BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16437
(501 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|332376182|gb|AEE63231.1| unknown [Dendroctonus ponderosae]
Length = 429
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 180/274 (65%), Positives = 225/274 (82%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL +RILDLTRI+AGP+CTM+L DLGAEV+K+E+P GDE R WGPPF+ +T+ S YF
Sbjct: 34 PLHGIRILDLTRIVAGPYCTMILGDLGAEVLKIEKPGRGDEARIWGPPFVGDTKESCYFI 93
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
NRNKKSVCV+ ++ EG+ I+ +LAK D+LVEN+VPGKLD L LGY+H EI LIY
Sbjct: 94 TFNRNKKSVCVNIQSEEGRNILYELAKVSDILVENYVPGKLDSLQLGYEHFYEIAPHLIY 153
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TGFGSKGPY RPGYD+IAASIGGLLHITG +G PCK G+A IDL+TGLYAHGA++
Sbjct: 154 CSITGFGSKGPYSKRPGYDVIAASIGGLLHITGPENGEPCKTGVALIDLSTGLYAHGAIL 213
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
AALL + KTGKGQKIDC+LLST++S LIN+G+NYLNAG E RWGT+H ++VP+Q F T
Sbjct: 214 AALLKRAKTGKGQKIDCDLLSTELSTLINIGSNYLNAGKEATRWGTAHESIVPYQAFPTQ 273
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+GY TIGTGSDKQ+ + C+++N + LA DP++LT
Sbjct: 274 DGYYTIGTGSDKQFVEFCRLINHKELADDPKFLT 307
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 86/139 (61%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+++N + LA DP++LT +RV+NR L + I KT EW +F SFP VN
Sbjct: 290 FCRLINHKELADDPKFLTNEVRVKNRLELIEIIGRALSAKTNSEWADVFASSSFPNGPVN 349
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ F D H++ + +VK ++H G+I++VGPAV YS E+RTPPP LG+HT+ VL
Sbjct: 350 DLRATFNDPHVKSVDIVKTLNHSTAGEIRVVGPAVTYSEGGNEIRTPPPVLGQHTEEVLS 409
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L YD I +L+E KI+
Sbjct: 410 GVLGYDTKKIRELREMKII 428
>gi|91082479|ref|XP_972168.1| PREDICTED: similar to formyl-coenzyme A transferase [Tribolium
castaneum]
Length = 457
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 176/288 (61%), Positives = 224/288 (77%), Gaps = 2/288 (0%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTY 273
+ PL VR+LDLTRI+AGP+CTM+LADLGAEV+K+E+P GDE RKWGPPF+NNT + Y
Sbjct: 62 NFPLEGVRVLDLTRIVAGPYCTMILADLGAEVLKIERPGGGDEARKWGPPFINNTAETAY 121
Query: 274 FTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQL 333
F C+NRNKKSVCVD K +G+ I+ LA++ DVLVEN+VPGKLD + LGY+HL + L
Sbjct: 122 FVCLNRNKKSVCVDLK--KGRDILYKLAEKSDVLVENYVPGKLDEMQLGYEHLKAVAPHL 179
Query: 334 IYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGA 393
IYCS+TGFG GPY+ +PGYD+IAAS+GG LHITG G PCK G+A DL+TGLYAHGA
Sbjct: 180 IYCSITGFGPDGPYRTKPGYDVIAASMGGFLHITGPQGGEPCKAGVAMTDLSTGLYAHGA 239
Query: 394 VMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFK 453
+MAAL + +TGKGQKIDCNLLSTQV+ LIN+G+NYLN G E RWGT+H ++VP++ F
Sbjct: 240 IMAALFQRTRTGKGQKIDCNLLSTQVASLINIGSNYLNTGKEASRWGTAHESIVPYEAFP 299
Query: 454 TSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
T +GY TIGTGSD Q+QD+C+ + LA + ++ T L + + LI
Sbjct: 300 TKDGYYTIGTGSDLQFQDLCRKLKRPDLAENDKFKTNQLRVKHRTELI 347
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 83/139 (59%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + LA + ++ T LRV++R L + + KT +EW IF G SFP VN
Sbjct: 318 LCRKLKRPDLAENDKFKTNQLRVKHRTELIGLLRSIMATKTKKEWSEIFAGGSFPSGPVN 377
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
S+ + F D HI++I LV+ + H G+IK+VGP V YS VR+PPP LG+HT VL+
Sbjct: 378 SLKETFDDPHIKEIGLVQNLEHPVAGNIKVVGPPVKYSDGGNSVRSPPPTLGQHTQEVLE 437
Query: 121 DLLNYDETTIAKLKEKKIL 139
+LNY I LK++ ++
Sbjct: 438 TILNYSTEQINDLKKQSVI 456
>gi|312371260|gb|EFR19493.1| hypothetical protein AND_22328 [Anopheles darlingi]
Length = 528
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 175/273 (64%), Positives = 221/273 (80%), Gaps = 2/273 (0%)
Query: 215 LPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYF 274
PL +++LDLTRI+AGP+CTM+L DLGAEV K+E+P GDE RKWGPPFL N+ S YF
Sbjct: 40 FPLEGIKVLDLTRIVAGPYCTMVLGDLGAEVYKIERPFVGDESRKWGPPFLRNSSDSVYF 99
Query: 275 TCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLI 334
NRNKKSVCV+ KT G+++I +LA++CDVLVEN+VPGKLD L LGY+ L I LI
Sbjct: 100 MAANRNKKSVCVNLKT--GREVIYELARKCDVLVENYVPGKLDELGLGYETLRTIAPSLI 157
Query: 335 YCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAV 394
YCS+TGFGS GPY+ +PGYD+IA+SIGGLLHITG DGPP KVGIA D+ATGLYAHGA+
Sbjct: 158 YCSITGFGSVGPYRSKPGYDVIASSIGGLLHITGSEDGPPAKVGIAITDIATGLYAHGAI 217
Query: 395 MAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKT 454
+AALL +Y+TG+GQKID NLLSTQV+ LINV +NYLNA E KRWGT+H ++VP++ F+T
Sbjct: 218 LAALLQRYRTGRGQKIDVNLLSTQVACLINVASNYLNANKEAKRWGTAHESIVPYEAFQT 277
Query: 455 SNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
GY+TIG GSD Q+ D+C+++ ++ LA D R+
Sbjct: 278 RTGYITIGCGSDAQFVDLCRLLGVEELAQDVRF 310
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 74/116 (63%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+++ ++ LA D R+ RVE+R L + + K++ EW+ +F+ SFP +N
Sbjct: 295 LCRLLGVEELAQDVRFANNRARVEHRRELVELLATILKGKSSAEWMELFETASFPVGPIN 354
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTD 116
++ +VF D H++ I LV+ ++H G++K+VGP VAYS + E+ + PP LGEHTD
Sbjct: 355 NMKEVFDDRHVKAIGLVQTVAHPTAGEVKLVGPPVAYSEARNEIISVPPLLGEHTD 410
>gi|270007145|gb|EFA03593.1| hypothetical protein TcasGA2_TC013676 [Tribolium castaneum]
Length = 508
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 176/288 (61%), Positives = 224/288 (77%), Gaps = 2/288 (0%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTY 273
+ PL VR+LDLTRI+AGP+CTM+LADLGAEV+K+E+P GDE RKWGPPF+NNT + Y
Sbjct: 62 NFPLEGVRVLDLTRIVAGPYCTMILADLGAEVLKIERPGGGDEARKWGPPFINNTAETAY 121
Query: 274 FTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQL 333
F C+NRNKKSVCVD K +G+ I+ LA++ DVLVEN+VPGKLD + LGY+HL + L
Sbjct: 122 FVCLNRNKKSVCVDLK--KGRDILYKLAEKSDVLVENYVPGKLDEMQLGYEHLKAVAPHL 179
Query: 334 IYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGA 393
IYCS+TGFG GPY+ +PGYD+IAAS+GG LHITG G PCK G+A DL+TGLYAHGA
Sbjct: 180 IYCSITGFGPDGPYRTKPGYDVIAASMGGFLHITGPQGGEPCKAGVAMTDLSTGLYAHGA 239
Query: 394 VMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFK 453
+MAAL + +TGKGQKIDCNLLSTQV+ LIN+G+NYLN G E RWGT+H ++VP++ F
Sbjct: 240 IMAALFQRTRTGKGQKIDCNLLSTQVASLINIGSNYLNTGKEASRWGTAHESIVPYEAFP 299
Query: 454 TSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
T +GY TIGTGSD Q+QD+C+ + LA + ++ T L + + LI
Sbjct: 300 TKDGYYTIGTGSDLQFQDLCRKLKRPDLAENDKFKTNQLRVKHRTELI 347
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 58/98 (59%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + LA + ++ T LRV++R L + + KT +EW IF G SFP VN
Sbjct: 318 LCRKLKRPDLAENDKFKTNQLRVKHRTELIGLLRSIMATKTKKEWSEIFAGGSFPSGPVN 377
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYS 98
S+ + F D HI++I LV+ + H G+IK+VGP V YS
Sbjct: 378 SLKETFDDPHIKEIGLVQNLEHPVAGNIKVVGPPVKYS 415
>gi|157140524|ref|XP_001647648.1| alpha methylacyl-coa racemase [Aedes aegypti]
gi|108866835|gb|EAT32316.1| AAEL015557-PA [Aedes aegypti]
Length = 432
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/290 (61%), Positives = 231/290 (79%), Gaps = 3/290 (1%)
Query: 201 FYSLDLALSSENPS-LPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRK 259
F+ + SS +PS PL ++ILDLTRI+AGP+CTM+L+DLGAEV KVE+P GDE RK
Sbjct: 23 FHLTKVLPSSVDPSKYPLDGIKILDLTRIVAGPYCTMVLSDLGAEVYKVERPFHGDESRK 82
Query: 260 WGPPFLNNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRL 319
WGPPFL ++E S YF NRNKKSVCVD K +G+ +I D+A++CDVLVEN++PGKLD
Sbjct: 83 WGPPFLRDSEDSVYFMASNRNKKSVCVDLK--KGKDVIYDMARKCDVLVENYIPGKLDEF 140
Query: 320 NLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGI 379
LGY+ L +I LIYCS+TG+GS GPY+++PGYD+IAAS+GGLLHITG DGPP KVG+
Sbjct: 141 GLGYEDLKQIAPSLIYCSITGYGSVGPYRNKPGYDVIAASMGGLLHITGSEDGPPSKVGV 200
Query: 380 ASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRW 439
A D+ATGLYAHGA++AALL + +T GQKID NLLSTQV+ LINV +NYLNAG E KRW
Sbjct: 201 AITDIATGLYAHGAILAALLQRTRTNCGQKIDVNLLSTQVACLINVASNYLNAGKEAKRW 260
Query: 440 GTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
GT+HA++VP++ F TSNGY+TIG GS+ Q++ +C + +Q +A D R++T
Sbjct: 261 GTAHASIVPYEAFPTSNGYITIGCGSNVQFEALCNYLQIQEVAKDARFVT 310
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 87/139 (62%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + +Q +A D R++T RV++R+ L + ++++ EW+ IF FP +N
Sbjct: 293 LCNYLQIQEVAKDARFVTNQTRVKHRKELIAILAPIIQQRSSAEWMEIFADAPFPVGPIN 352
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
S+++VF D HI+ I LVK + H G++K+VGP V YS RT PP LGEHTD VL+
Sbjct: 353 SMAEVFRDPHIEAIGLVKSLDHPTSGEVKVVGPPVIYSEANNCARTAPPLLGEHTDRVLR 412
Query: 121 DLLNYDETTIAKLKEKKIL 139
+LL+Y + I KL++K I+
Sbjct: 413 ELLDYPDDKIDKLRQKGII 431
>gi|170039875|ref|XP_001847745.1| formyl-coenzyme A transferase [Culex quinquefasciatus]
gi|167863466|gb|EDS26849.1| formyl-coenzyme A transferase [Culex quinquefasciatus]
Length = 432
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 171/276 (61%), Positives = 225/276 (81%), Gaps = 2/276 (0%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTY 273
+ PL V++LDLTRI+AGP+CTM+LADLGAEV K+E+P GDE RKWGPPFL +++ S Y
Sbjct: 37 NFPLEGVKVLDLTRIVAGPYCTMVLADLGAEVYKIERPFHGDESRKWGPPFLKDSKDSVY 96
Query: 274 FTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQL 333
F NRNKKSVCVD K +G+++I DLA++CDVLVEN++PGKLD++ LGY++L++I L
Sbjct: 97 FMASNRNKKSVCVDLK--KGREVIYDLARKCDVLVENYIPGKLDQMGLGYENLAQIAPSL 154
Query: 334 IYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGA 393
IYCS+TG+G GPYK +PGYD+IAASIGGLLHITG DGPP KVG+A D+ATGLYAHGA
Sbjct: 155 IYCSITGYGPVGPYKSKPGYDVIAASIGGLLHITGSEDGPPAKVGVAITDIATGLYAHGA 214
Query: 394 VMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFK 453
++AALL +++T +GQKID NLLSTQV+ LINV +NYLNA E KRWGT+H ++VP++ F
Sbjct: 215 ILAALLQRHRTNRGQKIDVNLLSTQVACLINVASNYLNANKEAKRWGTAHESIVPYEAFP 274
Query: 454 TSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
TSNG++TIG GS+ Q++ +C + + +A D R+ T
Sbjct: 275 TSNGHITIGCGSNAQFEALCTYLEIPEVASDERFRT 310
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 82/139 (58%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + + +A D R+ T RV +R+ L + +K++ EW+ IF FP +N
Sbjct: 293 LCTYLEIPEVASDERFRTNQTRVTHRQELIAILAPIIAQKSSPEWMTIFADAPFPVGPIN 352
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
S+++VF D HI+ I+LVK + H G++K+VGP V YS +T PP LG+HT+ VL+
Sbjct: 353 SMAEVFQDPHIRAIELVKSLDHPTAGEVKVVGPPVVYSEAANRAQTAPPLLGQHTEQVLR 412
Query: 121 DLLNYDETTIAKLKEKKIL 139
DLL Y + I L++ + +
Sbjct: 413 DLLQYSDDKIVGLRKTEAI 431
>gi|194744171|ref|XP_001954568.1| GF18334 [Drosophila ananassae]
gi|190627605|gb|EDV43129.1| GF18334 [Drosophila ananassae]
Length = 450
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 175/281 (62%), Positives = 227/281 (80%), Gaps = 2/281 (0%)
Query: 209 SSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNT 268
+S N S PL VRILDLTRIIAGP+CTM+LADLGAEVIKVE+P GDE RKWGPPFL N+
Sbjct: 50 ASVNDSHPLQGVRILDLTRIIAGPYCTMVLADLGAEVIKVERPNFGDESRKWGPPFLENS 109
Query: 269 ELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSE 328
S YF NRNK+SVC+D K G +++ LA+ DVLVEN+VPG L+R +GY+ L +
Sbjct: 110 TDSAYFLAPNRNKRSVCIDIK--RGTKLLHKLAEISDVLVENYVPGTLERYGMGYEQLKK 167
Query: 329 INSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGL 388
+N +LIYCS+TG+GS GPY RPGYD+IA+S+GGLLHITG DGPP KVG+A D+ATGL
Sbjct: 168 VNPKLIYCSLTGYGSVGPYAKRPGYDVIASSVGGLLHITGERDGPPSKVGVAVTDVATGL 227
Query: 389 YAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVP 448
YAHGA++AAL +++T +GQKID NLLST SMLINV ANYLNAG+E +RWGT+H+++VP
Sbjct: 228 YAHGAILAALYQRHRTQRGQKIDVNLLSTCCSMLINVAANYLNAGVEAERWGTAHSSIVP 287
Query: 449 HQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
++ FKT +GY+T+GTGSD Q+Q++C+ +N++ L+ D ++ T
Sbjct: 288 YESFKTQDGYLTLGTGSDAQFQELCRRLNVESLSQDAKFKT 328
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 91/139 (65%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ +N++ L+ D ++ T RV++RE L + +E + T+ W+ F+G SFP VN
Sbjct: 311 LCRRLNVESLSQDAKFKTNKDRVKHREELVQLLERILAKDTSRNWMQCFEGASFPVGPVN 370
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I +VF DEHIQ I LVK + H K G +K+VGP V YS + + RT PP LGEHTD VL
Sbjct: 371 NIREVFEDEHIQAIGLVKTLPHPKAGSVKLVGPPVVYSDARNDARTAPPMLGEHTDEVLG 430
Query: 121 DLLNYDETTIAKLKEKKIL 139
+LL Y + +A+L+E+ ++
Sbjct: 431 ELLGYKQDELAELREQGVI 449
>gi|383858708|ref|XP_003704841.1| PREDICTED: caiB/baiF CoA-transferase family protein C7orf10 homolog
[Megachile rotundata]
Length = 429
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 173/282 (61%), Positives = 225/282 (79%), Gaps = 2/282 (0%)
Query: 206 LALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL 265
L S+E+ PLS+VR+LDLTRIIAGP+CTM+L DLGAE++KVE+P +GDE RKWGPPF+
Sbjct: 26 LCTSTEDYKSPLSDVRVLDLTRIIAGPYCTMILGDLGAEILKVEKPGSGDEARKWGPPFI 85
Query: 266 NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKH 325
+T+ S YF VNRNKKS+C+D K EG+ II +LAK+CDVLVEN++PGKL ++ LGY+
Sbjct: 86 KDTQESVYFLSVNRNKKSICIDLK--EGKDIIFELAKKCDVLVENYIPGKLKQMGLGYED 143
Query: 326 LSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLA 385
+S+I +IYCS+TG+G +GPY +RPGYD+IAAS+GGLLHITG DGPPCKVG+A D+A
Sbjct: 144 ISKIAPHIIYCSLTGYGYEGPYANRPGYDVIAASVGGLLHITGEKDGPPCKVGVAVTDIA 203
Query: 386 TGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHAN 445
TGLYAHGA++AAL + T KGQ I CNLL+TQV+ LIN+G+NYLNAG E RWG+ H +
Sbjct: 204 TGLYAHGAILAALYQRKNTNKGQWIQCNLLATQVAGLINIGSNYLNAGKEAVRWGSEHES 263
Query: 446 VVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
+VP++ F T +GY+T+GTGSD Q+ D+ K M L L +Y
Sbjct: 264 IVPYEAFPTKDGYMTVGTGSDIQFIDLAKRMQLTELLNSDKY 305
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 83/139 (59%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+ K M L L +Y RVENR L + K K+ +EW L+F+G SFPY +N
Sbjct: 290 LAKRMQLTELLNSDKYKNNKARVENRNELLPLLRKKFKTKSNKEWALVFEGASFPYGPIN 349
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I QVF D I+ +K+V+++ H +K+VGPAV YS + R PP LG+HTD +LK
Sbjct: 350 TIGQVFEDPQIKHMKMVQDLEHSTGNRVKVVGPAVTYSYATNKARFAPPMLGQHTDDILK 409
Query: 121 DLLNYDETTIAKLKEKKIL 139
++LNY + I LK+ KI+
Sbjct: 410 NILNYTDDEIKVLKKNKIV 428
>gi|195112827|ref|XP_002000973.1| GI10535 [Drosophila mojavensis]
gi|193917567|gb|EDW16434.1| GI10535 [Drosophila mojavensis]
Length = 443
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 170/274 (62%), Positives = 222/274 (81%), Gaps = 2/274 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL VRILDLTRIIAGP+CTM+LADLGAEVIKVE+P GDE RKWGPPFL + + YF
Sbjct: 50 PLRGVRILDLTRIIAGPYCTMVLADLGAEVIKVERPHFGDEARKWGPPFLEKSGDAAYFL 109
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
NRNK+SVC+D K G+ +++ L +CDVLVEN+VPG L+R LGY+ L + N +LIY
Sbjct: 110 APNRNKQSVCIDMK--RGRDLMQQLVSKCDVLVENYVPGTLERYGLGYEQLRQANPRLIY 167
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
C+++G+GS GPY RPGYD+IA+S+GGLLHITG PDGPP KVG+A D+ATGLYAHGA++
Sbjct: 168 CTISGYGSVGPYAKRPGYDVIASSMGGLLHITGQPDGPPSKVGVAVTDVATGLYAHGAIL 227
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
AALL + +T +GQKID +LLST S+LINV +NYLNAGIE KRWGT+H+++VP+Q FKT+
Sbjct: 228 AALLQRERTQRGQKIDVDLLSTCCSLLINVASNYLNAGIEAKRWGTAHSSIVPYQSFKTA 287
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+GY+T+G GSD Q+ ++C +N++ +ALD ++ T
Sbjct: 288 DGYLTLGAGSDAQFVELCSRLNIEPIALDVKFKT 321
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 87/139 (62%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C +N++ +ALD ++ T RV+NRE L + +++ W+ +F+G SF VN
Sbjct: 304 LCSRLNIEPIALDVKFKTNKDRVKNREELVNLLAKILASDSSKNWMRVFEGASFVVGPVN 363
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI +VF DEHIQ I LVK + H + G +K+VGP V YS + + RT PP LGEHTD VL
Sbjct: 364 SIREVFEDEHIQAIGLVKTLPHPRDGSVKVVGPPVVYSEARNDARTAPPMLGEHTDKVLA 423
Query: 121 DLLNYDETTIAKLKEKKIL 139
+LL Y IA+L+ + I+
Sbjct: 424 NLLGYGAEEIAELRSQGII 442
>gi|195449726|ref|XP_002072197.1| GK22719 [Drosophila willistoni]
gi|194168282|gb|EDW83183.1| GK22719 [Drosophila willistoni]
Length = 433
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 169/274 (61%), Positives = 219/274 (79%), Gaps = 2/274 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL +RILDLTRIIAGPFCTM+LADLGAEVIKVE+P GDE RKWGPPFL ++ STY+
Sbjct: 40 PLKGIRILDLTRIIAGPFCTMVLADLGAEVIKVERPHFGDESRKWGPPFLEQSKDSTYYL 99
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
NRNK+SVC+D K G ++ DLA+ DV VEN+VPG LDR LGY L EIN +L+Y
Sbjct: 100 ASNRNKQSVCIDLK--RGTDMLHDLARISDVFVENYVPGTLDRYGLGYDQLKEINPKLVY 157
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
C+++G+GS GPY RPGYD+IA+S+GGLLHITG PDGPP KVG+A D+ATGLYAHGA++
Sbjct: 158 CTLSGYGSTGPYAKRPGYDVIASSMGGLLHITGQPDGPPSKVGVAVTDIATGLYAHGAIL 217
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
AAL + ++ +GQKID +LLST S+LINVG+NYLNAG E KRWGT H+++VP+Q FKT
Sbjct: 218 AALYQRERSQRGQKIDVDLLSTCCSLLINVGSNYLNAGTEAKRWGTQHSSIVPYQSFKTR 277
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+GY+T+G GSD Q+ ++C+ + ++ ++ DP++ T
Sbjct: 278 DGYLTLGAGSDAQFVELCRRLGIEQVSSDPKFQT 311
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 88/139 (63%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + ++ ++ DP++ T RV NR+ L K +E T++ W+ F+G SFP VN
Sbjct: 294 LCRRLGIEQVSSDPKFQTNRDRVTNRKELVKLLEDILSGDTSKNWMKQFEGASFPVGPVN 353
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I +VF DEHIQ I LVK + H+K G +K+VGP V YS + + RT PP LGEHTD VL
Sbjct: 354 NIREVFEDEHIQAINLVKTLRHDKDGAVKVVGPPVVYSEARNDARTAPPTLGEHTDKVLS 413
Query: 121 DLLNYDETTIAKLKEKKIL 139
LL YD I L+++ I+
Sbjct: 414 QLLGYDPQKIQHLRDQGII 432
>gi|380028003|ref|XP_003697701.1| PREDICTED: caiB/baiF CoA-transferase family protein C7orf10-like
[Apis florea]
Length = 427
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 172/272 (63%), Positives = 219/272 (80%), Gaps = 2/272 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PLS +R+LDLTRIIAGP+CTM+L DLGAE++K+E+P +GDE RKWGPPFL TE +TYF
Sbjct: 34 PLSGIRVLDLTRIIAGPYCTMILGDLGAEILKIEKPDSGDEARKWGPPFLQGTEEATYFL 93
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNKKS+C+D K +G+ II +LAK+ DVLVEN+VPGKL ++ LGY+ +S+I LIY
Sbjct: 94 SVNRNKKSICIDLK--KGKDIIYELAKKSDVLVENYVPGKLKKMGLGYEDISKIAPHLIY 151
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+G KGPY +RPGYD+IAASIGGLLHITG +GPPCKVGIA DLATGLYAHGA++
Sbjct: 152 CSLTGYGYKGPYANRPGYDVIAASIGGLLHITGSKNGPPCKVGIAVTDLATGLYAHGAIL 211
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
AAL + T KGQ I CNLL+TQV+ LIN+G+NYLNA E RWG+ H ++VP++ F T
Sbjct: 212 AALYQRMTTKKGQWIQCNLLATQVASLINIGSNYLNANKEAVRWGSEHESIVPYEAFHTK 271
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
+GY+T+GTGSD Q+ D+ K M+L L+ +Y
Sbjct: 272 DGYMTVGTGSDAQFLDLLKRMHLTELSKIDKY 303
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 87/139 (62%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+ K M+L L+ +Y RVENR+ L + + KT +EW ++F+G SFPY +N
Sbjct: 288 LLKRMHLTELSKIDKYKNNKTRVENRDELLSILRKRFETKTNKEWTIVFEGASFPYGPIN 347
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I QVF D HI +K+V+E+ H IK+VGPAV YS + +VR PP +G+HT +LK
Sbjct: 348 TIKQVFEDPHINYMKIVQEMEHSTGKRIKVVGPAVTYSYSTNKVRFAPPVMGQHTTEILK 407
Query: 121 DLLNYDETTIAKLKEKKIL 139
++LNY + I LK+ KI+
Sbjct: 408 NILNYTDDKIEALKKVKIV 426
>gi|350409714|ref|XP_003488823.1| PREDICTED: caiB/baiF CoA-transferase family protein C7orf10-like
[Bombus impatiens]
Length = 429
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 171/272 (62%), Positives = 218/272 (80%), Gaps = 2/272 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PLS +R+LDLTRIIAGP+CTM+L DLGAE++K+E+P +GDE RKWGPPF+ TE +TYF
Sbjct: 36 PLSGIRVLDLTRIIAGPYCTMILGDLGAEILKIEKPGSGDEARKWGPPFIEGTEEATYFL 95
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNKKS+C+D K EG+ +I +LAK+ DVLVEN+VPGKL + LGY+ +S++ LIY
Sbjct: 96 SVNRNKKSICIDLK--EGRDVIYELAKKSDVLVENYVPGKLKNMGLGYEDISKVAPHLIY 153
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+G +GPY +RPGYD+IAASIGGLLHITG DG PCKVG+A DLATGLYAHGA++
Sbjct: 154 CSLTGYGYEGPYTNRPGYDVIAASIGGLLHITGPKDGSPCKVGVAVTDLATGLYAHGAIL 213
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
AAL + KT KGQ I CNLLSTQV+ LIN+G+NYLN G EG RWG+ H ++VP++ F T
Sbjct: 214 AALYQRMKTNKGQWIQCNLLSTQVASLINIGSNYLNTGKEGVRWGSEHESIVPYEAFHTK 273
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
+GY+T+GTGSD Q+ D+ K M L L+ +Y
Sbjct: 274 DGYMTVGTGSDAQFLDLLKRMQLLKLSEIDKY 305
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/139 (44%), Positives = 85/139 (61%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+ K M L L+ +Y RVENR L + K KT +EW ++F+G FPY +N
Sbjct: 290 LLKRMQLLKLSEIDKYKNNKARVENRNELLPILREKFRTKTNKEWEIVFKGALFPYGPIN 349
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I QVF D HI+ IKLV+E+ H IK+VGPAV YS +VRT PP +G+HT +LK
Sbjct: 350 TIRQVFEDPHIKHIKLVQEMEHPTGKKIKVVGPAVTYSYATNKVRTAPPMMGQHTTEILK 409
Query: 121 DLLNYDETTIAKLKEKKIL 139
++LNY + I LK+ KI+
Sbjct: 410 NILNYTDDKIQTLKKAKIV 428
>gi|340718613|ref|XP_003397759.1| PREDICTED: caiB/baiF CoA-transferase family protein C7orf10-like
[Bombus terrestris]
Length = 429
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 170/272 (62%), Positives = 219/272 (80%), Gaps = 2/272 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PLS +R+LDLTRIIAGP+CTM+L DLGAE++K+E+P +GDE RKWGPPF+ TE +TYF
Sbjct: 36 PLSGIRVLDLTRIIAGPYCTMILGDLGAEILKIEKPGSGDEARKWGPPFIEGTEEATYFL 95
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNKKS+C+D K EG+ +I +LAK+ D+LVEN+VPGKL + LGY+ +S++ LIY
Sbjct: 96 SVNRNKKSICIDLK--EGRDVIYELAKKSDILVENYVPGKLKNIGLGYEDISKVAPHLIY 153
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+G +GPY +RPGYD+IAASIGGLLHITG DG PCKVG+A DLATGLYAHGA++
Sbjct: 154 CSLTGYGYEGPYTNRPGYDVIAASIGGLLHITGPKDGSPCKVGVAVTDLATGLYAHGAIL 213
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
AAL + KT KGQ I CNLLSTQV+ LIN+G+NYLN+G EG RWG+ H ++VP++ F T
Sbjct: 214 AALYQRMKTNKGQWIQCNLLSTQVASLINIGSNYLNSGKEGVRWGSEHESIVPYEAFHTK 273
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
+GY+T+GTGSD Q+ D+ K M L L+ +Y
Sbjct: 274 DGYMTVGTGSDAQFLDLLKRMQLLKLSKIDKY 305
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 85/139 (61%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+ K M L L+ +Y RV+NR L + K KT +EW ++F+G FPY +N
Sbjct: 290 LLKRMQLLKLSKIDKYKNNEARVKNRNELLPILREKFRTKTNKEWEIVFKGALFPYGPIN 349
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I QVF D HI+ IKLV+E+ H IK+VGPAV YS +VRT PP +G+HT +LK
Sbjct: 350 TIRQVFEDPHIKHIKLVQEMEHSTGKKIKVVGPAVTYSYATNKVRTAPPMMGQHTTEILK 409
Query: 121 DLLNYDETTIAKLKEKKIL 139
++LNY + I LK+ KI+
Sbjct: 410 NILNYTDDKIQTLKKAKIV 428
>gi|322783217|gb|EFZ10803.1| hypothetical protein SINV_06224 [Solenopsis invicta]
Length = 551
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 173/300 (57%), Positives = 223/300 (74%), Gaps = 11/300 (3%)
Query: 199 ENFYSLDLALSS---------ENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVE 249
E F+S L S EN PL+ +R+LDLTRI+AGP+CTM+L DLGAE++K+E
Sbjct: 59 ERFFSSARRLRSCRRKFCTAIENDRSPLNGIRVLDLTRIVAGPYCTMILGDLGAEILKIE 118
Query: 250 QPVTGDECRKWGPPFLNNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVE 309
+P GDE RKWGPPF T+ STYF VNRNKKSVCVD K +G+ +I +LA+ CDVLVE
Sbjct: 119 RPDGGDEARKWGPPFFQGTQDSTYFMSVNRNKKSVCVDLK--KGKDVIYELARTCDVLVE 176
Query: 310 NFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH 369
N+VPGKL+ LGY+ ++ + +LIYCS+TG+GS GPY RPGYD+IAAS+GGLLHITG
Sbjct: 177 NYVPGKLNSFGLGYEDVARVAPRLIYCSLTGYGSHGPYASRPGYDVIAASLGGLLHITGP 236
Query: 370 PDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANY 429
DGPPCKVG+A D+ATGLYAHGA+MAALL + KT KGQ I CNLLSTQ++ LIN+ +NY
Sbjct: 237 KDGPPCKVGVAMTDMATGLYAHGAIMAALLQRSKTNKGQWIQCNLLSTQIACLINIASNY 296
Query: 430 LNAGIEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
LN E RWG+ H ++VP++ F T +GY+TIG GSD Q+ ++ K + + LA D ++ T
Sbjct: 297 LNGNKEATRWGSEHESIVPYEAFPTKDGYMTIGVGSDLQFLELVKRLQMPELATDDKFKT 356
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 71/115 (61%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+ K + + LA D ++ T RV NR L K + EKT +EW I +G SFPY +N
Sbjct: 339 LVKRLQMPELATDDKFKTNIARVTNRTELLKILRDTFKEKTNQEWSAILEGASFPYGAIN 398
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHT 115
+I +VF D H++DIKLV+E+ H G +K+VGP V YS VR+PPP LG+HT
Sbjct: 399 NIREVFDDPHVKDIKLVQEVDHPVTGKVKLVGPPVTYSYATNVVRSPPPTLGQHT 453
>gi|195390665|ref|XP_002053988.1| GJ24187 [Drosophila virilis]
gi|194152074|gb|EDW67508.1| GJ24187 [Drosophila virilis]
Length = 442
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 165/274 (60%), Positives = 222/274 (81%), Gaps = 2/274 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL VRILDLTRI+AGP+CTM+LADLGAEVIKVE+P GDE RKWGPPFL + + YF
Sbjct: 49 PLRGVRILDLTRIVAGPYCTMVLADLGAEVIKVERPHFGDEARKWGPPFLEQSGDAAYFL 108
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
NRNK+SVC+D K G++++ LA +CDVLVEN+VPG L+R LGY+ L ++N +LIY
Sbjct: 109 AQNRNKRSVCIDMK--RGKELMHQLAGKCDVLVENYVPGTLERYGLGYEQLRQVNPRLIY 166
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
C+++G+GS GPY RPGYD+IA+S+GGLLHITG DGPP KVG+A D+ATGLYAHGA++
Sbjct: 167 CTISGYGSVGPYAKRPGYDVIASSMGGLLHITGERDGPPSKVGVAVTDVATGLYAHGAIL 226
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
AALL + +T +GQKID +LLST S+LINV +NYLNAG E +RWGT+H+++VP+Q FKT+
Sbjct: 227 AALLQRERTQRGQKIDVDLLSTCCSLLINVASNYLNAGTEAQRWGTAHSSIVPYQSFKTA 286
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+GY+T+G GSD Q+ ++C+ +N++ ++ D ++ T
Sbjct: 287 DGYLTLGAGSDAQFVELCRRLNIEPVSQDAKFKT 320
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 87/139 (62%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ +N++ ++ D ++ T RV++RE L + T++ W+ F+G SF VN
Sbjct: 303 LCRRLNIEPVSQDAKFKTNKDRVQHREELVALLAQILARDTSKNWMQQFEGASFVVGPVN 362
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI +VF DEHIQ I LVK++ H + G +K+VGP V YS + + RT PP LGEHTD VL
Sbjct: 363 SIREVFEDEHIQAIGLVKKLPHARDGSVKVVGPPVVYSEARNDARTAPPMLGEHTDEVLA 422
Query: 121 DLLNYDETTIAKLKEKKIL 139
LL Y IA L+E++I+
Sbjct: 423 KLLGYGADRIAALREQRII 441
>gi|156554204|ref|XP_001600451.1| PREDICTED: caiB/baiF CoA-transferase family protein C7orf10 homolog
[Nasonia vitripennis]
Length = 406
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 167/284 (58%), Positives = 220/284 (77%), Gaps = 4/284 (1%)
Query: 206 LALSSEN--PSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPP 263
+ LSS N + PL +R+LDL+RI+AGP+CTM+L DLGAE++K+EQP GDE RKWGPP
Sbjct: 1 MRLSSTNVDDTSPLGGIRVLDLSRIVAGPYCTMILGDLGAEILKIEQPGVGDEARKWGPP 60
Query: 264 FLNNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGY 323
F NT STYF VNRNKKSVC+D K +G+ ++ DLA++ D+L+EN+VPGKL ++ LGY
Sbjct: 61 FFQNTNESTYFASVNRNKKSVCIDLK--KGKHVVYDLARKSDILIENYVPGKLSKMGLGY 118
Query: 324 KHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASID 383
+ + LIYCS+TG+GS+GPY RPGYD+IAAS+GGL+HITG DG PCK G+A D
Sbjct: 119 DEIKNVAPHLIYCSLTGYGSEGPYSKRPGYDVIAASLGGLMHITGPKDGAPCKPGVALTD 178
Query: 384 LATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSH 443
LATGLYAHGA+MAALL + KT KGQ I CNLLSTQV+ LIN+G+NYLNAG E KRWG+ H
Sbjct: 179 LATGLYAHGAIMAALLQRMKTNKGQWIQCNLLSTQVATLINIGSNYLNAGKEAKRWGSEH 238
Query: 444 ANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
++VP++ F T +GY+T+GTGSD Q+ D+ + + + L + ++
Sbjct: 239 ESIVPYEAFPTKDGYMTVGTGSDLQFSDLLRKLGMPELQSEEKF 282
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/139 (44%), Positives = 89/139 (64%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+ + + + L + ++ RV+NR L + + K EKT EEW I +G +FPY Q+N
Sbjct: 267 LLRKLGMPELQSEEKFKNNINRVKNRGELLEILRRKFKEKTNEEWNKILEGSTFPYGQIN 326
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ QVF D HI+ IKLVKEI H G +K+VGP V YS + EVR PPP LG+HT +LK
Sbjct: 327 TMKQVFEDPHIKHIKLVKEIDHPVAGKMKVVGPPVKYSHAKNEVRLPPPGLGQHTSEILK 386
Query: 121 DLLNYDETTIAKLKEKKIL 139
++LNY E TI +L+ K++
Sbjct: 387 NVLNYSEQTIEELRSNKVI 405
>gi|328781432|ref|XP_624509.2| PREDICTED: caiB/baiF CoA-transferase family protein C7orf10 [Apis
mellifera]
Length = 427
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 169/272 (62%), Positives = 219/272 (80%), Gaps = 2/272 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PLS +R+LDLTRI+AGP+CTM+L DLGAE++K+E+P +GDE RKWGPPF+ TE +TYF
Sbjct: 34 PLSGIRVLDLTRIVAGPYCTMILGDLGAEILKIEKPESGDEARKWGPPFIQGTEEATYFL 93
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNKKS+C+D K +G+ II +LAK+ DVLVEN+VPGKL ++ LGY+ +S++ LIY
Sbjct: 94 SVNRNKKSICIDLK--KGKDIIYELAKKSDVLVENYVPGKLKKMGLGYEDISKVAPHLIY 151
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+G KGPY +RPGYD+IAASIGGLLHITG +GPPCKVGIA DLATGLYAHGA++
Sbjct: 152 CSLTGYGYKGPYANRPGYDMIAASIGGLLHITGSKNGPPCKVGIAVTDLATGLYAHGAIL 211
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
AAL + T KGQ I CNLL+TQV+ LIN+G+NYLNA E RWG+ H ++VP++ F T
Sbjct: 212 AALYQRMTTKKGQWIQCNLLATQVASLINIGSNYLNANKEAVRWGSEHESIVPYEAFHTK 271
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
+GY+T+GTGSD Q+ D+ K M+L L+ +Y
Sbjct: 272 DGYMTVGTGSDTQFLDLLKRMHLIELSKIDKY 303
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 87/139 (62%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+ K M+L L+ +Y RVENR+ L + K KT +EW ++F+G SFPY +N
Sbjct: 288 LLKRMHLIELSKIDKYKNNKTRVENRDELLSILRKKFETKTNKEWAIVFEGASFPYGPIN 347
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I QVF D HI +K+V+E+ + IK++GPAV YS + +VR PP +G+HT +LK
Sbjct: 348 TIKQVFEDPHINYMKMVQEMEYSTGKKIKVIGPAVTYSYSTNKVRCAPPVMGQHTTEILK 407
Query: 121 DLLNYDETTIAKLKEKKIL 139
++LNY + I LK+ KI+
Sbjct: 408 NILNYTDDKIEALKKVKIV 426
>gi|195060670|ref|XP_001995835.1| GH14164 [Drosophila grimshawi]
gi|193891627|gb|EDV90493.1| GH14164 [Drosophila grimshawi]
Length = 444
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 165/274 (60%), Positives = 222/274 (81%), Gaps = 2/274 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL VRILDLTRI+AGP+CTM+L DLGAEVIKVE+P GDE RKWGPPFL ++ + YF
Sbjct: 51 PLKGVRILDLTRIVAGPYCTMVLGDLGAEVIKVERPHFGDESRKWGPPFLEHSGDAAYFL 110
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
NRNK+S+C+D K G++++++L K DVLVEN+VPG L+R LGY+ L ++N +L+Y
Sbjct: 111 APNRNKQSICIDMK--RGRKLMQELVKISDVLVENYVPGTLERYGLGYEQLRQVNPRLVY 168
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
C+++G+GS GPY RPGYD+IA+S+GGLLHITG DGPP KVG+A D+ATGLYAHGAV+
Sbjct: 169 CTISGYGSVGPYAKRPGYDVIASSMGGLLHITGERDGPPSKVGVAVTDVATGLYAHGAVL 228
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
AALL + +T +GQKID +LLST S+LINV +NYLNAG E KRWGT+H+++VP+Q FKTS
Sbjct: 229 AALLQRQRTQRGQKIDVDLLSTCCSLLINVASNYLNAGTEAKRWGTAHSSIVPYQSFKTS 288
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+GY+TIG GSD Q+ ++C+ + ++ ++L+ R+ T
Sbjct: 289 DGYLTIGAGSDSQFVELCRRLEIEQVSLEDRFKT 322
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 86/139 (61%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + ++ ++L+ R+ T RVE+RE L + T++ W+ +F G SF VN
Sbjct: 305 LCRRLEIEQVSLEDRFKTNRDRVEHREELVNLLGQILARDTSKNWMQLFDGASFVVGPVN 364
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI +VF DEHI+ I LVK + H + +K+VGP V YS + + RT PP LGEHTD VL
Sbjct: 365 SIREVFEDEHIRAIGLVKTLPHPRDVSVKVVGPPVVYSEARNDARTAPPMLGEHTDEVLT 424
Query: 121 DLLNYDETTIAKLKEKKIL 139
+LL Y IA L++++I+
Sbjct: 425 NLLGYGADQIATLRDQRII 443
>gi|125772087|ref|XP_001357536.1| GA10613 [Drosophila pseudoobscura pseudoobscura]
gi|54637271|gb|EAL26673.1| GA10613 [Drosophila pseudoobscura pseudoobscura]
Length = 440
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 166/274 (60%), Positives = 223/274 (81%), Gaps = 2/274 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL VRILDLTRIIAGP+CTM+LADLGAEVIKVE+P GDE RKWGPPFL +++ + YF
Sbjct: 47 PLKGVRILDLTRIIAGPYCTMVLADLGAEVIKVERPHFGDEARKWGPPFLEHSKDAAYFL 106
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
NRNK+SVC+D K G+ ++ LA+ DVLVEN+VPG LDR +LGY+ + ++N +LIY
Sbjct: 107 AQNRNKQSVCIDLK--RGRALLHKLAEISDVLVENYVPGTLDRYDLGYEQMKKVNPKLIY 164
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
C+++G+GS GPY RPGYD+IA+S+GGLLHITG +GPP KVG+A D+ATGLYAHGA++
Sbjct: 165 CTLSGYGSVGPYAKRPGYDVIASSVGGLLHITGEKEGPPSKVGVAVTDVATGLYAHGAIL 224
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
AAL + KT +GQKID +LLST S+LINVG+NYLNAG E +RWGT+H+++VP+Q FKT
Sbjct: 225 AALYQREKTQRGQKIDVDLLSTCCSLLINVGSNYLNAGTEARRWGTAHSSIVPYQSFKTK 284
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+GY+T+G GSD Q+ ++C+++ ++ +A DP++ T
Sbjct: 285 DGYLTLGAGSDAQFVELCRLLEVEPVAEDPKFKT 318
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/139 (44%), Positives = 91/139 (65%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+++ ++ +A DP++ T RV+NRE L + +E + +++ W+ F+G FP VN
Sbjct: 301 LCRLLEVEPVAEDPKFKTNKDRVQNREELVQLLEQILAQDSSKNWMKRFEGAPFPVGPVN 360
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SIS+VF DEHIQ I LVK + H + G +K+VGP V YS + + RT PP LGEHTD VL
Sbjct: 361 SISEVFEDEHIQAIGLVKTLPHTRDGSVKVVGPPVVYSEARNDARTAPPMLGEHTDAVLS 420
Query: 121 DLLNYDETTIAKLKEKKIL 139
DLL Y +A L+E+ I+
Sbjct: 421 DLLGYGPEELASLREQGII 439
>gi|195158930|ref|XP_002020336.1| GL13930 [Drosophila persimilis]
gi|194117105|gb|EDW39148.1| GL13930 [Drosophila persimilis]
Length = 447
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 166/274 (60%), Positives = 223/274 (81%), Gaps = 2/274 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL VRILDLTRIIAGP+CTM+LADLGAEVIKVE+P GDE RKWGPPFL +++ + YF
Sbjct: 54 PLKGVRILDLTRIIAGPYCTMVLADLGAEVIKVERPHFGDEARKWGPPFLEHSKDAAYFL 113
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
NRNK+SVC+D K G+ ++ LA+ DVLVEN+VPG LDR +LGY+ + ++N +LIY
Sbjct: 114 AQNRNKQSVCIDLK--RGRALLHKLAEISDVLVENYVPGTLDRYDLGYEQMKKVNPKLIY 171
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
C+++G+GS GPY RPGYD+IA+S+GGLLHITG +GPP KVG+A D+ATGLYAHGA++
Sbjct: 172 CTLSGYGSVGPYAKRPGYDVIASSVGGLLHITGEKEGPPSKVGVAVTDVATGLYAHGAIL 231
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
AAL + KT +GQKID +LLST S+LINVG+NYLNAG E +RWGT+H+++VP+Q FKT
Sbjct: 232 AALYQREKTQRGQKIDVDLLSTCCSLLINVGSNYLNAGTEARRWGTAHSSIVPYQSFKTK 291
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+GY+T+G GSD Q+ ++C+++ ++ +A DP++ T
Sbjct: 292 DGYLTLGAGSDAQFVELCRLLAVEPVAEDPKFKT 325
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 91/139 (65%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+++ ++ +A DP++ T RV+NRE L + +E + +++ W+ F+G FP VN
Sbjct: 308 LCRLLAVEPVAEDPKFKTNKDRVQNREELVQLLEQILAQDSSKNWMKRFEGAPFPVGPVN 367
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SIS+VF DEHIQ I LVK + H + G +K+VGP V YS + + RT PP LGEHTD VL
Sbjct: 368 SISEVFEDEHIQAIGLVKTLPHTRDGSVKVVGPPVVYSEARNDARTAPPMLGEHTDAVLS 427
Query: 121 DLLNYDETTIAKLKEKKIL 139
DLL Y +A L+++ I+
Sbjct: 428 DLLGYGPEELASLRDQGII 446
>gi|114051806|ref|NP_001040184.1| dermal papilla derived protein 13 [Bombyx mori]
gi|87248311|gb|ABD36208.1| dermal papilla derived protein 13 [Bombyx mori]
Length = 424
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 164/271 (60%), Positives = 217/271 (80%), Gaps = 1/271 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L++V +LDL+RI+AGPFCTM L DLGA VIKVE ++GDE RKWGPPF+ + S YF
Sbjct: 31 LNDVHVLDLSRIVAGPFCTMTLGDLGANVIKVES-LSGDEARKWGPPFMKDCGDSYYFQS 89
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
VNRNKKS+C+DFK+ EG++II DLAK+CDVLVENF+PGKLD++++GY+ L +N +LIYC
Sbjct: 90 VNRNKKSICIDFKSQEGKKIIYDLAKKCDVLVENFIPGKLDQMDVGYEKLKTVNPKLIYC 149
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
++TG G +GPY +PGYD+IAA++GGLLH TG +G P K G+A D+ GL+A GA+MA
Sbjct: 150 AITGLGPRGPYTKKPGYDVIAAAMGGLLHTTGERNGNPVKTGVAITDITKGLHAFGAIMA 209
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
AL H+ TG+GQKIDCNLLSTQ+S +IN+ YLN G+EG+RWGT+HAN+VP+Q FKT +
Sbjct: 210 ALYHRNSTGRGQKIDCNLLSTQISSMINIATIYLNCGVEGQRWGTAHANLVPYQAFKTKD 269
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
GY+ IGTGS+ Q+ D CK++N + L D R+
Sbjct: 270 GYMVIGTGSNPQFADFCKLINREDLITDERF 300
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 82/139 (58%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
CK++N + L D R+ + RVENR+ + K I + KT+ EW +F+ +FP +N
Sbjct: 285 FCKLINREDLITDERFKDNSNRVENRDEIIKIISDVIITKTSREWSALFKDATFPNGPIN 344
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ VF DEH+++I LVKE+ H G +K+VGP +S RT PP LG+HT +L
Sbjct: 345 TMKDVFDDEHVKEIGLVKELQHTSAGTLKVVGPPTEFSEGGNLARTAPPTLGQHTTDILS 404
Query: 121 DLLNYDETTIAKLKEKKIL 139
D L Y E+ I L EK IL
Sbjct: 405 DFLGYPESKIQGLFEKNIL 423
>gi|242007503|ref|XP_002424579.1| alpha methylacyl-CoA racemase, putative [Pediculus humanus
corporis]
gi|212508022|gb|EEB11841.1| alpha methylacyl-CoA racemase, putative [Pediculus humanus
corporis]
Length = 498
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 161/268 (60%), Positives = 222/268 (82%), Gaps = 1/268 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL N+RILDLTRI+AGP+CTM+L DLGA++IK+E+ +GDE R+WGPPF+N+T + YF
Sbjct: 43 PLKNIRILDLTRIVAGPYCTMILGDLGADIIKIEKLGSGDETRRWGPPFVNDTTETCYFV 102
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
+NRNKKSVC+D K EG++II +L+K+CDVL+ENFVPGKL++L LGY+ + +++ +IY
Sbjct: 103 GLNRNKKSVCIDLKVQEGKEIIMNLSKKCDVLIENFVPGKLNKLGLGYEDVKKVSPHIIY 162
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+G KGPYK +PGYD+IAAS GGLL ITG +GPPCK G+A D+ATGLYAHGA++
Sbjct: 163 CSLTGYGWKGPYKHKPGYDVIAASYGGLLSITGPENGPPCKPGVAMTDIATGLYAHGAIL 222
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
AAL + KTG+GQ IDCNL STQ++ LIN+G+NYLNAG EGK+WG SHA++VP++ ++TS
Sbjct: 223 AALFQRLKTGQGQHIDCNLFSTQLACLINIGSNYLNAGQEGKKWGNSHASIVPYRSYETS 282
Query: 456 NG-YVTIGTGSDKQYQDMCKVMNLQHLA 482
+ Y+TIG GSD Q++++C + + ++
Sbjct: 283 DAEYLTIGAGSDSQFEELCNRLEITFIS 310
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 69/101 (68%)
Query: 15 RYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEHIQDI 74
+Y + RV NR L I+ K MEK+ +EWL+I +G SFP+ VN ISQVF D+HI++I
Sbjct: 316 KYKKNSDRVLNRVELDDIIQNKIMEKSLKEWLIILEGSSFPFGPVNKISQVFNDKHIKEI 375
Query: 75 KLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHT 115
L+KE++H+ G IK+VGP V +S + V PPP LGEHT
Sbjct: 376 NLIKEVNHDIAGKIKMVGPPVEFSNSPNNVCLPPPILGEHT 416
>gi|321474071|gb|EFX85037.1| hypothetical protein DAPPUDRAFT_194168 [Daphnia pulex]
Length = 425
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 167/292 (57%), Positives = 224/292 (76%), Gaps = 2/292 (0%)
Query: 210 SENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE 269
S S L+ V++LDLTR++AGP+CT +L DLGA+++KVE+ GD+ R WGPPF+ NT
Sbjct: 26 SSTVSDALAGVKVLDLTRVLAGPYCTQILGDLGADILKVERLKVGDDTRSWGPPFVGNT- 84
Query: 270 LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEI 329
S YF +NRNK+S+C+D K+ EG++II+ LA Q DVLVEN++PGK++ LGY+ L +I
Sbjct: 85 -SCYFISINRNKQSICIDLKSEEGKKIIEQLAMQSDVLVENYLPGKMEEYGLGYEDLKKI 143
Query: 330 NSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLY 389
N QLIYCS+TG+GS GPY RPGYD+IA+SIGGL+HITG DG PCK G+A DLATGLY
Sbjct: 144 NPQLIYCSITGYGSTGPYASRPGYDVIASSIGGLIHITGPEDGAPCKTGVALTDLATGLY 203
Query: 390 AHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPH 449
AHGA+MAAL + KT GQ+I NLLSTQV+ L+N+G+NYL AG E KRWGT+H ++VP+
Sbjct: 204 AHGAIMAALFQRQKTNTGQRISANLLSTQVACLVNLGSNYLMAGQEAKRWGTAHESIVPY 263
Query: 450 QVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
Q F TS+GYVT+G +D+Q++++C + L+ DP+YLT AL + S L+
Sbjct: 264 QAFPTSDGYVTVGGTNDRQFRELCSRICRSDLSSDPKYLTNALRVKHRSELV 315
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 86/139 (61%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L+ DP+YLT ALRV++R L EI K+ EW+ +F+G F Y +N
Sbjct: 286 LCSRICRSDLSSDPKYLTNALRVKHRSELVDEIGKTLATKSNSEWMELFRGAHFSYGPIN 345
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
S+S+VFAD +Q ++V+EI H G +K+VGP V +S T +R PPP LG+HT+ VL+
Sbjct: 346 SLSEVFADPQVQHNRMVQEIDHPSAGTLKLVGPPVEFSNTGNYIRLPPPELGQHTESVLQ 405
Query: 121 DLLNYDETTIAKLKEKKIL 139
D L Y I +L+E I+
Sbjct: 406 DRLGYSSVQIQQLRENGII 424
>gi|307170834|gb|EFN62945.1| Uncharacterized protein C7orf10-like protein [Camponotus
floridanus]
Length = 519
Score = 367 bits (943), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 167/271 (61%), Positives = 213/271 (78%), Gaps = 3/271 (1%)
Query: 211 ENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL 270
EN S PL+ +R+LDLTRI+AGP+CTM+L DLGAE++K+E+P GDE RKWGPPF T+
Sbjct: 63 ENRS-PLNGIRVLDLTRIVAGPYCTMILGDLGAEILKIERPGDGDEARKWGPPFFEGTQE 121
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
STYF VNRNKKSVC+D K G+ II DLA+ CDVLVEN+VPGKL+ + LGY+ +++I
Sbjct: 122 STYFMSVNRNKKSVCIDLK--RGKDIIYDLAQTCDVLVENYVPGKLNSIGLGYEDIAKIA 179
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYA 390
+LIYCS+TG+G +GPY +RPGYD+IAAS+GGLLHITG DGPPCKVG+A DLA GLYA
Sbjct: 180 PRLIYCSLTGYGFQGPYANRPGYDVIAASLGGLLHITGPKDGPPCKVGVAMTDLAMGLYA 239
Query: 391 HGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQ 450
HGA+MAALL + K KGQ I CNLLSTQV+ LIN+ +NYLN E RWG+ H ++VP++
Sbjct: 240 HGAIMAALLQRSKINKGQWIQCNLLSTQVASLINIASNYLNGNKEATRWGSEHESIVPYE 299
Query: 451 VFKTSNGYVTIGTGSDKQYQDMCKVMNLQHL 481
F T +GY+T+G GSD Q+ ++ K + L L
Sbjct: 300 AFPTKDGYMTVGAGSDLQFLELIKRLQLSEL 330
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 61/109 (55%), Gaps = 4/109 (3%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+ K + L L + ++ RV+NR L + + KT +EW IF+G SFPY VN
Sbjct: 321 LIKRLQLSELINNNKFKNNTARVKNRMELLQILRNVFKRKTNQEWSAIFEGASFPYGAVN 380
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQ----PEVR 105
+I +VF D H++ IKLV+E+ H G +K+VGP V YS P VR
Sbjct: 381 TIKEVFDDPHVKYIKLVQELDHPVTGKVKLVGPPVTYSYATNTDVPTVR 429
>gi|195569438|ref|XP_002102716.1| GD20057 [Drosophila simulans]
gi|194198643|gb|EDX12219.1| GD20057 [Drosophila simulans]
Length = 441
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 164/274 (59%), Positives = 222/274 (81%), Gaps = 2/274 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL +RILDL+RIIAGP+CTM+LADLGAEVIKVE+P GDE RKWGPPFL N+ + YF
Sbjct: 48 PLHGIRILDLSRIIAGPYCTMVLADLGAEVIKVERPHFGDEARKWGPPFLKNSNDAAYFL 107
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
NRNK+S+C+D K G Q++ LA+ DVLVEN+VPG L+R LGY+ L ++N +LIY
Sbjct: 108 APNRNKRSICIDIK--RGTQLLHRLAEISDVLVENYVPGTLERYGLGYEQLRKVNPKLIY 165
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+GS GPY RPGYD+IA+S+GGL+HITG DGPP KVG+A D++TGLYAHGA++
Sbjct: 166 CSMTGYGSVGPYAKRPGYDVIASSVGGLMHITGERDGPPSKVGVAVTDMSTGLYAHGAIL 225
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
AAL + +T +GQKI+ +LLST S+L+NVG+NYLN+G+E R GT+H+++VP+Q FKT
Sbjct: 226 AALYQRTRTQRGQKIEVDLLSTCCSLLLNVGSNYLNSGVEAGRMGTAHSSIVPYQSFKTK 285
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+GY+T+GTGSD Q++D+C+ + ++HLA +P++ T
Sbjct: 286 DGYLTLGTGSDVQFEDLCRRLKVEHLAQNPKFKT 319
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 88/139 (63%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + ++HLA +P++ T RV NR L +E + T+ W+ +F+G SFP VN
Sbjct: 302 LCRRLKVEHLAQNPKFKTNKDRVTNRVELLGILEQMLAKDTSRNWMKLFEGASFPVGPVN 361
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI +VF DEHI+ I LVK + H K G +K+VGP V +S + + RT PP LG+HTD VL
Sbjct: 362 SIPEVFEDEHIKAIGLVKSLRHPKDGTVKVVGPPVTFSEARNDARTAPPILGQHTDEVLG 421
Query: 121 DLLNYDETTIAKLKEKKIL 139
+LL Y +AKLK+ I+
Sbjct: 422 ELLGYGPDELAKLKKDNII 440
>gi|47228518|emb|CAG05338.1| unnamed protein product [Tetraodon nigroviridis]
Length = 425
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 167/297 (56%), Positives = 216/297 (72%), Gaps = 3/297 (1%)
Query: 206 LALSSENPSL-PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPF 264
L+ S P+L PL R+LDL+R++AGPF TM+L DLGAEVIKVE+P TGDE R WGPPF
Sbjct: 9 LSSSQPGPNLRPLEGTRVLDLSRVLAGPFTTMILGDLGAEVIKVERPDTGDETRAWGPPF 68
Query: 265 LNNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYK 324
+ S YF VNRNKKS+CVD K P G II++LA CDVLVENF+PGKLD++NLGY+
Sbjct: 69 VGKE--SVYFLSVNRNKKSICVDLKHPRGANIIQELAGVCDVLVENFLPGKLDKMNLGYE 126
Query: 325 HLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDL 384
LS N QLIYCS++G+G GP PGYD IA+++ G++HITG DG P + G+A DL
Sbjct: 127 DLSRRNPQLIYCSISGYGQTGPQAQAPGYDSIASAVSGMMHITGPEDGEPVRPGVAMTDL 186
Query: 385 ATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHA 444
ATGLYAHGA+MAALL + KTG G IDCNLLS+QVS L ++ ANYL G E +RWGT+H
Sbjct: 187 ATGLYAHGAIMAALLQRQKTGTGGHIDCNLLSSQVSCLSHIAANYLTGGREARRWGTAHE 246
Query: 445 NVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
++VP+Q F+T +G++ I G+DKQ+ +C+V+ + L +P+Y T L + LI
Sbjct: 247 SIVPYQAFRTKDGHMVIAAGNDKQFAKVCQVLPVTQLTEEPKYKTNRLRVQNRKQLI 303
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 84/148 (56%), Gaps = 9/148 (6%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+V+ + L +P+Y T LRV+NR+ L + + +E+TT EWL F+G P +N
Sbjct: 274 VCQVLPVTQLTEEPKYKTNRLRVQNRKQLIHTLSERCLEQTTGEWLRRFEGSGVPVGPIN 333
Query: 61 SISQVFADEH---------IQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPAL 111
S+ +VF+D ++ L+ E+ H G I + GPAV YS +P TPPP +
Sbjct: 334 SMKEVFSDAQDFIGGGCFQVKHNDLIMEMKHPTAGFIHVPGPAVRYSSFRPPEATPPPLI 393
Query: 112 GEHTDYVLKDLLNYDETTIAKLKEKKIL 139
G+HT VL+D L+Y + I L E K++
Sbjct: 394 GQHTTQVLRDTLSYSQDAIKSLLEAKVV 421
>gi|195353968|ref|XP_002043473.1| GM23184 [Drosophila sechellia]
gi|194127614|gb|EDW49657.1| GM23184 [Drosophila sechellia]
Length = 441
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 164/274 (59%), Positives = 221/274 (80%), Gaps = 2/274 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL +RILDL+RIIAGP+CTM+LADLGAEVIKVE+P GDE RKWGPPFL N+ + YF
Sbjct: 48 PLHGIRILDLSRIIAGPYCTMVLADLGAEVIKVERPHFGDEARKWGPPFLENSNDAAYFV 107
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
NRNK+S+C+D K G Q++ LA+ DVLVEN+VPG L+R LGY+ L ++N +LIY
Sbjct: 108 APNRNKRSICIDIK--RGTQLLHRLAEISDVLVENYVPGTLERYGLGYEQLRKVNPKLIY 165
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+GS GPY RPGYD+IA+S+GGL+HITG DGPP KVG+A D++TGLYAHGA++
Sbjct: 166 CSMTGYGSVGPYAKRPGYDVIASSVGGLMHITGERDGPPSKVGVAVTDMSTGLYAHGAIL 225
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
AAL + +T +GQKI+ +LLST S+L+NVG+NYLN+G+E R GT+H+++VP+Q FKT
Sbjct: 226 AALYQRTRTQRGQKIEVDLLSTCCSLLLNVGSNYLNSGVEAGRMGTAHSSIVPYQSFKTK 285
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+GY+T+GTGSD Q++D+C+ + + HLA +P++ T
Sbjct: 286 DGYLTLGTGSDVQFEDLCRRLKVDHLAQNPKFKT 319
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/139 (44%), Positives = 86/139 (61%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + + HLA +P++ T RV NR L +E E T+ W+ +F+G SFP VN
Sbjct: 302 LCRRLKVDHLAQNPKFKTNKDRVTNRVELLGILEQMLAEDTSRNWMKLFEGASFPVGPVN 361
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI +VF DEHI+ I LVK + H K G +K+VGP V +S + + RT PP LG+HTD VL
Sbjct: 362 SIPEVFEDEHIKAIGLVKSLRHPKDGTVKVVGPPVTFSEARNDARTAPPILGQHTDKVLG 421
Query: 121 DLLNYDETTIAKLKEKKIL 139
LL Y +AKLK+ I+
Sbjct: 422 QLLGYGPDELAKLKKDNII 440
>gi|24648431|ref|NP_650894.1| CG10877 [Drosophila melanogaster]
gi|7300628|gb|AAF55777.1| CG10877 [Drosophila melanogaster]
gi|21430400|gb|AAM50878.1| LP04613p [Drosophila melanogaster]
gi|220950176|gb|ACL87631.1| CG10877-PA [synthetic construct]
Length = 441
Score = 357 bits (917), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 164/274 (59%), Positives = 221/274 (80%), Gaps = 2/274 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL +RILDL+RIIAGP+CTM+LADLGAEVIKVE+P GDE RKWGPPFL N+ + YF
Sbjct: 48 PLHGIRILDLSRIIAGPYCTMVLADLGAEVIKVERPHFGDEARKWGPPFLKNSNDAAYFL 107
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
NRNK+S+C+D K G Q++ LA+ DVLVEN+VPG L+R LGY+ L ++N +LIY
Sbjct: 108 APNRNKRSICIDIK--RGTQLLHRLAEISDVLVENYVPGTLERYGLGYEQLRKVNPKLIY 165
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+GS GPY RPGYD+IA+S+GGL+HITG DGPP KVG+A D++TGLYAHGA++
Sbjct: 166 CSMTGYGSVGPYAKRPGYDVIASSVGGLMHITGERDGPPSKVGVAVTDMSTGLYAHGAIL 225
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
AAL + +T +GQKI+ +LLST S+L+NVG+NYLN+G+E R GT+H+++VP+Q FKT
Sbjct: 226 AALYQRTRTQRGQKIEVDLLSTCCSLLLNVGSNYLNSGVEAGRMGTAHSSIVPYQSFKTK 285
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+GY+T+GTGSD Q+ D+C+ + ++HLA +P++ T
Sbjct: 286 DGYLTLGTGSDVQFVDLCRRLKVEHLAQNPKFKT 319
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 87/139 (62%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + ++HLA +P++ T RV NR L +E E T+ W+ +F+G SFP VN
Sbjct: 302 LCRRLKVEHLAQNPKFKTNKDRVTNRVELLGILEQMLSEDTSRNWMKLFEGASFPVGPVN 361
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI +VF DEHI+ I LVK + H K +K+VGP V +S + + RT PP LG+HTD VL
Sbjct: 362 SIPEVFEDEHIKAIGLVKSLRHPKDETVKVVGPPVTFSEARNDARTAPPILGQHTDEVLG 421
Query: 121 DLLNYDETTIAKLKEKKIL 139
+LL Y +AKLK+ I+
Sbjct: 422 ELLGYGPDELAKLKKDNII 440
>gi|118776939|ref|XP_560906.4| Anopheles gambiae str. PEST AGAP012657-PA [Anopheles gambiae str.
