
T ss_pred CCCCCccCCCCCCc--cCCHHHHHHHHHhcCCCCC-----------eECCCCCcccCCH
Confidence 45678999999764 4455556789999886654 8899999887643
No 64
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=90.60 E-value=0.078 Score=42.42 Aligned_cols=45 Identities=27% Similarity=0.424 Sum_probs=33.3
Q ss_pred ccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCcccce
Q psy16434 38 RNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNEYKFR 95 (745)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (745)
...+|+|.+|... |-....-.+|+..|+-+.| |.|+.||..|..+
T Consensus 6 ~~~~~~C~~C~k~--f~~~~~L~~H~~~H~~~~~-----------~~C~~C~~~f~~~ 50 (70)
T 1x5w_A 6 SGHPEKCSECSYS--CSSKAALRIHERIHCTDRP-----------FKCNYCSFDTKQP 50 (70)
T ss_dssp CCCSEECSSSSCE--ESSHHHHHHHHGGGCCSCS-----------EECSSSSCEESSH
T ss_pred CCCCeECCCCCcc--cCCHHHHHHHHHHcCCCCC-----------EeCCCCCCccCCH
Confidence 3578999999764 4445556789988876544 7899999887643
No 65
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=89.50 E-value=0.12 Score=38.15 Aligned_cols=40 Identities=20% Similarity=0.422 Sum_probs=30.7
Q ss_pred ccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccC
Q psy16434 38 RNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGN 90 (745)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (745)
...+|+|.+|... |.....-.+|+..|+-+.| |.|+.||+
T Consensus 9 ~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~k~-----------~~C~~C~k 48 (48)
T 2epr_A 9 TRKQVACEICGKI--FRDVYHLNRHKLSHSGEKP-----------YSSGPSSG 48 (48)
T ss_dssp CCCSEEETTTTEE--ESSHHHHHHHGGGSCSCCC-----------CCSCCCCC
T ss_pred CCcCeeCCCCCcc--cCCHHHHHHHHHhcCCCCC-----------ccCCCCCC
Confidence 4578999999653 6666667789988876654 78999985
No 66
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=89.00 E-value=0.074 Score=40.46 Aligned_cols=43 Identities=19% Similarity=0.426 Sum_probs=31.3
Q ss_pred cceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCcccc
Q psy16434 39 NQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNEYKF 94 (745)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (745)
..+|+|.+|+.. |.....-.+|+..|+.+.| |.|..||..|..
T Consensus 2 ~~~~~C~~C~~~--f~~~~~l~~H~~~h~~~~~-----------~~C~~C~~~f~~ 44 (57)
T 3uk3_C 2 SSSRECSYCGKF--FRSNYYLNIHLRTHTGEKP-----------YKCEFCEYAAAQ 44 (57)
T ss_dssp ---CBCTTTCCB--CSCHHHHHHHHHHHHCCCC-----------EECSSSSCEESS
T ss_pred CCCccCCCCcch--hCChHHHHHHHHHcCCCCC-----------cCCCCCcchhCC
Confidence 358999999754 5555666789999987654 789999987754
No 67
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=88.35 E-value=0.18 Score=38.36 Aligned_cols=43 Identities=19% Similarity=0.393 Sum_probs=31.1
Q ss_pred ccceeeEeeecCcchhhhhhhhhhhhh-hccCCCCCCCceEEeecchhhccccCccc
Q psy16434 38 RNQTYQCLVCKNKTLFHDLAEGARHVE-RHHWDQPDKNSLFVISDRFLCNLCGNEYK 93 (745)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (745)
...+|+|.+|... |.....-.+|+. .|+.+.| |.|..||..|.
T Consensus 9 ~~k~~~C~~C~k~--f~~~~~L~~H~~~~H~~~k~-----------~~C~~C~k~F~ 52 (54)
T 2eps_A 9 VGKPYICQSCGKG--FSRPDHLNGHIKQVHTSERP-----------HKCQVWVSGPS 52 (54)
T ss_dssp SSCCEECSSSCCE--ESSHHHHHHHHHHTSCCCCC-----------CCSSSSCCSSC
T ss_pred CCCCeECCCCCcc--cCCHHHHHHHHHHhcCCCCC-----------ccCCCCCCCCC
Confidence 4568999999764 555555678887 6765544 78999998763
No 68
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=88.04 E-value=0.16 Score=39.79 Aligned_cols=51 Identities=24% Similarity=0.466 Sum_probs=35.2
Q ss_pred eeeeeccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCcccc
Q psy16434 33 EKYFTRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNEYKF 94 (745)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (745)
+.--+...+|+|..|+.. |-....-.+|+..||.... ..|.|+.||..|..
T Consensus 2 ~~~h~~~k~~~C~~C~k~--f~~~~~l~~H~~~~H~~~~---------~~~~C~~C~k~f~~ 52 (66)
T 2drp_A 2 EFTKEGEHTYRCKVCSRV--YTHISNFCRHYVTSHKRNV---------KVYPCPFCFKEFTR 52 (66)
T ss_dssp -CEEEETTEEECTTTCCE--ESSHHHHHHHHHHHSSSSC---------CCEECTTTCCEESC
T ss_pred ccccCCCcceECCCCcch--hCCHHHHHHHHHHHcCCCC---------cCeECCCCCCccCC
Confidence 344566789999999854 5555666789988663211 23899999988754
No 69
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=87.93 E-value=0.11 Score=41.92 Aligned_cols=44 Identities=27% Similarity=0.692 Sum_probs=32.9
Q ss_pred cceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCcccce
Q psy16434 39 NQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNEYKFR 95 (745)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (745)
..+|+|..|+.. |-....-.+|+..|+.+.| |.|+.||..|..+
T Consensus 15 ~~~~~C~~C~k~--f~~~~~l~~H~~~H~~~~~-----------~~C~~C~k~f~~~ 58 (74)
T 2lce_A 15 DKPYKCDRCQAS--FRYKGNLASHKTVHTGEKP-----------YRCNICGAQFNRP 58 (74)
T ss_dssp CCSBCCTTSSCC--BSCHHHHHHHHHHHCCCCS-----------EECTTTCCEESCH
T ss_pred CCCeECCCCCce--eCCHHHHHHHHHHcCCCCC-----------EECCCCCchhCCH
Confidence 568999999864 4444555789988876543 8899999887653
No 70
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=87.92 E-value=0.12 Score=39.83 Aligned_cols=43 Identities=28% Similarity=0.709 Sum_probs=31.8
Q ss_pred ceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCcccce
Q psy16434 40 QTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNEYKFR 95 (745)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (745)
.+|+|..|+.. |-....-.+|+..|+.+.| |.|+.||..|.-+
T Consensus 1 k~~~C~~C~~~--f~~~~~l~~H~~~h~~~~~-----------~~C~~C~~~f~~~ 43 (60)
T 2adr_A 1 RSFVCEVCTRA--FARQEHLKRHYRSHTNEKP-----------YPCGLCNRAFTRR 43 (60)
T ss_dssp CCBCCTTTCCC--BSCHHHHHHHHHTTTSSCS-----------EECTTTCCEESSH
T ss_pred CcCcCCCCccc--cCCHHHHHHHHHHhCCCCC-----------ccCCCCCCccCCH
Confidence 37999999764 5555566789988876543 7899999877543
No 71
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=87.54 E-value=0.13 Score=39.06 Aligned_cols=42 Identities=21% Similarity=0.542 Sum_probs=31.3
Q ss_pred eeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCcccce
Q psy16434 41 TYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNEYKFR 95 (745)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (745)
+|+|..|+.. |-....-.+|+..|+.+.| |.|+.||..|..+
T Consensus 1 p~~C~~C~~~--f~~~~~l~~H~~~h~~~~~-----------~~C~~C~~~f~~~ 42 (57)
T 1bbo_A 1 KYICEECGIR--XKKPSMLKKHIRTHTDVRP-----------YHCTYCNFSFKTK 42 (57)
T ss_dssp CCBCTTTCCB--CSSHHHHHHHHHHTSSCCC-----------EECSSSSCEESSH
T ss_pred CCcCCCCcCc--CCCHHHHHHHHHhcCCCCC-----------ccCCCCCchhcCH
Confidence 5899999754 4455556789988886654 8899999877543
No 72
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=85.83 E-value=0.19 Score=40.91 Aligned_cols=45 Identities=24% Similarity=0.682 Sum_probs=33.3
Q ss_pred ccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCcccce
Q psy16434 38 RNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNEYKFR 95 (745)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (745)
...+|+|.+|+.. |.....-.+|+..|+.+.| |.|+.||..|..+
T Consensus 15 ~~~~~~C~~C~~~--f~~~~~l~~H~~~h~~~~~-----------~~C~~C~~~f~~~ 59 (77)
T 2cot_A 15 ERRRYKCDECGKS--FSHSSDLSKHRRTHTGEKP-----------YKCDECGKAFIQR 59 (77)
T ss_dssp CSCSSBCSSSCCB--CSCHHHHHHHHTTTCCSCS-----------EECSSSCCEESSH
T ss_pred CCCCEECCCCCcc--cCCHHHHHHHHHHcCCCcC-----------eeCCCCCCccCCH
Confidence 4578999999854 4445556789888876543 8899999887654
No 73
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=85.56 E-value=0.3 Score=41.98 Aligned_cols=44 Identities=25% Similarity=0.597 Sum_probs=29.5
Q ss_pred ccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCcccc
Q psy16434 38 RNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNEYKF 94 (745)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (745)
...+|+|.+|... |-....-.+|+..|+.+.| |.|..||..|..
T Consensus 42 ~~~~~~C~~C~~~--f~~~~~l~~H~~~h~~~~~-----------~~C~~C~~~f~~ 85 (106)
T 2ee8_A 42 DERPYTCDICHKA--FRRQDHLRDHRYIHSKEKP-----------FKCQECGKGFCQ 85 (106)
T ss_dssp CSCCCBCSSSCCB--CSCHHHHHHHGGGSCCCCT-----------TSCSSSCCCCSS
T ss_pred CCCCcCCCCccch--hCCHHHHHHHHHHhCCCCC-----------eECCCcCCcccC
Confidence 3467888888653 4444555677777776544 788888877654
No 74
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=85.31 E-value=0.21 Score=40.51 Aligned_cols=44 Identities=25% Similarity=0.705 Sum_probs=33.0
Q ss_pred ccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCcccc
Q psy16434 38 RNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNEYKF 94 (745)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (745)
...+|+|.+|+.. |-....-.+|+..|+.+.| |.|+.||..|..
T Consensus 26 ~~~~~~C~~C~~~--f~~~~~l~~H~~~h~~~~~-----------~~C~~C~~~f~~ 69 (82)
T 2kmk_A 26 DTRPYPCQYCGKR--FHQKSDMKKHTFIHTGEKP-----------HKCQVCGKAFSQ 69 (82)
T ss_dssp TCCCEECSSSCCE--ESSHHHHHHHHHHHHTCCC-----------EECTTTSCEESS
T ss_pred CCCCeeCCcCChh--hCCHHHHHHHHHHhcCCCC-----------CcCCCcchhhCC
Confidence 3568999999854 5555666789988887654 889999987653
No 75
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=85.24 E-value=0.17 Score=41.14 Aligned_cols=48 Identities=23% Similarity=0.459 Sum_probs=34.0
Q ss_pred ccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCcccce
Q psy16434 38 RNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNEYKFR 95 (745)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (745)
...+|+|.+|+.. |-....-.+|+..|+-....+ .|.|..||..|..+
T Consensus 4 ~~k~~~C~~C~k~--f~~~~~L~~H~~~h~~~~~~~--------~~~C~~C~k~f~~~ 51 (78)
T 2d9h_A 4 GSSGLQCEICGFT--CRQKASLNWHQRKHAETVAAL--------RFPCEFCGKRFEKP 51 (78)
T ss_dssp SCCCEECSSSCCE--ESSHHHHHHHHHHHHHHTTTC--------CEECTTTCCEESSH
T ss_pred CCcCeECCCCCCe--eCCHHHHHHHHHHhhccCCCc--------ccCCCCCCchhCCH
Confidence 4578999999864 555556678988887532221 38899999887654
No 76
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=84.89 E-value=0.31 Score=39.98 Aligned_cols=50 Identities=26% Similarity=0.513 Sum_probs=35.3
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCcccce
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNEYKFR 95 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (745)
+...+|+|.+|... |.....-.+|+.+||..... ...|.|..||..|..+
T Consensus 11 ~~~k~~~C~~C~~~--f~~~~~l~~H~~~~~~~~~~-------~~~~~C~~C~~~f~~~ 60 (86)
T 1x6h_A 11 TGEKPYACSHCDKT--FRQKQLLDMHFKRYHDPNFV-------PAAFVCSKCGKTFTRR 60 (86)
T ss_dssp CCCCCEECSSSSCE--ESSHHHHHHHHHHTTCSSCC-------CCCEECSSSCCEESCH
T ss_pred cCCCCCcCCCCCCc--cCCHHHHHHHHHHhcCCcCC-------CcceECCCCCChhCCH
Confidence 34678999999765 44445567899999976421 1158899999887654
No 77
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=84.23 E-value=0.27 Score=39.31 Aligned_cols=46 Identities=26% Similarity=0.662 Sum_probs=34.0
Q ss_pred eccceeeEe--eecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCcccce
Q psy16434 37 TRNQTYQCL--VCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNEYKFR 95 (745)
Q Consensus 37 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (745)
+...+|+|. .|+.. |-.-..-.+|+..|+.+.| |.|+.||..|..+
T Consensus 15 ~~~~~~~C~~~~C~k~--f~~~~~l~~H~~~h~~~~~-----------~~C~~C~~~f~~~ 62 (73)
T 1f2i_G 15 PKMRPYACPVESCDRR--FSRSDELTRHIRIHTGQKP-----------FQCRICMRNFSRS 62 (73)
T ss_dssp CCCCCEECSSTTBCCE--ESSHHHHHHHHHHHHCCCC-----------EECTTTCCEESCH
T ss_pred CCCCccCCcCCCCCCc--cCCHHHHHHHHHhhCCCCC-----------eECCCCCchhCCH
Confidence 456789998 49754 5555566789988887654 7899999987643
No 78
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=83.69 E-value=0.27 Score=35.59 Aligned_cols=40 Identities=23% Similarity=0.339 Sum_probs=29.6
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhcccc
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCG 89 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (745)
+...+|+|.+|... |-.-..-.+|+..|+.+.| |.|+.||
T Consensus 6 ~~~k~~~C~~C~k~--f~~~~~l~~H~~~H~~~~~-----------~~C~~cg 45 (45)
T 2epq_A 6 SGEKPYSCPVCGLR--FKRKDRMSYHVRSHDGSVG-----------KSGPSSG 45 (45)
T ss_dssp SSCCSSEETTTTEE--CSCHHHHHHHHHHHSCCCC-----------CCCCCCC
T ss_pred CCCCCCcCCCCCcc--cCCHHHHHHHHHHccCCCC-----------CCCcCCC
Confidence 34568999999864 4555556789988886654 6788887
No 79
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=83.50 E-value=0.25 Score=39.40 Aligned_cols=43 Identities=23% Similarity=0.530 Sum_probs=33.9
Q ss_pred ceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCcccce
Q psy16434 40 QTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNEYKFR 95 (745)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (745)
.||+|.+|+.. |-....-.+|+..|.-+.| |.|+.||+.|..+
T Consensus 3 Kpy~C~~C~k~--F~~~~~L~~H~~~Ht~ekp-----------~~C~~C~k~F~~~ 45 (60)
T 4gzn_C 3 RPFFCNFCGKT--YRDASGLSRHRRAHLGYRP-----------RSCPECGKCFRDQ 45 (60)
T ss_dssp CCEECTTTCCE--ESSHHHHHHHHHHHHTCCC-----------EECTTTCCEESSH
T ss_pred CCccCCCCCCE--eCCHHHHHHHHHHhCCCcC-----------eECCCCCCCcCCH
Confidence 58999999854 5566666789999977655 7899999988654
No 80
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=83.23 E-value=0.33 Score=40.68 Aligned_cols=27 Identities=30% Similarity=0.561 Sum_probs=12.1
Q ss_pred ceeeEeeecCcchhhhhhhhhhhhhhccC
Q psy16434 40 QTYQCLVCKNKTLFHDLAEGARHVERHHW 68 (745)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (745)
.+|+|.+|... |-....-.+|+..|+-
T Consensus 34 ~~~~C~~C~~~--f~~~~~l~~H~~~h~~ 60 (95)
T 2yt9_A 34 KPYSCPVCGLR--FKRKDRMSYHVRSHDG 60 (95)
T ss_dssp CSEECSSSCCE--ESCHHHHHHHHHHHCC
T ss_pred CCCcCCCCCCc--cCCHHHHHHHHHHhcC
Confidence 44555555432 2233333455555543
No 81
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=82.64 E-value=0.39 Score=41.18 Aligned_cols=45 Identities=18% Similarity=0.561 Sum_probs=34.4
Q ss_pred ccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCcccce
Q psy16434 38 RNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNEYKFR 95 (745)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (745)
...+|+|..|... |.....-.+|+..|+...| |.|..|+..|..+
T Consensus 14 ~~~~~~C~~C~~~--f~~~~~l~~H~~~h~~~~~-----------~~C~~C~~~f~~~ 58 (106)
T 2ee8_A 14 TKKEFICKFCGRH--FTKSYNLLIHERTHTDERP-----------YTCDICHKAFRRQ 58 (106)
T ss_dssp CCCCCBCSSSCCB--CSSHHHHHHHHHHHCCSCC-----------CBCSSSCCBCSCH
T ss_pred CCcCeECCCCCCc--cCCHHHHHHHHHHcCCCCC-----------cCCCCccchhCCH
Confidence 4568999999754 5566666789999886544 8999999887643
No 82
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=81.41 E-value=0.4 Score=41.00 Aligned_cols=46 Identities=24% Similarity=0.464 Sum_probs=34.9
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCcccce
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNEYKFR 95 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (745)
...++|.|.+|+.. |-....-.+|+..|+=+.| |.|+.||..|.-+
T Consensus 24 ~~~~~h~C~~Cgk~--F~~~~~L~~H~~~H~~~k~-----------~~C~~C~k~F~~~ 69 (85)
T 2lv2_A 24 ASAECHLCPVCGES--FASKGAQERHLRLLHAAQV-----------FPCKYCPATFYSS 69 (85)
T ss_dssp CCCTTEECTTSCCE--ESSHHHHHHHHHTTSCSSS-----------EECTTSSCEESSH
T ss_pred CCCCCEECCCCCCC--cCcHHHHhhhhhhccCCCc-----------cCCCCCCCEeCCH
Confidence 35678999999864 5556666789999875543 8899999987643
No 83
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=81.27 E-value=0.38 Score=40.38 Aligned_cols=27 Identities=22% Similarity=0.442 Sum_probs=12.1
Q ss_pred ceeeEeeecCcchhhhhhhhhhhhhhccC
Q psy16434 40 QTYQCLVCKNKTLFHDLAEGARHVERHHW 68 (745)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (745)
.+|+|.+|... |.....-.+|+..|+.
T Consensus 35 ~~~~C~~C~~~--f~~~~~l~~H~~~h~~ 61 (96)
T 2dmd_A 35 KPYKCKTCDYA--AADSSSLNKHLRIHSD 61 (96)
T ss_dssp CSEECSSSCCE--ESSHHHHHHHHHHSCC
T ss_pred CCEeCCCCCCc--cCCHHHHHHHHHHhCC
Confidence 45555555432 2333333455555543
No 84
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=81.19 E-value=0.42 Score=38.74 Aligned_cols=48 Identities=19% Similarity=0.551 Sum_probs=33.4
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCcccce
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNEYKFR 95 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (745)
+...+|+|.+|... |-....-.+|+.++|.... ..|.|..||..|..+
T Consensus 11 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~~h~~~~---------~~~~C~~C~~~f~~~ 58 (77)
T 2ct1_A 11 SGEKPYECYICHAR--FTQSGTMKMHILQKHTENV---------AKFHCPHCDTVIARK 58 (77)
T ss_dssp SCCCSEECTTTCCE--ESCHHHHHHHHHHHSSSSC---------SSEECSSSSCEESSH
T ss_pred CCCCCeECCCcCch--hCCHHHHHHHHHHhcCCCC---------CccCCCCCCCccCCH
Confidence 34578999999764 4455566789886665421 148999999877643
No 85
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=80.98 E-value=0.47 Score=39.81 Aligned_cols=44 Identities=20% Similarity=0.395 Sum_probs=30.9
Q ss_pred ccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCcccc
Q psy16434 38 RNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNEYKF 94 (745)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (745)
...+|+|.+|.. .|.....-.+|+..|+...| |.|..||..|..
T Consensus 5 ~~~~~~C~~C~~--~f~~~~~l~~H~~~h~~~~~-----------~~C~~C~~~f~~ 48 (96)
T 2dmd_A 5 SSGPHKCEVCGK--CFSRKDKLKTHMRCHTGVKP-----------YKCKTCDYAAAD 48 (96)
T ss_dssp CCCCCCBTTTTB--CCCCHHHHHHHGGGCCCCCS-----------EECSSSCCEESS
T ss_pred CCcCeECCCCCC--ccCCHHHHHHHHHhcCCCCC-----------EeCCCCCCccCC
Confidence 356899999975 45566666789998886543 567777766643
No 86
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=79.78 E-value=0.67 Score=33.55 Aligned_cols=39 Identities=18% Similarity=0.267 Sum_probs=28.6
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccc
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLC 88 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (745)
+...+|+|.+|+.. |-....-.+|...|+.+.| |.|+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~~~-----------~~C~~C 46 (46)
T 2el6_A 8 AGVNPYKCSQCEKS--FSGKLRLLVHQRMHTREKP-----------SGPSSG 46 (46)
T ss_dssp CCCCSEECSSSSCE--ESSHHHHHHHHGGGCCSSC-----------CSCCCC
T ss_pred CCCCCeECCCCCcc--cCCHHHHHHHHHHcCCCCC-----------CCCCCC
Confidence 34678999999764 5555666789888887655 677776
No 87
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=79.43 E-value=0.56 Score=41.09 Aligned_cols=44 Identities=25% Similarity=0.616 Sum_probs=28.0
Q ss_pred ccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCcccc
Q psy16434 38 RNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNEYKF 94 (745)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (745)
...+|+|.+|+.. |-....-.+|+..|+.+.| |.|..||..|..
T Consensus 63 ~~~~~~C~~C~~~--f~~~~~l~~H~~~h~~~~~-----------~~C~~C~~~f~~ 106 (124)
T 2dlq_A 63 SEQVFTCSVCQET--FRRRMELRLHMVSHTGEMP-----------YKCSSCSQQFMQ 106 (124)
T ss_dssp CCCCEECSSSCCE--ESSHHHHHHHHHHHSSSCS-----------EECSSSCCEESS
T ss_pred CCCCeECCCCCCc--cCCHHHHHHHHHHcCCCCC-----------ccCCCccchhCC
Confidence 3456777777643 4444455677777776544 678888876653
No 88
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=78.67 E-value=0.62 Score=40.28 Aligned_cols=27 Identities=26% Similarity=0.602 Sum_probs=12.2
Q ss_pred cceeeEeeecCcchhhhhhhhhhhhhhccC
Q psy16434 39 NQTYQCLVCKNKTLFHDLAEGARHVERHHW 68 (745)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (745)
..+|+| .|... |.....-.+|+..|+.
