BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16435
(277 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9BXF3|CECR2_HUMAN Cat eye syndrome critical region protein 2 OS=Homo sapiens GN=CECR2
PE=1 SV=2
Length = 1484
Score = 112 bits (280), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 75/109 (68%), Gaps = 2/109 (1%)
Query: 113 MHKVMNRLKSHEDAWPFCDPVDEATAPNYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRAD 172
M+KV++ +K+H+D+WPF +PVDE+ APNYY+ IK PMD++ ME+KL+ G Y T +F D
Sbjct: 443 MYKVLDVVKAHKDSWPFLEPVDESYAPNYYQIIKAPMDISSMEKKLNGGLYCTKEEFVND 502
Query: 173 FQLIVDNCRKYNGLDNEYTDMVRRLQQIFRDAVSRYLDGERSSGSEDEE 221
+ + NCRKYNG +EYT M L++ F A+ ++ GE G DEE
Sbjct: 503 MKTMFRNCRKYNGESSEYTKMSDNLERCFHRAMMKHFPGE--DGDTDEE 549
>sp|Q6CXW4|GCN5_KLULA Histone acetyltransferase GCN5 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=GCN5 PE=3 SV=1
Length = 516
Score = 92.0 bits (227), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 55/94 (58%)
Query: 112 GMHKVMNRLKSHEDAWPFCDPVDEATAPNYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRA 171
M ++ L++H AWPF PV++ P+YYE IK PMDL+ ME KL+ RY+ F
Sbjct: 412 AMQNLLTELQNHAAAWPFLQPVNKEEVPDYYEFIKEPMDLSSMEMKLNGNRYEKMENFIY 471
Query: 172 DFQLIVDNCRKYNGLDNEYTDMVRRLQQIFRDAV 205
D +LI +NCR YNG + Y RL++ F V
Sbjct: 472 DARLIFNNCRAYNGENTSYFKYANRLEKFFNSKV 505
>sp|Q756G9|GCN5_ASHGO Histone acetyltransferase GCN5 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=GCN5
PE=3 SV=1
Length = 452
Score = 88.6 bits (218), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 53/89 (59%)
Query: 113 MHKVMNRLKSHEDAWPFCDPVDEATAPNYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRAD 172
M V+ L++H AWPF PV+ P+YYE IK PMDL+ ME KL+ RY+ F D
Sbjct: 349 MQNVLTELQNHAAAWPFLQPVNRDEVPDYYEFIKEPMDLSTMEIKLENNRYEKMEDFIYD 408
Query: 173 FQLIVDNCRKYNGLDNEYTDMVRRLQQIF 201
+LI +NCR YNG + Y RL++ F
Sbjct: 409 ARLIFNNCRAYNGENTSYFKYANRLEKFF 437
>sp|Q03330|GCN5_YEAST Histone acetyltransferase GCN5 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=GCN5 PE=1 SV=1
Length = 439
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 57/94 (60%)
Query: 112 GMHKVMNRLKSHEDAWPFCDPVDEATAPNYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRA 171
+ ++ L++H AWPF PV++ P+YY+ IK PMDL+ ME KL++ +Y+ F
Sbjct: 335 AIQNILTELQNHAAAWPFLQPVNKEEVPDYYDFIKEPMDLSTMEIKLESNKYQKMEDFIY 394
Query: 172 DFQLIVDNCRKYNGLDNEYTDMVRRLQQIFRDAV 205
D +L+ +NCR YNG + Y RL++ F + V
Sbjct: 395 DARLVFNNCRMYNGENTSYYKYANRLEKFFNNKV 428
>sp|Q12830|BPTF_HUMAN Nucleosome-remodeling factor subunit BPTF OS=Homo sapiens GN=BPTF
PE=1 SV=3
Length = 3046
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Query: 105 TEEDLRIGMHKVMNRLKSHEDAWPFCDPVDEATAPNYYEQIKRPMDLTRMEEKLDAGRYK 164
TE+D G+ +V+ L++H+ AWPF +PVD AP+YY IK PMDL MEE++ Y+
Sbjct: 2929 TEKDYE-GLKRVLRSLQAHKMAWPFLEPVDPNDAPDYYGVIKEPMDLATMEERVQRRYYE 2987
Query: 165 TFGQFRADFQLIVDNCRKYNGLDNEYTDMVRRLQQIF 201
+F AD I DNCR YN D+ + L+ F
Sbjct: 2988 KLTEFVADMTKIFDNCRYYNPSDSPFYQCAEVLESFF 3024
>sp|Q6FTW5|GCN5_CANGA Histone acetyltransferase GCN5 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=GCN5 PE=3 SV=1
Length = 546
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 57/94 (60%)
Query: 112 GMHKVMNRLKSHEDAWPFCDPVDEATAPNYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRA 171
+ ++ L++H AWPF PV++ P+YYE IK PMDL+ ME KL+ +Y+ +F
Sbjct: 442 AIQNILVELQNHAAAWPFLRPVNKEEVPDYYEFIKEPMDLSTMELKLENNKYEKMEEFIY 501
Query: 172 DFQLIVDNCRKYNGLDNEYTDMVRRLQQIFRDAV 205
D +L+ +NCR YNG + Y RL++ F + V
Sbjct: 502 DARLVCNNCRLYNGENTSYYKYANRLEKFFNNKV 535
>sp|Q9JHD2|KAT2A_MOUSE Histone acetyltransferase KAT2A OS=Mus musculus GN=Kat2a PE=2 SV=2
Length = 830
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 58/95 (61%)
Query: 107 EDLRIGMHKVMNRLKSHEDAWPFCDPVDEATAPNYYEQIKRPMDLTRMEEKLDAGRYKTF 166
+ L + ++ ++KSH AWPF +PV ++ AP+YYE I+ P+DL M E+L + Y T
Sbjct: 724 DQLYTTLKNLLAQIKSHPSAWPFMEPVKKSEAPDYYEVIRFPIDLKTMTERLRSRYYVTR 783
Query: 167 GQFRADFQLIVDNCRKYNGLDNEYTDMVRRLQQIF 201
F AD Q ++ NCR+YN D+EY L++ F
Sbjct: 784 KLFVADLQRVIANCREYNPPDSEYCRCASALEKFF 818
>sp|Q92830|KAT2A_HUMAN Histone acetyltransferase KAT2A OS=Homo sapiens GN=KAT2A PE=1 SV=3
Length = 837
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 58/95 (61%)
Query: 107 EDLRIGMHKVMNRLKSHEDAWPFCDPVDEATAPNYYEQIKRPMDLTRMEEKLDAGRYKTF 166
+ L + ++ ++KSH AWPF +PV ++ AP+YYE I+ P+DL M E+L + Y T
Sbjct: 731 DQLYTTLKNLLAQIKSHPSAWPFMEPVKKSEAPDYYEVIRFPIDLKTMTERLRSRYYVTR 790
Query: 167 GQFRADFQLIVDNCRKYNGLDNEYTDMVRRLQQIF 201
F AD Q ++ NCR+YN D+EY L++ F
Sbjct: 791 KLFVADLQRVIANCREYNPPDSEYCRCASALEKFF 825
>sp|Q9W0T1|NU301_DROME Nucleosome-remodeling factor subunit NURF301 OS=Drosophila
melanogaster GN=E(bx) PE=1 SV=2
Length = 2669
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%)
Query: 113 MHKVMNRLKSHEDAWPFCDPVDEATAPNYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRAD 172
+ ++ +++ H+ AWPF +PVD AP+YY+ IK PMDL RME KL++ Y +F D
Sbjct: 2565 LKNLIKQMQLHKSAWPFMEPVDPKEAPDYYKVIKEPMDLKRMEIKLESNTYTKLSEFIGD 2624