PEST]
gi|119114312|ref|XP_319185.3| AGAP010040-PA [Anopheles gambiae str. PEST]
gi|116118356|gb|EAA13858.3| AGAP010040-PA [Anopheles gambiae str. PEST]
gi|116133189|gb|EAL42176.2| AGAP012657-PA [Anopheles gambiae str. PEST]
Length = 305
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 164/275 (59%), Positives = 208/275 (75%), Gaps = 22/275 (8%)
Query: 215 LPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYF 274
PL VRILDLTRI+AGP+CTM+L DLGAEV K+E+P GDE RKWGPP
Sbjct: 1 FPLEGVRILDLTRIVAGPYCTMVLGDLGAEVYKIERPYEGDESRKWGPP----------- 49
Query: 275 TCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLI 334
VCV+ KT G+++I +LA++CDVLVEN+VPGKLD L LGY+ L I L+
Sbjct: 50 ---------VCVNLKT--GREVIYELAEKCDVLVENYVPGKLDSLGLGYETLKSIAPSLV 98
Query: 335 YCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAV 394
YCS+TGFGS+GPYK +PGYD+IAAS+GGLLHITG DGPP KVGIA D+ATGLYAHGA+
Sbjct: 99 YCSITGFGSEGPYKAKPGYDVIAASMGGLLHITGSEDGPPAKVGIAITDIATGLYAHGAI 158
Query: 395 MAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKT 454
+AALL +++TG+GQKID NL STQV+ LINV +NYLNAG E KRWGT+H ++VP++ FKT
Sbjct: 159 LAALLQRHRTGRGQKIDVNLFSTQVACLINVASNYLNAGKEAKRWGTAHESIVPYEAFKT 218
Query: 455 SNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
GY+T+G GSD Q+ +C+++ + LA D R+ +
Sbjct: 219 KTGYITLGCGSDAQFVSLCRLLGVAELAQDERFAS 253
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 41/70 (58%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+++ + LA D R+ + RV +R+ L + K++ +W+ IF+G SFP +N
Sbjct: 236 LCRLLGVAELAQDERFASNRTRVSHRKELIAILSDILKSKSSSDWMHIFEGASFPVGPIN 295
Query: 61 SISQVFADEH 70
S+ +VF D H
Sbjct: 296 SMKEVFEDRH 305
>gi|194899751|ref|XP_001979421.1| GG15379 [Drosophila erecta]
gi|190651124|gb|EDV48379.1| GG15379 [Drosophila erecta]
Length = 439
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 162/272 (59%), Positives = 221/272 (81%), Gaps = 2/272 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL +RILDL+RIIAGP+CTM+LADLGAEVIKVE+P GDE RKWGPPFL N+ + YF
Sbjct: 46 PLHGIRILDLSRIIAGPYCTMVLADLGAEVIKVERPHFGDEARKWGPPFLENSNDAAYFL 105
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
NRNK+S+C+D K G Q++ LA+ DVLVEN+VPG L+R LGY+ L ++N +LIY
Sbjct: 106 APNRNKRSICIDIK--RGTQLLHRLAEISDVLVENYVPGTLERYGLGYEQLRKVNPKLIY 163
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+GS GPY RPGYD+IA+S+GGL+HITG DGPP KVG+A D++TGLYAHGA++
Sbjct: 164 CSMTGYGSVGPYAKRPGYDVIASSVGGLMHITGERDGPPSKVGVAVTDMSTGLYAHGAIL 223
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
AAL + +T +GQKI+ +LLST S+L+NVG+NYLN+G++ R GT+H+++VP+Q FKT
Sbjct: 224 AALYQRTRTQRGQKIEVDLLSTCCSLLLNVGSNYLNSGVKAGRMGTAHSSIVPYQSFKTK 283
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
+GY+T+GTGSD Q++D+C+ + ++HLA +P++
Sbjct: 284 DGYLTLGTGSDAQFEDLCRRLKVEHLAQNPKF 315
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 87/139 (62%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + ++HLA +P++ + RV NR L +E + T+ W+ +F+G SFP VN
Sbjct: 300 LCRRLKVEHLAQNPKFKSNKDRVTNRVELLGILEQMLSQDTSRNWMKLFEGASFPVGPVN 359
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I +VF DEHI+ I LVK + H K G +K+VGP V +S + + RT PP LG+HTD VL
Sbjct: 360 AIPEVFEDEHIKAIGLVKSLQHPKDGTVKVVGPPVTFSEARNDARTAPPILGQHTDEVLG 419
Query: 121 DLLNYDETTIAKLKEKKIL 139
+LL +A+LK+ I+
Sbjct: 420 ELLGCGPDELAELKKDNII 438
>gi|195498217|ref|XP_002096429.1| GE25064 [Drosophila yakuba]
gi|194182530|gb|EDW96141.1| GE25064 [Drosophila yakuba]
Length = 439
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 162/274 (59%), Positives = 221/274 (80%), Gaps = 2/274 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL +RILDL+RIIAGP+CTM+LADLGAEVIKVE+P GDE RKWGPPFL N+ + YF
Sbjct: 46 PLHGIRILDLSRIIAGPYCTMVLADLGAEVIKVERPHFGDEARKWGPPFLENSNDAAYFL 105
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
NRNK+S+C+D K G Q++ L + DVLVEN+VPG L+R LGY+ L ++N +LIY
Sbjct: 106 APNRNKRSICIDIK--RGTQLLHRLVEISDVLVENYVPGTLERYGLGYEQLRKVNPKLIY 163
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+GS GPY RPGYD+IA+S+GGL+HITG DGPP KVG+A D++TGLYAHGA++
Sbjct: 164 CSMTGYGSVGPYAKRPGYDVIASSVGGLMHITGERDGPPSKVGVAVTDMSTGLYAHGAIL 223
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
AAL + +T +GQKI+ +LLST S+L+NVG+NYLN+G++ R GT+H+++VP+Q FKT
Sbjct: 224 AALYQRTRTQRGQKIEVDLLSTCCSLLLNVGSNYLNSGVKAGRMGTAHSSIVPYQSFKTK 283
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+GY+T+GTGSD Q++D+C+ + ++HLA +P++ T
Sbjct: 284 DGYLTLGTGSDVQFEDLCRRLKVEHLAQNPKFKT 317
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 88/139 (63%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + ++HLA +P++ T RV NR L + +E E T+ W+ +F+G SFP VN
Sbjct: 300 LCRRLKVEHLAQNPKFKTNKDRVSNRVELLRILEQMLSEGTSRNWMKLFEGASFPVGPVN 359
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI +VF DEHI+ I LVK + H K G +K+VGP V +S + + RT PP LG+HTD VL
Sbjct: 360 SIPEVFEDEHIKAIGLVKSLRHPKDGTVKVVGPPVTFSEARNDARTAPPILGQHTDEVLG 419
Query: 121 DLLNYDETTIAKLKEKKIL 139
+LL +AKLK+ I+
Sbjct: 420 ELLGCGPDELAKLKKDNII 438
>gi|196001721|ref|XP_002110728.1| hypothetical protein TRIADDRAFT_23229 [Trichoplax adhaerens]
gi|190586679|gb|EDV26732.1| hypothetical protein TRIADDRAFT_23229 [Trichoplax adhaerens]
Length = 431
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 157/286 (54%), Positives = 217/286 (75%), Gaps = 2/286 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL +++LDLTR++AGP+ TM+L DLGAEVIK+E+P GD+ R WGPPF+N+ STYF
Sbjct: 36 PLRGIKVLDLTRVLAGPYTTMVLGDLGAEVIKIEKPGDGDDTRSWGPPFVNSE--STYFL 93
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
+NRNKKSV VD K EG +++ LA CD+L+EN++PGKLD+ L Y+ + E + +IY
Sbjct: 94 SINRNKKSVVVDLKRSEGSNLVRKLAASCDILIENYLPGKLDKYRLDYESIRESSPGIIY 153
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS++G+GS GPY++RPGYD+IAA IGGLLHITG G PCK GI D+ATGLYA +++
Sbjct: 154 CSISGYGSDGPYRNRPGYDVIAAGIGGLLHITGPEGGDPCKAGIPVTDMATGLYASTSII 213
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
AAL+ K+K+G GQKI+CNLL+TQV+ML V A YLN G+E RWGT+H ++VP+Q FKT+
Sbjct: 214 AALVEKHKSGVGQKIECNLLNTQVAMLSYVAAAYLNGGLEWHRWGTAHGSIVPYQAFKTA 273
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
+ Y+ +G G++ Q+Q +CK++ L +LA DPR+ T L + + LI
Sbjct: 274 DSYIVVGAGNNTQFQQLCKIIQLDNLADDPRFKTNDLRVKYRNDLI 319
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 80/139 (57%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK++ L +LA DPR+ T LRV+ R L + + + TT +WL + FPY +N
Sbjct: 290 LCKIIQLDNLADDPRFKTNDLRVKYRNDLINTLSERFQQATTSKWLERLENCGFPYGPIN 349
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I QV D + L++ + + + I+GPAV +S +Q +R+PPP LG+HT VLK
Sbjct: 350 TIGQVLNDPQVVHNGLIQTVENANSDKVDIIGPAVTFSESQNRIRSPPPLLGQHTREVLK 409
Query: 121 DLLNYDETTIAKLKEKKIL 139
L D+ I +L ++ I+
Sbjct: 410 AELGLDKDNIDRLHKENII 428
>gi|336455132|ref|NP_001229612.1| uncharacterized protein LOC585781 [Strongylocentrotus purpuratus]
Length = 434
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 161/278 (57%), Positives = 212/278 (76%), Gaps = 2/278 (0%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTY 273
S PL+ +R++DLTR++AGPFC+MLL DLGAEVIK+E+P GDE R WGPPF+N S Y
Sbjct: 37 SSPLAGIRVVDLTRVLAGPFCSMLLGDLGAEVIKIERPGVGDETRHWGPPFINGE--SCY 94
Query: 274 FTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQL 333
F VNRNKKS+ V+ K P+G +++K L DVL+EN++PGKL+ L LGY L E N L
Sbjct: 95 FLSVNRNKKSLAVNLKHPKGIEVVKKLVASSDVLLENYIPGKLEELGLGYDSLRETNPGL 154
Query: 334 IYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGA 393
IYCS+TG+G GPY +R GYD+IAA +GGL++ITG +G PCKVG+A DL+TGLYA GA
Sbjct: 155 IYCSITGYGQTGPYSERGGYDLIAAGLGGLMNITGPQEGDPCKVGVAMTDLSTGLYAKGA 214
Query: 394 VMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFK 453
++AALLH+ +TG+GQ+ID NLLSTQVS+L ++ NYL G E KR GT H ++VP+Q FK
Sbjct: 215 ILAALLHRMQTGEGQRIDTNLLSTQVSLLTHLATNYLMDGREAKRRGTQHESIVPYQAFK 274
Query: 454 TSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
T++GY+ IG G+D+ +Q +CK + L LA DP+Y T A
Sbjct: 275 TADGYLIIGAGNDRAFQTLCKRICLSELAEDPQYKTNA 312
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 81/141 (57%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK + L LA DP+Y T A RV NR++L + + EK T +W+ + +G FPY +N
Sbjct: 293 LCKRICLSELAEDPQYKTNAQRVLNRDVLLPVLSKRLSEKKTSDWMEVLEGCGFPYGPIN 352
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ QVF D ++ LV+EI H G +++ G AV YS + P P LG+HT +L
Sbjct: 353 TMGQVFDDPQVKHNDLVQEIDHPTAGTMRVPGHAVQYSTISTKENFPSPLLGQHTADILT 412
Query: 121 DLLNYDETTIAKLKEKKILGL 141
+LL Y ++ + +L K + L
Sbjct: 413 NLLGYTKSQVEELHRDKAIAL 433
>gi|241617653|ref|XP_002406953.1| L-carnitine dehydratase, putative [Ixodes scapularis]
gi|215500914|gb|EEC10408.1| L-carnitine dehydratase, putative [Ixodes scapularis]
Length = 403
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 156/263 (59%), Positives = 202/263 (76%), Gaps = 2/263 (0%)
Query: 225 LTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTCVNRNKKSV 284
RI+AGP+CTM+L DLGAEVIK+E+P GDE R WGPPF+ + S YF VNRNKKSV
Sbjct: 13 FRRILAGPYCTMILGDLGAEVIKIEKPFIGDETRNWGPPFI--ADQSCYFLSVNRNKKSV 70
Query: 285 CVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSK 344
+D K PEG +++ +A CDV +EN++PGKLD L LGYK + + Q++YCSVTG+ +
Sbjct: 71 AIDLKKPEGASLVRKIATTCDVFMENYLPGKLDTLGLGYKDIEAVAPQIVYCSVTGYNPR 130
Query: 345 GPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKT 404
GPY+DR GYD+IAAS+GGLLHITG DG PCKVG+A D+ TGLYAHGAVMAALL + T
Sbjct: 131 GPYRDRAGYDVIAASMGGLLHITGPADGEPCKVGVAITDICTGLYAHGAVMAALLQRQTT 190
Query: 405 GKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNGYVTIGTG 464
GKGQ I+CNLLSTQ++ L N+ +NYLNAG E R GT H ++VP+ F+T +G++T+G
Sbjct: 191 GKGQWINCNLLSTQIACLANIASNYLNAGKEATRQGTGHESIVPYAAFETLDGHLTVGAA 250
Query: 465 SDKQYQDMCKVMNLQHLALDPRY 487
S+KQ+Q MCKVM+L +A+D R+
Sbjct: 251 SEKQFQAMCKVMSLPQVAVDTRF 273
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 65/126 (51%), Gaps = 13/126 (10%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
MCKVM+L +A+D R+ A RV++RE L + K T+EWL +F+G PY +
Sbjct: 258 MCKVMSLPQVAVDTRFKDNASRVKHREALTDILNRVFKSKPTQEWLSLFEGSEIPYGPIQ 317
Query: 61 SISQVFADEHIQD----IKLVKE--ISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEH 114
++ QVF D I ++ + H GPAV + VR+PPP LGEH
Sbjct: 318 NMQQVFQDPQASRRNSCITVITTLCVPHNP-------GPAVEFGAAINAVRSPPPLLGEH 370
Query: 115 TDYVLK 120
TD + K
Sbjct: 371 TDELYK 376
>gi|432926534|ref|XP_004080875.1| PREDICTED: caiB/baiF CoA-transferase family protein C7orf10-like
[Oryzias latipes]
Length = 448
Score = 351 bits (901), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 153/272 (56%), Positives = 204/272 (75%), Gaps = 2/272 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL +++LDLTR++AGPF TM+L DLGAEVIKVE+P GD+ R WGPPF+ + S YF
Sbjct: 50 PLEGIKVLDLTRVLAGPFATMILGDLGAEVIKVERPGVGDDTRAWGPPFVGSE--SVYFL 107
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
+NRNKKS+ VD K P G Q++++LA CDVLVEN++PGKL + LG+ L E+N QLIY
Sbjct: 108 SINRNKKSLAVDLKNPRGAQVVRELAGMCDVLVENYLPGKLQEMGLGFDQLGEVNPQLIY 167
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS++G+G GP PGYD IA+++ G++HITG DG P + G+A DLATGLYAHGA+M
Sbjct: 168 CSISGYGQTGPQAQSPGYDSIASAVSGMMHITGPEDGEPVRPGVAMTDLATGLYAHGAIM 227
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
AALL KTG+G IDCNLLS+QVS L ++ +NYLNAG E KRWGT+H ++VP+Q F+T
Sbjct: 228 AALLQLQKTGRGGHIDCNLLSSQVSCLSHIASNYLNAGKEAKRWGTAHESIVPYQGFRTK 287
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
+G++ + G+DKQ+ +C+V+ L L DP Y
Sbjct: 288 DGHIVVAAGNDKQFVQVCQVLELIELTQDPNY 319
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 81/135 (60%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+V+ L L DP Y + LRV+NR+ L + + + ++ T +WL F+G S P +N
Sbjct: 304 VCQVLELIELTQDPNYKSNKLRVKNRKKLLQTLSQRFQQEKTADWLRRFEGSSVPVGPIN 363
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI +VF++ ++ L++E+ H G I + GPAV +S P TPPP +G+HT VL+
Sbjct: 364 SIREVFSEPQVKHNALIQEMKHPTAGRIAVPGPAVRFSSFPPSGPTPPPLIGQHTVQVLR 423
Query: 121 DLLNYDETTIAKLKE 135
L+YD+ I+ L E
Sbjct: 424 HTLSYDDGLISTLLE 438
>gi|405953986|gb|EKC21539.1| CaiB/baiF CoA-transferase family protein C7orf10 [Crassostrea
gigas]
Length = 437
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 158/281 (56%), Positives = 211/281 (75%), Gaps = 2/281 (0%)
Query: 209 SSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNT 268
S+ + PLS R+LDL+R++AGP+CTM+L DLGAEVIKVE+P +GD+ R WGPPF
Sbjct: 37 SARQTNGPLSGYRVLDLSRVLAGPYCTMILGDLGAEVIKVERPGSGDDTRSWGPPF--KG 94
Query: 269 ELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSE 328
+ + YF VNRNKKSV VD KT +GQ II+ LA +CDVLVEN++PGKL + NLGY L
Sbjct: 95 QEAVYFLTVNRNKKSVAVDIKTRKGQNIIRQLASKCDVLVENYIPGKLAQYNLGYDQLKT 154
Query: 329 INSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGL 388
+LIYCS++G+G GPY R GYD+I + + GL+HITG DG PCKVG+A DL+TGL
Sbjct: 155 ECPRLIYCSISGYGQTGPYAKRAGYDVIVSGVAGLMHITGPKDGEPCKVGVAMTDLSTGL 214
Query: 389 YAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVP 448
YAHGA+MAA+L + K+G+GQ IDC+L STQV+ LIN+G N+LNAGIE R GT+H ++VP
Sbjct: 215 YAHGAIMAAILQRQKSGQGQHIDCDLFSTQVASLINIGGNFLNAGIEATRHGTAHPSIVP 274
Query: 449 HQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+Q FKT + Y+ +G G+D Q++ +CK + L+ L D ++ T
Sbjct: 275 YQAFKTQDSYILVGAGNDGQFRLLCKRLGLEQLIEDKKFST 315
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 76/139 (54%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK + L+ L D ++ T RV NR+ L ++ TT+ WL + + PY +N
Sbjct: 298 LCKRLGLEQLIEDKKFSTNKARVTNRKELLDLLKKMFNTNTTQYWLDLLENSGIPYGPIN 357
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+++ VF+D ++++ I H GDI++ GP V +S + + PP LG+HTD+VL
Sbjct: 358 NMAAVFSDPQTIHNRMIQTIQHPDIGDIRVPGPPVRFSDFPRDAPSAPPTLGQHTDHVLS 417
Query: 121 DLLNYDETTIAKLKEKKIL 139
++L I +L+ + ++
Sbjct: 418 NILQLQPKEIERLRVEGVV 436
>gi|156406058|ref|XP_001641048.1| predicted protein [Nematostella vectensis]
gi|156228185|gb|EDO48985.1| predicted protein [Nematostella vectensis]
Length = 407
Score = 348 bits (892), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 153/276 (55%), Positives = 212/276 (76%), Gaps = 2/276 (0%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTY 273
S PL+ VR+LD+TR++AGPF MLLADLGAEVIKVE+P +GD+ R WGPPF S+Y
Sbjct: 4 SAPLAGVRVLDMTRVLAGPFAAMLLADLGAEVIKVEKPGSGDDTRSWGPPFCKTE--SSY 61
Query: 274 FTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQL 333
F VNRNKKS+ V+ K+ EG ++ +L+K+CDVL+EN++PGKLD+ LGY LS++N L
Sbjct: 62 FLSVNRNKKSIAVNMKSKEGSSLLIELSKKCDVLLENYLPGKLDKFGLGYDSLSKLNPSL 121
Query: 334 IYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGA 393
IYCS+TG+G GPY RPGYD++ +++GGL+HITG DG PCKVG+A DL TGLYAHGA
Sbjct: 122 IYCSITGYGPGGPYDQRPGYDVVVSAMGGLMHITGPEDGDPCKVGVAMTDLCTGLYAHGA 181
Query: 394 VMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFK 453
+MAAL+ + KT GQKIDC+LLS+Q+++L ++ +YLN G R+GT+H ++VP+QVF
Sbjct: 182 IMAALIQREKTKIGQKIDCSLLSSQIAVLSHIATSYLNTGFVTGRYGTAHHSIVPYQVFP 241
Query: 454 TSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
T +G++ +G G+D ++ +CKV+ + L DP+Y T
Sbjct: 242 TKDGHIMVGAGNDGLFKKLCKVIEMPRLTEDPKYKT 277
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 78/136 (57%), Gaps = 1/136 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CKV+ + L DP+Y T RV+ R L + K E+ + EWL + + P A +N
Sbjct: 260 LCKVIEMPRLTEDPKYKTNNARVQYRHELIPILADKLTERESNEWLPLLEEYGIPSAPIN 319
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAY-SLTQPEVRTPPPALGEHTDYVL 119
+I QVFAD +Q LV+E+ H G++K+ PAV Y +T+ + PP LG+HT VL
Sbjct: 320 NIKQVFADPQVQYKNLVQEVDHPTIGNVKLPAPAVEYDGVTRLVTPSAPPLLGQHTTEVL 379
Query: 120 KDLLNYDETTIAKLKE 135
+D+L D++ I L +
Sbjct: 380 RDILGCDQSLIKSLHQ 395
>gi|334343612|ref|XP_001371185.2| PREDICTED: caiB/baiF CoA-transferase family protein C7orf10-like
[Monodelphis domestica]
Length = 474
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 160/286 (55%), Positives = 210/286 (73%), Gaps = 2/286 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL V+ILDLTR++AGPF TM L DLGAEVIKVE+P GD+ R WGPPF+ S YF
Sbjct: 72 PLDGVKILDLTRVLAGPFSTMNLGDLGAEVIKVERPGAGDDTRTWGPPFVGLE--SIYFL 129
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNKKS+ V+ K P+G+QII++LA CDVLVEN+VPGKL + LGY+ L E+ +IY
Sbjct: 130 SVNRNKKSISVNIKHPKGRQIIRELAAVCDVLVENYVPGKLSEMGLGYEDLKEVAPHIIY 189
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+G GP R GYD +A++I GLLHITG DG P + G+A DLATGL+A G+++
Sbjct: 190 CSITGYGQTGPMSARAGYDAVASAISGLLHITGPEDGDPVRPGVAMTDLATGLFATGSIL 249
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
A LL +++TG+G IDCNLLS+QV+ L +V ANYL AG E KRWGT+H ++VP+Q F+T
Sbjct: 250 AGLLQRHRTGRGLHIDCNLLSSQVACLSHVAANYLIAGREAKRWGTAHGSIVPYQAFRTK 309
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
+GY+ +G G+D+ + MCKV+NL L D RY T AL + + L+
Sbjct: 310 DGYLVVGAGNDQHFVTMCKVLNLPSLLGDSRYRTNALRVQNRAELV 355
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 81/140 (57%), Gaps = 2/140 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
MCKV+NL L D RY T ALRV+NR L + A+ E+ T WL F+G PY +N
Sbjct: 326 MCKVLNLPSLLGDSRYRTNALRVQNRAELVALLSARFAEEMTRTWLSRFEGSGIPYGPIN 385
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYS-LTQPEVRTPPPALGEHTDYVL 119
S+ +VFA+ + L+ E+ H G I + GPAV YS T E + PPP LG+HT VL
Sbjct: 386 SMQEVFAEPQVLHNGLIMEMDHPTAGKISVPGPAVRYSGFTMAEPK-PPPLLGQHTVEVL 444
Query: 120 KDLLNYDETTIAKLKEKKIL 139
K L YD++TI L ++
Sbjct: 445 KTSLGYDDSTIGDLLRAGVV 464
>gi|327275129|ref|XP_003222326.1| PREDICTED: caiB/baiF CoA-transferase family protein C7orf10-like
[Anolis carolinensis]
Length = 405
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 154/272 (56%), Positives = 206/272 (75%), Gaps = 2/272 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL+ VRILDLTR++AGPF TM L DLGAEVIKVE+P TGD+ R WGPPF+ N S YF
Sbjct: 7 PLTGVRILDLTRVLAGPFATMNLGDLGAEVIKVEKPGTGDDTRSWGPPFVGNE--SVYFL 64
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNKKS+ +D K P+G +IIK+LA DV VEN++PGKL + LGY++++++ Q++Y
Sbjct: 65 SVNRNKKSIAIDLKNPKGAKIIKELAAVSDVFVENYIPGKLAAMGLGYENINKVAPQIVY 124
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+G GP R GYD +AA++ GLLHITG G P + G+A DLATGLYA+GA+M
Sbjct: 125 CSITGYGQTGPKCQRAGYDSVAAAVSGLLHITGTEGGEPVRPGVAMTDLATGLYAYGAIM 184
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
AALL ++ TGKG IDCNLLS+QV+ L + +N+LN E KRWGT HA++VP+Q FKT
Sbjct: 185 AALLQRHTTGKGMHIDCNLLSSQVACLTYIASNFLNCKTETKRWGTGHASIVPYQGFKTK 244
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
+GY+ +G G+D Q+ +CK++NL ++ DP+Y
Sbjct: 245 DGYIVVGAGNDNQFATVCKILNLTEISHDPKY 276
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 84/145 (57%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK++NL ++ DP+Y RV NR+ L + A+ +E+ T +WL +F+G PY +N
Sbjct: 261 VCKILNLTEISHDPKYKNNQQRVLNRKELIGILSARFLEEETTKWLELFEGSGVPYGPIN 320
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
S+ QVFAD + +LV E++H G I + GPAV YS Q PPP +G+HT +LK
Sbjct: 321 SMKQVFADSQVLHNELVMEMNHPTVGKIAVPGPAVRYSQFQVSEPKPPPLIGQHTLEILK 380
Query: 121 DLLNYDETTIAKLKEKKILGLIERL 145
D L Y + + +L ++ E +
Sbjct: 381 DTLGYKDDDLQELLNSGVVAQHEHI 405
>gi|198425775|ref|XP_002125098.1| PREDICTED: similar to Uncharacterized protein C7orf10 (Dermal
papilla-derived protein 13) [Ciona intestinalis]
Length = 404
Score = 344 bits (882), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 148/272 (54%), Positives = 213/272 (78%), Gaps = 3/272 (1%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L+ VR+LD++RI+AGPF +M+L D+GAE++K+E P GD R+WGPPFL + S YF
Sbjct: 10 LNGVRVLDMSRILAGPFASMILGDMGAEIVKIEHPEVGDGTREWGPPFLGSE--SAYFIS 67
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
+NRNKKSV V+ K +G IIK L K+ DVL+EN++PG+LDR+ GY+ + +IN L+YC
Sbjct: 68 INRNKKSVGVNIKHEKGADIIKKLVKKSDVLMENYIPGQLDRMGFGYEEIKQINESLVYC 127
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S+TG+GS GPY R GYD+IA+S+ GL HITG +G PC+ G+A D++TGL+AHGA++A
Sbjct: 128 SITGYGSDGPYATRAGYDVIASSVAGLNHITGPENGDPCRAGVAMTDMSTGLFAHGAILA 187
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
ALLH+ KTG GQKI+CNLLSTQVSML +V ++YLNAG+E KRWGT HA++VP+Q FKT +
Sbjct: 188 ALLHREKTGLGQKIECNLLSTQVSMLTHVASSYLNAGLEAKRWGTGHASIVPYQSFKTKD 247
Query: 457 G-YVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
G ++T+G G++K ++ +C+++ ++ L + ++
Sbjct: 248 GKFLTVGAGNNKHFEKLCQLLKVEDLITNNKF 279
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+++ ++ L + ++ RV NR L + KT E+WL+I + FPY +N
Sbjct: 264 LCQLLKVEDLITNNKFRDNKDRVVNRVELIGILSEIFQAKTMEDWLVILEDCGFPYGPIN 323
Query: 61 SISQVFADEHIQDIKLVKEISHEKYG-DIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVL 119
++ + F D + K++ E+ H G +I+I P V YS T PP LG+HT VL
Sbjct: 324 NMEETFNDPQVLHNKMIMEMDHPACGRNIRIPAPPVRYSSHSYLDATSPPTLGQHTREVL 383
Query: 120 KDLLNYDETTIAKL 133
+L+++ + I +L
Sbjct: 384 SNLVDFTDEQIDEL 397
>gi|291394706|ref|XP_002713724.1| PREDICTED: dermal papilla derived protein 13 [Oryctolagus
cuniculus]
Length = 408
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 159/286 (55%), Positives = 208/286 (72%), Gaps = 2/286 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL V+ILDLTR++AGPF TM L DLGAEVIKVE+P GD+ R WGPPF+ STYF
Sbjct: 10 PLEGVKILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRTWGPPFVGTE--STYFL 67
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNKKS+ V+ K P+G +IIK+LA CDV VEN+VPGKL + LGY+ + +I +IY
Sbjct: 68 SVNRNKKSIAVNIKDPKGVKIIKELAAVCDVFVENYVPGKLSAMGLGYEAIDKIAPHIIY 127
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TGFG GP R GYD +A+++ GL+HITG DG P + G+A DLATGLYA+GA+M
Sbjct: 128 CSITGFGQTGPMSQRAGYDAVASAVSGLMHITGPEDGAPVRPGVAMTDLATGLYAYGAIM 187
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
A L+ +YKTGKG IDCNLLSTQV+ L +V ANYL + E KRWGT+H ++VP+Q FKT
Sbjct: 188 AGLIQRYKTGKGMFIDCNLLSTQVACLTHVAANYLISQKEAKRWGTAHGSIVPYQAFKTK 247
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
+GY+ +G G+++Q+ +CK+++L L D +Y T L + LI
Sbjct: 248 DGYLIVGAGNNQQFTTVCKILSLPELIDDSKYKTNRLRVQNRKELI 293
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 80/133 (60%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK+++L L D +Y T LRV+NR+ L K + + E+ T +WL +F+G PY +N
Sbjct: 264 VCKILSLPELIDDSKYKTNRLRVQNRKELIKTLSTRFEEEMTSKWLQLFEGSGVPYGPIN 323
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ VFA+ + L+ E+ H G I + GPAV YS + PPP LG+HT ++LK
Sbjct: 324 NMKDVFAEPQVLHNGLIMEMKHPTVGKISVPGPAVRYSKFKMSEARPPPLLGQHTKHILK 383
Query: 121 DLLNYDETTIAKL 133
++L YD+ I +L
Sbjct: 384 EVLRYDDRAIGEL 396
>gi|345318144|ref|XP_001508123.2| PREDICTED: caiB/baiF CoA-transferase family protein C7orf10-like
[Ornithorhynchus anatinus]
Length = 591
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 159/286 (55%), Positives = 212/286 (74%), Gaps = 2/286 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL +V+ILDLTR++AGPF TM L DLGAEVIKVE+P +GD+ R WGPPF+ TE STYF
Sbjct: 45 PLEDVKILDLTRVLAGPFATMNLGDLGAEVIKVERPGSGDDTRTWGPPFVG-TE-STYFL 102
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNKKS+ +D K P G +I+K+LA CDVLVEN+VPGKL + LGY+ ++++ ++Y
Sbjct: 103 SVNRNKKSIAIDIKDPSGVKIVKELAAACDVLVENYVPGKLLEMGLGYEDINKVAPHIVY 162
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+G GP R GYD +A+++ GL+HITG DG P + G+A DLATGLYA+GA+M
Sbjct: 163 CSITGYGQTGPMSQRAGYDAVASAVSGLMHITGPEDGDPVRPGVAMTDLATGLYAYGAIM 222
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
A LL KYKTGKG IDCNLLS+QV+ L V ANYL A E +RWGT+H ++VP+Q F+T
Sbjct: 223 AGLLQKYKTGKGLHIDCNLLSSQVACLTQVAANYLIARKEARRWGTAHGSIVPYQAFRTK 282
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
+GY+ +G G+D+Q+ +CK+++L L D R+ T L + LI
Sbjct: 283 DGYLVVGAGNDQQFAVVCKILSLPELIDDARFKTNQLRVQNRKELI 328
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 87/152 (57%), Gaps = 3/152 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK+++L L D R+ T LRV+NR+ L + A+ E T +WL +F+G PY +N
Sbjct: 299 VCKILSLPELIDDARFKTNQLRVQNRKELIGILSARFAEGMTTKWLHLFEGSGIPYGPIN 358
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
S+ VFA+ + LV E+ H G I + GPAV YS PPP LG+HT+ +L+
Sbjct: 359 SMQSVFAEPQVLHNGLVMEMDHPTVGKIAVPGPAVRYSQFPMSEPRPPPLLGQHTEEILR 418
Query: 121 DLLNYDETTIAKLKEKKILGLIERLTKNADPV 152
+ L YD++ +A L + G++E+ N+ V
Sbjct: 419 NTLGYDDSAVADLLRR---GVVEQHEVNSTAV 447
>gi|357607661|gb|EHJ65626.1| dermal papilla derived protein 13 [Danaus plexippus]
Length = 516
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 156/256 (60%), Positives = 200/256 (78%), Gaps = 1/256 (0%)
Query: 236 MLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTCVNRNKKSVCVDFKTPEGQQ 295
M L DLGA VIKVE + GDE RKWGPPF+ ++ S YF VNRNKKS+CVD KT EG+
Sbjct: 1 MTLGDLGANVIKVES-LEGDEARKWGPPFVKDSTDSYYFLSVNRNKKSICVDLKTQEGKN 59
Query: 296 IIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDI 355
II DLAK+CDV+VENF+PGKLD+LN+GY+ L EIN Q+IYC++TGFG GPY ++PGYD+
Sbjct: 60 IIYDLAKKCDVVVENFLPGKLDKLNVGYEKLKEINKQIIYCAITGFGPNGPYANKPGYDV 119
Query: 356 IAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLL 415
IAA++GGLL+ TG DG P K G+A D+ TGL+A GA+M AL +++KTG+GQKIDCNL
Sbjct: 120 IAAAMGGLLNSTGEKDGNPVKPGVAITDVTTGLHAFGAIMTALYYRHKTGRGQKIDCNLF 179
Query: 416 STQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKV 475
STQ+S +IN+ YLN GIE +RWGT+HAN+VP+Q FKT +G + IGTGS+ Q+ D CK+
Sbjct: 180 STQISSMINIANIYLNCGIEAQRWGTAHANLVPYQAFKTMDGDIVIGTGSNAQFADFCKL 239
Query: 476 MNLQHLALDPRYLTGA 491
+N + L LD R+ A
Sbjct: 240 INREDLILDDRFKDNA 255
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 86/139 (61%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
CK++N + L LD R+ A RV +R+ + + I + KT +EW IF+ SFP VN
Sbjct: 236 FCKLINREDLILDDRFKDNASRVRHRDEIVRIIGEVMITKTRKEWTQIFKNASFPNGPVN 295
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ VF DEH+++I+LVKE+ HEK G IK+VGP YS VR PP LG+HT +L
Sbjct: 296 NMRDVFNDEHVREIELVKELQHEKAGTIKMVGPPTVYSEGGNSVRFAPPTLGQHTQMILS 355
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ L Y++ I +L + K++
Sbjct: 356 NFLGYNDDKIKELMQNKVV 374
>gi|363730053|ref|XP_003640760.1| PREDICTED: caiB/baiF CoA-transferase family protein C7orf10 [Gallus
gallus]
Length = 454
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 159/286 (55%), Positives = 206/286 (72%), Gaps = 2/286 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL V+ILDLTR++AGPF TM L DLGAEVIKVE+P TGD+ R WGPPF+ S YF
Sbjct: 56 PLDGVKILDLTRVLAGPFATMNLGDLGAEVIKVERPGTGDDTRAWGPPFVGTE--SVYFL 113
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNKKS+ ++ K G ++I++LA DV VEN++PGKL + LGY+ +++I ++Y
Sbjct: 114 SVNRNKKSIAINMKNSRGAKLIRELAAVSDVFVENYIPGKLAEIGLGYEDIAKIAPHIVY 173
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+G GP R GYD IAA+I GL HITGH G P +VG+A DLATGLYA GA+M
Sbjct: 174 CSITGYGQTGPMVQRGGYDSIAAAISGLTHITGHEGGEPVRVGVAMTDLATGLYACGAIM 233
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
A LL KYKTGKG IDCNLLS+QV+ L +V ANYLN IE KRWGT+H ++VP+Q FKT
Sbjct: 234 AGLLQKYKTGKGMHIDCNLLSSQVACLTHVAANYLNCKIEAKRWGTAHGSIVPYQAFKTE 293
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
+GY+ +G G+D+Q+ +C+++NL + D RY T L + LI
Sbjct: 294 DGYIVVGAGNDQQFVTVCQILNLPEVIKDSRYKTNKLRVQNRKELI 339
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 80/139 (57%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+++NL + D RY T LRV+NR+ L + + EKTT EWL +F+G PY +N
Sbjct: 310 VCQILNLPEVIKDSRYKTNKLRVQNRKELIDILSTRFSEKTTVEWLQLFEGSGVPYGPIN 369
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ QVF++ + +LV E+ H G I + GP V YS PPP +G+HT +LK
Sbjct: 370 NMQQVFSEPQVLHNELVMEMDHPIAGRIAVPGPGVRYSEFVVSHPKPPPLVGQHTVEILK 429
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L Y++ I +L ++
Sbjct: 430 GMLRYEDDAIEELLRTGVV 448
>gi|354467679|ref|XP_003496296.1| PREDICTED: caiB/baiF CoA-transferase family protein C7orf10 homolog
[Cricetulus griseus]
Length = 401
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 158/277 (57%), Positives = 203/277 (73%), Gaps = 2/277 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL VRILDLTR++AGPF TM L DLGAEVIKVE+P GD+ R WGPPF+N STYF
Sbjct: 3 PLEGVRILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRTWGPPFVNTE--STYFL 60
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNKKS+ V+ K P G +IIK+LA CDV VEN+VPGKL + LGY+ + +I +IY
Sbjct: 61 SVNRNKKSIAVNIKDPRGVRIIKELAAICDVFVENYVPGKLSEMGLGYEDIDKIAPHIIY 120
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+G GP R GYD IA+++ GL+HITG DG P + G+A DLATGL+A+GA+M
Sbjct: 121 CSITGYGQTGPMSQRAGYDAIASAMSGLMHITGPEDGDPVRPGVAMTDLATGLFAYGAIM 180
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
A L+ +Y+TGKG IDCNLLS+QV+ L V ANYL E KRWGT+H ++VP+Q FKT
Sbjct: 181 AGLIQRYRTGKGLFIDCNLLSSQVACLTQVAANYLIGQKEAKRWGTAHGSIVPYQAFKTK 240
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
+GY+ IG G+++Q+ +CK++NL L D +Y T L
Sbjct: 241 DGYLVIGAGNNQQFAVVCKILNLPELIDDSKYKTNHL 277
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 82/133 (61%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK++NL L D +Y T LRV+NR+ L K + ++ E+ T +WL +F+G PY +N
Sbjct: 257 VCKILNLPELIDDSKYKTNHLRVQNRKELVKILSSRFAEEVTAKWLCLFEGSGIPYGPIN 316
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
S+ VF++ + L+ EI+H G I + GPAV YS + PPP LG+HT ++LK
Sbjct: 317 SMKDVFSEAQVLHNGLIMEINHPTAGKISVPGPAVRYSKFKMSEAKPPPLLGQHTKHILK 376
Query: 121 DLLNYDETTIAKL 133
++L YD+ I +L
Sbjct: 377 EVLRYDDRAIGEL 389
>gi|33585816|gb|AAH55852.1| RIKEN cDNA 5033411D12 gene [Mus musculus]
Length = 436
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 158/277 (57%), Positives = 203/277 (73%), Gaps = 2/277 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL VRILDLTR++AGPF TM L DLGAEVIKVE+P GD+ R WGPPF+N STYF
Sbjct: 38 PLEGVRILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRSWGPPFVNTE--STYFL 95
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNKKS+ V+ K P G +I+K+LA CDV VEN+VPGKL + LGY+ + +I +IY
Sbjct: 96 SVNRNKKSIAVNIKDPRGVRIVKELAAICDVFVENYVPGKLSEMGLGYEDIDKIAPHIIY 155
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+G GP R GYD IA+++ GL+HITG DG P + G+A DLATGL+A+GA+M
Sbjct: 156 CSITGYGQTGPMSHRAGYDAIASAMSGLMHITGPEDGDPVRPGVAMTDLATGLFAYGAIM 215
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
A LL +Y+TGKG IDCNLLS+QV+ L V ANYL E KRWGT+H ++VP+Q FKT
Sbjct: 216 AGLLQRYRTGKGLFIDCNLLSSQVACLTQVAANYLIGQKEAKRWGTAHGSIVPYQAFKTK 275
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
+GY+ IG G+++Q+ +CK++NL L D +Y T L
Sbjct: 276 DGYLVIGAGNNQQFAVVCKILNLPELIDDSKYRTNHL 312
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 82/133 (61%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK++NL L D +Y T LRV+NR+ L K + A+ E+ T +WL +F+G PY +N
Sbjct: 292 VCKILNLPELIDDSKYRTNHLRVQNRKELVKILSARFAEEVTAKWLCLFEGSGIPYGPIN 351
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
S+ VF++ + LV E++H G I + GPAV YS + PPP LG+HT ++LK
Sbjct: 352 SLKDVFSEAQVLHNGLVMEMNHPTVGKISVPGPAVRYSKFKMSEAKPPPLLGQHTRHILK 411
Query: 121 DLLNYDETTIAKL 133
++L YDE I KL
Sbjct: 412 EVLRYDEGAIEKL 424
>gi|326922270|ref|XP_003207374.1| PREDICTED: caiB/baiF CoA-transferase family protein C7orf10-like
[Meleagris gallopavo]
Length = 497
Score = 341 bits (874), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 159/286 (55%), Positives = 204/286 (71%), Gaps = 2/286 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL V+ILDLTR++AGPF TM L DLGAEVIKVE+P TGD+ R WGPPF+ S YF
Sbjct: 99 PLDGVKILDLTRVLAGPFATMNLGDLGAEVIKVERPGTGDDTRAWGPPFVGTE--SVYFL 156
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNKKS+ ++ K G ++I++LA DV VEN+VPGKL + LGY+ + +I ++Y
Sbjct: 157 SVNRNKKSIAINMKNSRGAKLIRELAAVSDVFVENYVPGKLAEIGLGYEDIEKIAPHIVY 216
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+G GP R GYD IAA+I GL HITGH G P +VG+A DLATGLY GA+M
Sbjct: 217 CSITGYGQTGPMVQRGGYDSIAAAISGLTHITGHEGGEPVRVGVAMTDLATGLYTCGAIM 276
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
A LL KYKTGKG IDCNLLS+QV+ L +V ANYLN IE KRWGT+H ++VP+Q FKT
Sbjct: 277 AGLLQKYKTGKGMHIDCNLLSSQVACLTHVAANYLNCKIEAKRWGTAHGSIVPYQAFKTK 336
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
+GY+ +G G+D+Q+ +C+++NL + D RY T L + LI
Sbjct: 337 DGYIVVGAGNDQQFVTVCQILNLFEVIKDSRYKTNELRVQNRKELI 382
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 77/133 (57%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+++NL + D RY T LRV+NR+ L + + EKTT EWL +F+G PY +N
Sbjct: 353 VCQILNLFEVIKDSRYKTNELRVQNRKELIDILSTRFSEKTTVEWLQLFEGSGVPYGPIN 412
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ QVF++ + LV E+ H G I + GP V YS PPP +G+HT VLK
Sbjct: 413 NMQQVFSEPQVLHNGLVMEMDHPTAGRIAVPGPGVRYSEFVVSHPKPPPLVGQHTVEVLK 472
Query: 121 DLLNYDETTIAKL 133
+L Y++ I +L
Sbjct: 473 GMLRYEDDAIEEL 485
>gi|395850001|ref|XP_003797592.1| PREDICTED: caiB/baiF CoA-transferase family protein C7orf10 homolog
[Otolemur garnettii]
Length = 432
Score = 341 bits (874), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 159/286 (55%), Positives = 207/286 (72%), Gaps = 2/286 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL V+ILDLTR++AGPF TM L DLGAEVIKVE+P GD+ R WGPPF+ STYF
Sbjct: 34 PLDGVKILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRTWGPPFVRTE--STYFL 91
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNKKS+ V+ K P+G +IIK+LA CDV VEN+VPGKL + LGY+ + +I ++Y
Sbjct: 92 SVNRNKKSIAVNMKDPKGVKIIKELAAICDVFVENYVPGKLSAMGLGYEDIDKIAPHIVY 151
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+G GP R GYD +A++I GL+HITG DG P + G+A DLATGLYA+GA+M
Sbjct: 152 CSITGYGQTGPMSRRAGYDAVASAISGLMHITGPEDGDPVRPGVAMTDLATGLYAYGAIM 211
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
A L+ +YKTGKG IDCNLLS+QV+ L +V ANYL E KRWGT+H ++VP+Q FKT
Sbjct: 212 AGLIQRYKTGKGLFIDCNLLSSQVACLTHVAANYLIGQKEAKRWGTAHGSIVPYQAFKTK 271
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
+GY+ +G G+++Q+ +CK++NL L D RY T L + LI
Sbjct: 272 DGYLVVGAGNNQQFATVCKILNLPELIDDSRYKTNHLRVQNRKELI 317
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 83/133 (62%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK++NL L D RY T LRV+NR+ L K + A+ E+TT +WL +F+G PY +N
Sbjct: 288 VCKILNLPELIDDSRYKTNHLRVQNRKELIKILSARFEEETTSKWLYLFEGSGVPYGPIN 347
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
S+ VFA+ + L+ EI H G+I I GPAV YS + PPP LG+HT +VL+
Sbjct: 348 SMKNVFAEPQVLHNGLIMEIKHPTVGEISIPGPAVRYSKFEMSEARPPPLLGQHTKHVLR 407
Query: 121 DLLNYDETTIAKL 133
+LL YD+ I +L
Sbjct: 408 ELLGYDDRAIEEL 420
>gi|261399886|ref|NP_619595.3| caiB/baiF CoA-transferase family protein C7orf10 homolog [Mus
musculus]
gi|408360016|sp|Q7TNE1.2|CG010_MOUSE RecName: Full=CaiB/baiF CoA-transferase family protein C7orf10
homolog
gi|148700779|gb|EDL32726.1| cDNA sequence AF397014, isoform CRA_b [Mus musculus]
Length = 436
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 158/277 (57%), Positives = 203/277 (73%), Gaps = 2/277 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL VRILDLTR++AGPF TM L DLGAEVIKVE+P GD+ R WGPPF+N STYF
Sbjct: 38 PLEGVRILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRSWGPPFVNTE--STYFL 95
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNKKS+ V+ K P G +I+K+LA CDV VEN+VPGKL + LGY+ + +I +IY
Sbjct: 96 SVNRNKKSIAVNIKDPRGVRIVKELAAICDVFVENYVPGKLSEMGLGYEDIDKIAPHIIY 155
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+G GP R GYD IA+++ GL+HITG DG P + G+A DLATGL+A+GA+M
Sbjct: 156 CSITGYGQTGPMSHRAGYDAIASAMSGLMHITGPEDGDPVRPGVAMTDLATGLFAYGAIM 215
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
A LL +Y+TGKG IDCNLLS+QV+ L V ANYL E KRWGT+H ++VP+Q FKT
Sbjct: 216 AGLLQRYRTGKGLFIDCNLLSSQVACLTQVAANYLIGQKEAKRWGTAHGSIVPYQAFKTK 275
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
+GY+ IG G+++Q+ +CK++NL L D +Y T L
Sbjct: 276 DGYLVIGAGNNQQFAVVCKILNLPELIDDCKYRTNHL 312
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 82/133 (61%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK++NL L D +Y T LRV+NR+ L K + A+ E+ T +WL +F+G PY +N
Sbjct: 292 VCKILNLPELIDDCKYRTNHLRVQNRKELVKILSARFAEEVTAKWLCLFEGSGIPYGPIN 351
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
S+ VF++ + LV E++H G I + GPAV YS + PPP LG+HT ++LK
Sbjct: 352 SLKDVFSEAQVLHNGLVMEMNHPTVGKISVPGPAVRYSKFKMSEAKPPPLLGQHTRHILK 411
Query: 121 DLLNYDETTIAKL 133
++L YDE I KL
Sbjct: 412 EVLRYDEGAIEKL 424
>gi|62079027|ref|NP_001014168.1| caiB/baiF CoA-transferase family protein C7orf10 homolog [Rattus
norvegicus]
gi|71152392|sp|Q68FU4.1|CG010_RAT RecName: Full=CaiB/baiF CoA-transferase family protein C7orf10
homolog
gi|51261264|gb|AAH79348.1| Similar to cDNA sequence AF397014 [Rattus norvegicus]
Length = 436
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 156/277 (56%), Positives = 202/277 (72%), Gaps = 2/277 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL VRILDLTR++AGPF TM L DLGAEVIKVE+P GD+ R WGPPF+N STYF
Sbjct: 38 PLEGVRILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRSWGPPFVNTE--STYFL 95
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNKKS+ V+ K P G +I+K+LA CDV VEN+VPGKL + LGY + +I ++Y
Sbjct: 96 SVNRNKKSIAVNIKDPRGVRIVKELAAICDVFVENYVPGKLSEMGLGYADIDKIAPHIVY 155
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+G GP R GYD IA+++ GL+HITG DG P + G+A DLATGL+A+GA+M
Sbjct: 156 CSITGYGQTGPMSHRAGYDAIASAMSGLMHITGPEDGDPVRPGVAMTDLATGLFAYGAIM 215
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
A L+ +Y+TGKG IDCNLLS+QV+ L V ANYL E KRWGT+H ++VP+Q FKT
Sbjct: 216 AGLIQRYRTGKGLFIDCNLLSSQVACLTQVAANYLIGQKEAKRWGTAHGSIVPYQAFKTK 275
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
+GY+ IG G+++Q+ +CK++NL L D +Y T L
Sbjct: 276 DGYLVIGAGNNQQFAVLCKILNLPELIDDSKYRTNHL 312
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 82/133 (61%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK++NL L D +Y T LRV+NR+ L K + A+ E+ T +WL +F+G PY +N
Sbjct: 292 LCKILNLPELIDDSKYRTNHLRVQNRKELVKILSARFAEEVTAKWLCLFEGSGIPYGPIN 351
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
S+ VF++ + LV E++H G I + GPAV YS + PPP LG+HT ++LK
Sbjct: 352 SLKDVFSEAQVLHNGLVMEMNHPTVGKISVPGPAVRYSKFKMSEAKPPPLLGQHTRHILK 411
Query: 121 DLLNYDETTIAKL 133
++L YDE I +L
Sbjct: 412 EVLRYDEGVIGEL 424
>gi|301756673|ref|XP_002914188.1| PREDICTED: caiB/baiF CoA-transferase family protein C7orf10-like
[Ailuropoda melanoleuca]
Length = 438
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 160/286 (55%), Positives = 208/286 (72%), Gaps = 2/286 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL V+ILDLTR++AGPF TM L DLGAEVIKVE+P GD+ R WGPPF+ TE STYF
Sbjct: 40 PLEGVKILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRTWGPPFVG-TE-STYFL 97
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNKKS+ V+ K P+G +IIK+LA CDV VEN+VPGKL + LGY+ + +I +IY
Sbjct: 98 SVNRNKKSIAVNIKDPKGVKIIKELAAVCDVFVENYVPGKLSAVGLGYEDVDKIAPHIIY 157
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+G GP R GYD +A+++ GL+HITG DG P + G+A DLATGLYA+GA+M
Sbjct: 158 CSITGYGQTGPLSQRAGYDAVASAVSGLMHITGPEDGDPVRPGVAMTDLATGLYAYGAIM 217
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
A L+ +YKTGKG IDCNLLS+QV+ L V ANYL E KRWGT+H ++VP+Q FKT
Sbjct: 218 AGLIRRYKTGKGLFIDCNLLSSQVACLTQVAANYLIGQKEAKRWGTAHGSIVPYQAFKTK 277
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
+GY+ +G G+++Q+ +CK++NL L D +Y T L + LI
Sbjct: 278 DGYLVVGAGNNQQFATVCKILNLPELVDDSKYKTNHLRVQNRKELI 323
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 78/133 (58%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK++NL L D +Y T LRV+NR+ L K + A+ ++ T +WL +F+G Y +N
Sbjct: 294 VCKILNLPELVDDSKYKTNHLRVQNRKELIKILSARFEKEMTSKWLYLFEGSGVAYGPIN 353
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ VF + + L+ E+ H G I + GPAV YS + PPP LG+HT ++LK
Sbjct: 354 DMKNVFTEPQVLHNGLIMEMKHPTVGKISVPGPAVRYSKFKMSEARPPPLLGQHTTHILK 413
Query: 121 DLLNYDETTIAKL 133
++L YD+ + +L
Sbjct: 414 EVLGYDDKAVGEL 426
>gi|426227893|ref|XP_004008049.1| PREDICTED: caiB/baiF CoA-transferase family protein C7orf10 homolog
[Ovis aries]
Length = 437
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 156/274 (56%), Positives = 203/274 (74%), Gaps = 2/274 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL VRILDLTR++AGPF TM L DLGAEVIKVE+P GD+ R WGPPF+ TE STYF
Sbjct: 39 PLEGVRILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRTWGPPFVG-TE-STYFL 96
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNKKS+ V+ K P+G +IIK+LA CDV VEN+VPGKL + LGY+ + +I ++Y
Sbjct: 97 SVNRNKKSIAVNIKDPKGVKIIKELAAVCDVFVENYVPGKLSAMGLGYEDIDKIAPHIVY 156
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+G GP R GYD +A+++ GL+HITG DG P + G+A DLATGLYA+GA+M
Sbjct: 157 CSITGYGQTGPLSHRAGYDAVASAVSGLMHITGPEDGDPVRPGVAMTDLATGLYAYGAIM 216
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
L+ +YKTGKG IDCNLLS+QV+ L V ANYL E KRWGT+H ++VP+Q FKT
Sbjct: 217 TGLIQRYKTGKGLFIDCNLLSSQVACLTQVAANYLIGQKEAKRWGTAHGSIVPYQAFKTK 276
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+GY+ +G G+++Q+ +CK++NL L D +Y T
Sbjct: 277 DGYLVVGAGNNQQFAAVCKILNLPELINDSKYRT 310
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 79/133 (59%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK++NL L D +Y T RV+NR+ L + + + E+ T +WL +F+G PY +N
Sbjct: 293 VCKILNLPELINDSKYRTNHHRVQNRKELIEILSTRFKEEMTSKWLQLFEGSGVPYGPIN 352
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ VFA+ + L+ E+ H G I + GPAV YS + PPP LG+HT ++LK
Sbjct: 353 NMKNVFAEPQVLHNDLIMEMKHPTVGKISVPGPAVRYSKFKMSEARPPPLLGQHTTHILK 412
Query: 121 DLLNYDETTIAKL 133
++L YD+ I +L
Sbjct: 413 EVLRYDDRAIREL 425
>gi|345782963|ref|XP_540366.3| PREDICTED: caiB/baiF CoA-transferase family protein C7orf10 [Canis
lupus familiaris]
Length = 401
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 154/286 (53%), Positives = 207/286 (72%), Gaps = 2/286 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL ++ILD+TR++AGPF TM L DLGAEVIKVE+P GD+ R WGPPF+ S YF
Sbjct: 3 PLEGIKILDMTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRTWGPPFVGRE--SAYFL 60
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNKKS+ V+ K P+G +IIK+LA CDV VEN+VPGKL + LGY+ + +I +IY
Sbjct: 61 SVNRNKKSIAVNIKDPKGVKIIKELAAVCDVFVENYVPGKLSAVGLGYEDIDKIAPHIIY 120
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+G GP R GYD +A++ GGL+HITG DG P + G+A DLATGLYA+GA+M
Sbjct: 121 CSITGYGQTGPLSQRAGYDTVASAFGGLMHITGPKDGDPVRSGVAMTDLATGLYAYGAIM 180
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
A L+ +YKTGKG IDCNLLS+QV+ L ++ ANYL E +RWGT+H ++VP+Q FKT
Sbjct: 181 AGLIQRYKTGKGLFIDCNLLSSQVACLTHIAANYLIGQKEAERWGTAHVSIVPYQAFKTK 240
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
+G++ +G G+++Q+ +CK++NL L DP+Y T L + LI
Sbjct: 241 DGFLVVGVGNNQQFATVCKILNLPELIDDPKYKTNHLRVQNRKELI 286
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 82/133 (61%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK++NL L DP+Y T LRV+NR+ L K + A+ ++ T +WL +F+G Y +N
Sbjct: 257 VCKILNLPELIDDPKYKTNHLRVQNRKELIKILSARFEKEMTSKWLYLFEGSGVAYGPIN 316
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ +VFA+ + L+ E+ H G I + GPAV YS + PPP LG+HT ++LK
Sbjct: 317 NMKEVFAEPQVLHNDLIMEMKHPTAGKIAVPGPAVRYSKFKMSEARPPPLLGQHTTHILK 376
Query: 121 DLLNYDETTIAKL 133
++L YD+ I +L
Sbjct: 377 EVLRYDDKAIGEL 389
>gi|157279981|ref|NP_001098506.1| caiB/baiF CoA-transferase family protein C7orf10 homolog [Bos
taurus]
gi|151555971|gb|AAI49770.1| LOC100125578 protein [Bos taurus]
gi|296488308|tpg|DAA30421.1| TPA: hypothetical protein LOC100125578 [Bos taurus]
Length = 438
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 157/286 (54%), Positives = 207/286 (72%), Gaps = 2/286 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL V+ILDLTR++AGPF TM L DLGAEVIKVE+P GD+ R WGPPF+ TE STYF
Sbjct: 40 PLEGVKILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRTWGPPFVG-TE-STYFL 97
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNKKS+ V+ K P+G +I+K+LA CDV VEN+VPGKL + LGY+ + EI ++Y
Sbjct: 98 SVNRNKKSIAVNIKDPKGVKIVKELAAVCDVFVENYVPGKLSAMGLGYEDIDEIAPHIVY 157
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+G GP R GYD +A+++ GL+HITG DG P + G+A DLATGLYA+GA+M
Sbjct: 158 CSITGYGQTGPLSQRAGYDAVASAVSGLMHITGPEDGDPVRPGVAMTDLATGLYAYGAIM 217
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
L+ +YKTGKG IDCNLLS+QV+ L V ANYL E +RWGT+H ++VP+Q FKT
Sbjct: 218 TGLIQRYKTGKGLFIDCNLLSSQVACLTQVAANYLIGQKEAQRWGTAHGSIVPYQAFKTK 277
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
+GY+ +G G+++Q+ +CK++NL L D +Y T L + LI
Sbjct: 278 DGYLVVGAGNNQQFAAVCKILNLPELINDSKYRTNHLRVQNRKELI 323
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 80/133 (60%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK++NL L D +Y T LRV+NR+ L K + + E+ T +WL +F+G PY +N
Sbjct: 294 VCKILNLPELINDSKYRTNHLRVQNRKELIKILSTRFKEEMTSKWLQLFEGSGVPYGPIN 353
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ VFA+ + L+ E+ H G I + GPAV YS + PPP LG+HT ++LK
Sbjct: 354 NMKNVFAEPQVLHNDLIMEMKHPTVGKISVPGPAVRYSKFKMSEARPPPLLGQHTTHILK 413
Query: 121 DLLNYDETTIAKL 133
++L YD+ I +L
Sbjct: 414 EVLRYDDRAIREL 426
>gi|338723921|ref|XP_001494550.2| PREDICTED: caiB/baiF CoA-transferase family protein C7orf10-like
[Equus caballus]
Length = 429
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 158/286 (55%), Positives = 207/286 (72%), Gaps = 2/286 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL V+ILDLTR++AGPF TM L DLGAE+IKVE+P GD+ R WGPPFL TE S YF
Sbjct: 31 PLEGVKILDLTRVLAGPFATMNLGDLGAEIIKVERPGAGDDTRAWGPPFLG-TE-SVYFL 88
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNKKS+ V+ K P+G +I+K+LA CDV VEN+VPGKL + LGY+ + +I +IY
Sbjct: 89 SVNRNKKSIAVNIKDPKGVKIVKELAAVCDVFVENYVPGKLSAVGLGYEDIDKIAPHIIY 148
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TGFG GP R GYD +A+++ GL+HITG DG P + G+A DLATGLYA+GA+M
Sbjct: 149 CSITGFGQTGPLSRRAGYDSVASAVSGLMHITGPEDGDPVRPGVAMTDLATGLYAYGAIM 208
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
A L+ +YKTGKG +DCNLLS+QV+ L V ANYL E KRWGT+H ++VP+Q FKT
Sbjct: 209 AGLIQRYKTGKGLFVDCNLLSSQVACLTQVAANYLIDQKEAKRWGTAHGSIVPYQAFKTK 268
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
+GY+ +G G+++Q+ +CK++NL L D +Y T L + LI
Sbjct: 269 DGYLVVGAGNNQQFATVCKILNLPELIDDSKYKTNPLRVQNRKELI 314
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 81/133 (60%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK++NL L D +Y T LRV+NR+ L K + A+ E+ T +WL +F+G PY +N
Sbjct: 285 VCKILNLPELIDDSKYKTNPLRVQNRKELIKILSARFEEEMTSKWLYLFEGSGIPYGPIN 344
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ VFA+ + L+ E+ H G I + GPAV YS + PPP LG+HT ++LK
Sbjct: 345 NMKNVFAEPQVLHNGLIMEMKHPTVGKISVPGPAVRYSKFKMSEARPPPLLGQHTTHILK 404
Query: 121 DLLNYDETTIAKL 133
++L YD+ I +L
Sbjct: 405 EVLRYDDRAIEEL 417
>gi|291229578|ref|XP_002734750.1| PREDICTED: CaiB/baiF CoA-transferase family protein C7orf10 homolog
[Saccoglossus kowalevskii]
Length = 380
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 152/253 (60%), Positives = 201/253 (79%), Gaps = 3/253 (1%)
Query: 236 MLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTCVNRNKKSVCVDFKTPEGQQ 295
M+L DLGAE+IK+E+P GDE R WGPPF+++ S YF +NRNKKS+ VD K P G+Q
Sbjct: 1 MILGDLGAEIIKIEKPGVGDETRTWGPPFVDSQ--SCYFLSINRNKKSLAVDLKDPRGKQ 58
Query: 296 IIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDI 355
II +LAK+CDVLVEN+VPGKL + LGY+ L ++ QLIYCS++G+GS GPY +R GYD+
Sbjct: 59 IIIELAKKCDVLVENYVPGKLTSMGLGYEDLHKVAPQLIYCSISGYGSDGPYAERAGYDV 118
Query: 356 IAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLL 415
+AAS+ GLLHITG DG P +VG+A DL+TGLY+HGA+MAALL +YKTGKGQKI+CNLL
Sbjct: 119 VAASMAGLLHITGPQDGEPARVGVAMTDLSTGLYSHGAIMAALLQRYKTGKGQKIECNLL 178
Query: 416 STQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNG-YVTIGTGSDKQYQDMCK 474
STQV++L ++ NYLNAG+E KRWGT H ++VP+Q FKT +G Y+ +G G+DK + +CK
Sbjct: 179 STQVALLTHIAGNYLNAGVEAKRWGTGHGSIVPYQAFKTKDGFYLIVGAGNDKHFSIVCK 238
Query: 475 VMNLQHLALDPRY 487
+++L+ L D RY
Sbjct: 239 LLSLEFLLEDNRY 251
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 86/139 (61%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK+++L+ L D RY +RVENR L + + +K+ +EWL IF+G PY +N
Sbjct: 236 VCKLLSLEFLLEDNRYKGNHMRVENRNTLITTMSDRFSQKSLKEWLDIFEGCGIPYGPIN 295
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ QVF D +Q +V+E+ H G++++ GPAV YS + + PPP LG+H+ VL+
Sbjct: 296 NMQQVFNDPQVQHNNMVQEVQHATVGNVRMTGPAVKYSDSDNSIHLPPPLLGQHSKEVLQ 355
Query: 121 DLLNYDETTIAKLKEKKIL 139
DLL YDE +A L + I+
Sbjct: 356 DLLEYDENEVADLIDNHIV 374
>gi|74227777|dbj|BAE35721.1| unnamed protein product [Mus musculus]
Length = 404
Score = 337 bits (865), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 157/277 (56%), Positives = 202/277 (72%), Gaps = 2/277 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL VRILDLTR++AGPF TM L DLGAEVIKVE+P GD+ R WGPPF+N STYF
Sbjct: 6 PLEGVRILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRSWGPPFVNTE--STYFL 63
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNKKS+ V+ K P G +I+K+LA CDV VEN+VPGKL + LGY+ + +I +IY
Sbjct: 64 SVNRNKKSIAVNIKDPRGVRIVKELAAICDVFVENYVPGKLSEMGLGYEDIDKIAPHIIY 123
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+G GP R GYD IA+++ GL+HITG DG P + G+A DLATGL+A+GA+M
Sbjct: 124 CSITGYGQTGPMSHRAGYDAIASAMSGLMHITGPEDGDPVRPGVAMTDLATGLFAYGAIM 183
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
A LL +Y+TGKG I CNLLS+QV+ L V ANYL E KRWGT+H ++VP+Q FKT
Sbjct: 184 AGLLQRYRTGKGLFIGCNLLSSQVACLTQVAANYLIGQKEAKRWGTAHGSIVPYQAFKTK 243
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
+GY+ IG G+++Q+ +CK++NL L D +Y T L
Sbjct: 244 DGYLVIGAGNNQQFAVVCKILNLPELIDDCKYRTNHL 280
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 82/133 (61%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK++NL L D +Y T LRV+NR+ L K + A+ E+ T +WL +F+G PY +N
Sbjct: 260 VCKILNLPELIDDCKYRTNHLRVQNRKELVKILSARFAEEVTAKWLCLFEGSGIPYGPIN 319
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
S+ VF++ + LV E++H G I + GPAV YS + PPP LG+HT ++LK
Sbjct: 320 SLKDVFSEAQVLHNGLVMEMNHPTVGKISVPGPAVRYSKFKMSEAKPPPLLGQHTRHILK 379
Query: 121 DLLNYDETTIAKL 133
++L YDE I KL
Sbjct: 380 EVLRYDEGAIEKL 392
>gi|328773987|gb|EGF84024.1| hypothetical protein BATDEDRAFT_9127 [Batrachochytrium
dendrobatidis JAM81]
Length = 466
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 155/292 (53%), Positives = 207/292 (70%), Gaps = 6/292 (2%)
Query: 204 LDLALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPP 263
+D+ S + PLS +RILDL+R++AGP+CTM+L D+GAEVIKVE +GD+ R WGPP
Sbjct: 56 IDIPSKSTTTNGPLSGIRILDLSRVLAGPYCTMILGDMGAEVIKVENTGSGDDTRTWGPP 115
Query: 264 FLNNTELST------YFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLD 317
F N + ST YF VNRNKKS+ V+FKTP+G IIK LA DVLVEN++PGKLD
Sbjct: 116 FAPNKDGSTTNQESAYFLGVNRNKKSIQVNFKTPQGLAIIKKLAASADVLVENYIPGKLD 175
Query: 318 RLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKV 377
+ LGY+ + +IN +L+Y S+TG+G GPYK GYD+I + GL+HITG DGPP KV
Sbjct: 176 AIGLGYEAMQKINPRLVYASITGYGPDGPYKSHAGYDLIIEAEAGLMHITGEQDGPPVKV 235
Query: 378 GIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGK 437
G+A D+ TGLY HGA++AAL+ + +TG+GQKID +LL QV+ L N+ NYL AG E K
Sbjct: 236 GVAVTDIITGLYTHGAILAALMARNRTGRGQKIDSSLLECQVAALANIAHNYLVAGQEAK 295
Query: 438 RWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
RWGT H+ +VP+Q F T +G V IG G+DKQ+ +C+ + LA + ++ T
Sbjct: 296 RWGTQHSAIVPYQAFPTQDGDVVIGVGNDKQFAKLCEALKQPDLAFEEKFAT 347
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 78/139 (56%), Gaps = 2/139 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + LA + ++ T RV+NR+ L + +T T +E L + + P+ VN
Sbjct: 330 LCEALKQPDLAFEEKFATNRSRVQNRKELVTNVSRQTY--TRQEMLDMLDTLGIPFGPVN 387
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q F+ + K+V E+ H K G IK+VG V YS T+P VR PPP LG+HT VL
Sbjct: 388 NLEQTFSHPQVLHRKMVVEVDHPKSGKIKLVGVPVKYSDTKPSVRLPPPLLGQHTRNVLV 447
Query: 121 DLLNYDETTIAKLKEKKIL 139
D L + + + +LK K ++
Sbjct: 448 DDLGFSDAEVDELKAKGVV 466
>gi|297288465|ref|XP_002803353.1| PREDICTED: caiB/baiF CoA-transferase family protein C7orf10-like
isoform 1 [Macaca mulatta]
Length = 445
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 157/286 (54%), Positives = 207/286 (72%), Gaps = 2/286 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL V+ILDLTRI+AGPF TM L DLGAEVIKVE+P GD+ R WGPPF+ STY+
Sbjct: 47 PLEGVKILDLTRILAGPFATMNLGDLGAEVIKVERPGVGDDTRTWGPPFVGTE--STYYL 104
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNKKS+ V+ K P+G +IIK+LA CDV VEN+VPGKL + LGY+ + +I +IY
Sbjct: 105 SVNRNKKSIAVNIKDPKGVKIIKELAAVCDVFVENYVPGKLSAMGLGYEDIDKIAPHIIY 164
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+G GP R GYD +A+++ GL+HITG DG P + G+A DLATGLYA+GA+M
Sbjct: 165 CSITGYGQTGPISQRAGYDAVASAVSGLMHITGPEDGDPVRPGVAMTDLATGLYAYGAIM 224
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
A L+ KYKTGKG IDCNLLS+QV+ L ++ ANYL E KRWGT+H ++VP+Q FKT
Sbjct: 225 AGLIRKYKTGKGLFIDCNLLSSQVACLSHIAANYLIVRKEAKRWGTAHGSIVPYQAFKTK 284
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
+GY+ +G G+++Q+ +CK+++L L D +Y T L + LI
Sbjct: 285 DGYIVVGAGNNQQFATVCKILDLPELIDDSKYKTNHLRVQNRKELI 330
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 80/133 (60%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK+++L L D +Y T LRV+NR+ L K + + E+ T +WL +F+G PY +N
Sbjct: 301 VCKILDLPELIDDSKYKTNHLRVQNRKELIKILSERFEEELTSKWLHLFEGSGVPYGPIN 360
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ VFA+ + L+ E+ H G I + GPAV YS + PPP LG+HT ++LK
Sbjct: 361 NMKNVFAEPQVLHNSLIMEMEHPTVGKISVPGPAVRYSKFKMSEARPPPLLGQHTMHILK 420
Query: 121 DLLNYDETTIAKL 133
++L YD+ I +L
Sbjct: 421 EVLRYDDGAIGEL 433
>gi|346471615|gb|AEO35652.1| hypothetical protein [Amblyomma maculatum]
Length = 370
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 148/252 (58%), Positives = 196/252 (77%), Gaps = 2/252 (0%)
Query: 236 MLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTCVNRNKKSVCVDFKTPEGQQ 295
M+L DLGAE+IK+E+P GDE R WGPPFL + S YF VNRNKKSV +DFK PEG
Sbjct: 1 MILGDLGAEIIKIERPGVGDETRNWGPPFLGDQ--SCYFLSVNRNKKSVAIDFKKPEGVD 58
Query: 296 IIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDI 355
++K +A+ DVL+EN++PGKLD L LGY+ + + QL+YCS+TG+G KGPY++R GYD+
Sbjct: 59 LVKKIARSSDVLLENYLPGKLDTLGLGYEDIRTVAPQLVYCSITGYGQKGPYRERAGYDV 118
Query: 356 IAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLL 415
IAAS+GGLLHITG G PCKVG+A DLATGLYAHGAVMAALL + +TG+GQ ++CNL
Sbjct: 119 IAASMGGLLHITGPRGGEPCKVGVAITDLATGLYAHGAVMAALLQRNRTGRGQWVNCNLF 178
Query: 416 STQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKV 475
STQVS+L N+ +NYLNA +E R GTSH ++VP+ F+TS+GY+T+G S+ Q++ C+V
Sbjct: 179 STQVSVLANIASNYLNANLEASRHGTSHESIVPYAAFETSDGYITVGAASEGQFKVFCRV 238
Query: 476 MNLQHLALDPRY 487
+++ L DPR+
Sbjct: 239 LDVNELLSDPRF 250
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 88/139 (63%), Gaps = 4/139 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V+++ L DPR+ RV+NR+ L + + + KTT+EWL +F+G PY +N
Sbjct: 235 FCRVLDVNELLSDPRFQDNPRRVQNRDALAEILNNRFKSKTTKEWLELFEGSGIPYGPIN 294
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I +VF D Q +++ ++ H+ G + +VGPAV +S +VR+PPP LGEHTD VL
Sbjct: 295 TIQKVFEDP--QGKEMIVKLPHKTAGTVSLVGPAVEFSEGVNQVRSPPPLLGEHTDEVLL 352
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ L+ D+ IA+L+ K++
Sbjct: 353 EFLSRDD--IARLRAGKVI 369
>gi|403278426|ref|XP_003930807.1| PREDICTED: caiB/baiF CoA-transferase family protein C7orf10 homolog
[Saimiri boliviensis boliviensis]
Length = 438
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 155/286 (54%), Positives = 207/286 (72%), Gaps = 2/286 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL V+ILDLTR++AGPF TM L DLGAEVIKVE+P GD+ R WGPPF+ STY+
Sbjct: 40 PLEGVKILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRTWGPPFVGTE--STYYL 97
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNKKS+ V+ K P+G +IIK+LA CDV VEN++PGKL + LGY+ + +I +IY
Sbjct: 98 SVNRNKKSIAVNIKDPKGVKIIKELAAVCDVFVENYLPGKLSAMGLGYEDIDKIAPHIIY 157
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+G GP R GYD +A+++ GL+HITG DG P + G+A DLATGLYA+GA+M
Sbjct: 158 CSITGYGQTGPISQRAGYDAVASAVSGLMHITGPEDGEPVRPGVAMTDLATGLYAYGAIM 217
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
A L+ KYKTGKG IDCNLLS+QV+ L ++ ANYL E KRWGT+H ++VP+Q FKT
Sbjct: 218 AGLIQKYKTGKGLFIDCNLLSSQVACLSHIAANYLIGQKEAKRWGTAHGSIVPYQAFKTK 277
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
+GY+ +G G+++Q+ +CK+++L L D +Y T L + LI
Sbjct: 278 DGYLVVGAGNNQQFATVCKILDLPELIDDSKYKTNHLRVQNRKELI 323
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 80/133 (60%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK+++L L D +Y T LRV+NR+ L K + + E+ T +WL +F+G PY +N
Sbjct: 294 VCKILDLPELIDDSKYKTNHLRVQNRKELIKILSERFEEELTSKWLHLFEGSGVPYGPIN 353
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ VFA+ + LV E+ H G I I GPAV YS + PPP LG+HT ++LK
Sbjct: 354 NMKNVFAEPQVLHNGLVMEMEHPTVGKISIPGPAVRYSKFKMSEARPPPLLGQHTTHILK 413
Query: 121 DLLNYDETTIAKL 133
++L YD+ I +L
Sbjct: 414 EVLRYDDRAIEEL 426