T Consensus 8 ~k~~~C-~C~~~--f~~~~~l~~H~~~h~~ 34 (110)
T 2csh_A 8 DKLYPC-QCGKS--FTHKSQRDRHMSMHLG 34 (110)
T ss_dssp CCCEEC-TTSCE--ESSHHHHHHHHHHHSC
T ss_pred CCCEec-cCCCc--cCCHHHHHHHHHHcCC
Confidence 344555 55432 3333344455555544
No 89
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=78.66 E-value=0.54 Score=41.20 Aligned_cols=42 Identities=26% Similarity=0.498 Sum_probs=26.4
Q ss_pred cceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCccc
Q psy16434 39 NQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNEYK 93 (745)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (745)
..+|+|..|+.. |.....-.+|+..|+.+. .|.|..||..|.
T Consensus 5 ~~~~~C~~C~~~--f~~~~~l~~H~~~h~~~~-----------~~~C~~C~~~f~ 46 (124)
T 2dlq_A 5 SSGVECPTCHKK--FLSKYYLKVHNRKHTGEK-----------PFECPKCGKCYF 46 (124)
T ss_dssp CSSCCCTTTCCC--CSSHHHHHHHHHHHSSCC-----------SCBCTTTCCBCS
T ss_pred CCCCCCCCCCCc--CCCHHHHHHHHHhCCCCC-----------CeECCCCCchhc
Confidence 456777777543 555555567777776543 366777776654
No 90
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=78.32 E-value=0.56 Score=40.60 Aligned_cols=45 Identities=18% Similarity=0.431 Sum_probs=32.3
Q ss_pred eccceeeEeeecCcchh-hhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCcccce
Q psy16434 37 TRNQTYQCLVCKNKTLF-HDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNEYKFR 95 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (745)
+...+|+|.+|+.. | .....-.+|+..| -+. .|.|+.||+.|+.+
T Consensus 30 ~~~~~~~C~~C~k~--F~~~~~~L~~H~~~h-~~k-----------~~~C~~Cgk~F~~~ 75 (96)
T 2ctd_A 30 VDKGSVSCPTCQAV--GRKTIEGLKKHMENC-KQE-----------MFTCHHCGKQLRSL 75 (96)
T ss_dssp HHTSCEECTTTCSC--EESSHHHHHHHHHHH-CCC-----------CCCCSSSCCCCSSH
T ss_pred cCCCCcCCCCCCCC--cccCHHHHHHHHHHH-CCC-----------CeECCCCCCeeCCH
Confidence 45778999999864 4 3444456788888 433 38899999988643
No 91
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=78.21 E-value=0.48 Score=39.17 Aligned_cols=44 Identities=25% Similarity=0.753 Sum_probs=31.1
Q ss_pred ccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCcccc
Q psy16434 38 RNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNEYKF 94 (745)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (745)
...+|+|..|+.. |.....-.+|+..|+.+.| |.|..||..|.-
T Consensus 31 ~~~~~~C~~C~~~--f~~~~~l~~H~~~h~~~~~-----------~~C~~C~~~f~~ 74 (90)
T 1a1h_A 31 GQKPFQCRICMRN--FSRSDHLTTHIRTHTGEKP-----------FACDICGRKFAR 74 (90)
T ss_dssp CCCCEECTTTCCE--ESCHHHHHHHHHHHHCCCC-----------EECTTTCCEESS
T ss_pred CCCCccCCCCCcc--cCCHHHHHHHHHHcCCCCC-----------ccCCCCCchhCC
Confidence 3467899999753 4445555678888876544 789999987653
No 92
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=77.51 E-value=0.71 Score=37.24 Aligned_cols=42 Identities=17% Similarity=0.475 Sum_probs=29.6
Q ss_pred ccceeeEee--ecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCcc
Q psy16434 38 RNQTYQCLV--CKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNEY 92 (745)
Q Consensus 38 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (745)
...+|+|.+ |... |.....-.+|+..|+-..| |.|..||..|
T Consensus 35 ~~~~~~C~~~~C~k~--f~~~~~L~~H~~~H~~~~~-----------~~C~~C~k~F 78 (79)
T 2dlk_A 35 HQKSFSCPEPACGKS--FNFKKHLKEHMKLHSDTRD-----------YICEFSGPSS 78 (79)
T ss_dssp SCCCEECSCTTTCCE--ESSHHHHHHHHHHHHTSCC-----------CSCCSSSCCC
T ss_pred CCCCeECCCCCCcCc--cCCHHHHHHHHHHhCCCCC-----------eeCCCCCCCC
Confidence 456789988 8754 4445555678888876544 7899998764
No 93
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=77.00 E-value=0.87 Score=32.90 Aligned_cols=39 Identities=13% Similarity=0.162 Sum_probs=28.9
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccc
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLC 88 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (745)
+...+|+|.+|+.. |-....-.+|+..|+.+.| |.|+.|
T Consensus 8 ~~~k~~~C~~C~k~--F~~~~~L~~H~~~H~~~~~-----------~~C~~C 46 (46)
T 2elz_A 8 SVEKPYKCEDCGKG--YNRRLNLDMHQRVHMGEKT-----------SGPSSG 46 (46)
T ss_dssp CCCSSCBCSSSCCB--CSSHHHHHHHGGGGGSCCC-----------CCSCCC
T ss_pred CCCCCeeCcccCch--hCCHHHHHHHHHhcCCCCC-----------CCCCCC
Confidence 44678999999864 5555666789999987665 667776
No 94
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=76.76 E-value=0.97 Score=32.56 Aligned_cols=39 Identities=23% Similarity=0.319 Sum_probs=28.6
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccc
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLC 88 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (745)
+...+|+|.+|+.. |-....-.+|+..|+.+.| |.|+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~~~-----------~~C~~C 46 (46)
T 2eml_A 8 TGEKPYECSVCGKA--FSHRQSLSVHQRIHSGKKP-----------SGPSSG 46 (46)
T ss_dssp SSCCSEECSSSCCE--ESSHHHHHHHHGGGSSCCC-----------SCSSCC
T ss_pred CCCCCeeCCCcCCc--cCCHHHHHHHHHHhcCCCC-----------CCCCCC
Confidence 45678999999764 5555566789989887654 677776
No 95
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=76.69 E-value=0.84 Score=32.83 Aligned_cols=39 Identities=21% Similarity=0.227 Sum_probs=28.9
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccc
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLC 88 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (745)
+...+|+|.+|+.. |-....-.+|+..|+.+.| |.|+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~k~-----------~~C~~C 46 (46)
T 2emm_A 8 TGERPHKCNECGKS--FIQSAHLIQHQRIHTGEKP-----------SGPSSG 46 (46)
T ss_dssp SCCCSEECSSSCCE--ESSHHHHHHHHHHHSCCCT-----------TSSSCC
T ss_pred CCCCCeeCCCCChh--hCCHHHHHHHHHHhCCCCC-----------CCCCCC
Confidence 34578999999754 5555666789999887655 778776
No 96
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=76.28 E-value=1 Score=32.40 Aligned_cols=39 Identities=26% Similarity=0.300 Sum_probs=28.4
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccc
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLC 88 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (745)
+...+|+|.+|+.. |-....-.+|+..|+.+.| |.|+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~~~-----------~~C~~C 46 (46)
T 2eme_A 8 SGEKPYVCDYCGKA--FGLSAELVRHQRIHTGEKP-----------SGPSSG 46 (46)
T ss_dssp CCCCSEECSSSCCE--ESSHHHHHHHHGGGCCCSC-----------CSSCCC
T ss_pred CCCCCeECCCCChh--hCCHHHHHHHHHhcCCCCC-----------CCCCCC
Confidence 34578999999864 5555666789988876654 677776
No 97
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=75.67 E-value=0.83 Score=32.94 Aligned_cols=39 Identities=15% Similarity=0.285 Sum_probs=28.4
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccc
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLC 88 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (745)
+...+|+|.+|+.. |-....-.+|+..|+.+.| |.|+.|
T Consensus 8 ~~~~~~~C~~C~k~--f~~~~~L~~H~~~H~~~k~-----------~~C~~C 46 (46)
T 2ytg_A 8 TGEKPFKCGECGKS--YNQRVHLTQHQRVHTGEKP-----------SGPSSG 46 (46)
T ss_dssp SSCCSEECTTTCCE--ESSSHHHHTTGGGGSSCCS-----------SCSCCC
T ss_pred CCCCCeECCCCCcc--cCCHHHHHHHHHHcCCCCC-----------CCCCCC
Confidence 44678999999764 4445555789988887665 678776
No 98
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=75.57 E-value=0.98 Score=37.70 Aligned_cols=44 Identities=27% Similarity=0.620 Sum_probs=31.1
Q ss_pred ccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCcccc
Q psy16434 38 RNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNEYKF 94 (745)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (745)
...+|+|..|... |.....-.+|+..|+.+.| |.|..|+..|..
T Consensus 4 ~~~~~~C~~C~~~--f~~~~~l~~H~~~h~~~~~-----------~~C~~C~~~f~~ 47 (95)
T 2yt9_A 4 GSSGVACEICGKI--FRDVYHLNRHKLSHSGEKP-----------YSCPVCGLRFKR 47 (95)
T ss_dssp CCSCEECSSSCCE--ESSSHHHHHHHHHSCSSCS-----------EECSSSCCEESC
T ss_pred CCCCeECCCCCCc--cCChHHHHHHHHhcCCCCC-----------CcCCCCCCccCC
Confidence 4578999999754 5556666789988876654 566667666643
No 99
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=75.49 E-value=0.96 Score=32.59 Aligned_cols=39 Identities=15% Similarity=0.271 Sum_probs=28.6
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccc
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLC 88 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (745)
+...+|+|.+|+.. |-....-.+|+..|+.+.| |.|+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~~~-----------~~C~~C 46 (46)
T 2enc_A 8 SGEKPFKCEECGKG--FYTNSQCYSHQRSHSGEKP-----------SGPSSG 46 (46)
T ss_dssp CCCCSEECSSSCCE--ESSHHHHHHHHHHSCCSSC-----------CSSCCC
T ss_pred CCCCCcCCCCCCCc--CCChHHHHHHHHHhCCCCC-----------CCCCCC
Confidence 34568999999764 5555666789988877655 677776
No 100
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=75.17 E-value=1.2 Score=32.05 Aligned_cols=39 Identities=21% Similarity=0.215 Sum_probs=28.3
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccc
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLC 88 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (745)
+...+|+|.+|+.. |-....-.+|+..|+-+.| |.|+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~k~-----------~~C~~C 46 (46)
T 2em7_A 8 TGEKPYKCEECGKG--FICRRDLYTHHMVHTGEKP-----------SGPSSG 46 (46)
T ss_dssp SCCCSEECSSSCCE--ESCHHHHHHHGGGGTTCCC-----------SSTTCC
T ss_pred CCCcCccCCCccch--hCCHHHHHHHHHHhCCCCC-----------CCCCCC
Confidence 34578999999754 5556666789888876554 677776
No 101
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=75.13 E-value=0.67 Score=38.57 Aligned_cols=26 Identities=23% Similarity=0.552 Sum_probs=11.0
Q ss_pred eeeEeeecCcchhhhhhhhhhhhhhccC
Q psy16434 41 TYQCLVCKNKTLFHDLAEGARHVERHHW 68 (745)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (745)
+|+|.+|+.. |-....-.+|+..|+.
T Consensus 3 ~~~C~~C~k~--f~~~~~L~~H~~~H~~ 28 (88)
T 1llm_C 3 PFQCRICMRN--FSRSDHLTTHIRTHTG 28 (88)
T ss_dssp CEECTTTCCE--ESCHHHHHHHHHHHHC
T ss_pred CCcCCCCCCc--cCCHHHHHHHHHHcCC
Confidence 4555555432 2222333445544443
No 102
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=74.87 E-value=0.73 Score=37.21 Aligned_cols=41 Identities=22% Similarity=0.681 Sum_probs=31.2
Q ss_pred eeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCcccc
Q psy16434 41 TYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNEYKF 94 (745)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (745)
+|+|.+|+.. |-....-.+|+..|+...| |.|..||..|.-
T Consensus 1 ~~~C~~C~~~--f~~~~~l~~H~~~h~~~~~-----------~~C~~C~~~f~~ 41 (82)
T 2kmk_A 1 SFDCKICGKS--FKRSSTLSTHLLIHSDTRP-----------YPCQYCGKRFHQ 41 (82)
T ss_dssp CEECSSSCCE--ESSHHHHHHHHHHHHTCCC-----------EECSSSCCEESS
T ss_pred CccCCCCccc--ccCchhHHHHHHHcCCCCC-----------eeCCcCChhhCC
Confidence 5899999753 5555666789999886554 789999987754
No 103
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=74.33 E-value=1.1 Score=32.22 Aligned_cols=39 Identities=23% Similarity=0.315 Sum_probs=27.9
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccc
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLC 88 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (745)
+...+|+|.+|+.. |-....-.+|+..|+.+.| |.|+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~k~-----------~~C~~C 46 (46)
T 2ene_A 8 TGEKPYKCNECGKV--FRHNSYLSRHQRIHTGEKP-----------SGPSSG 46 (46)
T ss_dssp CCSSSEECSSSCCE--ESSHHHHHHHHTTTCCCCC-----------CSCCCC
T ss_pred CCCCCeECCCCCch--hCChHHHHHHHhhcCCCCC-----------CCCCCC
Confidence 34678999999764 4455556789888876654 677776
No 104
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=74.30 E-value=0.74 Score=39.77 Aligned_cols=45 Identities=27% Similarity=0.568 Sum_probs=33.2
Q ss_pred ccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCcccce
Q psy16434 38 RNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNEYKFR 95 (745)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (745)
...+|+|.+|... |.....-.+|+..|+-+. .|.|..||..|..+
T Consensus 34 ~~~~~~C~~C~~~--f~~~~~l~~H~~~h~~~~-----------~~~C~~C~~~f~~~ 78 (110)
T 2csh_A 34 GLRPYGCGVCGKK--FKMKHHLVGHMKIHTGIK-----------PYECNICAKRFMWR 78 (110)
T ss_dssp CCCSEECTTTSCE--ESSSHHHHHHHTTTCCCC-----------CEECSSSCCEESCH
T ss_pred CCcCccCCCCCcc--cCCHHHHHHHHHHcCCCC-----------CeeCCCCcchhcCH
Confidence 3568999999754 555556678988887654 38899999877643
No 105
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=74.07 E-value=1.1 Score=32.34 Aligned_cols=39 Identities=23% Similarity=0.306 Sum_probs=28.2
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccc
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLC 88 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (745)
+...+|+|.+|... |-....-.+|+..|+.+.| |.|+.|
T Consensus 8 ~~~~~~~C~~C~k~--f~~~~~L~~H~~~H~~~k~-----------~~C~~C 46 (46)
T 2ep0_A 8 TGEKPYKCDVCHKS--FRYGSSLTVHQRIHTGEKP-----------SGPSSG 46 (46)
T ss_dssp TTCCSEECSSSCCE--ESSHHHHHHHHTTTSSSCC-----------CSCCCC
T ss_pred CCCCCeeCcccCcc--cCChHHHHHHHHHhCCCCC-----------CCCCCC
Confidence 34578999999754 5555666789888876654 677776
No 106
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=74.02 E-value=1.1 Score=32.26 Aligned_cols=39 Identities=18% Similarity=0.207 Sum_probs=28.1
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccc
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLC 88 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (745)
+...+|+|.+|+.. |-....-.+|+..|+-+.| |.|+.|
T Consensus 8 ~~~~~~~C~~C~k~--f~~~~~L~~H~~~H~~~~~-----------~~C~~C 46 (46)
T 2em5_A 8 SSTKSHQCHECGRG--FTLKSHLNQHQRIHTGEKP-----------SGPSSG 46 (46)
T ss_dssp CCSCSEECSSSCCE--ESSHHHHHHHHTTTSCSCC-----------SSCCCC
T ss_pred CCCCCeECCcCCCc--cCCHHHHHHHHHHhCCCCC-----------CCCCCC
Confidence 44678999999754 5555666789888876554 678776
No 107
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=73.90 E-value=1.2 Score=32.06 Aligned_cols=33 Identities=21% Similarity=0.467 Sum_probs=24.0
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|.+|+.. |-....-.+|+..|+.+.|
T Consensus 8 ~~~k~~~C~~C~k~--F~~~~~L~~H~~~H~~~k~ 40 (46)
T 2emf_A 8 TGGKHFECTECGKA--FTRKSTLSMHQKIHTGEKP 40 (46)
T ss_dssp SSSCCEECSSSCCE--ESCHHHHHHHGGGTSCSSC
T ss_pred CCCCCeECCCCCch--hCCHHHHHHHHHHhCCCCC
Confidence 44678999999754 5555556789988876655
No 108
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=73.60 E-value=0.24 Score=42.65 Aligned_cols=46 Identities=20% Similarity=0.398 Sum_probs=33.5
Q ss_pred eccceeeEeeecCcchhh-hhhhhhhhhhhccC-CCCCCCceEEeecchhhccccCcccce
Q psy16434 37 TRNQTYQCLVCKNKTLFH-DLAEGARHVERHHW-DQPDKNSLFVISDRFLCNLCGNEYKFR 95 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (745)
+...+|+|.+|... |- ....-.+|+..|+- . ..|.|..||..|+.+
T Consensus 20 ~~~~~~~C~~C~k~--f~~~~~~L~~H~~~h~~~~-----------~~~~C~~C~k~F~~~ 67 (98)
T 2gqj_A 20 HERGEAVCPTCNVV--TRKTLVGLKKHMEVCQKLQ-----------DALKCQHCRKQFKSK 67 (98)
T ss_dssp TTTSCCCCTTTCCC--CSSCSHHHHHHHHHHHHHH-----------HHHSCSSSCCCCSCH
T ss_pred ccCCCcCCCCCCCC--hhhhHHHHHHHHHHHcCCC-----------CCEECCCCCCccCCH
Confidence 45678999999864 44 34445689888875 2 359999999988654
No 109
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=73.56 E-value=1 Score=32.49 Aligned_cols=39 Identities=18% Similarity=0.267 Sum_probs=28.2
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccc
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLC 88 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (745)
+...+|+|.+|+.. |-....-.+|+..|+.+.| |.|+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~~~-----------~~C~~C 46 (46)
T 2ysp_A 8 TGEKPYKCEKCGKG--YNSKFNLDMHQKVHTGERP-----------SGPSSG 46 (46)
T ss_dssp SSCCSEEETTTTEE--ESCHHHHHHHHTTSCSCCS-----------SCCSCC
T ss_pred CCCCCeECCCCCCc--cCCHHHHHHHHHhhCCCCC-----------CCCCCC
Confidence 34578999999753 5555666789888876655 677776
No 110
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=73.52 E-value=0.98 Score=32.61 Aligned_cols=39 Identities=13% Similarity=0.203 Sum_probs=28.6
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccc
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLC 88 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (745)
+...+|+|.+|+.. |-....-.+|+..|+.+.| |.|+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~~~-----------~~C~~C 46 (46)
T 2em8_A 8 SGEKPYKCVECGKG--YKRRLDLDFHQRVHTGEKL-----------SGPSSG 46 (46)
T ss_dssp CSCCSEECSSSCCE--ESSHHHHHHHHHHHHCCCC-----------CCSCCC
T ss_pred CCCCCeECcccCch--hCCHHHHHHHHHHHcCCCC-----------CCCCCC
Confidence 34678999999764 5555666789999987655 667776
No 111
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=73.49 E-value=1.1 Score=32.15 Aligned_cols=39 Identities=18% Similarity=0.221 Sum_probs=28.5
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccc
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLC 88 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (745)
+...+|+|.+|+.. |-....-.+|+..|+.+.| |.|+.|
T Consensus 8 ~~~k~~~C~~C~k~--F~~~~~L~~H~~~H~~~~~-----------~~C~~C 46 (46)
T 2em0_A 8 MGEKTWKCRECDMC--FSQASSLRLHQNVHVGEKP-----------SGPSSG 46 (46)
T ss_dssp CCCCCCCCSSSCCC--CSSHHHHHHHGGGGSSSSC-----------SCSSCC
T ss_pred CCCcCeECCCCCcc--cCCHHHHHHHHHHcCCCCC-----------cCCCCC
Confidence 34678999999754 5556666789988877655 667776
No 112
>1eo1_A Hypothetical protein MTH1175; mixed A/B protein, mixed beta sheet, strand order 321456; NMR {Methanothermobacterthermautotrophicus} SCOP: c.55.5.1
Probab=72.91 E-value=7.7 Score=34.92 Aligned_cols=52 Identities=23% Similarity=0.235 Sum_probs=41.4
Q ss_pred HHHHHHHcCCcEEEeCCcccHHHHHHHHHcCCeEEEeCCHHHHHHHHHHhCCe
Q psy16434 647 QIKAIADTGANVVVAGAKFGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNAT 699 (745)
Q Consensus 647 ~V~~I~~~gvnVVl~~~~I~d~al~~L~k~gIl~ir~v~k~dLeRIaraTGA~ 699 (745)
..+.|.+.||++|++. +|.+-+...|.++||-++.......-+-|.+...+.