Query: 173 FQLIVDNCRKYNGLDNEYTDMVRRLQQIFRDAVSRY 208
I DNCR YN ++ + L+ F + +
Sbjct: 2625 MTKIFDNCRYYNPKESSFYKCAEALESYFVQKIKNF 2660
>sp|Q8WZM0|GCN5_YARLI Histone acetyltransferase GCN5 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=GCN5 PE=3 SV=1
Length = 464
Score = 81.3 bits (199), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 53/88 (60%)
Query: 113 MHKVMNRLKSHEDAWPFCDPVDEATAPNYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRAD 172
M V++ L++H AWPF V+ P+YYE IK PMDL+ ME++L+A YKT +F D
Sbjct: 361 MQHVLSELQNHASAWPFAQAVNRDEVPDYYEVIKEPMDLSTMEQRLEADSYKTMEEFVYD 420
Query: 173 FQLIVDNCRKYNGLDNEYTDMVRRLQQI 200
+L+ +NCR YN Y +L++
Sbjct: 421 ARLVFNNCRAYNNETTTYYKNANKLEKF 448
>sp|Q6BGW1|GCN5_DEBHA Histone acetyltransferase GCN5 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=GCN5 PE=3 SV=2
Length = 455
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 58/104 (55%), Gaps = 6/104 (5%)
Query: 113 MHKVMNRLKSHEDAWPFCDPVDEATAPNYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRAD 172
M +++ L +H AWPF PV++ +YY+ IK PMDL+ ME KL+ +Y +F QF D
Sbjct: 351 MVTLLSELTNHPSAWPFSTPVNKEEVGDYYDVIKEPMDLSTMESKLENDKYDSFDQFLYD 410
Query: 173 FQLIVDNCRKYNGLDNEYTDMVRRLQQIFRDAV------SRYLD 210
+LI +NCR YN Y +L++ + + S +LD
Sbjct: 411 ARLIFNNCRSYNADSTTYFKNATKLEKFMNNKIKDSAEYSHFLD 454
>sp|Q92831|KAT2B_HUMAN Histone acetyltransferase KAT2B OS=Homo sapiens GN=KAT2B PE=1 SV=3
Length = 832
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 53/93 (56%)
Query: 113 MHKVMNRLKSHEDAWPFCDPVDEATAPNYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRAD 172
+ ++ ++KSH+ AWPF +PV AP YYE I+ PMDL M E+L Y + F AD
Sbjct: 732 LKSILQQVKSHQSAWPFMEPVKRTEAPGYYEVIRFPMDLKTMSERLKNRYYVSKKLFMAD 791
Query: 173 FQLIVDNCRKYNGLDNEYTDMVRRLQQIFRDAV 205
Q + NC++YN ++EY L++ F +
Sbjct: 792 LQRVFTNCKEYNPPESEYYKCANILEKFFFSKI 824
>sp|Q9JHD1|KAT2B_MOUSE Histone acetyltransferase KAT2B OS=Mus musculus GN=Kat2b PE=1 SV=2
Length = 813
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 55/99 (55%)
Query: 107 EDLRIGMHKVMNRLKSHEDAWPFCDPVDEATAPNYYEQIKRPMDLTRMEEKLDAGRYKTF 166
E L + ++ ++K+H +AWPF +PV AP YYE I+ PMDL M E+L Y +
Sbjct: 707 EQLYSTLKNILQQVKNHPNAWPFMEPVKRTEAPGYYEVIRFPMDLKTMSERLRNRYYVSK 766
Query: 167 GQFRADFQLIVDNCRKYNGLDNEYTDMVRRLQQIFRDAV 205
F AD Q + NC++YN ++EY L++ F +
Sbjct: 767 KLFMADLQRVFTNCKEYNPPESEYYKCASILEKFFFSKI 805
>sp|Q58F21|BRDT_HUMAN Bromodomain testis-specific protein OS=Homo sapiens GN=BRDT PE=1
SV=4
Length = 947
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 126 AWPFCDPVDEATAP--NYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRADFQLIVDNCRKY 183
AWPF +PVD NYY+ +K PMDL ++EK+D YK +F AD +L+ NC KY
Sbjct: 292 AWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYKDAYKFAADVRLMFMNCYKY 351
Query: 184 NGLDNEYTDMVRRLQQIFRDAVSR 207
N D+E M R LQ +F S+
Sbjct: 352 NPPDHEVVTMARMLQDVFETHFSK 375
Score = 60.8 bits (146), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 116 VMNRLKSHEDAWPFCDPVDEA--TAPNYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRADF 173
V+ L H +WPF PVD P+YY IK PMDL ++++L+ Y + DF
Sbjct: 39 VLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDF 98
Query: 174 QLIVDNCRKYNGLDNEYTDMVRRLQQIFRDAVSRYLDGERSSG 216
+ NC YN ++ M + L+++F +S+ E+ G
Sbjct: 99 NTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQMPQEEQVVG 141
>sp|P35817|BDF1_YEAST Bromodomain-containing factor 1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=BDF1 PE=1 SV=3
Length = 686
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 69/148 (46%), Gaps = 22/148 (14%)
Query: 115 KVMNRLKSHEDAWPFCDPVDEAT--APNYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRAD 172
K + RLK DA PF PVD P Y+ IKRPMDL+ +E KL+ G Y+ Q D
Sbjct: 162 KAVKRLK---DARPFLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITED 218
Query: 173 FQLIVDNCRKYNGLDNEYTDMVRRLQQIF---------RDAVSRYLDGERSSGSEDEEEM 223
F L+V+N K+NG + + M R +Q F +DA G RSS ED +
Sbjct: 219 FNLMVNNSIKFNGPNAGISQMARNIQASFEKHMLNMPAKDAPPVIAKGRRSSAQEDAPIV 278
Query: 224 AVEFQEELPPKPKGKRGRKKKIVLSPRS 251
Q GR K+ + P+S
Sbjct: 279 IRRAQTH--------NGRPKRTIHPPKS 298
Score = 57.8 bits (138), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 127 WPFCDPVDEATA--PNYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRADFQLIVDNCRKYN 184
+PF +PVD + P Y++ +K PMDL + +KL+ +Y+T F D +L+ NC +N
Sbjct: 338 YPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQYQTMEDFERDVRLVFKNCYTFN 397
Query: 185 GLDNEYTDMVRRLQQIF 201
M RL+++F
Sbjct: 398 PDGTIVNMMGHRLEEVF 414
>sp|Q4R8Y1|BRDT_MACFA Bromodomain testis-specific protein OS=Macaca fascicularis GN=BRDT
PE=2 SV=3
Length = 947
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 126 AWPFCDPVDEATAP--NYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRADFQLIVDNCRKY 183
AWPF +PVD NYY+ +K PMDL ++EK+D YK +F AD +L+ NC KY
Sbjct: 292 AWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYKDAYKFAADVRLMFMNCYKY 351
Query: 184 NGLDNEYTDMVRRLQQIFRDAVSR 207