>gi|328714359|ref|XP_001949500.2| PREDICTED: caiB/baiF CoA-transferase family protein C7orf10 homolog
[Acyrthosiphon pisum]
Length = 444
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 150/284 (52%), Positives = 213/284 (75%), Gaps = 14/284 (4%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN--------N 267
PL VR++D++R+ AGP+C M+LAD+GA+VIKVE+PV GD+ R++GPPF++
Sbjct: 49 PLDGVRVVDMSRVAAGPYCAMVLADMGADVIKVERPVVGDDSRRYGPPFVDVRGDGGSGE 108
Query: 268 TELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLS 327
+ LS YF +NRNK+SVCVDF+ P+G+ II+ L ++ VL+EN++PG LDR +GY+ L
Sbjct: 109 SRLSLYFVSLNRNKRSVCVDFQQPDGRAIIRKLVERSHVLIENYIPGTLDRHGIGYEDLR 168
Query: 328 EINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATG 387
+IN +L++CS+TG+GSKGP+ +PGYD+IAASIGGL++ TG D P K I DL TG
Sbjct: 169 KINQKLVFCSITGYGSKGPWNQKPGYDVIAASIGGLINATG--DAVPAKCAIPITDLMTG 226
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YAHGA++AAL G G KIDC+LLSTQ+SM+ N+G+NYLNAG+ KRWGT H +VV
Sbjct: 227 MYAHGAILAALYR----GVGDKIDCDLLSTQLSMMFNLGSNYLNAGMLTKRWGTEHESVV 282
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P++ FKTSNG++T GTG++ Q++ C +++ LA D R++ A
Sbjct: 283 PYKAFKTSNGFLTFGTGNEVQFKSFCDRVSIPELATDERFVNNA 326
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 83/139 (59%), Gaps = 1/139 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C +++ LA D R++ A RV+NRE L K IE KT EEW+ IF+GV FPY VN
Sbjct: 307 FCDRVSIPELATDERFVNNACRVKNREQLYKIIEPILESKTNEEWMAIFEGVPFPYGPVN 366
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++Q F +EH++DI +V++I +KIVGPAV + + +R PP LG+HT+ VL
Sbjct: 367 DMAQAFNNEHVKDINIVQDIDCSYNAKLKIVGPAVTFKNSSNAIRREPPLLGQHTNEVLT 426
Query: 121 DLLNYDETTIAKLKEKKIL 139
L Y I L+ K ++
Sbjct: 427 S-LGYSTKEIESLRSKTVI 444
>gi|332239662|ref|XP_003269020.1| PREDICTED: caiB/baiF CoA-transferase family protein C7orf10 homolog
isoform 1 [Nomascus leucogenys]
Length = 445
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 153/277 (55%), Positives = 205/277 (74%), Gaps = 2/277 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL V+ILDLTR++AGPF TM L DLGAEVIKVE+P GD+ R WGPPF+ + STY+
Sbjct: 47 PLEGVKILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRTWGPPFVGSE--STYYL 104
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNKKS+ V+ K P+G +IIK+LA CDV VEN+VPGKL + LGY+ + +I +IY
Sbjct: 105 SVNRNKKSIAVNIKDPKGVKIIKELAAVCDVFVENYVPGKLSAMGLGYEDIDKIAPHIIY 164
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+G GP R GYD +A+++ GL+HITG +G P + G+A DLATGLYA+GA+M
Sbjct: 165 CSITGYGQTGPISQRAGYDAVASAVSGLMHITGPENGDPVRPGVAMTDLATGLYAYGAIM 224
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
A L+ KYKTGKG IDCNLLS+QV+ L ++ ANYL E KRWGT+H ++VP+Q FKT
Sbjct: 225 AGLIQKYKTGKGLFIDCNLLSSQVACLSHIAANYLIGQKEAKRWGTAHGSIVPYQAFKTK 284
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
+GY+ +G G+++Q+ +CK+++L L D +Y T L
Sbjct: 285 DGYIVVGAGNNQQFATVCKILDLPELIDDSKYKTNHL 321
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 80/133 (60%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK+++L L D +Y T LRV NR+ L K + + E+ T +WL +F+G PY +N
Sbjct: 301 VCKILDLPELIDDSKYKTNHLRVHNRKELIKILSERFEEELTSKWLHLFEGSGVPYGPIN 360
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ VFA+ + LV E+ H G I + GPAV YS + PPP LG+HT ++LK
Sbjct: 361 NMKNVFAEPQVLHNGLVMEMEHPTVGKISVPGPAVRYSKFRMSEARPPPLLGQHTTHILK 420
Query: 121 DLLNYDETTIAKL 133
++L Y+++ I +L
Sbjct: 421 EVLRYNDSAIREL 433
>gi|440912344|gb|ELR61921.1| hypothetical protein M91_08634, partial [Bos grunniens mutus]
Length = 412
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 156/286 (54%), Positives = 207/286 (72%), Gaps = 2/286 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL V+ILDLTR++AGPF TM L DLGAEVIKVE+P GD+ R WGPPF+ TE STYF
Sbjct: 44 PLEGVKILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRTWGPPFVG-TE-STYFL 101
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNKKS+ V+ K P+G +I+K+LA CDV VEN+VPGKL + LGY+ + +I ++Y
Sbjct: 102 SVNRNKKSIAVNIKDPKGVKIVKELAAVCDVFVENYVPGKLSAMGLGYEDIDKIAPHIVY 161
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+G GP R GYD +A+++ GL+HITG DG P + G+A DLATGLYA+GA+M
Sbjct: 162 CSITGYGQTGPLSQRAGYDAVASAVSGLMHITGPEDGDPVRPGVAMTDLATGLYAYGAIM 221
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
L+ +YKTGKG IDCNLLS+QV+ L V ANYL E +RWGT+H ++VP+Q FKT
Sbjct: 222 TGLIQRYKTGKGLFIDCNLLSSQVACLTQVAANYLIGQKEAQRWGTAHGSIVPYQAFKTK 281
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
+GY+ +G G+++Q+ +CK++NL L D +Y T L + LI
Sbjct: 282 DGYLVVGAGNNQQFAAVCKILNLPELINDSKYRTNHLRVQNRKELI 327
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 49/82 (59%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK++NL L D +Y T LRV+NR+ L K + + E+ T +WL +F+G PY +N
Sbjct: 298 VCKILNLPELINDSKYRTNHLRVQNRKELIKILSTRFKEEMTSKWLQLFEGSGVPYGPIN 357
Query: 61 SISQVFADEHIQDIKLVKEISH 82
++ VFA+ + +K + + H
Sbjct: 358 NMRNVFAEPQVCFLKFLVCLPH 379
>gi|397474565|ref|XP_003808746.1| PREDICTED: caiB/baiF CoA-transferase family protein C7orf10 homolog
isoform 3 [Pan paniscus]
Length = 419
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 157/286 (54%), Positives = 209/286 (73%), Gaps = 2/286 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL V+ILDLTR++AGPF TM L DLGAEVIKVE+P GD+ R WGPPF+ TE STY+
Sbjct: 21 PLEGVKILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRTWGPPFVG-TE-STYYL 78
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNKKS+ V+ K P+G +IIK+LA CDV VEN+VPGKL + LGY+ + EI +IY
Sbjct: 79 SVNRNKKSIAVNIKDPKGVKIIKELAAVCDVFVENYVPGKLSAMGLGYEDIDEIAPHIIY 138
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+G GP R GYD +A+++ GL+HITG +G P + G+A DLATGLYA+GA+M
Sbjct: 139 CSITGYGQTGPISQRAGYDAVASAVSGLMHITGPENGDPVRPGVAMTDLATGLYAYGAIM 198
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
A L+ KYKTGKG IDCNLLS+QV+ L ++ ANYL E KRWGT+H ++VP+Q FKT
Sbjct: 199 AGLIQKYKTGKGLFIDCNLLSSQVACLSHIAANYLIGQKEAKRWGTAHGSIVPYQAFKTK 258
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
+GY+ +G G+++Q+ +CK+++L L + +Y T L + LI
Sbjct: 259 DGYIVVGAGNNQQFATVCKILDLPELIDNSKYKTNHLRVHNRKELI 304
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 79/133 (59%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK+++L L + +Y T LRV NR+ L K + + E+ T +WL +F+G PY +N
Sbjct: 275 VCKILDLPELIDNSKYKTNHLRVHNRKELIKILSERFEEELTSKWLHLFEGSGVPYGPIN 334
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ VFA+ + L+ E+ H G I + GPAV YS + PPP LG+HT ++LK
Sbjct: 335 NMKNVFAEPQVLHNGLIMEMEHPTVGKISVPGPAVRYSKFKMSEARPPPLLGQHTTHILK 394
Query: 121 DLLNYDETTIAKL 133
++L YD+ I +L
Sbjct: 395 EVLRYDDRAIGEL 407
>gi|300863128|ref|NP_001180242.1| caiB/baiF CoA-transferase family protein C7orf10 isoform 3 [Homo
sapiens]
gi|71152390|sp|Q9HAC7.2|CG010_HUMAN RecName: Full=CaiB/baiF CoA-transferase family protein C7orf10;
AltName: Full=Dermal papilla-derived protein 13
gi|68532557|gb|AAH98117.1| C7orf10 protein [Homo sapiens]
gi|68532569|gb|AAH98261.1| C7orf10 protein [Homo sapiens]
gi|194386750|dbj|BAG61185.1| unnamed protein product [Homo sapiens]
Length = 445
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 155/277 (55%), Positives = 206/277 (74%), Gaps = 2/277 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL V+ILDLTR++AGPF TM L DLGAEVIKVE+P GD+ R WGPPF+ TE STY+
Sbjct: 47 PLEGVKILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRTWGPPFVG-TE-STYYL 104
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNKKS+ V+ K P+G +IIK+LA CDV VEN+VPGKL + LGY+ + EI +IY
Sbjct: 105 SVNRNKKSIAVNIKDPKGVKIIKELAAVCDVFVENYVPGKLSAMGLGYEDIDEIAPHIIY 164
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+G GP R GYD +A+++ GL+HITG +G P + G+A DLATGLYA+GA+M
Sbjct: 165 CSITGYGQTGPISQRAGYDAVASAVSGLMHITGPENGDPVRPGVAMTDLATGLYAYGAIM 224
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
A L+ KYKTGKG IDCNLLS+QV+ L ++ ANYL E KRWGT+H ++VP+Q FKT
Sbjct: 225 AGLIQKYKTGKGLFIDCNLLSSQVACLSHIAANYLIGQKEAKRWGTAHGSIVPYQAFKTK 284
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
+GY+ +G G+++Q+ +CK+++L L + +Y T L
Sbjct: 285 DGYIVVGAGNNQQFATVCKILDLPELIDNSKYKTNHL 321
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 79/133 (59%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK+++L L + +Y T LRV NR+ L K + + E+ T +WL +F+G PY +N
Sbjct: 301 VCKILDLPELIDNSKYKTNHLRVHNRKELIKILSERFEEELTSKWLYLFEGSGVPYGPIN 360
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ VFA+ + LV E+ H G I + GPAV YS + PPP LG+HT ++LK
Sbjct: 361 NMKNVFAEPQVLHNGLVMEMEHPTVGKISVPGPAVRYSKFKMSEARPPPLLGQHTTHILK 420
Query: 121 DLLNYDETTIAKL 133
++L YD+ I +L
Sbjct: 421 EVLRYDDRAIGEL 433
>gi|332865031|ref|XP_003318434.1| PREDICTED: caiB/baiF CoA-transferase family protein C7orf10 homolog
isoform 1 [Pan troglodytes]
gi|397474561|ref|XP_003808744.1| PREDICTED: caiB/baiF CoA-transferase family protein C7orf10 homolog
isoform 1 [Pan paniscus]
gi|410218342|gb|JAA06390.1| chromosome 7 open reading frame 10 [Pan troglodytes]
Length = 445
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 155/277 (55%), Positives = 206/277 (74%), Gaps = 2/277 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL V+ILDLTR++AGPF TM L DLGAEVIKVE+P GD+ R WGPPF+ TE STY+
Sbjct: 47 PLEGVKILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRTWGPPFVG-TE-STYYL 104
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNKKS+ V+ K P+G +IIK+LA CDV VEN+VPGKL + LGY+ + EI +IY
Sbjct: 105 SVNRNKKSIAVNIKDPKGVKIIKELAAVCDVFVENYVPGKLSAMGLGYEDIDEIAPHIIY 164
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+G GP R GYD +A+++ GL+HITG +G P + G+A DLATGLYA+GA+M
Sbjct: 165 CSITGYGQTGPISQRAGYDAVASAVSGLMHITGPENGDPVRPGVAMTDLATGLYAYGAIM 224
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
A L+ KYKTGKG IDCNLLS+QV+ L ++ ANYL E KRWGT+H ++VP+Q FKT
Sbjct: 225 AGLIQKYKTGKGLFIDCNLLSSQVACLSHIAANYLIGQKEAKRWGTAHGSIVPYQAFKTK 284
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
+GY+ +G G+++Q+ +CK+++L L + +Y T L
Sbjct: 285 DGYIVVGAGNNQQFATVCKILDLPELIDNSKYKTNHL 321
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 79/133 (59%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK+++L L + +Y T LRV NR+ L K + + E+ T +WL +F+G PY +N
Sbjct: 301 VCKILDLPELIDNSKYKTNHLRVHNRKELIKILSERFEEELTSKWLHLFEGSGVPYGPIN 360
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ VFA+ + L+ E+ H G I + GPAV YS + PPP LG+HT ++LK
Sbjct: 361 NMKNVFAEPQVLHNGLIMEMEHPTVGKISVPGPAVRYSKFKMSEARPPPLLGQHTTHILK 420
Query: 121 DLLNYDETTIAKL 133
++L YD+ I +L
Sbjct: 421 EVLRYDDRAIGEL 433
>gi|194382114|dbj|BAG58812.1| unnamed protein product [Homo sapiens]
Length = 438
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 155/277 (55%), Positives = 206/277 (74%), Gaps = 2/277 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL V+ILDLTR++AGPF TM L DLGAEVIKVE+P GD+ R WGPPF+ TE STY+
Sbjct: 40 PLEGVKILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRTWGPPFVG-TE-STYYL 97
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNKKS+ V+ K P+G +IIK+LA CDV VEN+VPGKL + LGY+ + EI +IY
Sbjct: 98 SVNRNKKSIAVNIKDPKGVKIIKELAAVCDVFVENYVPGKLSAMGLGYEDIDEIAPHIIY 157
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+G GP R GYD +A+++ GL+HITG +G P + G+A DLATGLYA+GA+M
Sbjct: 158 CSITGYGQTGPISQRAGYDAVASAVSGLMHITGPENGDPVRPGVAMTDLATGLYAYGAIM 217
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
A L+ KYKTGKG IDCNLLS+QV+ L ++ ANYL E KRWGT+H ++VP+Q FKT
Sbjct: 218 AGLIQKYKTGKGLFIDCNLLSSQVACLSHIAANYLIGQKEAKRWGTAHGSIVPYQAFKTK 277
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
+GY+ +G G+++Q+ +CK+++L L + +Y T L
Sbjct: 278 DGYIVVGAGNNQQFATVCKILDLPELIDNSKYKTNHL 314
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 79/133 (59%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK+++L L + +Y T LRV NR+ L K + + E+ T +WL +F+G PY +N
Sbjct: 294 VCKILDLPELIDNSKYKTNHLRVHNRKELIKILSERFEEELTSKWLYLFEGSGVPYGPIN 353
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ VFA+ + LV E+ H G I + GPAV YS + PPP LG+HT ++LK
Sbjct: 354 NMKNVFAEPQVLHNGLVMEMEHPTVGKISVPGPAVRYSKFKMSEARPPPLLGQHTTHILK 413
Query: 121 DLLNYDETTIAKL 133
++L YD+ I +L
Sbjct: 414 EVLRYDDRAIGEL 426
>gi|300863124|ref|NP_001180240.1| caiB/baiF CoA-transferase family protein C7orf10 isoform 1 [Homo
sapiens]
gi|68532449|gb|AAH98318.1| C7orf10 protein [Homo sapiens]
Length = 471
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 155/277 (55%), Positives = 206/277 (74%), Gaps = 2/277 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL V+ILDLTR++AGPF TM L DLGAEVIKVE+P GD+ R WGPPF+ TE STY+
Sbjct: 47 PLEGVKILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRTWGPPFVG-TE-STYYL 104
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNKKS+ V+ K P+G +IIK+LA CDV VEN+VPGKL + LGY+ + EI +IY
Sbjct: 105 SVNRNKKSIAVNIKDPKGVKIIKELAAVCDVFVENYVPGKLSAMGLGYEDIDEIAPHIIY 164
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+G GP R GYD +A+++ GL+HITG +G P + G+A DLATGLYA+GA+M
Sbjct: 165 CSITGYGQTGPISQRAGYDAVASAVSGLMHITGPENGDPVRPGVAMTDLATGLYAYGAIM 224
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
A L+ KYKTGKG IDCNLLS+QV+ L ++ ANYL E KRWGT+H ++VP+Q FKT
Sbjct: 225 AGLIQKYKTGKGLFIDCNLLSSQVACLSHIAANYLIGQKEAKRWGTAHGSIVPYQAFKTK 284
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
+GY+ +G G+++Q+ +CK+++L L + +Y T L
Sbjct: 285 DGYIVVGAGNNQQFATVCKILDLPELIDNSKYKTNHL 321
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 81/159 (50%), Gaps = 26/159 (16%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK+++L L + +Y T LRV NR+ L K + + E+ T +WL +F+G PY +N
Sbjct: 301 VCKILDLPELIDNSKYKTNHLRVHNRKELIKILSERFEEELTSKWLYLFEGSGVPYGPIN 360
Query: 61 SISQVFADE--------------------HIQDIK------LVKEISHEKYGDIKIVGPA 94
++ VFA+ H+Q LV E+ H G I + GPA
Sbjct: 361 NMKNVFAEPQNAVSGFQSLLHSLAHGPFLHLQGSARVLHNGLVMEMEHPTVGKISVPGPA 420
Query: 95 VAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETTIAKL 133
V YS + PPP LG+HT ++LK++L YD+ I +L
Sbjct: 421 VRYSKFKMSEARPPPLLGQHTTHILKEVLRYDDRAIGEL 459
>gi|19909529|dbj|BAB87807.1| DERP13 (dermal papilla derived protein 13) [Homo sapiens]
Length = 404
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 153/277 (55%), Positives = 204/277 (73%), Gaps = 2/277 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL V+ILDLTR++AGPF TM L DLGAEVIKVE+P GD+ R WGPPF+ STY+
Sbjct: 6 PLEGVKILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRTWGPPFVGTG--STYYL 63
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNKKS+ V+ K P+G +IIK+LA CDV VEN+VPGKL + LGY+ + EI +IY
Sbjct: 64 SVNRNKKSIAVNIKDPKGVKIIKELAAVCDVFVENYVPGKLSAMGLGYEDIDEIAPHIIY 123
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+G GP R GYD +A+++ GL+HITG +G P + G+A DLATGLYA+GA+M
Sbjct: 124 CSITGYGQTGPISQRAGYDAVASAVSGLMHITGPENGDPVRPGVAMTDLATGLYAYGAIM 183
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
A L+ KYKTGKG IDCNLLS+QV+ L ++ ANYL E KRWGT+H ++VP+Q FKT
Sbjct: 184 AGLIQKYKTGKGLFIDCNLLSSQVACLSHIAANYLIGQKEAKRWGTAHGSIVPYQAFKTK 243
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
+GY+ +G G+++Q+ +CK+++L L + +Y T L
Sbjct: 244 DGYIVVGAGNNQQFATVCKILDLPELIDNSKYKTNHL 280
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 79/133 (59%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK+++L L + +Y T LRV NR+ L K + + E+ T +WL +F+G PY +N
Sbjct: 260 VCKILDLPELIDNSKYKTNHLRVHNRKELIKILSERFEEELTSKWLYLFEGSGVPYGPIN 319
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ VFA+ + LV E+ H G I + GPAV YS + PPP LG+HT ++LK
Sbjct: 320 NMKNVFAEPQVLHNGLVMEMEHPTVGKISVPGPAVRYSKFKMSEARPPPLLGQHTTHILK 379
Query: 121 DLLNYDETTIAKL 133
++L YD+ I +L
Sbjct: 380 EVLRYDDRAIGEL 392
>gi|390466506|ref|XP_002751398.2| PREDICTED: caiB/baiF CoA-transferase family protein C7orf10 isoform
1 [Callithrix jacchus]
Length = 438
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 153/286 (53%), Positives = 207/286 (72%), Gaps = 2/286 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL V+ILDLTR++AGPF TM L DLGAEVIKVE+P GD+ R WGPPF+ STY+
Sbjct: 40 PLEGVKILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRTWGPPFVGTE--STYYL 97
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNKKS+ V+ K P+G +IIK+LA CDV VEN++PGKL + LGY+ + +I +IY
Sbjct: 98 SVNRNKKSIAVNIKDPKGAKIIKELAAVCDVFVENYLPGKLSAMGLGYQDIDKIAPHIIY 157
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+G GP R GYD +A+++ GL+HITG DG P + G+A DLATGLYA+GA+M
Sbjct: 158 CSITGYGQTGPISQRAGYDAVASAVSGLMHITGPEDGEPVRPGVAMTDLATGLYAYGAIM 217
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
A L+ KY+TGKG IDCNLLS+QV+ L ++ ANYL E KRWGT+H ++VP+Q FKT
Sbjct: 218 AGLIQKYRTGKGLFIDCNLLSSQVACLSHIAANYLIGQKEAKRWGTAHGSIVPYQAFKTK 277
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
+G++ +G G+++Q+ +CK+++L L D +Y T L + LI
Sbjct: 278 DGHLVVGAGNNQQFATVCKILDLPELIDDSKYKTNHLRVQNRKELI 323
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 80/133 (60%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK+++L L D +Y T LRV+NR+ L K + + E+ T +WL +F+G PY +N
Sbjct: 294 VCKILDLPELIDDSKYKTNHLRVQNRKELIKILSERFEEELTSKWLRLFEGSGVPYGPIN 353
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ VFA+ + LV E+ H G I I GPAV YS + PPP LG+HT ++LK
Sbjct: 354 NMKNVFAEPQVLHNGLVMEMEHPTVGKISIPGPAVRYSKFKMSEARPPPLLGQHTTHILK 413
Query: 121 DLLNYDETTIAKL 133
++L YD+ I +L
Sbjct: 414 EVLRYDDRAIEEL 426
>gi|297680590|ref|XP_002818071.1| PREDICTED: caiB/baiF CoA-transferase family protein C7orf10 homolog
isoform 1 [Pongo abelii]
Length = 442
Score = 333 bits (855), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 154/277 (55%), Positives = 206/277 (74%), Gaps = 2/277 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL V+ILDLTR++AGPF TM L DLGAEVIKVE+P GD+ R WGPPF+ TE STY+
Sbjct: 44 PLEGVKILDLTRVLAGPFATMNLGDLGAEVIKVERPGVGDDTRTWGPPFVG-TE-STYYL 101
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNKKS+ V+ K P+G +II++LA CDV VEN+VPGKL + LGY+ + +I +IY
Sbjct: 102 SVNRNKKSIAVNIKDPKGVKIIRELAAVCDVFVENYVPGKLSAMGLGYEDIDKIAPHIIY 161
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+G GP R GYD +A+++ GL+HITG +G P + G+A DLATGLYA+GA+M
Sbjct: 162 CSITGYGQTGPISQRAGYDAVASAVSGLMHITGPENGDPVRPGVAMTDLATGLYAYGAIM 221
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
A L+ KYKTGKG IDCNLLS+QV+ L ++ ANYL E KRWGT+H ++VP+Q FKT
Sbjct: 222 AGLIQKYKTGKGLFIDCNLLSSQVACLSHIAANYLIGQKEAKRWGTAHGSIVPYQAFKTK 281
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
+GY+ +G G+++Q+ +CK+++L L D +Y T L
Sbjct: 282 DGYIVVGAGNNQQFATVCKILDLPELIDDSKYKTNHL 318
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 79/133 (59%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK+++L L D +Y T LRV NR+ L K + + E+ T +WL +F+G PY +N
Sbjct: 298 VCKILDLPELIDDSKYKTNHLRVHNRKELIKILSERFEEELTSKWLHLFEGSGVPYGPIN 357
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ VFA+ + LV E+ H G I + GPAV YS + PPP LG+HT ++LK
Sbjct: 358 NMKNVFAEPQVLHNGLVMEMEHPTVGKISVPGPAVRYSKFKMSEARPPPLLGQHTMHILK 417
Query: 121 DLLNYDETTIAKL 133
++L YD+ I +L
Sbjct: 418 EVLRYDDRAIGEL 430
>gi|452825743|gb|EME32738.1| CoA-transferase family protein [Galdieria sulphuraria]
Length = 439
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 155/308 (50%), Positives = 216/308 (70%), Gaps = 13/308 (4%)
Query: 196 SLYENFYSLDLAL------------SSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGA 243
SL++ + + LAL S+++ PL VR+LDL+R++AGPFCTM L DLGA
Sbjct: 12 SLHKTSFRIHLALFPNRNHIFIRNCSNQSQDGPLKGVRVLDLSRVLAGPFCTMQLGDLGA 71
Query: 244 EVIKVEQPVTGDECRKWGPPFLNNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQ 303
EVIK+E+P TGD+ R WGPPF E S Y CVNRNK+SV +DF P G ++IK LA Q
Sbjct: 72 EVIKIERPKTGDDTRSWGPPFAPGGE-SAYLLCVNRNKRSVAIDFSKPSGAELIKKLAAQ 130
Query: 304 CDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGL 363
DVLVENF+PGKL + LGY+ L +IN +LIYCS+TGFG GPY R GYD+I ++IGGL
Sbjct: 131 SDVLVENFLPGKLAQYGLGYEDLQKINPRLIYCSLTGFGQTGPYAQRAGYDVIVSAIGGL 190
Query: 364 LHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLI 423
+ ITG +G PCKVG+A DLATG++A ++++ALL + + G GQ ++ +LL QV++L
Sbjct: 191 MGITGPENGEPCKVGVAITDLATGMFACTSIVSALLARERIGIGQHVETSLLEAQVALLA 250
Query: 424 NVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLAL 483
N+ +NYL G GKRWGT+H ++VP+Q F+T +GY+ IG ++ Q+Q +CK + L++L
Sbjct: 251 NIASNYLIGGKTGKRWGTAHESIVPYQGFRTKDGYLIIGALNNSQFQTLCKTLGLENLIR 310
Query: 484 DPRYLTGA 491
D ++ A
Sbjct: 311 DDKFAKNA 318
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 80/127 (62%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK + L++L D ++ A RVENR+ L + ++ +KTT+EWL GV+ PY +N
Sbjct: 299 LCKTLGLENLIRDDKFAKNAKRVENRQQLIEILQETFQKKTTDEWLKELDGVNLPYGPIN 358
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I QVF D + +++++I H GDI++ G A YS T+P +R PPP LG+HT VLK
Sbjct: 359 TIDQVFRDPQVIHREMIQQIHHPSAGDIRLTGFAAKYSRTKPSIRLPPPLLGQHTQEVLK 418
Query: 121 DLLNYDE 127
+ L +E
Sbjct: 419 NWLTIEE 425
>gi|332028256|gb|EGI68303.1| CaiB/baiF CoA-transferase family protein C7orf10-like protein
[Acromyrmex echinatior]
Length = 435
Score = 330 bits (847), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 145/252 (57%), Positives = 196/252 (77%), Gaps = 2/252 (0%)
Query: 236 MLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTCVNRNKKSVCVDFKTPEGQQ 295
M+L DLGAE++K+E+P GDE RKWGPPF T+ STYF VNRNKKSVC+D K +G+
Sbjct: 1 MILGDLGAEILKIERPDGGDEARKWGPPFFQGTQESTYFMSVNRNKKSVCIDLK--KGKD 58
Query: 296 IIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDI 355
II +LA+ DVL+EN+VPGKL + LGY+ +++I +LIYCS+TG+GS GPY +RPGYD+
Sbjct: 59 IIYELAQTSDVLIENYVPGKLSSMGLGYEDMAKITPRLIYCSLTGYGSSGPYANRPGYDV 118
Query: 356 IAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLL 415
+AAS+GGLLHITG DGPPCKVG+A D+ATGLYAHGA+MA+LL + KT KGQ I CNLL
Sbjct: 119 VAASLGGLLHITGPKDGPPCKVGVAMTDMATGLYAHGAIMASLLQRSKTNKGQWIQCNLL 178
Query: 416 STQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKV 475
STQ++ LIN+ +NYLN E RWG+ H ++VP++ F T +GY+TIG GS++Q+ ++
Sbjct: 179 STQIASLINIASNYLNGNKEATRWGSEHESIVPYEAFSTKDGYMTIGVGSNEQFLELVTK 238
Query: 476 MNLQHLALDPRY 487
+ + LA + ++
Sbjct: 239 LQMSELAANDKF 250
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 60/105 (57%), Gaps = 4/105 (3%)
Query: 5 MNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQ 64
+ + LA + ++ RV+NR L + + +KT +EW F G SFP+ +N++ +
Sbjct: 239 LQMSELAANDKFKNNIARVKNRTELLEILRDVIKKKTNQEWSAEFTGASFPFGAINTMRE 298
Query: 65 VFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQ----PEVR 105
VF D H++ IKLV+E++H G +K+VGP V YS P VR
Sbjct: 299 VFDDPHVKHIKLVQEVNHPVTGKVKLVGPPVTYSYATNIDVPTVR 343
>gi|307204111|gb|EFN82980.1| Uncharacterized protein C7orf10-like protein [Harpegnathos
saltator]
Length = 394
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 146/252 (57%), Positives = 196/252 (77%), Gaps = 2/252 (0%)
Query: 236 MLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTCVNRNKKSVCVDFKTPEGQQ 295
M+L DLGAE++K+E+P +GDE R+WGPPF T STYF VNRNKKSVC+D K +G+
Sbjct: 1 MILGDLGAEILKIERPGSGDEARRWGPPFFEGTRESTYFASVNRNKKSVCIDLK--KGRD 58
Query: 296 IIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDI 355
II +LA++CDVLVEN+VPGKL+ + LGY ++++ L+YCS+TG+GS+GPY R GYD+
Sbjct: 59 IIYELARECDVLVENYVPGKLNSIGLGYDDIAKVAPCLVYCSLTGYGSQGPYASRSGYDV 118
Query: 356 IAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLL 415
IAAS+GGLLHITG DGPPCKVG+A D+ATGLYAHGA+MAALL + KT +GQ I CNLL
Sbjct: 119 IAASLGGLLHITGPKDGPPCKVGVAMTDMATGLYAHGAIMAALLQRSKTNRGQWIQCNLL 178
Query: 416 STQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKV 475
STQ++ +IN+ +NYLN G + R G+ H ++VP++ F T NGY+TIG GSD Q+ ++ +
Sbjct: 179 STQIASMINIASNYLNGGKDATRLGSEHESIVPYEAFATKNGYMTIGAGSDLQFIELVQR 238
Query: 476 MNLQHLALDPRY 487
+ L LA D ++
Sbjct: 239 LQLSELASDNKF 250
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+ + + L LA D ++ RV++R L + + + T +EW +IF+G SFPY VN
Sbjct: 235 LVQRLQLSELASDNKFKNNTARVKHRIELLQILRDMFKKNTNQEWSVIFEGASFPYGTVN 294
Query: 61 SISQ 64
+I +
Sbjct: 295 TIKE 298
>gi|427779249|gb|JAA55076.1| Putative l-carnitine dehydratase/alpha-methylacyl-coa racemase
[Rhipicephalus pulchellus]
Length = 370
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 150/252 (59%), Positives = 191/252 (75%), Gaps = 2/252 (0%)
Query: 236 MLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTCVNRNKKSVCVDFKTPEGQQ 295
M+L DLGAE+IK+E+P GDE R WGPPFL + S YF VNRNKKSV VD K+ EG
Sbjct: 1 MILGDLGAEIIKIERPGVGDETRNWGPPFLGDQ--SCYFLSVNRNKKSVAVDLKSVEGVS 58
Query: 296 IIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDI 355
+IK +A DVL+EN++PGKLD L LGY+ + I Q+IYCS+TG+G GPY+DR GYD+
Sbjct: 59 LIKKIAGTSDVLLENYLPGKLDSLGLGYEDIRAIAPQIIYCSITGYGQNGPYRDRAGYDV 118
Query: 356 IAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLL 415
IAAS+GGLLHITG G PCKVG+A DLATGLYAHGAVMAALL + +TGKGQ I+CNL
Sbjct: 119 IAASMGGLLHITGPRGGEPCKVGVAITDLATGLYAHGAVMAALLQRNRTGKGQWINCNLF 178
Query: 416 STQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKV 475
STQVS+L N+ +NYLNA +E R GTSH ++VP+ F+T +GY+T+G S+ Q++ C V
Sbjct: 179 STQVSVLANIASNYLNANLEASRHGTSHESIVPYAAFETLDGYITVGAASEGQFKVFCTV 238
Query: 476 MNLQHLALDPRY 487
+++ L DPR+
Sbjct: 239 LDVNELLSDPRF 250
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 85/139 (61%), Gaps = 4/139 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C V+++ L DPR+ RV+NR++L + + + KTT+EWL +F+G P +N
Sbjct: 235 FCTVLDVNELLSDPRFKDNPSRVQNRDVLVEILNKRFKLKTTKEWLQLFEGSGIPXGPIN 294
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I QVF D Q ++V ++ H+ G + +VGPAV +S +VR+ PP LGEHTD VL
Sbjct: 295 TIRQVFEDP--QGKEMVVKVPHKTAGTVSVVGPAVEFSDGVNKVRSAPPLLGEHTDEVLS 352
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ L DE I +L+ KKI+
Sbjct: 353 EYLTADE--IGRLRAKKII 369
>gi|427789845|gb|JAA60374.1| Putative l-carnitine dehydratase/alpha-methylacyl-coa racemase
[Rhipicephalus pulchellus]
Length = 370
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 150/252 (59%), Positives = 191/252 (75%), Gaps = 2/252 (0%)
Query: 236 MLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTCVNRNKKSVCVDFKTPEGQQ 295
M+L DLGAE+IK+E+P GDE R WGPPFL + S YF VNRNKKSV VD K+ EG
Sbjct: 1 MILGDLGAEIIKIERPGVGDETRNWGPPFLGDQ--SCYFLSVNRNKKSVAVDLKSVEGVS 58
Query: 296 IIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDI 355
+IK +A DVL+EN++PGKLD L LGY+ + I Q+IYCS+TG+G GPY+DR GYD+
Sbjct: 59 LIKKIAGTSDVLLENYLPGKLDSLGLGYEDIRAIAPQIIYCSITGYGQNGPYRDRAGYDV 118
Query: 356 IAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLL 415
IAAS+GGLLHITG G PCKVG+A DLATGLYAHGAVMAALL + +TGKGQ I+CNL
Sbjct: 119 IAASMGGLLHITGPRGGEPCKVGVAITDLATGLYAHGAVMAALLQRNRTGKGQWINCNLF 178
Query: 416 STQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKV 475
STQVS+L N+ +NYLNA +E R GTSH ++VP+ F+T +GY+T+G S+ Q++ C V
Sbjct: 179 STQVSVLANIASNYLNANLEASRHGTSHESIVPYAAFETLDGYITVGAASEGQFKVFCTV 238
Query: 476 MNLQHLALDPRY 487
+++ L DPR+
Sbjct: 239 LDVNELLSDPRF 250
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 86/139 (61%), Gaps = 4/139 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C V+++ L DPR+ RV+NR++L + + + KTT+EWL +F+G PY +N
Sbjct: 235 FCTVLDVNELLSDPRFKDNPSRVQNRDVLVEILNKRFKLKTTKEWLQLFEGSGIPYGPIN 294
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I QVF D Q ++V ++ H+ G + +VGPAV +S +VR+ PP LGEHTD VL
Sbjct: 295 TIRQVFEDP--QGKEMVVKVPHKTAGTVSVVGPAVEFSDGVNKVRSAPPLLGEHTDEVLS 352
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ L DE I +L+ KKI+
Sbjct: 353 EYLTADE--IGRLRAKKII 369
>gi|269929202|ref|YP_003321523.1| Formyl-CoA transferase [Sphaerobacter thermophilus DSM 20745]
gi|269788559|gb|ACZ40701.1| Formyl-CoA transferase [Sphaerobacter thermophilus DSM 20745]
Length = 396
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 147/286 (51%), Positives = 207/286 (72%), Gaps = 2/286 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL +R+LDL+R++AGP+CTM+L DLGAEVIKVEQP GD+ R WGPP++ S Y+
Sbjct: 4 PLDGIRVLDLSRVLAGPYCTMMLGDLGAEVIKVEQPGRGDDTRHWGPPWVGGE--SAYYM 61
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
NRNKK + V+ K G++II++LA+Q DV+VENF G LDR+ LGY+ LS +N L++
Sbjct: 62 ACNRNKKGITVNLKDERGKEIIRELARQSDVVVENFKVGALDRMGLGYEALSALNPGLVW 121
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+G GPY DR GYD+IA GG++ +TG PDG P KVGIA +D+ TG++A A++
Sbjct: 122 CSITGYGQDGPYADRAGYDVIAQGEGGIMSVTGEPDGEPMKVGIAIVDITTGMFACNAIL 181
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
AAL + +TGKGQKID LL++ V+ L NVG+ YL G KR+G +HAN+VP+Q FK
Sbjct: 182 AALRVRDQTGKGQKIDMALLASAVAWLANVGSAYLVTGELPKRYGNAHANLVPYQTFKAR 241
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
+ ++T+G G+D+Q+Q +C+++ L+HLA D R+ T +A LI
Sbjct: 242 DRWMTVGVGNDRQFQILCRILGLEHLATDERFATNPARVANRDELI 287
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 79/139 (56%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+++ L+HLA D R+ T RV NR+ L ++ + ++WL P +N
Sbjct: 258 LCRILGLEHLATDERFATNPARVANRDELIPILQEAFATRDADDWLEELSAAGIPCGPIN 317
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ +VFA IQ K+V E+ H G +++ GP +S T VR+ PP LGEHTD VL+
Sbjct: 318 TVDRVFAHPQIQHRKMVVEVPHPTIGTLRMAGPPYIFSETPATVRSHPPLLGEHTDLVLR 377
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ L Y + IA+L+ + ++
Sbjct: 378 ERLGYSDEQIAQLRAEGVV 396
>gi|324517058|gb|ADY46714.1| CaiB/baiF CoA-transferase family protein, partial [Ascaris suum]
Length = 404
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 148/279 (53%), Positives = 198/279 (70%), Gaps = 2/279 (0%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTY 273
S PLSNVRILD +RI++ PF +M+L DLGAE+ K+E+P GDE R W P + + + S Y
Sbjct: 4 SSPLSNVRILDFSRIVSAPFASMILGDLGAEIWKIERPGRGDEVRSWAPSWTASGQ-SCY 62
Query: 274 FTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQL 333
+ +NRNKKS+ ++ K +GQQ+ + LA +CDVL+ENF PG + L Y+ LS N +L
Sbjct: 63 YVSLNRNKKSIALNLKHSKGQQLARQLASKCDVLIENFRPGTMKEFGLDYETLSTENKKL 122
Query: 334 IYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGA 393
IYCS+TG+G GPY R YDI +IGG + +TG DG PC G I + TGLYAHGA
Sbjct: 123 IYCSITGYGPDGPYATRAAYDINVEAIGGFMDVTGPNDGQPCMAGSDVIAMITGLYAHGA 182
Query: 394 VMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFK 453
++AALL + TGKGQKIDCNLLSTQ++ L+NVG+NYLNAG+EG+RWGT H +VVP+Q FK
Sbjct: 183 ILAALLQRTTTGKGQKIDCNLLSTQIAALMNVGSNYLNAGVEGRRWGTQHESVVPYQAFK 242
Query: 454 TSNG-YVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
T +G Y T+G +D+Q++ +CK++ L L Y T A
Sbjct: 243 TKDGRYFTVGAANDEQFKKLCKLIGLPKLPNKEEYATNA 281
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 81/143 (56%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK++ L L Y T A RV+NRE L + I + +++ + W F S P VN
Sbjct: 262 LCKLIGLPKLPNKEEYATNANRVKNRESLIEAISKRFLKRDLKYWESTFNDPSLPCGPVN 321
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++++ FA ++ + +V+E+ H + G IK+ GPAV YS +R+PPP LGEHT VL
Sbjct: 322 TVAEAFAHPQVRHLGIVQELYHPQTGAIKVTGPAVQYSEAANRIRSPPPMLGEHTKEVLS 381
Query: 121 DLLNYDETTIAKLKEKKILGLIE 143
++LN E + LKE K + E
Sbjct: 382 NVLNISEEELKHLKENKAIDFAE 404
>gi|393243403|gb|EJD50918.1| CAIB/BAIF family enzyme [Auricularia delicata TFB-10046 SS5]
Length = 432
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 155/298 (52%), Positives = 201/298 (67%), Gaps = 12/298 (4%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE------ 269
PL +RILDLTR++AGP TMLLADLGA+VIKVE+P GD+ R W PP E
Sbjct: 27 PLKGIRILDLTRVLAGPTATMLLADLGADVIKVEEPTRGDDTRSWAPPSAPLLEDAPKEA 86
Query: 270 -----LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYK 324
S YF VNRNK+S+ +D K P G I + LA++ DVL+ENF+ GKLD++ LGY
Sbjct: 87 SHLPPESAYFLAVNRNKRSLTLDLKQPAGLNIARQLAQRADVLIENFMVGKLDKMGLGYD 146
Query: 325 HLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDL 384
L E N LIY S+TG+G GPY + GYD+I GL+HITG PDGPPCKVG+A+ D+
Sbjct: 147 ALRESNDGLIYVSITGYGQTGPYANAAGYDVIIEGEAGLMHITGEPDGPPCKVGVAATDV 206
Query: 385 ATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHA 444
ATGLYAHGAV+AAL + KTGKG IDCNL +Q++ L N+ +NYL AG E R GTSH
Sbjct: 207 ATGLYAHGAVLAALFARQKTGKGCYIDCNLFESQIAGLANIASNYLIAGAEAGRHGTSHP 266
Query: 445 NVVPHQVFKTSNGYVTIGTGSDKQYQDMCK-VMNLQHLALDPRYLTGALILAMTSHLI 501
++VP+QVF +G++ IG G++KQ+ + +M L LDPR+ T A +A + L+
Sbjct: 267 SIVPYQVFPCKDGFIMIGAGNNKQFATFAEHIMGDASLGLDPRFSTNAARVANRATLV 324
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 85/138 (61%), Gaps = 5/138 (3%)
Query: 4 VMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSIS 63
+M L LDPR+ T A RV NR L K IE + E + WL F+G+ PY +N+I
Sbjct: 298 IMGDASLGLDPRFSTNAARVANRATLVKMIEDRMREHGRDYWLDKFRGLGIPYGPINNIK 357
Query: 64 QVFADEHIQDIK--LVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
Q F EH Q + +V+EI H + G IK+VGPAV+Y + + PPP L +HTD +L++
Sbjct: 358 QTF--EHPQAVARGVVQEIEHPRAGKIKLVGPAVSYDGRKMPIERPPPWLSQHTDEILRE 415
Query: 122 LLNYDETTIAKLKEKKIL 139
L YD+ IA+L+E+K++
Sbjct: 416 -LGYDDGEIAELREQKVV 432
>gi|348539504|ref|XP_003457229.1| PREDICTED: caiB/baiF CoA-transferase family protein C7orf10-like
[Oreochromis niloticus]
Length = 440
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 147/257 (57%), Positives = 192/257 (74%), Gaps = 2/257 (0%)
Query: 236 MLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTCVNRNKKSVCVDFKTPEGQQ 295
M+L DLGA+VIKVE+P GD+ R WGPPF+ + STYF VNRNKKS+ VD K P G Q
Sbjct: 1 MILGDLGAQVIKVERPGAGDDTRAWGPPFVASE--STYFLSVNRNKKSIAVDLKHPRGAQ 58
Query: 296 IIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDI 355
I++ LA CDVL+EN+VPGKL + LGY+ LS +N +LIYCS+TG+G GP+ PGYD
Sbjct: 59 IVQQLAGVCDVLLENYVPGKLRHMGLGYEQLSGLNPRLIYCSITGYGQTGPHAQSPGYDS 118
Query: 356 IAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLL 415
IA+++ G++HITG G P + G+A DLATGLYAHGAVMAALL + KTG+G IDCNLL
Sbjct: 119 IASAVSGMMHITGPEGGDPVRPGVAMTDLATGLYAHGAVMAALLQRQKTGRGVHIDCNLL 178
Query: 416 STQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKV 475
S+QVS L ++ ANYLNAG E +RWGT+H ++VP+Q FKT +G++ + G++KQ+ +C+V
Sbjct: 179 SSQVSCLSHIAANYLNAGKEARRWGTAHESIVPYQGFKTKDGHIVVAAGNEKQFVRVCQV 238
Query: 476 MNLQHLALDPRYLTGAL 492
M L L DP+Y T L
Sbjct: 239 MELMELTEDPKYKTNKL 255
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+VM L L DP+Y T LRVENR+ L + +++TT +WL F+G P +N
Sbjct: 235 VCQVMELMELTEDPKYKTNKLRVENRKQLLHTL---FLQETTADWLKKFKGSGVPIGPIN 291
Query: 61 SISQVFAD 68
SI +VF++
Sbjct: 292 SIQEVFSE 299
>gi|301607736|ref|XP_002933453.1| PREDICTED: caiB/baiF CoA-transferase family protein C7orf10-like
[Xenopus (Silurana) tropicalis]
Length = 379
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 144/257 (56%), Positives = 191/257 (74%), Gaps = 2/257 (0%)
Query: 236 MLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTCVNRNKKSVCVDFKTPEGQQ 295
M+LADLGAEVIKVE+P +GD+ R WGPPF+ + S YF VNRNKKS+ V+ K P G +
Sbjct: 1 MILADLGAEVIKVERPGSGDDTRSWGPPFVGSE--SAYFLSVNRNKKSIAVNMKNPNGSK 58
Query: 296 IIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDI 355
II++LAK CDV VEN++PGKL ++ LG++ + EI +IYCS+TG+G GP R GYD
Sbjct: 59 IIQELAKACDVFVENYIPGKLSKMGLGFEEIKEIAPHIIYCSITGYGQTGPLFQRAGYDA 118
Query: 356 IAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLL 415
+A ++ GL++ITG DG P + G+A DLATGLYAHGA+MA LL + KTGKG IDCNLL
Sbjct: 119 VACAMSGLMYITGPEDGDPVRPGVAMTDLATGLYAHGAIMAGLLQRSKTGKGMHIDCNLL 178
Query: 416 STQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKV 475
S+QV+ L +V AN+LN G E KRWGT+H ++VP+Q FK+ +GY+ IG G+D+Q+ +CK+
Sbjct: 179 SSQVACLSHVAANFLNGGAEAKRWGTAHGSIVPYQSFKSKDGYLVIGAGNDQQFSTVCKI 238
Query: 476 MNLQHLALDPRYLTGAL 492
M L L DPR+ T L
Sbjct: 239 MKLTELIDDPRFKTNKL 255
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 81/139 (58%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK+M L L DPR+ T LRV+ R L + A+ EKTT EWL +F+G PY +N
Sbjct: 235 VCKIMKLTELIDDPRFKTNKLRVQYRNDLLTILSARFSEKTTSEWLNLFEGSGIPYGPIN 294
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI QVF++ + L+ ++ H I + GPAV +S PP +G+HT VLK
Sbjct: 295 SIKQVFSEPQVIHNGLILDMDHPTARKISVPGPAVRFSEFNISNPNSPPLIGQHTTEVLK 354
Query: 121 DLLNYDETTIAKLKEKKIL 139
++L Y++T I KL + +I+
Sbjct: 355 NILGYEDTHINKLIQAEIV 373
>gi|299743633|ref|XP_002910688.1| CAIB/BAIF family enzyme [Coprinopsis cinerea okayama7#130]
gi|298405746|gb|EFI27194.1| CAIB/BAIF family enzyme [Coprinopsis cinerea okayama7#130]
Length = 415
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 154/300 (51%), Positives = 205/300 (68%), Gaps = 12/300 (4%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL--- 270
S PL ++ILD+TR++AGP TMLLADLGA+VIKVE+ GD+ R W PP
Sbjct: 8 SPPLKGIKILDMTRVLAGPTATMLLADLGADVIKVEEVTRGDDTRAWNPPSAPTLPTAPK 67
Query: 271 --------STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLG 322
S YF VNRNK+S+ V+FK PEG +I+ L KQ DVLVENFV GKL + LG
Sbjct: 68 ETSHLPPESAYFLAVNRNKRSITVNFKEPEGLEILHKLVKQSDVLVENFVTGKLASMGLG 127
Query: 323 YKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASI 382
++ E+N +LIY S+TG+G GPYK GYD+I + GL+HITG PDGPPCKVG+A+
Sbjct: 128 WETCHELNPRLIYASITGYGQTGPYKGAAGYDVIVEAEAGLMHITGEPDGPPCKVGVAAT 187
Query: 383 DLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTS 442
D+ATGLYAHGA+MAALL + +TGKG IDCNL TQ++ L N+ +NYL AG E R GT+
Sbjct: 188 DIATGLYAHGAIMAALLSRQQTGKGVWIDCNLFETQIAGLANIASNYLVAGKEASRHGTA 247
Query: 443 HANVVPHQVFKTSNGYVTIGTGSDKQYQDMC-KVMNLQHLALDPRYLTGALILAMTSHLI 501
H ++VP+QVF +G++ IG G++KQ++ + K++ LA DPR+ T +A + L+
Sbjct: 248 HPSIVPYQVFPCRDGFLMIGAGNNKQFKTLAEKILKNPTLATDPRFSTNDARVANRTELV 307
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 80/139 (57%), Gaps = 5/139 (3%)
Query: 3 KVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSI 62
K++ LA DPR+ T RV NR L K I ME+ E WL F+G+ P+ +N+I
Sbjct: 280 KILKNPTLATDPRFSTNDARVANRTELVKIISEALMEEDREHWLQQFKGLGVPFGPINNI 339
Query: 63 SQVFADEHIQDI--KLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
Q F EH Q I ++ E+ H + G +K+V PAVAY+ + VR PPP L EHT V++
Sbjct: 340 QQTF--EHPQAIARQVTVEVEHGRSGKLKLVAPAVAYNGQKMPVRLPPPWLSEHTTEVME 397
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ L Y I++L+ + I+
Sbjct: 398 E-LGYSREEISRLRSRAII 415
>gi|55729068|emb|CAH91271.1| hypothetical protein [Pongo abelii]
Length = 314
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 148/275 (53%), Positives = 200/275 (72%), Gaps = 2/275 (0%)
Query: 227 RIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTCVNRNKKSVCV 286
R++AGPF TM L DLGAEVIKVE+P GD+ R WGPPF+ TE STY+ VNRNKKS+ V
Sbjct: 1 RVLAGPFATMNLGDLGAEVIKVERPGVGDDTRTWGPPFVG-TE-STYYLSVNRNKKSIAV 58
Query: 287 DFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGP 346
+ K P+G +II++LA CDV VEN+VPGKL + LGY+ + +I +IYCS+TG+G GP
Sbjct: 59 NIKDPKGVKIIRELAAVCDVFVENYVPGKLSAMGLGYEDIDKIAPHIIYCSITGYGQTGP 118
Query: 347 YKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGK 406
R GYD +A+++ GL+HITG +G P + G+A DLATGLYA+GA+MA L+ KYKTGK
Sbjct: 119 IPQRAGYDAVASAVSGLMHITGPENGDPVRPGVAMTDLATGLYAYGAIMAGLIQKYKTGK 178
Query: 407 GQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSD 466
G IDCNLLS+QV+ L ++ ANYL E KRWGT+H ++VP+Q FKT +GY+ +G G++
Sbjct: 179 GLFIDCNLLSSQVACLSHIAANYLIGQKEAKRWGTAHGSIVPYQAFKTKDGYIVVGAGNN 238
Query: 467 KQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
+Q+ +CK+++L L D +Y T L + LI
Sbjct: 239 QQFATVCKILDLPELIDDSKYKTNHLRVHNRKELI 273
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK+++L L D +Y T LRV NR+ L K + + E+ T +WL +F+G PY +N
Sbjct: 244 VCKILDLPELIDDSKYKTNHLRVHNRKELIKILSERFEEELTSKWLHLFEGSGVPYGPIN 303
Query: 61 SISQVFADEHI 71
++ VFA+ +
Sbjct: 304 NMKNVFAEPQV 314
>gi|449492302|ref|XP_002196762.2| PREDICTED: caiB/baiF CoA-transferase family protein C7orf10 homolog
[Taeniopygia guttata]
Length = 379
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 148/266 (55%), Positives = 191/266 (71%), Gaps = 2/266 (0%)
Query: 236 MLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTCVNRNKKSVCVDFKTPEGQQ 295
M L DLGAEVIKVE+P GD+ R WGPPFL TE S YF VNRNKKS+ ++ K G +
Sbjct: 1 MNLGDLGAEVIKVERPGAGDDTRAWGPPFLG-TE-SVYFLSVNRNKKSIAINMKDSRGVK 58
Query: 296 IIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDI 355
+IK+LA DV VENFVPGKL + LGY+ + +I ++YCS++G+G GP R GYD
Sbjct: 59 LIKELAAASDVFVENFVPGKLAEMGLGYEDIKKIAPHIVYCSISGYGQTGPVVQRGGYDS 118
Query: 356 IAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLL 415
+AA++ GL+HITGH DG P + G+A DLATGLY +GA+MA LL +YKTGKG IDCNLL
Sbjct: 119 VAAAVSGLMHITGHEDGEPVRSGVAMTDLATGLYTYGAIMAGLLQRYKTGKGLYIDCNLL 178
Query: 416 STQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKV 475
STQV+ L +V ANYLN IEGKRWGT+H ++VP+Q FKT +GY+ +G G+D Q+ +CK+
Sbjct: 179 STQVACLTHVAANYLNCKIEGKRWGTAHGSIVPYQAFKTKDGYIVVGAGNDHQFATVCKI 238
Query: 476 MNLQHLALDPRYLTGALILAMTSHLI 501
+NL ++ D RY T L + LI
Sbjct: 239 LNLPEVSKDSRYKTNTLRVQNRKELI 264
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 78/133 (58%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK++NL ++ D RY T LRV+NR+ L + + EK T EWL +F+G PY +N
Sbjct: 235 VCKILNLPEVSKDSRYKTNTLRVQNRKELIDILSTRFSEKATVEWLQLFEGSGVPYGPIN 294
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ QVF+D + LV E++H G I + GP V YS PPP +G+HT +LK
Sbjct: 295 NMQQVFSDPQVLHNGLVMEMNHPTAGKIAVPGPGVRYSEFAVSHPKPPPLVGQHTVEILK 354
Query: 121 DLLNYDETTIAKL 133
+L Y++ I +L
Sbjct: 355 SVLGYEDDAIEEL 367
>gi|148230414|ref|NP_001089561.1| uncharacterized protein LOC734617 [Xenopus laevis]
gi|66912095|gb|AAH97906.1| MGC115704 protein [Xenopus laevis]
Length = 379
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 140/257 (54%), Positives = 189/257 (73%), Gaps = 2/257 (0%)
Query: 236 MLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTCVNRNKKSVCVDFKTPEGQQ 295
M+L DLGAE+IKVE+P GD+ R WGPPF+ + S YF VNRNKKS+ V+ K P G +
Sbjct: 1 MILVDLGAEIIKVERPGPGDDTRSWGPPFVGSE--SAYFLSVNRNKKSIAVNMKNPNGSK 58
Query: 296 IIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDI 355
II++LAK CDV +EN++PGKL ++ LG++ + EI +IYCS+TG+G GP R GYD
Sbjct: 59 IIQELAKACDVFIENYIPGKLSKMGLGFEEIKEIAPHIIYCSITGYGQTGPLFQRAGYDA 118
Query: 356 IAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLL 415
+A ++ GL++ITG DG P + G+A DLATGL+AHGA+MA LL + KTGKG IDCNLL
Sbjct: 119 VACAMSGLMYITGPEDGDPVRPGVAMTDLATGLFAHGAIMAGLLQRSKTGKGMHIDCNLL 178
Query: 416 STQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKV 475
S+QV+ L +V AN+LN G E KRWGT+H ++VP+Q FK+ +GY+ IG G+D+Q+ +CK+
Sbjct: 179 SSQVACLSHVAANFLNGGAEAKRWGTAHGSIVPYQSFKSKDGYLVIGAGNDQQFSTVCKI 238
Query: 476 MNLQHLALDPRYLTGAL 492
M L L DPR+ T L
Sbjct: 239 MELTELIGDPRFKTNKL 255
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 83/139 (59%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK+M L L DPR+ T LRV+NR L + A+ EKTT EWL + +G PY +N
Sbjct: 235 VCKIMELTELIGDPRFKTNKLRVQNRNDLLTILSARFSEKTTSEWLNLLEGSGIPYGPIN 294
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI QVF++ + LV ++ H G I + GPAV +S PPP +G+HT VLK
Sbjct: 295 SIKQVFSEPQVIHNGLVLDMDHPTAGKISVPGPAVRFSGFNISKPNPPPLIGQHTTEVLK 354
Query: 121 DLLNYDETTIAKLKEKKIL 139
++L Y+++ I +L + +I+
Sbjct: 355 NILGYEDSHINELIKAEIV 373
>gi|395518033|ref|XP_003763172.1| PREDICTED: caiB/baiF CoA-transferase family protein C7orf10-like,
partial [Sarcophilus harrisii]
Length = 333
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 145/245 (59%), Positives = 185/245 (75%), Gaps = 2/245 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL V+ILDLTR++AGPF TM L DLGAEVIKVE+P GD+ R WGPPF+ + STYF
Sbjct: 35 PLDGVKILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRAWGPPFVGSE--STYFL 92
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNKKS+ V+ K P+G QIIK+LA CDV VENFVPGKL ++ LGY+ +SEI ++Y
Sbjct: 93 SVNRNKKSIAVNIKDPKGVQIIKELAAVCDVFVENFVPGKLSKMGLGYEEISEIAPHIVY 152
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+G GP R GYD +A+++ GL+HITG DG P + G+A DLATGLY++GA+M
Sbjct: 153 CSITGYGQTGPMSHRAGYDAVASAVSGLMHITGPEDGEPVRPGVAMTDLATGLYSYGAIM 212
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
A LL +YKTG+G IDCNLLS+QV+ L +V ANYL AG E +RWGT+H ++VP+Q S
Sbjct: 213 AGLLQRYKTGRGLYIDCNLLSSQVACLSHVAANYLIAGKEARRWGTAHGSIVPYQRTLRS 272
Query: 456 NGYVT 460
G V+
Sbjct: 273 PGAVS 277
>gi|269928907|ref|YP_003321228.1| Formyl-CoA transferase [Sphaerobacter thermophilus DSM 20745]
gi|269788264|gb|ACZ40406.1| Formyl-CoA transferase [Sphaerobacter thermophilus DSM 20745]
Length = 395
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 137/278 (49%), Positives = 191/278 (68%), Gaps = 2/278 (0%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTY 273
S P + VR+LDL+RI++GP+CTM+LAD GAEVIKVE+P GD+ R WGPPF+ S Y
Sbjct: 2 SGPFAGVRVLDLSRILSGPYCTMVLADFGAEVIKVERPGAGDDTRHWGPPFVGGE--SGY 59
Query: 274 FTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQL 333
F +NRNKKS+ VD TPEG++II LA+ DV +ENF PG DRL +GY+ L + N +
Sbjct: 60 FLSINRNKKSITVDMSTPEGREIIYRLARTADVAIENFRPGTADRLGIGYERLRQENPSI 119
Query: 334 IYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGA 393
IYCS++GFG GPY+DRPGYD +A ++ G++ ITG PDGPP K G++ D+ G++A A
Sbjct: 120 IYCSISGFGQTGPYRDRPGYDALAQAMSGMMAITGEPDGPPMKHGMSIADIGAGMWAVFA 179
Query: 394 VMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFK 453
+ AAL H+ +TG+GQ ID +LL Q+S L NY +G R+G++H N+VP+Q F
Sbjct: 180 IAAALYHRERTGEGQAIDVSLLDAQLSWLTYAAGNYFASGKNPGRYGSAHPNIVPYQPFA 239
Query: 454 TSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
T++GY+ + G+D+ +Q C+ LA P + T A
Sbjct: 240 TADGYIMLAVGNDRLWQQFCQAAGRPELADQPGFRTNA 277
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 1/139 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+ LA P + T A RV NR + + A ++TT EW+ + + P +N
Sbjct: 258 FCQAAGRPELADQPGFRTNAERVTNRADVVATVGAIMAQRTTAEWMELLERAGVPAGPIN 317
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q+ D H+ ++V + H G++K VG S T VR+ PP LG+HTD VL
Sbjct: 318 TVEQILHDPHVLAREMVVTLQHPTAGEVKTVGIPAKLSDTPGTVRSAPPLLGQHTDEVLA 377
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ L YD IA L+E+ I+
Sbjct: 378 E-LGYDAAAIADLRERGIV 395
>gi|317122581|ref|YP_004102584.1| L-carnitine dehydratase/bile acid-inducible protein F
[Thermaerobacter marianensis DSM 12885]
gi|315592561|gb|ADU51857.1| L-carnitine dehydratase/bile acid-inducible protein F
[Thermaerobacter marianensis DSM 12885]
Length = 399
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 130/279 (46%), Positives = 195/279 (69%), Gaps = 2/279 (0%)
Query: 213 PSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELST 272
P PL +R+LDL+R+++GP+CTM+LAD GA+VIK+E+P TGD+ R WGPPF+N +
Sbjct: 4 PQGPLHGIRVLDLSRVLSGPYCTMMLADFGADVIKIERPETGDDTRAWGPPFVNGE--AA 61
Query: 273 YFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQ 332
YF VNRNK+SV VD K PEG+ +I+ +A+QCDV+VENF PG +L +G L N +
Sbjct: 62 YFLSVNRNKRSVVVDLKAPEGRDLIRRMARQCDVVVENFRPGTAAKLGIGPDDLLRENPR 121
Query: 333 LIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHG 392
L+Y S++GFG GPY+D+PGYD IA ++GG++H+TG PD PP + G+A D+ G++A
Sbjct: 122 LVYASISGFGQDGPYRDKPGYDAIAQAMGGIMHVTGEPDRPPVRAGVAIADIGAGMWAAF 181
Query: 393 AVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVF 452
++AAL + ++G+GQ +D +LL Q++ L V NY G +R+G++H N+VP+Q F
Sbjct: 182 GILAALWERERSGRGQVVDVSLLEGQIAWLTYVAGNYFATGQVPRRYGSAHPNLVPYQAF 241
Query: 453 KTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
+T++G++ + G+D ++ C+ LA DPRY T A
Sbjct: 242 ETADGHLIVAVGNDSLWRRFCEAAERPDLAADPRYATNA 280
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 75/141 (53%), Gaps = 3/141 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+ LA DPRY T A RVE+R L E+EA +TT EWL P +
Sbjct: 261 FCEAAERPDLAADPRYATNAGRVEHRNQLLPELEALMRSRTTAEWLERLDRAGVPAGPIL 320
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI+ + D H+Q +++ + H + G I++ G V S T + PPP LG+HTD VL+
Sbjct: 321 SIADLARDPHVQHRQMIVSLEHPRAGVIRVTGIPVKLSATPGAIYAPPPLLGQHTDEVLE 380
Query: 121 DL-LNYDETTIAKLKEKKILG 140
+L L +E +L+E ++G
Sbjct: 381 ELGLPAEERR--RLREAGVIG 399
>gi|320162768|gb|EFW39667.1| L-carnitine dehydratase/bile acid-inducible protein F [Capsaspora
owczarzaki ATCC 30864]
Length = 432
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 143/306 (46%), Positives = 205/306 (66%), Gaps = 32/306 (10%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL------NN 267
++ L VR+LDL+R++A PFCTMLL D+GA+VIK+E P GD+ RKWGPPF +N
Sbjct: 4 NIALRGVRVLDLSRVLAAPFCTMLLGDMGADVIKIESPNGGDDTRKWGPPFAAPAVKRDN 63
Query: 268 TEL-------------------------STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAK 302
++ S YF NRNK+SV V+ K+ G QI+++LA
Sbjct: 64 HQVPVRQPESAQHTSAVGQADASAPAAESAYFLAANRNKRSVTVNLKSERGVQIVRELAA 123
Query: 303 QCDVLVENFVPGKLDRLNLGYKH-LSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIG 361
DVLVENF+PGK+++L LGY+ L +N +L+YCS+TGFG GPY+DR GYD++ ++G
Sbjct: 124 TADVLVENFLPGKMEQLGLGYEGVLQPLNPRLVYCSLTGFGRHGPYRDRAGYDLVTQAMG 183
Query: 362 GLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSM 421
GL+HITG P P KVG+A DLATGL+AHGA++ ALL + T +GQ++DC+L+S+ V++
Sbjct: 184 GLMHITGQPGSGPVKVGVAITDLATGLFAHGAILTALLARTHTNRGQRVDCSLMSSTVAL 243
Query: 422 LINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHL 481
L N+G+NYL AG E KR G +H ++VP+Q F++S+G + G+D Q+ C+V+ L L
Sbjct: 244 LANIGSNYLIAGKEAKRLGNAHPSIVPYQSFQSSDGEFVVAVGNDAQFVAFCRVLGLPDL 303
Query: 482 ALDPRY 487
D R+
Sbjct: 304 PRDSRF 309
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 71/139 (51%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V+ L L D R+ A RV +RE+L I A + T W+ P +N
Sbjct: 294 FCRVLGLPDLPRDSRFAKNADRVAHREVLIPLIAAMLRTQPTAHWMDALTREDLPCGPIN 353
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ QVF D H+ L++++ H G I + G V YS T + PPP LG+HTD +L
Sbjct: 354 NLQQVFNDPHVLATGLIQQVEHPTVGRISLTGSPVQYSDTPARIALPPPTLGQHTDQILA 413
Query: 121 DLLNYDETTIAKLKEKKIL 139
++L Y IA L+ K++
Sbjct: 414 EVLGYTPEQIAALRRDKVI 432
>gi|317122408|ref|YP_004102411.1| L-carnitine dehydratase/bile acid-inducible protein F
[Thermaerobacter marianensis DSM 12885]
gi|315592388|gb|ADU51684.1| L-carnitine dehydratase/bile acid-inducible protein F
[Thermaerobacter marianensis DSM 12885]
Length = 399
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 194/276 (70%), Gaps = 2/276 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL +R+LDL+R+++GP+CTM+LAD GA+VIK+E+P TGD+ R WGPPF+N + YF
Sbjct: 7 PLQGIRVLDLSRVLSGPYCTMMLADFGADVIKIERPETGDDTRAWGPPFVNGE--AAYFL 64
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNK+SV VD K PEG+ +I+ +A+QCDV+VENF PG +L +G L N +L+Y
Sbjct: 65 SVNRNKRSVVVDLKAPEGRDLIRRMARQCDVVVENFRPGTAAKLGIGPDDLLRENPRLVY 124
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
S++GFG GPY+D+PGYD IA ++GG++H+TG PD PP + G+A D+ G++A ++
Sbjct: 125 ASISGFGQDGPYRDKPGYDAIAQAMGGIMHVTGEPDRPPVRAGVAIADIGAGMWAAFGIL 184
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
AAL + ++G+GQ +D +LL Q++ L V NY G +R+G++H N+VP+Q F+T+
Sbjct: 185 AALWERERSGRGQVVDVSLLEGQIAWLTYVAGNYFATGQVPRRYGSAHPNLVPYQAFETA 244
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
+G++ + G+D ++ C+ LA DPRY T A
Sbjct: 245 DGHLIVAVGNDSLWRRFCEAAERPDLATDPRYATNA 280
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 76/141 (53%), Gaps = 3/141 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+ LA DPRY T A RVE+R+ L E+EA +TT EWL P +
Sbjct: 261 FCEAAERPDLATDPRYATNAGRVEHRDQLLPELEALMRSRTTAEWLERLDRAGVPAGPIL 320
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI+ + D H+Q +++ + H + G I++ G V S T + PPP LG+HTD VL+
Sbjct: 321 SIADLARDPHVQHRQMIVSLEHPRAGVIRVTGIPVKLSATPGAIYAPPPLLGQHTDEVLE 380
Query: 121 DL-LNYDETTIAKLKEKKILG 140
+L L +E +L+E ++G
Sbjct: 381 ELGLPAEERR--RLREAGVIG 399
>gi|410583194|ref|ZP_11320300.1| putative acyl-CoA transferase/carnitine dehydratase
[Thermaerobacter subterraneus DSM 13965]
gi|410506014|gb|EKP95523.1| putative acyl-CoA transferase/carnitine dehydratase
[Thermaerobacter subterraneus DSM 13965]
Length = 399
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 194/276 (70%), Gaps = 2/276 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL +R+LDL+R+++GP+CTM+LAD GA+VIK+E+P TGD+ R WGPPF+N + YF
Sbjct: 7 PLQGIRVLDLSRVLSGPYCTMMLADFGADVIKIERPETGDDTRAWGPPFVNGE--AAYFL 64
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNK+SV VD K PEG+ +I+ +A+QCDV+VENF PG +L +G L N +L+Y
Sbjct: 65 SVNRNKRSVVVDLKAPEGRDLIRRMARQCDVVVENFRPGTAAKLGIGPDDLLRENPRLVY 124
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
S++GFG GPY+D+PGYD IA ++GG++H+TG PD PP + G+A D+ G++A ++
Sbjct: 125 ASISGFGQDGPYRDKPGYDAIAQAMGGIMHVTGEPDRPPVRAGVAIADIGAGMWAAFGIL 184
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
AAL + ++G+GQ +D +LL Q++ L V NY G +R+G++H N+VP+Q F+T+
Sbjct: 185 AALWERERSGRGQVVDVSLLEGQIAWLTYVAGNYFATGQVPRRYGSAHPNLVPYQAFETA 244
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
+G++ + G+D ++ C+ LA DPRY T A
Sbjct: 245 DGHLIVAVGNDSLWRRFCEAAERPDLAADPRYATNA 280
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 76/141 (53%), Gaps = 3/141 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+ LA DPRY T A RVE+RE L E+EA +TT EWL P +
Sbjct: 261 FCEAAERPDLAADPRYATNAGRVEHREELLPELEALMRRRTTAEWLRRLDRAGVPAGPIL 320
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI+ + D H+Q +++ + H + G I++ G V S T + PPP LG+HTD VL+
Sbjct: 321 SIADLAQDPHVQHRQMIVSLEHPRAGVIRVTGIPVKLSATPGAIYAPPPLLGQHTDQVLE 380
Query: 121 DL-LNYDETTIAKLKEKKILG 140
+L L +E +L+E ++G
Sbjct: 381 ELGLPAEERR--RLREAGVIG 399
>gi|384490182|gb|EIE81404.1| hypothetical protein RO3G_06109 [Rhizopus delemar RA 99-880]
Length = 388
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 142/263 (53%), Positives = 187/263 (71%), Gaps = 7/263 (2%)
Query: 236 MLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL-------STYFTCVNRNKKSVCVDF 288
M+L DLGA+VIK+E P GD+ R WGPPF N + S YF CVNRNK+SV V+
Sbjct: 1 MMLGDLGADVIKIENPNGGDDTRGWGPPFAENKDAKDSTHGESAYFLCVNRNKRSVTVNM 60
Query: 289 KTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYK 348
KT G+Q++ DL K+ DVLVEN++PGKLD+L LGYK L++IN +L+Y S+TG+G GPY
Sbjct: 61 KTEGGRQLLYDLVKESDVLVENYLPGKLDQLGLGYKQLNKINPRLVYASITGYGQTGPYA 120
Query: 349 DRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQ 408
DRPGYD+I + GL+HITG P G P KVG+A DL TGLYAH A++A+LL + TGKGQ
Sbjct: 121 DRPGYDVIIEAEAGLMHITGEPSGAPVKVGVAITDLTTGLYAHSAILASLLQRSVTGKGQ 180
Query: 409 KIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQ 468
+DC+L+ +QV+ L N+ +NYL G E KR GTSH ++VP+QVF T + +V IG G+D Q
Sbjct: 181 HVDCSLIESQVASLANIASNYLIGGQEAKRMGTSHPSIVPYQVFPTRDSFVMIGAGNDGQ 240
Query: 469 YQDMCKVMNLQHLALDPRYLTGA 491
+ +C+ M L HL D R+ A
Sbjct: 241 FAKLCRRMGLDHLLDDARFQRNA 263
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 83/141 (58%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ M L HL D R+ A RV++R+ L + ++ + E+ WL G FP+A +N
Sbjct: 244 LCRRMGLDHLLDDARFQRNADRVKHRKELIQLLQDRFQEEDNHHWLETLNGAGFPFAPIN 303
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I Q F I+ LV E+ H + G IKIVGP V YS + +R PPP LGEHTD VL+
Sbjct: 304 NIEQTFQHPQIKARGLVHEVEHSRAGKIKIVGPPVKYSEAKTSIRRPPPLLGEHTDEVLE 363
Query: 121 DLLNYDETTIAKLKEKKILGL 141
LL Y + + KL+++ +GL
Sbjct: 364 QLLGYTKEKLEKLRKEGAIGL 384
>gi|110635300|ref|YP_675508.1| L-carnitine dehydratase/bile acid-inducible protein F
[Chelativorans sp. BNC1]
gi|110286284|gb|ABG64343.1| L-carnitine dehydratase/bile acid-inducible protein F
[Chelativorans sp. BNC1]
Length = 419
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 136/285 (47%), Positives = 200/285 (70%), Gaps = 2/285 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L R++DLTR++AGPF T +LADLGA+VIKVE+P GD+ R WGPPF+ E S+YF
Sbjct: 13 LKGARVIDLTRVVAGPFSTTILADLGADVIKVERPGVGDDSRSWGPPFVG--EASSYFLG 70
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
+NRN++S+ +D ++PEG QII+DL K DVLVE+F PG ++RL LGY+ L +IN L+YC
Sbjct: 71 LNRNRRSIAIDLQSPEGAQIIRDLVKHADVLVESFRPGVMERLGLGYETLRQINPSLVYC 130
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
+++ +G GPYK RPGYD++ +++GGL+ +TG P G P K G+A ID+ TGL+A ++
Sbjct: 131 AISAYGQTGPYKSRPGYDLMISAMGGLMSVTGTPGGEPVKTGVALIDVCTGLHAAIGILG 190
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
AL H+ TG+GQ++D +LL +Q++MLINV + YL G K G++HANV P+Q F + +
Sbjct: 191 ALYHRQATGEGQRVDASLLGSQLAMLINVASEYLIGGSIAKPQGSAHANVAPYQAFPSKD 250
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
G+V +G+ +DK + MC + DPR++T +A L+
Sbjct: 251 GWVLMGSPNDKLFGVMCDALGQPQWKHDPRFVTNGDRVAHREELV 295
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 72/143 (50%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
MC + DPR++T RV +RE L I T + T+ W+ + P A +N
Sbjct: 266 MCDALGQPQWKHDPRFVTNGDRVAHREELVALISDVTRQHPTDYWVDLLSSTGAPVAPIN 325
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ +VF +E +Q + V+++ H +G +V A+ S T P P P LG+H+ VL
Sbjct: 326 TMDKVFQNEQVQHLAQVEQVEHPLFGSYPVVTSALRMSATPPVKAAPAPRLGQHSREVLS 385
Query: 121 DLLNYDETTIAKLKEKKILGLIE 143
++L +++ I KL ++ E
Sbjct: 386 EVLGWEDDQIEKLIAAGVIEFRE 408
>gi|336369680|gb|EGN98021.1| Hpt, histidine phosphotransferase protein [Serpula lacrymans var.