T Consensus 57 ~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~i~eal~~~~~g~ 108 (124)
T 1eo1_A 57 TAQIIANNGVKAVIAS-SPGPNAFEVLNELGIKIYRATGTSVEENLKLFTEGN 108 (124)
T ss_dssp HHHHHHHTTCCEEEEC-CSSHHHHHHHHHHTCEEEECCSCCHHHHHHHHHTTC
T ss_pred HHHHHHHCCCCEEEEC-CcCHHHHHHHHHCCCEEEEcCCCCHHHHHHHHHhCC
Confidence 4666778999999998 599999999999999999976655555555555555
No 113
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=72.70 E-value=0.98 Score=32.53 Aligned_cols=38 Identities=18% Similarity=0.322 Sum_probs=27.9
Q ss_pred ccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccc
Q psy16434 38 RNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLC 88 (745)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (745)
...+|+|.+|+.. |.....-.+|+..|+.+.| |.|+.|
T Consensus 9 ~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~k~-----------~~C~~C 46 (46)
T 2epz_A 9 GEKPFDCIDCGKA--FSDHIGLNQHRRIHTGEKP-----------SGPSSG 46 (46)
T ss_dssp CCCSBCCTTTCCC--BSSHHHHHHHHTTTTTCCC-----------CSSCCC
T ss_pred CCCCeECCCCCce--eCCHHHHHHHHHHhCCCCC-----------CCCCCC
Confidence 4568999999764 5555566789988887655 677776
No 114
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=72.67 E-value=1.5 Score=31.49 Aligned_cols=39 Identities=21% Similarity=0.198 Sum_probs=28.2
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccc
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLC 88 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (745)
+...+|+|.+|+.. |-....-.+|+..|+-+.| |.|+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~k~-----------~~C~~C 46 (46)
T 2el4_A 8 TGVKPYGCSQCAKT--FSLKSQLIVHQRSHTGVKP-----------SGPSSG 46 (46)
T ss_dssp CCCCSEECSSSSCE--ESSHHHHHHHGGGSSSCCC-----------SCCTTC
T ss_pred CCCCceECCCCCch--hCCHHHHHHHHHHhCCCCC-----------CCCCCC
Confidence 44678999999754 5555666789988876655 667766
No 115
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=72.64 E-value=1.1 Score=32.26 Aligned_cols=39 Identities=23% Similarity=0.264 Sum_probs=28.3
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccc
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLC 88 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (745)
+...+|+|.+|+.. |-....-.+|+..|+-+.| |.|+.|
T Consensus 8 ~~~~~~~C~~C~k~--F~~~~~L~~H~~~H~~~~~-----------~~C~~C 46 (46)
T 2eoe_A 8 TGEKPYKCNECGKV--FTQNSHLANHQRIHTGVKP-----------SGPSSG 46 (46)
T ss_dssp CCCCSSEETTTTEE--CSSHHHHHHHHGGGSCCCS-----------CSSCCC
T ss_pred CCCCCeECCCcChh--hCCHHHHHHHHHHcCCCCC-----------CCCCCC
Confidence 44678999999754 5555666789988876655 677776
No 116
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=72.44 E-value=1 Score=32.34 Aligned_cols=39 Identities=18% Similarity=0.168 Sum_probs=28.5
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccc
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLC 88 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (745)
+...+|+|.+|+.. |-....-.+|+..|+.+.| |.|+.|
T Consensus 8 ~~~~~~~C~~C~k~--f~~~~~L~~H~~~H~~~~~-----------~~C~~C 46 (46)
T 2eov_A 8 TGEKPYKCSDCGKS--FTWKSRLRIHQKCHTGERH-----------SGPSSG 46 (46)
T ss_dssp SSCCSCBCSSSCCB--CSSHHHHHHHHHHHSCCSS-----------CCSCCC
T ss_pred CCCCCccCCccChh--hCCHHHHHHHHHhcCCCCC-----------CCCCCC
Confidence 34578999999854 5555666789988886655 677776
No 117
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=72.22 E-value=1.6 Score=31.25 Aligned_cols=39 Identities=21% Similarity=0.264 Sum_probs=28.2
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccc
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLC 88 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (745)
+...+|+|.+|+.. |-....-.+|+..|+-+.| |.|+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~~~-----------~~C~~C 46 (46)
T 2em9_A 8 TGEKPYNCKECGKS--FRWASCLLKHQRVHSGEKP-----------SGPSSG 46 (46)
T ss_dssp CCCCSEECSSSCCE--ESSHHHHHHHGGGGTSCCC-----------CSTTCC
T ss_pred CCCcCeECCccccc--cCChHHHHHHHHHhCCCCC-----------CCCCCC
Confidence 34578999999764 5555566789888876654 677776
No 118
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=71.69 E-value=1.4 Score=31.63 Aligned_cols=33 Identities=24% Similarity=0.510 Sum_probs=24.2
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|..|+.. |-....-.+|+..|+.+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~k~ 40 (46)
T 2ema_A 8 TGEKRYKCNECGKV--FSRNSQLSQHQKIHTGEKP 40 (46)
T ss_dssp TTSCCEECSSSCCE--ESSHHHHHHHHTGGGCCCC
T ss_pred CCCcCcCCCCCcch--hCCHHHHHHHHHhcCCCCC
Confidence 34678999999764 5555556789988887665
No 119
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=71.06 E-value=1.5 Score=31.58 Aligned_cols=33 Identities=24% Similarity=0.454 Sum_probs=24.3
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|..|+.. |-....-.+|+..|+-+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~k~ 40 (46)
T 2ytj_A 8 TGEKPYICAECGKA--FTIRSNLIKHQKIHTKQKP 40 (46)
T ss_dssp SSCCSEECSSSCCE--ESSHHHHHHHHHHTSCCCC
T ss_pred CCCcCeECCCCChh--hCCHHHHHHHHHHcCCCCC
Confidence 34578999999764 5555666789988876655
No 120
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=70.89 E-value=1 Score=32.30 Aligned_cols=39 Identities=21% Similarity=0.275 Sum_probs=28.2
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccc
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLC 88 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (745)
+...+|+|..|+.. |-....-.+|+..|+-+.| |.|+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~~~-----------~~C~~C 46 (46)
T 2eq4_A 8 TGEKLYNCKECGKS--FSRAPCLLKHERLHSGEKP-----------SGPSSG 46 (46)
T ss_dssp SCCCCCCBTTTTBC--CSCHHHHHHHHHHCCSSSC-----------CCCCCC
T ss_pred CCCCCeECCCCCCc--cCchHHHHHHHHhcCCCCC-----------CCCCCC
Confidence 45678999999764 5555566789888876554 677776
No 121
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=70.60 E-value=1.5 Score=34.27 Aligned_cols=41 Identities=20% Similarity=0.421 Sum_probs=25.2
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCccc
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNEYK 93 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (745)
+...+|+|.+|+..--..+- +...|+-.. .|.|+.||..|.
T Consensus 10 ~~~k~~~C~~C~k~F~~~~~-----l~~~H~~~k-----------~~~C~~C~k~f~ 50 (62)
T 1vd4_A 10 TNRASFKCPVCSSTFTDLEA-----NQLFDPMTG-----------TFRCTFCHTEVE 50 (62)
T ss_dssp CSSSEEECSSSCCEEEHHHH-----HHHEETTTT-----------EEBCSSSCCBCE
T ss_pred CCCCCccCCCCCchhccHHH-----hHhhcCCCC-----------CEECCCCCCccc
Confidence 45678999999864322211 113443332 488999998765
No 122
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=70.40 E-value=1.1 Score=32.15 Aligned_cols=39 Identities=26% Similarity=0.326 Sum_probs=28.4
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccc
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLC 88 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (745)
+...+|+|.+|+.. |-....-.+|+..|+.+.| |.|+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~~~-----------~~C~~C 46 (46)
T 2yu8_A 8 TGEKPYKCNECGKV--FTQNSHLARHRRVHTGGKP-----------SGPSSG 46 (46)
T ss_dssp CCCSSEECSSSCCE--ESSSHHHHHHTHHHHSCCC-----------SCSCCC
T ss_pred CCCCCeECCcCCch--hCCHHHHHHHHHhcCCCCC-----------CCCCCC
Confidence 45678999999754 5555566789988887655 677776
No 123
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=70.02 E-value=1.4 Score=31.54 Aligned_cols=39 Identities=18% Similarity=0.118 Sum_probs=27.7
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccc
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLC 88 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (745)
+...+|+|.+|+.. |-....-.+|+..|+-+.| |.|+.|
T Consensus 8 ~~~k~~~C~~C~k~--F~~~~~L~~H~~~H~~~k~-----------~~C~~C 46 (46)
T 2epw_A 8 TGEKPCKCTECGKA--FCWKSQLIMHQRTHVDDKH-----------SGPSSG 46 (46)
T ss_dssp CCCCSEECSSSCCE--ESSSHHHHHHHHHCCSCCC-----------SCCCCC
T ss_pred CCCCCeeCCCCCCc--cCCHHHHHHHHHHhCCCCC-----------CCCCCC
Confidence 34568999999754 4455556789988876654 677776
No 124
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=69.95 E-value=1.3 Score=39.20 Aligned_cols=50 Identities=22% Similarity=0.346 Sum_probs=32.7
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCC-CCCCCceEEeecchhhccccCccccee
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWD-QPDKNSLFVISDRFLCNLCGNEYKFRN 96 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (745)
+...+|+|..|+.. |-....-.+|+.++|-+ ..++ .|.|+.||..|+.+.
T Consensus 14 ~gekpy~C~~Cgk~--F~~~~~L~~H~r~~H~~~~~ek--------pf~C~~Cgk~F~~~~ 64 (102)
T 2ghf_A 14 KVEGGYECKYCTFQ--TPDLNMFTFHVDSEHPNVVLNS--------SYVCVECNFLTKRYD 64 (102)
T ss_dssp CCCSSEECSSCSCE--ESCHHHHHHHHHHHCSSCCCSC--------CEEETTTTEEESSTH
T ss_pred CCCcCcCCCCCCCc--cCCHHHHHHHHHhhCCCCCCCC--------CcCCCCCCcccCCHH
Confidence 34568999999864 44455556898864422 1111 388999999886543
No 125
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=69.91 E-value=1.3 Score=31.83 Aligned_cols=39 Identities=21% Similarity=0.335 Sum_probs=28.0
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccc
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLC 88 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (745)
+...+|+|.+|+.. |-....-.+|+..|+-+.| |.|+.|
T Consensus 8 ~~~~~~~C~~C~k~--f~~~~~L~~H~~~H~~~k~-----------~~C~~C 46 (46)
T 2eoq_A 8 TGEKPFKCDICGKS--FCGRSRLNRHSMVHTAEKP-----------SGPSSG 46 (46)
T ss_dssp SSSCSCCCSSSCCC--CSSHHHHHHHHHHTTCCCS-----------SSCCCC
T ss_pred CCCCCcCCCcCCch--hCCHHHHHHHHHHcCCCCC-----------CCCCCC
Confidence 34578999999754 5555666789888876654 677766
No 126
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=69.51 E-value=1.4 Score=31.79 Aligned_cols=39 Identities=21% Similarity=0.330 Sum_probs=28.3
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccc
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLC 88 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (745)
+...+|+|.+|+.. |-....-.+|+..|+-+.| |.|+.|
T Consensus 8 ~~~k~~~C~~C~k~--F~~~~~L~~H~~~H~~~k~-----------~~C~~C 46 (46)
T 2emk_A 8 TGEKPYECKECGKA--FSQTTHLIQHQRVHTGEKP-----------SGPSSG 46 (46)
T ss_dssp SSSCSCBCSSSCCB--CSCHHHHHHHHHHHSSCCC-----------SSCCCC
T ss_pred CCCCceECCCCCch--hCCHHHHHHHHHHcCCCCC-----------CCCCCC
Confidence 45678999999764 5555566789999876654 677766
No 127
>1o13_A Probable NIFB protein; ribonuclease H-like motif fold, structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.83A {Thermotoga maritima} SCOP: c.55.5.1 PDB: 1t3v_A
Probab=69.43 E-value=7.6 Score=35.90 Aligned_cols=53 Identities=13% Similarity=0.160 Sum_probs=42.5
Q ss_pred HHHHHHHHcCCcEEEeCCcccHHHHHHHHHcCCeEEEeCCHHHHHHHHHHhCCe
Q psy16434 646 EQIKAIADTGANVVVAGAKFGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNAT 699 (745)
Q Consensus 646 ~~V~~I~~~gvnVVl~~~~I~d~al~~L~k~gIl~ir~v~k~dLeRIaraTGA~ 699 (745)
..++.|.+.||++||+. +|.+-+...|.++||-++.......-+.|.+...++
T Consensus 67 ~~a~~L~~~gv~vVI~g-~IG~~a~~~L~~~GI~v~~~~~g~i~eal~~~~~G~ 119 (136)
T 1o13_A 67 AVPNFVKEKGAELVIVR-GIGRRAIAAFEAMGVKVIKGASGTVEEVVNQYLSGQ 119 (136)
T ss_dssp CHHHHHHHTTCSEEECS-CCCHHHHHHHHHTTCEEECSCCSBHHHHHHHHHTTC
T ss_pred HHHHHHHHCCCCEEEEC-CCCHHHHHHHHHCCCEEEecCCCCHHHHHHHHHhCC
Confidence 34667778899999997 799999999999999999877755556666665555
No 128
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=69.42 E-value=1.6 Score=31.29 Aligned_cols=33 Identities=24% Similarity=0.559 Sum_probs=24.0
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|.+|+.. |-....-.+|+..|+-+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~k~ 40 (46)
T 2ep2_A 8 TGEKPYECSICGKS--FTKKSQLHVHQQIHTGEKP 40 (46)
T ss_dssp SCCCSEECSSSCCE--ESSHHHHHHHHHTTSSCCS
T ss_pred CCCcCcCCCCCCcc--cCCHHHHHHHHHHhCCCCC
Confidence 34578999999754 5556666789888876554
No 129
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=69.36 E-value=1.1 Score=40.02 Aligned_cols=41 Identities=17% Similarity=0.491 Sum_probs=29.2
Q ss_pred cceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCcccc
Q psy16434 39 NQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNEYKF 94 (745)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (745)
..+|+|.+|+.. |.....-.+|...| ..| |.|+.||..|..
T Consensus 72 ~~~~~C~~C~k~--f~~~~~l~~H~~~H--~~~-----------~~C~~C~k~f~~ 112 (129)
T 2wbt_A 72 ISQFVCPLCLMP--FSSSVSLKQHIRYT--EHT-----------KVCPVCKKEFTS 112 (129)
T ss_dssp HCSEECTTTCCE--ESSHHHHHHHHHHT--CCC-----------CBCTTTCCBCSS
T ss_pred CCCeECCCCCcc--cCCHhHHHHHHHHC--CCC-----------CCCCCCCcccCC
Confidence 568999999865 33444456788777 333 789999988764
No 130
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=69.06 E-value=1.7 Score=31.14 Aligned_cols=39 Identities=15% Similarity=0.302 Sum_probs=27.5
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccc
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLC 88 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (745)
+...+|+|.+|+.. |-....-.+|+..|+-+.| |.|+.|
T Consensus 8 ~~~~~~~C~~C~k~--f~~~~~L~~H~~~H~~~~~-----------~~C~~C 46 (46)
T 2en1_A 8 SGEKPFKCEECGKR--FTQNSQLHSHQRVHTGEKP-----------SGPSSG 46 (46)
T ss_dssp CCCCSEEETTTTEE--ESSHHHHHHHGGGGSCCCC-----------SCCCCC
T ss_pred CCCCCeeCCCCCcc--cCCHHHHHHHHHHcCCCCC-----------CCCCCC
Confidence 34578999999754 5555566789888876544 677776
No 131
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=69.02 E-value=1.5 Score=31.50 Aligned_cols=39 Identities=18% Similarity=0.279 Sum_probs=28.3
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccc
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLC 88 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (745)
+...+|+|.+|+.. |-....-.+|+..|+-+.| |.|+.|
T Consensus 8 ~~~~~~~C~~C~k~--f~~~~~L~~H~~~H~~~k~-----------~~C~~C 46 (46)
T 2en6_A 8 SGEKPYGCNECGKT--FSQKSILSAHQRTHTGEKP-----------SGPSSG 46 (46)
T ss_dssp CSSCCEEETTTTEE--ESSHHHHHHHHHHHSSCCC-----------SSSCCC
T ss_pred CCCcCeECCCCCcc--cCchHHHHHHHHHcCCCCC-----------CCCCCC
Confidence 45678999999753 5555666789988876554 677776
No 132
>2yx6_A Hypothetical protein PH0822; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=68.99 E-value=8.3 Score=34.53 Aligned_cols=53 Identities=21% Similarity=0.202 Sum_probs=42.4
Q ss_pred HHHHHHHHcCCcEEEeCCcccHHHHHHHHHcCCeEEEeCCHHHHHHHHHHhCCe
Q psy16434 646 EQIKAIADTGANVVVAGAKFGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNAT 699 (745)
Q Consensus 646 ~~V~~I~~~gvnVVl~~~~I~d~al~~L~k~gIl~ir~v~k~dLeRIaraTGA~ 699 (745)
...+.|.+.|+++|++. +|.+-+...|.++||-++.......-+-|.+...+.
T Consensus 54 ~~~~~L~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~v~eal~~~~~g~ 106 (121)
T 2yx6_A 54 DLPNFIKDHGAKIVLTY-GIGRRAIEYFNSLGISVVTGVYGRISDVIKAFIGGK 106 (121)
T ss_dssp HHHHHHHHTTCCEEECS-BCCHHHHHHHHHTTCEEECSBCSBHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEEC-CCCHhHHHHHHHCCCEEEECCCCCHHHHHHHHHcCC
Confidence 55777788999999998 799999999999999999876655555555555555
No 133
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=68.48 E-value=0.97 Score=32.71 Aligned_cols=39 Identities=23% Similarity=0.395 Sum_probs=28.7
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccc
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLC 88 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (745)
+...+|+|.+|+.. |-....-.+|+..|+.+.| |.|+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~~~-----------~~C~~C 46 (46)
T 2ytm_A 8 TGEKPYKCMECGKA--FGDNSSCTQHQRLHTGQRP-----------SGPSSG 46 (46)
T ss_dssp SSCCSSSBTTTTBC--CSSHHHHHHHHHHHHSCCC-----------CCCCCC
T ss_pred CCCCCcCCCCCCch--hCCHHHHHHHHHHcCCCCC-----------CCCCCC
Confidence 44578999999764 5556666789999887655 667766
No 134
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=68.46 E-value=1.6 Score=31.30 Aligned_cols=33 Identities=21% Similarity=0.465 Sum_probs=24.4
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|..|+.. |-....-.+|+..|+.+.|
T Consensus 8 ~~~~~~~C~~C~k~--f~~~~~L~~H~~~H~~~~~ 40 (46)
T 2ytk_A 8 SGEKPYKCNECGKV--FTQNSHLTNHWRIHTGEKP 40 (46)
T ss_dssp SSSCSEECSSSCCE--ESSHHHHHHHHHHHSSSSC
T ss_pred CCCCCEeCCcCCCc--cCCHHHHHHHHHHHCCCCC
Confidence 34678999999764 5555566789999987665
No 135
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=68.31 E-value=1.7 Score=30.93 Aligned_cols=39 Identities=15% Similarity=0.265 Sum_probs=28.2
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccc
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLC 88 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (745)
+...+|+|..|+.. |-....-.+|+..|+.+.| |.|+.|
T Consensus 6 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~~~-----------~~C~~C 44 (44)
T 2emx_A 6 SGEKPFGCSCCEKA--FSSKSYLLVHQQTHAEEKP-----------SGPSSG 44 (44)
T ss_dssp SSCCCEECSSSSCE--ESSHHHHHHHHHHHTSSCS-----------CSCCCC
T ss_pred CCCcCccCCCCCcc--cCCHHHHHHHHHHhCCCCC-----------CCCCCC
Confidence 34578999999754 5555666789988886655 667766
No 136
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=68.23 E-value=1.7 Score=31.14 Aligned_cols=39 Identities=21% Similarity=0.291 Sum_probs=28.0
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccc
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLC 88 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (745)
+...+|+|.+|+.. |-....-.+|+..|+-+.| |.|+.|
T Consensus 8 ~~~k~~~C~~C~k~--F~~~~~L~~H~~~H~~~k~-----------~~C~~C 46 (46)
T 2emy_A 8 TGENPYECHECGKA--FSRKYQLISHQRTHAGEKP-----------SGPSSG 46 (46)
T ss_dssp CSSCCEECSSSCCE--ESSHHHHHHHHHHHTTSCC-----------SCSSCC
T ss_pred CCCcCcCCCCCCcc--cCcHHHHHHHHHHcCCCCC-----------CCCCCC
Confidence 44678999999764 4455556789888876654 677766
No 137
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=68.15 E-value=1.4 Score=31.61 Aligned_cols=39 Identities=21% Similarity=0.228 Sum_probs=28.1
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccc
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLC 88 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (745)
+...+|+|.+|+.. |-....-.+|+..|+-+.| |.|+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~k~-----------~~C~~C 46 (46)
T 2emp_A 8 TGVKPYMCNECGKA--FSVYSSLTTHQVIHTGEKP-----------SGPSSG 46 (46)
T ss_dssp SCCCSEECSSSCCE--ESCHHHHHHHHHHHHCCSC-----------CSCCCC
T ss_pred CCCcCeECCCCCch--hCCHHHHHHHHHHcCCCCC-----------CCCCCC
Confidence 44678999999764 5555566789988876554 667766
No 138
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=67.97 E-value=1.1 Score=32.15 Aligned_cols=39 Identities=26% Similarity=0.382 Sum_probs=28.3
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccc
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLC 88 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (745)
+...+|+|.+|+.. |-....-.+|+..|+-+.| |.|+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~~~-----------~~C~~C 46 (46)
T 2ytr_A 8 TGEKPYKCNECGKA--FSQTSKLARHQRIHTGEKP-----------SGPSSG 46 (46)
T ss_dssp SSCCTTCCTTTCCC--CSSHHHHHHHHTTTTTCSC-----------CCSCCC
T ss_pred CCCcCcCCCCCCCc--cCCHHHHHHHHHhcCCCCC-----------CCCCCC
Confidence 34578999999864 5555666789888876654 677776
No 139
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=67.91 E-value=1.5 Score=31.43 Aligned_cols=39 Identities=18% Similarity=0.169 Sum_probs=27.8
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccc
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLC 88 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (745)
+...+|+|.+|+.. |-....-.+|...|+-+.| |.|..|
T Consensus 8 ~~~~~~~C~~C~k~--f~~~~~L~~H~~~H~~~k~-----------~~C~~C 46 (46)
T 2yso_A 8 SREKSHQCRECGEI--FFQYVSLIEHQVLHMGQKN-----------SGPSSG 46 (46)
T ss_dssp SCCCCEECTTTCCE--ESSHHHHHHHHHHHSCCSC-----------CCTTCC
T ss_pred CCCCCEEccccChh--hCCHHHHHHHHHHhCCCCC-----------CCCCCC
Confidence 34578999999764 4455556789888876554 667766
No 140
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=67.91 E-value=1.6 Score=31.39 Aligned_cols=39 Identities=26% Similarity=0.334 Sum_probs=28.2
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccc
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLC 88 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (745)
+...+|+|..|+.. |-....-.+|+..|+-+.| |.|+.|
T Consensus 8 ~~~k~~~C~~C~k~--F~~~~~L~~H~~~H~~~k~-----------~~C~~C 46 (46)
T 2ytn_A 8 TGKKPYKCNECGKV--FTQNSHLARHRGIHTGEKP-----------SGPSSG 46 (46)
T ss_dssp SCCSSCBCTTTCCB--CSSHHHHHHHGGGTSCCCC-----------CSCCCC
T ss_pred CCCcCeECCCCCCe--eCCHHHHHHHhhhcCCCCC-----------CCCCCC
Confidence 44678999999754 5555566789988876655 677766
No 141
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=67.84 E-value=1.3 Score=31.88 Aligned_cols=39 Identities=18% Similarity=0.290 Sum_probs=28.0
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccc
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLC 88 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (745)
+...+|+|.+|+.. |-....-.+|+..|+-+.| |.|+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~k~-----------~~C~~C 46 (46)
T 2ely_A 8 TGEKPFKCVECGKG--FSRRSALNVHHKLHTGEKP-----------SGPSSG 46 (46)
T ss_dssp CCCCSBCCSSSCCC--BSSTTHHHHHHHHHSCCSS-----------CSCCCC
T ss_pred CCCCCcccCccCcc--cCCHHHHHHHHHHcCCCCC-----------CCCCCC
Confidence 44578999999764 5555556789988876554 677776
No 142
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=67.53 E-value=1.4 Score=31.53 Aligned_cols=39 Identities=18% Similarity=0.163 Sum_probs=27.6
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccc
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLC 88 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (745)
+...+|+|.+|+.. |-....-.+|+..|+-+.| |.|+.|
T Consensus 8 ~~~~~~~C~~C~k~--f~~~~~L~~H~~~H~~~k~-----------~~C~~C 46 (46)
T 2eop_A 8 TGEKPHECRECGKS--FSFNSQLIVHQRIHTGENP-----------SGPSSG 46 (46)
T ss_dssp CCCCSCBCTTTCCB--CSSHHHHHHHHTTTTTSCC-----------SCCCCC
T ss_pred CCCCCeeCCCCCch--hCCHHHHHHHHHHcCCCCC-----------CCCCCC
Confidence 44578999999754 5555566789888876554 667766
No 143
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=67.46 E-value=0.88 Score=32.86 Aligned_cols=39 Identities=21% Similarity=0.295 Sum_probs=28.2
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccc
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLC 88 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (745)
+...+|+|.+|+.. |.....-.+|+..|+-+.| |.|+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~k~-----------~~C~~C 46 (46)
T 2ytt_A 8 EGEKPYQCSECGKS--FSGSYRLTQHWITHTREKP-----------SGPSSG 46 (46)
T ss_dssp SCCCTTCCSSSCCC--CSSHHHHHHHHTHHHHCCC-----------CSCCCC
T ss_pred CCCCCeeCCCCCcc--cCCHHHHHHHHHHcCCCCC-----------CCCCCC
Confidence 34678999999754 5555566789988886654 677776
No 144
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=67.32 E-value=1.6 Score=31.30 Aligned_cols=39 Identities=26% Similarity=0.329 Sum_probs=27.8
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccc
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLC 88 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (745)
+...+|+|.+|+.. |-....-.+|+..|+-+.| |.|+.|
T Consensus 8 ~~~k~~~C~~C~k~--F~~~~~L~~H~~~H~~~k~-----------~~C~~c 46 (46)
T 2eq0_A 8 TGEKPYKCHECGKV--FRRNSHLARHQLIHTGEKP-----------SGPSSG 46 (46)
T ss_dssp TCCCCEECTTTCCE--ESSHHHHHHHHTTTCCCCC-----------SCCSCC
T ss_pred CCCCCeECCCCCch--hCCHHHHHHHHHHcCCCCC-----------CCCCCC
Confidence 34678999999764 5555666789888876554 667766
No 145
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=66.18 E-value=1.8 Score=39.72 Aligned_cols=45 Identities=27% Similarity=0.725 Sum_probs=27.7
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCcccc
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNEYKF 94 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (745)
+...+|+|.+|+.. |-....-.+|+..|..+.| |.|+.||..|..