N D+E M R LQ +F S+
Sbjct: 352 NPPDHEVVTMARMLQDVFETHFSK 375
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Query: 116 VMNRLKSHEDAWPFCDPVDEATA--PNYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRADF 173
V+ L H +WPF PVD P+YY IK PMDL ++++L+ Y + DF
Sbjct: 39 VLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYVKASECIEDF 98
Query: 174 QLIVDNCRKYNGLDNEYTDMVRRLQQIFRDAVSRYLDGERSSGSED 219
+ NC YN ++ M + L+++F +S+ E+ G ++
Sbjct: 99 NTMFSNCYLYNKPGDDIVLMAQALEKLFVQKLSQMPQEEQVVGGKE 144
>sp|Q9UIF8|BAZ2B_HUMAN Bromodomain adjacent to zinc finger domain protein 2B OS=Homo sapiens
GN=BAZ2B PE=1 SV=3
Length = 2168
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%)
Query: 116 VMNRLKSHEDAWPFCDPVDEATAPNYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRADFQL 175
++ +++HEDAWPF PV+ P Y + IK+PMD + + EKL +G+Y F D +L
Sbjct: 2072 ILTEMETHEDAWPFLLPVNLKLVPGYKKVIKKPMDFSTIREKLSSGQYPNLETFALDVRL 2131
Query: 176 IVDNCRKYN 184
+ DNC +N
Sbjct: 2132 VFDNCETFN 2140
>sp|Q9DE13|BAZ2B_CHICK Bromodomain adjacent to zinc finger domain protein 2B OS=Gallus
gallus GN=BAZ2B PE=2 SV=1
Length = 2130
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 103 RSTEEDLRIGMHKVMNRLKSHEDAWPFCDPVDEATAPNYYEQIKRPMDLTRMEEKLDAGR 162
R +DL I +++ L++HEDAWPF PV+ P Y + IK+PMD + + +KL +G+
Sbjct: 2022 RDDSKDLAI-CSMILSELETHEDAWPFLLPVNLKLVPGYKKVIKKPMDFSTIRDKLTSGQ 2080
Query: 163 YKTFGQFRADFQLIVDNCRKYN 184
Y F D +L+ DNC +N
Sbjct: 2081 YPNVEAFSLDVRLVFDNCETFN 2102
>sp|P51123|TAF1_DROME Transcription initiation factor TFIID subunit 1 OS=Drosophila
melanogaster GN=Taf1 PE=1 SV=3
Length = 2129
Score = 74.7 bits (182), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 53/89 (59%)
Query: 109 LRIGMHKVMNRLKSHEDAWPFCDPVDEATAPNYYEQIKRPMDLTRMEEKLDAGRYKTFGQ 168
L K+ +++K ++WPF PV++ +YY IKRPMDL + + ++A RY + +
Sbjct: 1597 LSFIFDKLHSQIKQLPESWPFLKPVNKKQVKDYYTVIKRPMDLETIGKNIEAHRYHSRAE 1656
Query: 169 FRADFQLIVDNCRKYNGLDNEYTDMVRRL 197
+ AD +LI NC +YNG D YT +++
Sbjct: 1657 YLADIELIATNCEQYNGSDTRYTKFSKKI 1685
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 42/82 (51%)
Query: 116 VMNRLKSHEDAWPFCDPVDEATAPNYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRADFQL 175
+ N L+S D PF PV P+YY + +PMDL M E + RY + F D +
Sbjct: 1482 IHNELRSMPDVSPFLFPVSAKKVPDYYRVVTKPMDLQTMREYIRQRRYTSREMFLEDLKQ 1541
Query: 176 IVDNCRKYNGLDNEYTDMVRRL 197
IVDN YNG + YT +R+
Sbjct: 1542 IVDNSLIYNGPQSAYTLAAQRM 1563
>sp|D4A7T3|BRDT_RAT Bromodomain testis-specific protein OS=Rattus norvegicus GN=Brdt
PE=1 SV=1
Length = 952
Score = 74.7 bits (182), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 126 AWPFCDPVD--EATAPNYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRADFQLIVDNCRKY 183
AWPF +PVD NYY+ +K PMDL ++ K+D YK +F AD +L+ NC KY
Sbjct: 291 AWPFYNPVDVDALGLHNYYDIVKNPMDLGTIKGKMDKQEYKDACEFAADVRLMFMNCYKY 350
Query: 184 NGLDNEYTDMVRRLQQIF 201
N D+E M R LQ +F
Sbjct: 351 NPPDHEVVTMARMLQDVF 368
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 2/106 (1%)
Query: 116 VMNRLKSHEDAWPFCDPVDEATA--PNYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRADF 173
V+ L H +WPF PVD A P+YY I+ PMDL+ ++++L+ Y+ + DF
Sbjct: 38 VLKALWKHSFSWPFQQPVDAAKLKLPDYYTIIETPMDLSTIKKRLENRYYEKASECVGDF 97
Query: 174 QLIVDNCRKYNGLDNEYTDMVRRLQQIFRDAVSRYLDGERSSGSED 219
+ NC YN ++ M + L+++F +S+ E+ G ++
Sbjct: 98 NTMFSNCYLYNKPGDDIVVMAQALEKLFMQKLSQMPQEEQIVGGKE 143
>sp|Q91Y44|BRDT_MOUSE Bromodomain testis-specific protein OS=Mus musculus GN=Brdt PE=1
SV=3
Length = 956
Score = 74.3 bits (181), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 126 AWPFCDPVDEATAP--NYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRADFQLIVDNCRKY 183
AWPF +PVD NYY+ +K PMDL ++ K+D YK +F AD +L+ NC KY
Sbjct: 291 AWPFYNPVDADALGLHNYYDVVKNPMDLGTIKGKMDNQEYKDAYEFAADVRLMFMNCYKY 350
Query: 184 NGLDNEYTDMVRRLQQIF 201
N D+E M R LQ +F
Sbjct: 351 NPPDHEVVAMARTLQDVF 368
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 66/128 (51%), Gaps = 9/128 (7%)
Query: 116 VMNRLKSHEDAWPFCDPVDEATA--PNYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRADF 173
V+ L H +WPF PVD P+YY IK PMDL ++++L+ Y+ + DF
Sbjct: 38 VLKALWKHGFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLENKYYEKASECIEDF 97
Query: 174 QLIVDNCRKYNGLDNEYTDMVRRLQQIFRDAVSRYLDGERSSGSED------EEEMAV-E 226
+ NC YN ++ M + L+++F +S+ E+ G ++ ++++AV
Sbjct: 98 NTMFSNCYLYNKTGDDIVVMAQALEKLFMQKLSQMPQEEQVVGGKERIKKDIQQKIAVSS 157
Query: 227 FQEELPPK 234
+E++P K
Sbjct: 158 AKEQIPSK 165
>sp|Q54UW4|Y0777_DICDI Bromodomain-containing protein DDB_G0280777 OS=Dictyostelium
discoideum GN=DDB_G0280777 PE=4 SV=1
Length = 1823
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 65/115 (56%), Gaps = 2/115 (1%)
Query: 72 RERGSRSNSEDRWTTEDTSSLCSYQTSTGGYRS-TEEDLRIGMHKVMNRLKSHED-AWPF 129
++R SR+ S +R + + G +S +E++ + V+N+LK + D ++PF
Sbjct: 273 KKRNSRTTSINRVFRSLLTDVKVPAKKFNGLKSEAQEEMYDQLDTVLNQLKDYSDHSFPF 332
Query: 130 CDPVDEATAPNYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRADFQLIVDNCRKYN 184
V + APNYYE IK+PMDL+ M +KL Y++ +F+ D LI NCR YN