lacrymans S7.3]
Length = 564
Score = 310 bits (795), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 147/298 (49%), Positives = 205/298 (68%), Gaps = 12/298 (4%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPP---FLNNTEL-- 270
PL +R+LDLTR++AGP TMLLADLGA+VIKVE+ GD+ R W PP L N
Sbjct: 37 PLKGIRVLDLTRVLAGPTATMLLADLGADVIKVEEVERGDDTRSWSPPSAPLLENAPSEA 96
Query: 271 ------STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYK 324
S YF VNRNK+S+ V+FKTP+G ++++ L K DVLVENFV GKL + LG++
Sbjct: 97 SHLPPDSAYFLAVNRNKRSLTVNFKTPDGLEVVRRLIKTSDVLVENFVSGKLASMGLGWE 156
Query: 325 HLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDL 384
+IN +L+Y S+TG+G GPY+ GYD++ + GL+HITG PD PP KVG+A+ D+
Sbjct: 157 DCKKINPRLVYASITGYGQTGPYRQAAGYDVVIEAEAGLMHITGEPDRPPAKVGVAATDI 216
Query: 385 ATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHA 444
ATGLYAHGA+MAALL + +TG+G IDCNL +Q++ L N+ +NYL AG E R GT+H
Sbjct: 217 ATGLYAHGAIMAALLSRQQTGEGVWIDCNLFESQLAGLANIASNYLIAGQEAGRHGTAHP 276
Query: 445 NVVPHQVFKTSNGYVTIGTGSDKQYQDMCK-VMNLQHLALDPRYLTGALILAMTSHLI 501
++VP+QVF +G++ IG G+DKQ++ +C+ ++ L L D ++ A +A + LI
Sbjct: 277 SIVPYQVFPCKDGFLMIGAGNDKQFRILCEAILQLPELVDDAKFSNNAARVANRTELI 334
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 5/118 (4%)
Query: 1 MCK-VMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQV 59
+C+ ++ L L D ++ A RV NR L I + + W+ F G P+ +
Sbjct: 304 LCEAILQLPELVDDAKFSNNAARVANRTELIDIISGTLKGQDRDYWIERFTGEGVPFGPI 363
Query: 60 NSISQVFADEHIQDI--KLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHT 115
N+I Q F EH Q + + E+ H + G IK+V PAV Y+ + VR PPP L +HT
Sbjct: 364 NNIRQTF--EHPQAVARESTVEVDHPRAGKIKLVAPAVTYNGQRMPVRIPPPWLSQHT 419
>gi|395331118|gb|EJF63500.1| CAIB/BAIF family enzyme [Dichomitus squalens LYAD-421 SS1]
Length = 448
Score = 310 bits (795), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 145/298 (48%), Positives = 201/298 (67%), Gaps = 12/298 (4%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL----- 270
PL +++LDLTR++AGP TMLLADLGA+V+KVE+ GD+ R W PP +E
Sbjct: 43 PLQGIKVLDLTRVLAGPTATMLLADLGADVVKVEEVSRGDDTRSWYPPAAPLSEFAPEEA 102
Query: 271 ------STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYK 324
S YF VNRNK+S+ V+FK PEG I+ L ++ DVLVENFV GKL LG++
Sbjct: 103 AHLPPESAYFLAVNRNKRSITVNFKEPEGLAIVHKLVQRSDVLVENFVSGKLAEFGLGWE 162
Query: 325 HLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDL 384
+IN +LIY S+TG+G GPY+ GYD+I + GL+HITG PDGPPCKVG+A+ D+
Sbjct: 163 DCKKINPRLIYASITGYGQTGPYRKAAGYDVIVEAEAGLMHITGEPDGPPCKVGVAATDI 222
Query: 385 ATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHA 444
ATGLYAHGA+MA LL + +TG+G IDCNL +Q++ L N+ +NYL AG EG R GT+H
Sbjct: 223 ATGLYAHGAIMAGLLSRAQTGQGAWIDCNLFESQLAGLANIASNYLIAGQEGGRHGTAHP 282
Query: 445 NVVPHQVFKTSNGYVTIGTGSDKQYQDMCK-VMNLQHLALDPRYLTGALILAMTSHLI 501
++VP+QVF +G++ IG G+DKQ++ + ++ L DP++ + +A L+
Sbjct: 283 SIVPYQVFPCKDGFIMIGAGNDKQFKLFAEAILGRPDLPADPKFSSNKARVANRQELV 340
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 73/136 (53%), Gaps = 1/136 (0%)
Query: 4 VMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSIS 63
++ L DP++ + RV NR+ L I ++ + W+ G+ P+ +N+I
Sbjct: 314 ILGRPDLPADPKFSSNKARVANRQELVALITETLQKEGRDHWIEKLTGLGVPFGPINNIH 373
Query: 64 QVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLL 123
Q FA + ++V E+ H + G IK+V PAV Y+ + + PPP L +HT VL +L
Sbjct: 374 QTFAHPQVAARQMVSEVEHPRAGKIKLVSPAVTYNGRRMPITRPPPYLSQHTREVLTELG 433
Query: 124 NYDETTIAKLKEKKIL 139
DE T ++LK KKI+
Sbjct: 434 YRDEET-SELKAKKII 448
>gi|226293548|gb|EEH48968.1| formyl-coenzyme A transferase [Paracoccidioides brasiliensis Pb18]
Length = 412
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 143/277 (51%), Positives = 204/277 (73%), Gaps = 4/277 (1%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKW---GPPFLNNTE-LST 272
L +ILDL+RI+AGPFCT +LAD GA+VIKVEQP GD+ R W G +TE +S
Sbjct: 59 LHGFKILDLSRILAGPFCTQILADYGADVIKVEQPGKGDDTRYWRTEGEGEKWSTEGISC 118
Query: 273 YFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQ 332
YF CVNRNK+SV +D K+ +G++II DL K+ DV+VENF+PGK+D+L +GY+ +S++N
Sbjct: 119 YFACVNRNKRSVTLDLKSEKGREIIFDLVKRADVVVENFLPGKMDKLGIGYETISKVNPA 178
Query: 333 LIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHG 392
+I+ S++G+G+ GPY R GYDIIAA+ GGLLHITG DGPP K GI DL TGL+ HG
Sbjct: 179 IIHASISGYGATGPYSQRAGYDIIAAAEGGLLHITGEADGPPTKPGIGLTDLCTGLFMHG 238
Query: 393 AVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVF 452
A++AAL +++TGKGQK++ +L TQVS++ NV +N+LN G E +RWGT+H ++VP++ F
Sbjct: 239 AIIAALQARHQTGKGQKLEGSLFETQVSLMTNVASNWLNMGQEAQRWGTAHPSIVPYEAF 298
Query: 453 KTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
KT N ++ +G +++Q+ + + +LA D R+ T
Sbjct: 299 KTKNSHIVLGATNNRQFGILADRLGSPYLAHDGRFRT 335
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%)
Query: 9 HLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFAD 68
+LA D R+ T RV NR L + KTT+EWL IF+G PY +N++ +VF
Sbjct: 326 YLAHDGRFRTNDSRVRNRVELNGILRELFKSKTTDEWLTIFEGSGMPYGPINNLEKVFTH 385
Query: 69 EHIQDIKLVKEI 80
Q ++++ I
Sbjct: 386 AQTQAREMIQSI 397
>gi|163848875|ref|YP_001636919.1| L-carnitine dehydratase/bile acid-inducible protein F [Chloroflexus
aurantiacus J-10-fl]
gi|222526831|ref|YP_002571302.1| L-carnitine dehydratase/bile acid-inducible protein F [Chloroflexus
sp. Y-400-fl]
gi|163670164|gb|ABY36530.1| L-carnitine dehydratase/bile acid-inducible protein F [Chloroflexus
aurantiacus J-10-fl]
gi|222450710|gb|ACM54976.1| L-carnitine dehydratase/bile acid-inducible protein F [Chloroflexus
sp. Y-400-fl]
Length = 391
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 135/273 (49%), Positives = 194/273 (71%), Gaps = 1/273 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L+++ ILD +R++AGP+ TM+LAD+GA VIK+EQP TGDE R+WGPPF +N LS YF
Sbjct: 5 LADLLILDFSRVLAGPYATMVLADMGARVIKIEQPGTGDETRQWGPPFADNG-LSAYFIA 63
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
VNRNK+S+ ++ K P GQ I ++LA++ DVL+ENF+PG + R+ LGY L +N +LIYC
Sbjct: 64 VNRNKQSITLNLKHPTGQAIARELARRADVLIENFLPGTMARMGLGYNDLRPLNPRLIYC 123
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S+TG+G GP DRPGYD + + GGL+ ITG PDGPP K G+A D+ TGLYA +++A
Sbjct: 124 SITGYGQYGPDADRPGYDTVIQAEGGLMSITGEPDGPPMKTGVAVADITTGLYAATSILA 183
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
AL ++ +G+GQ ID +L Q+S L NV + YL +G +R+G +H+ +VP+Q F ++
Sbjct: 184 ALHYRTHSGEGQYIDLSLFDVQLSWLANVASAYLVSGKPPRRYGNAHSTIVPYQPFAAAD 243
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
GYV + G+D+Q+ C+ +N A D R+ T
Sbjct: 244 GYVMVAVGNDQQFTRFCQALNHPEWATDERFAT 276
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 59/139 (42%), Gaps = 6/139 (4%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+ +N A D R+ T RV NRE + I ++ W+ + P VN
Sbjct: 259 FCQALNHPEWATDERFATNPARVTNREQIITAIAEVMAGESVAFWIERLRAAQVPCGPVN 318
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I Q +V+ I I++VGPA +S T +R+ PPALG T VL
Sbjct: 319 DIPTALNSRQAQARGMVRSID-----GIRMVGPAPVFSATPATIRSAPPALGADTAAVLA 373
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ L Y I ++ I+
Sbjct: 374 E-LGYSADQIRHFYDQGIV 391
>gi|443690994|gb|ELT92978.1| hypothetical protein CAPTEDRAFT_150820 [Capitella teleta]
Length = 375
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 142/254 (55%), Positives = 189/254 (74%), Gaps = 2/254 (0%)
Query: 236 MLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTCVNRNKKSVCVDFKTPEGQQ 295
M+L DLGAE+IKVE+P GD+ R WGPP++++ S Y+ VNRNKKS+ VD T EG
Sbjct: 1 MILGDLGAEIIKVERPGIGDDTRAWGPPWVDSE--SAYYLSVNRNKKSIAVDISTEEGSN 58
Query: 296 IIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDI 355
I+K+LA DVLVEN++P KL + LG+K L++I LIY S+TGFG GPY R GYD
Sbjct: 59 IVKELACNSDVLVENYIPNKLSKYGLGFKQLNDIAPHLIYLSITGFGQTGPYSQRGGYDN 118
Query: 356 IAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLL 415
IAA++GGL+HITG DG PC+VG+A DL+TGLYA+GA++AALL+K KTG GQ IDCNLL
Sbjct: 119 IAAAVGGLMHITGPIDGEPCRVGVAMTDLSTGLYAYGAILAALLNKQKTGIGQHIDCNLL 178
Query: 416 STQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKV 475
STQV+ L ++ +N+LN + RWGT H ++VP+Q FKT +GY+ IG G+D Y ++C+
Sbjct: 179 STQVATLTHIASNWLNCEAKASRWGTGHGSIVPYQAFKTIDGYIMIGAGNDVLYAELCER 238
Query: 476 MNLQHLALDPRYLT 489
++L +L D RYLT
Sbjct: 239 LDLPNLIKDERYLT 252
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 82/139 (58%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ ++L +L D RYLT RV+NR+ L + K K+ EWL F+G FP+ +N
Sbjct: 235 LCERLDLPNLIKDERYLTNEDRVKNRKSLVDVLSEKFALKSNAEWLEAFEGSRFPFGPIN 294
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I QVF D +Q +++EI H+ G+I++ GPAV YS +++ PP LG+HT VL+
Sbjct: 295 DIGQVFQDPQVQHNNMIQEIEHQTVGNIRVPGPAVKYSEGSLSLQSSPPFLGQHTREVLE 354
Query: 121 DLLNYDETTIAKLKEKKIL 139
L YD I +L K ++
Sbjct: 355 KQLKYDNKIIDELANKGVI 373
>gi|336382461|gb|EGO23611.1| hypothetical protein SERLADRAFT_469716 [Serpula lacrymans var.
lacrymans S7.9]
Length = 446
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 147/298 (49%), Positives = 205/298 (68%), Gaps = 12/298 (4%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPP---FLNNTEL-- 270
PL +R+LDLTR++AGP TMLLADLGA+VIKVE+ GD+ R W PP L N
Sbjct: 41 PLKGIRVLDLTRVLAGPTATMLLADLGADVIKVEEVERGDDTRSWSPPSAPLLENAPSEA 100
Query: 271 ------STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYK 324
S YF VNRNK+S+ V+FKTP+G ++++ L K DVLVENFV GKL + LG++
Sbjct: 101 SHLPPDSAYFLAVNRNKRSLTVNFKTPDGLEVVRRLIKTSDVLVENFVSGKLASMGLGWE 160
Query: 325 HLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDL 384
+IN +L+Y S+TG+G GPY+ GYD++ + GL+HITG PD PP KVG+A+ D+
Sbjct: 161 DCKKINPRLVYASITGYGQTGPYRQAAGYDVVIEAEAGLMHITGEPDRPPAKVGVAATDI 220
Query: 385 ATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHA 444
ATGLYAHGA+MAALL + +TG+G IDCNL +Q++ L N+ +NYL AG E R GT+H
Sbjct: 221 ATGLYAHGAIMAALLSRQQTGEGVWIDCNLFESQLAGLANIASNYLIAGQEAGRHGTAHP 280
Query: 445 NVVPHQVFKTSNGYVTIGTGSDKQYQDMCK-VMNLQHLALDPRYLTGALILAMTSHLI 501
++VP+QVF +G++ IG G+DKQ++ +C+ ++ L L D ++ A +A + LI
Sbjct: 281 SIVPYQVFPCKDGFLMIGAGNDKQFRILCEAILQLPELVDDAKFSNNAARVANRTELI 338
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 73/142 (51%), Gaps = 6/142 (4%)
Query: 1 MCK-VMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQV 59
+C+ ++ L L D ++ A RV NR L I + + W+ F G P+ +
Sbjct: 308 LCEAILQLPELVDDAKFSNNAARVANRTELIDIISGTLKGQDRDYWIERFTGEGVPFGPI 367
Query: 60 NSISQVFADEHIQDI--KLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDY 117
N+I Q F EH Q + + E+ H + G IK+V PAV Y+ + VR PPP L +HT
Sbjct: 368 NNIRQTF--EHPQAVARESTVEVDHPRAGKIKLVAPAVTYNGQRMPVRIPPPWLSQHTGE 425
Query: 118 VLKDLLNYDETTIAKLKEKKIL 139
+L + + Y IA L+ ++I+
Sbjct: 426 ILSE-MGYTSEEIAALRTERIV 446
>gi|347751223|ref|YP_004858788.1| L-carnitine dehydratase/bile acid-inducible protein F [Bacillus
coagulans 36D1]
gi|347583741|gb|AEP00008.1| L-carnitine dehydratase/bile acid-inducible protein F [Bacillus
coagulans 36D1]
Length = 392
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 139/273 (50%), Positives = 192/273 (70%), Gaps = 2/273 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
LS +++LDLTR++AGPFCTM+L DLGAEVIKVE P DE R WGPPF N +S Y+ C
Sbjct: 5 LSGIKVLDLTRVLAGPFCTMILGDLGAEVIKVEAPGGSDETRGWGPPFQQN--VSAYYLC 62
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
NRNKKS+ +D K G++II+ LAK DV++ NF G ++RL LGY+ L +N +L+YC
Sbjct: 63 TNRNKKSITLDLKRESGKEIIRRLAKNSDVVIHNFKTGTMERLGLGYETLRTLNPRLVYC 122
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S+TGFG GPYKD PGYD I ++ GL+ ITG +GPP K G+A D+ TGLYA + A
Sbjct: 123 SITGFGETGPYKDLPGYDFIIQAMSGLMSITGEENGPPLKTGVAITDVLTGLYACIGIEA 182
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
ALL + TG+GQKID +L + + L+N+ +N+L +G R G H N+VP+Q F+TS+
Sbjct: 183 ALLAREHTGEGQKIDLSLYDSATTALVNIASNFLMSGNIPGRLGNRHPNIVPYQSFQTSD 242
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
G + I G+D+Q+Q +C++++L LA D R+ T
Sbjct: 243 GEIAIAVGNDRQFQTLCELLDLGQLASDERFAT 275
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 1/136 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C++++L LA D R+ T RVENRE L +E + W + P +
Sbjct: 258 LCELLDLGQLASDERFATNPKRVENRETLIPILEKVFRTRPVSFWREALEKRKIPCGPIQ 317
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
S+ QV AD ++ ++ ++ H G+IK+V + S T PP GEHT+ +L+
Sbjct: 318 SLEQVAADPQLEAREMFIKMEHPIAGEIKLVASPLKLSETPVRYVQHPPMPGEHTEEILR 377
Query: 121 DLLNYDETTIAKLKEK 136
+ + + I KE+
Sbjct: 378 R-IGFSQEEIEAYKEE 392
>gi|255946535|ref|XP_002564035.1| Pc20g15630 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588770|emb|CAP86892.1| Pc20g15630 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 452
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 136/279 (48%), Positives = 198/279 (70%), Gaps = 6/279 (2%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNT------E 269
PL +RILDLTR++AGPFCT +LA+ GAEV+KVE P GD+ R W + +
Sbjct: 51 PLLGIRILDLTRVLAGPFCTQILANYGAEVLKVEHPKGGDDTRLWRTAAEKHVWKSTGKD 110
Query: 270 LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEI 329
+STYF +NRNK S+ ++ K +G++I+ L K+ DV+VENFVPGK+D + +GY+ L EI
Sbjct: 111 MSTYFCAINRNKLSMTLNLKQEKGREILFRLVKEADVVVENFVPGKMDEMGIGYEKLREI 170
Query: 330 NSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLY 389
N +IY SV+G+G+ GPY R GYD IAA+ G+L+ITG +GPP + G+ D++TGLY
Sbjct: 171 NPSIIYASVSGYGASGPYSHRAGYDAIAAAEAGMLYITGERNGPPTRPGLGLTDMSTGLY 230
Query: 390 AHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPH 449
HGA++AAL + TG+GQKID +L +QVS+L NV ++LN G KRWGT H ++VP+
Sbjct: 231 LHGAILAALYARRDTGRGQKIDTSLFESQVSLLSNVAMSWLNGGEHAKRWGTEHPSIVPY 290
Query: 450 QVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYL 488
Q FKT +G++ +G +++Q+Q +C+++ L LA DPR++
Sbjct: 291 QAFKTKDGHLVLGATNNRQFQTLCRLVKLSELATDPRFV 329
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 81/141 (57%), Gaps = 3/141 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+++ L LA DPR++ + RV+NR L + +E K T+ WL G PY VN
Sbjct: 313 LCRLVKLSELATDPRFVDNSSRVQNRAELKEILEPIIRRKPTKVWLSDLDGSGLPYGPVN 372
Query: 61 SISQVFADEHIQDIKLVKEISHE--KYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
+I +VF+ +V + HE + +I+++G V +S T+P++R PP+LGEHT++
Sbjct: 373 TIEEVFSHPQTAARDMVHSLPHEASESEEIRLLGTPVKFSGTKPQIRRSPPSLGEHTNFT 432
Query: 119 LKDLLNYDETTIAKLKEKKIL 139
L + + + I ++E+ I+
Sbjct: 433 L-ERMGFSAKEIEVMREQGIV 452
>gi|295695027|ref|YP_003588265.1| L-carnitine dehydratase/bile acid-inducible protein F [Kyrpidia
tusciae DSM 2912]
gi|295410629|gb|ADG05121.1| L-carnitine dehydratase/bile acid-inducible protein F [Kyrpidia
tusciae DSM 2912]
Length = 436
Score = 307 bits (786), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 132/276 (47%), Positives = 192/276 (69%), Gaps = 2/276 (0%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTY 273
+ PL+ VR+ DL+R++AGPFCTMLL DLGAEVIKVE P GDE R WGPPF + +S Y
Sbjct: 19 AAPLAGVRVFDLSRVLAGPFCTMLLGDLGAEVIKVETPRGGDETRSWGPPFAGD--VSAY 76
Query: 274 FTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQL 333
+ C NRNK+S+ V+ K+ EG ++I+ LA + DV++ENF PGK + L +GY L +I L
Sbjct: 77 YLCANRNKRSIAVNLKSAEGLEVIRRLAARSDVVIENFRPGKAEELGVGYAQLKKIRPDL 136
Query: 334 IYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGA 393
+YCS++GFG GPY++ PGYD I ++ GL+ ITG DG P KVG+A D+ TGL+A
Sbjct: 137 VYCSISGFGQTGPYRNLPGYDFIVQAMSGLMSITGEADGRPMKVGVAVADVFTGLFAALG 196
Query: 394 VMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFK 453
+++AL K +TG GQ ID L+ Q++ ++NV +NYL G +R+G H N+VP+Q F+
Sbjct: 197 IVSALRVKERTGVGQYIDLALMDVQIAAMVNVASNYLVGGNVPRRYGNQHPNIVPYQTFE 256
Query: 454 TSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
++G + + G+D+Q++ +C+ M + A DPR+ T
Sbjct: 257 AADGEIAVAVGNDRQFRRLCETMGVPEWAEDPRFAT 292
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 67/122 (54%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ M + A DPR+ T RVENR++L ++ + +T EW+ P +
Sbjct: 275 LCETMGVPEWAEDPRFATNDRRVENRDVLIPMLQERFRTRTGREWMTALAEHEIPCGPIQ 334
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ +VFAD +Q ++V+ + H G++ +V + S T ++R PP LGEHT+ +L
Sbjct: 335 TMDRVFADPQVQAREMVRRLVHPSAGEVPVVANPLKLSETPVQIRRHPPDLGEHTEEILL 394
Query: 121 DL 122
+L
Sbjct: 395 EL 396
>gi|383764857|ref|YP_005443839.1| putative CoA-transferase [Caldilinea aerophila DSM 14535 = NBRC
104270]
gi|381385125|dbj|BAM01942.1| putative CoA-transferase [Caldilinea aerophila DSM 14535 = NBRC
104270]
Length = 398
Score = 307 bits (786), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 134/273 (49%), Positives = 193/273 (70%), Gaps = 2/273 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
LS++R+LDL+RI+AGP+CTM+LAD GA+VIK+E+P+TGD R WGPP++ + S YF
Sbjct: 6 LSDIRVLDLSRILAGPYCTMVLADYGADVIKIEEPLTGDGARAWGPPWVGDQ--SAYFLA 63
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
NRNK+SV VD + PEG+QI+ +LA++ DV++ENF G ++L + Y LS +N +LIYC
Sbjct: 64 ANRNKRSVAVDLRRPEGRQIVHELARRSDVVIENFKVGGAEKLGVDYATLSALNPRLIYC 123
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S+TG+G GPYKDR GYD + + GG++ ITG DG P KVG+A D+ +GL+A A++A
Sbjct: 124 SITGYGQTGPYKDRAGYDFVIQAEGGIMSITGPEDGEPYKVGVAIADITSGLFAATAILA 183
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
AL + ++GKGQ ID LL Q++ L N+ NYL G KRWG +H ++VP++ F T++
Sbjct: 184 ALHERERSGKGQAIDIALLDAQIAWLANIAQNYLATGEPPKRWGNAHPSIVPYEAFPTAD 243
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
G + +G GSD Q++ C+ LA D R+ T
Sbjct: 244 GRIAVGIGSDAQFRKFCEAAGHPELAEDERFST 276
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 74/139 (53%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+ LA D R+ T RVE+R+ L ++A +T+ EWL + + P +N
Sbjct: 259 FCEAAGHPELAEDERFSTNRARVEHRQTLIPLLQALFRTRTSAEWLSLLAALGVPAGPIN 318
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ +Q +V+E+ H G I+++GP +S T ++R PP LG HTD VL+
Sbjct: 319 DVAAALNSPQVQARDMVQEVEHPTLGRIRLLGPVAKFSRTPAQIRRAPPPLGYHTDEVLR 378
Query: 121 DLLNYDETTIAKLKEKKIL 139
DLL+Y + +A L+ I+
Sbjct: 379 DLLHYSDAQLADLRRCGII 397
>gi|426356005|ref|XP_004065465.1| PREDICTED: LOW QUALITY PROTEIN: caiB/baiF CoA-transferase family
protein C7orf10 homolog [Gorilla gorilla gorilla]
Length = 373
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 147/277 (53%), Positives = 194/277 (70%), Gaps = 19/277 (6%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL V+ILDLTR++AGPF TM L DLGAEVIKVE+P +GD+ R WGPPF+ TE STY+
Sbjct: 6 PLEGVKILDLTRVLAGPFATMNLGDLGAEVIKVERPGSGDDTRTWGPPFVG-TE-STYYL 63
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNKK LA CDV VEN+VPGKL + LGY+ + EI +IY
Sbjct: 64 SVNRNKK-----------------LAAVCDVFVENYVPGKLSAMGLGYEDIDEIAPHIIY 106
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+G GP R GYD +A+++ GL+HITG +G P + G+A DLATGLYA+GA+M
Sbjct: 107 CSITGYGQTGPISQRAGYDAVASAVSGLMHITGPENGDPVRPGVAMTDLATGLYAYGAIM 166
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
A L+ KYKTGKG IDCNLLS+QV+ L ++ ANYL E KRWGT+H ++VP+Q FKT
Sbjct: 167 AGLIQKYKTGKGLFIDCNLLSSQVACLSHIAANYLIGQKEAKRWGTAHGSIVPYQAFKTK 226
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
+GY+ +G G+++Q+ +CK+++L L + +Y T L
Sbjct: 227 DGYIVVGAGNNQQFATVCKILDLPELIDNSKYKTNHL 263
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK+++L L + +Y T LRV NR+ L K + + E+ T +WL +F+G PY +N
Sbjct: 243 VCKILDLPELIDNSKYKTNHLRVHNRKELIKILSERFEEELTSKWLHLFEGSGVPYGPIN 302
Query: 61 SISQVFAD 68
++ VFA+
Sbjct: 303 NMKNVFAE 310
>gi|302880821|ref|XP_003039341.1| hypothetical protein NECHADRAFT_98391 [Nectria haematococca mpVI
77-13-4]
gi|256720168|gb|EEU33628.1| hypothetical protein NECHADRAFT_98391 [Nectria haematococca mpVI
77-13-4]
Length = 439
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 142/291 (48%), Positives = 204/291 (70%), Gaps = 9/291 (3%)
Query: 207 ALSSENP---SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKW--- 260
+ S+ +P S PLS V+ILDLTR++AGPFCT +LAD GA+V+KVE P GD+ R W
Sbjct: 26 SFSTTSPCPNSGPLSGVKILDLTRVLAGPFCTQILADYGADVVKVEHPRGGDDTRLWREV 85
Query: 261 GPPFLNNTE---LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLD 317
G + + S YF VNRNK+S+ V+ K +G++II LA + DV+VENF+PGKLD
Sbjct: 86 GEDKIWKSRAPGTSIYFNTVNRNKRSISVNLKNEKGREIILQLAHEADVVVENFIPGKLD 145
Query: 318 RLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKV 377
RL LGY+ L N +I S++G+G+ GPY R GYD++ A+ GGLLH+TG DGPP K
Sbjct: 146 RLGLGYQALKAANPSIILASISGYGADGPYATRAGYDVVGAAEGGLLHVTGEADGPPTKP 205
Query: 378 GIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGK 437
G+ +D+ TGLY HGA+++ALL + KTG GQK+D +L VS+L NVG +++N E +
Sbjct: 206 GVGLVDMCTGLYLHGAIVSALLARQKTGVGQKLDTSLFEATVSILANVGMSWVNLEKEAR 265
Query: 438 RWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYL 488
RWGT+H +VP++ F+T +G + IG +D+Q+Q++C+++ + LA DPRY+
Sbjct: 266 RWGTAHPAIVPYEAFRTKDGSLVIGAVNDRQFQNLCQLLGDRDLATDPRYV 316
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 80/136 (58%), Gaps = 3/136 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+++ + LA DPRY+ + RV NR+ L + ++ M+KTT EW + +G PY +N
Sbjct: 300 LCQLLGDRDLATDPRYVDNSARVLNRKELKQALDTLFMKKTTGEWETVLEGSGMPYGPIN 359
Query: 61 SISQVFADEHIQDIKLVKEISHEK--YGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
++ VF+ +V+ + G IK++G V +S T+P +R PP+LG+HT+ +
Sbjct: 360 TLENVFSHPQALARHMVETVEQGAAVAGTIKVLGIPVKFSETKPSIRGGPPSLGQHTNLI 419
Query: 119 LKDLLNYDETTIAKLK 134
L++ L Y + IA L+
Sbjct: 420 LRE-LGYSSSAIADLR 434
>gi|393722372|ref|ZP_10342299.1| L-carnitine dehydratase/bile acid-inducible protein F [Sphingomonas
sp. PAMC 26605]
Length = 403
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 135/277 (48%), Positives = 195/277 (70%), Gaps = 1/277 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-NNTELSTYFT 275
L+ V++LDL+R++AGP+ T +L DLGAEV+K+EQP GD+ R+WGPP L +N+ S Y+
Sbjct: 8 LAGVKVLDLSRVLAGPWATQMLGDLGAEVLKIEQPGQGDDTRRWGPPALADNSGDSAYYL 67
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
C NRNK+S+ +D P G +I+ LA Q DVLVENF G L + L Y L+ IN +L+Y
Sbjct: 68 CANRNKRSLAIDLAQPAGADLIRRLAAQSDVLVENFRVGGLAKYGLDYASLAAINPRLVY 127
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TGFG GPYKD+ GYD + ++GGL+ +TG DGPP KVG+ +DL TG YA A++
Sbjct: 128 CSITGFGQDGPYKDKGGYDFLIQAMGGLMSVTGEADGPPMKVGVPIVDLFTGTYATVAIL 187
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
AAL H+ TG+GQ +DC LL TQ++ML N +N+LN G R G H N+VP++ ++T+
Sbjct: 188 AALRHRDATGRGQHVDCALLDTQLAMLSNQASNWLNGGTVPVRRGNDHPNIVPYRDYETA 247
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
+G + + G+D+Q++D +V+ L+ L DPR+ + AL
Sbjct: 248 DGAIVVALGNDRQFRDFLRVLGLRDLGDDPRFASVAL 284
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 55/127 (43%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V+ L+ L DPR+ + ALR E+R L + + +++ + + P +V
Sbjct: 264 FLRVLGLRDLGDDPRFASVALRSEHRAALHAHLAPAVAQWGSDDLVAAMEAAKLPAGKVA 323
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ ++FAD + + V+ ++ +++VG S T PP G T L
Sbjct: 324 GLPEIFADPQVAHRESVQAMARADGTPLQVVGFPAKLSETPASYDRAPPRAGADTREALV 383
Query: 121 DLLNYDE 127
+ L E
Sbjct: 384 EALGLSE 390
>gi|443899564|dbj|GAC76895.1| predicted L-carnitine dehydratase [Pseudozyma antarctica T-34]
Length = 497
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 145/324 (44%), Positives = 201/324 (62%), Gaps = 22/324 (6%)
Query: 190 ENENKISLYENFYSLDLALSSENPSLP--LSNVRILDLTRIIAGPFCTMLLADLGAEVIK 247
E ++ S +E PS+P L +RI+DLTR++AGP+CTMLLADLGA+VIK
Sbjct: 53 EQRTFVTSQPRLSSASATAEAEEPSIPPPLKGIRIVDLTRVLAGPYCTMLLADLGADVIK 112
Query: 248 VEQPVTGDECRKWGPPFLNNT--------------------ELSTYFTCVNRNKKSVCVD 287
VE P GD+ R W PPF S YF VNR+K+S+ VD
Sbjct: 113 VEHPRGGDDTRAWLPPFAKPPTGKDALQPPPGKEDYWASLPPESAYFLSVNRSKRSITVD 172
Query: 288 FKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPY 347
K+P G++II DL DV+VEN++PGKL + LGY+ L +I +IY S+TG+G G Y
Sbjct: 173 LKSPAGKKIIYDLVANADVVVENYLPGKLASMGLGYEDLKKIKPDIIYASLTGYGQTGSY 232
Query: 348 KDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKG 407
+D+ GYD+I A+ G++HITG D PP K+G+A DL TGLY HGA+MAALL + +TGKG
Sbjct: 233 RDKAGYDVIIAADAGMMHITGEADRPPVKIGVAMTDLTTGLYVHGAIMAALLGRAQTGKG 292
Query: 408 QKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDK 467
ID +L +Q++ L N+ +NYL AG E R G H ++VP+Q F+ +G + +G G+D
Sbjct: 293 VHIDASLFESQIASLANIASNYLIAGQEAGRHGDKHPSIVPYQTFQAKDGRIMLGAGNDG 352
Query: 468 QYQDMCKVMNLQHLALDPRYLTGA 491
Q++ + K++ LA D RY T A
Sbjct: 353 QFRFLSKLLGRPELATDERYATNA 376
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 78/142 (54%), Gaps = 4/142 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+ K++ LA D RY T A RVE+R+ L ++ KT +EW + G P A +
Sbjct: 357 LSKLLGRPELATDERYATNAARVEHRDTLIPLLDELLQAKTVQEWCDLING-KIPAAPIR 415
Query: 61 SISQVFADEHIQ--DIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
+I F DEH Q D K+V E+ H + G IKIV PAV Y + ++ PPP LG+HTD V
Sbjct: 416 NIRGTF-DEHPQSKDRKVVAEVEHPRAGKIKIVAPAVRYGGGKMKITRPPPVLGQHTDEV 474
Query: 119 LKDLLNYDETTIAKLKEKKILG 140
L L E +A+L++ +G
Sbjct: 475 LTQELGMSEAEVAELRKAGSIG 496
>gi|91780271|ref|YP_555478.1| Alpha-methylacyl-CoA racemase [Burkholderia xenovorans LB400]
gi|91692931|gb|ABE36128.1| Alpha-methylacyl-CoA racemase [Burkholderia xenovorans LB400]
Length = 435
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 140/283 (49%), Positives = 189/283 (66%), Gaps = 9/283 (3%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TEL 270
PL +R+LDL+R++AGP+CT LADLGA VIK+E+P GDE R WGPPFL + T
Sbjct: 20 PLEGIRVLDLSRVLAGPWCTQNLADLGARVIKIERPGAGDETRSWGPPFLRDAGGRDTSE 79
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
S Y+ C NRNK+SV +D +PEG ++++ AK CDVLVENF G L + L Y+ L+E+N
Sbjct: 80 SAYYLCANRNKQSVAIDIGSPEGAALVREFAKTCDVLVENFKVGGLKKYGLDYESLAELN 139
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLAT 386
+L+YCSVTGFG GP R GYD + +GGL+ ITG PD G P KVG+A DL
Sbjct: 140 PRLVYCSVTGFGQTGPLSKRAGYDFLVQGMGGLMSITGEPDDIPGGGPEKVGVAVTDLMA 199
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANV 446
G+YA V+AAL+ + ++G+GQ +D LL Q++ML N NYL GI +R G +H NV
Sbjct: 200 GMYATTGVLAALMERARSGRGQHVDIALLDCQLAMLANQSMNYLTTGIAPRRLGNAHPNV 259
Query: 447 VPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
VP+Q F T+NG++ + G+D Q++ +C MN LA D R+ T
Sbjct: 260 VPYQTFATNNGHLILACGNDGQFRALCGAMNRPELATDVRFAT 302
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 66/141 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C MN LA D R+ T + R NR L + + ++ +EW+ + P +N
Sbjct: 285 LCGAMNRPELATDVRFATNSARSVNRADLIPLLASLFATRSNDEWITTLEACGVPCGPIN 344
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I+Q F E + V+ ++H G V + S T E PPP LGEHT VL
Sbjct: 345 DIAQAFESEQARHRNAVRHMAHPLAGSAPTVTSPLRLSATPVEYVQPPPLLGEHTAAVLH 404
Query: 121 DLLNYDETTIAKLKEKKILGL 141
DLL + IA L + ++G+
Sbjct: 405 DLLGMEPAQIAGLSQAGVIGV 425
>gi|449303807|gb|EMC99814.1| hypothetical protein BAUCODRAFT_21543 [Baudoinia compniacensis UAMH
10762]
Length = 460
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 146/315 (46%), Positives = 202/315 (64%), Gaps = 22/315 (6%)
Query: 191 NENKISLYENFYSLDLALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQ 250
N N + L N + + + N S PL +RILD +RI+AGPFCT +LAD GA+VIKVEQ
Sbjct: 34 NRNGL-LLRNARNTSTSTTQNNSSGPLRGIRILDFSRILAGPFCTQILADYGADVIKVEQ 92
Query: 251 PVTGDECRKW-------------GPPFLNNTELSTYFTCVNRNKKSVCVDFKTPEGQQII 297
GDE R W GP S YF +NRNK+S+ +D K PE +I+
Sbjct: 93 AGAGDETRTWQGKGEAAHWKPEAGP-------TSFYFAAINRNKRSLTLDLKKPEALEIV 145
Query: 298 KDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIA 357
K L DV+VENFVPG RL +GY L ++N +L+Y SV+G+GS GPY R GYD IA
Sbjct: 146 KKLVANVDVVVENFVPGGAARLGVGYDDLKQLNPRLVYASVSGYGSSGPYAKRAGYDAIA 205
Query: 358 ASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLST 417
A+ GGL+HITG PDG P + G+ D++TGLY HGA++AAL H+ KTG+GQ I +L T
Sbjct: 206 AAEGGLMHITGSPDGGPVRPGLGMTDMSTGLYTHGAILAALWHRDKTGEGQYISASLFET 265
Query: 418 QVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNG-YVTIGTGSDKQYQDMCKVM 476
Q+S+LINVGAN+LN ++GKR+G +H ++VP+ +K +G ++ + +D+Q++ + K +
Sbjct: 266 QLSLLINVGANWLNMAVDGKRFGAAHPSIVPYNTWKCKDGVWLALAANNDRQFKVLAKTI 325
Query: 477 NLQHLALDPRYLTGA 491
L DPR+ T A
Sbjct: 326 GRDELPKDPRFATNA 340
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 78/143 (54%), Gaps = 7/143 (4%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+ K + L DPR+ T A RVE+R + + +A +T++EWL + +G + Y VN
Sbjct: 321 LAKTIGRDELPKDPRFATNAARVEHRPSMDEIFDAVFASRTSDEWLQVLEGSNLAYGPVN 380
Query: 61 SISQVFADEHIQDIK--LVKEI--SHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTD 116
SI + F +H Q + +V+ + G+ K +GPAV +S T+ +R PPALGEHT
Sbjct: 381 SIEKAF--QHPQAVARDMVQPMIWGSTTSGEWKGIGPAVKFSATKASIRDRPPALGEHTA 438
Query: 117 YVLKDLLNYDETTIAKLKEKKIL 139
VL + Y + L+++ ++
Sbjct: 439 EVLAE-AGYSGDEVRSLRDRGVI 460
>gi|426195897|gb|EKV45826.1| hypothetical protein AGABI2DRAFT_193757 [Agaricus bisporus var.
bisporus H97]
Length = 460
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 146/283 (51%), Positives = 196/283 (69%), Gaps = 12/283 (4%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPP---FLNNTELST- 272
L ++ILDLTR++AGP TMLLADLGA+VIKVE+ GD+ R W PP LN S+
Sbjct: 56 LKGLKILDLTRVLAGPTATMLLADLGADVIKVEEVSKGDDTRTWHPPSAPLLNEAPDSSS 115
Query: 273 -------YFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKH 325
YF VNRNK+S+ V+ K PEG +II++L K+ DVLVENFV GKL + LG++
Sbjct: 116 HLPPESAYFLAVNRNKRSITVNLKKPEGIEIIRELVKRSDVLVENFVSGKLASMGLGWED 175
Query: 326 LSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLA 385
+N +LIY S+TG+G GPY+ GYD+I + GL+HITG PD PP KVG+A+ D+A
Sbjct: 176 CQRLNERLIYASITGYGQTGPYRKAAGYDVIIEAEAGLMHITGEPDRPPVKVGVAATDIA 235
Query: 386 TGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHAN 445
TGLY HGA+MA LL + +TGKG IDCNL TQ++ L N+ +NYL AG E R+GT+H +
Sbjct: 236 TGLYTHGAIMAGLLSRQQTGKGLWIDCNLFETQIAGLANIASNYLIAGQEASRYGTAHPS 295
Query: 446 VVPHQVFKTSNGYVTIGTGSDKQYQDMC-KVMNLQHLALDPRY 487
VVP++VF G++ IG G++KQ++ + KV+ LA DP+Y
Sbjct: 296 VVPYEVFPCKEGFLMIGVGNNKQFKLLAEKVLEDPSLATDPKY 338
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 3 KVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSI 62
KV+ LA DP+Y +RV+NR L I K + E WL G+ P+ +N+I
Sbjct: 325 KVLEDPSLATDPKYQDNGVRVQNRVELTHIITDKLKQHDREYWLKKMTGLGIPFGPINNI 384
Query: 63 SQVFADEHIQDI--KLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
Q F EH Q + ++ ++ H + G +K+V PAV+Y+ + VR PPP L EHT+ VL
Sbjct: 385 QQTF--EHPQAVARQVTVDVEHPRAGKVKLVAPAVSYNGQRMPVRRPPPWLSEHTNEVLA 442
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ L Y IA++ + I+
Sbjct: 443 E-LGYSAERIAEMGAEGIV 460
>gi|226349979|ref|YP_002777092.1| putative CoA-transferase [Rhodococcus opacus B4]
gi|226245894|dbj|BAH47161.1| putative CoA-transferase [Rhodococcus opacus B4]
Length = 411
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 134/273 (49%), Positives = 194/273 (71%), Gaps = 2/273 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L +RI+D +R++AGPF TM+L D+GAEVIK+E+P TGD+ R WGPPFL E+S+YF
Sbjct: 8 LKGLRIVDFSRVVAGPFSTMILGDMGAEVIKIERPGTGDDSRGWGPPFLG--EVSSYFMG 65
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
+NRNKKSV +D TPEG I ++L + DV+VE+F PG + RL L Y+ L N LIYC
Sbjct: 66 LNRNKKSVAIDLGTPEGASIARELVRSADVVVESFRPGVMKRLGLDYETLRLTNPSLIYC 125
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
+++ FG GPY +RPGYD++ +++GGL+ +TG P G P KVG+A ID+ TGL+A V++
Sbjct: 126 AISAFGQDGPYHERPGYDLMVSALGGLMSVTGPPQGEPVKVGVAVIDVCTGLHAALGVLS 185
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
AL H+ TG+GQ++D +LLST+++MLIN + YL G K G++HANVVP+Q F T +
Sbjct: 186 ALHHRTVTGEGQRVDVSLLSTELAMLINTASEYLIGGSVAKPQGSAHANVVPYQAFPTED 245
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
G+V +G+ +DK ++ + + DPR++T
Sbjct: 246 GWVLLGSPNDKLFRVLAAALGRPEWGTDPRFIT 278
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 59/110 (53%)
Query: 13 DPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEHIQ 72
DPR++T RV++R+ + +I A T +TT W+ + P A +N + VF D ++
Sbjct: 273 DPRFITNGERVKHRDEIVAQISAITCTQTTAHWVELLSSTGAPVAPINRMDAVFEDPQVR 332
Query: 73 DIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDL 122
+ V E+ H +G K+V A+ S T P V P LGEHT VL +L
Sbjct: 333 HLDQVAEVDHPMFGKHKVVTSALRLSATPPIVGDAAPRLGEHTKQVLTEL 382
>gi|409078987|gb|EKM79349.1| hypothetical protein AGABI1DRAFT_113921 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 460
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 145/283 (51%), Positives = 196/283 (69%), Gaps = 12/283 (4%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPP---FLNNTELST- 272
L ++ILDLTR++AGP TMLLADLGA+VIKVE+ GD+ R W PP LN S+
Sbjct: 56 LKGLKILDLTRVLAGPTATMLLADLGADVIKVEEVSKGDDTRTWHPPSAPLLNEAPDSSS 115
Query: 273 -------YFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKH 325
YF +NRNK+S+ V+ K PEG +II++L K+ DVLVENFV GKL + LG++
Sbjct: 116 HLPPESAYFLAINRNKRSITVNLKKPEGIEIIRELVKRSDVLVENFVSGKLASMGLGWED 175
Query: 326 LSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLA 385
+N +LIY S+TG+G GPY+ GYD+I + GL+HITG PD PP KVG+A+ D+A
Sbjct: 176 CQRLNERLIYASITGYGQTGPYRKAAGYDVIIEAEAGLMHITGEPDRPPVKVGVAATDIA 235
Query: 386 TGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHAN 445
TGLY HGA+MA LL + +TGKG IDCNL TQ++ L N+ +NYL AG E R+GT+H +
Sbjct: 236 TGLYTHGAIMAGLLSRQQTGKGLWIDCNLFETQIAGLANIASNYLIAGQEASRYGTAHPS 295
Query: 446 VVPHQVFKTSNGYVTIGTGSDKQYQDMC-KVMNLQHLALDPRY 487
VVP++VF G++ IG G++KQ++ + KV+ LA DP+Y
Sbjct: 296 VVPYEVFPCKEGFLMIGVGNNKQFKLLAEKVLEDPSLATDPKY 338
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 3 KVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSI 62
KV+ LA DP+Y +RV+NR L I K + E WL G+ P+ +N+I
Sbjct: 325 KVLEDPSLATDPKYQDNGVRVQNRVELTHIITDKLKQHDREYWLKKMTGLGIPFGPINNI 384
Query: 63 SQVFADEHIQDI--KLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
Q F EH Q + ++ ++ H + G +K+V PAV+Y+ + VR PPP L EHT+ VL
Sbjct: 385 QQTF--EHPQAVARQVTVDVEHPRAGKVKLVAPAVSYNGQRMPVRRPPPWLSEHTNEVLA 442
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ L Y IA++ + I+
Sbjct: 443 E-LGYSAERIAEMGARGIV 460
>gi|393212458|gb|EJC97958.1| CAIB/BAIF family enzyme [Fomitiporia mediterranea MF3/22]
Length = 441
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 151/301 (50%), Positives = 204/301 (67%), Gaps = 14/301 (4%)
Query: 209 SSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNT 268
S E + PL VRILDLTR++AGP CTMLLADLGA+VIKVE VTGD+ P ++
Sbjct: 37 SGEGITPPLKGVRILDLTRVLAGPTCTMLLADLGADVIKVES-VTGDDTT----PLSDSA 91
Query: 269 EL--------STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLN 320
STYF +NRNK+S+ VDFKT EG QI+ L + D+LVENF+PG+L L
Sbjct: 92 PAESAHLPSESTYFLAINRNKRSLTVDFKTKEGLQILHKLVSRSDILVENFIPGRLSALG 151
Query: 321 LGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIA 380
LG++ S IN +L+Y S++G+G GPYK PGYD+I + GL+HITG PCKVG+A
Sbjct: 152 LGWEDCSSINPKLVYASISGYGQDGPYKTYPGYDVIIEAEAGLMHITGEAGRQPCKVGVA 211
Query: 381 SIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWG 440
+ D+ATGLYAHGA+MAAL+ K KTGKG IDCNL +Q++ L N+ +NYL AG E R G
Sbjct: 212 ATDIATGLYAHGAIMAALISKEKTGKGVWIDCNLFESQIAGLANIASNYLIAGQEASRHG 271
Query: 441 TSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMC-KVMNLQHLALDPRYLTGALILAMTSH 499
T+H +V P++VF+ +G++ G G++KQ+ + K++ +A DPR+ T A +A +
Sbjct: 272 TAHPSVAPYEVFECKDGFIMFGAGNNKQFAILADKILGNPDIANDPRFATNASRVANRAE 331
Query: 500 L 500
L
Sbjct: 332 L 332
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 73/137 (53%), Gaps = 1/137 (0%)
Query: 3 KVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSI 62
K++ +A DPR+ T A RV NR L + I + + + WL F G P+ +N+I
Sbjct: 306 KILGNPDIANDPRFATNASRVANRAELKELITNVLVTQDRDYWLAKFTGTGIPFGPINNI 365
Query: 63 SQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDL 122
Q F + +V ++ H + G+IK+V PAV Y+ + V PPP L +HT +L++
Sbjct: 366 QQTFEHPQAKARGVVVDVEHPRAGNIKLVAPAVRYNGKRMPVTRPPPWLSQHTSEILEE- 424
Query: 123 LNYDETTIAKLKEKKIL 139
L Y E I L+ K ++
Sbjct: 425 LGYSEKEIHDLRSKHVV 441
>gi|392591955|gb|EIW81282.1| CAIB BAIF family enzyme [Coniophora puteana RWD-64-598 SS2]
Length = 434
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 145/299 (48%), Positives = 198/299 (66%), Gaps = 12/299 (4%)
Query: 215 LPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL---- 270
LPL RILDLTR++AGP TMLLAD+GA+VIKVE+ GD+ R W PP +
Sbjct: 28 LPLKGTRILDLTRVLAGPTATMLLADMGADVIKVEEVSRGDDTRSWSPPSAPTQDFAPKE 87
Query: 271 -------STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGY 323
S YF NRNK+SV V+FK PEG +II DL + DVLVEN++PGKL + LG+
Sbjct: 88 SQHLPPESAYFLAANRNKRSVTVNFKKPEGLKIIHDLVRSSDVLVENYIPGKLATMGLGW 147
Query: 324 KHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASID 383
+ +IN +L+Y S+TG+G GPY GYD+I + GL+HITG PD PP KVG+A D
Sbjct: 148 EDCHKINPRLVYASITGYGQTGPYSQAAGYDVIIEAEAGLMHITGEPDRPPVKVGVAVTD 207
Query: 384 LATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSH 443
+ TGLYAHGA++A+L KTG+G +D NL TQ++ L N+ +NYL AG E R GT+H
Sbjct: 208 IMTGLYAHGAILASLRSVEKTGQGVWVDLNLFETQLAGLANIASNYLVAGKEASRHGTAH 267
Query: 444 ANVVPHQVFKTSNGYVTIGTGSDKQYQDMC-KVMNLQHLALDPRYLTGALILAMTSHLI 501
++VP+QVF ++G++ IG G+D+Q++ +C +V+ LA D R+ T A +A L+
Sbjct: 268 PSIVPYQVFPCADGFLMIGAGNDRQFRLLCERVLEKPGLADDERFSTNAARVAHREELV 326
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 73/140 (52%), Gaps = 2/140 (1%)
Query: 1 MC-KVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQV 59
+C +V+ LA D R+ T A RV +RE L I EK+ E W+ F G+ P+ +
Sbjct: 296 LCERVLEKPGLADDERFSTNAARVAHREELVDVISETLKEKSREYWIERFTGLGVPFGPI 355
Query: 60 NSISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVL 119
N++ Q FA E++H + G IK+V P V Y+ + VR PPP EHT VL
Sbjct: 356 NNVEQTFAHPQAVARGCAVEVNHPRSGKIKMVAPPVRYNGRRMPVRLPPPWHSEHTAEVL 415
Query: 120 KDLLNYDETTIAKLKEKKIL 139
+ L Y E+ A L+ K ++
Sbjct: 416 GE-LGYTESEQAALRAKGVI 434
>gi|163792228|ref|ZP_02186205.1| hypothetical protein BAL199_15313 [alpha proteobacterium BAL199]
gi|159181933|gb|EDP66442.1| hypothetical protein BAL199_15313 [alpha proteobacterium BAL199]
Length = 407
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 143/283 (50%), Positives = 189/283 (66%), Gaps = 5/283 (1%)
Query: 215 LPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTE 269
LPL VRI DLTRI+AGP CT LL DLGA+VIK+E+P GD+ R+WGPP++ +T
Sbjct: 5 LPLDGVRIFDLTRILAGPTCTQLLGDLGADVIKIERPGEGDDTRRWGPPYVKGADGEDTT 64
Query: 270 LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEI 329
S Y+ C NR+K+S+ +D PEG + K L +CDVLVENF G L +L LGY+ L E
Sbjct: 65 ESAYYLCANRSKRSITLDLAKPEGIALAKRLLAECDVLVENFKVGSLAKLGLGYEQLKEE 124
Query: 330 NSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLY 389
+L+YCSVTGFG GPY R GYD +A +GG++ ITG P P KVG+ D+ TG+Y
Sbjct: 125 FPKLVYCSVTGFGQTGPYAKRAGYDFLAQGMGGIMSITGTPGVEPVKVGVGITDVMTGMY 184
Query: 390 AHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPH 449
A A++AAL H+ +TG+GQ +DC LL TQV+ LIN G NYL +G K G +H N+VP+
Sbjct: 185 ASTAILAALRHRDRTGEGQHVDCCLLDTQVAWLINEGTNYLVSGNVPKPLGNAHPNIVPY 244
Query: 450 QVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
+VF TS+G+V + G+D Q+Q C + L DPR+ T L
Sbjct: 245 EVFATSDGHVILACGNDGQFQRWCDIAGAADLKADPRFATNPL 287
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C + L DPR+ T LR+ NR L I ++T+EW+ + + + P VN+
Sbjct: 268 CDIAGAADLKADPRFATNPLRIRNRADLTPRIAEHIATRSTDEWVAVLEAGNVPCGPVNT 327
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGD--IKIVGPAVAYSLTQPEVRTPPPALGEHTDYVL 119
I +VF D ++ + ++ H G+ + ++ V S T R PP LG+HTD VL
Sbjct: 328 IDRVFEDPQVKARGMKVDLPHPLAGEGTVPLIANPVKLSGTPIHYRHAPPTLGQHTDEVL 387
Query: 120 KDLLNYDETTIAKLKEK 136
++L E IA + K
Sbjct: 388 AEVLGMSEAEIAAERAK 404
>gi|402225446|gb|EJU05507.1| CAIB/BAIF family enzyme [Dacryopinax sp. DJM-731 SS1]
Length = 456
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 140/287 (48%), Positives = 197/287 (68%), Gaps = 10/287 (3%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL---------N 266
PL ++I+DLTR++AGP TMLLADLGA+VIK+E+PV GD+ R W PPF +
Sbjct: 52 PLKGIKIVDLTRVLAGPTATMLLADLGADVIKIEEPVKGDDTRAWSPPFAPIPDGSPKPD 111
Query: 267 NTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHL 326
S YF CVNRNK+S ++FK EG +I++ L K D+LVEN++ GKL + LG+
Sbjct: 112 LPPESAYFLCVNRNKRSCGINFKQSEGLEIVRKLIKDADILVENYLTGKLVEMGLGWDEC 171
Query: 327 SEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLAT 386
+IN +LIYCS+TG+G GPY+ GYD++ GL+HITG D PPCKVG+A D++T
Sbjct: 172 HKINPRLIYCSITGYGQTGPYRKAAGYDVVIEGEAGLMHITGERDRPPCKVGVAVTDVST 231
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANV 446
GLYAHGA++AALL + +TGKG IDC+L TQ++ L N+ +NYL A E R GT H ++
Sbjct: 232 GLYAHGAILAALLSRQQTGKGVWIDCSLFDTQIAGLANIASNYLIANKEASRHGTQHPSI 291
Query: 447 VPHQVFKTSNGYVTIGTGSDKQYQDMC-KVMNLQHLALDPRYLTGAL 492
VP+QVF +G+V +G G+D+Q++ + +++ LA D R++T L
Sbjct: 292 VPYQVFPCKDGFVMVGAGNDRQFKILAEQILERPELAEDERFITNGL 338
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 83/139 (59%), Gaps = 5/139 (3%)
Query: 3 KVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSI 62
+++ LA D R++T LRV+NR +LC I ME+T + WL F G+ P+ +N+I
Sbjct: 320 QILERPELAEDERFITNGLRVQNRVVLCGLIADCLMEETRDYWLAKFDGLGVPFGPINNI 379
Query: 63 SQVFADEHIQDIK--LVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
Q F EH Q + + E+ H + G+IK+V PAV Y+ + + PPP L +HT+ +L+
Sbjct: 380 QQTF--EHPQAVARGITAEVEHPRAGNIKLVAPAVHYNGARMPISRPPPYLSQHTEEILQ 437
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ L Y + I +L EKKI+
Sbjct: 438 E-LGYSQQAIQELHEKKII 455
>gi|388853199|emb|CCF53065.1| uncharacterized protein [Ustilago hordei]
Length = 500
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 142/315 (45%), Positives = 202/315 (64%), Gaps = 22/315 (6%)
Query: 209 SSENPSLP--LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN 266
+ + PS+P L +RI+DLTR++AGP+CTMLLADLGA+VIKVE P GD+ R W PPF
Sbjct: 75 TDDGPSIPPPLKGIRIVDLTRVLAGPYCTMLLADLGADVIKVEHPRGGDDTRAWLPPFAQ 134
Query: 267 NT--------------------ELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDV 306
S YF VNR+K+S+ VD K+P G++II DL + DV
Sbjct: 135 PPTGKDAPKPPPGKEDYWASLPPESAYFLSVNRSKRSITVDLKSPAGKKIIHDLVAKADV 194
Query: 307 LVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHI 366
+VEN++PGKL + LGY+ L++I +IY S+TG+G G Y+D+ GYD+I A+ G++HI
Sbjct: 195 VVENYLPGKLASMGLGYEDLNKIKPDIIYASLTGYGQTGSYRDKAGYDVIIAADAGMMHI 254
Query: 367 TGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVG 426
TG D PP K+G+A DL TGLY HGA+MAALL + +TGKG ID +L +Q++ L N+
Sbjct: 255 TGEADRPPVKIGVAMTDLTTGLYVHGAIMAALLGRAQTGKGVHIDASLFESQIASLANIA 314
Query: 427 ANYLNAGIEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPR 486
+NYL AG E R G H ++VP+Q F+ +G + +G G+D Q++ +C ++ L+ D +
Sbjct: 315 SNYLIAGQEAGRHGDKHPSIVPYQTFQAKDGRIMLGAGNDGQFKFLCNLLGKPELSSDSK 374
Query: 487 YLTGALILAMTSHLI 501
Y T A + LI
Sbjct: 375 YATNAARVQHREELI 389
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 78/142 (54%), Gaps = 4/142 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ L+ D +Y T A RV++RE L ++ EKT +EW G P A +
Sbjct: 360 LCNLLGKPELSSDSKYATNAARVQHREELIPLLDKLLKEKTVQEWCDAING-KIPAAPIR 418
Query: 61 SISQVFADEHIQ--DIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
+I F DEH Q D K+V+E+ H + G IKIV PAV Y + VR PP LG+HTD V
Sbjct: 419 NIRGTF-DEHPQSKDRKVVEEVDHPRAGRIKIVAPAVRYGDGKMRVRRAPPVLGQHTDEV 477
Query: 119 LKDLLNYDETTIAKLKEKKILG 140
L L E + KL+E+ +G
Sbjct: 478 LMQELGLSEEEVVKLREEGAIG 499
>gi|365157782|ref|ZP_09354028.1| hypothetical protein HMPREF1015_00188 [Bacillus smithii 7_3_47FAA]
gi|363622681|gb|EHL73833.1| hypothetical protein HMPREF1015_00188 [Bacillus smithii 7_3_47FAA]
Length = 362
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 141/273 (51%), Positives = 187/273 (68%), Gaps = 2/273 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L V++LDLTR++AGP CTM+L DLGAEVIKVE P DE RKWGPPF N +S Y+ C
Sbjct: 5 LDGVKVLDLTRVLAGPLCTMILGDLGAEVIKVEAPGGSDETRKWGPPFQNG--VSAYYLC 62
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
NRNKKS+ V+ K P G++II L ++ DV++ NF G +DRL LGY+ LS N +LIYC
Sbjct: 63 ANRNKKSLTVNLKDPRGKKIIYQLVEKSDVVIHNFKTGTMDRLGLGYEELSRCNPKLIYC 122
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S+TGFG GPYK+ PGYD I + GL+ ITG PP K G+A D+ TGLYA + A
Sbjct: 123 SITGFGETGPYKNLPGYDFIIQGMSGLMSITGDEHTPPFKTGVAITDILTGLYACIGIQA 182
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
ALL K ++G+GQKID +L VS L+NV +NYL + G H N+VP+Q F+T++
Sbjct: 183 ALLEKDRSGRGQKIDLSLYDCAVSSLVNVASNYLMTKKVPPKMGNRHPNIVPYQTFRTAD 242
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
G + I G+D+Q+QD+C V+ ++ L DPR+ T
Sbjct: 243 GEMVIAVGNDRQFQDLCSVLEMRELPSDPRFST 275
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C V+ ++ L DPR+ T RV++R L +E + K+T W+ Q P +
Sbjct: 258 LCSVLEMRELPSDPRFSTNPERVKHRTELIPILEKRFQMKSTAYWMEACQQKKIPCGPIQ 317
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAY 97
+ ++ D + ++ + H G I++VG V Y
Sbjct: 318 KLDEMVCDPQLTAREMFLSMEHPTAGTIQVVGSPVNY 354
>gi|427816567|ref|ZP_18983631.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
gi|410567567|emb|CCN25138.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
Length = 409
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 139/289 (48%), Positives = 197/289 (68%), Gaps = 10/289 (3%)
Query: 210 SENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL---- 265
S+ P+ PL+ +R+LDLTR++AGP+CT LADLGAEVIK+E+P GD+ R WGPP+L
Sbjct: 2 SQRPA-PLTGIRVLDLTRVLAGPWCTQNLADLGAEVIKIERPGAGDDTRAWGPPYLKDAA 60
Query: 266 -NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYK 324
N+T + Y+ NRNK SV +D TP G +++++LA+QCD+LVENF G L + L Y+
Sbjct: 61 GNDTTEAAYYLSANRNKLSVALDIATPRGAELVRELAQQCDILVENFKVGGLRKYGLDYE 120
Query: 325 HLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIA 380
+ IN +LIYCS+TGFG GPY RPGYD + +GGL+ ITG P G P K G+A
Sbjct: 121 SVKAINPRLIYCSITGFGQTGPYASRPGYDFMIQGMGGLMSITGERDDLPGGGPQKAGVA 180
Query: 381 SIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWG 440
DL TG+Y+ ++AAL + ++G GQ ID LL QV+ML N NY+ +G +R G
Sbjct: 181 VTDLMTGMYSTVGILAALHERNRSGLGQHIDMALLDCQVAMLANQNLNYMTSGKAPRRAG 240
Query: 441 TSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+H N+VP+QVF S+G++ + G+D Q+++ C+V++L LA DPR+ T
Sbjct: 241 NAHQNLVPYQVFAVSDGHLIVAVGNDSQFRNYCRVIDLPELADDPRFAT 289
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 65/132 (49%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C+V++L LA DPR+ T RV+NR+ L + + + WL + P +N+
Sbjct: 273 CRVIDLPELADDPRFATNPQRVQNRDELVPLLAERMATGERDAWLAALESAGVPAGPINT 332
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
+ QVF D + ++ +E+ H G + + +S + E R PP LGEHT VL +
Sbjct: 333 LDQVFEDPQVVARQIRRELPHPSAGTVPTASSPLRFSDSPVEYRRAPPLLGEHTRQVLSE 392
Query: 122 LLNYDETTIAKL 133
L ET I L
Sbjct: 393 RLGLSETEIQAL 404
>gi|71006889|ref|XP_758070.1| hypothetical protein UM01923.1 [Ustilago maydis 521]
gi|46097144|gb|EAK82377.1| hypothetical protein UM01923.1 [Ustilago maydis 521]
Length = 496
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 143/317 (45%), Positives = 203/317 (64%), Gaps = 22/317 (6%)
Query: 207 ALSSENPSLP--LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPF 264
A + E PS+P L +RI+DLTR++AGP+CTMLLADLGA+VIKVE P GD+ R W PPF
Sbjct: 69 ASAEERPSIPPPLKGIRIVDLTRVLAGPYCTMLLADLGADVIKVEHPKGGDDTRAWLPPF 128
Query: 265 LNNT--------------------ELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQC 304
S YF VNR+K+S+ VD K+ G++II DL +
Sbjct: 129 AKPPTGKHAPKAPTGKEDYWASLPPESAYFLSVNRSKRSITVDLKSKAGKKIIYDLVAKA 188
Query: 305 DVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLL 364
DV+VEN++PGKL + LGY+ L ++ +IY S+TG+G G Y+D+ GYD+I A+ G++
Sbjct: 189 DVVVENYLPGKLASMGLGYEDLKKVKPDIIYASLTGYGQTGSYRDKAGYDVIIAADAGMM 248
Query: 365 HITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLIN 424
HITG D PP K+G+A DL TGLY HGA+MAALL + +TGKG ID +L +Q++ L N
Sbjct: 249 HITGEADRPPVKIGVAMTDLTTGLYVHGAIMAALLGRAQTGKGVHIDASLFESQIASLAN 308
Query: 425 VGANYLNAGIEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALD 484
+ +NYL AG E R G H ++VP+Q F+ +G + +G G+D Q++ +C ++ L++D
Sbjct: 309 IASNYLIAGQEAGRHGDKHPSIVPYQTFQAKDGRIMLGAGNDGQFRFLCNLLERPELSMD 368
Query: 485 PRYLTGALILAMTSHLI 501
+Y T A +A LI
Sbjct: 369 EKYATNAARVAHRDTLI 385
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 79/142 (55%), Gaps = 4/142 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ L++D +Y T A RV +R+ L ++ +KT +EW + G P A +
Sbjct: 356 LCNLLERPELSMDEKYATNAARVAHRDTLIPLLDELLQKKTVQEWCDLING-KIPAAPIR 414
Query: 61 SISQVFADEHIQ--DIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
+I F DEH Q D K+V E+ H + G IKIV PAV Y + ++ PPP LG+HTD +
Sbjct: 415 NIKGTF-DEHPQSKDRKVVAEVEHPRAGKIKIVAPAVRYGNGKMKITRPPPVLGQHTDEI 473
Query: 119 LKDLLNYDETTIAKLKEKKILG 140
L L E +A+L++ +G
Sbjct: 474 LTQELGMSEDEVAELRKAGSIG 495
>gi|33603556|ref|NP_891116.1| hypothetical protein BB4584 [Bordetella bronchiseptica RB50]
gi|410422033|ref|YP_006902482.1| hypothetical protein BN115_4260 [Bordetella bronchiseptica MO149]
gi|412341120|ref|YP_006969875.1| hypothetical protein BN112_3839 [Bordetella bronchiseptica 253]
gi|427822650|ref|ZP_18989712.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
gi|33577681|emb|CAE34946.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
gi|408449328|emb|CCJ61016.1| conserved hypothetical protein [Bordetella bronchiseptica MO149]
gi|408770954|emb|CCJ55753.1| conserved hypothetical protein [Bordetella bronchiseptica 253]
gi|410587915|emb|CCN02964.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
Length = 409
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 139/289 (48%), Positives = 197/289 (68%), Gaps = 10/289 (3%)
Query: 210 SENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL---- 265
S+ P+ PL+ +R+LDLTR++AGP+CT LADLGAEVIK+E+P GD+ R WGPP+L
Sbjct: 2 SQRPA-PLTGIRVLDLTRVLAGPWCTQNLADLGAEVIKIERPGAGDDTRAWGPPYLKDAA 60
Query: 266 -NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYK 324
N+T + Y+ NRNK SV +D TP G +++++LA+QCD+LVENF G L + L Y+
Sbjct: 61 GNDTTEAAYYLSANRNKLSVALDIATPRGAELVRELAQQCDILVENFKVGGLRKYGLDYE 120
Query: 325 HLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIA 380
+ IN +LIYCS+TGFG GPY RPGYD + +GGL+ ITG P G P K G+A
Sbjct: 121 SVKAINPRLIYCSITGFGQTGPYASRPGYDFMIQGMGGLMSITGERDDLPGGGPQKAGVA 180
Query: 381 SIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWG 440
DL TG+Y+ ++AAL + ++G GQ ID LL QV+ML N NY+ +G +R G
Sbjct: 181 VTDLMTGMYSTVGILAALHERNRSGLGQHIDMALLDCQVAMLANQNLNYMTSGKAPRRAG 240
Query: 441 TSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+H N+VP+QVF S+G++ + G+D Q+++ C+V++L LA DPR+ T
Sbjct: 241 NAHQNLVPYQVFAVSDGHLIVAVGNDSQFRNYCRVIDLPELADDPRFAT 289
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 65/132 (49%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C+V++L LA DPR+ T RV+NR+ L + + + WL + P +N+
Sbjct: 273 CRVIDLPELADDPRFATNPQRVQNRDELVPLLAERMATGERDAWLAALESAGVPAGPINT 332
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
+ QVF D + ++ +E+ H G + + +S + E R PP LGEHT VL +
Sbjct: 333 LDQVFEDPQVVARQIRRELPHPSAGTVPTASSPLRFSDSPVEYRRAPPLLGEHTRQVLSE 392
Query: 122 LLNYDETTIAKL 133
L ET I L
Sbjct: 393 RLGLSETEIQAL 404
>gi|427820061|ref|ZP_18987124.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
gi|410571061|emb|CCN19270.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
Length = 409
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 139/289 (48%), Positives = 197/289 (68%), Gaps = 10/289 (3%)
Query: 210 SENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL---- 265
S+ P+ PL+ +R+LDLTR++AGP+CT LADLGAEVIK+E+P GD+ R WGPP+L
Sbjct: 2 SQRPA-PLTGIRVLDLTRVLAGPWCTQNLADLGAEVIKIERPGAGDDTRAWGPPYLKDAA 60
Query: 266 -NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYK 324
N+T + Y+ NRNK SV +D TP G +++++LA+QCD+LVENF G L + L Y+
Sbjct: 61 GNDTTEAAYYLSANRNKLSVALDIATPRGAELVRELAQQCDILVENFKVGGLRKYGLDYE 120
Query: 325 HLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIA 380
+ IN +LIYCS+TGFG GPY RPGYD + +GGL+ ITG P G P K G+A
Sbjct: 121 SVKAINPRLIYCSITGFGQTGPYASRPGYDFMIQGMGGLMSITGERDDLPGGGPQKAGVA 180
Query: 381 SIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWG 440
DL TG+Y+ ++AAL + ++G GQ ID LL QV+ML N NY+ +G +R G
Sbjct: 181 VTDLMTGMYSTVGILAALHERNRSGLGQHIDMALLDCQVAMLANQNLNYMTSGKAPRRAG 240
Query: 441 TSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+H N+VP+QVF S+G++ + G+D Q+++ C+V++L LA DPR+ T
Sbjct: 241 NAHQNLVPYQVFAVSDGHLIVAVGNDSQFRNYCRVIDLPELADDPRFAT 289
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 65/132 (49%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C+V++L LA DPR+ T RV+NR+ L + + + WL + P +N+
Sbjct: 273 CRVIDLPELADDPRFATNPQRVQNRDELVPLLAERMATGERDAWLAALESAGVPAGPINT 332
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
+ QVF D + ++ +E+ H G + + +S + E R PP LGEHT VL +
Sbjct: 333 LDQVFEDPQVVARQIRRELPHPSAGTVPTASSPLRFSDSPVEYRRVPPLLGEHTRQVLSE 392
Query: 122 LLNYDETTIAKL 133
L ET I L
Sbjct: 393 RLGLSETEIQAL 404
>gi|357974267|ref|ZP_09138238.1| L-carnitine dehydratase/bile acid-inducible protein F [Sphingomonas