T Consensus 18 ~Gek~y~C~~C~k~--F~~~~~L~~H~~~H~~~k~-----------~~C~~C~k~F~~ 62 (133)
T 2lt7_A 18 DGRVYYICIVCKRS--YVCLTSLRRHFNIHSWEKK-----------YPCRYCEKVFPL 62 (133)
T ss_dssp TTEEEEEETTTCCE--ESCHHHHHHHHHHHHCCSC-----------EECSSSSCEESS
T ss_pred CCCcCeECCCCCCC--cCCHHHHHHHHHHcCCCCC-----------eeCCccCeeccc
Confidence 34456788888643 4444555677777765443 667777766543
No 146
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=65.62 E-value=1.8 Score=30.94 Aligned_cols=39 Identities=13% Similarity=0.091 Sum_probs=27.1
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccc
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLC 88 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (745)
+...+|+|.+|+.. |-....-.+|+..|+-+.| |.|+.|
T Consensus 8 ~~~~~~~C~~C~k~--f~~~~~L~~H~~~H~~~k~-----------~~C~~C 46 (46)
T 2en8_A 8 SGEKSHTCDECGKN--FCYISALRIHQRVHMGEKC-----------SGPSSG 46 (46)
T ss_dssp CCCSSEECTTTCCE--ESSHHHHHHHHTTTCCSCS-----------SCCSCC
T ss_pred CCCCCeECCCcCcc--cCCHHHHHHHHHHhCCCCC-----------CCCCCC
Confidence 34578999999754 4445555688888875544 667776
No 147
>2wfb_A Putative uncharacterized protein ORP; mixed molybdenum-copper sulphide cluster, alpha and beta protein, biosynthetic protein; 2.00A {Desulfovibrio gigas}
Probab=65.59 E-value=9.7 Score=34.02 Aligned_cols=53 Identities=17% Similarity=0.211 Sum_probs=41.0
Q ss_pred HHHHHHHHcCCcEEEeCCcccHHHHHHHHHcCCeEEEeCCH-HHHHHHHHHhCCe
Q psy16434 646 EQIKAIADTGANVVVAGAKFGDMALHYLNKYGLMGVRLNSK-FDLRRLCKAVNAT 699 (745)
Q Consensus 646 ~~V~~I~~~gvnVVl~~~~I~d~al~~L~k~gIl~ir~v~k-~dLeRIaraTGA~ 699 (745)
...+.|.+.|+++|++. +|.+-+...|.++||-++..... ..-+-|.+...+.
T Consensus 58 ~~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~g~~i~eal~~~~~g~ 111 (120)
T 2wfb_A 58 NAAQVLAKSGAGVLLTG-YVGPKAFQALQAAGIKVGQDLEGLTVRQAVQRFLDGQ 111 (120)
T ss_dssp HHHHHHHHHTEEEEECS-CCCHHHHHHHHHTTCEEECCCTTSBHHHHHHHHHTTC
T ss_pred HHHHHHHHCCCCEEEEC-CCCHhHHHHHHHCCCEEEEcCCCCcHHHHHHHHHcCC
Confidence 45677778999999998 69999999999999999997665 4444454444443
No 148
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=64.96 E-value=2.4 Score=35.52 Aligned_cols=44 Identities=27% Similarity=0.636 Sum_probs=32.5
Q ss_pred ccceeeEe--eecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCcccc
Q psy16434 38 RNQTYQCL--VCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNEYKF 94 (745)
Q Consensus 38 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (745)
...+|+|. .|.. .|.....-.+|+..|+.+.| |.|..||..|..
T Consensus 42 ~~~~~~C~~~~C~~--~f~~~~~l~~H~~~h~~~~~-----------~~C~~C~~~f~~ 87 (100)
T 2ebt_A 42 GEKPYKCTWEGCDW--RFARSDELTRHYRKHTGAKP-----------FQCGVCNRSFSR 87 (100)
T ss_dssp CCCCEECCSSSCCC--EESSHHHHHHHHHHHTSCCS-----------CBCSSSCCBCSS
T ss_pred CCCCeeCCCCCCCC--ccCCHHHHHHHHHHhCCCCC-----------eECCCCcCccCC
Confidence 45789996 6865 35566666789988887654 889999987754
No 149
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=64.93 E-value=1.9 Score=30.97 Aligned_cols=39 Identities=18% Similarity=0.267 Sum_probs=27.4
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccc
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLC 88 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (745)
+...+|+|.+|+.. |-....-.+|+..|+-+.| |.|+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~k~-----------~~C~~C 46 (46)
T 2ytq_A 8 AGEKPYGCSECGKA--FSSKSYLIIHMRTHSGEKP-----------SGPSSG 46 (46)
T ss_dssp SCCCSCBCSSSCCB--CSCHHHHHHHHTTTCCSCS-----------SCCCCC
T ss_pred CCCCCcCCCccChh--hCChHHHHHHHHHhCCCCC-----------CCCCCC
Confidence 44678999999764 5555566788888765543 667776
No 150
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=64.45 E-value=1.1 Score=38.58 Aligned_cols=42 Identities=17% Similarity=0.308 Sum_probs=23.8
Q ss_pred ceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCcccce
Q psy16434 40 QTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNEYKFR 95 (745)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (745)
.+|+|.+|... |.....-.+|+ +|+.+. .|.|..||..|..+
T Consensus 41 ~~~~C~~C~~~--f~~~~~l~~H~-~H~~~~-----------~~~C~~C~~~f~~~ 82 (107)
T 1wjp_A 41 NAAVCPYCSLR--FFSPELKQEHE-SKCEYK-----------KLTCLECMRTFKSS 82 (107)
T ss_dssp HSBCCTTTCCC--BSSHHHHHHHH-HHCSTG-----------GGEEGGGTEECSSH
T ss_pred CCccCCCCCCc--cCCHHHHHHHH-HcCCCC-----------CccCccccchhCCH
Confidence 35777777643 22333345666 454433 27788888766543
No 151
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=64.19 E-value=2.1 Score=30.69 Aligned_cols=39 Identities=23% Similarity=0.357 Sum_probs=27.6
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhh-hccCCCCCCCceEEeecchhhccc
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVE-RHHWDQPDKNSLFVISDRFLCNLC 88 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 88 (745)
+...+|+|.+|+.. |-....-.+|+. .|..+.| |.|+.|
T Consensus 8 ~~~k~~~C~~C~k~--F~~~~~L~~H~~~~H~~~k~-----------~~C~~C 47 (47)
T 2epx_A 8 TGKKPYECIECGKA--FIQNTSLIRHWRYYHTGEKP-----------SGPSSG 47 (47)
T ss_dssp CCCCSBCCSSSCCC--BSSHHHHHHHHTTTTTTSCS-----------SSCCCC
T ss_pred CCCCCEECCccCch--hCChHHHHHHhHhhcCCCCC-----------CCCCCC
Confidence 34578999999764 555556678988 7876554 677776
No 152
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=64.18 E-value=2.3 Score=30.50 Aligned_cols=39 Identities=21% Similarity=0.297 Sum_probs=27.7
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccc
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLC 88 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (745)
+...+|+|.+|+.. |-....-.+|+..|+-+.| |.|+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~~~-----------~~C~~C 46 (46)
T 2ytd_A 8 SGEKPYKCSECGKA--FHRHTHLNEHRRIHTGYRP-----------SGPSSG 46 (46)
T ss_dssp CCCCSEECSSSCCE--ESSHHHHHHHHHHHTCCCS-----------SCSSCC
T ss_pred CCCcCeECCCCCCe--eCChHHHHHHHHHcCCCCC-----------CCCCCC
Confidence 34578999999764 5555666789888876544 667776
No 153
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=63.78 E-value=2 Score=35.21 Aligned_cols=42 Identities=29% Similarity=0.746 Sum_probs=31.5
Q ss_pred ceeeEee--ecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCcccc
Q psy16434 40 QTYQCLV--CKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNEYKF 94 (745)
Q Consensus 40 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (745)
.+|+|.+ |+.. |.....-.+|+..|+...| |.|..||..|.-
T Consensus 3 k~~~C~~~~C~~~--f~~~~~l~~H~~~h~~~~~-----------~~C~~C~~~f~~ 46 (90)
T 1a1h_A 3 RPYACPVESCDRR--FSQSGSLTRHIRIHTGQKP-----------FQCRICMRNFSR 46 (90)
T ss_dssp CCEECCSSSCCCE--ESSHHHHHHHHHHHHCCCC-----------EECTTTCCEESC
T ss_pred CceECCCCCCCCc--cCCHHHHHHHHHHhCCCCC-----------ccCCCCCcccCC
Confidence 5799984 9754 5566666789988876543 889999987754
No 154
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=63.74 E-value=1.4 Score=41.93 Aligned_cols=42 Identities=24% Similarity=0.623 Sum_probs=22.5
Q ss_pred ceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCcccc
Q psy16434 40 QTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNEYKF 94 (745)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (745)
.+|+|.+|+.. |-....-.+|+..|+.+.| |.|..||..|..
T Consensus 132 ~~~~C~~C~~~--f~~~~~L~~H~~~H~~~~~-----------~~C~~C~~~f~~ 173 (190)
T 2i13_A 132 KPYKCPECGKS--FSREDNLHTHQRTHTGEKP-----------YKCPECGKSFSR 173 (190)
T ss_dssp CCEECTTTCCE--ESCHHHHHHHHHHHHCCCC-----------EECTTTCCEESS
T ss_pred CCeECCCCCcc--cCCHHHHHHHHHhcCCCCC-----------eECCCCCCccCC
Confidence 45666666542 3333344556666654433 667777765543
No 155
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=63.22 E-value=1.8 Score=31.11 Aligned_cols=33 Identities=30% Similarity=0.604 Sum_probs=24.1
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|.+|+.. |-....-.+|+..|+-+.|
T Consensus 8 ~~~k~~~C~~C~k~--F~~~~~L~~H~~~H~~~k~ 40 (46)
T 2emh_A 8 TGERPYICTVCGKA--FTDRSNLIKHQKIHTGEKP 40 (46)
T ss_dssp SCCCSEECTTTCCE--ESSHHHHHHHHHHHHCSSC
T ss_pred CCCCCcCCCCCCch--hCCHHHHHHHHHhcCCCCC
Confidence 34578999999754 5555666789988886655
No 156
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=63.15 E-value=2.6 Score=30.14 Aligned_cols=33 Identities=27% Similarity=0.542 Sum_probs=23.9
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|..|+.. |-....-.+|+..|+-+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~~~ 40 (46)
T 2ep3_A 8 TGEKPYRCAECGKA--FTDRSNLFTHQKIHTGEKP 40 (46)
T ss_dssp SCCCSEECSSSCCE--ESSHHHHHHHHTTTTTSCC
T ss_pred CCCCCeECCCCCch--hCCHHHHHHHHHHcCCCCC
Confidence 34678999999764 5555666789888876554
No 157
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=62.78 E-value=3.4 Score=35.75 Aligned_cols=48 Identities=21% Similarity=0.323 Sum_probs=31.7
Q ss_pred eeccceeeEeeecCcchhhhhhhhhhhhhh--ccCCCCCCCceEEeecchhhccccCcccce
Q psy16434 36 FTRNQTYQCLVCKNKTLFHDLAEGARHVER--HHWDQPDKNSLFVISDRFLCNLCGNEYKFR 95 (745)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (745)
-+...+|+|.+|+.. |.....-.+|+.. |+.+.|. +.|..||..|.|.
T Consensus 14 H~~~~~~~C~~C~k~--f~~~~~L~~H~~~~~h~~~~~~----------~~C~~C~~~f~f~ 63 (115)
T 2dmi_A 14 FTGASKFRCKDCSAA--YDTLVELTVHMNETGHYRDDNH----------ETDNNNPKRWSKP 63 (115)
T ss_dssp CCCCCSEEBSSSSCE--ESSHHHHHHHHHHTCCCBCSCC----------CCCCCCCSCCSSC
T ss_pred eCCCCCEECCccCch--hcCHHHHHHHHHHhCccccCCC----------ccCCCCCcccccc
Confidence 345678999999753 5555666778876 5443331 3499999887543
No 158
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=61.79 E-value=2 Score=39.38 Aligned_cols=26 Identities=23% Similarity=0.478 Sum_probs=12.5
Q ss_pred ceeeEeeecCcchhhhhhhhhhhhhhcc
Q psy16434 40 QTYQCLVCKNKTLFHDLAEGARHVERHH 67 (745)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (745)
.+|+|..|+.. |.....-.+|+..|.
T Consensus 49 k~~~C~~C~k~--F~~~~~L~~H~~~H~ 74 (133)
T 2lt7_A 49 KKYPCRYCEKV--FPLAEYRTKHEIHHT 74 (133)
T ss_dssp SCEECSSSSCE--ESSHHHHHHHHHHHH
T ss_pred CCeeCCccCee--cccccchhhhccccC
Confidence 45666666532 333333445555543
No 159
>1rdu_A Conserved hypothetical protein; atnos, candid, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; NMR {Thermotoga maritima} SCOP: c.55.5.1
Probab=61.63 E-value=8.9 Score=33.99 Aligned_cols=52 Identities=13% Similarity=0.205 Sum_probs=41.3
Q ss_pred HHHHHHHcCCcEEEeCCcccHHHHHHHHHcCCeEEEeCCHHHHHHHHHHhCCe
Q psy16434 647 QIKAIADTGANVVVAGAKFGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNAT 699 (745)
Q Consensus 647 ~V~~I~~~gvnVVl~~~~I~d~al~~L~k~gIl~ir~v~k~dLeRIaraTGA~ 699 (745)
..+.+.+.|+++|++. +|.+-+...|.++||-++.......-+-|.+...+.
T Consensus 54 ~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~i~eal~~~~~g~ 105 (116)
T 1rdu_A 54 VVQSLVSKGVEYLIAS-NVGRNAFETLKAAGVKVYRFEGGTVQEAIDAFSEGR 105 (116)
T ss_dssp HHHHHHTTTCCEEECS-SCCSSCHHHHHTTTCEEECCCSCBHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCEEEEC-CCCHhHHHHHHHCCCEEEECCCCCHHHHHHHHHhCC
Confidence 4566778999999998 599999999999999999976655555565555555
No 160
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.59 E-value=2.2 Score=28.87 Aligned_cols=33 Identities=21% Similarity=0.504 Sum_probs=24.3
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|.+|+.. |-....-.+|+..|+...|
T Consensus 5 ~~~k~~~C~~C~k~--f~~~~~l~~H~~~h~~~kp 37 (37)
T 2elo_A 5 SSGRSYSCPVCEKS--FSEDRLIKSHIKTNHPEVS 37 (37)
T ss_dssp CCCCCCEETTTTEE--CSSHHHHHHHHHHHCSSCC
T ss_pred CCCCCcCCCCCCCc--cCCHHHHHHHHHHHcCCCC
Confidence 34578999999764 5555666789999987665
No 161
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=61.19 E-value=1.7 Score=37.31 Aligned_cols=44 Identities=23% Similarity=0.517 Sum_probs=32.8
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCcccce
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNEYKFR 95 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (745)
+...+|+|.+|... |.....-.+|+..|. ..|.|..||..|...
T Consensus 12 ~~~~~~~C~~C~~~--f~~~~~l~~H~~~H~-------------~~~~C~~C~~~f~~~ 55 (107)
T 1wjp_A 12 ENKEVYQCRLCNAK--LSSLLEQGSHERLCR-------------NAAVCPYCSLRFFSP 55 (107)
T ss_dssp CCCCCCBCTTTCCB--CSSHHHHHHHHHHHH-------------HSBCCTTTCCCBSSH
T ss_pred CCCcCeECCCCCCc--cCCHHHHHHHHHHCC-------------CCccCCCCCCccCCH
Confidence 45678999999764 555566678888873 258999999987643
No 162
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=60.85 E-value=1.6 Score=33.37 Aligned_cols=37 Identities=38% Similarity=0.694 Sum_probs=25.7
Q ss_pred ceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCc
Q psy16434 40 QTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNE 91 (745)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (745)
+.|+|.+|+. -+|-++|-. ..|+. +.|.+.|+.||-.
T Consensus 3 ~~y~C~vCGy---vyd~~~Gd~----t~f~~--------lP~dw~CP~Cg~~ 39 (46)
T 6rxn_A 3 QKYVCNVCGY---EYDPAEHDN----VPFDQ--------LPDDWCCPVCGVS 39 (46)
T ss_dssp CCEEETTTCC---EECGGGGTT----CCGGG--------SCTTCBCTTTCCB
T ss_pred CEEECCCCCe---EEeCCcCCC----cchhh--------CCCCCcCcCCCCc
Confidence 5799999983 466666654 34443 2456899999975
No 163
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=59.59 E-value=1.8 Score=37.55 Aligned_cols=44 Identities=7% Similarity=-0.011 Sum_probs=30.1
Q ss_pred eeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCcccce
Q psy16434 41 TYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNEYKFR 95 (745)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (745)
.|+|.+|+..--|-....-.+|+..|+-+.| |.|..||..|..+
T Consensus 50 ~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~-----------~~C~~C~k~f~~~ 93 (115)
T 2dmi_A 50 HETDNNNPKRWSKPRKRSLLEMEGKEDAQKV-----------LKCMYCGHSFESL 93 (115)
T ss_dssp CCCCCCCCSCCSSCCCCCCCCCCCSCCCCSS-----------CBCSSSCCBCSSH
T ss_pred CccCCCCCcccccccHHHHHHHhhccCCCcc-----------eECCCCCCccCCH
Confidence 4569999865434444455678777775544 8899999887644
No 164
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=58.60 E-value=3.5 Score=27.23 Aligned_cols=32 Identities=22% Similarity=0.395 Sum_probs=23.1
Q ss_pred ccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 38 RNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
...+|+|..|+.. |-....-.+|+..|+.+.|
T Consensus 4 ~~k~~~C~~C~k~--f~~~~~L~~H~~~h~~~kp 35 (35)
T 2elx_A 4 GSSGYVCALCLKK--FVSSIRLRSHIREVHGAAQ 35 (35)
T ss_dssp CCCSEECSSSCCE--ESSHHHHHHHHHHTSCTTC
T ss_pred CCCCeECCCCcch--hCCHHHHHHHHHHHcCCCC
Confidence 4568999999764 4444555789888887654
No 165
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.14 E-value=2.9 Score=29.98 Aligned_cols=33 Identities=21% Similarity=0.517 Sum_probs=23.6
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|..|+.. |-....-.+|+..|+-+.|
T Consensus 8 ~~~k~~~C~~C~k~--F~~~~~L~~H~~~H~~~k~ 40 (46)
T 2eoo_A 8 SGERPYGCNECGKN--FGRHSHLIEHLKRHFREKS 40 (46)
T ss_dssp SCCCCEECSSSCCE--ESSHHHHHHHHHHHHSTTS
T ss_pred CCCCCEEccccCcc--cCCHHHHHHHHHHHcCCCC
Confidence 44678999999764 4455556789888876544
No 166
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=57.66 E-value=2.3 Score=26.71 Aligned_cols=29 Identities=28% Similarity=0.519 Sum_probs=21.3
Q ss_pred eeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 41 TYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+|+|..|+.. |.....-.+|+..|+.+.|
T Consensus 2 ~~~C~~C~k~--f~~~~~l~~H~~~h~~~~~ 30 (30)
T 1klr_A 2 TYQCQYCEFR--SADSSNLKTHIKTKHSKEK 30 (30)
T ss_dssp CCCCSSSSCC--CSCSHHHHHHHHHHTSSCC
T ss_pred CccCCCCCCc--cCCHHHHHHHHHHHccCCC
Confidence 6999999764 4455566788888887654
No 167
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=57.03 E-value=1 Score=37.44 Aligned_cols=43 Identities=21% Similarity=0.329 Sum_probs=33.2
Q ss_pred ccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCcccc
Q psy16434 38 RNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNEYKF 94 (745)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (745)
...+|+|..|+.. |.....-.+|+..||+ ..|.|..||..|..
T Consensus 28 ~~~~~~C~~C~k~--f~~~~~L~~H~~~h~~------------~~~~c~~C~~~f~~ 70 (88)
T 1llm_C 28 GEKPFACDICGRK--FARSDERKRHRDIQHI------------LPILEDKVEELLSK 70 (88)
T ss_dssp CCCCEECTTTCCE--ESSHHHHHHHHHHHTH------------HHHHHHHHHHHHHH
T ss_pred CCCCccCCCCCCc--cCCHHHHHHHHHHhCC------------CcchHHHHHHHHHH
Confidence 4568999999853 5555666789999994 46899999987654
No 168
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=56.48 E-value=3.1 Score=33.95 Aligned_cols=44 Identities=30% Similarity=0.616 Sum_probs=29.1
Q ss_pred ccceeeEe--eecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCcccc
Q psy16434 38 RNQTYQCL--VCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNEYKF 94 (745)
Q Consensus 38 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (745)
...+|+|. +|+.. |-....-.+|+..|+.+.| |.|..||..|..