Sbjct: 333 LTKVRPSEAPNYYEIIKKPMDLSLMTKKLKKLEYQSKFEFQLDLNLIFTNCRIYN 387
>sp|Q338B9|GCN5_ORYSJ Histone acetyltransferase GCN5 OS=Oryza sativa subsp. japonica
GN=GCN5 PE=2 SV=1
Length = 511
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 6/131 (4%)
Query: 80 SEDRWTTEDTSSLCSYQTSTGGYRSTEEDLRIGMHKVMNRLKSHEDAWPFCDPVDEATAP 139
+ D+W + S S ST YR +L M ++ + H DAWPF +PVD P
Sbjct: 379 TPDQWGHSKSRSAFSPDYST--YRQQLTNL---MRSLLKNMNEHPDAWPFKEPVDSRDVP 433
Query: 140 NYYEQIKRPMDLTRMEEKLDAGR-YKTFGQFRADFQLIVDNCRKYNGLDNEYTDMVRRLQ 198
+YY+ IK P+DL M +++++ + Y T F AD + + N + YN D Y RL+
Sbjct: 434 DYYDIIKDPIDLKTMSKRVESEQYYVTLEMFVADMKRMFSNAKTYNSPDTIYYKCASRLE 493
Query: 199 QIFRDAVSRYL 209
F + V+ L
Sbjct: 494 SFFSNKVASQL 504
>sp|Q9UUK2|GCN5_SCHPO Histone acetyltransferase gcn5 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=gcn5 PE=1 SV=1
Length = 454
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 52/90 (57%)
Query: 113 MHKVMNRLKSHEDAWPFCDPVDEATAPNYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRAD 172
+ + +++H +WPF PV + P+YYE I+ PMDL+ ME +L +Y++ +F D
Sbjct: 352 LEMLFTEMQNHPSSWPFMQPVSKEDVPDYYEVIEHPMDLSTMEFRLRNNQYESVEEFIRD 411
Query: 173 FQLIVDNCRKYNGLDNEYTDMVRRLQQIFR 202
+ I DNCR YN + Y RL++ F+
Sbjct: 412 AKYIFDNCRSYNDSNTTYYKNADRLEKFFQ 441
>sp|O60885|BRD4_HUMAN Bromodomain-containing protein 4 OS=Homo sapiens GN=BRD4 PE=1 SV=2
Length = 1362
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 64/124 (51%), Gaps = 9/124 (7%)
Query: 112 GMHKVMNRLKSHEDAWPFCDPVD-EATAPN-YYEQIKRPMDLTRMEEKLDAGRYKTFGQF 169
G+ K M K AWPF PVD EA + Y + IK PMD++ ++ KL+A Y+ +F
Sbjct: 359 GILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQEF 418
Query: 170 RADFQLIVDNCRKYNGLDNEYTDMVRRLQQIFRDAVSRYLDGERSSGSEDEEEMAVEFQE 229
AD +L+ NC KYN D+E M R+LQ +F ++ D E EE +
Sbjct: 419 GADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD-------EPEEPVVAVSSP 471
Query: 230 ELPP 233
+PP
Sbjct: 472 AVPP 475
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 18/137 (13%)
Query: 109 LRIGMHKVMNRLKSHEDAWPFCDPVDEA--TAPNYYEQIKRPMDLTRMEEKLDAGRYKTF 166
L+ + V+ L H+ AWPF PVD P+YY+ IK PMD+ ++++L+ Y
Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNA 122
Query: 167 GQFRADFQLIVDNCRKYNGLDNEYTDMVRRLQQIFRDAVSRYLDGERSSGSEDEEEMAVE 226
+ DF + NC YN ++ M L+++F ++ +E+ E M V+
Sbjct: 123 QECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINEL-------PTEETEIMIVQ 175
Query: 227 FQEELPPKPKGK-RGRK 242
KG+ RGRK
Sbjct: 176 A--------KGRGRGRK 184
>sp|B7ZS37|BAZ2A_XENLA Bromodomain adjacent to zinc finger domain protein 2A OS=Xenopus
laevis GN=baz2a PE=2 SV=1
Length = 1698
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 101 GYRSTEEDLRIGMHKVMNRLKSHEDAWPFCDPVDEATAPNYYEQIKRPMDLTRMEEKLDA 160
G RS DL ++ L+SHEDAWPF +PV+ P Y + IK PMD + M KL
Sbjct: 1583 GTRSQSPDLTF-CEIILMELESHEDAWPFLEPVNPRLVPGYRKIIKNPMDFSTMRHKLLN 1641
Query: 161 GRYKTFGQFRADFQLIVDNCRKYN 184
G Y +F D +LI NC+ +N
Sbjct: 1642 GNYSRCEEFAEDAELIFSNCQLFN 1665
>sp|Q9AR19|GCN5_ARATH Histone acetyltransferase GCN5 OS=Arabidopsis thaliana GN=HAG1 PE=1
SV=1
Length = 568
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Query: 104 STEEDLRIGMHKVMNRLKSHEDAWPFCDPVDEATAPNYYEQIKRPMDLTRMEEKLDAGR- 162
+ ++ L M ++ ++ H DAWPF +PVD P+YY+ IK P+DL + +++++ +
Sbjct: 455 TNQKQLNALMRALLKTMQDHADAWPFKEPVDSRDVPDYYDIIKDPIDLKVIAKRVESEQY 514
Query: 163 YKTFGQFRADFQLIVDNCRKYNGLDNEYTDMVRRLQQIFRDAV 205
Y T F AD + + +NCR YN D Y RL+ F V
Sbjct: 515 YVTLDMFVADARRMFNNCRTYNSPDTIYYKCATRLETHFHSKV 557
>sp|Q07442|BDF2_YEAST Bromodomain-containing factor 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=BDF2 PE=1 SV=1
Length = 638
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 115 KVMNRLKSHEDAWPFCDPVDEAT--APNYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRAD 172
K RLK DA PF PVD P+Y+ ++ PMDL+ +E KL Y + Q +D
Sbjct: 147 KATKRLK---DARPFLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSD 203
Query: 173 FQLIVDNCRKYNGLDNEYTDMVRRLQQIFRDAVS 206
F+ +VDNC +NG ++ + M +R+Q+ F +S
Sbjct: 204 FKTMVDNCLNFNGPESSISSMAKRIQKYFEKKLS 237
Score = 67.8 bits (164), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 102 YRSTEEDLRIGMHKVMNRLKSHEDAWPFCDPVDEATA--PNYYEQIKRPMDLTRMEEKLD 159
+R+ + L++ M K K+ + +PF PVD PNY++ +K PMDL + L
Sbjct: 323 FRTCLKILKVLMSK-----KNSDINFPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLM 377
Query: 160 AGRYKTFGQFRADFQLIVDNCRKYNGLDNEYTDMVRRLQQIF 201
+YKT QF D L+ NC ++N NE M ++L+++F
Sbjct: 378 NWKYKTIDQFVDDLNLVFYNCFQFNPEGNEVHSMGKKLKELF 419
>sp|Q15059|BRD3_HUMAN Bromodomain-containing protein 3 OS=Homo sapiens GN=BRD3 PE=1 SV=1
Length = 726
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 22/162 (13%)
Query: 116 VMNRLKSHEDAWPFCDPVD--EATAPNYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRADF 173
V+ L H+ AWPF PVD + P+Y++ IK PMD+ ++++L+ Y + + DF
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 174 QLIVDNCRKYNGLDNEYTDMVRRLQQIFRDAVSRYLDGERSSGSEDEEEMAVEFQEELPP 233
+ NC YN ++ M + L++IF V+ +M E E LPP