sp. KC8]
Length = 409
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 137/283 (48%), Positives = 193/283 (68%), Gaps = 5/283 (1%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-NNTELST 272
S PL +++LDL+R++AGP+ T +L DLGA+V KVEQP GD+ R+WGPPFL + + S
Sbjct: 4 SGPLKGLKVLDLSRVLAGPWSTQILGDLGADVTKVEQPGQGDDTRRWGPPFLEDGSRDSA 63
Query: 273 YFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQ 332
Y+ C NRNK+S+ +D PEG II+ LA + D+LVENF G L + L + L+ +N +
Sbjct: 64 YYLCANRNKRSIAIDLAHPEGAAIIRKLAVEADILVENFRVGGLAKYGLDFASLTLLNPR 123
Query: 333 LIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATGL 388
LIYCS+TGFG GPY+DR GYD + + GL+ +TG PD G P KVGI DL TGL
Sbjct: 124 LIYCSITGFGQDGPYRDRGGYDFLIQGMSGLMSVTGSPDDEPGGGPMKVGIPISDLVTGL 183
Query: 389 YAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVP 448
YA +++AAL H+++TG+GQ IDC LL TQVS+L N +NY+N G+ +R G H N VP
Sbjct: 184 YATTSILAALEHRHRTGRGQHIDCALLDTQVSLLANQASNYMNGGLVPRRLGNEHPNTVP 243
Query: 449 HQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
+Q F ++G + + G+D+Q++ C ++ L LA DPR++ A
Sbjct: 244 YQDFACADGDILVALGNDRQFRAFCTLIGLADLASDPRFIDNA 286
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 60/133 (45%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C ++ L LA DPR++ A R +NR L + + + + + P +VN
Sbjct: 267 FCTLIGLADLASDPRFIDNAGRNQNRSALQDAMRPAIARWQSADLIAAMEATKLPGGKVN 326
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I ++ AD I L++ + ++ ++G S T + R PP GE T VL+
Sbjct: 327 QIPEILADPQIAARGLIRRMKRSDGTEVHVLGFPAKLSETPADYRHAPPRSGEDTAAVLR 386
Query: 121 DLLNYDETTIAKL 133
L +T IA+L
Sbjct: 387 ARLGLSDTEIARL 399
>gi|410474635|ref|YP_006897916.1| hypothetical protein BN117_4184 [Bordetella parapertussis Bpp5]
gi|408444745|emb|CCJ51517.1| conserved hypothetical protein [Bordetella parapertussis Bpp5]
Length = 409
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 139/289 (48%), Positives = 197/289 (68%), Gaps = 10/289 (3%)
Query: 210 SENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL---- 265
S+ P+ PL+ +R+LDLTR++AGP+CT LADLGAEVIK+E+P GD+ R WGPP+L
Sbjct: 2 SQRPA-PLTGIRVLDLTRVLAGPWCTQNLADLGAEVIKIERPGAGDDTRAWGPPYLKDAA 60
Query: 266 -NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYK 324
N+T + Y+ NRNK SV +D TP G +++++LA+QCD+LVENF G L + L Y+
Sbjct: 61 GNDTTEAAYYLSANRNKLSVALDIATPRGAELVRELAQQCDILVENFKVGGLRKYGLDYE 120
Query: 325 HLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIA 380
+ IN +LIYCS+TGFG GPY RPGYD + +GGL+ ITG P G P K G+A
Sbjct: 121 SVKAINPRLIYCSITGFGQTGPYASRPGYDFMIQGMGGLMSITGERDDLPGGGPQKAGVA 180
Query: 381 SIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWG 440
DL TG+Y+ ++AAL + ++G GQ ID LL QV+ML N NY+ +G +R G
Sbjct: 181 VTDLMTGMYSTVGILAALHERNRSGLGQHIDMALLDCQVAMLANQNLNYMTSGKAPRRAG 240
Query: 441 TSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+H N+VP+QVF S+G++ + G+D Q+++ C+V++L LA DPR+ T
Sbjct: 241 NAHQNLVPYQVFAVSDGHLIVAVGNDSQFRNYCRVIDLPELADDPRFAT 289
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 64/132 (48%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C+V++L LA DPR+ T RV+NR+ L + + + WL + P +N+
Sbjct: 273 CRVIDLPELADDPRFATNPQRVQNRDELVPLLAERMATGERDAWLAALESAGVPAGPINT 332
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
+ QVF D + ++ +E+ H G + + +S + E R PP LGEHT VL +
Sbjct: 333 LDQVFEDPQVVARQIRRELPHPSAGTVPTASSPLRFSDSPVEYRRAPPLLGEHTRQVLSE 392
Query: 122 LLNYDETTIAKL 133
L E I L
Sbjct: 393 RLGLFEAEIQAL 404
>gi|427403106|ref|ZP_18894103.1| hypothetical protein HMPREF9710_03699 [Massilia timonae CCUG 45783]
gi|425718117|gb|EKU81069.1| hypothetical protein HMPREF9710_03699 [Massilia timonae CCUG 45783]
Length = 417
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 144/299 (48%), Positives = 198/299 (66%), Gaps = 12/299 (4%)
Query: 206 LALSSENPS-LP--LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGP 262
+ LS+ PS LP L ++R+LDL+R++AGP+C+ LADLGA+VIK+E+P GD+ R WGP
Sbjct: 1 MTLSTSPPSALPKALGHIRVLDLSRVLAGPWCSQNLADLGADVIKIERPGAGDDTRAWGP 60
Query: 263 PFL-----NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLD 317
P+ N+T+ + Y+ NR K+S+ VD + EGQ ++++L CDV++ENF G L
Sbjct: 61 PYARDAQGNDTQEAAYYLSANRGKRSLTVDIASSEGQALLRELVLHCDVVLENFKVGHLK 120
Query: 318 RLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGP 373
R L Y L I L+YCS+TGFG GPY R GYD + +GGL+ +TG P G
Sbjct: 121 RYGLDYDSLKAIKPDLVYCSITGFGQDGPYAHRAGYDFLIQGMGGLMSVTGERDDLPGGG 180
Query: 374 PCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAG 433
P K G+A DL TG+YA AV+AAL H+ +TG+GQ ID LL TQV+ML NVG+NYLN+G
Sbjct: 181 PQKAGVALTDLMTGMYATVAVLAALTHRDRTGEGQHIDMALLDTQVAMLANVGSNYLNSG 240
Query: 434 IEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
KRWG +HAN+VP+Q F ++G++ + TG+D QYQ + LA DPR+ T L
Sbjct: 241 KPPKRWGNAHANIVPYQTFACADGHIIVATGNDGQYQKFVEAGGRPELAGDPRFATNPL 299
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 69/130 (53%)
Query: 10 LALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADE 69
LA DPR+ T LRV+NR++L + K + W+ + + P +N + +VFA+E
Sbjct: 288 LAGDPRFATNPLRVQNRDVLVPLLAEMVRTKPRDAWIALLEEKGVPCGPINDVGEVFANE 347
Query: 70 HIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETT 129
+Q + ++ H G +K+V + S T PP LG+HT VL+++L E
Sbjct: 348 QVQARAMAIDLPHPSAGQVKLVRNPIRMSATPATSGMAPPLLGQHTTEVLREMLGRSEEE 407
Query: 130 IAKLKEKKIL 139
IA L+E+ ++
Sbjct: 408 IAALRERGVV 417
>gi|393721658|ref|ZP_10341585.1| L-carnitine dehydratase/bile acid-inducible protein F [Sphingomonas
echinoides ATCC 14820]
Length = 406
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 132/277 (47%), Positives = 194/277 (70%), Gaps = 1/277 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-NNTELSTYFT 275
L+ +++LDL+R++AGP+ T +L DLGAEV+K+EQP GD+ R+WGPP L +++ S Y+
Sbjct: 10 LAGIKVLDLSRVLAGPWATQMLGDLGAEVLKIEQPGQGDDTRRWGPPALADDSGDSAYYL 69
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
C NRNK+S+ +D PEG +I+ LA + DV+VENF G L + L Y LS IN +L+Y
Sbjct: 70 CANRNKRSLAIDLAQPEGADLIRRLAAESDVVVENFRVGGLAKYGLDYAALSAINPRLVY 129
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TGFG GPY D+ GYD + ++GGL+ +TG DGPP KVG+ +DL TG YA A++
Sbjct: 130 CSITGFGQDGPYCDKGGYDFLIQAMGGLMSVTGEADGPPMKVGVPIVDLFTGTYATVAIL 189
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
AAL H+ TG+GQ +DC LL TQ++M+ N +NYLN G R G H N+VP++ + T+
Sbjct: 190 AALRHRDATGQGQHVDCALLDTQLAMMSNQASNYLNGGAVPVRMGNDHPNIVPYRDYATA 249
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
+G + + G+D+Q++D +V+ L+ L DPR+ + AL
Sbjct: 250 DGEIVVALGNDRQFRDFLRVLGLEGLGDDPRFASVAL 286
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 58/137 (42%)
Query: 3 KVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSI 62
+V+ L+ L DPR+ + ALR NR L + +++ + + P +VN +
Sbjct: 268 RVLGLEGLGDDPRFASVALRSANRAALHAYLAPAVARWRSDDLIAAMEAAKLPAGKVNGL 327
Query: 63 SQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDL 122
++ AD H+ V+ ++ + +K+V S T PP G T L +
Sbjct: 328 PEILADVHVAHRATVQPMARQDGTPLKVVAFPAKLSATPARYDRAPPCAGADTRAALGET 387
Query: 123 LNYDETTIAKLKEKKIL 139
L E + +L ++
Sbjct: 388 LGLSEEALDQLAASGVI 404
>gi|170089155|ref|XP_001875800.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649060|gb|EDR13302.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 443
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 144/275 (52%), Positives = 193/275 (70%), Gaps = 7/275 (2%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL V+ILDLTR++AGP TMLLADLGA+VIKVE+ GD+ PP S YF
Sbjct: 44 PLKGVKILDLTRVLAGPTATMLLADLGADVIKVEEVTRGDDTPSHQPP------ESAYFL 97
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
NRNK+S+ V+FKTPEG I+ L ++ D+LVENFV GKL + LG++ IN +LIY
Sbjct: 98 SANRNKRSMTVNFKTPEGLAIVHKLVERADILVENFVSGKLASMGLGWEDCKRINERLIY 157
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
S+TG+G GPY+D GYD+I GL+HITG PD PPCKVG+A+ D+ATGLYAHGA+M
Sbjct: 158 ASITGYGQTGPYRDAAGYDVIIEGEAGLMHITGEPDRPPCKVGVAATDIATGLYAHGAIM 217
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
A L+ + +TGKG IDCNL TQ++ L N+ +NYL AG E R GT+H ++VP+QVF
Sbjct: 218 AGLISRQQTGKGVWIDCNLFETQIAGLANIASNYLIAGQEASRHGTAHPSIVPYQVFPCR 277
Query: 456 NGYVTIGTGSDKQYQDMCK-VMNLQHLALDPRYLT 489
+G++ IG G++KQ++ + + V+ LA DP++ T
Sbjct: 278 DGFLMIGAGNNKQFRILAESVLGNPELANDPKFST 312
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 76/137 (55%), Gaps = 5/137 (3%)
Query: 4 VMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSIS 63
V+ LA DP++ T RVENR L K I M++ + WL F+G+ P+ +N+I
Sbjct: 298 VLGNPELANDPKFSTNDARVENRTELVKIITDVLMQRDRDHWLERFRGLGVPFGPINNIK 357
Query: 64 QVFADEHIQDI--KLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
Q F EH Q I ++ E+ H + G IK+V P V Y+ + VR PPP L EHT VL++
Sbjct: 358 QTF--EHPQAIARQVTVEVDHPRSGKIKLVSPPVTYNGQKMPVRLPPPWLSEHTTEVLEE 415
Query: 122 LLNYDETTIAKLKEKKI 138
L Y I L+E+ I
Sbjct: 416 -LGYCRNEIESLRERSI 431
>gi|427430665|ref|ZP_18920427.1| L-carnitine dehydratase/bile acid-inducible protein F
[Caenispirillum salinarum AK4]
gi|425878634|gb|EKV27348.1| L-carnitine dehydratase/bile acid-inducible protein F
[Caenispirillum salinarum AK4]
Length = 406
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 138/287 (48%), Positives = 191/287 (66%), Gaps = 9/287 (3%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNT 268
S PLS+VR+LDL+R++AGP+ +LAD+GA+VIKVE+P GD+ R WGPP+L N+T
Sbjct: 2 SGPLSHVRVLDLSRVLAGPWAGQMLADMGADVIKVERPGKGDDTRGWGPPYLKDEAGNDT 61
Query: 269 ELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSE 328
+ Y+ NR K+SV +DF PEGQ +++++A + DV++ENF G L + L Y L
Sbjct: 62 SEAAYYLSANRGKRSVTIDFTQPEGQALVREMAAKADVVIENFKVGGLKKYGLDYDSLKA 121
Query: 329 INSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPP----CKVGIASIDL 384
+N L+YCS+TGFG GPY R GYD + +GGL+ +TG PDG P KVG+A D+
Sbjct: 122 VNPGLVYCSITGFGQDGPYAHRAGYDFMIQGMGGLMSLTGAPDGAPGGEPMKVGVAITDI 181
Query: 385 ATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHA 444
TG+YA A+ AAL+HK +TG+GQ ID LL QV+ L N NYL +G+ KR G SH
Sbjct: 182 FTGMYATSAIQAALIHKERTGEGQHIDMALLDVQVATLANQAMNYLASGVAPKRLGNSHP 241
Query: 445 NVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
N+VP+Q F T++GY+ + G+D Q+ CKV L +A D R+ T A
Sbjct: 242 NIVPYQAFPTADGYIILAVGNDAQFARFCKVAGLDAIAADARFATNA 288
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 69/139 (49%), Gaps = 1/139 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
CKV L +A D R+ T A RV +RE L +I +T+ +WL + P +N
Sbjct: 269 FCKVAGLDAIAADARFATNAGRVRHREDLVPQIAEVIRTRTSGDWLSALEAEGVPCGPIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ QVFAD + + + H G + +V + +S T + PP LG+ TD VL
Sbjct: 329 TLDQVFADPQVVHRGMKVSVPHPLAGHVDLVASPMRFSGTPVDYDRAPPTLGQDTDAVL- 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
D L DE A L+EK I+
Sbjct: 388 DALGVDEARRAGLREKGII 406
>gi|403419425|emb|CCM06125.1| predicted protein [Fibroporia radiculosa]
Length = 427
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 149/302 (49%), Positives = 202/302 (66%), Gaps = 16/302 (5%)
Query: 204 LDLALSSENPSL----PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRK 259
L A S+ +PS PL ++ILDLTR++AGP TMLLADLGA+VIKVE+ GD+ R
Sbjct: 6 LRRAYSAASPSSGISPPLRGIKILDLTRVLAGPTATMLLADLGADVIKVEEVSRGDDTRS 65
Query: 260 WGPPF--------LNNTEL---STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLV 308
W PP + + L S YF VNRNK+S+ V+FK PEG I+ L + DVLV
Sbjct: 66 WHPPSAPASPTAPVETSHLPPESAYFLAVNRNKRSLTVNFKRPEGLAILHKLICRSDVLV 125
Query: 309 ENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITG 368
EN++PGKL L LG++ +IN +LIY S+TG+G GPY GYD++ GL+HITG
Sbjct: 126 ENYIPGKLATLGLGWEDCQKINPRLIYTSITGYGQTGPYSQAAGYDVVIEGEAGLMHITG 185
Query: 369 HPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGAN 428
PDGPPCKVG+A D+ATGLYAHGA+MAA+L + TGKG IDCNL +Q++ L N+ +N
Sbjct: 186 EPDGPPCKVGVAVTDIATGLYAHGAIMAAILSRQHTGKGVWIDCNLFESQLAGLANIASN 245
Query: 429 YLNAGIEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCK-VMNLQHLALDPRY 487
YL A R GT+H ++VP+QVF +G++ IG G+DKQ+ + + +++ LA+D R+
Sbjct: 246 YLIAKQSASRHGTAHPSIVPYQVFPCQDGFIMIGAGNDKQFHILAEHILDQPELAVDLRF 305
Query: 488 LT 489
T
Sbjct: 306 ST 307
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 80/138 (57%), Gaps = 5/138 (3%)
Query: 4 VMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSIS 63
+++ LA+D R+ T RV+NR+L+ K I K + TT WL F G+ P+ +N+I
Sbjct: 293 ILDQPELAVDLRFSTNEARVKNRDLIIKVITDKLQQNTTMYWLNKFSGLGIPFGPINNIE 352
Query: 64 QVFADEHIQDI--KLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
Q F +H Q I +++ ++ H + G I+IV P V Y+ + + PPP L +HT VL++
Sbjct: 353 QTF--KHPQTIAREMIIDVEHSRAGKIQIVAPPVTYNGKRMPILRPPPFLSQHTYEVLEE 410
Query: 122 LLNYDETTIAKLKEKKIL 139
L Y I+ L+E +I+
Sbjct: 411 -LGYSLAEISNLREHEII 427
>gi|365856625|ref|ZP_09396638.1| III protein, CoA-transferase family [Acetobacteraceae bacterium
AT-5844]
gi|363717685|gb|EHM01049.1| III protein, CoA-transferase family [Acetobacteraceae bacterium
AT-5844]
Length = 400
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 140/279 (50%), Positives = 182/279 (65%)
Query: 213 PSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELST 272
P+ PL +R++DLTR++AGP CT +L DLGAEVIK+E+P GD+ R + PP++ NT S
Sbjct: 4 PTGPLKGLRVVDLTRVLAGPTCTQMLGDLGAEVIKIERPEAGDDTRGFAPPYMPNTRESA 63
Query: 273 YFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQ 332
YF VNRNKKSV +D PEGQ I+ L + D+LVENF G L + L Y+ L +
Sbjct: 64 YFVGVNRNKKSVTIDIAKPEGQAIVHKLLENADILVENFKTGALAKYGLSYEDLKQKYPG 123
Query: 333 LIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHG 392
LIYCS+TGFG GPY RPGYD + ++GG++ +TG PDG P KVGI DL GLY
Sbjct: 124 LIYCSITGFGQTGPYAPRPGYDALIQAMGGVMSLTGEPDGEPQKVGIPVADLFAGLYGTI 183
Query: 393 AVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVF 452
++AAL HK TG+GQ+ID +L T V+ L N G NYL G R G H N+VP+QVF
Sbjct: 184 GILAALRHKQATGEGQQIDIGMLDTHVAWLANQGMNYLATGQNPPRLGNQHPNIVPYQVF 243
Query: 453 KTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
TS+GY+ + G+D ++ CK L+HL D RY T A
Sbjct: 244 PTSDGYMVLSIGNDPTFERFCKNFGLEHLLADERYATNA 282
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 77/139 (55%), Gaps = 1/139 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
CK L+HL D RY T A RV NR L+ + + A T TT+EW+ + + +N
Sbjct: 263 FCKNFGLEHLLADERYATNAARVGNRALVTETLTAVTKTMTTDEWISKLEALKIGCGPIN 322
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ +VFAD H+Q ++ ++ H ++ +V V S T P+ R+ P LG+HTD VL
Sbjct: 323 TLDRVFADPHVQARNMLVKMQHASGEEVTVVANPVKLSATPPDYRSAAPVLGQHTDEVLA 382
Query: 121 DLLNYDETTIAKLKEKKIL 139
+D IA+L++ KI+
Sbjct: 383 S-AGFDAAAIAQLRDSKIV 400
>gi|298249620|ref|ZP_06973424.1| L-carnitine dehydratase/bile acid-inducible protein F
[Ktedonobacter racemifer DSM 44963]
gi|297547624|gb|EFH81491.1| L-carnitine dehydratase/bile acid-inducible protein F
[Ktedonobacter racemifer DSM 44963]
Length = 387
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 129/275 (46%), Positives = 192/275 (69%), Gaps = 2/275 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
LS +R++D TR++AGP+CTMLL DLGAE+IK+EQP GD+ R WGPPF+ S YF
Sbjct: 4 LSGIRVVDFTRVVAGPYCTMLLGDLGAEIIKIEQPGKGDDTRSWGPPFVGGE--SAYFLS 61
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
VNRNKKSVC+D + +++ L + DV++ENF G ++R LGY+ E + +LIYC
Sbjct: 62 VNRNKKSVCLDLNNEDDLKVVHRLVAESDVMIENFRSGIMERFGLGYEDWRERHPRLIYC 121
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S++G+G GPYKDR GYD+I +++GGL+ ITG P+G P K G+A D+ TGLYA A+
Sbjct: 122 SISGYGRSGPYKDRAGYDVIVSAMGGLMGITGTPEGEPVKTGVALTDVITGLYAFSAIQT 181
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
AL H+ ++G+GQ++D +LLS +++ LIN +NYL +G + G++H ++VP+Q F+ ++
Sbjct: 182 ALYHRERSGQGQRLDVSLLSAELAALINAASNYLVSGEVPQPQGSAHGSIVPYQAFRAAD 241
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
GY+ IG +DK +Q +C+ + A D R+ T A
Sbjct: 242 GYIVIGAANDKLFQKLCQALAHPEWASDERFRTNA 276
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 64/120 (53%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + A D R+ T A RV+NRE L IE ++ W + VN
Sbjct: 257 LCQALAHPEWASDERFRTNAERVKNREALISLIEDALQAESVATWEPLLAQAGIAVGPVN 316
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ QVF D + + V ++H GD+++VGPAV YSLT E+ +PPP LGEHT +++
Sbjct: 317 RMDQVFQDPQVMHSQQVVSLAHPTAGDVRLVGPAVNYSLTPAEITSPPPLLGEHTQEIIQ 376
>gi|239612508|gb|EEQ89495.1| CoA-transferase [Ajellomyces dermatitidis ER-3]
Length = 455
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 147/278 (52%), Positives = 202/278 (72%), Gaps = 6/278 (2%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKW-----GPPFLNNTELS 271
L +ILDLTR++AGPFCT +LAD GA+VIKVEQP GD+ R W G + + +S
Sbjct: 57 LHGFKILDLTRVLAGPFCTQILADYGADVIKVEQPGKGDDTRYWRTEGEGEKWQTDA-IS 115
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF CVNRNK+SV ++ K+ +G++I+ DL K DV+VENFVPGK+D L +GY LS+IN
Sbjct: 116 CYFACVNRNKRSVALNLKSQKGREILLDLVKVLDVVVENFVPGKMDELGIGYDVLSKINP 175
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+I+ S++G+G+ GPY R GYDIIAA+ GGLLHITG DGPP K GI DL TGLY H
Sbjct: 176 AVIHASISGYGAAGPYAQRAGYDIIAAAEGGLLHITGEADGPPTKPGIGLTDLCTGLYMH 235
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
GA+MAAL +++TGKGQK+D +L TQ+S+LINV +++LN G E +RWGT+H ++VP++
Sbjct: 236 GAIMAALQARHRTGKGQKLDGSLFETQLSLLINVASSWLNMGQEAQRWGTAHPSIVPYEG 295
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
FKT + Y+ +G +++Q+ + + M LA D R+LT
Sbjct: 296 FKTKDSYLVLGATNNRQFGVLAERMGRPDLATDERFLT 333
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 76/141 (53%), Gaps = 3/141 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+ + M LA D R+LT RV NR L + KTT+EWL +++ PY +N
Sbjct: 316 LAERMGRPDLATDERFLTNDSRVRNRSELNNILYDLFKTKTTDEWLDVYENSGIPYGPIN 375
Query: 61 SISQVFADEHIQDIKLVKEISHEKY--GDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
S+ +VF ++VK I + G K+VG V +S T+ VR+ PP LGEHTD V
Sbjct: 376 SLERVFTHTQTHAREMVKSIDFDAAVDGIFKVVGFPVKFSNTEASVRSNPPLLGEHTDDV 435
Query: 119 LKDLLNYDETTIAKLKEKKIL 139
LK+ L + +A L+ +K++
Sbjct: 436 LKE-LGLSQEKLADLRREKVI 455
>gi|333979988|ref|YP_004517933.1| formyl-CoA transferase [Desulfotomaculum kuznetsovii DSM 6115]
gi|333823469|gb|AEG16132.1| Formyl-CoA transferase [Desulfotomaculum kuznetsovii DSM 6115]
Length = 400
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 130/278 (46%), Positives = 195/278 (70%), Gaps = 3/278 (1%)
Query: 215 LPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYF 274
LPL V++LD++R++ GPFCTM+L DLGAEVIKVE P GDE R WGPPF+N S YF
Sbjct: 9 LPLEGVKVLDISRVLTGPFCTMILGDLGAEVIKVEMPGVGDETRSWGPPFVNGE--SAYF 66
Query: 275 TCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLI 334
VNRNKKS+ V+ K+P+G++II LAK+ DV++ENF+PG + RL + Y+ + EIN Q+I
Sbjct: 67 LSVNRNKKSITVNMKSPKGREIIYRLAKEADVMIENFLPGTVQRLGVDYERIKEINPQII 126
Query: 335 YCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAV 394
YCS++G+G GPY+D P YD++ GGL+ ITG DG P ++G+A ID+ G+YA +
Sbjct: 127 YCSLSGYGQDGPYRDHPAYDLLMQGEGGLMSITGEKDGEPVRIGVAIIDIGAGMYAVIGI 186
Query: 395 MAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKT 454
++AL+ + +TGKGQ ID +L+ T+VS L + +NY +G + R G+ H ++VP++ F+
Sbjct: 187 LSALMARKETGKGQYIDISLMDTEVSWLTYMASNYFASGKDPIRMGSGHPSIVPYRAFRA 246
Query: 455 SNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
+ Y + G+D +Q C ++L+ + DPR++T +
Sbjct: 247 RDKYFILAVGNDAIWQRFCAALDLKFVD-DPRFVTNEM 283
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 72/134 (53%), Gaps = 2/134 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C ++L+ + DPR++T +RV++R+ L K + ++K W+ + P +N
Sbjct: 264 FCAALDLKFVD-DPRFVTNEMRVKHRDELEKLLAEIFIQKEASYWVNLLHEHKVPCGMIN 322
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+IS+V + + +V E+ HEK G +K++G + +S E R PPP LG+HT +L
Sbjct: 323 AISEVVSHPQVLHRGMVVEMDHEKAGKVKVLGSPLNFSEMSIEYRLPPPLLGQHTHEILS 382
Query: 121 DLLNYDETTIAKLK 134
L Y I +LK
Sbjct: 383 S-LGYTAAEIEELK 395
>gi|33598605|ref|NP_886248.1| hypothetical protein BPP4114 [Bordetella parapertussis 12822]
gi|33574734|emb|CAE39393.1| conserved hypothetical protein [Bordetella parapertussis]
Length = 409
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 138/289 (47%), Positives = 197/289 (68%), Gaps = 10/289 (3%)
Query: 210 SENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL---- 265
S+ P+ PL+ +R+LDLTR++AGP+CT LADLGAEVIK+E+P GD+ R WGPP+L
Sbjct: 2 SQRPA-PLTGIRVLDLTRVLAGPWCTQNLADLGAEVIKIERPGAGDDTRAWGPPYLKDAA 60
Query: 266 -NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYK 324
N+T + Y+ NRNK SV +D TP G +++++LA+QCD+LVENF G L + L Y+
Sbjct: 61 GNDTTEAAYYLSANRNKLSVALDIATPRGAELVRELAQQCDILVENFKVGGLRKYGLDYE 120
Query: 325 HLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIA 380
+ IN +LIYCS+TGFG GPY RPGYD + +GGL+ ITG P G P K G+A
Sbjct: 121 SVKAINPRLIYCSITGFGQTGPYASRPGYDFMIQGMGGLMSITGERDDLPGGGPQKAGVA 180
Query: 381 SIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWG 440
DL TG+Y+ ++AAL + ++G GQ ID LL QV+ML N NY+ +G +R G
Sbjct: 181 VTDLMTGMYSTVGILAALHERNRSGLGQHIDMALLDCQVAMLANQNLNYMTSGKAPRRAG 240
Query: 441 TSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+H N++P+QVF S+G++ + G+D Q+++ C+V++L LA DPR+ T
Sbjct: 241 NAHQNLMPYQVFAVSDGHLIVAVGNDSQFRNYCRVIDLPELADDPRFAT 289
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 65/132 (49%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C+V++L LA DPR+ T RV+NR+ L + + + WL + P +N+
Sbjct: 273 CRVIDLPELADDPRFATNPQRVQNRDELVPLLAERMATGERDAWLAALESAGVPAGPINT 332
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
+ QVF D + ++ +E+ H G + + +S + E R PP LGEHT VL +
Sbjct: 333 LDQVFEDPQVVARQIRRELPHPSAGTVPTASSPLRFSDSPVEYRRAPPLLGEHTRQVLSE 392
Query: 122 LLNYDETTIAKL 133
L ET I L
Sbjct: 393 RLGLSETEIQAL 404
>gi|433463540|ref|ZP_20421090.1| CAIB/BAIF family protein [Halobacillus sp. BAB-2008]
gi|432187375|gb|ELK44670.1| CAIB/BAIF family protein [Halobacillus sp. BAB-2008]
Length = 395
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 137/276 (49%), Positives = 187/276 (67%), Gaps = 2/276 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
LS +R+LDL+R++AGP+C+M+L DLGAEVIKVE P D+ R WGPPF +S Y+ C
Sbjct: 5 LSGIRVLDLSRVLAGPYCSMILGDLGAEVIKVEAPGGSDDTRTWGPPFQQG--VSAYYLC 62
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
NRNKKS+ VD KT EGQ II++LA + DVL+ NF G +++ L Y+ +SE++ LIYC
Sbjct: 63 ANRNKKSLTVDLKTAEGQAIIRELASRSDVLLHNFKTGSMEKFGLDYESMSELHPALIYC 122
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S+TGFG GPY PGYD I ++ GL+ +TG P P K G+A D+ TGLYA + A
Sbjct: 123 SITGFGETGPYSHLPGYDFIIQAMSGLMAVTGTPQSGPQKTGVAISDILTGLYAAIGIQA 182
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
ALL + T KGQKID +LL + VS L+N+G+N+L G E R G HAN+ P+Q+FKT +
Sbjct: 183 ALLERQHTNKGQKIDLSLLDSAVSALVNIGSNFLMTGEEPTRMGNHHANIAPYQMFKTKD 242
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
G V + G+D+Q+ C + L+ DPR+ T A+
Sbjct: 243 GEVIVAVGNDRQFYHFCNAVQKPELSEDPRFCTNAV 278
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 70/139 (50%), Gaps = 1/139 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C + L+ DPR+ T A+RV+NRE L ++ EK T WL I + P V+
Sbjct: 258 FCNAVQKPELSEDPRFCTNAVRVKNREELTAILQKTMEEKKTAYWLKICRDSQIPIGPVH 317
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+++ V DE + + +H G I++VG + S + V PP GEHT +L
Sbjct: 318 TLTDVVQDEQLMARDMFVTANHPAAGPIRMVGSPLKLSGSSFRVNHAPPEPGEHTIEIL- 376
Query: 121 DLLNYDETTIAKLKEKKIL 139
++L Y I + K+K+I+
Sbjct: 377 NMLGYSREIIDEWKKKRII 395
>gi|119614541|gb|EAW94135.1| chromosome 7 open reading frame 10, isoform CRA_a [Homo sapiens]
Length = 296
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 141/238 (59%), Positives = 180/238 (75%), Gaps = 2/238 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL V+ILDLTR++AGPF TM L DLGAEVIKVE+P GD+ R WGPPF+ TE STY+
Sbjct: 47 PLEGVKILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRTWGPPFVG-TE-STYYL 104
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNKKS+ V+ K P+G +IIK+LA CDV VEN+VPGKL + LGY+ + EI +IY
Sbjct: 105 SVNRNKKSIAVNIKDPKGVKIIKELAAVCDVFVENYVPGKLSAMGLGYEDIDEIAPHIIY 164
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+G GP R GYD +A+++ GL+HITG +G P + G+A DLATGLYA+GA+M
Sbjct: 165 CSITGYGQTGPISQRAGYDAVASAVSGLMHITGPENGDPVRPGVAMTDLATGLYAYGAIM 224
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFK 453
A L+ KYKTGKG IDCNLLS+QV+ L ++ ANYL E KRWGT+H ++VP+Q+ K
Sbjct: 225 AGLIQKYKTGKGLFIDCNLLSSQVACLSHIAANYLIGQKEAKRWGTAHGSIVPYQMRK 282
>gi|453083373|gb|EMF11419.1| CAIB/BAIF family enzyme [Mycosphaerella populorum SO2202]
Length = 444
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 141/296 (47%), Positives = 198/296 (66%), Gaps = 10/296 (3%)
Query: 206 LALSSENPS-LPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPF 264
LA + +PS LPL+ +R+LD+TR++AGP+CT +L DLGAEVIK+E P GD+ R WGPP+
Sbjct: 29 LATPASDPSKLPLAGIRVLDMTRVLAGPYCTQILGDLGAEVIKIEHPTRGDDTRAWGPPY 88
Query: 265 LNNTELS--------TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKL 316
TE S YF NRNKKS+ + F++P G +I+ LAK+CDVLVEN++P L
Sbjct: 89 ATYTEQSGKQGAGESAYFLAANRNKKSIGLSFQSPAGVEILHKLAKECDVLVENYLPDAL 148
Query: 317 DRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCK 376
+ N+ Y +S +N +IY S+TG+G GP K R GYD++ + GL+HITGH DGPP K
Sbjct: 149 KKYNMDYASVSAVNPSIIYASITGYGHTGPNKKRAGYDVMVEAEFGLMHITGHRDGPPAK 208
Query: 377 VGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAG-IE 435
VG+A DL TGLY +VMAALL + KTG+GQ ID L Q++ L N+ ++ L +G +
Sbjct: 209 VGVAVTDLTTGLYTSNSVMAALLARAKTGRGQHIDVALADCQIATLANIASSCLISGKPD 268
Query: 436 GKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
RWGT+H ++VP++ FKT +G + IG G+D+ + +C+ + A D RY T A
Sbjct: 269 SGRWGTAHPSIVPYKGFKTKDGDILIGGGNDRLFGILCEKIGHHAWATDARYKTNA 324
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 79/139 (56%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + A D RY T A RV+ R+ L +IEA T KTT+EWL IF+G PYA +N
Sbjct: 305 LCEKIGHHAWATDARYKTNADRVKVRDELEAKIEAVTTTKTTDEWLAIFEGSGMPYAPIN 364
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ + EH + ++ E+ H G IK+V P V +S TQP +R PPP LG+HT VL
Sbjct: 365 DVKKTLELEHTLERNMITEVEHPTCGPIKLVSPPVKFSDTQPSIREPPPTLGQHTTEVLT 424
Query: 121 DLLNYDETTIAKLKEKKIL 139
+LL I LK ++
Sbjct: 425 ELLGMKSDEIKTLKSDGVI 443
>gi|387902000|ref|YP_006332339.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
sp. KJ006]
gi|387576892|gb|AFJ85608.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
sp. KJ006]
Length = 426
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 139/282 (49%), Positives = 188/282 (66%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
LS++R+LDLTR++AGP+C LAD GA+VIKVE+P GD+ R WGPP+L + T +
Sbjct: 24 LSHIRVLDLTRVLAGPWCAQTLADFGADVIKVERPGAGDDTRHWGPPYLKDANGADTAEA 83
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV VD TPEGQQI+++LA Q DV++EN+ G+L + L Y+ L +
Sbjct: 84 AYYLAANRNKRSVTVDIATPEGQQIVRELAAQSDVVLENYKVGQLKKYGLDYESLRAVKP 143
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITG----HPDGPPCKVGIASIDLATG 387
L+YCSVTGFG GPY R GYD I IGG + ITG P G P K G+A DLATG
Sbjct: 144 DLVYCSVTGFGQTGPYAHRAGYDFIVQGIGGFMSITGERDSEPGGGPQKAGVAIADLATG 203
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA AV+AAL H+ +TG+GQ ID LL QV++L N+ N+L +G RWG +H N+V
Sbjct: 204 LYATIAVLAALAHRDRTGEGQHIDMALLDVQVALLANMNTNFLASGKPPVRWGNAHPNIV 263
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+TS+G++ + G+D Q++ + LALD R+ T
Sbjct: 264 PYQTFQTSDGWIIVAVGNDGQFRKFVEAGGRPELALDERFAT 305
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 68/131 (51%)
Query: 9 HLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFAD 68
LALD R+ T RV +R+ L + + +W+ + P +N + +VFA+
Sbjct: 296 ELALDERFATNPSRVRHRDTLVPILAEMVKTRGKTDWIAALEAAGVPCGPINELDEVFAN 355
Query: 69 EHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDET 128
E + + + H D+K+V + S T P+ RT PP LG T+ VL+D+L YD++
Sbjct: 356 EQVVARGMQVSLPHPCGADVKLVRNPIRMSATPPDARTAPPLLGAQTEDVLRDMLGYDDS 415
Query: 129 TIAKLKEKKIL 139
IA L+ K+ +
Sbjct: 416 RIAALRAKQAI 426
>gi|408392317|gb|EKJ71674.1| hypothetical protein FPSE_08120 [Fusarium pseudograminearum CS3096]
Length = 456
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 140/325 (43%), Positives = 208/325 (64%), Gaps = 21/325 (6%)
Query: 182 VDKNSINDENENKISLYENFYSLDLALSSENPSL-PLSNVRILDLTRIIAGPFCTMLLAD 240
+ N + + + ++ + S + AL S + S L+ ++I+DL+R++AGPFCT +LAD
Sbjct: 20 IRANPSSTPSATRAAINYRYNSNNAALQSASSSQGALTGIKIIDLSRVLAGPFCTQILAD 79
Query: 241 LGAEVIKVEQPVTGDECRKW-------------GPPFLNNTELSTYFTCVNRNKKSVCVD 287
GAEV KVE GD+ R W GP +S YF VNRNK+S+ V+
Sbjct: 80 YGAEVTKVEAVGKGDDTRHWIMAGEKASWNESSGP-------ISNYFAAVNRNKRSITVN 132
Query: 288 FKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPY 347
FK EG+Q+I DL K DV+VENF PG ++RL LGY L E+N ++IY ++G+G GPY
Sbjct: 133 FKKAEGRQLILDLIKDADVVVENFKPGTMERLGLGYDVLKELNPRIIYAGLSGYGRTGPY 192
Query: 348 KDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKG 407
+ R GYD IAA+ GLLH+TG +GPP + GI +D++TGL+ HGA+++AL+ + + G G
Sbjct: 193 RTRGGYDPIAAAEAGLLHVTGEKNGPPVRAGIGLVDMSTGLFLHGAILSALIARARDGTG 252
Query: 408 QKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDK 467
Q++D +L TQ+S+L NVG +LN GIE +RWG H ++ P+ FKT + Y+ G +D
Sbjct: 253 QRVDASLFETQLSLLTNVGLAWLNLGIEAERWGCQHPSIAPYDAFKTRDRYLVCGATNDN 312
Query: 468 QYQDMCKVMNLQHLALDPRYLTGAL 492
QY +C ++ ++HL DPR++T L
Sbjct: 313 QYAALCCLLGVEHLVTDPRFITNPL 337
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 80/141 (56%), Gaps = 3/141 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ ++HL DPR++T LRV++RE L + KT +EW+ +F+ P+ +N
Sbjct: 317 LCCLLGVEHLVTDPRFITNPLRVQHREELAALLGPIFASKTIDEWIALFEPSGLPFGPIN 376
Query: 61 SISQVFADEHIQDIKLVKEISHEK--YGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
++ FA +V ++ + G IK++GPAV + ++ +RT PP LG+HT +
Sbjct: 377 NMEATFAHPQTAARDMVIDVPMDAACAGSIKVIGPAVKFGDSKTGLRTGPPRLGQHTVEI 436
Query: 119 LKDLLNYDETTIAKLKEKKIL 139
L++ + D IAK KE I+
Sbjct: 437 LEE-IGMDAEAIAKYKEDGII 456
>gi|381209014|ref|ZP_09916085.1| hypothetical protein LGrbi_03673 [Lentibacillus sp. Grbi]
Length = 386
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 135/273 (49%), Positives = 187/273 (68%), Gaps = 2/273 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L N++ILDL+R++AGP+CTM+L DLGAEVIKVE P DE RKWGPPF N +S Y+ C
Sbjct: 5 LENIKILDLSRVLAGPYCTMILGDLGAEVIKVEAPGGSDETRKWGPPFQNG--VSAYYLC 62
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
NRNK+S+ +D K+PEG IK+L ++ DV++ NF G + RL L Y+ L+ +N L+YC
Sbjct: 63 ANRNKRSLTLDLKSPEGNAAIKELVRESDVIINNFKTGTMQRLGLDYETLARVNPGLVYC 122
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S+TGFG GPYKD PGYD I ++ GL+ ITG + P KVG+A D+ TGLYA +
Sbjct: 123 SITGFGETGPYKDMPGYDFIIQAMSGLMSITGDSESGPQKVGVAITDILTGLYACIGIQG 182
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
ALL + ++GKGQK+D +L + VS L+N+G+NYL AG + G HAN+VP+Q F T +
Sbjct: 183 ALLERAQSGKGQKLDLSLYDSAVSSLVNIGSNYLMAGKKPSALGNQHANIVPYQTFSTKD 242
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
G + I G+D Q++ +C ++ A D R+ T
Sbjct: 243 GEMVIAVGNDNQFKRLCDILERPEYASDERFQT 275
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 55/122 (45%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ A D R+ T RV NR+ L ++ K T W Q S P +
Sbjct: 258 LCDILERPEYASDERFQTNPDRVANRKTLIPLLQEVFSTKRTAYWQGKCQKNSIPCGPIQ 317
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I +V D + + + H GDI+++G + S T R PP GEHTD +L
Sbjct: 318 TIDEVSKDPQLNERDMFINTEHPTAGDIQMIGSPLKLSRTPVSTRHHPPDAGEHTDAILA 377
Query: 121 DL 122
+L
Sbjct: 378 EL 379
>gi|343428627|emb|CBQ72157.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 491
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 143/315 (45%), Positives = 202/315 (64%), Gaps = 22/315 (6%)
Query: 209 SSENPSLP--LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL- 265
S++ PS+P L +RI+DLTR++AGP+CTMLLADLGA+VIKVE P GD+ R W PPF
Sbjct: 66 SADAPSIPPPLKGIRIVDLTRVLAGPYCTMLLADLGADVIKVEHPKGGDDTRAWLPPFAV 125
Query: 266 -------------------NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDV 306
+ S YF VNR+K+S+ VD K+ G++II DL + DV
Sbjct: 126 PPKGKDAFKAPAGKEDYWASLPPESAYFLSVNRSKRSLTVDLKSKAGKKIIYDLVAKADV 185
Query: 307 LVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHI 366
+VEN++PGKL + LGY+ L ++ +IY S+TG+G G Y+D+ GYD+I A+ GL+HI
Sbjct: 186 VVENYLPGKLASMGLGYEDLKKVKPDIIYASLTGYGQTGSYRDKAGYDVIIAADAGLMHI 245
Query: 367 TGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVG 426
TG D PP K+G+A DL TGLY HGA+MAALL + +TGKG ID +L +Q++ L N+
Sbjct: 246 TGEADRPPVKIGVAMTDLTTGLYVHGAIMAALLGRAQTGKGVHIDASLFESQIASLANIA 305
Query: 427 ANYLNAGIEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPR 486
+NYL AG E R G H ++VP+Q F+ +G + +G G+D Q++ +C ++ LA D +
Sbjct: 306 SNYLIAGQEAGRHGDKHPSIVPYQTFQAKDGRIMLGAGNDGQFKFLCNLLGRPELATDAK 365
Query: 487 YLTGALILAMTSHLI 501
Y T A + LI
Sbjct: 366 YATNAARVEHREELI 380
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 77/142 (54%), Gaps = 4/142 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ LA D +Y T A RVE+RE L ++ KT +EW + G P A +
Sbjct: 351 LCNLLGRPELATDAKYATNAARVEHREELIPLLDTLLQSKTVQEWCDLING-KIPAAPIR 409
Query: 61 SISQVFADEHIQ--DIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
+I F DEH Q D K+V E+ H + G IKIV PAV Y + ++ PPP LG+HTD V
Sbjct: 410 NIKGTF-DEHPQSKDRKVVAEVEHPRAGKIKIVAPAVRYGGGKMKITRPPPVLGQHTDEV 468
Query: 119 LKDLLNYDETTIAKLKEKKILG 140
L + L + + +L+ +G
Sbjct: 469 LMEELGMSQAEVDELRRAGSIG 490
>gi|390602958|gb|EIN12350.1| CAIB/BAIF family enzyme [Punctularia strigosozonata HHB-11173 SS5]
Length = 415
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 143/294 (48%), Positives = 195/294 (66%), Gaps = 18/294 (6%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGP---PFLNNTEL-- 270
PL ++I+D+TR++A P TMLLADLGA+VIKVE+ GD+ R W P P N
Sbjct: 4 PLRGIKIVDMTRVLAAPTATMLLADLGADVIKVEEVSRGDDTRSWVPASAPIAPNAPPES 63
Query: 271 ------STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYK 324
S YF VNRNK+S+ +FKTP+G +I+ L DVLVENFV G+L ++ LG+
Sbjct: 64 AHLPAESAYFLSVNRNKRSMTCNFKTPQGLEIMHKLIASADVLVENFVTGRLKKMGLGWD 123
Query: 325 HLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDL 384
+IN +LIY SVTG+G GPY PGYD+I + GL+HITG PDGPPCKVG+A+ D+
Sbjct: 124 QCKKINPRLIYASVTGYGQTGPYATAPGYDVIIEAEAGLMHITGEPDGPPCKVGVAATDI 183
Query: 385 ATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHA 444
ATGLYAHGA+MAAL+ + +TG+G IDCNL +Q++ L+N+ +NYL G+ KR GTSH
Sbjct: 184 ATGLYAHGAIMAALISRQQTGQGVHIDCNLFESQIAGLVNIASNYLIGGLVHKRNGTSHP 243
Query: 445 NVVPHQVFKTSNGYVTIGTGSDK-------QYQDMCKVMNLQHLALDPRYLTGA 491
++VP+QV +G++ IG +DK Q+ + ++ LA DPR+ T A
Sbjct: 244 SIVPYQVLPCKDGFIMIGAANDKQASRALSQFALLANMIGRPDLASDPRFTTNA 297
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 75/139 (53%), Gaps = 1/139 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+ ++ LA DPR+ T A RV++R + + + ME + WL F+G P+ +N
Sbjct: 278 LANMIGRPDLASDPRFTTNAKRVDHRAEVIQAVTEALMEHDRDYWLKRFEGGGVPFGPIN 337
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I++ FA + +V E+ H + G IK+V P V Y+ + +VR PPP L EHT+ VL
Sbjct: 338 DIAETFAHPQAKARDIVVEVEHPRAGKIKLVAPPVMYNGKRMDVRRPPPWLSEHTEEVLT 397
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ L Y I + + KI+
Sbjct: 398 E-LGYTPDDITQFRADKIV 415
>gi|405118556|gb|AFR93330.1| L-carnitine dehydratase/bile acid-inducible protein F [Cryptococcus
neoformans var. grubii H99]
Length = 470
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 137/288 (47%), Positives = 193/288 (67%), Gaps = 12/288 (4%)
Query: 212 NPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL------ 265
N PL+ ++++DLTRI+AGPF TM+L+DLGA+VIK+E P GD+ R W PPF
Sbjct: 43 NDDRPLAGIKVVDLTRILAGPFATMMLSDLGADVIKIESPKNGDDTRSWLPPFAPVPPES 102
Query: 266 ----NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNL 321
+ S YF NRNK+S+ ++ K+ +GQ+IIK L ++ DVLVEN+VPGKL L
Sbjct: 103 YPRPDLPPESAYFLQANRNKRSLTLNLKSVQGQKIIKRLIEKADVLVENYVPGKLKNFGL 162
Query: 322 GYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIAS 381
++ + EIN LIYCS+TG+GS GPY PGYD++ + GL+HITG DG P KVG+A
Sbjct: 163 SWEEVKEINPGLIYCSITGYGSTGPYSQSPGYDVVIEAEAGLMHITGEKDGKPVKVGVAV 222
Query: 382 IDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGT 441
D+ TG YA ++AALL + KTGKG +++C+L +Q++ L N+GANYL AG E RWGT
Sbjct: 223 TDVLTGHYAQSGILAALLKRQKTGKGSRVECSLFESQIASLCNIGANYLIAGEEATRWGT 282
Query: 442 SHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCK--VMNLQHLALDPRY 487
SH ++VP+QVF T + ++ + G+D Q+ +C V+N D R+
Sbjct: 283 SHPSIVPYQVFPTKDSFIMLSAGNDSQFATLCSPAVLNKPDWLNDDRF 330
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 19/149 (12%)
Query: 4 VMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWL--LIFQG---------- 51
V+N D R+ + RVE+R+ + IE EKTTEEW L+ +G
Sbjct: 318 VLNKPDWLNDDRFSSNHKRVEHRDAMIALIEEVLSEKTTEEWCQKLLGKGQVCLSFLSPS 377
Query: 52 ------VSFPYAQVNSISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVR 105
+ P+A +N+I+Q F+ ++V+E+ H + G IK+ PAVAY ++P++
Sbjct: 378 CANAADIRLPFAPINNIAQTFSHPQAIAREVVEEVVHPRAGKIKLAAPAVAYDGSKPKLY 437
Query: 106 TPPPALGEHTDYVLKDLLNYDETTIAKLK 134
PPP LG+HT+ VL + L Y I K+K
Sbjct: 438 RPPPYLGQHTEEVLTE-LGYSSGEIKKMK 465
>gi|134295481|ref|YP_001119216.1| Formyl-CoA transferase [Burkholderia vietnamiensis G4]
gi|134138638|gb|ABO54381.1| Formyl-CoA transferase [Burkholderia vietnamiensis G4]
Length = 406
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 139/282 (49%), Positives = 188/282 (66%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
LS++R+LDLTR++AGP+C LAD GA+VIKVE+P GD+ R WGPP+L + T +
Sbjct: 4 LSHIRVLDLTRVLAGPWCAQTLADFGADVIKVERPGAGDDTRHWGPPYLKDANGADTAEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV VD TPEGQQI+++LA Q DV++EN+ G+L + L Y+ L +
Sbjct: 64 AYYLAANRNKRSVTVDIATPEGQQIVRELAAQSDVVLENYKVGQLKKYGLDYESLRAVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITG----HPDGPPCKVGIASIDLATG 387
L+YCSVTGFG GPY R GYD I IGG + ITG P G P K G+A DLATG
Sbjct: 124 DLVYCSVTGFGQTGPYAHRAGYDFIVQGIGGFMSITGERDSEPGGGPQKAGVAIADLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA AV+AAL H+ +TG+GQ ID LL QV++L N+ N+L +G RWG +H N+V
Sbjct: 184 LYATIAVLAALAHRDRTGEGQHIDMALLDVQVALLANMNTNFLASGKPPVRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+TS+G++ + G+D Q++ + LALD R+ T
Sbjct: 244 PYQTFQTSDGWIIVAVGNDGQFRKFVEAGGRPELALDERFAT 285
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 68/131 (51%)
Query: 9 HLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFAD 68
LALD R+ T RV +R+ L + + +W+ + P +N + +VFA+
Sbjct: 276 ELALDERFATNPSRVRHRDTLVPILAEMVKTRGKTDWIAALEAAGVPCGPINELDEVFAN 335
Query: 69 EHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDET 128
E + + + H D+K+V + S T P+ RT PP LG T+ VL+D+L YD++
Sbjct: 336 EQVVARGMQVSLPHPCGADVKLVRNPIRMSATPPDARTAPPLLGAQTEDVLRDMLGYDDS 395
Query: 129 TIAKLKEKKIL 139
IA L+ K+ +
Sbjct: 396 RIAALRAKQAI 406
>gi|311103625|ref|YP_003976478.1| CoA-transferase [Achromobacter xylosoxidans A8]
gi|310758314|gb|ADP13763.1| CoA-transferase family III family protein 3 [Achromobacter
xylosoxidans A8]
Length = 409
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 138/289 (47%), Positives = 193/289 (66%), Gaps = 10/289 (3%)
Query: 210 SENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL---- 265
S+ P+ PL+ +R+LDLTR++AGP+CT LADLGAEVIK+E+P GD+ R WGPP+L
Sbjct: 2 SQRPA-PLTGIRVLDLTRVLAGPWCTQNLADLGAEVIKIERPGAGDDTRAWGPPYLKDEA 60
Query: 266 -NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYK 324
N+T + Y+ NRNK SV +D +P G +++++LA Q D+LVENF G L + L Y
Sbjct: 61 GNDTTEAAYYLSANRNKLSVALDIASPRGAELVRELALQSDILVENFKVGGLSKYGLDYD 120
Query: 325 HLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIA 380
L E+N +LIYCS+TGFG GPY RPGYD + +GGL+ ITG P G P K G+A
Sbjct: 121 SLKELNPRLIYCSITGFGQTGPYASRPGYDFMIQGMGGLMSITGERDDLPGGGPQKAGVA 180
Query: 381 SIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWG 440
DL TG+Y+ ++AAL + ++G GQ ID LL QVSML N NY+ +G+ KR G
Sbjct: 181 VTDLMTGMYSTVGILAALHERSRSGLGQHIDMALLDCQVSMLANQNLNYMTSGVAPKRAG 240
Query: 441 TSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+H N+VP+QVF S+G++ + G+D Q+++ C + L L+ DPR+ T
Sbjct: 241 NAHQNLVPYQVFAASDGHLIVAVGNDSQFRNYCGAIGLPELSADPRFAT 289
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 64/136 (47%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C + L L+ DPR+ T RV+NR L + + + WL + V P +N+
Sbjct: 273 CGAIGLPELSADPRFATNPQRVKNRAELVPLLTERMATGARDHWLAALEAVGVPAGPINT 332
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
+ QV+ D + + +E+ H G + I + +S + E R PPP LGEHT+ VL +
Sbjct: 333 LDQVYEDPQVLARGMKRELPHPTAGTVPIAASPLKFSDSPVEYRRPPPMLGEHTEQVLSE 392
Query: 122 LLNYDETTIAKLKEKK 137
L I L + +
Sbjct: 393 KLGLSAEEILALAQSR 408
>gi|91781049|ref|YP_556256.1| Alpha-methylacyl-CoA racemase [Burkholderia xenovorans LB400]
gi|91693709|gb|ABE36906.1| Alpha-methylacyl-CoA racemase [Burkholderia xenovorans LB400]
Length = 413
Score = 297 bits (760), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 132/273 (48%), Positives = 194/273 (71%), Gaps = 2/273 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L +R++D TR++AGP+ T +L DLGA+VIK+E+P GD+ R WGPPF+ E+S+YF
Sbjct: 8 LKGLRVIDFTRVVAGPYSTSILGDLGADVIKIERPGIGDDSRGWGPPFVG--EVSSYFLG 65
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
+NRN++SV +D +TPEG +I K L DV+VE+F PG +DRL LGY+ L + N LIYC
Sbjct: 66 LNRNRRSVAIDLQTPEGIEIAKKLIVGADVVVESFRPGVMDRLGLGYEELKKTNPGLIYC 125
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
+++ FG GPY +RPGYD++ +++GGL+ +TG DG P K G+A ID++TGL+A V+A
Sbjct: 126 AISAFGQTGPYHERPGYDLMISALGGLMGVTGSADGEPVKTGVALIDVSTGLHAAIGVLA 185
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
AL H+ TG+GQ++D +LL T++++LINV + YL G K G+ HANV P+Q F T +
Sbjct: 186 ALHHRTLTGEGQRVDASLLGTELAILINVASEYLIGGSIAKPQGSGHANVAPYQAFPTED 245
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
G+V +G+ +DK ++ MC + DPR+LT
Sbjct: 246 GWVLMGSPNDKLFRKMCDSLGKPEWKDDPRFLT 278
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
MC + DPR+LT RV+++ L I A T + T W+ + P A +N
Sbjct: 261 MCDSLGKPEWKDDPRFLTNGDRVKHKPELVGMISAITRTRKTSHWVELLSATGAPVAPIN 320
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ QVF D ++ + V + H YG +V + +S T P V P LG+HT +L+
Sbjct: 321 KMDQVFQDPQVKHLNQVAHVEHPMYGRYPVVTSGLRFSETPPVVGAAAPRLGQHTREILE 380
Query: 121 DLLNYDETTIAKLKEKKIL 139
L E+ + +L E ++
Sbjct: 381 GELGMSESEVGQLVENGVV 399
>gi|311104095|ref|YP_003976948.1| CoA-transferase [Achromobacter xylosoxidans A8]
gi|310758784|gb|ADP14233.1| CoA-transferase family III family protein 4 [Achromobacter
xylosoxidans A8]
Length = 414
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 140/294 (47%), Positives = 192/294 (65%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ +R+LDL+RI+AGP+CT LADLGA+VIK+E+P GD+ R WGPPFL +TE S
Sbjct: 7 LTGIRVLDLSRILAGPWCTQNLADLGADVIKIERPRVGDDTRAWGPPFLKDGDGRDTEES 66
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV D TP+G +I++LA D+LVENF G L + L Y L +IN
Sbjct: 67 AYYLSANRNKRSVEADMATPQGAALIRELAAASDILVENFKVGGLAKYGLDYDSLKQINP 126
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+LIYCSVTGFG GPY PGYD + +GGL+ ITG P G P K G+A D+ TG
Sbjct: 127 RLIYCSVTGFGQDGPYAQHPGYDFMIQGLGGLMSITGERDDLPGGGPQKAGVAVTDIITG 186
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA A++AAL ++ +G GQ +D LL + V+ML N +NY N+G+ +R G +H NVV
Sbjct: 187 MYATVAILAALQERHNSGLGQHLDIALLDSHVAMLANQNSNYFNSGVAPQRAGNAHQNVV 246
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+QVF SNG++ + TG++ QY+ C+ + L DPR+ T + LA L+
Sbjct: 247 PYQVFAASNGHLIVATGNESQYRAYCRAIGAPELGDDPRFATNRMRLANREVLV 300
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 63/135 (46%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C+ + L DPR+ T +R+ NRE+L + + ++W+ + V P +N
Sbjct: 272 CRAIGAPELGDDPRFATNRMRLANREVLVGLLTEIMRQGKRDDWIAKLEAVGVPCGPIND 331
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
I+Q A +L +++ H G + + S + E R PP LGEHT+ VL++
Sbjct: 332 IAQAQAHPQALARQLRRDLPHPAGGMAAVTASPLRLSASPVEYRRAPPLLGEHTEEVLRE 391
Query: 122 LLNYDETTIAKLKEK 136
+L IA + +
Sbjct: 392 VLGKTAEEIAAFRAQ 406
>gi|321249190|ref|XP_003191371.1| acyl CoA transferase [Cryptococcus gattii WM276]
gi|317457838|gb|ADV19584.1| Acyl CoA transferase, putative [Cryptococcus gattii WM276]
Length = 453
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 137/288 (47%), Positives = 194/288 (67%), Gaps = 12/288 (4%)
Query: 212 NPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL------ 265
N PL+ ++++DLTRI+AGPF TM+L+DLGA+VIK+E P GD+ R W PP
Sbjct: 44 NDDRPLAGIKVVDLTRILAGPFATMMLSDLGADVIKIESPKNGDDTRSWLPPSAPVPLED 103
Query: 266 ----NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNL 321
+ S YF NRNK+S+ ++ K+ EGQ+IIK L ++ DVLVEN+VPGKL + L
Sbjct: 104 YPRPDLPPESAYFMQANRNKRSLTLNLKSVEGQKIIKRLIEEADVLVENYVPGKLKKFGL 163
Query: 322 GYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIAS 381
++ + E+N +LIYCS+TG+GS GPY PGYD++ + GL+HITG DG P KVG+A
Sbjct: 164 SWEEVKEMNPRLIYCSITGYGSTGPYSKSPGYDVVIEAEAGLMHITGEKDGKPVKVGVAV 223
Query: 382 IDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGT 441
D+ TG YA ++AALL + KTGKG +I+C+L +Q++ L N+GANYL AG E RWGT
Sbjct: 224 TDVLTGHYAQSGILAALLKRQKTGKGSRIECSLFESQIASLCNIGANYLIAGQEATRWGT 283
Query: 442 SHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCK--VMNLQHLALDPRY 487
SH ++VP+QVF T + ++ + G+D Q+ +C V+N D R+
Sbjct: 284 SHPSIVPYQVFPTKDSFIMLSAGNDSQFAILCSPAVLNKPDWLNDDRF 331
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 75/131 (57%), Gaps = 1/131 (0%)
Query: 4 VMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSIS 63
V+N D R+ RVENR+++ IE EKTTEEW G P+A +N+I+
Sbjct: 319 VLNKPDWLNDDRFSKNHKRVENRDVMISLIEEVLSEKTTEEWCQKLTGKGLPFAPINNIA 378
Query: 64 QVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLL 123
Q F+ ++V+E+ H + G IK+ PAV Y ++P++ PPP LG+HT+ VL + L
Sbjct: 379 QTFSHPQAIAREVVEEVVHPRAGKIKLAAPAVTYDGSKPKLYRPPPYLGQHTEEVLTE-L 437
Query: 124 NYDETTIAKLK 134
Y+ I K++
Sbjct: 438 GYNSDEIKKMQ 448
>gi|372271842|ref|ZP_09507890.1| acyl-CoA transferase/carnitine dehydratase [Marinobacterium
stanieri S30]
Length = 403
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 137/278 (49%), Positives = 186/278 (66%), Gaps = 4/278 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL+ VR+LDL+RI+AGP+C+ LADLGAEVIKVE P GD+ R WGPP+L +T + YF
Sbjct: 4 PLAGVRVLDLSRILAGPWCSQHLADLGAEVIKVEHPKRGDDTRSWGPPYLKDTREAAYFL 63
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
NR K+SV +D PEGQQ+I++LA Q DV++ENF G L R L Y+ L + LIY
Sbjct: 64 SANRGKESVAIDIAHPEGQQLIRELASQVDVVLENFKVGGLARYGLDYESLKAVKPDLIY 123
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATGLYAH 391
CS+TGFG GPY +R GYD + +GGL+ +TG P+ P KVG+A DL TG+YA
Sbjct: 124 CSITGFGQDGPYAERAGYDFLLQGMGGLMSLTGQPESVAGSEPVKVGVAITDLFTGMYAA 183
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A+++ALL + +TG G ID +LL QV +L N NYL GI +R G +H N+VP+QV
Sbjct: 184 TAILSALLQRDRTGDGAWIDLSLLDVQVGVLANQAMNYLTTGISPERMGNAHPNIVPYQV 243
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
F +++G++ + G+D Q+Q C+V + LA D Y T
Sbjct: 244 FPSADGHIILAVGNDTQFQRFCEVAGIPELAGDSDYAT 281
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 71/139 (51%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V + LA D Y T RVENRE L ++ A + + WL + V P +N
Sbjct: 264 FCEVAGIPELAGDSDYATNNSRVENREQLIPQLSACIAKHPSAFWLDELEKVGVPCGPIN 323
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+++QVFAD I + E H + G + +V + ++ T PPALGEHT VL+
Sbjct: 324 NLAQVFADPQICHRGMRIERQHPEAGSVPLVSNPIRFNGHALNAETAPPALGEHTLEVLQ 383
Query: 121 DLLNYDETTIAKLKEKKIL 139
LL ++ + +LK + ++
Sbjct: 384 RLLPNQDSRLDQLKVEGVI 402
>gi|410632334|ref|ZP_11342995.1| CaiB/baiF CoA-transferase family protein [Glaciecola arctica
BSs20135]
gi|410148104|dbj|GAC19862.1| CaiB/baiF CoA-transferase family protein [Glaciecola arctica
BSs20135]
Length = 407
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 141/285 (49%), Positives = 188/285 (65%), Gaps = 9/285 (3%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----T 268
S PLS++R+L+L+RI+AGP+ +LADLGAEVIKVE+P+ GD+ R WGPPFL N T
Sbjct: 2 SSPLSHIRVLELSRILAGPWAGQMLADLGAEVIKVEKPIEGDDTRHWGPPFLQNQQGEAT 61
Query: 269 ELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSE 328
S YF NR K+S+ VD + P+GQ II L CDVL+ENF G L + +L Y LS
Sbjct: 62 TESAYFLSTNRGKRSITVDIRQPQGQAIIHQLIASCDVLIENFKVGSLQKYHLDYASLSA 121
Query: 329 INSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDL 384
IN +LIYCS+TGFG GPY R GYD + +GGL+ +TG PD G P KVG+A D+
Sbjct: 122 INPKLIYCSITGFGQDGPYAQRAGYDFLLQGMGGLMSVTGEPDHLPGGGPQKVGVALTDI 181
Query: 385 ATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHA 444
TG+YA A+ AA++ + K+G GQ+ID LL QV+ L N NYL KR G +H
Sbjct: 182 LTGMYATTAIQAAIIEREKSGLGQQIDLALLDVQVACLANQSMNYLVGHETPKRMGNAHP 241
Query: 445 NVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
N+VP+Q F+T++G++ + G+D Q+ D C+V Q L DPR+ T
Sbjct: 242 NIVPYQTFQTADGFIILTVGNDSQFADFCEVAQCQALLEDPRFTT 286
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 74/139 (53%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V Q L DPR+ T RV NRE++ +++ KT + WL + P +N
Sbjct: 269 FCEVAQCQALLEDPRFTTNQARVNNREIVVEQLTTLIKAKTNDFWLQQLEIKGVPCGPIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I+ VF + I+ K++ E++H + G + V + S T PP LGEHTD VL
Sbjct: 329 DIAHVFDNPQIKHRKMLNELTHPENGKVPTVSNPINLSRTPIVYHQAPPNLGEHTDEVLT 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
+LL+YD I KL++ KI+
Sbjct: 389 ELLDYDTGVIGKLRQSKII 407
>gi|392864602|gb|EAS27498.2| alpha methylacyl-coa racemase [Coccidioides immitis RS]
Length = 459
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 132/277 (47%), Positives = 196/277 (70%), Gaps = 4/277 (1%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWG----PPFLNNTELST 272
L +ILDLTR++AGPFCT +LAD GA+VIKVEQP GDE R W +S
Sbjct: 61 LDGYKILDLTRVLAGPFCTQILADYGADVIKVEQPGKGDETRYWRIHGESEKWKEEGISC 120
Query: 273 YFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQ 332
YF CVNRNK+++ +D K+ +G++I+ DL K+ DV+V+NFVPGK+D+L +GY LS++N
Sbjct: 121 YFACVNRNKRAITLDLKSEKGREILLDLVKKVDVIVDNFVPGKMDQLGIGYDTLSKVNPS 180
Query: 333 LIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHG 392
+I+ S++G+G+ GPY R GYDIIAA+ GGLLH+TG GPP K G+ DL TGL+ HG
Sbjct: 181 IIHASISGYGAGGPYSKRAGYDIIAAAEGGLLHVTGEAQGPPTKPGVGLTDLCTGLFMHG 240
Query: 393 AVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVF 452
A+++AL + +TGKGQK+D +L TQ+++++N+ + +LN G E KRWGT+H ++VP++ F
Sbjct: 241 AIVSALHARNRTGKGQKVDGSLFETQLALMVNIASVWLNMGREAKRWGTAHPSIVPYEAF 300
Query: 453 KTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
T + Y+ +G +++Q+ + + + LA D R+ T
Sbjct: 301 PTKDSYLVMGATNNRQFAILAERLGQPDLARDERFRT 337
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 62/115 (53%), Gaps = 2/115 (1%)
Query: 10 LALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADE 69
LA D R+ T R+ENR L K + +TT+EWL +F+ PY +NSI + F
Sbjct: 329 LARDERFRTNDARIENRVELNKILHELFQTRTTDEWLTVFENSGMPYGPINSIEKAFGHA 388
Query: 70 HIQDIKLVKEISHEKY--GDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDL 122
Q +V + + G+ K+ G V +S ++P VR PP LG+HT+ VL +L
Sbjct: 389 QAQARDMVNTLQMDSAADGEFKVTGFPVKFSESKPSVRINPPLLGQHTEEVLAEL 443
>gi|359785018|ref|ZP_09288179.1| hypothetical protein MOY_04018 [Halomonas sp. GFAJ-1]
gi|359297713|gb|EHK61940.1| hypothetical protein MOY_04018 [Halomonas sp. GFAJ-1]
Length = 404
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 136/290 (46%), Positives = 193/290 (66%), Gaps = 4/290 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL+ +++LD++R++AGP+C +LAD+GAEVIKVE+PV+GD+ R WGPP+L+ + S Y+
Sbjct: 7 PLAGIKVLDISRVLAGPWCGQMLADMGAEVIKVERPVSGDDTRHWGPPWLSGSAESAYYL 66
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
C NR K+SV VD PEGQ +IK LA Q DVL+ENF G L + L Y L IN +LIY
Sbjct: 67 CANRGKRSVTVDMAKPEGQALIKQLAAQSDVLLENFKVGGLKKYGLDYTSLKAINPELIY 126
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATGLYAH 391
CS+TGFG + PY R GYD + ++GG++ +TG PDG P K G+A D+ TGLYA
Sbjct: 127 CSITGFGQESPYAHRAGYDFMIQAMGGIMSLTGRPDGEPGGGPVKSGVAFTDIFTGLYAA 186
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
AV+AAL + TG G ID L+ QV +L N NYL +G +R G SH N+VP+Q
Sbjct: 187 NAVLAALYQRRDTGVGCHIDMALMDVQVGVLANQALNYLTSGQVPQRLGNSHPNIVPYQA 246
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
F T++G++ + G+D+Q++ C+V++L LA D R+ + +A L+
Sbjct: 247 FATADGHMIVAVGNDEQFKRFCQVLSLPELAQDKRFASNGERVAHREQLV 296
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 70/122 (57%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V++L LA D R+ + RV +RE L +EA +++T+EWL F+ V P +N
Sbjct: 267 FCQVLSLPELAQDKRFASNGERVAHREQLVPLLEAALAQRSTDEWLAAFEAVGVPSGPIN 326
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ +VF D H+Q L + + H + G + +V + + T PP+LGEHT+ VL+
Sbjct: 327 TLDRVFDDPHVQARGLKQTLPHSQAGQVDLVANPIRINGQSMSATTAPPSLGEHTERVLE 386
Query: 121 DL 122
++
Sbjct: 387 EI 388
>gi|320031702|gb|EFW13661.1| alpha methylacyl-coa racemase [Coccidioides posadasii str.