T Consensus 32 ~~~~~~C~~~~C~~~--f~~~~~l~~H~~~h~~~~~-----------~~C~~C~~~f~~ 77 (89)
T 2wbs_A 32 GEKPYHCDWDGCGWK--FARSDELTRHYRKHTGHRP-----------FQCQKCDRAFSR 77 (89)
T ss_dssp SSCCEECCSTTTCCE--ESSHHHHHHHHHHHHCCCC-----------EECSSSSCEESS
T ss_pred CCCCcCCCCCCCCCc--cCCHHHHHHHHHHcCCCCC-----------ccCCCCCcccCC
Confidence 34678886 58653 4344455678877776543 789999987654
No 169
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.17 E-value=3.8 Score=29.32 Aligned_cols=33 Identities=21% Similarity=0.507 Sum_probs=23.5
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|.+|... |-....-.+|+..|+-+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~k~ 40 (46)
T 2em2_A 8 SGEKPFKCKECGKA--FRQNIHLASHLRIHTGEKP 40 (46)
T ss_dssp CCCCSEECSSSCCE--ESSHHHHHHHHHHHCCCCS
T ss_pred CCCCCEECCcCCch--hCCHHHHHHHHHHhCCCCC
Confidence 45678999999764 4445556789888876554
No 170
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=54.18 E-value=4.2 Score=31.92 Aligned_cols=36 Identities=14% Similarity=0.394 Sum_probs=28.0
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKN 74 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (745)
+...+|+|.+|... |.....-.+|+..||.+.|...
T Consensus 33 ~~~~~~~C~~C~~~--f~~~~~L~~H~~~h~~~~p~p~ 68 (70)
T 1x5w_A 33 CTDRPFKCNYCSFD--TKQPSNLSKHMKKFHGDMSGPS 68 (70)
T ss_dssp CCSCSEECSSSSCE--ESSHHHHHHHHHHHHSSSCCSS
T ss_pred CCCCCEeCCCCCCc--cCCHHHHHHHHHHHhCCCCCCC
Confidence 34578999999864 5566667899999999988654
No 171
>2re2_A Uncharacterized protein TA1041; dinitrogenase iron-molybdenum cofactor, structural genomics, center for structural genomics; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728}
Probab=53.09 E-value=20 Score=32.96 Aligned_cols=52 Identities=15% Similarity=0.171 Sum_probs=39.7
Q ss_pred HHHHHHHHcCCcEEEeCCcccHHHHHHHHHcCCeEEEeCCHHHHHHHHHHhCCe
Q psy16434 646 EQIKAIADTGANVVVAGAKFGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNAT 699 (745)
Q Consensus 646 ~~V~~I~~~gvnVVl~~~~I~d~al~~L~k~gIl~ir~v~k~dLeRIaraTGA~ 699 (745)
...+.|.+.|+++||+. +|.+-|...|.+ ||-++.-.....-+.|.+...+.
T Consensus 70 ~~~~~L~~~gv~~VI~g-~iG~~a~~~L~~-GI~v~~~~~~~veeal~~~~~G~ 121 (136)
T 2re2_A 70 FMLKSALDHGANALVLS-EIGSPGFNFIKN-KMDVYIVPEMPVADALKLILEGK 121 (136)
T ss_dssp HHHHHHHHTTCSEEEES-CCBHHHHHHHTT-TSEEEECCSCBHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEEC-CCCHhHHHHHHC-CCEEEEcCCCCHHHHHHHHHhCC
Confidence 45666777899999997 799999999999 99999986634444445445444
No 172
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=52.94 E-value=3.4 Score=35.68 Aligned_cols=44 Identities=30% Similarity=0.614 Sum_probs=28.4
Q ss_pred ccceeeEe--eecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCcccc
Q psy16434 38 RNQTYQCL--VCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNEYKF 94 (745)
Q Consensus 38 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (745)
...+|+|. .|+. .|.....-.+|+..|+...| |.|..||..|.-
T Consensus 33 ~~~~~~C~~~~C~~--~f~~~~~l~~H~~~h~~~~~-----------~~C~~C~~~f~~ 78 (119)
T 2jp9_A 33 GEKPYQCDFKDCER--RFSRSDQLKRHQRRHTGVKP-----------FQCKTCQRKFSR 78 (119)
T ss_dssp TTCCEECCSTTCCC--EESSHHHHHHHHHHHHCCCC-----------EECTTTCCEESC
T ss_pred CCCCccCCCCCCcC--ccCCHHHHHHHHHHcCCCCC-----------ccCCccCchhCC
Confidence 34678887 5764 35555566677777775443 678888876643
No 173
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=51.96 E-value=4.2 Score=25.45 Aligned_cols=28 Identities=39% Similarity=0.726 Sum_probs=20.8
Q ss_pred ceeeEeeecCcchhhhhhhhhhhhhhccCC
Q psy16434 40 QTYQCLVCKNKTLFHDLAEGARHVERHHWD 69 (745)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (745)
.+|+|..|+.. |.....-.+|+..|+.+
T Consensus 2 k~~~C~~C~~~--f~~~~~l~~H~~~h~~~ 29 (30)
T 2m0d_A 2 KPYQCDYCGRS--FSDPTSKMRHLETHDTD 29 (30)
T ss_dssp CCEECTTTCCE--ESCHHHHHHHHHTTCCC
T ss_pred cCccCCCCCcc--cCCHHHHHHHHHHhccC
Confidence 57999999864 55556667888888754
No 174
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=51.71 E-value=3.2 Score=39.37 Aligned_cols=42 Identities=29% Similarity=0.747 Sum_probs=25.6
Q ss_pred cceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCccc
Q psy16434 39 NQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNEYK 93 (745)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (745)
..+|+|..|+. .|-....-.+|+..|+-+.| |.|..||..|.
T Consensus 47 ~~~~~C~~C~~--~f~~~~~l~~H~~~h~~~~~-----------~~C~~C~~~f~ 88 (190)
T 2i13_A 47 EKPYKCPECGK--SFSDKKDLTRHQRTHTGEKP-----------YKCPECGKSFS 88 (190)
T ss_dssp -CCEECTTTCC--EESSHHHHHHHHHHHHCCCC-----------EECTTTCCEES
T ss_pred CCCccCCCcCc--hhCCHHHHHHHHHhcCCCCC-----------ccCcccCCccC
Confidence 45677777754 34445555667777765433 66777776654
No 175
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=50.94 E-value=5.8 Score=32.83 Aligned_cols=51 Identities=22% Similarity=0.346 Sum_probs=32.5
Q ss_pred eeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCcccce
Q psy16434 41 TYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNEYKFR 95 (745)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (745)
.|+|..|+.. |.....-.+|+..||...+..... ....|.|..||..|..+
T Consensus 25 ~~~C~~C~k~--f~~~~~L~~H~~~~H~~~~~~~~~--~c~~~~C~~C~k~f~~~ 75 (95)
T 2ej4_A 25 SRPKKSCDRT--FSTMHELVTHVTMEHVGGPEQNNH--VCYWEECPREGKSFKAK 75 (95)
T ss_dssp SSSCCCCCCC--CSSHHHHHHHHHHTTTCCTTCSCC--CCCCTTCSSTTCCCSSH
T ss_pred CCcccccccc--cCCHHHHHHHHHHhccCCCCCCcc--ceeccCCCCCCcccCCH
Confidence 4789999753 555556678998866554321111 12338999999987643
No 176
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=48.86 E-value=5.4 Score=31.37 Aligned_cols=45 Identities=20% Similarity=0.517 Sum_probs=32.0
Q ss_pred eccceeeEee--ecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhcc--ccCcccc
Q psy16434 37 TRNQTYQCLV--CKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNL--CGNEYKF 94 (745)
Q Consensus 37 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 94 (745)
++..+|+|.. |+.. |-....-.+|+..|+-+.| |.|.. ||..|..
T Consensus 13 ~~~~~~~C~~~~C~k~--f~~~~~L~~H~~~H~~~~~-----------~~C~~~~C~k~f~~ 61 (72)
T 2epa_A 13 SRIRSHICSHPGCGKT--YFKSSHLKAHTRTHTGEKP-----------FSCSWKGCERRFAR 61 (72)
T ss_dssp CCCCCEECSSTTTCCE--ESSHHHHHHHHHHHSSSCS-----------EECCCTTCCCEESS
T ss_pred cccCceeCCCCCCccc--cCCHHHHHHHHHhcCCCCC-----------ccCCCCCCCcccCC
Confidence 4557899988 9754 5455556689988876554 78965 9987654
No 177
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=47.78 E-value=5.7 Score=27.65 Aligned_cols=33 Identities=24% Similarity=0.553 Sum_probs=24.6
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|.+|+.. |-....-.+|+..|+.+.|
T Consensus 7 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~~~ 39 (42)
T 2eos_A 7 GGEKPYPCEICGTR--FRHLQTLKSHLRIHTGSGP 39 (42)
T ss_dssp SSSCCBCCSSSCCC--BSSHHHHHHHTTTTSCCSS
T ss_pred CCCCCEECCCCCCc--cCCHHHHHHHHHhcCCCCC
Confidence 44678999999764 5555666789988887665
No 178
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.99 E-value=9.3 Score=26.92 Aligned_cols=35 Identities=17% Similarity=0.184 Sum_probs=25.7
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDK 73 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (745)
+...+|+|.+|+.. |-....-.+|+..|+-+.|-+
T Consensus 8 ~~~k~~~C~~C~k~--F~~~~~L~~H~~~H~~~k~~~ 42 (44)
T 2epv_A 8 SGEKPYECNECGKA--FIWKSLLIVHERTHAGVSGPS 42 (44)
T ss_dssp CCCCSEECSSSCCE--ESSHHHHHHHHGGGSSCSCCC
T ss_pred CCCcCeECCCCCcc--cCchHHHHHHHhHhcCCCCCC
Confidence 34568999999764 555666678999988776643
No 179
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=46.49 E-value=4.8 Score=32.27 Aligned_cols=29 Identities=24% Similarity=0.453 Sum_probs=15.9
Q ss_pred ccceeeEee--ecCcchhhhhhhhhhhhhhccC
Q psy16434 38 RNQTYQCLV--CKNKTLFHDLAEGARHVERHHW 68 (745)
Q Consensus 38 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 68 (745)
..++|+|.. |+.. |-....-.+|+..|+-
T Consensus 28 ~~~~~~C~~~~C~~~--f~~~~~l~~H~~~h~~ 58 (85)
T 2j7j_A 28 QQLPYECPHEGCDKR--FSLPSRLKRHEKVHAG 58 (85)
T ss_dssp TTCCEECCSTTCCCE--ESSHHHHHHHHHHHHS
T ss_pred CCCCeeCCCCCCcCc--cCCHHHHHHHHHHhCC
Confidence 345677766 7532 3444444566666653
No 180
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=45.93 E-value=6.6 Score=30.52 Aligned_cols=43 Identities=19% Similarity=0.269 Sum_probs=27.3
Q ss_pred ccceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhc-cccCcccce
Q psy16434 38 RNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCN-LCGNEYKFR 95 (745)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 95 (745)
...+|+|..|+..-. ...-.+|... +-. -.|.|+ .||..|..+
T Consensus 7 ~~~~~~C~~C~k~f~---~~~L~~H~~~-~~~-----------~p~~C~~~C~k~f~~~ 50 (66)
T 2eod_A 7 GKRTQPCTYCTKEFV---FDTIQSHQYQ-CPR-----------LPVACPNQCGVGTVAR 50 (66)
T ss_dssp CCCEEECSSSCCEEE---HHHHHHHHHH-CSS-----------SEEECTTCCSCCEEET
T ss_pred CCCCeeccccCCccC---HHHHHHHHHH-cCC-----------cCccCCcccCcccccH
Confidence 356899999976533 3444566554 221 138899 999876544
No 181
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=44.27 E-value=9.2 Score=26.36 Aligned_cols=32 Identities=22% Similarity=0.439 Sum_probs=23.2
Q ss_pred ccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 38 RNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
...+|+|..|+.. |-....-.+|+..|+.+.|
T Consensus 7 ~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~k~ 38 (41)
T 2ept_A 7 GQRVYECQECGKS--FRQKGSLTLHERIHTGSGP 38 (41)
T ss_dssp CCCCEECSSSCCE--ESSHHHHHHHGGGCCCCSC
T ss_pred CCCCeECCCCCCC--cCCHHHHHHHHHHhCCCCC
Confidence 4578999999764 4445555789888887665
No 182
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.65 E-value=6.8 Score=27.92 Aligned_cols=25 Identities=16% Similarity=0.462 Sum_probs=18.1
Q ss_pred hhhhhhccCCCCCCCceEEeecchhhccccCcccce
Q psy16434 60 ARHVERHHWDQPDKNSLFVISDRFLCNLCGNEYKFR 95 (745)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (745)
++|...|....| |.|+.||..|..+
T Consensus 1 ~~H~~~H~~~k~-----------~~C~~C~k~f~~~ 25 (46)
T 2em6_A 1 GSSGSSGMGEKC-----------YKCDVCGKEFSQS 25 (46)
T ss_dssp CCCCSCCCCCCC-----------CBCSSSCCBCSSH
T ss_pred CCCccccCCCCC-----------eECCCCCcccCCH
Confidence 367777765544 8899999987653
No 183
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=43.48 E-value=6.3 Score=33.88 Aligned_cols=44 Identities=18% Similarity=0.606 Sum_probs=33.6
Q ss_pred ccceeeEee--ecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhc--cccCcccc
Q psy16434 38 RNQTYQCLV--CKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCN--LCGNEYKF 94 (745)
Q Consensus 38 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 94 (745)
...+|+|.+ |+. .|.....-.+|+..|+.+.| |.|. .||..|.-
T Consensus 3 ~~~~~~C~~~~C~~--~f~~~~~l~~H~~~h~~~~~-----------~~C~~~~C~~~f~~ 50 (119)
T 2jp9_A 3 EKRPFMCAYPGCNK--RYFKLSHLQMHSRKHTGEKP-----------YQCDFKDCERRFSR 50 (119)
T ss_dssp SSCCBCCCSTTSCC--CBSCHHHHHHHHHHHHTTCC-----------EECCSTTCCCEESS
T ss_pred CCeeeeCCCCCCcc--hhCCHHHHHHHHHhhCCCCC-----------ccCCCCCCcCccCC
Confidence 456899997 975 36667777889999987654 8899 79987654
No 184
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.47 E-value=7.2 Score=27.83 Aligned_cols=33 Identities=27% Similarity=0.551 Sum_probs=24.2
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|.+|+.. |-....-.+|+..|+-+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~k~ 40 (46)
T 2eon_A 8 TGEKPYKCQVCGKA--FRVSSHLVQHHSVHSGERP 40 (46)
T ss_dssp SSCCSCBCSSSCCB--CSSHHHHHHHTTTTTSCCS
T ss_pred CCCcccCCCCCCcc--cCcHHHHHHHHHhcCCCCC
Confidence 44678999999764 5555666789888876655
No 185
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.02 E-value=9.6 Score=27.14 Aligned_cols=39 Identities=23% Similarity=0.284 Sum_probs=26.5
Q ss_pred eccceeeEe--eecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccc
Q psy16434 37 TRNQTYQCL--VCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLC 88 (745)
Q Consensus 37 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (745)
+...+|+|. .|... |.....-.+|+..|+-+.| |.|+.|
T Consensus 8 ~~~k~~~C~~~~C~k~--f~~~~~L~~H~~~H~~~k~-----------~~C~~C 48 (48)
T 2ent_A 8 TGEKPFACTWPGCGWR--FSRSDELSRHRRSHSGVKP-----------SGPSSG 48 (48)
T ss_dssp CCCCCEECCSSSCCCE--ESSHHHHHHHHTTSCCCCS-----------CSSCCC
T ss_pred CCCCCeECCCCCCCCc--cCCHHHHHHHHHHhCCCCC-----------CCCCCC
Confidence 346789998 89754 4445556788888765543 667766
No 186
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=42.85 E-value=8.2 Score=31.31 Aligned_cols=44 Identities=23% Similarity=0.557 Sum_probs=31.6
Q ss_pred ccceeeEee--ecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhc--cccCcccc
Q psy16434 38 RNQTYQCLV--CKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCN--LCGNEYKF 94 (745)
Q Consensus 38 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 94 (745)
++.+|+|.+ |+.. |.....-.+|+..|+...| |.|. .||..|.-
T Consensus 2 ~~~~~~C~~~~C~~~--f~~~~~l~~H~~~h~~~~~-----------~~C~~~~C~~~f~~ 49 (89)
T 2wbs_A 2 RTATHTCDYAGCGKT--YTKSSHLKAHLRTHTGEKP-----------YHCDWDGCGWKFAR 49 (89)
T ss_dssp -CCCEECCSTTTCCE--ESSHHHHHHHHTTSCSSCC-----------EECCSTTTCCEESS
T ss_pred CCCCeeCCCCCCCCc--CCCHHHHHHHHHhcCCCCC-----------cCCCCCCCCCccCC
Confidence 567899999 9753 4555566789988876543 7896 59987754
No 187
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=42.25 E-value=7.7 Score=26.52 Aligned_cols=32 Identities=25% Similarity=0.568 Sum_probs=22.6
Q ss_pred ccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 38 RNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
...+|+|.+|+.. |-....-.+|...|+.+.|
T Consensus 3 ~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~k~ 34 (39)
T 1njq_A 3 PPRSYTCSFCKRE--FRSAQALGGHMNVHRRDRA 34 (39)
T ss_dssp CSSSEECTTTCCE--ESSHHHHHHHHHTTCCSCT
T ss_pred CCCceECCCCCcc--cCCHHHHHHHHHHcCCCcc
Confidence 3568999999764 4444455688888887665
No 188
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=42.12 E-value=8.1 Score=33.59 Aligned_cols=42 Identities=26% Similarity=0.643 Sum_probs=24.3
Q ss_pred cceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhcc--ccCccc
Q psy16434 39 NQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNL--CGNEYK 93 (745)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 93 (745)
..+|+|.+|+.. |-....-.+|+..|+...| |.|.. ||..|.
T Consensus 32 ~~~~~C~~C~~~--f~~~~~l~~H~~~h~~~~~-----------~~C~~~~C~~~f~ 75 (124)
T 1ubd_C 32 PRVHVCAECGKA--FVESSKLKRHQLVHTGEKP-----------FQCTFEGCGKRFS 75 (124)
T ss_dssp CCCEECTTTCCE--ESSHHHHHHHGGGTSCCCC-----------EECCSTTCCCEES
T ss_pred CCCeECCCCCch--hCCHHHHHHHHHHcCCCCC-----------eeCCCCCCcCccC
Confidence 356777777643 4444455567777665433 56654 766553
No 189
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=42.12 E-value=9.8 Score=26.29 Aligned_cols=33 Identities=18% Similarity=0.395 Sum_probs=23.8
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|..|+.. |-....-.+|+..|+-+.|
T Consensus 6 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~~~ 38 (42)
T 2el5_A 6 SGENPYECSECGKA--FNRKDQLISHQRTHAGESG 38 (42)
T ss_dssp SSCCSEECSSSCCE--ESSHHHHHHHHGGGCCCCS
T ss_pred CCCCCccCCCcChh--hCCHHHHHHHHHhcCCCCC
Confidence 34578999999764 4455556789988876655
No 190
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=41.81 E-value=40 Score=34.79 Aligned_cols=52 Identities=10% Similarity=0.123 Sum_probs=41.8
Q ss_pred HHHHHHcCCcEEEeCCcccHHHHHHHHHcCCeEEEeCC--------------------------HHHHHHHHHHhCCe
Q psy16434 648 IKAIADTGANVVVAGAKFGDMALHYLNKYGLMGVRLNS--------------------------KFDLRRLCKAVNAT 699 (745)
Q Consensus 648 V~~I~~~gvnVVl~~~~I~d~al~~L~k~gIl~ir~v~--------------------------k~dLeRIaraTGA~ 699 (745)
+++|++++|||||..........+.|.+.||-++..-. .+.++.+++++|..
T Consensus 77 ~E~i~~l~PDlIi~~~~~~~~~~~~L~~~Gipvv~~~~~~~~~~~~~~~~pt~~~~~~~~~~~~~~~i~~lg~~lg~e 154 (326)
T 3psh_A 77 IESLLALKPDVVFVTNYAPSEMIKQISDVNIPVVAISLRTGEVGEKGKLNPTLTDEDKAYNDGLKQGIELIAEVFEKK 154 (326)
T ss_dssp HHHHHHTCCSEEEEETTCCHHHHHHHHTTTCCEEEECSCCSCGGGTTCSSCCCTTHHHHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHccCCCEEEEeCCCChHHHHHHHHcCCCEEEEeccccccccccccccccccccchhhhhHHHHHHHHHHHcCCH
Confidence 67888999999998766566778889999998886431 35789999999974
No 191
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.73 E-value=7.7 Score=26.78 Aligned_cols=33 Identities=21% Similarity=0.424 Sum_probs=24.4
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|.+|+.. |-....-.+|+..|+.+.|
T Consensus 7 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~~~ 39 (42)
T 2ytb_A 7 GGEKPYRCDQCGKA--FSQKGSLIVHIRVHTGSGP 39 (42)
T ss_dssp CSCCSBCCTTTTCC--BSSHHHHHTTGGGTSCCSC
T ss_pred CCCCCeeCCCccch--hCCHHHHHHHHHHhCCCCC
Confidence 34578999999764 5555566789988887766
No 192
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=41.63 E-value=9.2 Score=34.72 Aligned_cols=53 Identities=21% Similarity=0.319 Sum_probs=36.7
Q ss_pred cceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCcccce
Q psy16434 39 NQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNEYKFR 95 (745)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (745)
..+|+|..|+. .|.....-.+|+..||-..+..+.. ....|.|..||..|..+
T Consensus 23 ~~~~~C~~C~~--~f~~~~~L~~H~~~~H~~~~~~~~~--~~~~~~C~~C~~~f~~~ 75 (155)
T 2rpc_A 23 QLSRPKKSCDR--TFSTMHELVTHVTMEHVGGPEQNNH--VCYWEECPREGKSFKAK 75 (155)
T ss_dssp CCSSSCCCCCC--CBSSHHHHHHHHHTTTSCCTTCSSC--CCCBTTCTTSSCCCSSH
T ss_pred hcccccccCCc--ccCCHHHHHHHHHhhcCCCcccCCc--cccccCCCCcccccCCH
Confidence 45799999975 4777777889999877665433211 12347899999887543
No 193
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=40.78 E-value=8.5 Score=34.99 Aligned_cols=44 Identities=20% Similarity=0.563 Sum_probs=29.1
Q ss_pred cceeeEee--ecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhcc--ccCcccce
Q psy16434 39 NQTYQCLV--CKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNL--CGNEYKFR 95 (745)
Q Consensus 39 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 95 (745)
..+|+|.+ |... |.....-.+|+..|+...| |.|.. ||..|..+
T Consensus 88 ~~~~~C~~~~C~~~--f~~~~~L~~H~~~h~~~~~-----------~~C~~~~C~k~f~~~ 135 (155)
T 2rpc_A 88 EKPFPCPFPGCGKI--FARSENLKIHKRTHTGEKP-----------FKCEFEGCDRRFANS 135 (155)
T ss_dssp CCSEECSCTTTCCE--ESCHHHHHHHHTTTCSSCS-----------BCCSSTTCCCCBSSH
T ss_pred CCcccCCcCCCCCc--cCCHHHHHHHHHhhCCCCC-----------ccCCCCCCCCccCCH
Confidence 46788877 8643 4444555677777776543 78887 88877543
No 194
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=40.18 E-value=10 Score=26.06 Aligned_cols=33 Identities=21% Similarity=0.322 Sum_probs=24.3
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|.+|+.. |-....-.+|...|+-+.|
T Consensus 7 ~~~~~~~C~~C~k~--f~~~~~l~~H~~~H~~~k~ 39 (42)
T 2epc_A 7 GGETPYLCGQCGKS--FTQRGSLAVHQRSCSQSGP 39 (42)
T ss_dssp CSSCCEECSSSCCE--ESSHHHHHHHHHHTTCCCC
T ss_pred CCCCCeECCCCCcc--cCCHHHHHHHhhhcCCCCC
Confidence 45678999999764 5555566788888876665
No 195
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.09 E-value=11 Score=26.57 Aligned_cols=33 Identities=24% Similarity=0.485 Sum_probs=23.9
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|.+|+.. |-....-.+|+..|+-+.|
T Consensus 8 ~~~~~~~C~~C~k~--F~~~~~L~~H~~~H~~~k~ 40 (46)
T 2emi_A 8 TGERHYECSECGKA--FIQKSTLSMHQRIHRGEKP 40 (46)
T ss_dssp SSCCCEECSSSCCE--ESSHHHHHHHHGGGCSCCC
T ss_pred CCCCCCCCCCCCcc--cCCHHHHHHHHhHhCCCCC
Confidence 45678999999764 4445556789888876655
No 196
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.83 E-value=11 Score=26.82 Aligned_cols=33 Identities=24% Similarity=0.459 Sum_probs=24.0
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|.+|+.. |-....-.+|+..|+-+.|
T Consensus 8 ~~~k~~~C~~C~k~--F~~~~~L~~H~~~H~~~k~ 40 (46)
T 2ytp_A 8 TGERHYECSECGKA--FARKSTLIMHQRIHTGEKP 40 (46)
T ss_dssp CCCCCEECSSSCCE--ESSHHHHHHHHTTTSCCCC
T ss_pred CCCCCeECCcCCcc--cCCHHHHHHHHHHhCCCCC
Confidence 45678999999764 4455556789888876655
No 197
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.80 E-value=9.6 Score=27.01 Aligned_cols=33 Identities=33% Similarity=0.658 Sum_probs=24.5
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|.+|+.. |-....-.+|+..|+-+.|
T Consensus 8 ~~~~~~~C~~C~k~--F~~~~~L~~H~~~H~~~~~ 40 (46)
T 2em3_A 8 TGEKPYECKVCSKA--FTQKAHLAQHQKTHTGEKP 40 (46)
T ss_dssp SSCCSEECSSSCCE--ESSHHHHHHHHHHHCCCCC
T ss_pred CCCcCeECCCCCcc--cCCHHHHHHHHHHhCCCCC
Confidence 44678999999754 5555666789988876655
No 198
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.13 E-value=3.4 Score=32.20 Aligned_cols=37 Identities=11% Similarity=0.002 Sum_probs=26.1
Q ss_pred cceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccc
Q psy16434 39 NQTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLC 88 (745)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (745)
..+|+|.+|+.. |.....-.+|+..|+.+.| |.|+.|
T Consensus 37 ~~~~~C~~C~~~--f~~~~~l~~H~~~H~~~~~-----------~~C~~C 73 (73)
T 2ctu_A 37 RKTPMCEKCRKD--SCQEAALNKDEGNESGKKT-----------SGPSSG 73 (73)
T ss_dssp SSSCCCHHHHHT--CSCCCSSCCCSSCCCCCCC-----------SSCCCC
T ss_pred CCCCCCCCCChh--hcCHHHHHHHHHhhcCCCC-----------CCCCCC
Confidence 678999999743 4444555688888876654 667776
No 199
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=39.04 E-value=4.1 Score=32.16 Aligned_cols=44 Identities=27% Similarity=0.554 Sum_probs=25.0
Q ss_pred ceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCc
Q psy16434 40 QTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNE 91 (745)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (745)
+.|+|.+|+- .+|-++|-.. +.-|..-..=-+.|.+.|..||-.