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVA---------------QMPQEEVELLPP 150
Query: 234 KPKGKRGRKKKIVLSPRSLTPTDEEEDKENEEKSGTPFDSIP 275
PKGK GRK + + + ++ + TPF S+P
Sbjct: 151 APKGK-GRKP----AAGAQSAGTQQVAAVSSVSPATPFQSVP 187
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 126 AWPFCDPVDEATAP--NYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRADFQLIVDNCRKY 183
AWPF PVD +Y++ IK PMDL+ ++ K+D Y F AD +L+ NC KY
Sbjct: 331 AWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQGFAADVRLMFSNCYKY 390
Query: 184 NGLDNEYTDMVRRLQQIF 201
N D+E M R+LQ +F
Sbjct: 391 NPPDHEVVAMARKLQDVF 408
>sp|F1QW93|BRDT_DANRE Bromodomain testis-specific protein OS=Danio rerio GN=brdt PE=2
SV=2
Length = 918
Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 126 AWPFCDPVDEATAP--NYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRADFQLIVDNCRKY 183
AWPF PVD T +Y+E I +PMD++ +++K++A Y QF AD +L+ NC KY
Sbjct: 292 AWPFYKPVDAETLGLLDYHEIIHQPMDMSTIKKKMEAREYTDALQFAADMRLMFSNCYKY 351
Query: 184 NGLDNEYTDMVRRLQQIFRDAVSRYLDGERSSG 216
N +E M R+LQ +F S+ D +++
Sbjct: 352 NPPGHEVVSMARKLQDVFEFRFSKIPDEPKNAN 384
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 116 VMNRLKSHEDAWPFCDPVDEA--TAPNYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRADF 173
V+ L H +WPF PVD P+YY IK PMDLT + ++L+ Y + DF
Sbjct: 41 VIRALWKHHFSWPFRQPVDAVRLNLPDYYTIIKNPMDLTTIRKRLENNYYWKAMECVEDF 100
Query: 174 QLIVDNCRKYNGLDNEYTDMVRRLQQIFRDAVS 206
+ NC YN ++ M + L+++F + V+
Sbjct: 101 NTMFTNCYVYNRPGDDIVLMAQVLEKLFLEKVA 133
>sp|Q8K2F0|BRD3_MOUSE Bromodomain-containing protein 3 OS=Mus musculus GN=Brd3 PE=1 SV=2
Length = 726
Score = 71.2 bits (173), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 22/162 (13%)
Query: 116 VMNRLKSHEDAWPFCDPVD--EATAPNYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRADF 173
V+ L H+ AWPF PVD + P+Y++ IK PMD+ ++++L+ Y + + DF
Sbjct: 45 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 104
Query: 174 QLIVDNCRKYNGLDNEYTDMVRRLQQIFRDAVSRYLDGERSSGSEDEEEMAVEFQEELPP 233
+ NC YN ++ M + L++IF V+ +M E E LPP
Sbjct: 105 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVA---------------QMPQEEVELLPP 149
Query: 234 KPKGKRGRKKKIVLSPRSLTPTDEEEDKENEEKSGTPFDSIP 275
PKGK GRK + + ++ + TPF +IP
Sbjct: 150 APKGK-GRKP----AAGAQNAGSQQVAAVSSVSPATPFQNIP 186
Score = 71.2 bits (173), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 126 AWPFCDPVDEATAP--NYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRADFQLIVDNCRKY 183
AWPF PVD +Y++ IK PMDL+ ++ K+D+ Y F AD +L+ NC KY
Sbjct: 330 AWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYPDAQGFAADIRLMFSNCYKY 389
Query: 184 NGLDNEYTDMVRRLQQIF 201
N D+E M R+LQ +F
Sbjct: 390 NPPDHEVVAMARKLQDVF 407
>sp|Q9ESU6|BRD4_MOUSE Bromodomain-containing protein 4 OS=Mus musculus GN=Brd4 PE=1 SV=1
Length = 1400
Score = 71.2 bits (173), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 9/124 (7%)
Query: 112 GMHKVMNRLKSHEDAWPFCDPVD-EATAPN-YYEQIKRPMDLTRMEEKLDAGRYKTFGQF 169
G+ K M K AWPF PVD EA + Y + IK PMD++ ++ KL++ Y+ +F
Sbjct: 360 GILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYRDAQEF 419
Query: 170 RADFQLIVDNCRKYNGLDNEYTDMVRRLQQIFRDAVSRYLDGERSSGSEDEEEMAVEFQE 229
AD +L+ NC KYN D+E M R+LQ +F ++ D E EE +
Sbjct: 420 GADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD-------EPEEPVVTVSSP 472
Query: 230 ELPP 233
+PP
Sbjct: 473 AVPP 476
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Query: 109 LRIGMHKVMNRLKSHEDAWPFCDPVDEA--TAPNYYEQIKRPMDLTRMEEKLDAGRYKTF 166
L+ + V+ L H+ AWPF PVD P+YY+ IK PMD+ ++++L+ Y
Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNA 122
Query: 167 GQFRADFQLIVDNCRKYNGLDNEYTDMVRRLQQIFRDAVS 206
+ DF + NC YN ++ M L+++F ++
Sbjct: 123 QECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKIN 162
>sp|O95696|BRD1_HUMAN Bromodomain-containing protein 1 OS=Homo sapiens GN=BRD1 PE=1 SV=1
Length = 1058
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%)
Query: 109 LRIGMHKVMNRLKSHEDAWPFCDPVDEATAPNYYEQIKRPMDLTRMEEKLDAGRYKTFGQ 168
L + + V+++L+ + A F PV P+Y + IK PMD M ++L+A YK +
Sbjct: 567 LTVLLRSVLDQLQDKDPARIFAQPVSLKEVPDYLDHIKHPMDFATMRKRLEAQGYKNLHE 626
Query: 169 FRADFQLIVDNCRKYNGLDNEYTDMVRRLQ 198
F DF LI+DNC KYN D + RL+
Sbjct: 627 FEEDFDLIIDNCMKYNARDTVFYRAAVRLR 656
>sp|P55201|BRPF1_HUMAN Peregrin OS=Homo sapiens GN=BRPF1 PE=1 SV=2
Length = 1214
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 49/89 (55%)
Query: 111 IGMHKVMNRLKSHEDAWPFCDPVDEATAPNYYEQIKRPMDLTRMEEKLDAGRYKTFGQFR 170
I + K + +L+ + F +PV + P+Y + IK+PMD M++ L+A RY F F
Sbjct: 635 ILLRKTLEQLQEKDTGNIFSEPVPLSEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFE 694
Query: 171 ADFQLIVDNCRKYNGLDNEYTDMVRRLQQ 199
DF LIV NC KYN D + RL++
Sbjct: 695 EDFNLIVSNCLKYNAKDTIFYRAAVRLRE 723
>sp|Q5TJG6|BRD2_CANFA Bromodomain-containing protein 2 OS=Canis familiaris GN=BRD2 PE=3
SV=1
Length = 803
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 126 AWPFCDPVDEATAP--NYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRADFQLIVDNCRKY 183
AWPF PVD + +Y++ IK PMDL+ ++ K++ Y+ +F AD +L+ NC KY
Sbjct: 369 AWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKY 428
Query: 184 NGLDNEYTDMVRRLQQIF 201
N D++ M R+LQ +F
Sbjct: 429 NPPDHDVVAMARKLQDVF 446
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 16/133 (12%)
Query: 113 MHKV-MNRLKSHEDAWPFCDPVDEA--TAPNYYEQIKRPMDLTRMEEKLDAGRYKTFGQF 169
+HKV M L H+ AWPF PVD P+Y++ IK+PMD+ ++ +L+ Y +
Sbjct: 82 LHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASEC 141
Query: 170 RADFQLIVDNCRKYNGLDNEYTDMVRRLQQIFRDAVSRYLDGERSSGSEDEEEMAVEFQE 229
DF + NC YN ++ M + L++IF V +S ++E+E+ V
Sbjct: 142 MQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKV--------ASMPQEEQELVVTI-- 191
Query: 230 ELPPKPKGKRGRK 242
PK K+G K
Sbjct: 192 ---PKNSHKKGAK 201
>sp|Q32S26|BRD2_BOVIN Bromodomain-containing protein 2 OS=Bos taurus GN=BRD2 PE=3 SV=1
Length = 803
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 126 AWPFCDPVDEATAP--NYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRADFQLIVDNCRKY 183
AWPF PVD + +Y++ IK PMDL+ ++ K++ Y+ +F AD +L+ NC KY
Sbjct: 369 AWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKY 428
Query: 184 NGLDNEYTDMVRRLQQIF 201
N D++ M R+LQ +F
Sbjct: 429 NPPDHDVVAMARKLQDVF 446
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 16/133 (12%)
Query: 113 MHKV-MNRLKSHEDAWPFCDPVDEA--TAPNYYEQIKRPMDLTRMEEKLDAGRYKTFGQF 169
+HKV M L H+ AWPF PVD P+Y++ IK+PMD+ ++ +L+ Y +
Sbjct: 82 LHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASEC 141
Query: 170 RADFQLIVDNCRKYNGLDNEYTDMVRRLQQIFRDAVSRYLDGERSSGSEDEEEMAVEFQE 229
DF + NC YN ++ M + L++IF V +S ++E+E+ V
Sbjct: 142 MQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKV--------ASMPQEEQELVVTI-- 191
Query: 230 ELPPKPKGKRGRK 242
PK K+G K
Sbjct: 192 ---PKNSHKKGAK 201
>sp|Q6MGA9|BRD2_RAT Bromodomain-containing protein 2 OS=Rattus norvegicus GN=Brd2 PE=2
SV=1
Length = 798
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 126 AWPFCDPVDEATAP--NYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRADFQLIVDNCRKY 183
AWPF PVD + +Y++ IK PMDL+ ++ K++ Y+ +F AD +L+ NC KY
Sbjct: 368 AWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKY 427
Query: 184 NGLDNEYTDMVRRLQQIF 201
N D++ M R+LQ +F
Sbjct: 428 NPPDHDVVAMARKLQDVF 445
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 16/133 (12%)
Query: 113 MHKV-MNRLKSHEDAWPFCDPVDEA--TAPNYYEQIKRPMDLTRMEEKLDAGRYKTFGQF 169
+HKV M L H+ AWPF PVD P+Y++ IK+PMD+ ++ +L+ Y +
Sbjct: 81 LHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASEC 140
Query: 170 RADFQLIVDNCRKYNGLDNEYTDMVRRLQQIFRDAVSRYLDGERSSGSEDEEEMAVEFQE 229
DF + NC YN ++ M + L++IF V +S ++E+E+ V
Sbjct: 141 MQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKV--------ASMPQEEQELVVTI-- 190
Query: 230 ELPPKPKGKRGRK 242
PK K+G K
Sbjct: 191 ---PKNSHKKGAK 200
>sp|Q7JJ13|BRD2_MOUSE Bromodomain-containing protein 2 OS=Mus musculus GN=Brd2 PE=1 SV=1
Length = 798
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 126 AWPFCDPVDEATAP--NYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRADFQLIVDNCRKY 183
AWPF PVD + +Y++ IK PMDL+ ++ K++ Y+ +F AD +L+ NC KY
Sbjct: 368 AWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKY 427
Query: 184 NGLDNEYTDMVRRLQQIF 201
N D++ M R+LQ +F
Sbjct: 428 NPPDHDVVAMARKLQDVF 445
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 16/133 (12%)
Query: 113 MHKV-MNRLKSHEDAWPFCDPVDEA--TAPNYYEQIKRPMDLTRMEEKLDAGRYKTFGQF 169
+HKV M L H+ AWPF PVD P+Y++ IK+PMD+ ++ +L+ Y +
Sbjct: 81 LHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASEC 140
Query: 170 RADFQLIVDNCRKYNGLDNEYTDMVRRLQQIFRDAVSRYLDGERSSGSEDEEEMAVEFQE 229
DF + NC YN ++ M + L++IF V +S ++E+E+ V
Sbjct: 141 MQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKV--------ASMPQEEQELVVTI-- 190
Query: 230 ELPPKPKGKRGRK 242
PK K+G K
Sbjct: 191 ---PKNSHKKGAK 200
>sp|P25440|BRD2_HUMAN Bromodomain-containing protein 2 OS=Homo sapiens GN=BRD2 PE=1 SV=2
Length = 801
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 126 AWPFCDPVDEATAP--NYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRADFQLIVDNCRKY 183
AWPF PVD + +Y++ IK PMDL+ ++ K++ Y+ +F AD +L+ NC KY
Sbjct: 369 AWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKY 428
Query: 184 NGLDNEYTDMVRRLQQIF 201
N D++ M R+LQ +F
Sbjct: 429 NPPDHDVVAMARKLQDVF 446
Score = 64.7 bits (156), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 16/133 (12%)
Query: 113 MHKV-MNRLKSHEDAWPFCDPVDEA--TAPNYYEQIKRPMDLTRMEEKLDAGRYKTFGQF 169
+HKV M L H+ AWPF PVD P+Y++ IK+PMD+ ++ +L+ Y +
Sbjct: 82 LHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASEC 141
Query: 170 RADFQLIVDNCRKYNGLDNEYTDMVRRLQQIFRDAVSRYLDGERSSGSEDEEEMAVEFQE 229
DF + NC YN ++ M + L++IF V +S ++E+E+ V
Sbjct: 142 MQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKV--------ASMPQEEQELVVTI-- 191
Query: 230 ELPPKPKGKRGRK 242
PK K+G K
Sbjct: 192 ---PKNSHKKGAK 201
>sp|Q9FGW9|GTE10_ARATH Transcription factor GTE10 OS=Arabidopsis thaliana GN=GTE10 PE=1
SV=2
Length = 1061
Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 116 VMNRLKSHEDAWPFCDPVDEA--TAPNYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRADF 173
++NRL SH+ WPF PVD P+Y+ IK PMDL + +L G Y + F AD
Sbjct: 168 LLNRLWSHKSGWPFRTPVDPVMLNIPDYFNVIKHPMDLGTIRSRLCKGEYSSPLDFAADV 227
Query: 174 QLIVDNCRKYNGLDNEYTDMVRRLQQIF 201
+L N YN N++ M + + + F
Sbjct: 228 RLTFSNSIAYNPPGNQFHTMAQGISKYF 255
>sp|Q9ULD4|BRPF3_HUMAN Bromodomain and PHD finger-containing protein 3 OS=Homo sapiens
GN=BRPF3 PE=1 SV=2
Length = 1205
Score = 67.8 bits (164), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 22/178 (12%)
Query: 30 IERKLQKQKEEETRRHQEEEERLEEE---WRKHKAARERQRR----IENRERGSRSNSED 82
+ LQ Q+ E R E+ ++EE W+K + ER R I RE+ R +
Sbjct: 523 LHSHLQSQRNAEQREQDEKTSAVKEELKYWQKLRHDLERARLLIELIRKREKLKREQVKV 582
Query: 83 RWTTEDTSSLCSYQTSTGGYRSTEEDLRIGMHKVMNRLKSHEDAWPFCDPVDEATAPNYY 142
+ + + + + ++ L+ + A F +PV+ + P+Y
Sbjct: 583 QQAAMELELM---------------PFNVLLRTTLDLLQEKDPAHIFAEPVNLSEVPDYL 627
Query: 143 EQIKRPMDLTRMEEKLDAGRYKTFGQFRADFQLIVDNCRKYNGLDNEYTDMVRRLQQI 200
E I +PMD + M KL++ Y+T +F DF LIV NC KYN D + RL+ +
Sbjct: 628 EFISKPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRDL 685
>sp|Q91YE5|BAZ2A_MOUSE Bromodomain adjacent to zinc finger domain protein 2A OS=Mus musculus
GN=Baz2a PE=1 SV=2
Length = 1889
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 103 RSTEEDLRIGMHKVMNRLKSHEDAWPFCDPVDEATAPNYYEQIKRPMDLTRMEEKLDAGR 162
RS DL ++ ++SH+ AWPF +PV+ Y IK PMD + M E+L G
Sbjct: 1777 RSHHSDLTF-CEIILMEMESHDAAWPFLEPVNPRLVSGYRRVIKNPMDFSTMRERLLRGG 1835
Query: 163 YKTFGQFRADFQLIVDNCRKYNGLDNEYTDMVRRLQQIF 201
Y + +F AD L+ DNC+ +N D+E +++ F
Sbjct: 1836 YTSSEEFAADALLVFDNCQTFNEDDSEVGKAGHVMRRFF 1874
>sp|Q9H0E9|BRD8_HUMAN Bromodomain-containing protein 8 OS=Homo sapiens GN=BRD8 PE=1 SV=2
Length = 1235
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 44/87 (50%)
Query: 113 MHKVMNRLKSHEDAWPFCDPVDEATAPNYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRAD 172
+ V + SH + PF PV E AP Y + +KRPMDLT ++ L GR +T QF D
Sbjct: 1112 LLPVWKMIASHRFSSPFLKPVSERQAPGYKDVVKRPMDLTSLKRNLSKGRIRTMAQFLRD 1171
Query: 173 FQLIVDNCRKYNGLDNEYTDMVRRLQQ 199
L+ N YN D+ M ++Q
Sbjct: 1172 LMLMFQNAVMYNDSDHHVYHMAVEMRQ 1198
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 48/88 (54%)
Query: 122 SHEDAWPFCDPVDEATAPNYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRADFQLIVDNCR 181
+H A F PV + AP Y+ ++RPMDL+ +++ ++ G ++ +F+ D L+ N
Sbjct: 725 NHRYANVFLQPVTDDIAPGYHSIVQRPMDLSTIKKNIENGLIRSTAEFQRDIMLMFQNAV 784
Query: 182 KYNGLDNEYTDMVRRLQQIFRDAVSRYL 209
YN D++ M +Q+ + + ++L
Sbjct: 785 MYNSSDHDVYHMAVEMQRDVLEQIQQFL 812
>sp|Q9HGP4|YK82_SCHPO Bromodomain-containing protein C631.02 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC631.02 PE=1 SV=3
Length = 727
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 59/123 (47%), Gaps = 15/123 (12%)
Query: 95 YQTSTGGYRSTEEDLRIGMHK----------VMNRL--KSHED-AWPFCDPVDEATA--P 139
Y S+ G R T DL+ K V+ L K HE A+PF PV+ P
Sbjct: 369 YSNSSSGIRETMYDLKPHRRKDAAEMKFCQSVLKELLKKQHEAYAYPFYKPVNPTACGCP 428
Query: 140 NYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRADFQLIVDNCRKYNGLDNEYTDMVRRLQQ 199
+Y++ IK PMDL M+ KL+ Y + F AD L+ NC K+N M ++L+
Sbjct: 429 DYFKVIKHPMDLGTMQNKLNHNEYASMKAFEADMVLMFKNCYKFNSAGTPVHLMGKKLES 488
Query: 200 IFR 202
IF+
Sbjct: 489 IFQ 491
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 113 MHKVMNRLKSHEDAWPFCDPVDEA--TAPNYYEQIKRPMDLTRMEEKLDAGRYKTFGQFR 170
+H ++ +L+ D+ PF PVD P+Y IK P+DL M++K +G Y + F
Sbjct: 238 IHAMLRQLRRGRDSIPFRAPVDPVKQNIPDYPTIIKNPIDLGTMQKKFSSGVYSSAQHFI 297
Query: 171 ADFQLIVDNCRKYNGLDNEYTDMVRRLQQIF 201
D L+ NC YNG ++ M + LQ F
Sbjct: 298 DDMNLMFSNCFLYNGTESPVGVMGKNLQATF 328
>sp|Q9UIF9|BAZ2A_HUMAN Bromodomain adjacent to zinc finger domain protein 2A OS=Homo sapiens
GN=BAZ2A PE=1 SV=4
Length = 1905
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%)
Query: 116 VMNRLKSHEDAWPFCDPVDEATAPNYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRADFQL 175
++ ++SH+ AWPF +PV+ Y IK PMD + M E+L G Y + +F AD L
Sbjct: 1805 ILMEMESHDAAWPFLEPVNPRLVSGYRRIIKNPMDFSTMRERLLRGGYTSSEEFAADALL 1864
Query: 176 IVDNCRKYNGLDNEYTDMVRRLQQIF 201
+ DNC+ +N D+E +++ F
Sbjct: 1865 VFDNCQTFNEDDSEVGKAGHIMRRFF 1890
>sp|Q9Y7N0|BDF1_SCHPO SWR1 complex bromodomain subunit bdf1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=bdf1 PE=1 SV=1
Length = 578
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 126 AWPFCDPVDEATA--PNYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRADFQLIVDNCRKY 183
A+PF PVD P+Y++ IK PMDL+ ++ KL+ Y T +F +D L+ +NC Y
Sbjct: 276 AFPFYQPVDPVACDCPDYFDVIKEPMDLSTIQSKLNKNEYSTLEEFESDILLMFNNCFTY 335
Query: 184 NGLDNEYTDMVRRLQQIFRD 203
N M R+L+ +F++
Sbjct: 336 NPPGTPVHVMGRQLENVFKE 355
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Query: 116 VMNRLKSHEDAWPFCDPVDEA--TAPNYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRADF 173
++ +LK +++ PF PVD P+Y +K PMDL +E+KL + Y +F D
Sbjct: 96 IVRQLKRTKNSAPFKVPVDPIKQNIPDYPTIVKNPMDLGTIEKKLTSYEYSVPQEFIDDM 155