Silveira]
Length = 459
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 132/277 (47%), Positives = 196/277 (70%), Gaps = 4/277 (1%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWG----PPFLNNTELST 272
L +ILDLTR++AGPFCT +LAD GA+VIKVEQP GDE R W +S
Sbjct: 61 LDGYKILDLTRVLAGPFCTQILADYGADVIKVEQPGKGDETRYWRIHGESEKWKEEGISC 120
Query: 273 YFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQ 332
YF CVNRNK+++ +D K+ +G++I+ DL K+ DV+V+NFVPGK+D+L +GY LS++N
Sbjct: 121 YFACVNRNKRAITLDLKSEKGREILLDLVKKVDVIVDNFVPGKMDQLGIGYDTLSKVNPS 180
Query: 333 LIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHG 392
+I+ S++G+G+ GPY R GYDIIAA+ GGLLH+TG GPP K G+ DL TGL+ HG
Sbjct: 181 IIHASISGYGAGGPYSKRAGYDIIAAAEGGLLHVTGEAQGPPTKPGVGLTDLCTGLFMHG 240
Query: 393 AVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVF 452
A+++AL + +TGKGQK+D +L TQ+++++N+ + +LN G E KRWGT+H ++VP++ F
Sbjct: 241 AIVSALHARNRTGKGQKVDGSLFETQLALMVNIASVWLNMGREAKRWGTAHPSIVPYEAF 300
Query: 453 KTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
T + Y+ +G +++Q+ + + + LA D R+ T
Sbjct: 301 PTKDSYLVMGATNNRQFAILAERLGQPDLARDERFRT 337
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 63/115 (54%), Gaps = 2/115 (1%)
Query: 10 LALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADE 69
LA D R+ T R+ENR L K + +TT+EWL +F+ PY +NSI + F+
Sbjct: 329 LARDERFRTNDARIENRVELNKILHELFQTRTTDEWLTVFENSGMPYGPINSIEKAFSHA 388
Query: 70 HIQDIKLVKEISHEKY--GDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDL 122
Q +V + + G+ K+ G V +S ++P VR PP LG+HT+ VL +L
Sbjct: 389 QAQARDMVHTLQMDSAADGEFKVTGFPVKFSESKPSVRINPPLLGQHTEEVLAEL 443
>gi|327350527|gb|EGE79384.1| dermal papilla derived protein 13 [Ajellomyces dermatitidis ATCC
18188]
Length = 450
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 142/278 (51%), Positives = 194/278 (69%), Gaps = 11/278 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKW-----GPPFLNNTELS 271
L +ILDLTR++AGPFCT +LAD GA+VIKVEQP GD+ R W G + + +S
Sbjct: 57 LHGFKILDLTRVLAGPFCTQILADYGADVIKVEQPGKGDDTRYWRTEGEGEKWQTDA-IS 115
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF CVNRNK+SV ++ K+ +G++I+ DL K DV+VENFVPGK+D L +GY LS+IN
Sbjct: 116 CYFACVNRNKRSVALNLKSQKGREILLDLVKVSDVVVENFVPGKMDELGIGYDVLSKINP 175
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+I+ S++G PY R GYDII GGLLHITG DGPP K GI DL TGLY H
Sbjct: 176 AVIHASISG-----PYAQRAGYDIIVVVEGGLLHITGEADGPPTKPGIGLTDLCTGLYMH 230
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
GA+MAAL +++TGKGQK+D +L TQ+S+LINV +++LN G E +RWGT+H ++VP++
Sbjct: 231 GAIMAALQARHRTGKGQKLDGSLFETQLSLLINVASSWLNMGQEAQRWGTAHPSIVPYEG 290
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
FKT + Y+ +G +++Q+ + + M L D R+LT
Sbjct: 291 FKTKDSYLVLGATNNRQFGVLAERMGRPDLTTDERFLT 328
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 73/141 (51%), Gaps = 3/141 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+ + M L D R+LT RV NR L + KTT+EWL +++ PY +N
Sbjct: 311 LAERMGRPDLTTDERFLTNDSRVRNRSELNNILYDLFKTKTTDEWLDVYENSGIPYGPIN 370
Query: 61 SISQVFADEHIQDIKLVKEISHEKY--GDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
S+ +VF ++VK I G K+VG V +S T+ VR+ PP L EHTD V
Sbjct: 371 SLERVFTHTQTHAREMVKSIDFNAAVDGIFKVVGFPVKFSNTEASVRSNPPLLEEHTDDV 430
Query: 119 LKDLLNYDETTIAKLKEKKIL 139
LK+ L + +A L+ +K++
Sbjct: 431 LKE-LGLSQEKLADLRREKVI 450
>gi|393775084|ref|ZP_10363398.1| caib baif family protein [Ralstonia sp. PBA]
gi|392717661|gb|EIZ05221.1| caib baif family protein [Ralstonia sp. PBA]
Length = 404
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 141/290 (48%), Positives = 185/290 (63%), Gaps = 5/290 (1%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN---TEL--S 271
L +R+LDL+RI+AGP CT LLADLGA+VIKVE+P GD+ RKWGPP+L + EL S
Sbjct: 12 LDGIRVLDLSRILAGPSCTQLLADLGADVIKVERPGAGDDTRKWGPPYLRDDAGRELAES 71
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ C NRNK+S+ VD +PEGQ +I L DVLVENF G L R L Y L E
Sbjct: 72 AYYACANRNKRSIAVDLTSPEGQAVIHALLADADVLVENFKVGDLARHGLSYAQLHERYP 131
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+L+YCS+TGFG GPY RPGYD +A +GG++ +TG PDG P KV + DL TG+YA
Sbjct: 132 RLVYCSITGFGQTGPYASRPGYDFLAQGMGGIMSLTGTPDGEPQKVAVGITDLMTGMYAT 191
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
++AAL H+ + G+GQ ID LL QV+ L N G +YL AG R G H N+VP++V
Sbjct: 192 VGILAALRHRDQHGEGQHIDVALLDAQVAWLANAGTHYLTAGEAPPRLGNGHPNIVPYEV 251
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
F S+GY + G+D Q+ C + + LA D RY T + + + L+
Sbjct: 252 FPASDGYFILAVGNDAQFARFCSLTGVPELAQDARYATNRMRVQNRTELV 301
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C + + LA D RY T +RV+NR L +++A T+ + W + + P +N
Sbjct: 272 FCSLTGVPELAQDARYATNRMRVQNRTELVPQLKALTVRQPRAYWTEQLERLGIPGGPIN 331
Query: 61 SISQVFADEHI--QDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
+I+ VF D + + +++ G ++++G + S T P R PPP LGEHT+ +
Sbjct: 332 TIADVFNDPQVLARGMRVAMPAPGYAGGKVELIGNPIHMSRTAPSYRRPPPRLGEHTEDI 391
Query: 119 LKDL 122
L L
Sbjct: 392 LNAL 395
>gi|144898056|emb|CAM74920.1| CoA-transferase family III protein [Magnetospirillum
gryphiswaldense MSR-1]
Length = 406
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 135/280 (48%), Positives = 187/280 (66%), Gaps = 5/280 (1%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+++R+LDL+R++AGP+ +LADLGAEVIKVE+P GD+ R WGPPFL +T S
Sbjct: 6 LAHLRVLDLSRVLAGPWAGQMLADLGAEVIKVEKPGQGDDTRAWGPPFLKDAHGRDTRES 65
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NR K+S+ +DF EGQQ+++ LA CDV++ENF G L + L Y L ++
Sbjct: 66 AYYLSANRGKQSLAIDFTQAEGQQLVRQLAADCDVVLENFKAGGLAKYGLDYASLRQVKP 125
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+IYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG+YA
Sbjct: 126 DIIYCSITGFGQDGPYAQRAGYDFLVQGMGGLMSLTGEPEGEPMKVGVALTDIFTGMYAS 185
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
AV+AAL H+ +TG+GQ +D LL QV++L N ANYL G+ KR G +H N+VP+Q
Sbjct: 186 VAVLAALSHRDRTGQGQHVDLALLDVQVAVLANQAANYLVGGMVPKRLGNAHPNIVPYQA 245
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
F TS+G+V + G+D Q+Q C V +A D RY + A
Sbjct: 246 FATSDGHVILAVGNDGQFQKFCAVAGCPEVAADTRYASNA 285
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 63/140 (45%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C V +A D RY + A RV NR+ L + + + W+ + P +N
Sbjct: 266 FCAVAGCPEVAADTRYASNAGRVGNRDTLIPLLREVLRSRPSAVWIETLEAAGVPCGPIN 325
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ QVF + I+ +V + H G + +V + +S T PP LG TD +L
Sbjct: 326 TLDQVFDNPQIKHRGMVAAVDHPLAGSVDLVANPIRFSETPVAYDRAPPVLGADTDVLLS 385
Query: 121 DLLNYDETTIAKLKEKKILG 140
LL D IA L+ K ++G
Sbjct: 386 RLLGLDAAAIADLRAKGVVG 405
>gi|94309775|ref|YP_582985.1| acyl-CoA transferase/carnitine dehydratase [Cupriavidus
metallidurans CH34]
gi|430807958|ref|ZP_19435073.1| acyl-CoA transferase/carnitine dehydratase [Cupriavidus sp. HMR-1]
gi|93353627|gb|ABF07716.1| Acyl-CoA transferase/carnitine dehydratase [Cupriavidus
metallidurans CH34]
gi|429499715|gb|EKZ98121.1| acyl-CoA transferase/carnitine dehydratase [Cupriavidus sp. HMR-1]
Length = 406
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 139/282 (49%), Positives = 186/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDLTR++AGP+C LAD GA+VIK+E+P GD+ R WGPP+L +T +
Sbjct: 4 LSHLRVLDLTRVLAGPWCAQNLADFGADVIKIERPGAGDDTRIWGPPWLKTPEGEDTAEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV D TPEGQQ+++DLA Q DV++EN+ G+L + L Y+ L I
Sbjct: 64 AYYLAANRNKRSVTCDISTPEGQQLVRDLAAQSDVVLENYKVGQLKKYGLDYESLKAIKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
LIYCSVTGFG GPY RPGYD I +GG + ITG P G P K G+A DL TG
Sbjct: 124 DLIYCSVTGFGQTGPYAQRPGYDFIIQGMGGFMSITGERDDLPGGGPQKAGVAISDLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
YA AV+AAL H+ +TG+GQ ID LL QVSML N+ NYL +G+ KRWG +H N+V
Sbjct: 184 QYATIAVLAALAHRDRTGEGQYIDMALLDVQVSMLANMNTNYLASGVPPKRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+ ++G++ + G+D Q++ LA DPR+ T
Sbjct: 244 PYQTFQAADGWLIVAVGNDGQFRKFVTAGGRPELADDPRFAT 285
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 69/131 (52%)
Query: 9 HLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFAD 68
LA DPR+ T RV +R++L + +T E+W+L + S P +N++ +VF +
Sbjct: 276 ELADDPRFATNPQRVAHRDVLVPILAEMVAPRTREQWILDLERASVPCGPINTLDEVFEN 335
Query: 69 EHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDET 128
E + L ++ H G +K+VG + S T E PP LGEHTD VL + L Y
Sbjct: 336 EQVVARGLRVDLPHPSAGTVKLVGSPMKMSATPTEALRHPPLLGEHTDVVLGETLGYSAE 395
Query: 129 TIAKLKEKKIL 139
IA L+ K ++
Sbjct: 396 HIAALRNKGVV 406
>gi|389744653|gb|EIM85835.1| CAIB/BAIF family enzyme [Stereum hirsutum FP-91666 SS1]
Length = 428
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 142/284 (50%), Positives = 192/284 (67%), Gaps = 12/284 (4%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL--------NN 267
PL N+RILDLTR++AGP TMLLADLGA+VIKVE+ GD+ R W PP
Sbjct: 38 PLQNIRILDLTRVLAGPTATMLLADLGADVIKVEEVQRGDDTRSWSPPAAPLSPDAPEQA 97
Query: 268 TEL---STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYK 324
+ L S YF NRNK+S+ ++FK EG +II L ++ DVLVEN++PGKL + LGY
Sbjct: 98 SHLPPESAYFLATNRNKRSIGINFKKQEGLRIIHKLIEKSDVLVENYIPGKLASMGLGYD 157
Query: 325 HLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDL 384
+IN +LIY S+TG+G GPY+ GYD++ GL+HITG PD PP KVG+A D+
Sbjct: 158 DCRKINDKLIYTSITGYGQTGPYRKAAGYDVVIEGEAGLMHITGEPDRPPSKVGVAVTDI 217
Query: 385 ATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHA 444
ATGLYAHGA+MAALL + +TG G IDCNL +QV+ L N+ +NYL G + R GT+H
Sbjct: 218 ATGLYAHGAIMAALLSRQQTGCGVWIDCNLFESQVAGLANIASNYLITGAQAGRHGTAHP 277
Query: 445 NVVPHQVFKTSNGYVTIGTGSDKQYQDMC-KVMNLQHLALDPRY 487
++VP+QVF +GY+ IG G+++Q+ + K++ L+ DPR+
Sbjct: 278 SIVPYQVFPCKDGYLMIGAGNERQFAILADKILGRPELSSDPRF 321
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 65/116 (56%)
Query: 3 KVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSI 62
K++ L+ DPR+ + RV NR+ L I M++T + WL F G+ P+ +N+I
Sbjct: 308 KILGRPELSSDPRFSSNTARVMNRDALIVIISKTLMKQTRDHWLQCFSGLGVPFGPINNI 367
Query: 63 SQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
Q F + LV E+ H + G IK+VGPAV+Y+ + V PPP L +HTD V
Sbjct: 368 EQTFEHPQAKARNLVVEVEHPRAGRIKMVGPAVSYNGKRMSVNRPPPWLAQHTDEV 423
>gi|421486322|ref|ZP_15933868.1| CoA-transferase [Achromobacter piechaudii HLE]
gi|400195379|gb|EJO28369.1| CoA-transferase [Achromobacter piechaudii HLE]
Length = 409
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 137/289 (47%), Positives = 193/289 (66%), Gaps = 10/289 (3%)
Query: 210 SENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL---- 265
S+ P+ PL+ +R+LDLTR++AGP+CT LADLGAEVIK+E+P GD+ R WGPP+L
Sbjct: 2 SQRPA-PLTGIRVLDLTRVLAGPWCTQNLADLGAEVIKIERPGAGDDTRAWGPPYLKDEA 60
Query: 266 -NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYK 324
N+T + Y+ NRNK SV +D +P G +++++LA Q D+LVENF G L + L Y+
Sbjct: 61 GNDTTEAAYYLSANRNKLSVALDIASPRGAELVRELALQSDILVENFKVGGLKKYGLDYE 120
Query: 325 HLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIA 380
L IN +LIYCS+TGFG GPY RPGYD + +GGL+ ITG P G P K G+A
Sbjct: 121 SLKAINPRLIYCSITGFGQTGPYASRPGYDFMIQGMGGLMSITGERDDLPGGGPQKAGVA 180
Query: 381 SIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWG 440
DL TG+Y+ ++AALL + +G GQ ID LL QVSML N N++ +G+ KR G
Sbjct: 181 VADLMTGMYSTVGILAALLERANSGLGQHIDMALLDCQVSMLANQNLNFMTSGVAPKRAG 240
Query: 441 TSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+H N+VP+QVF ++G++ + G+D Q+++ C + L L+ DPR+ T
Sbjct: 241 NAHQNLVPYQVFAAADGHLIVAVGNDSQFRNYCGAIGLPELSADPRFST 289
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 65/136 (47%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C + L L+ DPR+ T RV+NR L + + + WL +GV P +N+
Sbjct: 273 CGAIGLPELSADPRFSTNPQRVKNRAELVPLLAERMATGARDHWLAALEGVGVPAGPINT 332
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
+ QV+ D H+ + +E+ H G + + + +S + E R PPP LGEHT VL +
Sbjct: 333 LDQVYEDPHVLARGMKRELPHPAAGRVPMASSPLKFSDSPVEYRRPPPMLGEHTAQVLAE 392
Query: 122 LLNYDETTIAKLKEKK 137
L I L + +
Sbjct: 393 KLGLSAEDIQALAQSQ 408
>gi|444729983|gb|ELW70381.1| hypothetical protein TREES_T100002603 [Tupaia chinensis]
Length = 621
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 144/274 (52%), Positives = 183/274 (66%), Gaps = 19/274 (6%)
Query: 228 IIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTCVNRNKKSVCVD 287
++AGPF TM L DLGAEVIKVE+P GD+ R WGPPF+ TE STYF VNRNKK
Sbjct: 133 VLAGPFATMNLGDLGAEVIKVERPGAGDDTRTWGPPFVG-TE-STYFLSVNRNKK----- 185
Query: 288 FKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPY 347
LA CDV VEN+VPGKL L LGY+ + +I +IYCS+TG+G GP
Sbjct: 186 ------------LAAVCDVFVENYVPGKLSALGLGYEDIDKIAPHIIYCSITGYGQTGPM 233
Query: 348 KDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKG 407
R GYD +A ++ GL+HITG DG P + G+A DLATGLYA+GA+MA L+ +YKTGKG
Sbjct: 234 SQRAGYDAVACAVSGLMHITGPEDGDPVRPGVAMTDLATGLYAYGAIMAGLIQRYKTGKG 293
Query: 408 QKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDK 467
IDCNLLS+QV+ L V ANYL E KRWGT H ++VP+Q FKT +GY+ +G G+++
Sbjct: 294 LFIDCNLLSSQVACLTQVAANYLIGQKEAKRWGTGHGSIVPYQAFKTKDGYLVVGAGNNQ 353
Query: 468 QYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
Q+ +CK++NL L D +Y T L + LI
Sbjct: 354 QFATVCKILNLPELIDDSKYKTNHLRVKNRKGLI 387
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 43/70 (61%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK++NL L D +Y T LRV+NR+ L K + A+ E+ T WL +F+G PY +N
Sbjct: 358 VCKILNLPELIDDSKYKTNHLRVKNRKGLIKMLSARFEEEITSTWLHLFEGSGVPYGPIN 417
Query: 61 SISQVFADEH 70
S+ VFAD
Sbjct: 418 SMKNVFADPQ 427
>gi|342882594|gb|EGU83211.1| hypothetical protein FOXB_06285 [Fusarium oxysporum Fo5176]
Length = 448
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 135/291 (46%), Positives = 197/291 (67%), Gaps = 12/291 (4%)
Query: 209 SSENPSLP--LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN 266
+++N P L+ ++I+D++R++A PFCT +LAD GA+VIKVE GD+ R W P
Sbjct: 38 TTDNAQSPGALTGLKIMDISRVLAAPFCTQILADYGADVIKVETVGKGDDTRHWMMP--G 95
Query: 267 NTE--------LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDR 318
TE +S YF+ VNRNK+S+ +D K EG++I+K LA DVL+ENF PG +DR
Sbjct: 96 ETEKWKKAAGPMSNYFSAVNRNKRSITLDLKQREGKEILKKLAGNADVLIENFKPGTMDR 155
Query: 319 LNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVG 378
L LGY+ L + N +LIY S++G+G+ GPY +R GYD IAA+ GLLHITG DGPP + G
Sbjct: 156 LGLGYESLQKENPRLIYASISGYGTTGPYANRGGYDPIAAAEAGLLHITGERDGPPVRTG 215
Query: 379 IASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKR 438
I +D+ATGLY HGA++AA+ + + G GQ++D +L Q+S+L NVG ++LN GIE +R
Sbjct: 216 IGMVDMATGLYLHGAILAAVYARDRDGTGQRVDTSLFEAQLSLLTNVGLSWLNLGIEAQR 275
Query: 439 WGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
WG H ++ P+ F+T + Y+ G +D Q+ +CK++ L+ L D R+ T
Sbjct: 276 WGCQHPSIAPYDAFQTKDAYLVCGATNDAQFAALCKLLGLEDLITDDRFAT 326
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 82/144 (56%), Gaps = 9/144 (6%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK++ L+ L D R+ T RVENR LL + +TT+EW+ +F P+ +N
Sbjct: 309 LCKLLGLEDLITDDRFATNPKRVENRHLLGPIFNQVFLTRTTKEWVSVFDKTGLPFGPIN 368
Query: 61 SISQVFADEHIQDIKLVKEISHEKY-----GDIKIVGPAVAYSLTQPEVRTPPPALGEHT 115
++ + F EH Q I ISH + G+I+++GPAV +S T+ ++ PP LGEHT
Sbjct: 369 NMDRAF--EHPQ-IVARDMISHVRLDAAESGEIRLIGPAVKFSRTRMSLQRAPPRLGEHT 425
Query: 116 DYVLKDLLNYDETTIAKLKEKKIL 139
+L++ L ++ A LK+K ++
Sbjct: 426 WDLLEE-LGIEKQEAANLKKKGVI 448
>gi|392565941|gb|EIW59117.1| CAIB/BAIF family enzyme [Trametes versicolor FP-101664 SS1]
Length = 448
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 147/298 (49%), Positives = 200/298 (67%), Gaps = 12/298 (4%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL----- 270
PL V++LDLTR++AGP TMLLADLGA+VIKVE+ GD+ R W PP +
Sbjct: 43 PLRGVKVLDLTRVLAGPTSTMLLADLGADVIKVEEVSRGDDTRSWSPPSAPLSPSAPQET 102
Query: 271 ------STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYK 324
S Y+ VNRNK+S+ V+FK PEG+ I+ L K+ DVLVENF+ GKL LG++
Sbjct: 103 SHLPPESAYYLAVNRNKRSITVNFKEPEGRAILHKLVKEADVLVENFISGKLAESGLGWE 162
Query: 325 HLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDL 384
+IN +LIY S+TG+G GP+K GYD+I + GL+HITG PDGPPCKVG+A D+
Sbjct: 163 DCRKINPRLIYTSITGYGQSGPFKKAAGYDVIVEAEAGLMHITGEPDGPPCKVGVAVTDI 222
Query: 385 ATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHA 444
ATGLYAHGA+MAALL + +TG+G IDCNL +Q++ L N+ +NYL AG G R GTSH
Sbjct: 223 ATGLYAHGAIMAALLSRQQTGQGVWIDCNLFESQLAGLANIASNYLIAGQGGSRHGTSHP 282
Query: 445 NVVPHQVFKTSNGYVTIGTGSDKQYQDMCK-VMNLQHLALDPRYLTGALILAMTSHLI 501
++VP+QVF +G++ IG G+DKQ++ + ++ L DP++ T +A L+
Sbjct: 283 SIVPYQVFPCKDGFIMIGAGNDKQFKLFAETILERADLPSDPKFSTNKARVANRQELV 340
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 1/136 (0%)
Query: 4 VMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSIS 63
++ L DP++ T RV NR+ L I ++ + W+ G+ P+ +N I
Sbjct: 314 ILERADLPSDPKFSTNKARVANRQELVSLITDTLQKQGRDHWIERLTGLGIPFGPINDIE 373
Query: 64 QVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLL 123
Q F + +++ E+ H + G IK+V P V Y+ + + PPP L +HT VL + L
Sbjct: 374 QTFGHPQVAARQMITEVEHPRAGKIKLVSPPVTYNGKRMPIARPPPYLSQHTTEVLTE-L 432
Query: 124 NYDETTIAKLKEKKIL 139
Y E IA L+EK+I+
Sbjct: 433 GYSEEEIATLREKRII 448
>gi|407783936|ref|ZP_11131126.1| CaiB [Oceanibaculum indicum P24]
gi|407198938|gb|EKE68963.1| CaiB [Oceanibaculum indicum P24]
Length = 400
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 138/278 (49%), Positives = 185/278 (66%), Gaps = 5/278 (1%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
++ +R+ DLTRI+AGP LL DLGA++IK+E+P GD+ RKWGPP++ N+T S
Sbjct: 1 MAGIRVFDLTRILAGPSAMQLLGDLGADIIKIERPGQGDDTRKWGPPYIKDADGNDTTES 60
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ C NRNK+SV +D PEGQ + K L QCDVLVEN+ G L + L Y L +
Sbjct: 61 AYYLCANRNKRSVTLDISKPEGQALAKKLIAQCDVLVENYKTGGLAKYGLDYASLKKEFP 120
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+L+YCSVTGFG GPY +R GYD +A +GG++ ITG +G P KVG+ DL G+++
Sbjct: 121 RLVYCSVTGFGQTGPYAERAGYDFVAQGLGGIMSITGEVEGEPVKVGVGIADLMCGMHSA 180
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A++AAL H+ TG+GQ ID LL TQVS L+N NYL +G R G +H N+VP+QV
Sbjct: 181 VAILAALRHRDATGEGQHIDACLLDTQVSWLVNEATNYLVSGQVPVRRGNAHPNIVPYQV 240
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
FK S+GY+ + G+D QYQ C + HLA DPR+LT
Sbjct: 241 FKASDGYIILACGNDGQYQRFCDFAQVNHLASDPRFLT 278
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 72/140 (51%), Gaps = 1/140 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C + HLA DPR+LT R+ NRE L I+A T + W+ + + P + VN
Sbjct: 261 FCDFAQVNHLASDPRFLTNPDRIRNREELIPLIQAVTATQPVSYWVDGLERCNVPCSPVN 320
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGD-IKIVGPAVAYSLTQPEVRTPPPALGEHTDYVL 119
I QVF D ++ L ++ H D + ++ + S T R PPP LG+HTD +L
Sbjct: 321 RIDQVFEDPQVKARDLTVQMDHPLSPDPVTMLAYPLKLSGTPATYRLPPPLLGQHTDDIL 380
Query: 120 KDLLNYDETTIAKLKEKKIL 139
D+LN IA L+EK ++
Sbjct: 381 SDMLNMKAEDIAALREKGVV 400
>gi|330505672|ref|YP_004382541.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
mendocina NK-01]
gi|328919958|gb|AEB60789.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
mendocina NK-01]
Length = 407
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 138/294 (46%), Positives = 196/294 (66%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+C +L DLGAEVIKVE+P TGD+ R WGPP++ N++ +
Sbjct: 5 LSHIRVLDLSRVLAGPWCGQILGDLGAEVIKVERPGTGDDTRHWGPPYIKDAEGNDSREA 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NRNK+S+ +DF PEGQ+++++L QCDVL+ENF G L L Y+ L+ IN
Sbjct: 65 AYFQSANRNKQSLTLDFTQPEGQRLVRELVAQCDVLLENFKVGGLAAYGLDYESLAAINP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 125 RLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPEGEEGAGPVKVGVAVTDILTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA V+AAL + ++G GQ ID LL QV+ L N NYL G+ KR G +H N+V
Sbjct: 185 LYATVGVLAALNQREQSGVGQHIDVALLDVQVACLANQAMNYLATGVSPKRLGNAHPNIV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F +++G + G+D Q++ C+V + +LA DPR++T +A + LI
Sbjct: 245 PYQDFPSADGNFILAVGNDGQFRKFCEVAGIANLADDPRFVTNKARVAHRAELI 298
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 73/139 (52%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V + +LA DPR++T RV +R L + T+ KTT +W+ + + P +N
Sbjct: 269 FCEVAGIANLADDPRFVTNKARVAHRAELIPLLRQATVFKTTAQWIELLEKAGVPCGPIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ QVFAD ++ L ++ + V + S T R+ PP LG+HTD +L+
Sbjct: 329 DLQQVFADPQVKARGLRLDLPNALGSRTPQVASPLRLSATPVAYRSAPPLLGQHTDSLLQ 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
LL ET IA+L+E +L
Sbjct: 389 RLLGMSETQIAELREAGVL 407
>gi|345022239|ref|ZP_08785852.1| hypothetical protein OTW25_13076 [Ornithinibacillus scapharcae
TW25]
Length = 385
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 137/273 (50%), Positives = 186/273 (68%), Gaps = 2/273 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L NVRILDLTR++AGP+CTM+L DLGAE+IKVE P DE RKWGPPF + ++S Y+ C
Sbjct: 5 LKNVRILDLTRVLAGPYCTMILGDLGAEIIKVEAPGGSDETRKWGPPFQH--DVSAYYLC 62
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
NRNKKS+ +D KT EG Q I +L K+ DV++ NF G ++R +GY LS++N +++YC
Sbjct: 63 ANRNKKSITIDLKTTEGIQTIYELVKESDVIIHNFKTGTMERFGIGYDDLSKVNPRIVYC 122
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S+TGFG GPYKD PGYD I ++ GL+ ITG P KVGIA D+ TGLYA + A
Sbjct: 123 SITGFGESGPYKDLPGYDFIIQAMSGLMSITGDESSGPQKVGIAITDILTGLYAVIGIQA 182
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
ALL + ++GKGQ +D +L T VS LIN+G+NYL + R G HAN+VP+Q F+T +
Sbjct: 183 ALLERTQSGKGQSLDLSLYDTAVSALINIGSNYLMSRKIPTRLGNHHANIVPYQTFQTMD 242
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+ I G+D Q++ C ++ + D R+ T
Sbjct: 243 SEMVIAIGNDNQFRAFCTILGKSQYSEDERFKT 275
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 59/121 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C ++ + D R+ T RV+NR++L I+ + K T WL G + P +
Sbjct: 258 FCTILGKSQYSEDERFKTNPARVKNRDILVPLIQDILITKPTSYWLDKCHGTNIPCGPIQ 317
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ +V D + + E+ H G IK++G + +S T +R PP GEH D +L+
Sbjct: 318 NLQEVTEDPQLLARDMFWEMEHPTAGLIKMIGSPLKFSRTPVTLRHHPPNAGEHNDEILQ 377
Query: 121 D 121
+
Sbjct: 378 N 378
>gi|452746272|ref|ZP_21946095.1| putative lipid metabolism-related protein [Pseudomonas stutzeri
NF13]
gi|452009891|gb|EME02101.1| putative lipid metabolism-related protein [Pseudomonas stutzeri
NF13]
Length = 407
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 142/294 (48%), Positives = 191/294 (64%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
LSN+R+LDL+R++AGP+C +L DLGAEVIKVE+P TGD+ R WGPPFL + T +
Sbjct: 5 LSNIRVLDLSRVLAGPWCGQILGDLGAEVIKVERPGTGDDTRHWGPPFLRDEHGADTAEA 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+S+ VDF PEGQ+II++L QCDVL+ENF G L L Y L IN
Sbjct: 65 AYYLSANRNKQSLTVDFTQPEGQRIIRELVTQCDVLLENFKVGGLAAYGLDYASLKAINP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG D P KVG+A D+ TG
Sbjct: 125 RLIYCSITGFGQDGPYATRAGYDFMIQGLGGLMSLTGRSDVEEGAGPVKVGVALTDILTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA V+AAL H+ ++G+GQ ID LL QV+ L N NYL G+ +R G +H N+V
Sbjct: 185 LYASVGVLAALAHRERSGEGQHIDTALLDVQVACLGNQALNYLTTGVAPRRMGNAHPNIV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + + G+D Q++ C+V+ A DPR+ T +A + LI
Sbjct: 245 PYQDFPTADGDIILTVGNDSQFRKFCEVVGRPEWAADPRFATNRARVAHRTELI 298
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 70/139 (50%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V+ A DPR+ T RV +R L I T+ +TT EW+ + P +N
Sbjct: 269 FCEVVGRPEWAADPRFATNRARVAHRTELIPLIRQVTVFRTTAEWVGALELAGVPCGPIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD +Q L EI H G + V + S + + R PPP LGEH++ +L+
Sbjct: 329 DLAQVFADPQVQHRGLSVEIPHPLAGRVPQVASPLRLSASPVDYRNPPPLLGEHSEALLQ 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
LL + IA L+ ++
Sbjct: 389 RLLGMSDEQIAGLRASGVI 407
>gi|83595950|gb|ABC25310.1| CAIB/BAIF family protein [uncultured marine bacterium Ant24C4]
Length = 393
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 141/279 (50%), Positives = 183/279 (65%), Gaps = 6/279 (2%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTG-DECRKWGPPFLNN-----TEL 270
L +RILDLTRI+AGP CT LL DLGAEVIK+E P TG D+ R WGPPF+ T+L
Sbjct: 5 LDGLRILDLTRILAGPTCTQLLGDLGAEVIKIENPATGGDDTRSWGPPFIEGPDGTPTDL 64
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
S YF C NRNK SV VD T EGQ I+ LA QCDV+VENF PG L + L + L + +
Sbjct: 65 SAYFMCANRNKLSVSVDIATKEGQDTIRALAAQCDVMVENFKPGGLAKYGLDAETLLQSD 124
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYA 390
L+YCS++GFG GP +PGYD++A GG++ +TG P G P KVG+ D+ G+YA
Sbjct: 125 PALVYCSISGFGQTGPNASKPGYDLMAQGFGGIMSLTGDPAGEPMKVGVGVADVMCGMYA 184
Query: 391 HGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQ 450
++AAL H+ KTG+GQ ID L+ +Q+S L+N G ++L G KR G H N+VP+Q
Sbjct: 185 TIGILAALRHRDKTGEGQHIDVALVDSQISWLVNEGVSHLTTGDLPKRRGNGHPNIVPYQ 244
Query: 451 VFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
VF TS+G+V I G+D Q+ C + + LA D RY T
Sbjct: 245 VFATSDGHVIIAVGNDTQFSRFCTFLGVPQLAQDLRYAT 283
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C + + LA D RY T R+ENR+ L +I K + + + P V
Sbjct: 266 FCTFLGVPQLAQDLRYATNPARLENRDSLLTQIVPLIAAKPMSDMIDGLEASKVPVGPVQ 325
Query: 61 SISQVFADEHIQDIKLVKEISHE--KYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
++ QVF E ++ ++ I + K G+++++G + S T R PP G+ TD V
Sbjct: 326 TLDQVFGSEQVKARDMIATIPTDDAKAGEVRVIGNPLKLSKTPVTYRRAPPRFGQDTDAV 385
Query: 119 L 119
L
Sbjct: 386 L 386
>gi|407769755|ref|ZP_11117129.1| L-carnitine dehydratase/bile acid-inducible protein F
[Thalassospira xiamenensis M-5 = DSM 17429]
gi|407287272|gb|EKF12754.1| L-carnitine dehydratase/bile acid-inducible protein F
[Thalassospira xiamenensis M-5 = DSM 17429]
Length = 407
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 134/282 (47%), Positives = 187/282 (66%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS +R+LDL+R++AGP+ + LAD+GAEVIK+E+P GD+ R WGPP+ N+T +
Sbjct: 5 LSGLRVLDLSRVLAGPWASQTLADMGAEVIKIERPGAGDDTRGWGPPYAKDVTGNDTSEA 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NR KKS+ +D PEGQ+I+ LA +CDV++ENF G L + L Y LSEIN
Sbjct: 65 AYYLSANRGKKSLTIDMTKPEGQEILHKLAAECDVVIENFKVGGLAKYRLDYASLSEINP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
+++YCS+TGFG GPYKDRPGYD + ++GGL+ ITG PD G P KVG+A D+ TG
Sbjct: 125 KIVYCSITGFGQDGPYKDRPGYDFMIQAMGGLMSITGAPDQEPGGQPMKVGVAVADIFTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA ++AAL H+ TG+GQ +D LL Q ++L N NYL G R G +H N+V
Sbjct: 185 LYATIGILAALRHRDATGEGQHVDLALLDVQTAILANQAMNYLTTGKAPGRLGNAHPNIV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P++ F T++GY+ + G+D Q++ C V + HL D RY +
Sbjct: 245 PYEAFPTADGYIILAVGNDSQFRSFCHVAGIGHLPDDARYAS 286
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C V + HL D RY + RV NRE L +I + KTT++W+ I + + P +N
Sbjct: 269 FCHVAGIGHLPDDARYASNRSRVANRETLVPQIRQAMVMKTTDDWIAILETANVPCGPIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ +VF + ++ V+ + H G + V + +S T T PP LG+H+D +L+
Sbjct: 329 TLDRVFDNPQVKHRDTVRYLDHPTAGKVPTVANPIKFSKTPIAGETAPPMLGQHSDDILR 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ + + IA+L+E I+
Sbjct: 389 QVADLSDAQIARLREAGII 407
>gi|242317024|ref|ZP_04816040.1| CAIB/BAIF family protein [Burkholderia pseudomallei 1106b]
gi|242140263|gb|EES26665.1| CAIB/BAIF family protein [Burkholderia pseudomallei 1106b]
Length = 517
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 136/282 (48%), Positives = 189/282 (67%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
LS++R+LDL+R++AGP+C LADLGA+VIKVE+P GD+ R WGPP+L +T +
Sbjct: 115 LSHIRVLDLSRVLAGPWCAQTLADLGADVIKVERPECGDDTRHWGPPYLKTPDGADTREA 174
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV VD TPEGQ+II++LA QCDV++EN+ G+L + L Y L+ +
Sbjct: 175 AYYLAANRNKRSVTVDIATPEGQRIIRELAAQCDVVLENYKVGQLAKYGLDYASLAAVKP 234
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCSVTGFG GPY R GYD I +GG + ITG P G P K G+A DLATG
Sbjct: 235 GLVYCSVTGFGQTGPYAHRAGYDFIIQGMGGFMSITGERDGLPGGGPQKAGVAIADLATG 294
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ +TG+GQ ID LL QV++L N+ N+L +G RWG +H N+V
Sbjct: 295 LYSTIAILAALAHRDRTGEGQHIDMALLDVQVALLANMNTNFLASGKPPVRWGNAHPNIV 354
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+TS+G++ + G+D Q++ + LA D R+ T
Sbjct: 355 PYQTFETSDGWIIVAVGNDGQFRKFVEAGGRPELADDERFAT 396
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 73/130 (56%)
Query: 10 LALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADE 69
LA D R+ T RV +R+ L + A T +T EWL + + P +N +++VF DE
Sbjct: 388 LADDERFATNPARVRHRDTLVPIVAAMTKTRTKREWLDALEALGVPCGPINDLAEVFDDE 447
Query: 70 HIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETT 129
++ + ++ H K+V + S T P+ R+ PP LGEHTD VL+DLL Y +
Sbjct: 448 QVRARGMQVDLPHPSGASAKLVRNPIRMSATPPDARSAPPLLGEHTDAVLRDLLGYGDAA 507
Query: 130 IAKLKEKKIL 139
IA L++K+++
Sbjct: 508 IAALRDKRVV 517
>gi|237811943|ref|YP_002896394.1| caib/baif family protein [Burkholderia pseudomallei MSHR346]
gi|237505810|gb|ACQ98128.1| caib/baif family protein [Burkholderia pseudomallei MSHR346]
Length = 541
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 136/282 (48%), Positives = 189/282 (67%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
LS++R+LDL+R++AGP+C LADLGA+VIKVE+P GD+ R WGPP+L +T +
Sbjct: 139 LSHIRVLDLSRVLAGPWCAQTLADLGADVIKVERPECGDDTRHWGPPYLKTPDGADTREA 198
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV VD TPEGQ+II++LA QCDV++EN+ G+L + L Y L+ +
Sbjct: 199 AYYLAANRNKRSVTVDIATPEGQRIIRELAAQCDVVLENYKVGQLAKYGLDYASLAAVKP 258
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCSVTGFG GPY R GYD I +GG + ITG P G P K G+A DLATG
Sbjct: 259 GLVYCSVTGFGQTGPYAHRAGYDFIIQGMGGFMSITGERDGLPGGGPQKAGVAIADLATG 318
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ +TG+GQ ID LL QV++L N+ N+L +G RWG +H N+V
Sbjct: 319 LYSTIAILAALAHRDRTGEGQHIDMALLDVQVALLANMNTNFLASGKPPVRWGNAHPNIV 378
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+TS+G++ + G+D Q++ + LA D R+ T
Sbjct: 379 PYQTFETSDGWIIVAVGNDGQFRKFVEAGGRPELADDERFAT 420
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 73/130 (56%)
Query: 10 LALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADE 69
LA D R+ T RV +R+ L + A T +T EWL + + P +N +++VF DE
Sbjct: 412 LADDERFATNPARVRHRDTLVPIVAAMTKTRTKREWLDALKALGVPCGPINDLAEVFDDE 471
Query: 70 HIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETT 129
++ + ++ H K+V + S T P+ R+ PP LGEHTD VL+DLL Y +
Sbjct: 472 QVRARGMQVDLPHPSGATAKLVRNPIRMSATPPDARSAPPLLGEHTDAVLRDLLGYGDAA 531
Query: 130 IAKLKEKKIL 139
IA L++K+++
Sbjct: 532 IAALRDKRVV 541
>gi|76810851|ref|YP_333215.1| CAIB/BAIF family protein [Burkholderia pseudomallei 1710b]
gi|76580304|gb|ABA49779.1| CAIB/BAIF family protein [Burkholderia pseudomallei 1710b]
Length = 544
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 136/282 (48%), Positives = 189/282 (67%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
LS++R+LDL+R++AGP+C LADLGA+VIKVE+P GD+ R WGPP+L +T +
Sbjct: 142 LSHIRVLDLSRVLAGPWCAQTLADLGADVIKVERPECGDDTRHWGPPYLKTPDGADTREA 201
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV VD TPEGQ+II++LA QCDV++EN+ G+L + L Y L+ +
Sbjct: 202 AYYLAANRNKRSVTVDIATPEGQRIIRELAAQCDVVLENYKVGQLAKYGLDYASLAAVKP 261
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCSVTGFG GPY R GYD I +GG + ITG P G P K G+A DLATG
Sbjct: 262 GLVYCSVTGFGQTGPYAHRAGYDFIIQGMGGFMSITGERDGLPGGGPQKAGVAIADLATG 321
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ +TG+GQ ID LL QV++L N+ N+L +G RWG +H N+V
Sbjct: 322 LYSTIAILAALAHRDRTGEGQHIDMALLDVQVALLANMNTNFLASGKPPVRWGNAHPNIV 381
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+TS+G++ + G+D Q++ + LA D R+ T
Sbjct: 382 PYQTFETSDGWIIVAVGNDGQFRKFVEAGGRPELADDERFAT 423
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 73/130 (56%)
Query: 10 LALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADE 69
LA D R+ T RV +R+ L + A T +T EWL + + P +N +++VF DE
Sbjct: 415 LADDERFATNPARVRHRDTLVPIVAAMTKTRTKREWLDALEALGVPCGPINDLAEVFDDE 474
Query: 70 HIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETT 129
++ + ++ H K+V + S T P+ R+ PP LGEHTD VL+DLL Y +
Sbjct: 475 QVRARGMQVDLPHPSGASAKLVRNPIRMSATPPDARSAPPLLGEHTDAVLRDLLGYGDAA 534
Query: 130 IAKLKEKKIL 139
IA L++K+++
Sbjct: 535 IAALRDKRVV 544
>gi|407714238|ref|YP_006834803.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
phenoliruptrix BR3459a]
gi|407236422|gb|AFT86621.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
phenoliruptrix BR3459a]
Length = 406
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 137/282 (48%), Positives = 187/282 (66%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
LS++R+LDLTR++AGP+C LAD GA+VIK+E+P GD+ R WGPP+L +T +
Sbjct: 4 LSHIRVLDLTRVLAGPWCAQTLADFGADVIKIERPQVGDDTRHWGPPYLRTPEGADTREA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV VD +PEGQ+II++LA Q DV++EN+ G+L + L Y L E+
Sbjct: 64 AYYLAANRNKRSVTVDIASPEGQRIIRELASQSDVVLENYKVGQLKKYGLDYASLKEVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHIT----GHPDGPPCKVGIASIDLATG 387
LIYCSVTGFG GPY R GYD I IGG + IT G P G P K G+A DL TG
Sbjct: 124 DLIYCSVTGFGQTGPYAQRAGYDFIVQGIGGFMSITGERDGQPGGGPQKAGVAIADLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+Y+ AV+ AL H+ +TG+GQ ID LL QV+ML N+ +NYL +G RWG +H N+V
Sbjct: 184 MYSTIAVLTALTHRDRTGEGQYIDMALLDVQVAMLANMNSNYLASGQPPVRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+TS+G++ + G+D Q++ +V LA D R+ T
Sbjct: 244 PYQTFQTSDGWIIVAVGNDGQFRKFVEVGQRPELADDARFAT 285
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 72/139 (51%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V LA D R+ T RV +R++L + + ++W+ + P +N
Sbjct: 268 FVEVGQRPELADDARFATNPARVRHRDVLVPILAEMVRLQGKQQWIAALEAAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+++VF +E + + ++ H G +K+V + + T P+ T PP LGEHT+ VL+
Sbjct: 328 DLAEVFGNEQVVARGMQVDLPHPSGGTVKLVRNPINMTGTPPQALTHPPTLGEHTESVLR 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
++L YD+ IA L+ + ++
Sbjct: 388 EMLGYDDERIAALRAQAVI 406
>gi|323526793|ref|YP_004228946.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
sp. CCGE1001]
gi|323383795|gb|ADX55886.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
sp. CCGE1001]
Length = 406
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 137/282 (48%), Positives = 187/282 (66%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
LS++R+LDLTR++AGP+C LAD GA+VIK+E+P GD+ R WGPP+L +T +
Sbjct: 4 LSHIRVLDLTRVLAGPWCAQTLADFGADVIKIERPQVGDDTRHWGPPYLRTPEGADTREA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV VD +PEGQ+II++LA Q DV++EN+ G+L + L Y L E+
Sbjct: 64 AYYLAANRNKRSVTVDIASPEGQRIIRELAAQSDVVLENYKVGQLKKYGLDYASLKEVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHIT----GHPDGPPCKVGIASIDLATG 387
LIYCSVTGFG GPY R GYD I IGG + IT G P G P K G+A DL TG
Sbjct: 124 DLIYCSVTGFGQTGPYAQRAGYDFIVQGIGGFMSITGERDGQPGGGPQKAGVAIADLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+Y+ AV+ AL H+ +TG+GQ ID LL QV+ML N+ +NYL +G RWG +H N+V
Sbjct: 184 MYSTIAVLTALTHRDRTGEGQYIDMALLDVQVAMLANMNSNYLASGQPPVRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+TS+G++ + G+D Q++ +V LA D R+ T
Sbjct: 244 PYQTFQTSDGWIIVAVGNDGQFRKFVEVGQRPELADDARFAT 285
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 72/139 (51%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V LA D R+ T RV +R++L + + ++W+ + P +N
Sbjct: 268 FVEVGQRPELADDARFATNPARVRHRDVLVPILAEMVRLQGKQQWIAALEAAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+++VF +E + + ++ H G +K+V + + T P+ T PP LGEHT+ VL+
Sbjct: 328 DLAEVFENEQVVARGMQVDLPHPSGGTVKLVRNPINMTGTPPQALTHPPTLGEHTESVLR 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
++L YD+ IA L+ + ++
Sbjct: 388 EMLGYDDERIAALRAQAVI 406
>gi|18650800|gb|AAL76419.1| unknown [Mus musculus]
Length = 270
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 138/231 (59%), Positives = 172/231 (74%), Gaps = 2/231 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL VRILDLTR++AGPF TM L D GAEVIKVE+P GD+ R WGPPF+N TE STYF
Sbjct: 38 PLEGVRILDLTRVLAGPFATMNLGDFGAEVIKVERPGAGDDTRSWGPPFVN-TE-STYFL 95
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNKKS+ V+ K P G +I+K+LA CDV VEN+VPGKL + LGY+ + +I +IY
Sbjct: 96 SVNRNKKSIAVNIKDPRGVRIVKELAAICDVFVENYVPGKLSEMGLGYEDIDKIAPHIIY 155
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+G GP R GYD IA+++ GL+HITG DG P + G+A DLATGL+A+GA+M
Sbjct: 156 CSITGYGQTGPMSHRAGYDAIASAMSGLMHITGPEDGDPVRPGVAMTDLATGLFAYGAIM 215
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANV 446
A LL +Y+TGKG IDCNLLS+QV+ L V ANYL E KRWGT+H ++
Sbjct: 216 AGLLQRYRTGKGLFIDCNLLSSQVACLTQVAANYLIGQKEAKRWGTAHGSI 266
>gi|385208722|ref|ZP_10035590.1| putative acyl-CoA transferase/carnitine dehydratase [Burkholderia
sp. Ch1-1]
gi|385181060|gb|EIF30336.1| putative acyl-CoA transferase/carnitine dehydratase [Burkholderia
sp. Ch1-1]
Length = 406
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 136/282 (48%), Positives = 187/282 (66%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
LS++R+LDLTR++AGP+C LAD GA+VIK+E+P GD+ R WGPP+L +T +
Sbjct: 4 LSHIRVLDLTRVLAGPWCAQTLADFGADVIKIERPEVGDDTRHWGPPYLKTPDGADTHEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV VD +PEGQ+II++LA Q DV++EN+ G+L + L Y L E+
Sbjct: 64 AYYLAANRNKRSVTVDIASPEGQRIIRELAAQSDVVLENYKVGQLKKYGLDYASLKEVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHIT----GHPDGPPCKVGIASIDLATG 387
LIYCSVTGFG GPY R GYD I IGG + IT G P G P K G+A DL TG
Sbjct: 124 DLIYCSVTGFGQTGPYAQRAGYDFIVQGIGGFMSITGERDGQPGGGPQKAGVAIADLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+Y+ AV+ AL H+ +TG+GQ ID LL QV+ML N+ +NYL +G RWG +H N+V
Sbjct: 184 MYSTIAVLTALTHRDRTGEGQYIDMALLDVQVAMLANMNSNYLASGQPPVRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+TS+G++ + G+D Q++ + LA+D R+ T
Sbjct: 244 PYQTFQTSDGWIIVAVGNDGQFRKFVEAGGRPELAIDERFAT 285
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%)
Query: 9 HLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFAD 68
LA+D R+ T RV NR++L + + ++W+ + P +N + +VF +
Sbjct: 276 ELAIDERFATNPARVRNRDILVPILADMVRLQGKQQWIAALEAAGVPCGPINDLGEVFEN 335
Query: 69 EHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDET 128
E + L ++ H +K+V + S T PE PP LGEHT +L+D+L YDE
Sbjct: 336 EQVVARGLQVDLPHPSGATVKLVRNPIRMSGTPPEALAHPPTLGEHTASILRDVLGYDEA 395
Query: 129 TIAKLKEKKIL 139
IA L+ + ++
Sbjct: 396 KIAALRAQSVI 406
>gi|330816604|ref|YP_004360309.1| Predicted acyl-CoA transferases/carnitine dehydratase [Burkholderia
gladioli BSR3]
gi|327368997|gb|AEA60353.1| Predicted acyl-CoA transferases/carnitine dehydratase [Burkholderia
gladioli BSR3]
Length = 406
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 134/282 (47%), Positives = 188/282 (66%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+C LAD GA+VIK+E+P GD+ R WGPP+ ++T +
Sbjct: 4 LSHIRVLDLSRVLAGPWCAQTLADFGADVIKIERPGAGDDTRHWGPPYHRAADGSDTREA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV VD +PEGQ++I++LA QCDV++EN+ G+L + L Y L E+
Sbjct: 64 AYYLAANRNKRSVTVDIASPEGQRVIRELAAQCDVVIENYKAGQLKKYGLDYASLRELKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITG----HPDGPPCKVGIASIDLATG 387
LIYCSVTGFG GPY R GYD I +GG + ITG P G P K G+A DLATG
Sbjct: 124 DLIYCSVTGFGQTGPYAHRAGYDFIIQGLGGFMSITGERDSEPGGGPQKAGVAIADLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ +TG+GQ ID LL QV++L N+ NYL +G RWG +H N+V
Sbjct: 184 LYSSVAILAALTHRDRTGEGQHIDMALLDVQVALLANMNTNYLASGQPPVRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+TS+G++ + G+D Q++ + LA D R+ T
Sbjct: 244 PYQTFQTSDGWIIVAVGNDGQFRKFVEAGGRGELADDERFAT 285
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 69/127 (54%)
Query: 10 LALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADE 69
LA D R+ T RV +R +L + T + +EW+ + P +N +++VF +E
Sbjct: 277 LADDERFATNPARVRHRPILVPILAEMTRTRGKQEWIAALEAAGVPCGPINDLAEVFENE 336
Query: 70 HIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETT 129
+ L E+ H +K+V V S T PE R+ PP LGEHT+ VL++LL YDE
Sbjct: 337 QVVARDLQVELPHPSGAPVKLVRNPVKMSATPPEARSAPPLLGEHTEAVLRELLGYDEAA 396
Query: 130 IAKLKEK 136
IA L++K
Sbjct: 397 IAALRDK 403
>gi|91784489|ref|YP_559695.1| alpha-methylacyl-CoA racemase [Burkholderia xenovorans LB400]
gi|91688443|gb|ABE31643.1| Alpha-methylacyl-CoA racemase [Burkholderia xenovorans LB400]
Length = 406
Score = 294 bits (752), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 137/282 (48%), Positives = 187/282 (66%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
LS++R+LDLTR++AGP+C LAD GA+VIK+E+P GD+ R WGPP+L +T +
Sbjct: 4 LSHIRVLDLTRVLAGPWCAQTLADFGADVIKIERPQVGDDTRHWGPPYLKTPDGADTHEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV VD +PEGQ+II++LA Q DV++EN+ G+L + L Y L E+
Sbjct: 64 AYYLAANRNKRSVTVDIASPEGQRIIRELAAQSDVVLENYKVGQLKKYGLDYASLKEVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHIT----GHPDGPPCKVGIASIDLATG 387
LIYCSVTGFG GPY R GYD I IGG + IT G P G P K G+A DL TG
Sbjct: 124 DLIYCSVTGFGQTGPYAQRAGYDFIVQGIGGFMSITGERDGQPGGGPQKAGVAIADLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+Y+ AV+ AL H+ +TG+GQ ID LL QV+ML N+ +NYL +G RWG +H N+V
Sbjct: 184 MYSTIAVLTALTHRDRTGEGQYIDMALLDVQVAMLANMNSNYLTSGQPPVRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+TS+G++ + G+D Q++ +V LA D R+ T
Sbjct: 244 PYQTFQTSDGWIIVAVGNDGQFRKFVEVGGRPELANDERFAT 285
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V LA D R+ T RV +R++L + + ++W+ + P +N
Sbjct: 268 FVEVGGRPELANDERFATNPARVRHRDILVPILADMVRLQGKQQWIAALEAAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ +VF +E + L ++ H +K+V + S T PE PP LGEHT +L+
Sbjct: 328 DLGEVFENEQVVARGLQVDLPHPSGATVKLVRNPIRMSGTPPEALAHPPTLGEHTASILR 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
D+L YDE IA L+ + ++
Sbjct: 388 DVLGYDEAKIAALRAQSVI 406
>gi|293603107|ref|ZP_06685541.1| CAIB/BAIF family protein [Achromobacter piechaudii ATCC 43553]
gi|292818501|gb|EFF77548.1| CAIB/BAIF family protein [Achromobacter piechaudii ATCC 43553]
Length = 409
Score = 293 bits (751), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 135/289 (46%), Positives = 194/289 (67%), Gaps = 10/289 (3%)
Query: 210 SENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL---- 265
S+ P+ PL+ +R+LDLTR++AGP+CT LADLGAEVIK+E+P +GD+ R WGPP+L
Sbjct: 2 SQRPA-PLTGIRVLDLTRVLAGPWCTQNLADLGAEVIKIERPGSGDDTRAWGPPYLKDEA 60
Query: 266 -NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYK 324
N+T + Y+ NRNK SV +D +P G +++++LA Q D+LVENF G L + L Y+
Sbjct: 61 GNDTTEAAYYLSANRNKMSVALDIASPRGAELVRELALQSDILVENFKVGGLKKYGLDYE 120
Query: 325 HLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIA 380
L IN +LIYCS+TGFG GPY RPGYD + +GGL+ ITG P G P K G+A
Sbjct: 121 SLKAINPRLIYCSITGFGQTGPYASRPGYDFMIQGMGGLMSITGERDDLPGGGPQKAGVA 180
Query: 381 SIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWG 440
DL TG+Y+ ++AALL + +G GQ ID LL QV+ML N N++ +G+ +R G
Sbjct: 181 VADLMTGMYSTVGILAALLERANSGLGQHIDMALLDCQVTMLANQNLNFMTSGVAPQRAG 240
Query: 441 TSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+H N+VP+QVF ++G++ + G+D Q+++ C + L L+ DPR+ T
Sbjct: 241 NAHQNLVPYQVFAAADGHLIVAVGNDSQFRNYCGAIGLPELSADPRFST 289
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C + L L+ DPR+ T RV+NR L + + + WL +GV P +N+
Sbjct: 273 CGAIGLPELSADPRFSTNPQRVKNRAELVPLLAERMATGARDHWLTALEGVGVPAGPINT 332
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
+ QV+ D H+ + +E+ H G + + + +S + + R PPP LGEHT VL +
Sbjct: 333 LDQVYEDPHVLARDMKRELPHPAAGKVPMASSPLKFSDSPVQYRRPPPMLGEHTAQVLAE 392
Query: 122 LLNYDETTIAKLKEKK 137
L I L + +
Sbjct: 393 KLGLSTEEIQALAQSQ 408
>gi|91790920|ref|YP_551871.1| L-carnitine dehydratase/bile acid-inducible protein F [Polaromonas
sp. JS666]
gi|91700800|gb|ABE46973.1| L-carnitine dehydratase/bile acid-inducible protein F [Polaromonas
sp. JS666]
Length = 407
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 140/295 (47%), Positives = 191/295 (64%), Gaps = 9/295 (3%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTEL 270
PLS +++LDL+RI+AGP+ T LL+DLGA+VIKVE+P GD+ R WGPPFL + T
Sbjct: 4 PLSGIKVLDLSRILAGPWSTQLLSDLGADVIKVERPAGGDDTRGWGPPFLAREDGSATAE 63
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
S YF NR K+S+ +D TPEGQ I+++LAK DV VEN+ G + R L Y L EIN
Sbjct: 64 SAYFLSANRGKRSITIDISTPEGQGILRELAKTVDVFVENYKLGDMKRYGLDYAALCEIN 123
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPC----KVGIASIDLAT 386
L+YCS+TGFG GPY R GYD + ++GGL+ ITG D P K G+ DL T
Sbjct: 124 PGLVYCSITGFGQTGPYSSRAGYDFVIQAMGGLMSITGQSDDQPGGGAQKCGVPISDLMT 183
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANV 446
G+YA A+++AL + ++GKGQ ID +LL TQVS L N +NYL +G KRWG +H N+
Sbjct: 184 GMYASVAIVSALFERTRSGKGQYIDMSLLDTQVSWLANQASNYLVSGKPPKRWGNAHPNL 243
Query: 447 VPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F S+G + + G+D+Q+ +C+ + ++ L D RY T A L + LI
Sbjct: 244 APYQSFAASDGELIVAVGNDRQFAALCRTLGVEELTHDERYATNAQRLQHRATLI 298
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 63/139 (45%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + ++ L D RY T A R+++R L + + + WL + P +
Sbjct: 269 LCRTLGVEELTHDERYATNAQRLQHRATLIPALSELFVRASKRHWLDQLERSGVPCGPIQ 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI + ADEH+ +V + H + + +S + R PPAL EHTD +L
Sbjct: 329 SIPEALADEHVLARGMVFSLPHTSGVSAPQIANPIKFSRSSIHYRRAPPALSEHTDEILT 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
L + IA K+K ++
Sbjct: 389 TELGWSAERIAHSKKKGVI 407
>gi|416904863|ref|ZP_11930746.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
sp. TJI49]
gi|325529340|gb|EGD06274.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
sp. TJI49]
Length = 429
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 137/282 (48%), Positives = 187/282 (66%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
LS++R+LDLTR++AGP+C LAD GA+VIKVE+P GD+ R WGPP+L + T +
Sbjct: 27 LSHIRVLDLTRVLAGPWCAQTLADFGADVIKVERPGAGDDTRHWGPPYLKDAHGADTAEA 86
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV VD TPEGQQI+++LA Q DV++EN+ G+L + L Y+ L +
Sbjct: 87 AYYLAANRNKRSVTVDIATPEGQQIVRELAAQSDVVLENYKVGQLKKYGLDYESLRAVKP 146
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHIT----GHPDGPPCKVGIASIDLATG 387
L+YCSVTGFG GPY R GYD I IGG + IT G P G P K G+A DLATG
Sbjct: 147 DLVYCSVTGFGQTGPYAHRAGYDFIVQGIGGFMSITGERDGEPGGGPQKAGVAIADLATG 206
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ AV+AAL H+ +TG+GQ ID LL QV++L N+ N+L +G RWG +H N+V
Sbjct: 207 LYSTIAVLAALAHRDRTGEGQYIDMALLDVQVALLANMNTNFLASGKPPVRWGNAHPNIV 266
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+TS+G++ + G+D Q++ + LA D R+ T
Sbjct: 267 PYQTFQTSDGWIIVAVGNDGQFRKFVEAGGRAELAEDERFAT 308
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 64/130 (49%)
Query: 10 LALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADE 69
LA D R+ T RV +R++L + ++ W+ + P +N + +VF +E
Sbjct: 300 LAEDERFATNPARVRHRDMLVPILAEMVKTRSKTAWIDALEAAGVPCGPINDLDEVFDNE 359
Query: 70 HIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETT 129
+ + + H D+K+V + S T P+ R PP LG TD VL+D+L YD
Sbjct: 360 QVIARGMQIALPHPCGADVKLVRNPIRMSATPPDARPAPPLLGAQTDEVLRDVLGYDAAR 419
Query: 130 IAKLKEKKIL 139
IA LK K+ +
Sbjct: 420 IAALKAKQAI 429
>gi|53725059|ref|YP_102625.1| CAIB/BAIF family protein [Burkholderia mallei ATCC 23344]
gi|52428482|gb|AAU49075.1| CAIB/BAIF family protein [Burkholderia mallei ATCC 23344]
Length = 577
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 136/282 (48%), Positives = 189/282 (67%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
LS++R+LDL+R++AGP+C LADLGA+VIKVE+P GD+ R WGPP+L +T +
Sbjct: 175 LSHIRVLDLSRVLAGPWCAQTLADLGADVIKVERPECGDDTRHWGPPYLKTPDGADTREA 234
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV VD TPEGQ+II++LA QCDV++EN+ G+L + L Y L+ +
Sbjct: 235 AYYLAANRNKRSVTVDIATPEGQRIIRELAAQCDVVLENYKVGQLAKYGLDYASLAAVKP 294
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCSVTGFG GPY R GYD I +GG + ITG P G P K G+A DLATG
Sbjct: 295 GLVYCSVTGFGQTGPYAHRAGYDFIIQGMGGFMSITGERDGLPGGGPQKAGVAIADLATG 354
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ +TG+GQ ID LL QV++L N+ N+L +G RWG +H N+V
Sbjct: 355 LYSTIAILAALAHRDRTGEGQHIDMALLDVQVALLANMNTNFLASGKPPVRWGNAHPNIV 414
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+TS+G++ + G+D Q++ + LA D R+ T
Sbjct: 415 PYQTFETSDGWIIVAVGNDGQFRKFVEAGGRPELADDERFAT 456
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 73/130 (56%)
Query: 10 LALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADE 69
LA D R+ T RV +R+ L + A T +T EWL + + P +N +++VF DE
Sbjct: 448 LADDERFATNPARVRHRDTLVPIVAAMTKTRTKREWLDALEALGVPCGPINDLAEVFDDE 507
Query: 70 HIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETT 129
++ + ++ H K+V + S T P+ R+ PP LGEHTD VL+DLL Y +
Sbjct: 508 QVRARGMQVDLPHPSGASAKLVRNPIRMSATPPDARSAPPLLGEHTDAVLRDLLGYGDAA 567
Query: 130 IAKLKEKKIL 139
IA L++K+++
Sbjct: 568 IAALRDKRVV 577
>gi|121600206|ref|YP_992754.1| CAIB/BAIF family protein [Burkholderia mallei SAVP1]
gi|121229016|gb|ABM51534.1| CAIB/BAIF family protein [Burkholderia mallei SAVP1]
Length = 568
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 136/282 (48%), Positives = 189/282 (67%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
LS++R+LDL+R++AGP+C LADLGA+VIKVE+P GD+ R WGPP+L +T +
Sbjct: 166 LSHIRVLDLSRVLAGPWCAQTLADLGADVIKVERPECGDDTRHWGPPYLKTPDGADTREA 225
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV VD TPEGQ+II++LA QCDV++EN+ G+L + L Y L+ +
Sbjct: 226 AYYLAANRNKRSVTVDIATPEGQRIIRELAAQCDVVLENYKVGQLAKYGLDYASLAAVKP 285
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCSVTGFG GPY R GYD I +GG + ITG P G P K G+A DLATG
Sbjct: 286 GLVYCSVTGFGQTGPYAHRAGYDFIIQGMGGFMSITGERDGLPGGGPQKAGVAIADLATG 345
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ +TG+GQ ID LL QV++L N+ N+L +G RWG +H N+V
Sbjct: 346 LYSTIAILAALAHRDRTGEGQHIDMALLDVQVALLANMNTNFLASGKPPVRWGNAHPNIV 405
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+TS+G++ + G+D Q++ + LA D R+ T
Sbjct: 406 PYQTFETSDGWIIVAVGNDGQFRKFVEAGGRPELADDERFAT 447
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 73/130 (56%)
Query: 10 LALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADE 69
LA D R+ T RV +R+ L + A T +T EWL + + P +N +++VF DE
Sbjct: 439 LADDERFATNPARVRHRDTLVPIVAAMTKTRTKREWLDALEALGVPCGPINDLAEVFDDE 498
Query: 70 HIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETT 129
++ + ++ H K+V + S T P+ R+ PP LGEHTD VL+DLL Y +
Sbjct: 499 QVRARGMQVDLPHPSGASAKLVRNPIRMSATPPDARSAPPLLGEHTDAVLRDLLGYGDAA 558
Query: 130 IAKLKEKKIL 139
IA L++K+++
Sbjct: 559 IAALRDKRVV 568
>gi|56697724|ref|YP_168094.1| CAIB/BAIF family protein [Ruegeria pomeroyi DSS-3]
gi|56679461|gb|AAV96127.1| CAIB/BAIF family protein [Ruegeria pomeroyi DSS-3]
Length = 397
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 134/286 (46%), Positives = 191/286 (66%), Gaps = 6/286 (2%)
Query: 210 SENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTG-DECRKWGPPFL--- 265
SE P PL VR+LDL+RI+AGP CT LL DLGA VIK+E P +G D+ R+WGPP++
Sbjct: 4 SEQPKGPLDGVRVLDLSRILAGPTCTQLLGDLGANVIKIENPGSGGDDTRQWGPPYVTDA 63
Query: 266 --NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGY 323
N ++LS YF NRNKKSV +D TPEGQ I+ LA D+L+ENF PG L + L Y
Sbjct: 64 EGNPSDLSAYFMAANRNKKSVTLDISTPEGQAQIRRLAAHADILIENFKPGGLAKYGLDY 123
Query: 324 KHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASID 383
+ L+YCS++GFG GP +PGYD++A GG++ +TG P+G P KVG+ D
Sbjct: 124 ASIGPEFPSLVYCSISGFGQTGPNASKPGYDLMAQGFGGVMSLTGEPEGAPMKVGVGIAD 183
Query: 384 LATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSH 443
+ G+YA ++AAL H+ +TG+GQ ID L+ QV+ +IN G NYL +G +R G +H
Sbjct: 184 VMCGMYATVGILAALHHRERTGEGQHIDLALVDAQVAWMINEGVNYLTSGALPQRRGNAH 243
Query: 444 ANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
N+VP+ ++ TS+G+V + G+D Q++ +C+ ++L LA +PR+ T
Sbjct: 244 PNIVPYDLYATSDGHVVLAVGNDSQFRRVCEFLDLAALADNPRFAT 289
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ ++L LA +PR+ T R++NR L + ++ E + + V
Sbjct: 272 VCEFLDLAALADNPRFATNQARLQNRATLDALLRPALAARSKAEVIAGLEARKVTVGPVQ 331
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I QVFA + + ++ ++ + G + ++G + S T R PP G+ T+ VL
Sbjct: 332 TIDQVFASDQVAARQMQIDMESQA-GPVHLIGNPLKLSRTPVTYRRAPPRCGQDTETVLS 390
>gi|413958430|ref|ZP_11397669.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
sp. SJ98]
gi|413941010|gb|EKS72970.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
sp. SJ98]
Length = 406
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 135/280 (48%), Positives = 185/280 (66%), Gaps = 9/280 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDLTR++AGP+C LAD GA+VIK+E+P TGD+ R WGPP+L N+T +
Sbjct: 4 LSHIRVLDLTRVLAGPWCAQTLADFGADVIKIERPGTGDDTRHWGPPYLKTPEGNDTHEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV VD TPEGQQI+++LA Q DV++EN+ G+L + L Y+ L +
Sbjct: 64 AYYLAANRNKRSVTVDIATPEGQQIVRELAAQSDVVLENYKAGQLKKYGLDYESLKAVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHIT----GHPDGPPCKVGIASIDLATG 387
+IYCSVTGFG GPY R GYD I IGG + IT G P G P K G+A DL TG
Sbjct: 124 DIIYCSVTGFGQTGPYASRAGYDFIVQGIGGFMSITGERDGQPGGGPQKAGVAIADLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA V+ AL H+ +TG+GQ ID LL QV+ML N+ N+L +G RWG +H N+V
Sbjct: 184 MYATIGVLTALAHRDRTGEGQYIDMALLDVQVAMLANMNTNFLASGKPPVRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
P+Q F+TS+G++ + G+D Q++ + LA D R+
Sbjct: 244 PYQTFQTSDGWIIVAVGNDGQFRKFVEAGGRPELADDARF 283
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 68/130 (52%)
Query: 10 LALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADE 69
LA D R+ RV NR++L + K EW+ + P +N + +VF D
Sbjct: 277 LADDARFAANPSRVRNRDMLVPILADMVRLKGKHEWIAELEAAGVPCGPINDLGEVFEDP 336
Query: 70 HIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETT 129
+ ++ ++ H G +K+V + S T PE RT PP LGEHT VL D+L YDE
Sbjct: 337 QVLARRMQIDLPHPTAGTVKLVASPIKMSATPPEARTHPPLLGEHTSSVLADVLGYDEAK 396
Query: 130 IAKLKEKKIL 139
IA+L+EKK +
Sbjct: 397 IARLREKKAI 406
>gi|307730459|ref|YP_003907683.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
sp. CCGE1003]
gi|307584994|gb|ADN58392.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
sp. CCGE1003]
Length = 406
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 136/282 (48%), Positives = 187/282 (66%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
LS++R+LDLTR++AGP+C LAD GA+VIK+E+P GD+ R WGPP+L +T +
Sbjct: 4 LSHIRVLDLTRVLAGPWCAQTLADFGADVIKIERPEVGDDTRHWGPPYLKTPDGADTREA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV VD +PEGQQI+++LA Q DV++EN+ G+L + L Y L ++
Sbjct: 64 AYYLAANRNKRSVTVDIASPEGQQIVRELAAQSDVVLENYKVGQLKKYGLDYASLKKVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHIT----GHPDGPPCKVGIASIDLATG 387
LIYCSVTGFG GPY R GYD I IGG + IT G P G P K G+A DL TG
Sbjct: 124 DLIYCSVTGFGQTGPYAQRAGYDFIVQGIGGFMSITGERDGQPGGGPQKAGVAIADLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+Y+ AV+ AL H+ +TG+GQ ID LL QV+ML N+ +NYL +G RWG +H N+V
Sbjct: 184 MYSTIAVLTALTHRDRTGEGQYIDMALLDVQVAMLANMNSNYLASGQPPVRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+TS+G++ + G+D Q++ +V LA D R+ T
Sbjct: 244 PYQTFQTSDGWIIVAVGNDGQFRKFVEVGQRPELAEDERFAT 285
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V LA D R+ T RV NR++L + + +EW+ + P +N
Sbjct: 268 FVEVGQRPELAEDERFATNPARVRNRDVLVPILAQMVRLQGKQEWITALEAAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+++VFA+E + + ++ H G +K+V + + T PE PP LGEHT+ VL+
Sbjct: 328 DLAEVFANEQVVARGMQVDLPHPSGGTVKLVRNPINMTGTPPEALAHPPTLGEHTESVLR 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
D+L Y + I L+ + ++
Sbjct: 388 DVLGYSDERITALRSQAVI 406
>gi|148700778|gb|EDL32725.1| cDNA sequence AF397014, isoform CRA_a [Mus musculus]
Length = 276
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 139/230 (60%), Positives = 171/230 (74%), Gaps = 2/230 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL VRILDLTR++AGPF TM L DLGAEVIKVE+P GD+ R WGPPF+N TE STYF
Sbjct: 38 PLEGVRILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRSWGPPFVN-TE-STYFL 95
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNKKS+ V+ K P G +I+K+LA CDV VEN+VPGKL + LGY+ + +I +IY
Sbjct: 96 SVNRNKKSIAVNIKDPRGVRIVKELAAICDVFVENYVPGKLSEMGLGYEDIDKIAPHIIY 155
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+G GP R GYD IA+++ GL+HITG DG P + G+A DLATGL+A+GA+M
Sbjct: 156 CSITGYGQTGPMSHRAGYDAIASAMSGLMHITGPEDGDPVRPGVAMTDLATGLFAYGAIM 215
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHAN 445
A LL +Y+TGKG IDCNLLS+QV+ L V ANYL E KRWGT+H
Sbjct: 216 AGLLQRYRTGKGLFIDCNLLSSQVACLTQVAANYLIGQKEAKRWGTAHGT 265
>gi|452130463|ref|ZP_21943035.1| CoA-transferase [Bordetella holmesii H558]
gi|451920388|gb|EMD70534.1| CoA-transferase [Bordetella holmesii H558]
Length = 410
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 132/285 (46%), Positives = 192/285 (67%), Gaps = 9/285 (3%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNT 268
+ PL+ +R+LDLTR++AGP+CT LADLGAEVIK+E+P GD+ R WGPP+L NT
Sbjct: 5 TAPLAGIRVLDLTRVLAGPWCTQNLADLGAEVIKIERPGAGDDTRAWGPPYLKDAAGQNT 64
Query: 269 ELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSE 328
+ Y+ NRNK SV +D + G +++++LAKQCD++VENF G L + L Y+ L
Sbjct: 65 SEAAYYLSANRNKFSVALDIASARGAELVRELAKQCDIVVENFKVGGLRKYGLDYESLKA 124
Query: 329 INSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDL 384
IN ++IYCS+TGFG GPY RPGYD + +GGL+ ITG P G P K G+A DL
Sbjct: 125 INPRIIYCSITGFGQTGPYASRPGYDFMIQGMGGLMSITGERDDLPGGGPQKAGVAVADL 184
Query: 385 ATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHA 444
TG+Y+ ++AA++ + ++G GQ ID LL QV+ML N N++ +G +R G +H
Sbjct: 185 MTGMYSTVGILAAVIERERSGLGQHIDMALLDCQVAMLANQNLNFMTSGQAPQRAGNAHQ 244
Query: 445 NVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
N+VP+QVF ++G++ + G+D Q+++ C+V+ L LA DPR+ T
Sbjct: 245 NLVPYQVFAAADGHLIVAVGNDGQFRNYCRVLGLPELAADPRFST 289
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 64/132 (48%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C+V+ L LA DPR+ T RV NRE L + + + WL + P +N+
Sbjct: 273 CRVLGLPELAADPRFSTNPQRVRNRETLVPLLVERMATGARDTWLAELEAAGVPAGPINT 332
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
+ QV+ D H+Q + +E+ H G + I + +S T E R P P LGEHT +L +
Sbjct: 333 LDQVYEDPHVQARGMKRELPHALAGTVPIAASPLKFSDTPIEYRRPAPMLGEHTRQILSE 392
Query: 122 LLNYDETTIAKL 133
L + I L
Sbjct: 393 RLGLSDEDIQAL 404
>gi|217423653|ref|ZP_03455154.1| CAIB/BAIF family protein [Burkholderia pseudomallei 576]
gi|217393511|gb|EEC33532.1| CAIB/BAIF family protein [Burkholderia pseudomallei 576]
Length = 535
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 136/282 (48%), Positives = 189/282 (67%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
LS++R+LDL+R++AGP+C LADLGA+VIKVE+P GD+ R WGPP+L +T +
Sbjct: 133 LSHIRVLDLSRVLAGPWCAQTLADLGADVIKVERPECGDDTRHWGPPYLKTPDGADTREA 192
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV VD TPEGQ+II++LA QCDV++EN+ G+L + L Y L+ +
Sbjct: 193 AYYLAANRNKRSVTVDIATPEGQRIIRELAAQCDVVLENYKVGQLAKYGLDYASLAAVKP 252
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCSVTGFG GPY R GYD I +GG + ITG P G P K G+A DLATG
Sbjct: 253 GLVYCSVTGFGQTGPYAHRAGYDFIIQGMGGFMSITGERDGLPGGGPQKAGVAIADLATG 312
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ +TG+GQ ID LL QV++L N+ N+L +G RWG +H N+V
Sbjct: 313 LYSTIAILAALAHRDRTGEGQHIDMALLDVQVALLANMNTNFLASGKPPVRWGNAHPNIV 372
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+TS+G++ + G+D Q++ + LA D R+ T
Sbjct: 373 PYQTFETSDGWIIVAVGNDGQFRKFVEAGGRPELADDERFAT 414
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 73/130 (56%)
Query: 10 LALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADE 69
LA D R+ T RV +R+ L + A T +T EWL + + P +N +++VF DE
Sbjct: 406 LADDERFATNPARVRHRDTLVPIVAAMTKTRTKREWLDALEALGVPCGPINDLAEVFDDE 465
Query: 70 HIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETT 129
++ + ++ H K+V + S T P+ R+ PP LGEHTD VL+D+L Y +
Sbjct: 466 QVRARGMQVDLPHPSGASAKLVRNPIRMSATPPDARSAPPLLGEHTDAVLRDMLGYGDAA 525
Query: 130 IAKLKEKKIL 139
IA L++K+++
Sbjct: 526 IAALRDKRVV 535
>gi|359800843|ref|ZP_09303379.1| CoA-transferase [Achromobacter arsenitoxydans SY8]
gi|359361225|gb|EHK62986.1| CoA-transferase [Achromobacter arsenitoxydans SY8]
Length = 405
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 138/295 (46%), Positives = 193/295 (65%), Gaps = 9/295 (3%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTEL 270
PL +R+LDL+RI+AGP+CT LADLGA+VIK+E+P GD+ R WGPPFL +T
Sbjct: 6 PLDGIRVLDLSRILAGPWCTQNLADLGADVIKIERPKVGDDTRAWGPPFLKDGDGQDTNE 65
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
S Y+ NRNK+SV D TPEG +I++LA D+LVENF G L + L Y+ + +IN
Sbjct: 66 SAYYLSANRNKRSVEADMATPEGAALIRELAAVSDILVENFKVGGLAKYGLDYQSVKDIN 125
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLAT 386
+LIYCSVTGFG GP+ RPGYD + +GGL+ ITG P G P K G+A D+ T
Sbjct: 126 PRLIYCSVTGFGQDGPFAQRPGYDFMIQGMGGLMSITGERDDLPGGGPQKAGVAVTDIVT 185
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANV 446
G+YA AV+AAL ++++G GQ +D LL + V++L N +NY N+G+ R G +H NV
Sbjct: 186 GMYATVAVLAALQERHRSGLGQHLDIALLDSHVALLANQNSNYFNSGVAPTRAGNAHQNV 245
Query: 447 VPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
VP+QVF S+G++ + TG++ QY+ C+ + + L D R+ T L +A L+
Sbjct: 246 VPYQVFAASDGHLIVATGNESQYRAYCRAIGVPELGDDARFATNRLRVANREELV 300
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 66/134 (49%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C+ + + L D R+ T LRV NRE L + A + ++W+ + V P +N+
Sbjct: 272 CRAIGVPELGDDARFATNRLRVANREELVGILAAIMRDGRRDDWIAKLEAVGVPCGPINN 331
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
I+Q FA Q +L +++ H G + + +S + R PP LGEHT+ VL+D
Sbjct: 332 IAQAFAHPQAQARQLRRDLPHPAGGVAPVTASPLRFSGSPVVYRRAPPLLGEHTEEVLRD 391
Query: 122 LLNYDETTIAKLKE 135
+L IA ++
Sbjct: 392 VLGKSPQAIAAFRK 405
>gi|161525079|ref|YP_001580091.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
multivorans ATCC 17616]
gi|160342508|gb|ABX15594.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
multivorans ATCC 17616]
Length = 452
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 136/282 (48%), Positives = 186/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
LS++R+LDLTR++AGP+C LAD GA+VIK+E+P GD+ R WGPP+L + T +
Sbjct: 50 LSHIRVLDLTRVLAGPWCAQTLADFGADVIKIERPGAGDDTRHWGPPYLKDAHGADTAEA 109
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV VD TPEGQQI+++LA Q DV++EN+ G+L + L Y L +
Sbjct: 110 AYYLAANRNKRSVTVDIATPEGQQIVRELAAQSDVVLENYKVGQLKKYGLDYASLRAVKP 169
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCSVTGFG GPY R GYD I IGG + ITG P G P K G+A DLATG
Sbjct: 170 DLVYCSVTGFGQTGPYAHRAGYDFIVQGIGGFMSITGERDGVPGGGPQKAGVAIADLATG 229
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ AV+AAL H+ +TG+GQ ID LL QV++L N+ N+L +G RWG +H N+V
Sbjct: 230 LYSTIAVLAALAHRDRTGEGQYIDMALLDVQVALLANMNTNFLASGTPPVRWGNAHPNIV 289
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+TS+G++ + G+D Q++ + LA D R+ T