T Consensus 2 ~~y~C~vCGy---vYd~~~Gdp~-----~gi~pGt~fe~lP~dw~CP~Cg~~ 45 (54)
T 4rxn_A 2 KKYTCTVCGY---IYDPEDGDPD-----DGVNPGTDFKDIPDDWVCPLCGVG 45 (54)
T ss_dssp CCEEETTTCC---EECTTTCBGG-----GTBCTTCCGGGSCTTCBCTTTCCB
T ss_pred CceECCCCCe---EECCCcCCcc-----cCcCCCCChhHCCCCCcCcCCCCc
Confidence 5799999983 3455554321 111111111124678999999975
No 200
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.86 E-value=9.3 Score=27.01 Aligned_cols=33 Identities=27% Similarity=0.512 Sum_probs=24.5
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|.+|+.. |-....-.+|+..|+.+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~k~ 40 (46)
T 2eow_A 8 TGEKPYKCNECGKA--FRARSSLAIHQATHSGEKP 40 (46)
T ss_dssp CCCCCEECTTSCCE--ESSHHHHHHHHHHHCCCSC
T ss_pred CCCCCeeccccCCh--hcCHHHHHHHHHHcCCCCC
Confidence 44678999999764 5555666789988887665
No 201
>2r79_A Periplasmic binding protein; heme transport, transport prote; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=38.78 E-value=56 Score=32.99 Aligned_cols=52 Identities=12% Similarity=0.199 Sum_probs=40.0
Q ss_pred HHHHHHcCCcEEEeCCcc-cHHHHHHHHHcCCeEEEeC---C----HHHHHHHHHHhCCe
Q psy16434 648 IKAIADTGANVVVAGAKF-GDMALHYLNKYGLMGVRLN---S----KFDLRRLCKAVNAT 699 (745)
Q Consensus 648 V~~I~~~gvnVVl~~~~I-~d~al~~L~k~gIl~ir~v---~----k~dLeRIaraTGA~ 699 (745)
+++|++++||+||..... .....+.|.+.||-++..- + .+.++.|++++|..
T Consensus 52 ~E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~~i~~lg~~~g~~ 111 (283)
T 2r79_A 52 AEGVLALRPDILIGTEEMGPPPVLKQLEGAGVRVETLSAKPDLEALESNLKKLGDWLGVP 111 (283)
T ss_dssp HHHHHTTCCSEEEECTTCCCHHHHHHHHHTTCCEEECCCCSSHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHhcCCCEEEEeCccCcHHHHHHHHHcCCcEEEecCCCCHHHHHHHHHHHHHHhCCH
Confidence 667999999999987643 4567788999999777542 2 34688999999974
No 202
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.22 E-value=8.4 Score=27.40 Aligned_cols=33 Identities=30% Similarity=0.618 Sum_probs=23.8
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|.+|+.. |-....-.+|+..|+.+.|
T Consensus 8 ~~~k~~~C~~C~k~--F~~~~~L~~H~~~H~~~k~ 40 (46)
T 2enh_A 8 TGEKPYECDVCRKA--FSHHASLTQHQRVHSGEKP 40 (46)
T ss_dssp CCSSSCBCTTTCCB--CSSSHHHHHHGGGSCCSCC
T ss_pred CCCCCcCCCCcCch--hCCHHHHHHHHHHhCCCCC
Confidence 44678999999754 4445555689988887665
No 203
>2qtd_A Uncharacterized protein MJ0327; ribonuclease H-like motif fold, iron-molybdenum cofactor, ST genomics; HET: MSE PG4; 1.70A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 2kla_A
Probab=38.11 E-value=52 Score=28.41 Aligned_cols=49 Identities=8% Similarity=0.103 Sum_probs=37.7
Q ss_pred HHHHHcCCcEEEeCCcccHHHHHHHHHcCCeEEEeCCHHHHHHHHHHhCCe
Q psy16434 649 KAIADTGANVVVAGAKFGDMALHYLNKYGLMGVRLNSKFDLRRLCKAVNAT 699 (745)
Q Consensus 649 ~~I~~~gvnVVl~~~~I~d~al~~L~k~gIl~ir~v~k~dLeRIaraTGA~ 699 (745)
+.+.+.|+++|++. +|.+-+.+.|.++ |-++.-.....-+-|.+...++
T Consensus 50 ~~l~~~gv~~vi~~-~iG~~a~~~L~~~-I~v~~~~~~~v~eal~~~~~g~ 98 (105)
T 2qtd_A 50 KSIVKENVNAIICK-NISEENYKKFSKK-IEIYHAEGDDVDKNISLFIEGE 98 (105)
T ss_dssp HHHHHTCCSEEEES-CCCHHHHHHHHTT-CEEEECCSSCHHHHHHHHHTTC
T ss_pred HHHHHCCCCEEEEC-CCCHHHHHHHHhc-cEEEECCCCCHHHHHHHHHcCC
Confidence 55567899999996 7999999999999 9999876655445555554444
No 204
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.05 E-value=9.7 Score=26.96 Aligned_cols=33 Identities=27% Similarity=0.508 Sum_probs=24.3
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|..|+.. |-....-.+|+..|+.+.|
T Consensus 8 ~~~k~~~C~~C~k~--F~~~~~L~~H~~~H~~~k~ 40 (46)
T 2enf_A 8 TGEKPYKCNECGKV--FTQNSHLVRHRGIHTGEKP 40 (46)
T ss_dssp CCCCSCBCSSSCCB--CSSHHHHHHHHTTTTTSSC
T ss_pred CCCcCeECCCCCcc--cCCHHHHHHHHHhhCCCCC
Confidence 44678999999754 5555566789888887665
No 205
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=38.04 E-value=7.2 Score=31.20 Aligned_cols=41 Identities=22% Similarity=0.530 Sum_probs=30.0
Q ss_pred eeeE--eeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhcc--ccCcccc
Q psy16434 41 TYQC--LVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNL--CGNEYKF 94 (745)
Q Consensus 41 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 94 (745)
+|+| ..|+.. |-....-.+|...|+.+.| |.|+. ||..|.-
T Consensus 1 p~~C~~~~C~~~--f~~~~~l~~H~~~h~~~~~-----------~~C~~~~C~~~f~~ 45 (85)
T 2j7j_A 1 MYVCHFENCGKA--FKKHNQLKVHQFSHTQQLP-----------YECPHEGCDKRFSL 45 (85)
T ss_dssp CEECCSTTCCCE--ESSHHHHHHHHHHHHTTCC-----------EECCSTTCCCEESS
T ss_pred CccCCCCCCCcc--cCCHHHHHHHHHHhCCCCC-----------eeCCCCCCcCccCC
Confidence 5899 889754 5555666789888887655 77877 8887754
No 206
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.82 E-value=12 Score=26.55 Aligned_cols=33 Identities=21% Similarity=0.492 Sum_probs=23.9
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|.+|+.. |-....-.+|+..|+.+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~k~ 40 (46)
T 2yth_A 8 SGEKPFQCEECGKR--FTQNSHLHSHQRVHTGEKP 40 (46)
T ss_dssp CCSSSBCCSSSCCC--BSSHHHHHHHGGGGTTCCC
T ss_pred CCCcCCCCCCCCcc--cCCHHHHHHHHHhcCCCCC
Confidence 34578999999764 5555556789888876655
No 207
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=37.64 E-value=8.3 Score=25.24 Aligned_cols=29 Identities=14% Similarity=0.402 Sum_probs=21.1
Q ss_pred eeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 41 TYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+|+|..|+.. |-....-.+|+..|+-..|
T Consensus 2 p~~C~~C~k~--f~~~~~L~~H~~~H~~~kp 30 (32)
T 2kfq_A 2 AFACPACPKR--FMRSDALSKHIKTAFIVVA 30 (32)
T ss_dssp CSSSSSSCTT--HHHHHTTSSSTTSSSSSSS
T ss_pred CCCCCCCCcc--cCCHHHHHHHHHHHccCCC
Confidence 6999999764 5555666788888765554
No 208
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=37.40 E-value=46 Score=34.94 Aligned_cols=52 Identities=12% Similarity=0.010 Sum_probs=39.4
Q ss_pred HHHHHHcCCcEEEeCCcccHHHHHHHHHcCCeEEEeCC-----------HHHHHHHHHHhCCe
Q psy16434 648 IKAIADTGANVVVAGAKFGDMALHYLNKYGLMGVRLNS-----------KFDLRRLCKAVNAT 699 (745)
Q Consensus 648 V~~I~~~gvnVVl~~~~I~d~al~~L~k~gIl~ir~v~-----------k~dLeRIaraTGA~ 699 (745)
+++|++++|||||....-.+...+++.+.||-++..-. .+.++.+++++|..
T Consensus 89 ~E~Ilal~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~~~~~~~~~~~~~~~~i~~lG~~lG~e 151 (346)
T 2etv_A 89 LESLITLQPDVVFITYVDRXTAXDIQEXTGIPVVVLSYGNLGTFEDEDLFRSIELAGXILGRE 151 (346)
T ss_dssp HHHHHHHCCSEEEEESCCHHHHHHHHHHHTSCEEEECCCCTTCSCCHHHHHHHHHHHHHHTCH
T ss_pred HHHHhcCCCCEEEEeCCccchHHHHHHhcCCcEEEEecCccCcccHHHHHHHHHHHHHHcCCH
Confidence 67888999999998765345666778888988775421 45788999999974
No 209
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=37.20 E-value=9.4 Score=23.59 Aligned_cols=26 Identities=27% Similarity=0.554 Sum_probs=17.5
Q ss_pred ceeeEeeecCcchhhhhhhhhhhhhhcc
Q psy16434 40 QTYQCLVCKNKTLFHDLAEGARHVERHH 67 (745)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (745)
.+|+|.+|+.. |.....-.+|...|+
T Consensus 2 k~~~C~~C~k~--f~~~~~l~~H~~~h~ 27 (28)
T 2kvf_A 2 RPYSCSVCGKR--FSLKHQMETHYRVHT 27 (28)
T ss_dssp CSEECSSSCCE--ESCHHHHHHHHTTSC
T ss_pred cCccCCCCCcc--cCCHHHHHHHHHhcC
Confidence 47999999764 444444567777665
No 210
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.15 E-value=10 Score=26.54 Aligned_cols=33 Identities=15% Similarity=0.333 Sum_probs=24.2
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|.+|+.. |-....-.+|+..|+.+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~~~ 40 (44)
T 2yu5_A 8 AGENPFKCSKCDRV--FTQRNYLVQHERTHARKSG 40 (44)
T ss_dssp SCCCSEECSSSSCE--ESSSHHHHHHHHHCCCCCS
T ss_pred CCCCCeECCCCCch--hCCHHHHHHHhHhcCCCCC
Confidence 45678999999764 4455556789988887665
No 211
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.07 E-value=13 Score=26.11 Aligned_cols=33 Identities=27% Similarity=0.490 Sum_probs=24.0
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|..|+.. |-....-.+|+..|+-+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~~p 40 (46)
T 2yts_A 8 TGEKPYICNECGKS--FIQKSHLNRHRRIHTGEKP 40 (46)
T ss_dssp CSCCSEECSSSCCE--ESSHHHHHHHGGGTSSCCS
T ss_pred CCCcCEECCCCChh--hCChHHHHHHHHhcCCCCC
Confidence 44678999999764 5555566789888876655
No 212
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=36.55 E-value=39 Score=33.50 Aligned_cols=52 Identities=13% Similarity=0.220 Sum_probs=39.5
Q ss_pred HHHHHHcCCcEEEeCCcccHHHHHHHHHcCCeEEEe--CC----HHHHHHHHHHhCCe
Q psy16434 648 IKAIADTGANVVVAGAKFGDMALHYLNKYGLMGVRL--NS----KFDLRRLCKAVNAT 699 (745)
Q Consensus 648 V~~I~~~gvnVVl~~~~I~d~al~~L~k~gIl~ir~--v~----k~dLeRIaraTGA~ 699 (745)
+++|++++||+||......+...+.|.+.||-++.. -+ .+.++.+++++|..
T Consensus 53 ~E~i~~l~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~i~~lg~~~g~~ 110 (260)
T 2q8p_A 53 VEAVKKLKPTHVLSVSTIKDEMQPFYKQLNMKGYFYDFDSLKGMQKSITQLGDQFNRK 110 (260)
T ss_dssp HHHHHHTCCSEEEEEGGGHHHHHHHHHHHTSCCEEECCSSHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHhcCCCEEEecCccCHHHHHHHHHcCCcEEEecCCCHHHHHHHHHHHHHHhCCh
Confidence 677889999999987766666778899999765542 12 24678899999974
No 213
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.31 E-value=10 Score=26.93 Aligned_cols=33 Identities=27% Similarity=0.433 Sum_probs=24.5
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|.+|+.. |-....-.+|+..|+.+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~~~ 40 (46)
T 2eoz_A 8 TGEKPYSCNVCGKA--FVLSAHLNQHLRVHTQETL 40 (46)
T ss_dssp SSCCSEEETTTTEE--ESSHHHHHHHHHHHSSCCS
T ss_pred CCCCCeECcccChh--hCCHHHHHHHHHHhCCCCC
Confidence 34578999999754 5556666789999887655
No 214
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.75 E-value=13 Score=26.13 Aligned_cols=33 Identities=27% Similarity=0.519 Sum_probs=23.8
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|..|+.. |-....-.+|+..|+-+.|
T Consensus 8 ~~~~~~~C~~C~k~--f~~~~~L~~H~~~H~~~k~ 40 (46)
T 2yrj_A 8 TGEKPYRCGECGKA--FAQKANLTQHQRIHTGEKP 40 (46)
T ss_dssp CCCCCEECSSSCCE--ESSHHHHHHHHTTTSSCCS
T ss_pred CCCCCeECCCCCCc--cCCHHHHHHHHHHcCCCCC
Confidence 44678999999764 5555566789888876655
No 215
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=35.74 E-value=12 Score=32.39 Aligned_cols=43 Identities=23% Similarity=0.525 Sum_probs=30.7
Q ss_pred cceeeEe--eecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCcccce
Q psy16434 39 NQTYQCL--VCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNEYKFR 95 (745)
Q Consensus 39 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (745)
..+|+|. .|+. .|.....-.+|+..| .. ..|.|..||..|..+
T Consensus 3 ~~~~~C~~~~C~~--~f~~~~~l~~H~~~h-~~-----------~~~~C~~C~~~f~~~ 47 (124)
T 1ubd_C 3 PRTIACPHKGCTK--MFRDNSAMRKHLHTH-GP-----------RVHVCAECGKAFVES 47 (124)
T ss_dssp --CEECCSTTCCC--EESSHHHHHHHHGGG-SC-----------CCEECTTTCCEESSH
T ss_pred CCcccCCCCCCcC--ccCCHHHHHHHHHHc-CC-----------CCeECCCCCchhCCH
Confidence 3579999 8975 467777778898877 22 248899999887644
No 216
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=35.68 E-value=67 Score=31.69 Aligned_cols=52 Identities=17% Similarity=0.172 Sum_probs=39.4
Q ss_pred HHHHHHcCCcEEEeCCc-ccHHHHHHHHHcCCeEEEeC----CHH----HHHHHHHHhCCe
Q psy16434 648 IKAIADTGANVVVAGAK-FGDMALHYLNKYGLMGVRLN----SKF----DLRRLCKAVNAT 699 (745)
Q Consensus 648 V~~I~~~gvnVVl~~~~-I~d~al~~L~k~gIl~ir~v----~k~----dLeRIaraTGA~ 699 (745)
+++|++++||+||.... ......+.|.+.||-++..- +.. .++.+++++|-.
T Consensus 52 ~E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~~~i~~lg~~~g~~ 112 (256)
T 2r7a_A 52 SEGILSLRPDSVITWQDAGPQIVLDQLRAQKVNVVTLPRVPATLEQMYANIRQLAKTLQVP 112 (256)
T ss_dssp HHHHHTTCCSEEEEETTCSCHHHHHHHHHTTCEEEEECCCSCCHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHccCCCEEEEcCCCCCHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHHhCCH
Confidence 67889999999998754 45667788899998766432 222 578999999964
No 217
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=35.56 E-value=15 Score=23.98 Aligned_cols=31 Identities=26% Similarity=0.498 Sum_probs=20.6
Q ss_pred ccceeeEeeecCcchhhhhhhhhhhhhhccCCC
Q psy16434 38 RNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQ 70 (745)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (745)
...+|+|..|+.. |-....-.+|+..|+=..
T Consensus 4 ~~k~~~C~~C~k~--f~~~~~l~~H~~~H~~~~ 34 (35)
T 1srk_A 4 GKRPFVCRICLSA--FTTKANCARHLKVHTDTL 34 (35)
T ss_dssp CCSCEECSSSCCE--ESSHHHHHHHHGGGTSCC
T ss_pred CCcCeeCCCCCcc--cCCHHHHHHHHHHcCCCC
Confidence 3568999999754 444455567887776433
No 218
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.34 E-value=11 Score=26.42 Aligned_cols=33 Identities=27% Similarity=0.494 Sum_probs=24.2
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|..|... |.....-.+|...|+-+.|
T Consensus 6 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~k~ 38 (43)
T 2yrm_A 6 SGNGAFFCNECDCR--FSEEASLKRHTLQTHSDKS 38 (43)
T ss_dssp SSSCCBCCSSSCCC--BSSHHHHHHHHHHHTCTTC
T ss_pred CCCCCEECCCCCCe--eCChHHHHHHHHhhCCCCC
Confidence 44678999999764 5555666789888876655
No 219
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=34.88 E-value=12 Score=26.45 Aligned_cols=33 Identities=24% Similarity=0.486 Sum_probs=24.0
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|.+|+.. |-....-.+|+..|+.+.|
T Consensus 8 ~~~k~~~C~~C~k~--F~~~~~L~~H~~~H~~~k~ 40 (46)
T 2emj_A 8 TGEKPFECAECGKS--FSISSQLATHQRIHTGEKP 40 (46)
T ss_dssp CCCCSEECSSSSCE--ESSHHHHHHHHHHHTTSCS
T ss_pred CCCCCEECCCCCcc--cCCHHHHHHHHHHhCCCCC
Confidence 34578999999754 4555566789988876655
No 220
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.74 E-value=13 Score=26.34 Aligned_cols=33 Identities=33% Similarity=0.598 Sum_probs=23.9
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|.+|+.. |-....-.+|+..|+-+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~k~ 40 (46)
T 2eq2_A 8 TGGKPYQCNECGKA--FSQTSKLARHQRVHTGEKP 40 (46)
T ss_dssp SSSCSSSCCSSCCC--CSSHHHHHHHGGGGCCCCC
T ss_pred CCCCCeECCCCCcc--cCCHHHHHHHHHHcCCCCC
Confidence 44678999999764 5555566789888876554
No 221
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.74 E-value=10 Score=26.89 Aligned_cols=33 Identities=24% Similarity=0.484 Sum_probs=24.0
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|..|+.. |-....-.+|+..|+.+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~k~ 40 (46)
T 2eq1_A 8 TGEKPYKCNECGKA--FRAHSNLTTHQVIHTGEKP 40 (46)
T ss_dssp CCSCCCCCTTTTCC--CSSHHHHHHHHTTTCCSCC
T ss_pred CCCCCeECCcCChh--hCCHHHHHHHHHHhCCCCC
Confidence 34678999999754 5555556789888876665
No 222
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=34.19 E-value=59 Score=32.10 Aligned_cols=52 Identities=12% Similarity=0.205 Sum_probs=40.3
Q ss_pred HHHHHHcCCcEEEeCCccc-HHHHHHHHHcCCeEEEeC---C----HHHHHHHHHHhCCe
Q psy16434 648 IKAIADTGANVVVAGAKFG-DMALHYLNKYGLMGVRLN---S----KFDLRRLCKAVNAT 699 (745)
Q Consensus 648 V~~I~~~gvnVVl~~~~I~-d~al~~L~k~gIl~ir~v---~----k~dLeRIaraTGA~ 699 (745)
+++|++++||+||...... ....+.|.+.||-++..- + .+.++.+++++|..