Query: 174 QLIVDNCRKYNGLDNEYTDMVRRLQQIFRDAVSRYLDGERSSGS 217
L+ NC YNG ++ M + LQ++F + + D E+ + +
Sbjct: 156 NLMFSNCFLYNGTESPVGSMGKALQEVFERQLKQLPDAEQPAAA 199
>sp|P13709|FSH_DROME Homeotic protein female sterile OS=Drosophila melanogaster
GN=fs(1)h PE=1 SV=2
Length = 2038
Score = 65.9 bits (159), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 126 AWPFCDPVDEATAP--NYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRADFQLIVDNCRKY 183
AWPF PVD +Y++ IK+PMDL ++ K+D YK+ +F AD +LI NC KY
Sbjct: 500 AWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNREYKSAPEFAADVRLIFTNCYKY 559
Query: 184 NGLDNEYTDMVRRLQQIF 201
N D++ M R+LQ +F
Sbjct: 560 NPPDHDVVAMGRKLQDVF 577
Score = 53.9 bits (128), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 20/131 (15%)
Query: 116 VMNRLKSHEDAWPFCDPVD--EATAPNYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRADF 173
VM + H +WPF PVD + P+Y++ IK+PMD+ ++++L+ Y + + DF
Sbjct: 46 VMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQDF 105
Query: 174 QLIVDNCRKYNGLDNEYTDMVRRLQQIFRDAVSRYLDGERSSGSEDEEEMAVEFQEELPP 233
+ +NC YN + M + L+++F + E M +EEL
Sbjct: 106 NTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKI---------------ESMP---KEELEL 147
Query: 234 KPKGKRGRKKK 244
+P +G KKK
Sbjct: 148 EPVTAKGGKKK 158
>sp|F7DRV9|BRDT_XENTR Bromodomain testis-specific protein OS=Xenopus tropicalis GN=brdt
PE=3 SV=1
Length = 933
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%)
Query: 121 KSHEDAWPFCDPVDEATAPNYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRADFQLIVDNC 180
K E AWPF V + + + IK PMDL + +K++ G YK F +D +L+ N
Sbjct: 298 KHAEYAWPFYKTVIPTSLLDCSDAIKHPMDLATIRDKMENGLYKDTQDFASDVRLMFMNS 357
Query: 181 RKYNGLDNEYTDMVRRLQQIFRDAVSRYLDGERSSGSEDE 220
KYN DNE +M R++Q +F ++ D ++ S E
Sbjct: 358 YKYNPPDNEVVNMARKMQDVFEGMFAKIPDDPLATQSMVE 397
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 20/135 (14%)
Query: 116 VMNRLKSHEDAWPFCDPVDEA--TAPNYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRADF 173
V+ L H +WPF PVD A P+YY+ IK PMDL+ + ++L+ Y DF
Sbjct: 40 VLKALWRHHFSWPFQQPVDAAKLNLPDYYQIIKNPMDLSTIRKRLEYNYYSKALDCIQDF 99
Query: 174 QLIVDNCRKYNGLDNEYTDMVRRLQQIFRDAVSRYLDGERSSGSEDEEEMAVEFQEELPP 233
+ NC YN ++ M + L+++F + ++ +E E++V
Sbjct: 100 NTMFTNCYIYNKPGDDIVVMSQELEKVFMEKIAEM--------PHEEIELSVV------- 144
Query: 234 KPKGKRGRKKKIVLS 248
G RG K +I +S
Sbjct: 145 ---GNRGVKSRIKIS 156
>sp|Q80UV9|TAF1_MOUSE Transcription initiation factor TFIID subunit 1 OS=Mus musculus
GN=Taf1 PE=2 SV=2
Length = 1891
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%)
Query: 116 VMNRLKSHEDAWPFCDPVDEATAPNYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRADFQL 175
V ++ + D+WPF PV++ P+YY+ I PMDL + + + +Y++ F D L
Sbjct: 1536 VTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVSPMDLETIRKNISKHKYQSRESFLDDVNL 1595
Query: 176 IVDNCRKYNGLDNEYTDMVRRLQQIFRDAVSRY 208
I+ N KYNG +++YT + + + ++ Y
Sbjct: 1596 ILANSVKYNGPESQYTKTAQEIVNVCHQTLTEY 1628
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%)
Query: 113 MHKVMNRLKSHEDAWPFCDPVDEATAPNYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRAD 172
+ ++N ++ + +PF PV+ +YY+ I RPMDL + E + Y + +FR
Sbjct: 1410 LESIINDMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREH 1469
Query: 173 FQLIVDNCRKYNGLDNEYTDMVRRL 197
+LIV N YNG + T + + +
Sbjct: 1470 LELIVKNSATYNGPKHSLTQISQSM 1494
>sp|Q8IZX4|TAF1L_HUMAN Transcription initiation factor TFIID subunit 1-like OS=Homo sapiens
GN=TAF1L PE=1 SV=1
Length = 1826
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%)
Query: 116 VMNRLKSHEDAWPFCDPVDEATAPNYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRADFQL 175
V ++ + D+WPF PV++ P+YY+ I P+DL + + + +Y++ F D L
Sbjct: 1534 VTQKMMAVPDSWPFHHPVNKKFVPDYYKMIVNPVDLETIRKNISKHKYQSRESFLDDVNL 1593
Query: 176 IVDNCRKYNGLDNEYTDMVRRLQQIFRDAVSRY 208
I+ N KYNG +++YT + + I ++ Y
Sbjct: 1594 ILANSVKYNGPESQYTKTAQEIVNICYQTITEY 1626
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%)
Query: 113 MHKVMNRLKSHEDAWPFCDPVDEATAPNYYEQIKRPMDLTRMEEKLDAGRYKTFGQFRAD 172
+ ++N ++ + PF PV+ +YY+ I RPMDL + E + Y + +FR
Sbjct: 1408 LESIINDMRDLPNTHPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKCLYPSREEFREH 1467
Query: 173 FQLIVDNCRKYNGLDNEYTDMVRRL 197
+LIV N YNG + T + + +
Sbjct: 1468 LELIVKNSATYNGPKHSLTQISQSM 1492
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.129 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 112,187,544
Number of Sequences: 539616
Number of extensions: 5131693
Number of successful extensions: 60869
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 890
Number of HSP's that attempted gapping in prelim test: 40872
Number of HSP's gapped (non-prelim): 12566
length of query: 277
length of database: 191,569,459
effective HSP length: 116
effective length of query: 161
effective length of database: 128,974,003
effective search space: 20764814483
effective search space used: 20764814483
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 60 (27.7 bits)