Sbjct: 290 PYQTFQTSDGWIIVAVGNDGQFRKFVEAGGRPELADDERFAT 331
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 68/130 (52%)
Query: 10 LALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADE 69
LA D R+ T RV +R+ L + ++ W+ + P +N +++VFA+E
Sbjct: 323 LADDERFATNPARVRHRDTLVPILAEMVKTRSKTAWIDALEAAGVPCGPINDLAEVFANE 382
Query: 70 HIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETT 129
+ + + H D+K+V V S T P+ RT PP LG HTD VL+D+L YD+
Sbjct: 383 QVVARGMEVALPHPCGADVKLVRNPVRMSATPPDARTAPPLLGAHTDDVLRDMLGYDDAR 442
Query: 130 IAKLKEKKIL 139
IA LK K+ +
Sbjct: 443 IAALKAKQAI 452
>gi|372266811|ref|ZP_09502859.1| L-carnitine dehydratase/bile acid-inducible protein F [Alteromonas
sp. S89]
Length = 406
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 137/285 (48%), Positives = 189/285 (66%), Gaps = 9/285 (3%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNT 268
S PLS++++LDL+RI+AGP+ + +LAD GAEVIK+E+P GD+ R WGPP+L N+T
Sbjct: 2 SGPLSHLKVLDLSRILAGPWASQVLADFGAEVIKIERPGKGDDTRHWGPPYLQDAEGNDT 61
Query: 269 ELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSE 328
+ Y+ NR KKS+ VD PEGQ +IK+L +QCDVL+EN+ G L + L Y +
Sbjct: 62 ADAAYYLSANRGKKSITVDITKPEGQALIKELVQQCDVLLENYKVGGLAKYGLDYPSIRA 121
Query: 329 INSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPC----KVGIASIDL 384
IN ++IYCS+TGFG GPY R GYD + +GGL+ ITG P+G P KVG+A DL
Sbjct: 122 INPRIIYCSITGFGQTGPYAQRAGYDAMIQGMGGLMSITGVPEGQPGAGPQKVGVAVADL 181
Query: 385 ATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHA 444
TG+YA ++AA +H+ +TG+GQ ID LL TQV+ L N NYL +G +R GT+H
Sbjct: 182 MTGMYAVSGILAAAVHREQTGEGQHIDLALLDTQVAWLANQAQNYLVSGTSPERQGTAHP 241
Query: 445 NVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
N+VP+Q S+GY + G+D Q+Q C++ L +A DP Y T
Sbjct: 242 NIVPYQAVPASDGYFMLAVGNDTQFQKFCQIAGLDEVAQDPAYAT 286
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 1/139 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C++ L +A DP Y T RV+ R L +EA T K WL P +N
Sbjct: 269 FCQIAGLDEVAQDPAYATNQGRVKARATLVPLVEATTATKPAAWWLEKLSDAHVPCGPIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD +Q +V + H + G ++ V + +S + PP LGEHT VL+
Sbjct: 329 DLAQVFADPQVQARGMVVDQQHPRAGTVRTVKNPLVFSQSPLAYEQGPPVLGEHTAEVLR 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
L+ D I +L+ ++
Sbjct: 389 K-LDKDAEEIERLRAAGVI 406
>gi|421748469|ref|ZP_16186062.1| acyl-CoA transferase [Cupriavidus necator HPC(L)]
gi|409772806|gb|EKN54733.1| acyl-CoA transferase [Cupriavidus necator HPC(L)]
Length = 406
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 134/282 (47%), Positives = 187/282 (66%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
LS++R+LDLTR++AGP+C LAD GA+VIK+E+P GD+ R WGPP+L + T +
Sbjct: 4 LSHLRVLDLTRVLAGPWCAQNLADFGADVIKIERPGAGDDTRTWGPPWLQDESGRDTAEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV D TPEGQQ++++LA Q DV++EN+ G+L + L Y+ L +
Sbjct: 64 AYYLAANRNKRSVTCDISTPEGQQLVRELAAQSDVVLENYKVGQLKKYGLDYESLKAVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
LIYCSVTGFG GPY RPGYD I +GG + +TG P G P K G+A DL TG
Sbjct: 124 DLIYCSVTGFGQTGPYAARPGYDFIIQGMGGFMSLTGERDDLPGGGPQKAGVAISDLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
YA AV+AAL H+ +TG+GQ ID LL QV+ML N+ NYL +G+ KRWG +H N+V
Sbjct: 184 QYATIAVLAALAHRDRTGEGQYIDMALLDVQVAMLANMNTNYLASGVAPKRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+ ++G++ + G+D Q++ + L+ DPR+ T
Sbjct: 244 PYQTFQAADGWIIVAVGNDGQFRKFVEAGGRPELSADPRFAT 285
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 68/131 (51%)
Query: 9 HLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFAD 68
L+ DPR+ T RV NR+ L + +T +W+ + P +N++ VF D
Sbjct: 276 ELSADPRFATNPQRVANRDTLVPMLAEMVRPRTRAQWIADLEAAGVPCGPINTLDDVFED 335
Query: 69 EHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDET 128
++ L ++ H G++K+VG + S T P+ PP LGEHTD VL ++L Y
Sbjct: 336 AQVKARGLRVDLPHPSAGEVKLVGSPIKMSATPPQAVRHPPLLGEHTDAVLGEMLGYSPE 395
Query: 129 TIAKLKEKKIL 139
IA+L+ + +L
Sbjct: 396 RIAELRARGVL 406
>gi|83310586|ref|YP_420850.1| acyl-CoA transferase/carnitine dehydratase [Magnetospirillum
magneticum AMB-1]
gi|82945427|dbj|BAE50291.1| Predicted acyl-CoA transferase/carnitine dehydratase
[Magnetospirillum magneticum AMB-1]
Length = 401
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 136/278 (48%), Positives = 183/278 (65%), Gaps = 3/278 (1%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE---LSTY 273
LS++RILDL+R++AGP+ LLAD+GAEV+K+E+P GD+ R WGPPFL+ E S Y
Sbjct: 5 LSHLRILDLSRVLAGPWAGQLLADMGAEVLKIEKPGEGDDTRAWGPPFLDADEGRGESAY 64
Query: 274 FTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQL 333
+ NR K SV +DF P+GQ +++ L QCDV++ENF G L + L Y L I L
Sbjct: 65 YLSANRGKHSVTIDFTQPQGQALVRRLVAQCDVVLENFKVGGLAKYGLDYDSLKAIKPDL 124
Query: 334 IYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGA 393
+YCS+TGFG GPY R GYD + +GGL+ +TG PDG P KVG+A D+ TG+YA A
Sbjct: 125 VYCSITGFGQDGPYAQRAGYDFLVQGMGGLMSLTGTPDGEPMKVGVALTDIFTGMYAGFA 184
Query: 394 VMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFK 453
V+AAL H+ +TG+GQ ID LL QV++L N NYL G+ KR G SH N+VP+Q F
Sbjct: 185 VLAALAHRDRTGEGQHIDLALLDVQVAVLANQATNYLVGGVIPKRLGNSHPNIVPYQAFA 244
Query: 454 TSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
T+ G++ + G+D Q++ C+V L DP Y T A
Sbjct: 245 TAEGHIILAIGNDAQFRRFCEVAGHPELGTDPLYATNA 282
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 64/139 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V L DP Y T A RV +R +L + E + W+ + P +N
Sbjct: 263 FCEVAGHPELGTDPLYATNADRVRHRAILVPVLVEIMTEHDADYWIAELEKAGVPCGPIN 322
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
S+ +VFAD ++ + + H + D+++V + S T PPP LG TD VL
Sbjct: 323 SLDRVFADPQVKHRGMAVAMEHPQREDLRLVANPIHLSKTPVTYDRPPPLLGADTDDVLA 382
Query: 121 DLLNYDETTIAKLKEKKIL 139
LL DE A+L+ ++
Sbjct: 383 RLLGLDEGERAELRSSGVI 401
>gi|407773185|ref|ZP_11120486.1| putative lipid metabolism-related protein [Thalassospira
profundimaris WP0211]
gi|407283649|gb|EKF09177.1| putative lipid metabolism-related protein [Thalassospira
profundimaris WP0211]
Length = 407
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 138/294 (46%), Positives = 191/294 (64%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS +R+LDL+R++AGP+ + LAD+GAEVIK+E+P GD+ R WGPPF N+T +
Sbjct: 5 LSGLRVLDLSRVLAGPWASQTLADMGAEVIKIERPGAGDDTRGWGPPFAKDASGNDTTEA 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NR KKS+ +D PEGQ+I+++LA + DV++ENF G L + L Y LS++N
Sbjct: 65 AYYLTANRGKKSLTIDITKPEGQEIVRNLAAESDVVLENFKVGGLAKYGLDYATLSKVNP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
L+YCS+TGFG GPYKDRPGYD + +GGL+ ITG PD G P KVG+A D+ TG
Sbjct: 125 NLVYCSITGFGQDGPYKDRPGYDFMIQGMGGLMSITGAPDSAPGGQPMKVGVAVADIFTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA ++AAL H+ TG+GQ ID LL Q ++L N NYL G R G +H N+V
Sbjct: 185 LYATIGILAALRHRDATGEGQYIDLALLDVQTAVLANQAMNYLATGNAPGRLGNAHPNIV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P++ F T++GY+ + G+D Q++ C V L L LD RY T +A + L+
Sbjct: 245 PYEAFPTADGYLILAVGNDSQFKSFCAVAGLDALPLDERYATNRNRVANRTELV 298
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 71/139 (51%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C V L L LD RY T RV NR L I + KTT+ W+ + + P +N
Sbjct: 269 FCAVAGLDALPLDERYATNRNRVANRTELVPLIRQAMVAKTTDAWIDALEKANVPCGPIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ +VF + +Q +VK+++H G + V + +S T PP LG+H+D +L+
Sbjct: 329 TLDRVFENPQVQHRGMVKQLAHPTAGTVPTVANPIKFSKTPITDEKAPPMLGQHSDEILR 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ + + IAKL++ I+
Sbjct: 389 KVADLSDDQIAKLRDAGIV 407
>gi|189350178|ref|YP_001945806.1| formyl-CoA transferase [Burkholderia multivorans ATCC 17616]
gi|421480414|ref|ZP_15928040.1| CoA-transferase family III protein [Burkholderia multivorans CF2]
gi|189334200|dbj|BAG43270.1| formyl-CoA transferase [Burkholderia multivorans ATCC 17616]
gi|400221142|gb|EJO51624.1| CoA-transferase family III protein [Burkholderia multivorans CF2]
Length = 406
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 136/282 (48%), Positives = 186/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
LS++R+LDLTR++AGP+C LAD GA+VIK+E+P GD+ R WGPP+L + T +
Sbjct: 4 LSHIRVLDLTRVLAGPWCAQTLADFGADVIKIERPGAGDDTRHWGPPYLKDAHGADTAEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV VD TPEGQQI+++LA Q DV++EN+ G+L + L Y L +
Sbjct: 64 AYYLAANRNKRSVTVDIATPEGQQIVRELAAQSDVVLENYKVGQLKKYGLDYASLRAVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCSVTGFG GPY R GYD I IGG + ITG P G P K G+A DLATG
Sbjct: 124 DLVYCSVTGFGQTGPYAHRAGYDFIVQGIGGFMSITGERDGVPGGGPQKAGVAIADLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ AV+AAL H+ +TG+GQ ID LL QV++L N+ N+L +G RWG +H N+V
Sbjct: 184 LYSTIAVLAALAHRDRTGEGQYIDMALLDVQVALLANMNTNFLASGTPPVRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+TS+G++ + G+D Q++ + LA D R+ T
Sbjct: 244 PYQTFQTSDGWIIVAVGNDGQFRKFVEAGGRPELADDERFAT 285
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 68/130 (52%)
Query: 10 LALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADE 69
LA D R+ T RV +R+ L + ++ W+ + P +N +++VFA+E
Sbjct: 277 LADDERFATNPARVRHRDTLVPILAEMVKTRSKTAWIDALEAAGVPCGPINDLAEVFANE 336
Query: 70 HIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETT 129
+ + + H D+K+V V S T P+ RT PP LG HTD VL+D+L YD+
Sbjct: 337 QVVARGMEVALPHPCGADVKLVRNPVRMSATPPDARTAPPLLGAHTDDVLRDMLGYDDAR 396
Query: 130 IAKLKEKKIL 139
IA LK K+ +
Sbjct: 397 IAALKAKQAI 406
>gi|254252620|ref|ZP_04945938.1| hypothetical protein BDAG_01857 [Burkholderia dolosa AUO158]
gi|124895229|gb|EAY69109.1| hypothetical protein BDAG_01857 [Burkholderia dolosa AUO158]
Length = 406
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 136/282 (48%), Positives = 187/282 (66%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
LS++R+LDLTR++AGP+C LAD GA+VIK+E+P GD+ R WGPP+L + T +
Sbjct: 4 LSHIRVLDLTRVLAGPWCAQTLADFGADVIKIERPGAGDDTRHWGPPYLKDASGADTAEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV VD TPEGQQI+++LA Q DV++EN+ G+L + L Y L ++
Sbjct: 64 AYYLAANRNKRSVTVDIATPEGQQIVRELAAQSDVVLENYKVGQLKKYGLDYDSLRDVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHIT----GHPDGPPCKVGIASIDLATG 387
L+YCSVTGFG GPY R GYD I IGG + IT G P G P K G+A DLATG
Sbjct: 124 DLVYCSVTGFGQTGPYAHRAGYDFIVQGIGGFMSITGERDGEPGGGPQKAGVAIADLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ AV+AAL H+ +TG+GQ ID LL QV++L N+ N+L +G RWG +H N+V
Sbjct: 184 LYSTIAVLAALAHRDRTGEGQYIDMALLDVQVALLANMNTNFLASGKPPVRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+TS+G++ + G+D Q++ + LA D R+ T
Sbjct: 244 PYQTFQTSDGWIIVAVGNDGQFRKFVEAGGRPELADDARFST 285
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 68/131 (51%)
Query: 9 HLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFAD 68
LA D R+ T RV +R+ L + ++ EW+ + P +N +++VF +
Sbjct: 276 ELADDARFSTNPSRVRHRDTLVPILAEMVKVRSKAEWIDALEAAGVPCGPINDLAEVFDN 335
Query: 69 EHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDET 128
E + + + H D+K+V + S T P+ R+ PP LGE T+ VL+D+L YD+
Sbjct: 336 EQVVARGMQVSLPHPCGADVKLVRNPIRMSATPPDARSAPPLLGEQTEAVLRDMLGYDDE 395
Query: 129 TIAKLKEKKIL 139
IA L+ K+ +
Sbjct: 396 RIATLRAKQAI 406
>gi|149032523|gb|EDL87401.1| similar to cDNA sequence AF397014, isoform CRA_a [Rattus
norvegicus]
Length = 266
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 137/231 (59%), Positives = 172/231 (74%), Gaps = 2/231 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL VRILDLTR++AGPF TM L DLGAEVIKVE+P GD+ R WGPPF+N TE STYF
Sbjct: 38 PLEGVRILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRSWGPPFVN-TE-STYFL 95
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNKKS+ V+ K P G +I+K+LA CDV VEN+VPGKL + LGY + +I ++Y
Sbjct: 96 SVNRNKKSIAVNIKDPRGVRIVKELAAICDVFVENYVPGKLSEMGLGYADIDKIAPHIVY 155
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+G GP R GYD IA+++ GL+HITG DG P + G+A DLATGL+A+GA+M
Sbjct: 156 CSITGYGQTGPMSHRAGYDAIASAMSGLMHITGPEDGDPVRPGVAMTDLATGLFAYGAIM 215
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANV 446
A L+ +Y+TGKG IDCNLLS+QV+ L V ANYL E KRWGT+H ++
Sbjct: 216 AGLIQRYRTGKGLFIDCNLLSSQVACLTQVAANYLIGQKEAKRWGTAHGSL 266
>gi|410610696|ref|ZP_11321804.1| CaiB/baiF CoA-transferase family protein [Glaciecola psychrophila
170]
gi|410169653|dbj|GAC35693.1| CaiB/baiF CoA-transferase family protein [Glaciecola psychrophila
170]
Length = 407
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 137/285 (48%), Positives = 188/285 (65%), Gaps = 9/285 (3%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL--- 270
S PLS++R+L+L+RI+AGP+ +LADLGAE+IKVE+P+ GD+ R WGPP+LNN +
Sbjct: 2 SSPLSHIRVLELSRILAGPWAGQMLADLGAEIIKVEKPIQGDDTRHWGPPYLNNQQSEAP 61
Query: 271 --STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSE 328
S YF NR K+S+ +D + P+GQ II L + CDVL+ENF G L + +L Y LS
Sbjct: 62 TESAYFLSANRGKRSITIDIRQPKGQAIIHQLIESCDVLIENFKVGSLQKYHLDYASLSA 121
Query: 329 INSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDL 384
IN QLIYCS+TGFG GPY R GYD + +GGL+ +TG PD G P KVG+A D+
Sbjct: 122 INPQLIYCSITGFGQNGPYAQRAGYDFLLQGMGGLMSVTGEPDHLPGGGPQKVGVALTDI 181
Query: 385 ATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHA 444
TG+YA A+ AA++ + K+ GQ ID LL QV+ L N NYL + KR G +H
Sbjct: 182 LTGMYATTAIQAAIIEREKSRLGQHIDLALLDVQVACLANQAMNYLVSDETPKRMGNAHP 241
Query: 445 NVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
N+VP+Q F+T++G++ + G+D Q+ C+V Q L DPR+ T
Sbjct: 242 NIVPYQTFQTADGFIILTIGNDSQFAGFCEVAQCQALIQDPRFTT 286
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 75/139 (53%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V Q L DPR+ T RV NRE++ +++ K +E WL + P +N
Sbjct: 269 FCEVAQCQALIQDPRFTTNQARVRNREIVIEKLANIIQAKDSEFWLQQLETKGVPCGPIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I+QVF + I+ K++ E++H K G + + + +S T PP LGEHT+ VL
Sbjct: 329 DIAQVFENPQIKHRKILGELTHPKNGKVPTIKNPINFSRTPIVYNQAPPNLGEHTEDVLT 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
+LL YD + I KL++ ++
Sbjct: 389 ELLEYDASAINKLRQSNVI 407
>gi|359796972|ref|ZP_09299562.1| CoA-transferase [Achromobacter arsenitoxydans SY8]
gi|359365046|gb|EHK66753.1| CoA-transferase [Achromobacter arsenitoxydans SY8]
Length = 409
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 135/289 (46%), Positives = 192/289 (66%), Gaps = 10/289 (3%)
Query: 210 SENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL---- 265
S+ P+ PL+ +R+LDLTR++AGP+CT LADLGAEVIK+E+P GD+ R WGPP+L
Sbjct: 2 SQRPA-PLTGIRVLDLTRVLAGPWCTQNLADLGAEVIKIERPGAGDDTRAWGPPYLKDEA 60
Query: 266 -NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYK 324
++T + Y+ NRNK SV +D +P G Q++++LA Q D+LVENF G L + L Y
Sbjct: 61 GHDTTEAAYYLSANRNKMSVALDIASPRGAQLVRELALQSDILVENFKVGGLSKYGLDYA 120
Query: 325 HLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIA 380
L E+N +LIYCS+TGFG GPY RPGYD + +GGL+ ITG P G P K G+A
Sbjct: 121 SLKELNPRLIYCSITGFGQTGPYASRPGYDFMIQGMGGLMSITGERDDLPGGGPQKAGVA 180
Query: 381 SIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWG 440
DL TG+Y+ ++AAL + ++G GQ ID LL QV+ML N N++ +G +R G
Sbjct: 181 VADLMTGMYSTVGILAALHERARSGLGQHIDMALLDCQVAMLANQNLNFMTSGTAPRRAG 240
Query: 441 TSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+H N+VP+QVF S+G++ + G+D Q+++ C + L L+ DPR+ T
Sbjct: 241 NAHQNLVPYQVFAASDGHLIVAVGNDSQFRNYCGAIGLPELSADPRFST 289
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 66/136 (48%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C + L L+ DPR+ T RV+NRE L + + + WL +GV P +N+
Sbjct: 273 CGAIGLPELSADPRFSTNPQRVKNREELVPLLAERMATGERDHWLAALEGVGVPAGPINT 332
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
+ QV+ D H+ + +E+ H G + + + +S + E R PP LGEHT+ VL +
Sbjct: 333 LDQVYEDPHVLARGMKRELPHPAAGVVPMASSPLKFSGSPVEYRRAPPMLGEHTEQVLSE 392
Query: 122 LLNYDETTIAKLKEKK 137
L I L + +
Sbjct: 393 KLGLSAEEIQALAQSR 408
>gi|23098320|ref|NP_691786.1| hypothetical protein OB0865 [Oceanobacillus iheyensis HTE831]
gi|22776546|dbj|BAC12821.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 381
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 139/278 (50%), Positives = 187/278 (67%), Gaps = 2/278 (0%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTY 273
S+ L ++ILDLTR++AGP+CTM+LADLGAEVIKVE P DE R WGPPF + +S Y
Sbjct: 2 SMSLEGLKILDLTRVLAGPYCTMILADLGAEVIKVEAPGGSDETRDWGPPFQHG--VSAY 59
Query: 274 FTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQL 333
+ C NRNKKS+ +D K+ G +K+L K+ DV+V NF G ++R L Y+ LS +N +
Sbjct: 60 YLCANRNKKSITIDLKSSSGIHYLKELVKESDVIVNNFKSGTMERFGLDYQTLSTLNPSI 119
Query: 334 IYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGA 393
IY S+TGFG GPYKD PGYD I ++ GL+ ITG P+ P KVGIA D+ TGLY
Sbjct: 120 IYASITGFGETGPYKDMPGYDFIIQAMSGLMSITGSPESGPQKVGIAITDVLTGLYTCIG 179
Query: 394 VMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFK 453
+ AALL + ++GKGQKID +L T VS L+NV +NYL +G K G +H N+VP+Q FK
Sbjct: 180 IQAALLERQQSGKGQKIDISLYDTAVSSLVNVASNYLMSGQNPKSLGNNHPNIVPYQTFK 239
Query: 454 TSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
T + + I G+D Q++ +C ++ L L D R+ T A
Sbjct: 240 TEDKDIVIAVGNDAQFKRLCHILQLDDLLNDNRFRTNA 277
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ L L D R+ T A RV++R++L ++ + + + W+ Q P +
Sbjct: 258 LCHILQLDDLLNDNRFRTNASRVQHRDILIPLLQESLILQPADYWIKALQEEKIPCGPIQ 317
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEH-TDYV 118
+I ++ D +Q ++ + H+ G IK++G + +S T R PP GEH TDY+
Sbjct: 318 TIDKLPKDPQLQSREMFVSMHHQTAGPIKLIGNPLKFSRTPITYRHAPPNPGEHNTDYI 376
>gi|126438719|ref|YP_001058676.1| CAIB/BAIF family protein [Burkholderia pseudomallei 668]
gi|167738943|ref|ZP_02411717.1| CAIB/BAIF family protein [Burkholderia pseudomallei 14]
gi|167816162|ref|ZP_02447842.1| CAIB/BAIF family protein [Burkholderia pseudomallei 91]
gi|167824535|ref|ZP_02456006.1| CAIB/BAIF family protein [Burkholderia pseudomallei 9]
gi|167846069|ref|ZP_02471577.1| CAIB/BAIF family protein [Burkholderia pseudomallei B7210]
gi|167894640|ref|ZP_02482042.1| CAIB/BAIF family protein [Burkholderia pseudomallei 7894]
gi|167903048|ref|ZP_02490253.1| CAIB/BAIF family protein [Burkholderia pseudomallei NCTC 13177]
gi|167911281|ref|ZP_02498372.1| CAIB/BAIF family protein [Burkholderia pseudomallei 112]
gi|254188522|ref|ZP_04895033.1| CAIB/BAIF family protein [Burkholderia pseudomallei Pasteur 52237]
gi|418387623|ref|ZP_12967472.1| CAIB/BAIF family protein [Burkholderia pseudomallei 354a]
gi|418553664|ref|ZP_13118480.1| CAIB/BAIF family protein [Burkholderia pseudomallei 354e]
gi|126218212|gb|ABN81718.1| CAIB/BAIF family protein [Burkholderia pseudomallei 668]
gi|157936201|gb|EDO91871.1| CAIB/BAIF family protein [Burkholderia pseudomallei Pasteur 52237]
gi|385371320|gb|EIF76507.1| CAIB/BAIF family protein [Burkholderia pseudomallei 354e]
gi|385376192|gb|EIF80897.1| CAIB/BAIF family protein [Burkholderia pseudomallei 354a]
Length = 406
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 136/282 (48%), Positives = 189/282 (67%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
LS++R+LDL+R++AGP+C LADLGA+VIKVE+P GD+ R WGPP+L +T +
Sbjct: 4 LSHIRVLDLSRVLAGPWCAQTLADLGADVIKVERPECGDDTRHWGPPYLKTPDGADTREA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV VD TPEGQ+II++LA QCDV++EN+ G+L + L Y L+ +
Sbjct: 64 AYYLAANRNKRSVTVDIATPEGQRIIRELAAQCDVVLENYKVGQLAKYGLDYASLAAVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCSVTGFG GPY R GYD I +GG + ITG P G P K G+A DLATG
Sbjct: 124 GLVYCSVTGFGQTGPYAHRAGYDFIIQGMGGFMSITGERDGLPGGGPQKAGVAIADLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ +TG+GQ ID LL QV++L N+ N+L +G RWG +H N+V
Sbjct: 184 LYSTIAILAALAHRDRTGEGQHIDMALLDVQVALLANMNTNFLASGKPPVRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+TS+G++ + G+D Q++ + LA D R+ T
Sbjct: 244 PYQTFETSDGWIIVAVGNDGQFRKFVEAGGRPELADDERFAT 285
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 73/130 (56%)
Query: 10 LALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADE 69
LA D R+ T RV +R+ L + A T +T EWL + + P +N +++VF DE
Sbjct: 277 LADDERFATNPARVRHRDTLVPIVAAMTKTRTKREWLDALEALGVPCGPINDLAEVFDDE 336
Query: 70 HIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETT 129
++ + ++ H K+V + S T P+ R+ PP LGEHTD VL+D+L Y +
Sbjct: 337 QVRARGMQVDLPHPSGASAKLVRNPIRMSATPPDARSAPPLLGEHTDAVLRDMLGYGDAA 396
Query: 130 IAKLKEKKIL 139
IA L++K+++
Sbjct: 397 IAALRDKRVV 406
>gi|124385006|ref|YP_001026454.1| CAIB/BAIF family protein [Burkholderia mallei NCTC 10229]
gi|126450564|ref|YP_001080271.1| CAIB/BAIF family protein [Burkholderia mallei NCTC 10247]
gi|126455081|ref|YP_001065929.1| CAIB/BAIF family protein [Burkholderia pseudomallei 1106a]
gi|167001587|ref|ZP_02267382.1| CAIB/BAIF family protein [Burkholderia mallei PRL-20]
gi|167719940|ref|ZP_02403176.1| CAIB/BAIF family protein [Burkholderia pseudomallei DM98]
gi|254205879|ref|ZP_04912231.1| CAIB/BAIF family protein [Burkholderia mallei JHU]
gi|254258287|ref|ZP_04949341.1| CAIB/BAIF family protein [Burkholderia pseudomallei 1710a]
gi|386862046|ref|YP_006274995.1| CAIB/BAIF family protein [Burkholderia pseudomallei 1026b]
gi|418534195|ref|ZP_13100042.1| CAIB/BAIF family protein [Burkholderia pseudomallei 1026a]
gi|418541244|ref|ZP_13106737.1| CAIB/BAIF family protein [Burkholderia pseudomallei 1258a]
gi|418547484|ref|ZP_13112638.1| CAIB/BAIF family protein [Burkholderia pseudomallei 1258b]
gi|124293026|gb|ABN02295.1| CAIB/BAIF family protein [Burkholderia mallei NCTC 10229]
gi|126228723|gb|ABN92263.1| CAIB/BAIF family protein [Burkholderia pseudomallei 1106a]
gi|126243434|gb|ABO06527.1| CAIB/BAIF family protein [Burkholderia mallei NCTC 10247]
gi|147753322|gb|EDK60387.1| CAIB/BAIF family protein [Burkholderia mallei JHU]
gi|243062692|gb|EES44878.1| CAIB/BAIF family protein [Burkholderia mallei PRL-20]
gi|254216976|gb|EET06360.1| CAIB/BAIF family protein [Burkholderia pseudomallei 1710a]
gi|385358539|gb|EIF64534.1| CAIB/BAIF family protein [Burkholderia pseudomallei 1258a]
gi|385359538|gb|EIF65493.1| CAIB/BAIF family protein [Burkholderia pseudomallei 1026a]
gi|385360963|gb|EIF66866.1| CAIB/BAIF family protein [Burkholderia pseudomallei 1258b]
gi|385659174|gb|AFI66597.1| CAIB/BAIF family protein [Burkholderia pseudomallei 1026b]
Length = 406
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 136/282 (48%), Positives = 189/282 (67%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
LS++R+LDL+R++AGP+C LADLGA+VIKVE+P GD+ R WGPP+L +T +
Sbjct: 4 LSHIRVLDLSRVLAGPWCAQTLADLGADVIKVERPECGDDTRHWGPPYLKTPDGADTREA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV VD TPEGQ+II++LA QCDV++EN+ G+L + L Y L+ +
Sbjct: 64 AYYLAANRNKRSVTVDIATPEGQRIIRELAAQCDVVLENYKVGQLAKYGLDYASLAAVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCSVTGFG GPY R GYD I +GG + ITG P G P K G+A DLATG
Sbjct: 124 GLVYCSVTGFGQTGPYAHRAGYDFIIQGMGGFMSITGERDGLPGGGPQKAGVAIADLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ +TG+GQ ID LL QV++L N+ N+L +G RWG +H N+V
Sbjct: 184 LYSTIAILAALAHRDRTGEGQHIDMALLDVQVALLANMNTNFLASGKPPVRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+TS+G++ + G+D Q++ + LA D R+ T
Sbjct: 244 PYQTFETSDGWIIVAVGNDGQFRKFVEAGGRPELADDERFAT 285
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 73/130 (56%)
Query: 10 LALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADE 69
LA D R+ T RV +R+ L + A T +T EWL + + P +N +++VF DE
Sbjct: 277 LADDERFATNPARVRHRDTLVPIVAAMTKTRTKREWLDALEALGVPCGPINDLAEVFDDE 336
Query: 70 HIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETT 129
++ + ++ H K+V + S T P+ R+ PP LGEHTD VL+DLL Y +
Sbjct: 337 QVRARGMQVDLPHPSGASAKLVRNPIRMSATPPDARSAPPLLGEHTDAVLRDLLGYGDAA 396
Query: 130 IAKLKEKKIL 139
IA L++K+++
Sbjct: 397 IAALRDKRVV 406
>gi|219847211|ref|YP_002461644.1| L-carnitine dehydratase/bile acid-inducible protein F [Chloroflexus
aggregans DSM 9485]
gi|219541470|gb|ACL23208.1| L-carnitine dehydratase/bile acid-inducible protein F [Chloroflexus
aggregans DSM 9485]
Length = 392
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 131/263 (49%), Positives = 179/263 (68%), Gaps = 1/263 (0%)
Query: 227 RIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTCVNRNKKSVCV 286
R++AGP+ TM+LADLGA V+K+EQP GDE R+WGPPF N LS YF VNRNK+SV +
Sbjct: 15 RVLAGPYATMVLADLGARVVKIEQPGIGDETRQWGPPFAANG-LSAYFIAVNRNKQSVAI 73
Query: 287 DFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGP 346
K P GQ I++ LA++ DVL+ENF+PG + R+ LGY L +N LIYCS+TG+G GP
Sbjct: 74 TLKHPTGQAIVRALAQRADVLIENFLPGTMARMGLGYDDLRVLNPGLIYCSITGYGQYGP 133
Query: 347 YKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGK 406
RPGYD + + GGL+ ITG P+GPP K G+A D+ TGLYA +++AAL ++ TG+
Sbjct: 134 DAARPGYDTVIQAEGGLMSITGEPNGPPLKTGVAVADITTGLYAATSILAALHYRTLTGE 193
Query: 407 GQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSD 466
GQ ID L Q+S L NV + YL +G +R+G HA +VP+Q F ++GY+ I G+D
Sbjct: 194 GQYIDLALFDVQLSWLANVASAYLVSGKPPQRYGNGHATIVPYQPFAAADGYIMIAVGND 253
Query: 467 KQYQDMCKVMNLQHLALDPRYLT 489
+Q++ C +N A D R+ T
Sbjct: 254 RQFERFCTALNHPEWASDERFAT 276
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 64/143 (44%), Gaps = 9/143 (6%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C +N A D R+ T RV +R++L I A + + W+ + P VN
Sbjct: 259 FCTALNHPEWASDERFATNPARVAHRDVLVPLIAAVIVREPVAIWIERLRAADVPCGPVN 318
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I Q +V++++ I +VGPA S T +RT PPA G TD VL+
Sbjct: 319 DIPTALHSRQAQARAMVQQVA-----GIPMVGPAAKLSATPATIRTAPPARGADTDAVLR 373
Query: 121 DLLNYDETTIAKLKEKKILGLIE 143
+L + +L ++ G+IE
Sbjct: 374 ELGYAPD----QLAAWRVDGVIE 392
>gi|293603533|ref|ZP_06685954.1| formyl-CoA transferase [Achromobacter piechaudii ATCC 43553]
gi|292817969|gb|EFF77029.1| formyl-CoA transferase [Achromobacter piechaudii ATCC 43553]
Length = 407
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 136/285 (47%), Positives = 188/285 (65%), Gaps = 9/285 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L +R+LDL+RI+AGP+CT LADLGA+VIK+E+P+ GD+ R WGPP+L +T S
Sbjct: 7 LDGIRVLDLSRILAGPWCTQNLADLGADVIKIERPLVGDDTRAWGPPYLKDGDGQDTSES 66
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV D TPEG +I++LA D+LVENF G L + L Y L IN
Sbjct: 67 AYYLSANRNKRSVEADMATPEGAALIRELAAVSDILVENFKVGGLAKYGLDYDSLKAINP 126
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+LIYCSVTGFG GPY RPGYD + +GGL+ ITG P G P K G+A D+ TG
Sbjct: 127 RLIYCSVTGFGQDGPYAQRPGYDFMIQGMGGLMSITGERDDLPGGGPQKAGVAVTDIVTG 186
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA A++AAL ++++G GQ +D LL + V++L N +NY N+G+ R G +H NVV
Sbjct: 187 MYATVAILAALQERHRSGLGQHLDIALLDSHVALLANQNSNYFNSGVAPSRAGNAHQNVV 246
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
P+QVF S+G++ + TG++ QY+ C+ + + L DPR+ T L
Sbjct: 247 PYQVFAASDGHLIVATGNESQYRAYCRAIGVPELGDDPRFATNRL 291
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C+ + + L DPR+ T LRV NRE+L + + ++ ++W+ + V P +N
Sbjct: 272 CRAIGVPELGDDPRFATNRLRVTNREVLIELLTTIMLQGRRDDWIDKLEAVGVPCGPIND 331
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
I+Q FA Q +L +EI H + + +S + R PP LGEHT+ VL++
Sbjct: 332 IAQSFAHPQSQARQLRREIPHPLGVTAPVTASPLRFSDSPVVYRRAPPLLGEHTEQVLRE 391
Query: 122 LLNYDETTIAKLKEKK 137
+L I K +
Sbjct: 392 VLGKSPEAIEAFKRPR 407
>gi|119898214|ref|YP_933427.1| hypothetical protein azo1923 [Azoarcus sp. BH72]
gi|119670627|emb|CAL94540.1| conserved hypothetical protein [Azoarcus sp. BH72]
Length = 407
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 140/282 (49%), Positives = 184/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+RI+AGP+ LLADLGA+VIKVE+P GD+ R WGPPFL NT ++
Sbjct: 5 LSHIRVLDLSRILAGPWAGQLLADLGADVIKVERPGAGDDTRGWGPPFLKDEQGENTPVA 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ C NRNK+S+ +D PEGQ ++K LA + DV++ENF G L + L Y L IN
Sbjct: 65 AYYLCANRNKRSITIDITRPEGQALVKQLAAESDVVLENFKLGGLAQYGLDYAALKAINP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG PD G P KVG+A D+ TG
Sbjct: 125 RLIYCSITGFGQDGPYAPRAGYDFLIQGLGGLMSLTGRPDDEEGGGPMKVGVALTDILTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA AV+AAL + K+G+GQ ID LL Q++ L N NYL G KR G +H N+V
Sbjct: 185 LYATNAVLAALAWREKSGEGQFIDLALLDVQIACLANQAMNYLTTGQNPKRLGNAHPNIV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F T++GY+ + G+D Q+ C LA DPRY T
Sbjct: 245 PYQDFPTADGYMILAIGNDGQFARFCTEAGAPELAADPRYAT 286
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 72/139 (51%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C LA DPRY T RVENR L ++ T+E++T +W+ + ++ P +N
Sbjct: 269 FCTEAGAPELAADPRYATNKARVENRNTLIPALKRLTIERSTADWVAALEALAVPCGPIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+++ VFAD +Q L + H G++ +V + S T E R PPP LG+HT+ +L
Sbjct: 329 TLADVFADPQVQARGLKVTMPHPLAGEVPLVANPLRLSATPVEYRNPPPLLGQHTEQILS 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
L T I +L+ ++
Sbjct: 389 TTLGLSATQIEELRAAGVI 407
>gi|294084933|ref|YP_003551693.1| CAIB/BAIF family protein [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292664508|gb|ADE39609.1| CAIB/BAIF family protein [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 409
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 135/279 (48%), Positives = 185/279 (66%), Gaps = 5/279 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TEL 270
PLS +R+LDL+RI+AGP CT L+ D GA++IKVE+P GD+ R WGPP++ T
Sbjct: 14 PLSGIRVLDLSRILAGPTCTQLMGDYGADIIKVEKPGLGDDTRSWGPPYVTGSDGVPTAE 73
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
S Y+ NRNK+S +D TPEG + ++ LA QCD++VENF G L + L Y ++ +N
Sbjct: 74 SAYYLSSNRNKRSFAIDITTPEGAETVRKLAAQCDIMVENFKVGGLAKYGLDYDAIAAVN 133
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYA 390
+IYC+++GFG GP PGYD++A + GG++ +TG PDG P KVG+A D+ GLYA
Sbjct: 134 PAIIYCAISGFGQTGPNAHLPGYDLLAQAFGGIMSLTGAPDGEPMKVGVAVADVVCGLYA 193
Query: 391 HGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQ 450
AV+AAL H+ KTG+GQ ID L TQV+ LIN G NYL +G +R G +H N+VP+Q
Sbjct: 194 CTAVLAALQHRNKTGEGQYIDIGLADTQVAWLINNGTNYLISGQPPQRLGNAHPNIVPYQ 253
Query: 451 VFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
VF T +G++ + G+D QY CKV+ LA YLT
Sbjct: 254 VFATIDGHIIVAAGNDTQYARFCKVIGRADLATHNDYLT 292
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
CKV+ LA YLT RV+NR++L + A+ + TT E + + P +N
Sbjct: 275 FCKVIGRADLATHNDYLTNMNRVKNRDVLVPILTAEIAKLTTAEMVAKMEQYGVPGGAIN 334
Query: 61 SISQVFADEHI--QDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
++ +VF E + +++K+ + K G I ++G V +S T R PP GEH+ +
Sbjct: 335 TLPEVFESEQVTTREMKISMPHATAKSGKIDLIGNPVKFSRTPVSYRHSPPTCGEHSAEI 394
Query: 119 LKDLL 123
+LL
Sbjct: 395 TAELL 399
>gi|53719622|ref|YP_108608.1| lipid metabolism-like protein [Burkholderia pseudomallei K96243]
gi|52210036|emb|CAH36009.1| putative lipid metabolism-related protein [Burkholderia
pseudomallei K96243]
Length = 406
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 136/282 (48%), Positives = 189/282 (67%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
LS++R+LDL+R++AGP+C LADLGA+VIKVE+P GD+ R WGPP+L +T +
Sbjct: 4 LSHIRVLDLSRVLAGPWCAQTLADLGADVIKVERPECGDDTRHWGPPYLKTPDGADTREA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV VD TPEGQ+II++LA QCDV++EN+ G+L + L Y L+ +
Sbjct: 64 AYYLAANRNKRSVTVDIATPEGQRIIRELAAQCDVVLENYKVGQLAKYGLDYASLAAVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCSVTGFG GPY R GYD I +GG + ITG P G P K G+A DLATG
Sbjct: 124 GLVYCSVTGFGQTGPYAHRAGYDFIIQGMGGFMSITGERDGLPGGGPQKAGVAIADLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ +TG+GQ ID LL QV++L N+ N+L +G RWG +H N+V
Sbjct: 184 LYSTIAILAALAHRDRTGEGQHIDMALLDVQVALLANMNTNFLASGKPPVRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+TS+G++ + G+D Q++ + LA D R+ T
Sbjct: 244 PYQTFETSDGWIIVAVGNDGQFRKFVEAGGRPELADDERFAT 285
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 72/130 (55%)
Query: 10 LALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADE 69
LA D R+ T RV +R+ L + A T +T EWL + P +N +++VF DE
Sbjct: 277 LADDERFATNPARVRHRDTLVPIVAAMTKTRTKREWLDALDPLGVPCGPINDLAEVFDDE 336
Query: 70 HIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETT 129
++ + ++ H K+V + S T P+ R+ PP LGEHTD VL+D+L Y +
Sbjct: 337 QVRARGMQVDLPHPSGASAKLVRNPIRMSATPPDARSAPPLLGEHTDAVLRDMLGYGDAA 396
Query: 130 IAKLKEKKIL 139
IA L++K+++
Sbjct: 397 IAALRDKRVV 406
>gi|149032524|gb|EDL87402.1| similar to cDNA sequence AF397014, isoform CRA_b [Rattus
norvegicus]
Length = 274
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 138/234 (58%), Positives = 171/234 (73%), Gaps = 2/234 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL VRILDLTR++AGPF TM L DLGAEVIKVE+P GD+ R WGPPF+N TE STYF
Sbjct: 38 PLEGVRILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRSWGPPFVN-TE-STYFL 95
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNKKS+ V+ K P G +I+K+LA CDV VEN+VPGKL + LGY + +I ++Y
Sbjct: 96 SVNRNKKSIAVNIKDPRGVRIVKELAAICDVFVENYVPGKLSEMGLGYADIDKIAPHIVY 155
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+G GP R GYD IA+++ GL+HITG DG P + G+A DLATGL+A+GA+M
Sbjct: 156 CSITGYGQTGPMSHRAGYDAIASAMSGLMHITGPEDGDPVRPGVAMTDLATGLFAYGAIM 215
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPH 449
A L+ +Y+TGKG IDCNLLS+QV+ L V ANYL E KRWGT+H H
Sbjct: 216 AGLIQRYRTGKGLFIDCNLLSSQVACLTQVAANYLIGQKEAKRWGTAHGTHKAH 269
>gi|350545059|ref|ZP_08914573.1| L-carnitine dehydratase/bile acid-inducible protein F [Candidatus
Burkholderia kirkii UZHbot1]
gi|350527168|emb|CCD38774.1| L-carnitine dehydratase/bile acid-inducible protein F [Candidatus
Burkholderia kirkii UZHbot1]
Length = 403
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 134/280 (47%), Positives = 183/280 (65%), Gaps = 9/280 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
+S++R+LDLTR++AGP+C LAD GA+VIK+E+P TGD+ R WGPP+L +T +
Sbjct: 1 MSDIRVLDLTRVLAGPWCAQTLADFGADVIKIERPETGDDTRHWGPPYLKTPEGEDTHEA 60
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV VD TP GQQI+++LA Q DV++EN+ G+L + L Y L +
Sbjct: 61 AYYLAANRNKRSVTVDIATPAGQQIVRELAAQSDVVLENYKAGQLKKYGLDYASLKAVKP 120
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHIT----GHPDGPPCKVGIASIDLATG 387
++YCSVTGFG GPY R GYD I IGG + IT G P G P K G+A DL TG
Sbjct: 121 DIVYCSVTGFGQTGPYASRAGYDFIVQGIGGFMSITGERDGQPGGGPQKAGVAIADLMTG 180
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA V+ AL H+ +TGKGQ ID LL QV+ML N+ NYL +G RWG +H N+V
Sbjct: 181 MYATIGVLTALAHRDRTGKGQYIDMALLDVQVAMLANMNTNYLASGKPPVRWGNAHPNIV 240
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
P+Q F+TS+G++ + G+D Q++ +V LA D R+
Sbjct: 241 PYQTFQTSDGWIIVAVGNDGQFRKFVEVGGRPELADDARF 280
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 69/139 (49%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V LA D R+ RV NR++L + K EW+ + P +N
Sbjct: 265 FVEVGGRPELADDARFAANPSRVRNRDVLVPILADMVRGKGKHEWIAELEAAGVPCGPIN 324
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ +VF D + ++ ++ H G +K+V + S T PE RT PP LGEHT VL
Sbjct: 325 DLGEVFQDPQVLARRMQIDLPHPTAGSVKLVASPIKMSATPPEARTHPPLLGEHTSSVLA 384
Query: 121 DLLNYDETTIAKLKEKKIL 139
D+L YDE IA+L+E K +
Sbjct: 385 DVLGYDEAKIARLRESKAV 403
>gi|187479664|ref|YP_787689.1| CoA-transferase [Bordetella avium 197N]
gi|115424251|emb|CAJ50804.1| putative CoA-transferase [Bordetella avium 197N]
Length = 408
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 131/283 (46%), Positives = 191/283 (67%), Gaps = 9/283 (3%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTEL 270
PL+ +R+LDLTR++AGP+CT LADLGAEVIK+E+P +GD+ R WGPP+L NT
Sbjct: 7 PLTGIRVLDLTRVLAGPWCTQNLADLGAEVIKIERPGSGDDTRAWGPPYLKNAAGENTSE 66
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
+ Y+ NRNK SV +D TP G +++++LA Q D++VENF G L + L Y+ L IN
Sbjct: 67 AAYYLSANRNKFSVTLDIATPRGAELVRELAMQSDIVVENFKVGGLRKYGLDYESLKAIN 126
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLAT 386
+LIYCS+TGFG GPY RPGYD + +GGL+ ITG P G P K G+A DL T
Sbjct: 127 PRLIYCSITGFGQTGPYASRPGYDFMIQGMGGLMSITGERDDLPGGGPQKAGVAVTDLMT 186
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANV 446
G+Y+ ++AA++ + ++G GQ ID LL QV+ML N N++ +G+ +R G +H N+
Sbjct: 187 GMYSTVGILAAIIERERSGLGQHIDMALLDCQVAMLANQNLNFMTSGVAPRRAGNAHQNL 246
Query: 447 VPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
VP+QVF ++G++ + G+D Q+++ C+V+ + LA D R+ T
Sbjct: 247 VPYQVFAAADGHLIVAVGNDSQFRNYCRVIGMPELADDARFAT 289
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C+V+ + LA D R+ T RV NR+ L + + + + WL + P +N+
Sbjct: 273 CRVIGMPELADDARFATNPQRVRNRDALVPMLAERMLTGARDTWLTELEAAGVPAGPINT 332
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
+ QV+ D + + +E+ H G I + S T P P LGEHT +L +
Sbjct: 333 LDQVYQDPQVLARGMKRELPHPVAGVAPIAASPLKLSETPVAYLRPAPMLGEHTHQILSE 392
Query: 122 LLNYDETTIAKLKE 135
L +T I L +
Sbjct: 393 RLGLSDTEIEALAQ 406
>gi|352104862|ref|ZP_08960582.1| hypothetical protein HAL1_14881 [Halomonas sp. HAL1]
gi|350598647|gb|EHA14758.1| hypothetical protein HAL1_14881 [Halomonas sp. HAL1]
Length = 409
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 133/281 (47%), Positives = 188/281 (66%), Gaps = 4/281 (1%)
Query: 213 PSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELST 272
P+ PL+ +++LD++R++AGP+C +LAD+GA+VIKVE+P +GD+ R WGPP+L TE S
Sbjct: 9 PTKPLAGIKVLDISRVLAGPWCGQMLADMGADVIKVERPGSGDDTRHWGPPWLAGTEESA 68
Query: 273 YFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQ 332
Y+ C NR K+SV VD PEGQ +IK L Q DVL+ENF G L R L Y L +N +
Sbjct: 69 YYLCANRGKRSVTVDMAKPEGQAVIKQLVAQSDVLIENFKVGGLKRYGLDYASLKALNPK 128
Query: 333 LIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATGL 388
LIYCS+TGFG + PY R GYD + ++GG++ +TG PD G P K G+A D+ TGL
Sbjct: 129 LIYCSITGFGQESPYAHRAGYDFMIQAMGGIMSLTGKPDDEPGGGPVKSGVAFTDIFTGL 188
Query: 389 YAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVP 448
YA A++AAL + +G G ID L+ QV +L N NYL +G +R G +H N+VP
Sbjct: 189 YAANAILAALYQRRDSGVGCHIDMALMDVQVGVLANQALNYLTSGNVPQRLGNAHPNIVP 248
Query: 449 HQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+Q F T +G++ + G+D+Q++ C V++L LA DPR+ T
Sbjct: 249 YQAFATQDGHMIMAVGNDEQFKRFCTVLSLPTLAEDPRFAT 289
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 80/139 (57%), Gaps = 1/139 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C V++L LA DPR+ T RV +R LL ++EA ++TT+EWL F+ V P +N
Sbjct: 272 FCTVLSLPTLAEDPRFATNGARVNHRALLVPQLEAALAQRTTDEWLAAFEAVGVPCGPIN 331
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ +VF D H++ L + + H++ G + +V + ++ Q T PP LG+HT+ VL+
Sbjct: 332 TLDRVFDDPHVKARGLKQTLPHDQAGHVDLVANPIRFNGAQLSATTAPPHLGQHTESVLE 391
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L E A L+E I+
Sbjct: 392 ELGITPEQRTA-LREAGII 409
>gi|398804753|ref|ZP_10563744.1| putative acyl-CoA transferase/carnitine dehydratase [Polaromonas
sp. CF318]
gi|398093362|gb|EJL83748.1| putative acyl-CoA transferase/carnitine dehydratase [Polaromonas
sp. CF318]
Length = 410
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 141/286 (49%), Positives = 187/286 (65%), Gaps = 13/286 (4%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE----LST 272
LS +RILDL+R++AGP+CT LADLGA+VIK+E+P TGD+ R WGPPFL + + +
Sbjct: 4 LSGIRILDLSRVLAGPWCTQTLADLGADVIKIERPGTGDDTRTWGPPFLKDAQGADTEAA 63
Query: 273 YFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQ 332
Y+ NRNK+SV D P GQ ++++LA CDV VENF G + R L Y L IN +
Sbjct: 64 YYLGTNRNKRSVTCDIAQPAGQALVRELAAHCDVFVENFKVGDMARYGLDYASLKAINPR 123
Query: 333 LIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD---GPPCKVGIASIDLATGLY 389
L+YCSVTGFG GPY +R GYD +GGL+ +TG D G P KVG+A DL TG+Y
Sbjct: 124 LVYCSVTGFGQNGPYAERAGYDYAIQGMGGLMSVTGERDDLGGGPQKVGVAVADLMTGMY 183
Query: 390 AHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPH 449
A A++AAL H KTG+GQ++D LL TQV+ML N+GANYL +G R G +H N+VP+
Sbjct: 184 ATVAILAALRHAEKTGEGQQVDMALLDTQVAMLANLGANYLVSGKAPGRAGNAHQNIVPY 243
Query: 450 QVFKT------SNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
QVF+ S ++ + G+D QY C V N+ LA +P + T
Sbjct: 244 QVFEVAPAADGSKDHLILAVGNDSQYAKFCAVANIPELATNPLFAT 289
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 74/139 (53%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C V N+ LA +P + T RV+NR L +EA ++ +WL + P +N
Sbjct: 272 FCAVANIPELATNPLFATNRNRVQNRGQLVPILEAVMKTRSKADWLAALEAAKVPCGAIN 331
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++++VFAD I +V E H D+K+V + S T PPP LG+HT+ VL+
Sbjct: 332 NLAEVFADPQIAARGMVTEWRHPVKDDLKLVSSPMHLSATPVRTDLPPPLLGQHTEQVLR 391
Query: 121 DLLNYDETTIAKLKEKKIL 139
+LLNY + +++LK K +
Sbjct: 392 ELLNYSDAKLSELKGGKTI 410
>gi|167919302|ref|ZP_02506393.1| CAIB/BAIF family protein [Burkholderia pseudomallei BCC215]
Length = 366
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 136/282 (48%), Positives = 189/282 (67%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
LS++R+LDL+R++AGP+C LADLGA+VIKVE+P GD+ R WGPP+L +T +
Sbjct: 4 LSHIRVLDLSRVLAGPWCAQTLADLGADVIKVERPECGDDTRHWGPPYLKTPDGADTREA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV VD TPEGQ+II++LA QCDV++EN+ G+L + L Y L+ +
Sbjct: 64 AYYLAANRNKRSVTVDIATPEGQRIIRELAAQCDVVLENYKVGQLAKYGLDYASLAAVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCSVTGFG GPY R GYD I +GG + ITG P G P K G+A DLATG
Sbjct: 124 GLVYCSVTGFGQTGPYAHRAGYDFIIQGMGGFMSITGERDGLPGGGPQKAGVAIADLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ +TG+GQ ID LL QV++L N+ N+L +G RWG +H N+V
Sbjct: 184 LYSTIAILAALAHRDRTGEGQHIDMALLDVQVALLANMNTNFLASGKPPVRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+TS+G++ + G+D Q++ + LA D R+ T
Sbjct: 244 PYQTFETSDGWIIVAVGNDGQFRKFVEAGGRPELADDERFAT 285
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%)
Query: 10 LALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADE 69
LA D R+ T RV +R+ L + A T +T EWL + + P +N +++VF DE
Sbjct: 277 LADDERFATNPARVRHRDTLVPIVAAMTKTRTKREWLDALEALGVPCGPINDLAEVFDDE 336
Query: 70 HIQDIKLVKEISHEKYGDIKIV 91
++ + ++ H K+V
Sbjct: 337 QVRARGMQVDLPHPSGASAKLV 358
>gi|407927200|gb|EKG20100.1| CoA-transferase family III [Macrophomina phaseolina MS6]
Length = 447
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 136/286 (47%), Positives = 192/286 (67%), Gaps = 8/286 (2%)
Query: 215 LPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-------NN 267
LPL+ +R+LD+TR++AGP+CT +L DLGAEVIK+E P+ GD+ R WGPP+
Sbjct: 43 LPLAGIRVLDMTRVLAGPYCTQILGDLGAEVIKIEHPIRGDDTRAWGPPYAKYISDEAQG 102
Query: 268 TELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLS 327
S YF VNRNKKS+ + F P G I+ LAK CDVLVEN++PG L + + Y+ +S
Sbjct: 103 PGESAYFLSVNRNKKSLGLSFAHPAGVAILHKLAKDCDVLVENYLPGGLKKYGMDYESVS 162
Query: 328 EINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATG 387
+IN LIY S+TG+G GPY DR GYD++ + GL+HITG DGPP KVG+A DL TG
Sbjct: 163 KINPSLIYASITGYGQTGPYSDRAGYDVMVEAEMGLMHITGSRDGPPVKVGVAVTDLTTG 222
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAG-IEGKRWGTSHANV 446
LY ++MAAL+ + +TGKGQ ID L QV+ L N+ ++ L +G + RWGT+H ++
Sbjct: 223 LYTSNSIMAALIGRGRTGKGQHIDVALSDCQVATLTNIASSALISGKKDSGRWGTAHPSI 282
Query: 447 VPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
VP++ FKT++G + +G G+D+ Y + + + A D R++T AL
Sbjct: 283 VPYKAFKTADGDILLGGGNDRLYGILVERIGKAEWAKDGRFVTNAL 328
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 83/129 (64%)
Query: 11 ALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEH 70
A D R++T ALRV+NR+LL + IE +T +KTT+EWL I +G PYA +N I EH
Sbjct: 318 AKDGRFVTNALRVKNRDLLEELIENETKKKTTQEWLEILEGCGMPYAAINDIQGTLNHEH 377
Query: 71 IQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETTI 130
+ +V E+ H G IK+V V YS ++P +RTPPP LG+HTD VLK+++ E I
Sbjct: 378 VLARNMVAEVEHPTCGPIKLVNTPVKYSFSEPSIRTPPPTLGQHTDEVLKNMVGMSEAEI 437
Query: 131 AKLKEKKIL 139
A L+ + ++
Sbjct: 438 ANLRSEGVV 446
>gi|167568079|ref|ZP_02360995.1| CAIB/BAIF family protein [Burkholderia oklahomensis EO147]
Length = 406
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 135/282 (47%), Positives = 188/282 (66%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
LS++R+LDL+R++AGP+C LADLGA+VIKVE+P GD+ R WGPP+L +T +
Sbjct: 4 LSHIRVLDLSRVLAGPWCAQTLADLGADVIKVERPDVGDDTRHWGPPYLKTPDGADTREA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +D TPEGQ+II++LA QCDV++EN+ G+L + L Y L +
Sbjct: 64 AYYLAANRNKRSVTIDIATPEGQRIIRELAAQCDVVLENYKVGQLAKYGLDYASLKAVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCSVTGFG GPY R GYD I +GG + ITG P G P K G+A DLATG
Sbjct: 124 DLVYCSVTGFGQTGPYAHRAGYDFIIQGMGGFMSITGERDGLPGGGPQKAGVAIADLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ +TG+GQ ID LL QV++L N+ N+L +G RWG +H N+V
Sbjct: 184 LYSTIAILAALAHRDRTGEGQHIDMALLDVQVALLANMNTNFLASGKPPVRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+TS+G++ + G+D Q++ + LA D R+ T
Sbjct: 244 PYQTFETSDGWIIVAVGNDGQFRKFVEAGGRAALADDERFAT 285
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 75/130 (57%)
Query: 10 LALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADE 69
LA D R+ T RV +R+ L + T +T EWL + V P +N +++VF DE
Sbjct: 277 LADDERFATNPARVRHRDTLVPIVAEMTRTRTKREWLDALEAVGVPCGPINDLAEVFDDE 336
Query: 70 HIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETT 129
++ + E+ H ++K+V + S T P+ RT PP LGEHTD VL+D+L Y +T
Sbjct: 337 QVRARGMQVELPHPSGANVKLVRNPIRMSETPPDARTAPPLLGEHTDAVLRDMLGYGDTA 396
Query: 130 IAKLKEKKIL 139
IA L++K+++
Sbjct: 397 IAALRDKRVV 406
>gi|221202095|ref|ZP_03575131.1| formyl-CoA transferase [Burkholderia multivorans CGD2M]
gi|221204774|ref|ZP_03577791.1| formyl-CoA transferase [Burkholderia multivorans CGD2]
gi|221214970|ref|ZP_03587938.1| formyl-CoA transferase [Burkholderia multivorans CGD1]
gi|421473161|ref|ZP_15921304.1| CoA-transferase family III protein [Burkholderia multivorans ATCC
BAA-247]
gi|221165197|gb|EED97675.1| formyl-CoA transferase [Burkholderia multivorans CGD1]
gi|221175631|gb|EEE08061.1| formyl-CoA transferase [Burkholderia multivorans CGD2]
gi|221178178|gb|EEE10589.1| formyl-CoA transferase [Burkholderia multivorans CGD2M]
gi|400221623|gb|EJO52060.1| CoA-transferase family III protein [Burkholderia multivorans ATCC
BAA-247]
Length = 406
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 136/282 (48%), Positives = 185/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
LS++R+LDLTR++AGP+C LAD GA+VIK+E+P GD+ R WGPP+L + T +
Sbjct: 4 LSHIRVLDLTRVLAGPWCAQTLADFGADVIKIERPGAGDDTRHWGPPYLKDAHGADTAEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV VD TPEGQQI+++LA Q DV++EN+ G+L + L Y L +
Sbjct: 64 AYYLAANRNKRSVTVDIATPEGQQIVRELAAQSDVVLENYKVGQLKKYGLDYASLRAVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCSVTGFG GPY R GYD I IGG + ITG P G P K G+A DLATG
Sbjct: 124 DLVYCSVTGFGQTGPYAHRAGYDFIVQGIGGFMSITGERDGVPGGGPQKAGVAIADLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ AV+AAL H+ +TG GQ ID LL QV++L N+ N+L +G RWG +H N+V
Sbjct: 184 LYSTIAVLAALAHRDRTGVGQYIDMALLDVQVALLANMNTNFLASGTPPVRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+TS+G++ + G+D Q++ + LA D R+ T
Sbjct: 244 PYQTFQTSDGWIIVAVGNDGQFRKFVEAGGRPELADDERFAT 285
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 68/130 (52%)
Query: 10 LALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADE 69
LA D R+ T RV +R+ L + ++ W+ + P +N +++VFA+E
Sbjct: 277 LADDERFATNPARVRHRDTLVPILAEMVKTRSKTAWIDALEAAGVPCGPINDLAEVFANE 336
Query: 70 HIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETT 129
+ + + H D+K+V V S T P+ RT PP LG HTD VL+D+L YD+
Sbjct: 337 QVVARGMEVALPHPCGADVKLVRNPVRMSATPPDARTAPPLLGAHTDDVLRDMLGYDDAR 396
Query: 130 IAKLKEKKIL 139
IA LK K+ +
Sbjct: 397 IAALKAKQAI 406
>gi|445495352|ref|ZP_21462396.1| formyl-CoA transferase [Janthinobacterium sp. HH01]
gi|444791513|gb|ELX13060.1| formyl-CoA transferase [Janthinobacterium sp. HH01]
Length = 409
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 194/294 (65%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L ++R+LDL+R++AGP+C+ LADLGA+VIK+E+P +GD+ R WGPP+ ++T +
Sbjct: 7 LGHIRVLDLSRVLAGPWCSQNLADLGADVIKIERPGSGDDTRAWGPPYAKDAAGHDTTEA 66
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NR K+SV +D + +GQ +I++LA CDV++ENF G+L R L Y+ L I
Sbjct: 67 AYYLAANRGKRSVTIDIASADGQALIRELASHCDVVLENFKVGQLKRYGLDYESLKAIKP 126
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCSVTGFG GPY R GYD + +GGL+ +TG P G P K G+A DL TG
Sbjct: 127 DLVYCSVTGFGQDGPYAHRAGYDFLIQGMGGLMSVTGERDDLPGGGPQKAGVALTDLMTG 186
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA A++AAL H+ ++G+GQ ID LL QV+ML N+G+NYLN+G KRWG +H N+V
Sbjct: 187 MYATIAILAALTHRDRSGEGQYIDMALLDVQVAMLANMGSNYLNSGKPPKRWGNAHPNIV 246
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F+ ++GY+ + TG+D QYQ +V LA RY T L + L+
Sbjct: 247 PYQTFQCADGYIIVATGNDGQYQKFVEVGGRGDLAQHERYATNPLRVKHRDELV 300
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 66/130 (50%)
Query: 10 LALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADE 69
LA RY T LRV++R+ L + + + + W+ + V P +N++ V+ +
Sbjct: 280 LAQHERYATNPLRVKHRDELVPLLAEMVLAQPRDFWIDQLEAVGVPCGPINNLDDVYKNP 339
Query: 70 HIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETT 129
+ +LV + H G K+V + SLT + PP LG+HTD +L+D+L +
Sbjct: 340 QVLARELVMNVPHPTAGTTKLVRSPMKMSLTPTDNAVAPPLLGQHTDEILRDMLGQSDED 399
Query: 130 IAKLKEKKIL 139
IA L+ + +L
Sbjct: 400 IAALRAQGVL 409
>gi|167570232|ref|ZP_02363106.1| CAIB/BAIF family protein [Burkholderia oklahomensis C6786]
Length = 406
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 134/282 (47%), Positives = 188/282 (66%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
LS++R+LDL+R++AGP+C LADLGA+VIKVE+P GD+ R WGPP+L +T +
Sbjct: 4 LSHIRVLDLSRVLAGPWCAQTLADLGADVIKVERPDVGDDTRHWGPPYLKTPDGADTREA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +D TPEGQ+I+++LA QCDV++EN+ G+L + L Y L +
Sbjct: 64 AYYLAANRNKRSVTIDIATPEGQRIVRELAAQCDVVLENYKVGQLAKYGLDYASLKAVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCSVTGFG GPY R GYD I +GG + ITG P G P K G+A DLATG
Sbjct: 124 DLVYCSVTGFGQTGPYAHRAGYDFIIQGMGGFMSITGERDGLPGGGPQKAGVAIADLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ +TG+GQ ID LL QV++L N+ N+L +G RWG +H N+V
Sbjct: 184 LYSTIAILAALAHRDRTGEGQHIDMALLDVQVALLANMNTNFLASGKPPVRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+TS+G++ + G+D Q++ + LA D R+ T
Sbjct: 244 PYQTFETSDGWIIVAVGNDGQFRKFVEAGGRAALADDERFAT 285
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 75/130 (57%)
Query: 10 LALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADE 69
LA D R+ T RV +R+ L + T +T EWL + V P +N +++VF DE
Sbjct: 277 LADDERFATNPARVRHRDTLVPIVAEMTRTRTKREWLDALEAVGVPCGPINDLAEVFDDE 336
Query: 70 HIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETT 129
++ + E+ H ++K+V + S T P+ RT PP LGEHTD VL+D+L Y +T
Sbjct: 337 QVRARGMQVELPHPSGANVKLVRNPIRMSETPPDARTAPPLLGEHTDAVLRDMLGYGDTA 396
Query: 130 IAKLKEKKIL 139
IA L++K+++
Sbjct: 397 IAALRDKRVV 406
>gi|431928900|ref|YP_007241934.1| acyl-CoA transferase/carnitine dehydratase [Pseudomonas stutzeri
RCH2]
gi|431827187|gb|AGA88304.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
stutzeri RCH2]
Length = 407
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 141/294 (47%), Positives = 191/294 (64%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+C +L DLGAEVIKVE+P TGD+ R WGPP+L NT +
Sbjct: 5 LSHIRVLDLSRVLAGPWCGQILGDLGAEVIKVERPGTGDDTRHWGPPYLKDQHGENTSEA 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+S+ VDF PEGQ+II++L QCDVL+ENF G L L Y+ L +N
Sbjct: 65 AYYLTANRNKQSLTVDFTRPEGQRIIRELVAQCDVLLENFKVGGLAAYGLDYESLKALNP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG D P KVG+A D+ TG
Sbjct: 125 RLIYCSITGFGQDGPYATRAGYDFMIQGLGGLMSLTGRSDAEEGAGPVKVGVALTDILTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA V+AAL H+ ++G+GQ ID LL QV+ L N NYL G+ KR G +H N+V
Sbjct: 185 LYATVGVLAALAHRERSGEGQHIDTALLDVQVACLGNQALNYLATGVAPKRMGNAHPNIV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + + G+D Q++ C+V A DPR+ T +A + LI
Sbjct: 245 PYQDFPTADGDIILTVGNDGQFRKFCEVAGRPEWATDPRFATNRARVAHRAELI 298
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 69/139 (49%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V A DPR+ T RV +R L I T+ +TT EW+ + P +N
Sbjct: 269 FCEVAGRPEWATDPRFATNRARVAHRAELIPLIRQVTVFRTTAEWVSALEQAGVPCGPIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD +Q L E+ H G + V + S + R PPP LGEH++ +L+
Sbjct: 329 DLAQVFADPQVQHRGLNVEMPHPLAGRVPQVASPLRLSASPVAYRNPPPLLGEHSEALLQ 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
LL ++ IA L+ ++
Sbjct: 389 RLLGMNDEQIAGLRAAGVI 407
>gi|313235934|emb|CBY25077.1| unnamed protein product [Oikopleura dioica]
Length = 398
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 134/281 (47%), Positives = 198/281 (70%), Gaps = 6/281 (2%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL+ RI+DLTR++AGPFCT LL D GA+VIKVEQP +GD+ R WGPPF + + YF
Sbjct: 6 PLAGKRIIDLTRVLAGPFCTQLLGDWGADVIKVEQPGSGDDTRHWGPPF-DKEGTAIYFH 64
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
+NRNK+S+ VDF+ +G ++I+ L + DV VENF+PGKL LGY+ L IN +++Y
Sbjct: 65 SINRNKRSLAVDFRQKKGLEVIEKLVAESDVFVENFIPGKLAEYGLGYEDLKSINPKIVY 124
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
S++GFG + R GYD+I AS+GGL+ ITG DGPP +VG+A DL TG A++
Sbjct: 125 ASLSGFGQQ---STRAGYDVIVASVGGLMSITGAADGPPARVGVAVTDLFTGSLMSNAIL 181
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
AAL H K + + +LL +Q +ML ++GAN+L AG +GKR+GT+H ++VP+Q FKT+
Sbjct: 182 AALTHVEKNDEAVWVQSSLLQSQAAMLSHIGANFLTAGQDGKRYGTAHPSLVPYQSFKTA 241
Query: 456 NG-YVTIGTGSDKQYQDMCKVMNLQHLALDPRY-LTGALIL 494
+G Y+T+G G+++ ++++C V++ LA D R+ TG+ ++
Sbjct: 242 DGQYLTVGAGNNRHFEEICDVLSCPELASDSRFSSTGSRVI 282
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 6/141 (4%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQG--VSFPYAQ 58
+C V++ LA D R+ + RV NRE L + + + +KT EW +F+ V FP+
Sbjct: 259 ICDVLSCPELASDSRFSSTGSRVINREPLIEFLSHRFSKKTRSEWEALFEQKMVKFPWGG 318
Query: 59 VNSISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
VNSI++ F + ++ L E I + G V + Q +P P LGEH+ V
Sbjct: 319 VNSIAEAFTLPEVANLTL--SFDRENGEKITVPGTPVNFD-KQLNPPSPVPRLGEHSSSV 375
Query: 119 LKDLLNYDETTIAKLKEKKIL 139
L L Y +T I++ + I+
Sbjct: 376 LS-ALGYSQTEISEFVKNSII 395
>gi|311103331|ref|YP_003976184.1| CoA-transferase [Achromobacter xylosoxidans A8]
gi|310758020|gb|ADP13469.1| CoA-transferase family III family protein 1 [Achromobacter
xylosoxidans A8]
Length = 410
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 141/294 (47%), Positives = 189/294 (64%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL-----S 271
LS++R+LDL+R++AGP+ + LLADLGAEVIK+E+P GD+ R WGPP++++ + S
Sbjct: 4 LSHLRVLDLSRVLAGPWASQLLADLGAEVIKIERPGQGDDTRGWGPPWISDPQWGDVAQS 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NRNKKSV VD TP+GQ+++ LA QCDVL+ENF G L L Y L +
Sbjct: 64 AYFAGANRNKKSVAVDIATPDGQRLVAALAAQCDVLIENFKVGGLQAYGLDYDTLKRSHP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
L+YCS+TGFG GPY +RPGYD + +GGL+ ITG DG P KVG+A D+ TG
Sbjct: 124 GLVYCSITGFGQDGPYANRPGYDFLIQGMGGLMSITGRGDGQPGAGPLKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA + AAL H+ +TG+GQ +D LL QV+ L N N+L +G E R G +H N+V
Sbjct: 184 LYATAGIQAALAHRDRTGEGQHVDVALLDVQVAALANQAMNFLASGCEPARLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T +G+V + G+D Q++ C + LA DPRY T LA LI
Sbjct: 244 PYQDFATRDGHVIVTVGNDAQFRRFCGAIGRPDLADDPRYATNTARLASRDTLI 297
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C + LA DPRY T R+ +R+ L +I+ + E+ + WL + + P +N
Sbjct: 268 FCGAIGRPDLADDPRYATNTARLASRDTLIPQIQTQMAEQPSAHWLSTLETLGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+++VFAD + + + + G ++VG + S T E R+ PP LG HT+ VL+
Sbjct: 328 GLAEVFADPQVLQRGMRVPMPDAQSGCAELVGNPLHLSGTPVEYRSAPPVLGAHTEPVLR 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
D+L +A+L+ +
Sbjct: 388 DMLGLAPEALAELRRNGAI 406
>gi|78060243|ref|YP_366818.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
sp. 383]
gi|77964793|gb|ABB06174.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
sp. 383]
Length = 434
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 134/283 (47%), Positives = 188/283 (66%), Gaps = 9/283 (3%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TEL 270
PL+ + +LDL+RI+AGP+CT LADLGA+V K+E+P TGD+ R WGPPFL++ T
Sbjct: 22 PLAGINVLDLSRILAGPWCTQNLADLGADVTKIERPGTGDDTRTWGPPFLHDGEGRATSE 81
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
S Y+ C NR K+SV +D +PEG +I+ LA+Q DVLVENF G L + L Y L+ +N
Sbjct: 82 SAYYLCTNRGKRSVAIDIASPEGAALIRSLAEQADVLVENFKVGGLAKYGLDYPGLAAVN 141
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLAT 386
+L+YCS+TGFG GP R GYD + +GGL+ TG PD G P KVG+A DL +
Sbjct: 142 PRLVYCSITGFGQTGPLAHRAGYDFLIQGMGGLMSFTGEPDEAPGGGPEKVGVAVTDLMS 201
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANV 446
G+YA A++AAL+ + ++G GQ ID +LL +Q +ML N +NYL G+ +R G +H NV
Sbjct: 202 GMYATTAILAALMERERSGLGQHIDISLLDSQFAMLANQASNYLTTGVAPRRLGNAHPNV 261
Query: 447 VPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
VP+Q F +G++ I G+D Q++ +C + L LA D R+ T
Sbjct: 262 VPYQTFAARDGHLIIACGNDGQFKALCGAIGLPGLAEDSRFAT 304
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 67/141 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L LA D R+ T + R NR LL + + + +EW+ IF+ P +N
Sbjct: 287 LCGAIGLPGLAEDSRFATNSARSVNRALLLPTLVDAFLARPRDEWIAIFESCGVPCGPIN 346
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++Q A E + + V+ I+H G +V + S T E PP LGEH+ VL+
Sbjct: 347 DVAQALASEQARAREAVRHIAHPLAGSAPVVASPLRLSATPVEYDRAPPLLGEHSADVLR 406
Query: 121 DLLNYDETTIAKLKEKKILGL 141
+ L + I L E ++ L
Sbjct: 407 ERLELSDARITALAEAGVIAL 427
>gi|209519488|ref|ZP_03268283.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
sp. H160]
gi|209500089|gb|EEA00150.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
sp. H160]
Length = 406
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 135/282 (47%), Positives = 188/282 (66%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDLTR++AGP+C LAD GAEVIK+E+P GD+ R WGPP+L +T +
Sbjct: 4 LSHIRVLDLTRVLAGPWCAQTLADFGAEVIKIERPEVGDDTRHWGPPYLKTPDGTDTREA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +D +PEGQ+I+++LA Q DV++EN+ G+L + L Y+ L ++
Sbjct: 64 AYYLAANRNKRSVTLDIASPEGQRIVRELAAQSDVVLENYKVGQLKKYGLDYESLKQVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHIT----GHPDGPPCKVGIASIDLATG 387
LIYCSVTGFG GPY R GYD I IGG + IT G P G P K G+A DL TG
Sbjct: 124 DLIYCSVTGFGQTGPYAPRAGYDFIVQGIGGFMSITGERDGQPGGGPQKAGVAIADLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+Y+ AV+ AL H+ +TG+GQ ID LL QV+ML N+ +NYL +G RWG +H N+V
Sbjct: 184 MYSTIAVLTALTHRDRTGEGQYIDMALLDVQVAMLANMNSNYLASGQPPVRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+TS+G++ + G+D Q++ +V LA D R+ T
Sbjct: 244 PYQTFQTSDGWIIVAVGNDGQFRKFVEVGARPELADDDRFAT 285
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 68/131 (51%)
Query: 9 HLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFAD 68
LA D R+ T RV NRELL + + ++W+ + P +N++ +VF +
Sbjct: 276 ELADDDRFATNPARVRNRELLVPILAEMVRLQGKQQWIAGLEAAGVPCGPINNLDEVFDN 335
Query: 69 EHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDET 128
E + L ++ H +K+V + S T P+ PP LGEHT+ VL+D+L YD
Sbjct: 336 EQVVARGLQVDLPHPSGATVKLVRNPINMSGTPPQALRHPPLLGEHTEAVLRDVLGYDAQ 395
Query: 129 TIAKLKEKKIL 139
TIA LK K ++
Sbjct: 396 TIAGLKGKSVI 406
>gi|115351338|ref|YP_773177.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
ambifaria AMMD]
gi|115281326|gb|ABI86843.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
ambifaria AMMD]
Length = 426
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 135/282 (47%), Positives = 186/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELST---- 272
LS++R+LDLTR++AGP+C LAD GA+VIK+E+P GD+ R WGPP+L + +
Sbjct: 24 LSHIRVLDLTRVLAGPWCAQTLADFGADVIKIERPGAGDDTRHWGPPYLKDAAGADTAEA 83
Query: 273 -YFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV VD TPEGQQI+++LA Q DV++EN+ G+L + L Y+ L +
Sbjct: 84 AYYLAANRNKRSVTVDIATPEGQQIVRELAAQSDVVLENYKVGQLAKYGLDYESLRAVKP 143
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITG----HPDGPPCKVGIASIDLATG 387
L+YCSVTGFG GPY R GYD I IGG + ITG P G P K G+A DLATG
Sbjct: 144 DLVYCSVTGFGQTGPYAHRAGYDFIVQGIGGFMSITGERDSEPGGGPQKAGVAIADLATG 203
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ AV+AAL H+ +TG+GQ ID LL QV++L N+ N+L +G RWG +H N+V
Sbjct: 204 LYSTIAVLAALAHRDRTGEGQYIDMALLDVQVALLANMNTNFLASGKPPVRWGNAHPNIV 263
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+TS+G++ + G+D Q++ + LA D R+ T
Sbjct: 264 PYQTFQTSDGWIIVAVGNDGQFRKFVEAGGRAELADDERFAT 305
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 64/131 (48%)
Query: 9 HLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFAD 68
LA D R+ T RV +R+ L + + +W+ + P +N + +VF +
Sbjct: 296 ELADDERFATNPSRVRHRDTLVPILAEMVKTRAKADWIGTLEAAGVPCGPINELDEVFDN 355
Query: 69 EHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDET 128
E + + + H D+K+V + S T P+ RT PP LG T+ VL+D+L YD
Sbjct: 356 EQVVARGMQVSLPHPCGADVKLVRNPIRMSATPPDARTAPPLLGAQTEAVLRDMLGYDAA 415
Query: 129 TIAKLKEKKIL 139
IA LK K+ +
Sbjct: 416 RIAALKAKQAI 426
>gi|255318742|ref|ZP_05359969.1| L-carnitine dehydrogenase [Acinetobacter radioresistens SK82]
gi|262378079|ref|ZP_06071236.1| formyl-CoA transferase [Acinetobacter radioresistens SH164]
gi|255304240|gb|EET83430.1| L-carnitine dehydrogenase [Acinetobacter radioresistens SK82]
gi|262299364|gb|EEY87276.1| formyl-CoA transferase [Acinetobacter radioresistens SH164]
Length = 406
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 137/280 (48%), Positives = 187/280 (66%), Gaps = 9/280 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ R+LDL+RI+AGP+C+ +LADLGAEVIK+E+P +GD+ R+WGPP+L +T+ S
Sbjct: 5 LTGFRVLDLSRILAGPWCSQILADLGAEVIKIEKPYSGDDTRRWGPPWLKDDSGQDTQES 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NR K SV +D T EGQQ+I+ L + DVL+EN+ G L + L Y+ L+ IN
Sbjct: 65 AYYLSANRGKHSVAIDLATLEGQQLIRTLVLESDVLIENYKAGSLQKYGLDYETLAAINP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TGFG KGP D PGYD I +GG++ +TG P G P K G+A DL TG
Sbjct: 125 RLVYCSITGFGQKGPRADEPGYDFIIQGMGGMMSVTGERDDLPGGGPQKAGLAFADLTTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL + KTG+GQ ID LL TQV+ L + NYL +G R+G +HAN+V
Sbjct: 185 LYSAIAIQAALLSREKTGEGQHIDMALLDTQVASLSVLAMNYLTSGKVPSRFGNAHANIV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
P+QVFK G I G+D Q++ +C+ + L LAL P Y
Sbjct: 245 PYQVFKAEKGEFIIACGNDSQFKALCESIGLAELALHPHY 284
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 69/139 (49%), Gaps = 2/139 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + L LAL P Y + RV RE L ++ M + EEW+ I V P +N
Sbjct: 269 LCESIGLAELALHPHYRQNSGRVTYREELTALLQQHFMTRPAEEWVKIIHQVKVPVGMIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q +E + ++V + H + +G + S T E + PP L + T+ +L
Sbjct: 329 NLKQTLEEEQVIAREMVVNMPHSLQQNYTSIGSPIKLSKTPVEYQKAPPYLAQDTENILS 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
L+ ET I +LKEKKI+
Sbjct: 389 RYLS--ETEIIELKEKKII 405
>gi|299132383|ref|ZP_07025578.1| L-carnitine dehydratase/bile acid-inducible protein F [Afipia sp.