T Consensus 52 ~E~i~~l~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~~i~~lg~~~g~~ 111 (255)
T 3md9_A 52 AEGILAMKPTMLLVSELAQPSLVLTQIASSGVNVVTVPGQTTPESVAMKINAVATALHQT 111 (255)
T ss_dssp HHHHHTTCCSEEEEETTCSCHHHHHHHHHTTCEEEEECCCCSHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHccCCCEEEEcCCcCchhHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHHHHHhCCH
Confidence 6789999999999987654 456778899998887542 2 23578999999964
No 223
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=33.97 E-value=11 Score=25.12 Aligned_cols=30 Identities=30% Similarity=0.456 Sum_probs=20.6
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHW 68 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (745)
+...+|+|.+|+.. |-....-.+|...|+.
T Consensus 7 ~~~k~~~C~~C~k~--f~~~~~l~~H~~~H~~ 36 (37)
T 1p7a_A 7 TGIKPFQCPDCDRS--FSRSDHLALHRKRHML 36 (37)
T ss_dssp CCSSSBCCTTTCCC--BSSHHHHHHHHGGGTC
T ss_pred CCCCCccCCCCCcc--cCcHHHHHHHHHHhcc
Confidence 34568999999864 4444555678777764
No 224
>2wi8_A Iron-uptake system-binding protein; bacillibactin and enterobactin binding, triscatecholate BIND protein, iron transport; 1.55A {Bacillus subtilis} PDB: 2why_A 2xuz_A* 2xv1_A* 2phz_A
Probab=33.76 E-value=63 Score=33.13 Aligned_cols=52 Identities=19% Similarity=0.238 Sum_probs=40.2
Q ss_pred HHHHHHcCCcEEEeCCcccHHHHHHHHHcCCeEEEeCC----HHHHHHHHHHhCCe
Q psy16434 648 IKAIADTGANVVVAGAKFGDMALHYLNKYGLMGVRLNS----KFDLRRLCKAVNAT 699 (745)
Q Consensus 648 V~~I~~~gvnVVl~~~~I~d~al~~L~k~gIl~ir~v~----k~dLeRIaraTGA~ 699 (745)
+++|++++|||||.....++...+.|.+.|..++-... .+.++.|++++|..
T Consensus 89 ~E~I~~l~PDLIi~~~~~~~~~~~~L~~~gp~v~~~~~~~~~~~~i~~lg~~lg~e 144 (311)
T 2wi8_A 89 IEKILEMKPDVILASTKFPEKTLQKISTAGTTIPVSHISSNWKENMMLLAQLTGKE 144 (311)
T ss_dssp HHHHHHHCCSEEEEETTSCHHHHHHHHTTSCEEEECCCGGGHHHHHHHHHHHHTCH
T ss_pred HHHHHhCCCCEEEEcCccCHHHHHHHHhhCCEEEeeCCCcCHHHHHHHHHHHhCCH
Confidence 67788999999998766677788889998876654322 34688999999974
No 225
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.59 E-value=14 Score=26.21 Aligned_cols=33 Identities=24% Similarity=0.542 Sum_probs=23.9
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|.+|+.. |-....-.+|+..|+-+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~k~ 40 (46)
T 2em4_A 8 TGQRPYECIECGKA--FKTKSSLICHRRSHTGEKP 40 (46)
T ss_dssp CCSSSEECSSSCCE--ESSHHHHHHHHHHHSSSSC
T ss_pred CCCcCcCCCCCCCc--cCCHHHHHHHHHhcCCCCC
Confidence 44678999999764 4445556789988886665
No 226
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.58 E-value=10 Score=26.51 Aligned_cols=33 Identities=24% Similarity=0.465 Sum_probs=24.3
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|.+|+. .|-....-.+|+..|+-+.|
T Consensus 8 ~~~~~~~C~~C~k--~F~~~~~L~~H~~~H~~~~~ 40 (44)
T 2eox_A 8 TDSKSYNCNECGK--AFTRIFHLTRHQKIHTRKSG 40 (44)
T ss_dssp CCCCCEEETTTTE--EESSSHHHHTTHHHHCCCCC
T ss_pred CCCCCeECcccCc--ccCCHHHHHHHHHHhCCCCC
Confidence 3457899999975 35556666789999886655
No 227
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.09 E-value=14 Score=24.38 Aligned_cols=29 Identities=17% Similarity=0.454 Sum_probs=20.0
Q ss_pred ccceeeEeeecCcchhhhhhhhhhhhhhccC
Q psy16434 38 RNQTYQCLVCKNKTLFHDLAEGARHVERHHW 68 (745)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (745)
...+|+|..|... |-....-.+|+..|+.
T Consensus 6 ~~k~~~C~~C~k~--f~~~~~l~~H~~~H~~ 34 (36)
T 2elq_A 6 SGKPFKCSLCEYA--TRSKSNLKAHMNRHST 34 (36)
T ss_dssp CCCSEECSSSSCE--ESCHHHHHHHHHHSST
T ss_pred CCCCccCCCCCch--hCCHHHHHHHHHHhcc
Confidence 4578999999754 4444555678877764
No 228
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.01 E-value=9.8 Score=26.51 Aligned_cols=33 Identities=21% Similarity=0.311 Sum_probs=23.7
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|.+|+.. |-....-.+|+..|+-+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~~~ 40 (44)
T 2en7_A 8 TGMKPYVCNECGKA--FRSKSYLIIHTRTHTGESG 40 (44)
T ss_dssp SSSSSSCCTTTCCC--CSSHHHHHHHHTTTCCSSS
T ss_pred CCCcCeECCCCCCc--cCCHHHHHHHhhhcCCCCC
Confidence 34578999999764 5555566788888876655
No 229
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.00 E-value=15 Score=25.89 Aligned_cols=33 Identities=21% Similarity=0.514 Sum_probs=24.1
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|..|+.. |-....-.+|+..|+-+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~k~ 40 (46)
T 2ytf_A 8 TGEKPFECSECQKA--FNTKSNLIVHQRTHTGEKP 40 (46)
T ss_dssp CCCCSEECSSSCCE--ESSHHHHHHHHHTSCSSSS
T ss_pred CCCCCcCCCCCCcc--cCCHHHHHHHHHHhCCCCC
Confidence 44678999999754 5555666789888876655
No 230
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=32.89 E-value=9.9 Score=23.48 Aligned_cols=26 Identities=27% Similarity=0.520 Sum_probs=18.7
Q ss_pred eeeEeeecCcchhhhhhhhhhhhhhccC
Q psy16434 41 TYQCLVCKNKTLFHDLAEGARHVERHHW 68 (745)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (745)
+|+|.+|+.. |.....-.+|...|+-
T Consensus 2 ~~~C~~C~~~--f~~~~~l~~H~~~h~~ 27 (29)
T 1ard_A 2 SFVCEVCTRA--FARQEHLKRHYRSHTN 27 (29)
T ss_dssp CCBCTTTCCB--CSSHHHHHHHHHHHSC
T ss_pred CeECCCCCcc--cCCHHHHHHHHHHhcC
Confidence 6999999754 5555566778877753
No 231
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.59 E-value=12 Score=26.38 Aligned_cols=33 Identities=24% Similarity=0.442 Sum_probs=23.6
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|..|+.. |-....-.+|+..|+-+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~k~ 40 (46)
T 2eq3_A 8 TGEKPYECNQCGKA--FSVRSSLTTHQAIHTGKKP 40 (46)
T ss_dssp CCCCSSEETTTTEE--CSSHHHHHHHHTTSCCCCC
T ss_pred CCCCCeECCCCChh--hCCHHHHHHHHHHhCCCCC
Confidence 34678999999754 5555566788888876655
No 232
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.34 E-value=16 Score=25.52 Aligned_cols=33 Identities=18% Similarity=0.361 Sum_probs=23.6
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|..|+.. |-....-.+|+..|+-+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~~~ 40 (44)
T 2emb_A 8 HTRKRYECSKCQAT--FNLRKHLIQHQKTHAAKSG 40 (44)
T ss_dssp CCCSSEECTTTCCE--ESCHHHHHHHGGGGCCCCC
T ss_pred CCCCCeECCCCCCc--cCCHHHHHHHHHHcCCCCC
Confidence 34678999999864 4445555789888876655
No 233
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.25 E-value=14 Score=25.94 Aligned_cols=33 Identities=18% Similarity=0.415 Sum_probs=22.9
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|..|... |.....-.+|+..|+-+.|
T Consensus 8 ~~~k~~~C~~C~k~--F~~~~~L~~H~~~H~~~k~ 40 (45)
T 2epu_A 8 TGQKPFECTHCGKS--FRAKGNLVTHQRIHTGEKS 40 (45)
T ss_dssp CSCCSEEETTTTEE--ESSHHHHHHHHTTTSSCCC
T ss_pred CCCcCccCCCCCCc--cCChHHHHHHHHHhCCCCC
Confidence 34578999999754 4444555688888876554
No 234
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=38.26 E-value=9.7 Score=23.76 Aligned_cols=26 Identities=27% Similarity=0.621 Sum_probs=18.0
Q ss_pred ceeeEeeecCcchhhhhhhhhhhhhhcc
Q psy16434 40 QTYQCLVCKNKTLFHDLAEGARHVERHH 67 (745)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (745)
.+|+|..|+.. |-....-.+|+..|+
T Consensus 1 k~~~C~~C~k~--f~~~~~l~~H~~~H~ 26 (29)
T 2lvt_A 1 KPCQCVMCGKA--FTQASSLIAHVRQHT 26 (29)
Confidence 37999999753 555555567877765
No 235
>1n2z_A Vitamin B12 transport protein BTUF; HET: CNC PG4; 2.00A {Escherichia coli} SCOP: c.92.2.2 PDB: 2qi9_F* 4dbl_E 1n4a_A* 1n4d_A
Probab=32.03 E-value=51 Score=32.39 Aligned_cols=52 Identities=15% Similarity=0.190 Sum_probs=39.0
Q ss_pred HHHHHHcCCcEEEeCC-cccHHHHHHHHHcCCeEEEeCC------HHHHHHHHHHhCCe
Q psy16434 648 IKAIADTGANVVVAGA-KFGDMALHYLNKYGLMGVRLNS------KFDLRRLCKAVNAT 699 (745)
Q Consensus 648 V~~I~~~gvnVVl~~~-~I~d~al~~L~k~gIl~ir~v~------k~dLeRIaraTGA~ 699 (745)
+++|++++||+||... +.++...+.|.+.||-++..-. .+.++.+++++|..
T Consensus 50 ~E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~i~~lg~~lg~~ 108 (245)
T 1n2z_A 50 LERIVALKPDLVIAWRGGNAERQVDQLASLGIKVMWVDATSIEQIANALRQLAPWSPQP 108 (245)
T ss_dssp HHHHHHTCCSEEEECTTTSCHHHHHHHHHHTCCEEECCCCSHHHHHHHHHHHGGGCSCH
T ss_pred HHHHhccCCCEEEEeCCCCcHHHHHHHHHCCCcEEEeCCCCHHHHHHHHHHHHHHhCCH
Confidence 6788899999999863 4667778889999988775321 23577888888863
No 236
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.96 E-value=14 Score=26.12 Aligned_cols=33 Identities=21% Similarity=0.389 Sum_probs=23.8
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|..|+.. |-....-.+|+..|+-..|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~k~ 40 (46)
T 2yto_A 8 TGEKPYKCSDCGKA--FTRKSGLHIHQQSHTGERH 40 (46)
T ss_dssp CSCCCEECSSSCCE--ESSHHHHHHHHHHHTCCCB
T ss_pred CCCCCEECcccCCc--cCCHhHHHHHHHHcCCCCC
Confidence 44678999999764 5555566789888876554
No 237
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.96 E-value=13 Score=26.37 Aligned_cols=33 Identities=18% Similarity=0.320 Sum_probs=23.7
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|..|... |-....-.+|+..|+-+.|
T Consensus 8 ~~~k~~~C~~C~k~--F~~~~~L~~H~~~H~~~k~ 40 (46)
T 2eom_A 8 HGERGHRCSDCGKF--FLQASNFIQHRRIHTGEKP 40 (46)
T ss_dssp CCCSSCCCSSSCCC--CSSHHHHHHHHHHHSSCCC
T ss_pred CCCCCcCCCCCCCe--eCChHHHHHHHHHhCCCCC
Confidence 34578999999764 4455556789888876655
No 238
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=31.89 E-value=16 Score=28.89 Aligned_cols=44 Identities=23% Similarity=0.517 Sum_probs=30.5
Q ss_pred ccceeeEee--ecCcchhhhhhhhhhhhhh-ccCCCCCCCceEEeecchhhcc--ccCcccc
Q psy16434 38 RNQTYQCLV--CKNKTLFHDLAEGARHVER-HHWDQPDKNSLFVISDRFLCNL--CGNEYKF 94 (745)
Q Consensus 38 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 94 (745)
...+|+|.. |+.. |.....-.+|+.. |.-.. .|.|.. ||..|..
T Consensus 4 ~~~~~~C~~~~C~~~--f~~~~~L~~H~~~~H~~~~-----------~~~C~~~~C~k~f~~ 52 (79)
T 2dlk_A 4 GSSGMPCDFPGCGRI--FSNRQYLNHHKKYQHIHQK-----------SFSCPEPACGKSFNF 52 (79)
T ss_dssp CCSSEECSSTTTCCE--ESSHHHHHHHHHHGGGSCC-----------CEECSCTTTCCEESS
T ss_pred CCCCccCCCCCCcCc--cCCHHHHHHHHHHHhCCCC-----------CeECCCCCCcCccCC
Confidence 356799987 9654 5556666789884 54433 388999 9987754
No 239
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.72 E-value=14 Score=25.95 Aligned_cols=33 Identities=24% Similarity=0.459 Sum_probs=23.9
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|..|+.. |-....-.+|+..|+-+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~k~ 40 (46)
T 2ep1_A 8 TGEKPYECSDCGKS--FIKKSQLHVHQRIHTGENP 40 (46)
T ss_dssp SSCCSSCCSSSCCC--CSSHHHHHHHHGGGSSSCC
T ss_pred CCCCCcCCCCCCch--hCCHHHHHHHHHHhCCCCC
Confidence 45678999999754 5555566789888876655
No 240
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=31.29 E-value=11 Score=23.40 Aligned_cols=25 Identities=28% Similarity=0.626 Sum_probs=16.5
Q ss_pred ceeeEeeecCcchhhhhhhhhhhhhhc
Q psy16434 40 QTYQCLVCKNKTLFHDLAEGARHVERH 66 (745)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 (745)
.+|+|..|+.. |-....-.+|...|
T Consensus 2 k~~~C~~C~k~--f~~~~~l~~H~~~H 26 (27)
T 2kvg_A 2 APYRCPLCRAG--CPSLASMQAHMRGH 26 (27)
T ss_dssp CTEEETTTTEE--ESCHHHHHHHHTTC
T ss_pred cCcCCCCCCcc--cCCHHHHHHHHHhc
Confidence 47999999754 44444455676665
No 241
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.21 E-value=17 Score=24.02 Aligned_cols=29 Identities=28% Similarity=0.564 Sum_probs=20.0
Q ss_pred ccceeeEeeecCcchhhhhhhhhhhhhhccC
Q psy16434 38 RNQTYQCLVCKNKTLFHDLAEGARHVERHHW 68 (745)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (745)
...+|+|.+|+.. |-....-.+|+..|+.
T Consensus 6 ~~k~~~C~~C~k~--f~~~~~l~~H~~~H~~ 34 (36)
T 2elv_A 6 SGLLYDCHICERK--FKNELDRDRHMLVHGD 34 (36)
T ss_dssp CCCCEECSSSCCE--ESSHHHHHHHHTTTST
T ss_pred CCCCeECCCCCCc--cCCHHHHHHHHHHhcC
Confidence 4568999999864 4444555678777753
No 242
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.13 E-value=16 Score=25.89 Aligned_cols=33 Identities=15% Similarity=0.334 Sum_probs=23.4
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccC-CCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHW-DQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 71 (745)
+...+|+|.+|+.. |-....-.+|+..|+. +.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~~~~ 41 (46)
T 2eoy_A 8 QKEKCFKCNKCEKT--FSCSKYLTQHERIHTRGVKS 41 (46)
T ss_dssp CCSCCEECSSSCCE--ESSSHHHHHHHTTCCSCCTT
T ss_pred CCCCCEECcCCCCc--CCCHHHHHHHHHHcCCCCCC
Confidence 34578999999754 4455556788888876 554
No 243
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.01 E-value=13 Score=26.41 Aligned_cols=33 Identities=21% Similarity=0.470 Sum_probs=24.2
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|.+|+.. |-....-.+|+..|+.+.|
T Consensus 8 ~~~k~~~C~~C~k~--F~~~~~L~~H~~~H~~~k~ 40 (46)
T 2en9_A 8 AGKKLFKCNECKKT--FTQSSSLTVHQRIHTGEKP 40 (46)
T ss_dssp CSSCCCBCTTTCCB--CSSHHHHHHHHHHHTSSCC
T ss_pred CCCCCEECCccCcc--cCCHHHHHHHHHHcCCCCC
Confidence 34578999999754 5555556789999887665
No 244
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.78 E-value=14 Score=25.65 Aligned_cols=33 Identities=21% Similarity=0.427 Sum_probs=23.7
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|..|+.. |-....-.+|+..|+-+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~~~ 40 (44)
T 2eof_A 8 TGEKPYECNECQKA--FNTKSNLMVHQRTHTGESG 40 (44)
T ss_dssp SCCCSEECTTTCCE--ESCHHHHHHHHHHTTTSSC
T ss_pred CCCCCeECCCCCcc--cCCHhHHHHHHHHhCCCCC
Confidence 34578999999754 5555566789888876655
No 245
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.36 E-value=10 Score=26.87 Aligned_cols=33 Identities=24% Similarity=0.464 Sum_probs=23.8
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|.+|+.. |-....-.+|+..|+-+.|
T Consensus 8 ~~~k~~~C~~C~k~--F~~~~~L~~H~~~H~~~~~ 40 (46)
T 2en3_A 8 TGEKPFQCKECGMN--FSWSCSLFKHLRSHERTDP 40 (46)
T ss_dssp CCCCSEECSSSCCE--ESSSHHHHHHHHHHHHSCC
T ss_pred CCCCCeeCcccChh--hCCHHHHHHHHHHhCCCCC
Confidence 34678999999754 4444555789988887665
No 246
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.20 E-value=14 Score=26.07 Aligned_cols=33 Identities=21% Similarity=0.396 Sum_probs=23.6
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|.+|+.. |-....-.+|+..|+-+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~~~ 40 (46)
T 2emg_A 8 TGENPFICSECGKV--FTHKTNLIIHQKIHTGERP 40 (46)
T ss_dssp CSCCSCBCTTTCCB--CSSHHHHHHHHTTTSCCCC
T ss_pred CCCCCEECCccCcc--cCCHHHHHHHHHHhCCCCC
Confidence 34578999999764 5555566789888876555
No 247
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.11 E-value=13 Score=25.61 Aligned_cols=33 Identities=24% Similarity=0.477 Sum_probs=23.5
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|.+|+.. |-....-.+|+..|+-+.|
T Consensus 6 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~~~ 38 (42)
T 2yte_A 6 SGEKPYSCAECKET--FSDNNRLVQHQKMHTVKSG 38 (42)
T ss_dssp CSCCSCBCTTTCCB--CSSHHHHHHHHHHTSCCSS
T ss_pred CCCCCeECCCCCCc--cCCHHHHHHHHHHhCCCCC
Confidence 34578999999764 5555556789888876554
No 248
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=29.83 E-value=15 Score=33.11 Aligned_cols=15 Identities=20% Similarity=0.060 Sum_probs=6.3
Q ss_pred hhhhhhhhhhhhccC
Q psy16434 54 HDLAEGARHVERHHW 68 (745)
Q Consensus 54 ~~~~~~~~~~~~~~~ 68 (745)
.....-.+|+..|+-
T Consensus 50 ~~~~~l~~H~~~h~~ 64 (155)
T 2gli_A 50 KAQYMLVVHMRRHTG 64 (155)
T ss_dssp SSHHHHHHHTHHHHC
T ss_pred hhHHHHHHHHHhcCC
Confidence 333333444444443
No 249
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.53 E-value=16 Score=25.82 Aligned_cols=33 Identities=18% Similarity=0.508 Sum_probs=23.5
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|.+|+.. |-....-.+|+..|+-+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~k~ 40 (46)
T 2eoh_A 8 SGKKPYECKECRKT--FIQIGHLNQHKRVHTGERS 40 (46)
T ss_dssp CCSCSCCCSSSCCC--CSSHHHHHHHHHHCSSCCS
T ss_pred CCCCCcCCCCcCch--hCCHHHHHHHHHHhCCCCC
Confidence 44578999999764 4455556689888876554
No 250
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.46 E-value=13 Score=24.45 Aligned_cols=30 Identities=27% Similarity=0.350 Sum_probs=20.7
Q ss_pred ccceeeEeeecCcchhhhhhhhhhhhhhccCC
Q psy16434 38 RNQTYQCLVCKNKTLFHDLAEGARHVERHHWD 69 (745)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (745)
...+|+|.+|+.. |-....-.+|...|+.+
T Consensus 6 ~~~~~~C~~C~k~--f~~~~~l~~H~~~H~~e 35 (36)
T 2elr_A 6 SGKTHLCDMCGKK--FKSKGTLKSHKLLHTAD 35 (36)
T ss_dssp CCSSCBCTTTCCB--CSSHHHHHHHHHHHSSC
T ss_pred CCCCeecCcCCCC--cCchHHHHHHHHHhcCC
Confidence 4578999999753 44445556788877653
No 251
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.38 E-value=14 Score=25.52 Aligned_cols=33 Identities=27% Similarity=0.497 Sum_probs=23.9
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|..|+.. |-....-.+|+..|+-+.|
T Consensus 7 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~~~ 39 (42)
T 2en2_A 7 GGEKPYKCETCGAR--FVQVAHLRAHVLIHTGSGP 39 (42)
T ss_dssp CSSCSEECTTTCCE--ESSHHHHHHHTHHHHSCCS
T ss_pred CCCCCEeCCCcChh--hCCHHHHHHHHHHcCCCCC
Confidence 45678999999764 4455556788888876655
No 252
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.05 E-value=14 Score=26.05 Aligned_cols=33 Identities=24% Similarity=0.465 Sum_probs=23.8
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|.+|+.. |-....-.+|+..|+-+.|
T Consensus 8 ~~~~~~~C~~C~k~--f~~~~~L~~H~~~H~~~kp 40 (46)
T 2eor_A 8 TGEKPYNCEECGKA--FIHDSQLQEHQRIHTGEKP 40 (46)
T ss_dssp SCCCSEECTTTCCE--ESSHHHHHHHHHHHHSCCC
T ss_pred CCCcCccCCCCCCC--cCCHHHHHHHHHhcCCCCC
Confidence 34578999999764 4455566789988876655
No 253
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=28.98 E-value=6.7 Score=32.76 Aligned_cols=43 Identities=14% Similarity=0.444 Sum_probs=27.6
Q ss_pred eeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeec--chhhccccCccc
Q psy16434 42 YQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISD--RFLCNLCGNEYK 93 (745)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 93 (745)
-+|++|+..+|-++ .+-+ .++- +...++|.+ -+.|..||..|-
T Consensus 3 m~Cp~Cg~~~l~~~----~~~~---~~~~--~G~~~~I~~Vp~~~C~~CGE~~~ 47 (78)
T 3ga8_A 3 MKCPVCHQGEMVSG----IKDI---PYTF--RGRKTVLKGIHGLYCVHCEESIM 47 (78)
T ss_dssp CBCTTTSSSBEEEE----EEEE---EEEE--TTEEEEEEEEEEEEETTTCCEEC
T ss_pred eECCCCCCCeeEeE----EEEE---EEEE--CCEEEEEcCceeEECCCCCCEEE
Confidence 37999998775433 2222 2222 445567765 789999998873
No 254
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=28.92 E-value=16 Score=22.34 Aligned_cols=25 Identities=20% Similarity=0.691 Sum_probs=16.8
Q ss_pred ceeeEeeecCcchhhhhhhhhhhhhhc
Q psy16434 40 QTYQCLVCKNKTLFHDLAEGARHVERH 66 (745)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 (745)
.+|+|..|+.. |.....-.+|+..|
T Consensus 2 k~~~C~~C~k~--f~~~~~l~~H~~~H 26 (27)
T 2kvh_A 2 KPFSCSLCPQR--SRDFSAMTKHLRTH 26 (27)
T ss_dssp CCEECSSSSCE--ESSHHHHHHHHHHC
T ss_pred cCccCCCcChh--hCCHHHHHHHHHHc
Confidence 57999999754 44445556676665
No 255
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=28.62 E-value=90 Score=32.38 Aligned_cols=51 Identities=20% Similarity=0.163 Sum_probs=39.0
Q ss_pred HHHHHHcCCcEEEeCCcccHHHHHHHHHcCCeEEEeCC------HHHHHHHHHHhCCe
Q psy16434 648 IKAIADTGANVVVAGAKFGDMALHYLNKYGLMGVRLNS------KFDLRRLCKAVNAT 699 (745)
Q Consensus 648 V~~I~~~gvnVVl~~~~I~d~al~~L~k~gIl~ir~v~------k~dLeRIaraTGA~ 699 (745)
+++|++++|||||.... .....+.|.+.||-++..-. .+.++.|++++|-.
T Consensus 109 ~E~i~al~PDLIi~~~~-~~~~~~~L~~~gipvv~~~~~~~~~~~~~i~~lg~~lg~e 165 (335)
T 4hn9_A 109 TEACVAATPDVVFLPMK-LKKTADTLESLGIKAVVVNPEDQSLLEECITLVGKITNNA 165 (335)
T ss_dssp HHHHHHTCCSEEEEEGG-GHHHHHHHHHTTCCEEEECCCSHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHhcCCCEEEEeCc-chhHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHHcCCH
Confidence 67888999999999766 45566778999988876432 24678899999864
No 256
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=28.50 E-value=15 Score=27.14 Aligned_cols=33 Identities=24% Similarity=0.502 Sum_probs=23.9
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|.+|+.. |-....-.+|...|+-+.|
T Consensus 20 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~kp 52 (54)
T 1yui_A 20 QSEQPATCPICYAV--IRQSRNLRRHLELRHFAKP 52 (54)
T ss_dssp TSSCCEECTTTCCE--ESSHHHHHHHHHHHTTTSC
T ss_pred CCCCCccCCCCCcc--cCCHHHHHHHHHHhccCCC
Confidence 44578999999864 5555566789888876655
No 257
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.16 E-value=16 Score=25.42 Aligned_cols=33 Identities=21% Similarity=0.389 Sum_probs=23.0
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|.+|+.. |-....-.+|+..|+-+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~~~ 40 (44)
T 2eoj_A 8 TGENPYECCECGKV--FSRKDQLVSHQKTHSGQSG 40 (44)
T ss_dssp SSCCSCEETTTTEE--CSSHHHHHHHHTTSSSSCS
T ss_pred CCCcCeeCCCCCCc--cCCHHHHHHHHHHcCCCCC
Confidence 44578999999754 4455555788888876544
No 258
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.15 E-value=15 Score=25.98 Aligned_cols=33 Identities=30% Similarity=0.531 Sum_probs=23.7
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|..|+.. |-....-.+|+..|+-+.|
T Consensus 8 ~~~k~~~C~~C~k~--F~~~~~L~~H~~~H~~~k~ 40 (46)
T 2yti_A 8 TGEKPYKCNECGKV--FTQNSHLARHRGIHTGEKP 40 (46)
T ss_dssp SCCCTTCCSSSCCC--CSSHHHHHHHHTTTSCSCC
T ss_pred CCCcCeECCCCCcc--cCChhHHHHHhHhcCCCCC
Confidence 34678999999754 4555556789888876655
No 259
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=28.02 E-value=16 Score=24.05 Aligned_cols=29 Identities=17% Similarity=0.421 Sum_probs=21.0
Q ss_pred eeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 41 TYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+|+|.+|+.. |-....-.+|+..|+-+.|
T Consensus 2 p~~C~~C~k~--F~~~~~L~~H~~~H~~~~~ 30 (33)
T 1rim_A 2 KFACPECPKR--FMRSDHLSKHITLHELLGE 30 (33)
T ss_dssp CCCCSSSCCC--CSSHHHHHHHHHHHTTTCC
T ss_pred cccCCCCCch--hCCHHHHHHHHHHhCCCCC
Confidence 6999999864 4444555688888876665
No 260
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.01 E-value=16 Score=24.11 Aligned_cols=29 Identities=17% Similarity=0.327 Sum_probs=19.9
Q ss_pred ccceeeEeeecCcchhhhhhhhhhhhhhccC
Q psy16434 38 RNQTYQCLVCKNKTLFHDLAEGARHVERHHW 68 (745)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (745)
...+|+|..|... |-....-.+|+..|+-
T Consensus 6 ~~k~~~C~~C~k~--f~~~~~l~~H~~~H~~ 34 (36)
T 2els_A 6 SGKIFTCEYCNKV--FKFKHSLQAHLRIHTN 34 (36)
T ss_dssp CCCCEECTTTCCE--ESSHHHHHHHHHHHCC
T ss_pred CCCCEECCCCCce--eCCHHHHHHHHHHhCC
Confidence 3468999999764 4455555678777753
No 261
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=27.43 E-value=12 Score=22.85 Aligned_cols=28 Identities=25% Similarity=0.504 Sum_probs=18.4
Q ss_pred ceeeEeeecCcchhhhhhhhhhhhhhccCC
Q psy16434 40 QTYQCLVCKNKTLFHDLAEGARHVERHHWD 69 (745)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (745)
.+|+|..|+.. |.....-.+|...|+.+
T Consensus 1 k~~~C~~C~~~--f~~~~~l~~H~~~h~~~ 28 (29)
T 2m0e_A 1 KEHKCPHCDKK--FNQVGNLKAHLKIHIAD 28 (29)
T ss_dssp CCCCCSSCCCC--CCTTTHHHHHHHHHHSC
T ss_pred CCCcCCCCCcc--cCCHHHHHHHHHHhccC
Confidence 37999999854 44444455777777654
No 262
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=33.21 E-value=13 Score=23.08 Aligned_cols=26 Identities=35% Similarity=0.735 Sum_probs=18.0
Q ss_pred ceeeEeeecCcchhhhhhhhhhhhhhcc
Q psy16434 40 QTYQCLVCKNKTLFHDLAEGARHVERHH 67 (745)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (745)
.+|+|..|+.. |.....-.+|+..|+
T Consensus 2 k~~~C~~C~k~--f~~~~~l~~H~~~h~ 27 (30)
T 2lvr_A 2 KPYVCIHCQRQ--FADPGALQRHVRIHT 27 (30)
Confidence 47999999753 555555567777765
No 263
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=27.09 E-value=23 Score=33.32 Aligned_cols=43 Identities=21% Similarity=0.470 Sum_probs=28.1
Q ss_pred cceeeE--eeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhcc--ccCcccc
Q psy16434 39 NQTYQC--LVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNL--CGNEYKF 94 (745)
Q Consensus 39 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 94 (745)
..+|+| ..|+.. |-....-.+|+..|+...| |.|.. ||..|..
T Consensus 102 ~~~~~C~~~~C~k~--f~~~~~L~~H~~~H~~~~~-----------~~C~~~~C~k~F~~ 148 (190)
T 1tf6_A 102 ICVYVCHFENCGKA--FKKHNQLKVHQFSHTQQLP-----------YECPHEGCDKRFSL 148 (190)
T ss_dssp TSCCEECSSSSCEE--CSSHHHHHHHHGGGSSSCS-----------SBCCSSSCCCBCSS
T ss_pred cceeeCCCCCCccc--cCCHHHHHHHHHHhCCCCC-----------ccCCCCCCCchhcC
Confidence 456788 777643 4444555677777776544 78877 8877654
No 264
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.81 E-value=15 Score=25.67 Aligned_cols=33 Identities=18% Similarity=0.248 Sum_probs=23.8
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|.+|+.. |-....-.+|+..|+-+.|
T Consensus 8 ~~~~~~~C~~C~k~--f~~~~~L~~H~~~H~~~k~ 40 (44)
T 2eou_A 8 AAKTTSECQECGKI--FRHSSLLIEHQALHAGESG 40 (44)
T ss_dssp SSSCCCCCTTTCCC--CSSHHHHHHHHHHHTTSCC
T ss_pred CCCcCeECCCCCcc--cCCHHHHHHHHHHHCCCCC
Confidence 34578999999864 4455556789988876655
No 265
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.19 E-value=21 Score=23.34 Aligned_cols=29 Identities=21% Similarity=0.327 Sum_probs=19.4
Q ss_pred ccceeeEeeecCcchhhhhhhhhhhhhhccC
Q psy16434 38 RNQTYQCLVCKNKTLFHDLAEGARHVERHHW 68 (745)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (745)
...+|+|..|+.. |-.-..-.+|...|+-
T Consensus 6 ~~k~~~C~~C~k~--f~~~~~l~~H~~~H~~ 34 (36)
T 2elt_A 6 SGKPYKCPQCSYA--SAIKANLNVHLRKHTG 34 (36)
T ss_dssp CCCSEECSSSSCE--ESSHHHHHHHHHHHTC
T ss_pred CCCCCCCCCCCcc--cCCHHHHHHHHHHccC
Confidence 3568999999754 4444445678777753
No 266
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=25.88 E-value=21 Score=21.96 Aligned_cols=26 Identities=19% Similarity=0.399 Sum_probs=17.7
Q ss_pred eeeEeeecCcchhhhhhhhhhhhhhccC
Q psy16434 41 TYQCLVCKNKTLFHDLAEGARHVERHHW 68 (745)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (745)
+|+|..|+.. |-....-.+|+..|+.
T Consensus 2 ~~~C~~C~k~--f~~~~~l~~H~~~H~~ 27 (29)
T 1rik_A 2 KFACPECPKR--FMRSDHLTLHILLHEN 27 (29)
T ss_dssp CEECSSSSCE--ESCSHHHHHHHTGGGS
T ss_pred CccCCCCCch--hCCHHHHHHHHHHhcC
Confidence 6999999864 4444445678777753
No 267
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=25.51 E-value=19 Score=32.35 Aligned_cols=44 Identities=18% Similarity=0.631 Sum_probs=30.8
Q ss_pred ccceeeEee--ecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhcc--ccCcccc
Q psy16434 38 RNQTYQCLV--CKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNL--CGNEYKF 94 (745)
Q Consensus 38 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 94 (745)
...+|+|.+ |+. .|-....-.+|+..|+-+.| |.|.. ||..|..
T Consensus 64 ~~~~~~C~~~~C~~--~f~~~~~l~~H~~~h~~~~~-----------~~C~~~~C~~~f~~ 111 (155)
T 2gli_A 64 GEKPHKCTFEGCRK--SYSRLENLKTHLRSHTGEKP-----------YMCEHEGCSKAFSN 111 (155)
T ss_dssp CCCCCCCCSTTCCC--CCSSHHHHHHHHHHTTTCCC-----------EECCSTTCCCEESS
T ss_pred CCCCccCCCCCCCC--cccCHHHHHHHHHHcCCCCC-----------eeCCCCCCCCccCC
Confidence 456899985 865 35555666788888875543 78988 8877653
No 268
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.25 E-value=13 Score=26.29 Aligned_cols=33 Identities=18% Similarity=0.432 Sum_probs=23.7
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
+...+|+|..|+.. |-....-.+|+..|+-+.|
T Consensus 8 ~~~k~~~C~~C~k~--f~~~~~L~~H~~~H~~~k~ 40 (46)
T 2emz_A 8 SGERPFKCNECGKG--FGRRSHLAGHLRLHSREKS 40 (46)
T ss_dssp SCCCSCCCSSSCCC--CSSHHHHHHHHHHHHHTTC
T ss_pred CCCCCeECCCCCcc--cCCHHHHHHHHHHhCCCCC
Confidence 34568999999764 5555556789988886655
No 269
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=24.58 E-value=20 Score=21.61 Aligned_cols=25 Identities=28% Similarity=0.604 Sum_probs=16.3
Q ss_pred eeeEeeecCcchhhhhhhhhhhhhhcc
Q psy16434 41 TYQCLVCKNKTLFHDLAEGARHVERHH 67 (745)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (745)
+|+|..|+.. |-....-.+|...|+
T Consensus 1 ~~~C~~C~k~--f~~~~~l~~H~~~h~ 25 (27)
T 1znf_A 1 XYKCGLCERS--FVEKSALSRHQRVHK 25 (27)
T ss_dssp -CBCSSSCCB--CSSHHHHHHHGGGTC
T ss_pred CccCCCCCCc--CCCHHHHHHHHHHcC
Confidence 5899999754 444445567877775
No 270
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=24.11 E-value=11 Score=31.14 Aligned_cols=44 Identities=23% Similarity=0.575 Sum_probs=25.4
Q ss_pred ceeeEeeecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCc
Q psy16434 40 QTYQCLVCKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNE 91 (745)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (745)
+.|+|.+|+- -+|-++|-.. +.-|..-..=-+.|.|.|..||-.
T Consensus 6 ~~y~C~vCGy---iYd~~~Gdp~-----~gi~pGT~f~~lPddw~CP~Cga~ 49 (70)
T 1dx8_A 6 GKYECEACGY---IYEPEKGDKF-----AGIPPGTPFVDLSDSFMCPACRSP 49 (70)
T ss_dssp SCEEETTTCC---EECTTTCCTT-----TTCCSSCCGGGSCTTCBCTTTCCB
T ss_pred ceEEeCCCCE---EEcCCCCCcc-----cCcCCCCchhhCCCCCcCCCCCCC
Confidence 5799999984 3565554321 111111111124677899999975
No 271
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=29.37 E-value=17 Score=22.01 Aligned_cols=24 Identities=29% Similarity=0.667 Sum_probs=14.6
Q ss_pred eeeEeeecCcchhhhhhhhhhhhhhc
Q psy16434 41 TYQCLVCKNKTLFHDLAEGARHVERH 66 (745)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 (745)
+|+|..|+.. |-.-..-.+|+..|
T Consensus 2 p~~C~~C~k~--f~~~~~l~~H~~~H 25 (26)
T 2lvu_A 2 PYVCERCGKR--FVQSSQLANHIRHH 25 (26)
Confidence 7999999753 33333344565554
No 272
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=23.11 E-value=31 Score=27.20 Aligned_cols=32 Identities=22% Similarity=0.389 Sum_probs=24.2
Q ss_pred ccceeeEeeecCcchhhhhhhhhhhhhhccCCCC
Q psy16434 38 RNQTYQCLVCKNKTLFHDLAEGARHVERHHWDQP 71 (745)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (745)
...+|+|.+|... |-....-.+|+..|+-+.|
T Consensus 43 ~~~~~~C~~C~~~--f~~~~~L~~H~~~H~~~~p 74 (77)
T 2cot_A 43 GEKPYKCDECGKA--FIQRSHLIGHHRVHTGSGP 74 (77)
T ss_dssp CSCSEECSSSCCE--ESSHHHHHHHGGGSCCCCC
T ss_pred CCcCeeCCCCCCc--cCCHHHHHHHHHHhCCCCC
Confidence 3568999999864 5555666789999987765
No 273
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=22.64 E-value=19 Score=22.00 Aligned_cols=27 Identities=22% Similarity=0.423 Sum_probs=18.3
Q ss_pred ceeeEeeecCcchhhhhhhhhhhhhhccC
Q psy16434 40 QTYQCLVCKNKTLFHDLAEGARHVERHHW 68 (745)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (745)
.+|+|..|+.. |.....-.+|...|+-
T Consensus 1 ~~~~C~~C~k~--f~~~~~l~~H~~~H~~ 27 (29)
T 2m0f_A 1 GPLKCRECGKQ--FTTSGNLKRHLRIHSG 27 (29)
T ss_dssp CCEECTTTSCE--ESCHHHHHHHHHHHHT
T ss_pred CCccCCCCCCc--cCChhHHHHHHHHhcC
Confidence 37999999753 5555555678777753
No 274
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=22.49 E-value=30 Score=28.44 Aligned_cols=45 Identities=16% Similarity=0.459 Sum_probs=32.0
Q ss_pred eccceeeEee--ecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhc--cccCcccc
Q psy16434 37 TRNQTYQCLV--CKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCN--LCGNEYKF 94 (745)
Q Consensus 37 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 94 (745)
.....|+|.. |.. .|.....-.+|+..|+...| |.|. .||..|..
T Consensus 11 ~~~~~~~C~~~~C~~--~f~~~~~l~~H~~~h~~~~~-----------~~C~~~~C~~~f~~ 59 (100)
T 2ebt_A 11 EKRRIHYCDYPGCTK--VYTKSSHLKAHLRTHTGEKP-----------YKCTWEGCDWRFAR 59 (100)
T ss_dssp CSCCCEECCSSSCCC--EESCHHHHHHHHHHHSCCCC-----------EECCSSSCCCEESS
T ss_pred ccCcceEcCCCCCCC--cccCHHHHHHHHHHhCCCCC-----------eeCCCCCCCCccCC
Confidence 3456799997 965 45555666789998876544 7896 69987654
No 275
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=21.86 E-value=20 Score=26.02 Aligned_cols=34 Identities=18% Similarity=0.490 Sum_probs=21.3
Q ss_pred eccceeeEeeecCcchhhhhhhhhhhhh-hccCCCCC
Q psy16434 37 TRNQTYQCLVCKNKTLFHDLAEGARHVE-RHHWDQPD 72 (745)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 72 (745)
+...+|+|.+|+.. |-....-.+|+. .|..+.+.
T Consensus 3 t~~kp~~C~~C~k~--F~~~~~L~~H~~~~H~~e~~~ 37 (48)
T 3iuf_A 3 DRDKPYACDICGKR--YKNRPGLSYHYAHSHLAEEEG 37 (48)
T ss_dssp TTTSCEECTTTCCE--ESSHHHHHHHHHHSSCC----
T ss_pred CCCcCEECCCcCcc--cCCHHHHHHHhhhhcCCCCCC
Confidence 34578999999844 444555578988 77766554
No 276
>1pqv_S STP-alpha, transcription elongation factor S-II, DNA; mRNA cleavage, proofreading, BACKTRACKING, gene expression, multiprotein complex; 3.80A {Saccharomyces cerevisiae} SCOP: i.8.1.1 PDB: 1eo0_A
Probab=21.45 E-value=24 Score=37.19 Aligned_cols=40 Identities=28% Similarity=0.676 Sum_probs=25.4
Q ss_pred eeeEeeecCcc-hhhhhhhhhhhhhhccCCCCCCCceEEeecchhhccccCcccc
Q psy16434 41 TYQCLVCKNKT-LFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNLCGNEYKF 94 (745)
Q Consensus 41 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (745)
.++|..|+.+. .|.+ ...+.....-.+|+. |..||+.|+|
T Consensus 268 ~~~C~~C~~~~~~~~q---------~Q~rsaDe~~t~f~~-----C~~Cg~~w~f 308 (309)
T 1pqv_S 268 RFTCGKCKEKKVSYYQ---------LQTRSADEPLTTFCT-----CEACGNRWKF 308 (309)
T ss_pred cccCCCCCCCeeEEEE---------eecccCCCCCcEEEE-----eCCCCCceec
Confidence 48999999653 3333 223333333456754 9999999988
No 277
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=21.35 E-value=27 Score=32.78 Aligned_cols=42 Identities=26% Similarity=0.467 Sum_probs=31.7
Q ss_pred eccceeeEee--ecCcchhhhhhhhhhhhhhccCCCCCCCceEEeecchhhcc---ccCcccc
Q psy16434 37 TRNQTYQCLV--CKNKTLFHDLAEGARHVERHHWDQPDKNSLFVISDRFLCNL---CGNEYKF 94 (745)
Q Consensus 37 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 94 (745)
+...+|+|.+ |+.. |-....-.+|+..|+. |.|.. ||..|+-
T Consensus 130 ~~~~~~~C~~~~C~k~--F~~~~~L~~H~~~H~~--------------~~C~~~~~C~~~f~~ 176 (190)
T 1tf6_A 130 TQQLPYECPHEGCDKR--FSLPSRLKRHEKVHAG--------------YPCKKDDSCSFVGKT 176 (190)
T ss_dssp SSSCSSBCCSSSCCCB--CSSHHHHHHHHTSSCS--------------CCCCSTTTCCCCCSC
T ss_pred CCCCCccCCCCCCCch--hcCHHHHHHHHHHhCC--------------CcCCCCCcCCCcccc
Confidence 3456899988 9854 5566666789988874 78999 9987653
No 278
>3tny_A YFIY (ABC transport system substrate-binding PROT; schizokinen, nutrient binding protein, ABC transporter, metal transport; HET: SKZ; 1.55A {Bacillus cereus}
Probab=20.38 E-value=82 Score=31.96 Aligned_cols=52 Identities=13% Similarity=0.140 Sum_probs=39.6
Q ss_pred HHHHHHcCCcEEEeCCcccHHHHHHHHHcCCeEEEeCC----HHHHHHHHHHhCCe
Q psy16434 648 IKAIADTGANVVVAGAKFGDMALHYLNKYGLMGVRLNS----KFDLRRLCKAVNAT 699 (745)
Q Consensus 648 V~~I~~~gvnVVl~~~~I~d~al~~L~k~gIl~ir~v~----k~dLeRIaraTGA~ 699 (745)
+++|++++|||||......+.....|.+-++.++..-. .+.++.+++++|..
T Consensus 89 ~E~I~~l~PDLIi~~~~~~~~~~~~l~~i~p~v~~~~~~~~~~~~i~~lg~~~g~e 144 (303)
T 3tny_A 89 VETIASLKPDLIIGNKMRHEKVYEQLKAIAPTVFSETLRGEWKDNFKFYAKALNKE 144 (303)
T ss_dssp HHHHHHTCCSEEEEEHHHHGGGHHHHHTTSCEEEECCCTTCHHHHHHHHHHHTTCH
T ss_pred HHHHHcCCCCEEEEeccchHHHHHHhhcCCcEEEeccCcccHHHHHHHHHHHhCch
Confidence 57788999999998776666666778888887775443 34678899999864
Done!