1NLS2]
gi|298592520|gb|EFI52720.1| L-carnitine dehydratase/bile acid-inducible protein F [Afipia sp.
1NLS2]
Length = 405
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 136/291 (46%), Positives = 191/291 (65%), Gaps = 5/291 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TEL 270
PL +R+LDL+RI+AGP CT +L DLGA+VIK+E+P GD+ R WGPPFL + T
Sbjct: 4 PLEGIRVLDLSRILAGPSCTQILGDLGADVIKIERPGVGDDTRSWGPPFLTDENGEPTRE 63
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
S YF +NRNK+SV VD T +G+ I+ DL ++ DVLVENF G LD+ G++ +
Sbjct: 64 SAYFLSINRNKRSVTVDITTDDGKAILYDLIEKSDVLVENFKVGDLDKRGFGWEEVHAKA 123
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYA 390
L+YCS+TG+G GPY +PGYD I +GGL+ ITG PDG P KV + D+ +G+YA
Sbjct: 124 PSLVYCSITGYGQDGPYAPQPGYDFIIQGMGGLMSITGEPDGEPMKVAVPIADIMSGMYA 183
Query: 391 HGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQ 450
+++AAL + K G G++ID +LL QV+ L N +N+L G+E KR+G +H N+VP+Q
Sbjct: 184 TVSILAALREREKEGIGRRIDISLLDCQVAWLYNQVSNFLVDGLEPKRFGNAHPNIVPYQ 243
Query: 451 VFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
F T++G+V +G G+D Q+ C ++ L LDPR+ T L L LI
Sbjct: 244 TFATADGHVNLGVGNDPQFFRFCSLIERPDLRLDPRFATNTLRLKHRKELI 294
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 77/141 (54%), Gaps = 2/141 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C ++ L LDPR+ T LR+++R+ L EI A ++T+ WL + + P ++
Sbjct: 265 FCSLIERPDLRLDPRFATNTLRLKHRKELITEISAAFAKRTSAHWLSLCRQEQVPCGPIH 324
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGD--IKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
+I +VF D ++ ++ E+ H G I+++ + S + +R+ PP LGEHT+ V
Sbjct: 325 TIPEVFEDPQVKARGVLAEVKHSATGKNPIRLLRSPIRMSGVELGIRSAPPMLGEHTNEV 384
Query: 119 LKDLLNYDETTIAKLKEKKIL 139
L + L Y + IA L +K ++
Sbjct: 385 LGNDLGYSDAKIAALHDKGVV 405
>gi|423015308|ref|ZP_17006029.1| CoA-transferase family III family protein 3 [Achromobacter
xylosoxidans AXX-A]
gi|338781711|gb|EGP46094.1| CoA-transferase family III family protein 3 [Achromobacter
xylosoxidans AXX-A]
Length = 409
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 136/289 (47%), Positives = 191/289 (66%), Gaps = 10/289 (3%)
Query: 210 SENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL---- 265
S+ P+ PL+ +R+LDLTR++AGP+CT LADLGAEVIK+E+P GD+ R WGPP+L
Sbjct: 2 SQRPA-PLTGIRVLDLTRVLAGPWCTQNLADLGAEVIKIERPGAGDDTRAWGPPYLKDAA 60
Query: 266 -NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYK 324
N+T + Y+ NRNK SV +D +P G +++++LA Q D+LVENF G L + L Y
Sbjct: 61 GNDTTEAAYYLSANRNKFSVALDIASPRGAELVRELALQSDILVENFKVGGLAKYGLDYA 120
Query: 325 HLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIA 380
L E+N +LIYCS+TGFG GPY RPGYD + +GGL+ ITG P G P K G+A
Sbjct: 121 SLKEVNPRLIYCSITGFGQTGPYASRPGYDFMIQGMGGLMSITGERDDLPGGGPQKAGVA 180
Query: 381 SIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWG 440
DL TG+Y+ ++AAL + +G GQ ID LL QV+ML N NY+ +G +R G
Sbjct: 181 VADLMTGMYSTVGILAALHERSVSGLGQHIDMALLDCQVAMLANQNLNYMTSGNAPRRAG 240
Query: 441 TSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+H N+VP+QVF S+G++ + G+D Q+++ C + L L+ DPR+ T
Sbjct: 241 NAHQNLVPYQVFAASDGHLIVAVGNDSQFRNYCGAIGLPELSADPRFST 289
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 62/135 (45%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C + L L+ DPR+ T RV+NRE L + + + WL + V P +N+
Sbjct: 273 CGAIGLPELSADPRFSTNPQRVKNREALVPLLAERMATGARDHWLAALEAVGVPAGPINT 332
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
+ QV+ D + + +E+ H G + + + +S + E R PP LGEHT VL +
Sbjct: 333 LEQVYEDPQVLARGMKRELPHPTAGIVPMAASPLKFSGSPVEYRRAPPMLGEHTAQVLAE 392
Query: 122 LLNYDETTIAKLKEK 136
L I L +
Sbjct: 393 KLGLTAAEIQALAQS 407
>gi|326402182|ref|YP_004282263.1| putative CoA-transferase [Acidiphilium multivorum AIU301]
gi|325049043|dbj|BAJ79381.1| putative CoA-transferase [Acidiphilium multivorum AIU301]
Length = 409
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 137/284 (48%), Positives = 181/284 (63%)
Query: 212 NPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELS 271
+PS PL+ + + DLTR++AGP C +LADLGAEVIK+E+P +GD+ R + PP L TE S
Sbjct: 11 SPSGPLAGLTVFDLTRVLAGPTCVQMLADLGAEVIKIEKPGSGDDTRGFAPPALPGTEQS 70
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NRNK+SV +D PEGQ++ + L + D+LVENF G L R LGY L N
Sbjct: 71 AYFAGANRNKRSVTLDIAKPEGQKLARALIAKSDILVENFKVGTLPRYGLGYNDLRADNP 130
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
LIYCS+TGFG GPY RPGYD + ++GG++ +TG PDG P KVG+ DL GLY
Sbjct: 131 GLIYCSITGFGQTGPYASRPGYDSLIQAMGGIMSLTGVPDGQPMKVGVPVADLFAGLYGA 190
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
V+AAL H+ TG+GQ ID +L T V+ L N G NYL +G R G H N+VP+QV
Sbjct: 191 IGVLAALRHREITGQGQHIDIGMLDTHVAWLANQGMNYLASGKNPPRLGNEHPNIVPYQV 250
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILA 495
F T +G++ + G+D + C L+HL D R+ T A +A
Sbjct: 251 FATEDGHIVLSIGNDPTFARFCNAFGLEHLLADERFATNAARVA 294
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 66/139 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C L+HL D R+ T A RV NR + + A + WL + + +N
Sbjct: 271 FCNAFGLEHLLADERFATNAARVANRAFVTDTLAAVLARHPSAWWLERLEELKIGCGPIN 330
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ QVFAD H+ + E++ +K+V V S T + R PP LGEHTD VL
Sbjct: 331 TLEQVFADPHVIARGNLIEMTRSDGVPVKLVANPVRLSETPVDYRLAPPMLGEHTDEVLT 390
Query: 121 DLLNYDETTIAKLKEKKIL 139
++L DE A L+ I+
Sbjct: 391 NMLGLDEPARAALRRDGII 409
>gi|186476372|ref|YP_001857842.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
phymatum STM815]
gi|184192831|gb|ACC70796.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
phymatum STM815]
Length = 406
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 134/282 (47%), Positives = 186/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
LS++R+LDLTR++AGP+C LAD GA+VIKVE+P GD+ R WGPP+L +T +
Sbjct: 4 LSHIRVLDLTRVLAGPWCAQTLADFGADVIKVERPGAGDDTRHWGPPYLKTPDGADTREA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV VD TPEGQQI+++LA Q DV++EN+ G+L + L Y L +
Sbjct: 64 AYYLAANRNKRSVTVDIATPEGQQIVRELAAQSDVVLENYKVGQLKKYGLDYDSLKAVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
++YCSVTGFG GPY R GYD I +GG + ITG P G P K G+A DL TG
Sbjct: 124 DIVYCSVTGFGQTGPYAQRAGYDFIIQGMGGFMSITGERDDLPGGGPQKAGVAIADLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+Y+ AV+ AL H+ +TG+GQ ID LL QV+ML N+ +N+L +G RWG +HAN+V
Sbjct: 184 MYSSVAVLTALAHRDRTGEGQYIDMALLDVQVAMLANMNSNFLASGKPPVRWGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+TS+ ++ + G+D Q++ + N LA D R+ T
Sbjct: 244 PYQTFQTSDSWIIVAVGNDGQFRKFVEAGNRADLADDDRFAT 285
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 68/134 (50%)
Query: 6 NLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQV 65
N LA D R+ T RV NRE+L + ++ EW+ + P +N + +V
Sbjct: 273 NRADLADDDRFATNPARVRNREMLVPILAEMVRTRSKHEWIDALEAAGVPCGPINDLEEV 332
Query: 66 FADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNY 125
F +E + + ++ H G +K+V + S T PE + PP LGEHT+ VL+D+L Y
Sbjct: 333 FENEQVVARGMQVQLPHPSGGTVKLVRNPIRMSATPPEAQAHPPTLGEHTEAVLRDVLGY 392
Query: 126 DETTIAKLKEKKIL 139
+ I L+ + ++
Sbjct: 393 GDEQIDALRGRSVI 406
>gi|392422875|ref|YP_006459479.1| putative lipid metabolism-related protein [Pseudomonas stutzeri
CCUG 29243]
gi|390985063|gb|AFM35056.1| putative lipid metabolism-related protein [Pseudomonas stutzeri
CCUG 29243]
Length = 407
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 141/294 (47%), Positives = 190/294 (64%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+C +L DLGAEVIKVE+P TGD+ R WGPP+L NT +
Sbjct: 5 LSHIRVLDLSRVLAGPWCGQILGDLGAEVIKVERPGTGDDTRHWGPPYLKDQHGENTSEA 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+S+ VDF PEGQ+II++L QCDVL+ENF G L L Y L IN
Sbjct: 65 AYYLTANRNKQSLTVDFTRPEGQRIIRELVAQCDVLLENFKVGGLAAYGLDYASLKAINP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+L+YCS+TGFG GPY R GYD + +GGL+ +TG D P KVG+A D+ TG
Sbjct: 125 RLVYCSITGFGQDGPYATRAGYDFMIQGLGGLMSLTGRSDAEEGAGPVKVGVALTDILTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA V+AAL H+ ++G+GQ ID LL QV+ L N NYL G+ KR G +H N+V
Sbjct: 185 LYATVGVLAALAHRERSGEGQHIDTALLDVQVACLGNQALNYLTTGVAPKRMGNAHPNIV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + + G+D Q++ C+V A DPR+ T +A + LI
Sbjct: 245 PYQDFPTADGDIILTVGNDGQFRKFCEVAGRSEWADDPRFATNRARVAHRADLI 298
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 71/139 (51%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V A DPR+ T RV +R L I T+ +TT EW+ + P +N
Sbjct: 269 FCEVAGRSEWADDPRFATNRARVAHRADLIPLIRQVTVFRTTAEWVGALEQAGVPCGPIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD +Q L E+ H G + V + S + + R PPP LGEH++ +L+
Sbjct: 329 DLAQVFADPQVQHRGLRVEMPHPLAGSVPQVASPLRLSASPVDYRMPPPLLGEHSEALLQ 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
LL ++ IA L++ ++
Sbjct: 389 RLLGMNDEQIAGLRQAGVI 407
>gi|171321469|ref|ZP_02910414.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
ambifaria MEX-5]
gi|171093252|gb|EDT38455.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
ambifaria MEX-5]
Length = 413
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 136/282 (48%), Positives = 186/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELST---- 272
LS++R+LDLTR++AGP+C LAD GA+VIKVE+P GD+ R WGPP+L + +
Sbjct: 11 LSHIRVLDLTRVLAGPWCAQTLADFGADVIKVERPGAGDDTRHWGPPYLKDAAGADTAEA 70
Query: 273 -YFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV VD TPEGQQI+++LA Q DV++EN+ G+L + L Y+ L +
Sbjct: 71 AYYLAANRNKRSVTVDIATPEGQQIVRELAAQSDVVLENYKVGQLAKYGLDYESLRAVKP 130
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITG----HPDGPPCKVGIASIDLATG 387
L+YCSVTGFG GPY R GYD I IGG + ITG P G P K G+A DLATG
Sbjct: 131 DLVYCSVTGFGQTGPYAHRAGYDFIVQGIGGFMSITGERDSEPGGGPQKAGVAIADLATG 190
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ AV+AAL H+ +TG+GQ ID LL QV++L N+ N+L +G RWG +H N+V
Sbjct: 191 LYSTIAVLAALAHRDRTGEGQYIDMALLDVQVALLANMNTNFLASGKPPVRWGNAHPNIV 250
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+TS+G++ + G+D Q++ + LA D R+ T
Sbjct: 251 PYQTFQTSDGWIIVAVGNDGQFRKFVEAGGRAELADDERFAT 292
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 64/131 (48%)
Query: 9 HLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFAD 68
LA D R+ T RV +R+ L + + +W+ + P +N + +VF +
Sbjct: 283 ELADDERFATNPSRVRHRDTLVPILAQMVKTRGKADWIGTLEAAGVPCGPINELDEVFDN 342
Query: 69 EHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDET 128
E + + + H D+K+V + S T P+ RT PP LG T+ VL+D+L YD
Sbjct: 343 EQVVARGMQVSLPHPCGADVKLVRNPIRMSATPPDARTAPPLLGAQTEAVLRDMLGYDAA 402
Query: 129 TIAKLKEKKIL 139
IA LK K+ +
Sbjct: 403 RIAALKAKQAI 413
>gi|358059112|dbj|GAA95051.1| hypothetical protein E5Q_01706 [Mixia osmundae IAM 14324]
Length = 1173
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 137/308 (44%), Positives = 193/308 (62%), Gaps = 34/308 (11%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL----- 270
PL +RI+DLTR++AGP+ TMLLADLGA+VIK+E P GD+ R W PPF +T
Sbjct: 664 PLKGLRIVDLTRVLAGPYSTMLLADLGADVIKIEHPTRGDDTRAWYPPFAPSTGAKAHPA 723
Query: 271 -----------------------------STYFTCVNRNKKSVCVDFKTPEGQQIIKDLA 301
S YF VNR K+S+ ++ KT EGQ I+K+L
Sbjct: 724 PPALAQDGSEKVSTTKDDSQADWSNLPPESAYFLSVNRGKRSLGLNLKTQEGQAIVKELI 783
Query: 302 KQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIG 361
K+ DVLVEN+VPGKL + LGY+ IN +IY S+TG+G GP++ PGYD++ +
Sbjct: 784 KKADVLVENYVPGKLAEMGLGYEDCHSINPGIIYASITGYGQTGPFRTAPGYDVMIEAEA 843
Query: 362 GLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSM 421
GL+HITG PD P KVG+A DL TGLY HGA+MAALL + +TGKG ID +L +Q++
Sbjct: 844 GLMHITGEPDRAPVKVGVAITDLTTGLYVHGAIMAALLGRARTGKGAWIDASLFDSQIAS 903
Query: 422 LINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHL 481
L N+G+NYL AG E R GT+H ++VP++ F T + ++ IG G+D Q++ + +++
Sbjct: 904 LANIGSNYLIAGQEATRQGTAHPSIVPYETFATKDSFIMIGAGNDGQFRILSRLLGQPGW 963
Query: 482 ALDPRYLT 489
+ + R+ T
Sbjct: 964 SDEARFKT 971
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 61/123 (49%)
Query: 15 RYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEHIQDI 74
R+ T RV NR +L I +TT W+ F G P+A +N+I F +
Sbjct: 968 RFKTNGDRVANRAILKDLITRALSAQTTTSWVEAFTGKGIPFAPINNIKGTFEHAQAKAR 1027
Query: 75 KLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETTIAKLK 134
+V E+ H + G IK + PA+ Y+ + V PPP L +HT VL + L YD I +L+
Sbjct: 1028 GVVVEVEHARAGRIKQLAPAMYYNGQRMPVNRPPPVLAQHTAEVLAEELGYDVEKIRQLR 1087
Query: 135 EKK 137
K
Sbjct: 1088 ASK 1090
>gi|209885198|ref|YP_002289055.1| caib/baif family protein [Oligotropha carboxidovorans OM5]
gi|337741178|ref|YP_004632906.1| CoA-transferase, CaiB/BaiF family protein [Oligotropha
carboxidovorans OM5]
gi|386030194|ref|YP_005950969.1| CaiB/BaiF family CoA-transferase [Oligotropha carboxidovorans OM4]
gi|209873394|gb|ACI93190.1| caib/baif family protein [Oligotropha carboxidovorans OM5]
gi|336095262|gb|AEI03088.1| CoA-transferase, CaiB/BaiF family protein [Oligotropha
carboxidovorans OM4]
gi|336098842|gb|AEI06665.1| CoA-transferase, CaiB/BaiF family protein [Oligotropha
carboxidovorans OM5]
Length = 405
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 136/291 (46%), Positives = 192/291 (65%), Gaps = 5/291 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TEL 270
PL VR+LDL+RI+AGP CT +L DLGA+VIK+E+P GD+ R WGPPFL + T
Sbjct: 4 PLEGVRVLDLSRILAGPSCTQILGDLGADVIKIERPGAGDDTRSWGPPFLTDENGEPTRE 63
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
S YF +NRNK+SV VD T +G+ I+ DL ++ DVLVENF G LD+ G++ +
Sbjct: 64 SAYFLSINRNKRSVTVDITTDDGKAILYDLIEKSDVLVENFKVGDLDKRGFGWEQVHARA 123
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYA 390
L+YCS+TG+G GPY +PGYD I +GGL+ ITG PDG P KV + D+ +G+YA
Sbjct: 124 PSLVYCSITGYGQTGPYAPQPGYDFIIQGMGGLMSITGEPDGEPMKVAVPIADIMSGMYA 183
Query: 391 HGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQ 450
+++AAL + K G G++ID +LL QV+ L N +N+L G+E KR+G +H N+VP+Q
Sbjct: 184 TVSILAALREREKEGIGRRIDISLLDCQVAWLYNQVSNFLVDGLEPKRFGNAHPNIVPYQ 243
Query: 451 VFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
F T++G+V +G G+D Q+ +C ++ L LDPR+ + L L LI
Sbjct: 244 TFATADGHVNLGVGNDAQFFRLCSLIERPDLRLDPRFASNTLRLKHRKELI 294
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 77/141 (54%), Gaps = 2/141 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ L LDPR+ + LR+++R+ L EI A ++T+ WL + + P ++
Sbjct: 265 LCSLIERPDLRLDPRFASNTLRLKHRKELITEIGAAFTQRTSAYWLHMCRQEQVPCGPIH 324
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGD--IKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
SI +VF D ++ ++ E+ H G+ ++++ + S VR PP LGEHT+ V
Sbjct: 325 SIPEVFEDPQVKARGVLAEVKHSATGEKPVRLLRSPIRMSGVDLGVRRAPPMLGEHTNEV 384
Query: 119 LKDLLNYDETTIAKLKEKKIL 139
L + L Y E IA L +K ++
Sbjct: 385 LGNDLGYSEAKIAALHDKGVV 405
>gi|170701932|ref|ZP_02892857.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
ambifaria IOP40-10]
gi|170133165|gb|EDT01568.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
ambifaria IOP40-10]
Length = 406
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 136/282 (48%), Positives = 186/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELST---- 272
LS++R+LDLTR++AGP+C LAD GA+VIKVE+P GD+ R WGPP+L + +
Sbjct: 4 LSHIRVLDLTRVLAGPWCAQTLADFGADVIKVERPGAGDDTRHWGPPYLKDAAGADTAEA 63
Query: 273 -YFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV VD TPEGQQI+++LA Q DV++EN+ G+L + L Y+ L +
Sbjct: 64 AYYLAANRNKRSVTVDIATPEGQQIVRELAAQSDVVLENYKVGQLAKYGLDYESLRAVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITG----HPDGPPCKVGIASIDLATG 387
L+YCSVTGFG GPY R GYD I IGG + ITG P G P K G+A DLATG
Sbjct: 124 DLVYCSVTGFGQTGPYAHRAGYDFIVQGIGGFMSITGERDSEPGGGPQKAGVAIADLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ AV+AAL H+ +TG+GQ ID LL QV++L N+ N+L +G RWG +H N+V
Sbjct: 184 LYSTIAVLAALAHRDRTGEGQYIDMALLDVQVALLANMNTNFLASGKPPVRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+TS+G++ + G+D Q++ + LA D R+ T
Sbjct: 244 PYQTFQTSDGWIIVAVGNDGQFRKFVEAGGRAELADDERFAT 285
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 64/131 (48%)
Query: 9 HLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFAD 68
LA D R+ T RV +R+ L + + +W+ + P +N + +VF +
Sbjct: 276 ELADDERFATNPSRVRHRDTLVPILAEMVKTRAKADWIGTLEAAGVPCGPINELDEVFDN 335
Query: 69 EHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDET 128
E + + + H D+K+V + S T PE RT PP LG T+ VL+D+L YD
Sbjct: 336 EQVVARGMQVSLPHPCGADVKLVRNPIRMSATPPEARTAPPLLGAQTEAVLRDMLGYDAA 395
Query: 129 TIAKLKEKKIL 139
IA LK K+ +
Sbjct: 396 RIAALKAKQAI 406
>gi|187924801|ref|YP_001896443.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
phytofirmans PsJN]
gi|187715995|gb|ACD17219.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
phytofirmans PsJN]
Length = 406
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 134/282 (47%), Positives = 186/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDLTR++AGP+C LAD GA+VIK+E+P GD+ R WGPP+L +T +
Sbjct: 4 LSHIRVLDLTRVLAGPWCAQTLADFGADVIKIERPEVGDDTRHWGPPYLKTPEGEDTREA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV VD +PEGQ+II++LA Q DV++EN+ G+L + L Y L E+
Sbjct: 64 AYYLAANRNKRSVTVDIASPEGQRIIRELAAQSDVVLENYKVGQLKKYGLDYASLKEVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHIT----GHPDGPPCKVGIASIDLATG 387
++YCSVTGFG GPY R GYD I IGG + IT G P G P K G+A DL TG
Sbjct: 124 DIVYCSVTGFGQTGPYAQRAGYDFIVQGIGGFMSITGERDGQPGGGPQKAGVAIADLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+Y+ AV+ AL H+ +TG+GQ ID LL QV+ML N+ +NYL +G RWG +H N+V
Sbjct: 184 MYSTIAVLTALTHRDRTGEGQYIDMALLDVQVAMLANMNSNYLASGQPPVRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+TS+G++ + G+D Q++ + LA D R+ T
Sbjct: 244 PYQTFQTSDGWIIVAVGNDGQFRKFIEAGGRPELADDERFAT 285
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 69/131 (52%)
Query: 9 HLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFAD 68
LA D R+ T RV NR++L + + ++W+ + P +N + +VF +
Sbjct: 276 ELADDERFATNPARVRNRDVLVPILAEMVRLQGKQQWIAALEAAGVPCGPINDLGEVFEN 335
Query: 69 EHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDET 128
E + L ++ H G +K+V + + T PE PP LGEHT+ +L+D+L YDE
Sbjct: 336 EQVVARGLQVDLPHPSGGTVKLVRNPINMTGTPPEALAHPPTLGEHTESILRDVLGYDEA 395
Query: 129 TIAKLKEKKIL 139
TIA L+ + ++
Sbjct: 396 TIAALRSQSVI 406
>gi|390575998|ref|ZP_10256078.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
terrae BS001]
gi|420253990|ref|ZP_14757016.1| putative acyl-CoA transferase/carnitine dehydratase [Burkholderia
sp. BT03]
gi|389932139|gb|EIM94187.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
terrae BS001]
gi|398050333|gb|EJL42705.1| putative acyl-CoA transferase/carnitine dehydratase [Burkholderia
sp. BT03]
Length = 406
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 133/282 (47%), Positives = 186/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
LS++R+LDLTR++AGP+C LAD GA+VIKVE+P GD+ R WGPP+L +T +
Sbjct: 4 LSHIRVLDLTRVLAGPWCAQTLADFGADVIKVERPGAGDDTRHWGPPYLKTPEGADTREA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV VD TPEGQQI+++LA Q DV++EN+ G+L + L Y+ L + +
Sbjct: 64 AYYLAANRNKRSVTVDIATPEGQQIVRELAAQSDVVLENYKVGQLKKYGLDYESLKAVKA 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHIT----GHPDGPPCKVGIASIDLATG 387
++YCSVTGFG GPY R GYD I IGG + IT G P G P K G+A DL TG
Sbjct: 124 DIVYCSVTGFGQTGPYAQRAGYDFIVQGIGGFMSITGERDGQPGGGPQKAGVAIADLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+Y+ AV+ AL H+ +TG+GQ ID LL QV+ML N+ +N+L +G RWG +H N+V
Sbjct: 184 MYSSVAVLTALAHRDRTGEGQYIDMALLDVQVAMLANMNSNFLASGKPPARWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+TS+ ++ + G+D Q++ + LA D R+ T
Sbjct: 244 PYQTFQTSDSWIIVAVGNDGQFRKFVEAGKRADLADDDRFAT 285
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 68/130 (52%)
Query: 10 LALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADE 69
LA D R+ T RV NRE L + ++ EW+ + P +N + +VF +E
Sbjct: 277 LADDDRFATNPERVRNRETLVPILAEMVRTRSKHEWIDALEAAGVPCGPINDLEEVFENE 336
Query: 70 HIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETT 129
+ + ++ H G +K+V + S+T PE + PP LGEHT+ VL+D+L YD+
Sbjct: 337 QVVARGMEIQLPHPSGGTVKLVRNPIRMSVTPPEAQAHPPTLGEHTEAVLRDVLGYDDVR 396
Query: 130 IAKLKEKKIL 139
I L+ + ++
Sbjct: 397 IDALRGRSVI 406
>gi|377821277|ref|YP_004977648.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
sp. YI23]
gi|357936112|gb|AET89671.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
sp. YI23]
Length = 406
Score = 290 bits (743), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 134/282 (47%), Positives = 184/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDLTR++AGP C LAD GA+VIK+E+P TGD+ R WGPP+L +T +
Sbjct: 4 LSHIRVLDLTRVLAGPMCAQTLADFGADVIKIERPETGDDTRHWGPPYLKTPDGEDTREA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV VD TPEGQQI+++LA Q DV++EN+ G+L + L Y+ L +
Sbjct: 64 AYYLAANRNKRSVTVDIATPEGQQIVRELAAQSDVVLENYKAGQLKKYGLDYESLKAVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHIT----GHPDGPPCKVGIASIDLATG 387
++YCSVTGFG GPY R GYD I IGG + IT G P G P K G+A DL TG
Sbjct: 124 DIVYCSVTGFGQTGPYAPRAGYDFIVQGIGGFMSITGERDGQPGGGPQKAGVAIADLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA V+ AL H+ +TG+GQ ID LL QV+ML N+ N+L +G RWG +H N+V
Sbjct: 184 MYATIGVLTALAHRDRTGEGQYIDMALLDVQVAMLANMNTNFLASGKPPVRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+TS+G++ + G+D Q++ + LA D R+ T
Sbjct: 244 PYQTFQTSDGWIIVAVGNDGQFRKFVETGGRAELADDARFST 285
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 66/131 (50%)
Query: 9 HLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFAD 68
LA D R+ T RV NR+LL + K W+ + P +N + +VF D
Sbjct: 276 ELADDARFSTNPSRVRNRDLLVPILADMVRLKGKHAWISELEAAGVPCGPINDLGEVFDD 335
Query: 69 EHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDET 128
+ K+ ++ H G +K+V + S T PE R+ PP LGEHT VL +L YDE
Sbjct: 336 PQVLARKMQIDLPHPTGGAVKLVANPIKMSATPPEARSHPPMLGEHTSDVLSGVLGYDEA 395
Query: 129 TIAKLKEKKIL 139
IA+L+E K +
Sbjct: 396 KIARLREAKAI 406
>gi|83721042|ref|YP_443177.1| CAIB/BAIF family protein [Burkholderia thailandensis E264]
gi|167620353|ref|ZP_02388984.1| CAIB/BAIF family protein [Burkholderia thailandensis Bt4]
gi|257139410|ref|ZP_05587672.1| CAIB/BAIF family protein [Burkholderia thailandensis E264]
gi|83654867|gb|ABC38930.1| CAIB/BAIF family protein [Burkholderia thailandensis E264]
Length = 406
Score = 290 bits (743), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 135/282 (47%), Positives = 187/282 (66%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
LS++R+LDL+R++AGP+C LADLGA+VIKVE+P GD+ R WGPP+L +T +
Sbjct: 4 LSHIRVLDLSRVLAGPWCAQTLADLGADVIKVERPELGDDTRHWGPPYLKTPDGADTREA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV VD TPEGQ+I+++LA QCDV++EN+ G+L + L Y L+ +
Sbjct: 64 AYYLAANRNKRSVTVDIATPEGQRIVRELAAQCDVVLENYKVGQLAKYGLDYASLAAVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCSVTGFG GPY R GYD I +GG + ITG P G P K G+A DLATG
Sbjct: 124 DLVYCSVTGFGQTGPYAHRAGYDFIIQGMGGFMSITGERDGLPGGGPQKAGVAIADLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ +TG GQ ID LL QV++L N+ N+L +G RWG +H N+V
Sbjct: 184 LYSTIAILAALAHRDRTGCGQHIDMALLDVQVALLANMNTNFLASGKPPVRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+TS+G++ + G+D Q++ LA D R+ T
Sbjct: 244 PYQTFETSDGWIIVAVGNDGQFRKFVDAGGRAELADDARFAT 285
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 73/130 (56%)
Query: 10 LALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADE 69
LA D R+ T RV +R+ L I T +T EWL + + P +N +++VF DE
Sbjct: 277 LADDARFATNPARVRHRDTLVPIIAEMTKTRTKREWLDALEALGVPCGPINDLAEVFDDE 336
Query: 70 HIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETT 129
++ + E+ H +K+V + S T P+ R+ PP LGEHTD VL+D+L Y +
Sbjct: 337 QVRARGMQVELPHPSGATVKLVRNPIRMSETPPDARSAPPLLGEHTDAVLRDMLGYGDAA 396
Query: 130 IAKLKEKKIL 139
IA L++K+++
Sbjct: 397 IAALRDKRVV 406
>gi|421869093|ref|ZP_16300735.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
cenocepacia H111]
gi|358070914|emb|CCE51613.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
cenocepacia H111]
Length = 428
Score = 290 bits (743), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 135/282 (47%), Positives = 186/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE-----LS 271
LS++R+LDLTR++AGP+C LAD GA+VIKVE+P GD+ R WGPP+L + E +
Sbjct: 26 LSHIRVLDLTRVLAGPWCAQTLADFGADVIKVERPGAGDDTRHWGPPYLKDAEGADTAEA 85
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +D TPEGQ+I+++LA Q DV++EN+ G+L + L Y L +
Sbjct: 86 AYYLAANRNKRSVTIDIATPEGQRIVRELAAQSDVVLENYKVGQLKKYGLDYDALRAVKP 145
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHIT----GHPDGPPCKVGIASIDLATG 387
L+YCSVTGFG GPY R GYD I IGG + IT G P G P K G+A DLATG
Sbjct: 146 DLVYCSVTGFGQTGPYAHRAGYDFIVQGIGGFMSITGERDGEPGGGPQKAGVAIADLATG 205
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ AV+AAL H+ +TG+GQ ID LL QV++L N+ N+L +G RWG +H N+V
Sbjct: 206 LYSTIAVLAALAHRDRTGEGQYIDMALLDVQVALLANMNTNFLASGKPPVRWGNAHPNIV 265
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+TS+G++ + G+D Q++ + LA D R+ T
Sbjct: 266 PYQTFQTSDGWIIVAVGNDGQFRKFVEAGGRPELADDERFAT 307
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 65/131 (49%)
Query: 9 HLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFAD 68
LA D R+ T RV +R+ L + + +W+ + P +N + +VF +
Sbjct: 298 ELADDERFATNPSRVRHRDTLVPILAEMVKARGKADWIGALEAAGVPCGPINDLDEVFDN 357
Query: 69 EHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDET 128
E + + + H D+K+V + S T P+ RT PP LG T+ VL+D+L YD+
Sbjct: 358 EQVVARGMQVALPHPCGADVKLVRNPIRMSATPPDARTAPPLLGAQTEEVLRDMLGYDDE 417
Query: 129 TIAKLKEKKIL 139
IA LK K+ +
Sbjct: 418 RIAALKAKQAI 428
>gi|418293977|ref|ZP_12905878.1| putative lipid metabolism-like protein [Pseudomonas stutzeri ATCC
14405 = CCUG 16156]
gi|379065361|gb|EHY78104.1| putative lipid metabolism-like protein [Pseudomonas stutzeri ATCC
14405 = CCUG 16156]
Length = 407
Score = 290 bits (743), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 141/294 (47%), Positives = 191/294 (64%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
LS++R+LDL+R++AGP+C +L DLGAEVIKVE+P TGD+ R WGPP+L NT +
Sbjct: 5 LSHIRVLDLSRVLAGPWCGQILGDLGAEVIKVERPGTGDDTRHWGPPYLQDQHGENTSEA 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+S+ VDF PEGQ+II++L QCDVL+ENF G L L Y+ L IN
Sbjct: 65 AYYLTANRNKQSLTVDFTRPEGQRIIRELVTQCDVLLENFKVGGLAAYGLDYESLKAINP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG D G P KVG+A D+ TG
Sbjct: 125 RLIYCSITGFGQDGPYATRAGYDFMIQGLGGLMSLTGRSDAEEGGGPVKVGVALTDILTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA V+AAL H+ ++G+GQ ID LL QV+ L N NYL G+ KR G +H N+V
Sbjct: 185 LYATVGVLAALAHRERSGEGQHIDTALLDVQVACLGNQALNYLTTGVAPKRMGNAHPNIV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + + G+D Q++ C+V A D R+ T ++ + LI
Sbjct: 245 PYQDFPTADGDIILTVGNDGQFRKFCEVAGRPEWAADARFATNRARVSHRAELI 298
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 69/139 (49%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V A D R+ T RV +R L I T+ +TT EW+ + P +N
Sbjct: 269 FCEVAGRPEWAADARFATNRARVSHRAELIPLIRQVTVFRTTAEWVSALEQAGVPCGPIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD +Q L E+ H G + V + S + R PPP LGEH++ +L+
Sbjct: 329 DLAQVFADPQVQHRGLNVEMPHPLAGRVPQVASPLRLSASPVAYRNPPPLLGEHSEALLQ 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
LL ++ IA L+ +++
Sbjct: 389 RLLGMNDEQIAGLRAARVI 407
>gi|167582194|ref|ZP_02375068.1| CAIB/BAIF family protein [Burkholderia thailandensis TXDOH]
Length = 406
Score = 290 bits (743), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 135/282 (47%), Positives = 187/282 (66%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
LS++R+LDL+R++AGP+C LADLGA+VIKVE+P GD+ R WGPP+L +T +
Sbjct: 4 LSHIRVLDLSRVLAGPWCAQTLADLGADVIKVERPELGDDTRHWGPPYLKTPDGADTREA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV VD TPEGQ+I+++LA QCDV++EN+ G+L + L Y L+ +
Sbjct: 64 AYYLAANRNKRSVTVDIATPEGQRIVRELAAQCDVVLENYKVGQLAKYGLDYASLAAVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCSVTGFG GPY R GYD I +GG + ITG P G P K G+A DLATG
Sbjct: 124 DLVYCSVTGFGQTGPYAHRAGYDFIIQGMGGFMSITGERDGLPGGGPQKAGVAIADLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ +TG GQ ID LL QV++L N+ N+L +G RWG +H N+V
Sbjct: 184 LYSTIAILAALAHRDRTGCGQHIDMALLDVQVALLANMNTNFLASGKPPVRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+TS+G++ + G+D Q++ LA D R+ T
Sbjct: 244 PYQTFETSDGWIIVAVGNDGQFRKFVDAGGRAELADDARFAT 285
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 72/130 (55%)
Query: 10 LALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADE 69
LA D R+ T RV +R+ L I T +T EWL + + P +N ++ VF DE
Sbjct: 277 LADDARFATNPARVRHRDTLVPIIAEMTKTRTKREWLDALEALGVPCGPINDLADVFDDE 336
Query: 70 HIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETT 129
++ + E+ H +K+V + S T P+ R+ PP LGEHTD VL+D+L Y +
Sbjct: 337 QVRARGMQVELPHPSGATVKLVRNPIRMSETPPDARSAPPLLGEHTDAVLRDMLGYGDAA 396
Query: 130 IAKLKEKKIL 139
IA L++K+++
Sbjct: 397 IAALRDKRVV 406
>gi|452977166|gb|EME76939.1| hypothetical protein MYCFIDRAFT_46826 [Pseudocercospora fijiensis
CIRAD86]
Length = 443
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 136/293 (46%), Positives = 195/293 (66%), Gaps = 9/293 (3%)
Query: 206 LALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL 265
LA + LPL+ VR+LD+TR++AGP+CT +L DLGAEVIK+E P GD+ R WGPP+
Sbjct: 29 LATEVDASKLPLAGVRVLDMTRVLAGPYCTQILGDLGAEVIKIEHPTRGDDTRAWGPPYA 88
Query: 266 NNTELS--------TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLD 317
+ TE S YF VNRNKKS+ + F+ G I+ LAKQCDVLVEN++PG L
Sbjct: 89 SYTEQSGQQGPGEAAYFLAVNRNKKSIGLSFQDKAGVDILHKLAKQCDVLVENYLPGALK 148
Query: 318 RLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKV 377
+ + Y+ +S++N +IY S+TG+G GP+ R GYD++ + GL+HITGH DGPP KV
Sbjct: 149 KYGMDYESVSKVNPNIIYASITGYGQTGPHSKRAGYDVMVEAEMGLMHITGHRDGPPAKV 208
Query: 378 GIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAG-IEG 436
G+A DL TGLY +VMAAL+ + +TGKGQ ID L Q++ L N+ ++ L +G +
Sbjct: 209 GVAVTDLTTGLYTSNSVMAALIARGRTGKGQHIDVALADCQIATLANIASSCLISGKPDS 268
Query: 437 KRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
RWGT+H ++VP++ FKT +G + +G G+D+ + +C+ + A D R+ T
Sbjct: 269 GRWGTAHPSIVPYKGFKTKDGDILLGGGNDRLFGVLCEKLGKPEWAQDARFKT 321
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 78/139 (56%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + A D R+ T RV+ R+ L IE T KTT++WL I +G PYA +N
Sbjct: 304 LCEKLGKPEWAQDARFKTNPDRVKRRDELEDLIENITKTKTTQQWLDILEGSGMPYAPIN 363
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ Q EH Q +V EI H G +K+V P V +S +QP +RTPPP LG+HTD +L
Sbjct: 364 DVKQTLEHEHTQARGMVTEIFHPTCGPMKLVSPPVKFSHSQPRIRTPPPTLGQHTDELLT 423
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L + + LK + ++
Sbjct: 424 GILGMEPNEVEALKNQGVI 442
>gi|296533278|ref|ZP_06895888.1| formyl-CoA transferase [Roseomonas cervicalis ATCC 49957]
gi|296266395|gb|EFH12410.1| formyl-CoA transferase [Roseomonas cervicalis ATCC 49957]
Length = 401
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 136/286 (47%), Positives = 184/286 (64%)
Query: 210 SENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE 269
+ P+ PL +R++DLTR++AGP T +L DLGAEVIK+E+P GD+ R + PP++ NT
Sbjct: 2 TAEPTGPLKGLRVVDLTRVLAGPTATQMLGDLGAEVIKIERPEAGDDTRGFAPPYVPNTR 61
Query: 270 LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEI 329
S YF VNRNKKSV VD PEGQ I+ L + D+LVENF G L + LG++ L E
Sbjct: 62 ESAYFVGVNRNKKSVTVDIAKPEGQAIVHRLLETADILVENFKVGALAKYGLGWEQLKEK 121
Query: 330 NSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLY 389
+LIYCS+TGFG GPY RPGYD + ++GG++ +TG +G P KVGI DL GLY
Sbjct: 122 YPKLIYCSITGFGQTGPYAPRPGYDALIQAMGGVMSLTGEIEGEPQKVGIPVADLFAGLY 181
Query: 390 AHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPH 449
++AAL H+ TG+GQ+ID +L T V+ L N G NYL G R H N+VP+
Sbjct: 182 GTIGILAALRHREATGQGQQIDIGMLDTHVAWLANQGMNYLATGENPPRLSNQHPNIVPY 241
Query: 450 QVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILA 495
QVF T++GY+ + G+D ++ C+ L+HL D RY T A +A
Sbjct: 242 QVFPTADGYMVLSIGNDPTFERFCRSFGLEHLLADERYATNAARVA 287
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 1/139 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+ L+HL D RY T A RV NR L+ + + T K T EW+ + + +N
Sbjct: 264 FCRSFGLEHLLADERYATNAARVANRALVTETMTTVTRTKPTREWIAQLEALKIGCGPIN 323
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ VFAD H+ +V E+ H +K++ V S T P+ R+ P LG+HT+ VL+
Sbjct: 324 TLRDVFADPHVVARNMVVEMPHASGETVKVIANPVKLSATPPDYRSAAPLLGQHTEEVLR 383
Query: 121 DLLNYDETTIAKLKEKKIL 139
L + E IA +K+ I+
Sbjct: 384 G-LGFAEAEIATMKQGGIV 401
>gi|91778211|ref|YP_553419.1| CAIB/BAIF family protein [Burkholderia xenovorans LB400]
gi|91690871|gb|ABE34069.1| CAIB/BAIF family protein [Burkholderia xenovorans LB400]
Length = 401
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 139/298 (46%), Positives = 188/298 (63%), Gaps = 8/298 (2%)
Query: 212 NPSLP---LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNT 268
+P+LP L VR+LDL+RI+AGP CT LL DLGA+VIKVE+P GD+ RKWGPPF
Sbjct: 3 SPALPAGSLDGVRVLDLSRILAGPSCTQLLGDLGADVIKVEKPGAGDDTRKWGPPFARAA 62
Query: 269 E-----LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGY 323
+ S Y+ C NRNK+SV +D TPEGQ I L DVL+ENF G L R L +
Sbjct: 63 DGTPFDESAYYLCANRNKRSVALDIATPEGQASIHALLAHSDVLIENFKVGDLSRYGLDW 122
Query: 324 KHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASID 383
L +L+YCS+TGFG GPY RPGYD +A ++GG++ +TG PDG P KV + D
Sbjct: 123 PQLHARYPRLVYCSITGFGQDGPYAARPGYDFMAQAMGGIMSLTGEPDGAPQKVAVGITD 182
Query: 384 LATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSH 443
L TG+YA ++AAL H+ + G GQ +D LL QV+ L N +YL +G R G +H
Sbjct: 183 LMTGMYATVGILAALRHRDRHGVGQHVDVALLDCQVASLANAATHYLTSGTPPARLGNAH 242
Query: 444 ANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
N+VP++ F S+GY I G+D Q++ +C + +Q LA D R++T A ++ + LI
Sbjct: 243 PNIVPYEAFPASDGYFVIAVGNDAQFRRLCTLPGMQPLADDARFITNASRVSHRAALI 300
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 62/127 (48%), Gaps = 2/127 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + +Q LA D R++T A RV +R L + A T E+ WL + + P A +N
Sbjct: 271 LCTLPGMQPLADDARFITNASRVSHRAALIPLMRAITRERDAAWWLASLEALQIPCAPIN 330
Query: 61 SISQVFADEHIQDIKLVKEISHEKY--GDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
++ QVFAD + ++ + +Y G ++G + S T PP LGEHT +
Sbjct: 331 TLPQVFADPQVVHREMAVRMEDARYEAGGPVLLGNPLKLSATPVRYARTPPRLGEHTSEI 390
Query: 119 LKDLLNY 125
L L Y
Sbjct: 391 LDQLATY 397
>gi|380095329|emb|CCC06802.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 447
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 135/290 (46%), Positives = 190/290 (65%), Gaps = 9/290 (3%)
Query: 207 ALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPF-- 264
++ S + +LPL R+LD+TR++AGP+CT +L DLGAEVIKVE PV GD+ R WGPP+
Sbjct: 34 SVRSADGTLPLEGYRVLDMTRVLAGPYCTQILGDLGAEVIKVEHPVRGDDTRAWGPPYAS 93
Query: 265 ------LNNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDR 318
+ S YF VNRNKKS+ + F+ P G +I++ LA +CD+LVEN+VPG L +
Sbjct: 94 YKSGSSMEGPGESAYFLGVNRNKKSLALSFQNPAGVEILQKLAAKCDILVENYVPGSLKK 153
Query: 319 LNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVG 378
L Y+ L +IN LIY S+TG+G GPY R GYD++ + GL+HITG DGPP KVG
Sbjct: 154 YGLDYETLRQINPALIYASITGYGQTGPYSSRAGYDVMVEAEFGLMHITGSRDGPPVKVG 213
Query: 379 IASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAG-IEGK 437
+A DL TGLY ++MAALL + KTG+GQ ID L Q + L N+ ++ L +G +
Sbjct: 214 VAVTDLTTGLYTSNSIMAALLARAKTGRGQWIDACLSDCQTATLANIASSCLVSGKKDSG 273
Query: 438 RWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
RWGT+H ++VP++ F+T +G + G G+D+ + +C + DPRY
Sbjct: 274 RWGTAHPSIVPYKAFETKDGDILFGGGNDRLFGILCDGLGRSEWKDDPRY 323
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 81/139 (58%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + DPRY A RV NR L +EIE T KTT+EWL IF+G PYA +N
Sbjct: 308 LCDGLGRSEWKDDPRYKINAQRVANRVELEEEIENITRTKTTQEWLDIFEGKGLPYAAIN 367
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ EH +V E+ HE+ G IK+V V YS T P +R+PPP LG+HTD VL+
Sbjct: 368 DVLTTLTHEHTLARNMVVEVEHEECGPIKMVNSPVKYSETSPTIRSPPPTLGQHTDEVLR 427
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ + + IA+LKEK ++
Sbjct: 428 EHVGLSDEQIAQLKEKGVV 446
>gi|359393900|ref|ZP_09186953.1| CaiB/baiF CoA-transferase family protein [Halomonas boliviensis
LC1]
gi|357971147|gb|EHJ93592.1| CaiB/baiF CoA-transferase family protein [Halomonas boliviensis
LC1]
Length = 404
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 131/278 (47%), Positives = 187/278 (67%), Gaps = 4/278 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL+ +++LD++R++AGP+C +LAD+GA+VIKVE+P +GD+ R WGPP+L ++ S Y+
Sbjct: 7 PLAGIKVLDISRVLAGPWCGQMLADMGADVIKVERPGSGDDTRHWGPPWLTGSDESAYYL 66
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
C NR K+SV VD PEGQ +IK L Q DVL+ENF G L R L Y L +N +LIY
Sbjct: 67 CANRGKRSVTVDMAKPEGQAVIKQLVAQSDVLIENFKVGGLKRYGLDYASLKALNPRLIY 126
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATGLYAH 391
CS+TGFG + PY R GYD + ++GG++ +TG PDG P K G+A D+ TGLYA
Sbjct: 127 CSITGFGQESPYAHRAGYDFMIQAMGGIMSLTGKPDGEPGGGPVKSGVAFTDIFTGLYAA 186
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
AV+AAL + +G+G ID L+ QV +L N NYL +G +R G +H N+VP+Q
Sbjct: 187 NAVLAALYQRRDSGEGCHIDMALMDVQVGVLANQALNYLTSGNVPQRLGNAHPNIVPYQA 246
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
F T +G++ + G+D+Q++ C V++L LA DPR+ T
Sbjct: 247 FSTQDGHMIVAVGNDEQFKRFCAVLSLPALAEDPRFAT 284
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 80/140 (57%), Gaps = 3/140 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C V++L LA DPR+ T RV NR +L ++EA + +T+ WL F+ V P +N
Sbjct: 267 FCAVLSLPALAEDPRFATNGARVNNRAVLVPQLEAALAQCSTDHWLAAFEAVGVPCGPIN 326
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ +VF D H++ L + + H++ G + +V + ++ Q T PP LG+HT+ VL
Sbjct: 327 TLDRVFDDPHVKARGLKQTLPHDQAGQVDLVANPIRFNGAQMSATTAPPHLGQHTESVLD 386
Query: 121 DL-LNYDETTIAKLKEKKIL 139
+L ++ ++ T L+E I+
Sbjct: 387 ELGISLEQRT--ALREAGII 404
>gi|91788347|ref|YP_549299.1| L-carnitine dehydratase/bile acid-inducible protein F [Polaromonas
sp. JS666]
gi|91697572|gb|ABE44401.1| L-carnitine dehydratase/bile acid-inducible protein F [Polaromonas
sp. JS666]
Length = 407
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 139/295 (47%), Positives = 191/295 (64%), Gaps = 9/295 (3%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTEL 270
PLS +++LDL+RI+AGP+ T LL+DLGA+VIKVE+PV GD+ R WGPPFL + T
Sbjct: 4 PLSGIKVLDLSRILAGPWSTQLLSDLGADVIKVERPVGGDDTRGWGPPFLEREDGSATAE 63
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
S YF NR K+S+ VD TPEGQ I++++ K DV VEN+ G + R L Y L EIN
Sbjct: 64 SAYFLSANRGKRSITVDISTPEGQGILREMVKTVDVFVENYKLGDMRRYGLDYAALCEIN 123
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPC----KVGIASIDLAT 386
L+YCS+TGFG GPY R GYD + ++GGL+ ITG D P K G+ DL T
Sbjct: 124 PGLVYCSITGFGQTGPYSSRAGYDFVIQAMGGLMSITGQSDDQPGGGAQKCGVPISDLMT 183
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANV 446
G+YA A+++AL + ++GKGQ ID +LL TQV+ L N +NYL +G KRWG +H N+
Sbjct: 184 GMYASVAIVSALFERTRSGKGQYIDMSLLDTQVAWLANQASNYLVSGKPPKRWGNAHPNL 243
Query: 447 VPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F S+G + + G+D+Q+ +C+ + ++ L D RY T A L + LI
Sbjct: 244 APYQSFAASDGELIVAVGNDRQFGALCRTLGVEGLTNDERYATNAQRLQHRATLI 298
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 60/139 (43%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + ++ L D RY T A R+++R L + WL + P +
Sbjct: 269 LCRTLGVEGLTNDERYATNAQRLQHRATLIPALSELFAHACKRHWLDQLERAGVPCGPIQ 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI + DEH+ +V + H + + +S T R PPALGEHT+ +L
Sbjct: 329 SIPEALTDEHVLARGMVFSLPHSSGAMAPQIANPIKFSRTSIRYRRAPPALGEHTEEILA 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
L + I+ K+K +
Sbjct: 389 TELGWSAEQISASKQKGAI 407
>gi|170732736|ref|YP_001764683.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
cenocepacia MC0-3]
gi|169815978|gb|ACA90561.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
cenocepacia MC0-3]
Length = 406
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 135/282 (47%), Positives = 186/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
LS++R+LDLTR++AGP+C LAD GA+VIKVE+P GD+ R WGPP+L + T +
Sbjct: 4 LSHIRVLDLTRVLAGPWCAQTLADFGADVIKVERPGAGDDTRHWGPPYLKDADGADTAEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +D TPEGQQI+++LA Q DV++EN+ G+L + L Y+ L +
Sbjct: 64 AYYLAANRNKRSVTIDIATPEGQQIVRELAAQSDVVLENYKVGQLKKYGLDYEALRAVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHIT----GHPDGPPCKVGIASIDLATG 387
L+YCSVTGFG GPY R GYD I IGG + IT G P G P K G+A DLATG
Sbjct: 124 DLVYCSVTGFGQTGPYAHRAGYDFIVQGIGGFMSITGERDGEPGGGPQKAGVAIADLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ AV+AAL H+ +TG+GQ ID LL QV++L N+ N+L +G RWG +H N+V
Sbjct: 184 LYSTIAVLAALAHRDRTGEGQYIDMALLDVQVALLANMNTNFLASGKPPVRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+T +G++ + G+D Q++ + LA D R+ T
Sbjct: 244 PYQTFQTRDGWIIVAVGNDGQFRKFVEAGGRPELADDERFAT 285
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 65/131 (49%)
Query: 9 HLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFAD 68
LA D R+ T RV +R+ L + + +W+ + P +N + +VF +
Sbjct: 276 ELADDERFATNPSRVRHRDTLVPILAEMVKARGKADWIGALEAAGVPCGPINDLDEVFDN 335
Query: 69 EHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDET 128
E + + + H D+K+V + S T P+ RT PP LG T+ VL+D+L YD+
Sbjct: 336 EQVVARGMQVSLPHPCGADVKLVRNPIRMSATPPDARTAPPLLGAQTEDVLRDMLGYDDV 395
Query: 129 TIAKLKEKKIL 139
IA LK K+ +
Sbjct: 396 RIAALKAKQAI 406
>gi|148259055|ref|YP_001233182.1| L-carnitine dehydratase/bile acid-inducible protein F [Acidiphilium
cryptum JF-5]
gi|146400736|gb|ABQ29263.1| L-carnitine dehydratase/bile acid-inducible protein F [Acidiphilium
cryptum JF-5]
Length = 409
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 137/284 (48%), Positives = 180/284 (63%)
Query: 212 NPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELS 271
+PS PL+ + + DLTR++AGP C +LADLGAEVIK+E+P +GD+ R + PP L TE S
Sbjct: 11 SPSGPLAGLTVFDLTRVLAGPTCVQMLADLGAEVIKIEKPGSGDDTRGFAPPALPGTEQS 70
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NRNK+SV +D PEGQ++ + L + D+LVENF G L R LGY L N
Sbjct: 71 AYFAGANRNKRSVTLDIAKPEGQKLARALIAKSDILVENFKVGTLPRYGLGYNDLRADNP 130
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
LIYCS+TGFG GPY RPGYD + ++GG++ +TG PDG P KVG+ DL GLY
Sbjct: 131 GLIYCSITGFGQTGPYASRPGYDSLIQAMGGIMSLTGVPDGQPMKVGVPVADLFAGLYGA 190
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
V+AAL H+ TG+GQ ID +L T V+ L N G NYL G R G H N+VP+QV
Sbjct: 191 IGVLAALRHREITGQGQHIDIGMLDTHVAWLANQGMNYLATGKNPPRLGNEHPNIVPYQV 250
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILA 495
F T +G++ + G+D + C L+HL D R+ T A +A
Sbjct: 251 FATEDGHIVLSIGNDPTFARFCNAFGLEHLLADERFATNAARVA 294
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 66/139 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C L+HL D R+ T A RV NR + + A + WL + + +N
Sbjct: 271 FCNAFGLEHLLADERFATNAARVANRAFVTDTLTAVLARHPSAWWLERLEELKIGCGPIN 330
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ QVFAD H+ + E++ +K+V V S T + R PP LGEHTD VL
Sbjct: 331 TLEQVFADPHVIARGNLIEMTRSDGVPVKLVANPVRLSETPVDYRLAPPMLGEHTDEVLT 390
Query: 121 DLLNYDETTIAKLKEKKIL 139
++L DE A L+ I+
Sbjct: 391 NMLGLDEPARAALRRDGII 409
>gi|302688225|ref|XP_003033792.1| hypothetical protein SCHCODRAFT_66602 [Schizophyllum commune H4-8]
gi|300107487|gb|EFI98889.1| hypothetical protein SCHCODRAFT_66602 [Schizophyllum commune H4-8]
Length = 457
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 141/305 (46%), Positives = 195/305 (63%), Gaps = 16/305 (5%)
Query: 193 NKISLYENFYSLDLALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPV 252
+ + YE S A PL ++ILDLTR++AGP TMLL DLGA+VIKVE+
Sbjct: 19 SSVRFYETQPSQAAATPLNGIPPPLEGIKILDLTRVLAGPTATMLLGDLGADVIKVEEIK 78
Query: 253 TGDECR-----KWGPPFL--------NNTEL---STYFTCVNRNKKSVCVDFKTPEGQQI 296
GD+ R W PP + L S YF NRNK+S+ V+ K+P G ++
Sbjct: 79 RGDDTRMFTTCSWHPPAAPLAPNVPKGSEHLPPESAYFLACNRNKRSITVNLKSPGGMEV 138
Query: 297 IKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDII 356
+K L K+ D+LVEN++ GKL + LG+ H +E N LIY S++G+G GP++ GYD++
Sbjct: 139 MKRLVKKSDILVENYISGKLAEMGLGHAHCAEWNPALIYASISGYGQTGPFRKNAGYDVV 198
Query: 357 AASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLS 416
GL+HITG PD PP KVG+A+ D+ATGLY HGA+MAALL + KTGKG IDCNL
Sbjct: 199 IEGEAGLMHITGEPDRPPSKVGVAATDIATGLYTHGAIMAALLSRQKTGKGCWIDCNLFE 258
Query: 417 TQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVM 476
+Q++ L N+ +NYL AG E R GT+H ++VP+QVF+ +G++ IG G+DKQ+ + KV+
Sbjct: 259 SQIAGLANIASNYLVAGQEASRHGTAHPSIVPYQVFRCKDGFIMIGAGNDKQFASLAKVL 318
Query: 477 NLQHL 481
L L
Sbjct: 319 ALPEL 323
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 76/141 (53%), Gaps = 1/141 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+ KV+ L L + + RV+NR L IE K ME+ + WL F+G+ P+ +N
Sbjct: 314 LAKVLALPELPENTMFANNQQRVKNRSELVSIIENKLMEEPRDVWLERFKGIGVPHGPIN 373
Query: 61 SISQVFADEHIQDIKLVKEISHEKY-GDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVL 119
+I + F Q K+ ++ H + G +K+V PAV Y+ + VR PPP LG+HTD VL
Sbjct: 374 NIGETFQHPQAQARKITVDVEHPRIDGPVKLVAPAVHYNGKRMPVRMPPPWLGQHTDEVL 433
Query: 120 KDLLNYDETTIAKLKEKKILG 140
+ L + +A L+ + +G
Sbjct: 434 VNELEFLPEEVADLRRQGDIG 454
>gi|407787922|ref|ZP_11135059.1| L-carnitine dehydratase/bile acid-inducible protein F [Celeribacter
baekdonensis B30]
gi|407198511|gb|EKE68544.1| L-carnitine dehydratase/bile acid-inducible protein F [Celeribacter
baekdonensis B30]
Length = 396
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 133/281 (47%), Positives = 186/281 (66%), Gaps = 4/281 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL----NNTELS 271
PL+ +R+LDLTR++AGP+ T LLADLGAEVIK+E+P TGD+ R WGPPF + S
Sbjct: 6 PLAGLRVLDLTRVLAGPWATQLLADLGAEVIKLERPGTGDDTRSWGPPFAALPDGSRGES 65
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NR KKSV D T G+ + +DLA+Q D+L+ENF G +R+ L Y LS NS
Sbjct: 66 AYFLSANRGKKSVEADLSTSRGRDLARDLARQSDILIENFRVGGTNRMGLDYDTLSAENS 125
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
LIYCS+TGFG GP++ RPGYD++ ++GGL+ +TG +G P K G+A D+ TGLYA
Sbjct: 126 GLIYCSITGFGQTGPHRHRPGYDLLVQAMGGLMSVTGESEGRPMKAGVALADIMTGLYAT 185
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A++AA+ + ++G+G ID +LL Q++ L N NYL +G R G H N+ P+Q
Sbjct: 186 SAILAAVHERARSGRGDYIDLSLLDVQIATLANQAQNYLVSGTAPGRSGNVHPNIAPYQD 245
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
F+T++G + + G+D Q+Q +C + LA DPR+ T AL
Sbjct: 246 FQTADGAMVVAVGNDSQFQRLCDGLGAPDLATDPRFATNAL 286
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 51/116 (43%), Gaps = 8/116 (6%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + LA DPR+ T ALRV N++ L + TT WL I P A +N
Sbjct: 266 LCDGLGAPDLATDPRFATNALRVGNQKALEDALAPVLRNGTTRTWLAILDTHGVPAAAIN 325
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGD--IKIVGPAVAYSLTQPEVRTPPPALGEH 114
I+ VF+D I+ L+ GD + +V + + PP LGEH
Sbjct: 326 DIAAVFSDPQIEARGLLTG------GDDNLPLVACPIRFRRMALSAAIRPPNLGEH 375
>gi|194290352|ref|YP_002006259.1| formyl-CoA transferase, caib/baif family [Cupriavidus taiwanensis
LMG 19424]
gi|193224187|emb|CAQ70196.1| putative Formyl-CoA transferase, CaiB/BaiF family [Cupriavidus
taiwanensis LMG 19424]
Length = 406
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 136/282 (48%), Positives = 185/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDLTR++AGP+C LAD GA+VIKVE+P GD+ R WGPP+L +T +
Sbjct: 4 LSHLRVLDLTRVLAGPWCAQNLADFGADVIKVERPGAGDDTRTWGPPWLKDEDGRDTAEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV D TPEGQQI+++LA Q DV++EN+ G+L + L Y L ++
Sbjct: 64 AYYLAANRNKRSVTCDISTPEGQQIVRELAAQSDVVLENYKVGQLKKYGLDYDSLKQVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
LIYCSVTGFG GPY RPGYD I +GG + +TG P G P K G+A DL TG
Sbjct: 124 DLIYCSVTGFGQTGPYAARPGYDFIIQGMGGFMSLTGERDDLPGGGPQKAGVAISDLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
YA AV+AAL H+ +TG+GQ ID LL QV+ML N+ NYL +G +RWG +H N+V
Sbjct: 184 QYATIAVLAALAHRDRTGEGQYIDMALLDVQVAMLANMNTNYLASGQAPRRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+ ++G++ + G+D Q++ LA DPR+ T
Sbjct: 244 PYQTFQAADGWIIVAVGNDGQFRKFVTDGGKPELADDPRFAT 285
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 67/131 (51%)
Query: 9 HLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFAD 68
LA DPR+ T RV NR++L + +T +W+ + P +N++ VF D
Sbjct: 276 ELADDPRFATNPQRVANRDVLVPILAEMVRPRTRAQWIRDLEAAGVPCGPINTLDDVFED 335
Query: 69 EHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDET 128
+ ++ L ++ H G++K+VG + S T P+ PP LGEHTD VL D L Y
Sbjct: 336 DQVKARGLRVDLPHPSAGEVKLVGSPIKMSATPPQALRHPPLLGEHTDTVLADTLGYSAA 395
Query: 129 TIAKLKEKKIL 139
I L+ K +L
Sbjct: 396 QIDALRAKGVL 406
>gi|113868728|ref|YP_727217.1| acyl-CoA transferase/carnitine dehydratase [Ralstonia eutropha H16]
gi|113527504|emb|CAJ93849.1| predicted acyl-CoA transferase/carnitine dehydratase [Ralstonia
eutropha H16]
Length = 406
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 135/282 (47%), Positives = 186/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDLTR++AGP+C LAD GA+VIK+E+P GD+ R WGPP+L +T +
Sbjct: 4 LSHLRVLDLTRVLAGPWCAQNLADFGADVIKIERPGAGDDTRTWGPPWLKDEDGRDTAEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV D TPEGQQI+++LA Q DV++EN+ G+L + L Y+ L ++
Sbjct: 64 AYYLAANRNKRSVTCDISTPEGQQIVRELAAQSDVVLENYKVGQLRKYGLDYESLRQVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
LIYCSVTGFG GPY RPGYD I +GG + +TG P G P K G+A DL TG
Sbjct: 124 DLIYCSVTGFGQTGPYAARPGYDFIIQGMGGFMSLTGERDDLPGGGPQKAGVAISDLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
YA AV+AAL H+ +TG+GQ ID LL QV+ML N+ NYL +G +RWG +H N+V
Sbjct: 184 QYATIAVLAALAHRDRTGEGQYIDMALLDVQVAMLANMNTNYLASGQAPRRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+ ++G++ + G+D Q++ LA DPR+ T
Sbjct: 244 PYQTFQAADGWIIVAVGNDGQFRKFVTDGGKPELADDPRFAT 285
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 67/131 (51%)
Query: 9 HLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFAD 68
LA DPR+ T RV NR++L + +T +W+ + P +N++ VF D
Sbjct: 276 ELADDPRFATNPQRVANRDVLVPILAEMVRPRTRAQWIRDLEAAGVPCGPINTLDDVFED 335
Query: 69 EHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDET 128
+ ++ L ++ H G++++VG + S T P+ PP LGEHTD VL + L Y
Sbjct: 336 DQVKARGLRVDLPHPSAGEVRLVGSPIKMSATPPQALRHPPLLGEHTDTVLAETLGYGPE 395
Query: 129 TIAKLKEKKIL 139
I L+ K +L
Sbjct: 396 QIEALRAKGVL 406
>gi|295677108|ref|YP_003605632.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
sp. CCGE1002]
gi|295436951|gb|ADG16121.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
sp. CCGE1002]
Length = 406
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 134/282 (47%), Positives = 187/282 (66%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
LS++R+LDLTR++AGP+C LAD GA+VIK+E+P GD+ R WGPP+L +T +
Sbjct: 4 LSHIRVLDLTRVLAGPWCAQTLADFGADVIKIERPEVGDDTRHWGPPYLKTPDGADTREA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +D +PEGQ+I+++LA Q DV++EN+ G+L + L Y+ L +
Sbjct: 64 AYYLAANRNKRSVTLDIASPEGQRIVRELAAQSDVVLENYKVGQLKKYGLDYESLKAVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHIT----GHPDGPPCKVGIASIDLATG 387
LIYCSVTGFG GPY R GYD I IGG + IT G P G P K G+A DL TG
Sbjct: 124 DLIYCSVTGFGQTGPYAQRAGYDFIVQGIGGFMSITGERDGQPGGGPQKAGVAIADLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+Y+ AV+ AL H+ +TG+GQ ID LL QV+ML N+ +NYL +G RWG +H N+V
Sbjct: 184 MYSTIAVLTALTHRDRTGEGQYIDMALLDVQVAMLANMNSNYLASGQPPVRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+TS+G++ + G+D Q++ +V LA D R+ T
Sbjct: 244 PYQTFQTSDGWIIVAVGNDGQFRKFVEVGGRPELADDDRFAT 285
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 71/139 (51%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V LA D R+ T RV NRELL + + + W+ + P +N
Sbjct: 268 FVEVGGRPELADDDRFATNPARVRNRELLVPMLADMVRVQGKQRWIAALEAAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ +VF +E + L ++ H G +K+V + + T P+ + PP LGEHT+ VL
Sbjct: 328 NLDEVFDNEQVVARALQVDLPHPSGGTVKLVRNPINMTGTPPQALSHPPLLGEHTEQVLS 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
DLL YD TIA+LK K ++
Sbjct: 388 DLLGYDAQTIAELKRKTVI 406
>gi|146309442|ref|YP_001189907.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
mendocina ymp]
gi|145577643|gb|ABP87175.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
mendocina ymp]
Length = 407
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 193/294 (65%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+C +L DLGAEVIKVE+P +GD+ R WGPP++ N++ +
Sbjct: 5 LSHIRVLDLSRVLAGPWCGQILGDLGAEVIKVERPGSGDDTRHWGPPYIKDAEGNDSREA 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NRNK+S+ +DF PEGQ+++++L QCDVL+ENF G L L Y+ L IN
Sbjct: 65 AYFQSANRNKQSLTLDFTQPEGQRLVRELVAQCDVLLENFKVGGLAAYGLDYESLKAINP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 125 RLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPEGEEGAGPMKVGVALTDILTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA V+AAL + ++G GQ ID LL QV+ L N NYL G+ +R G +H N+V
Sbjct: 185 LYATVGVLAALNQREQSGIGQHIDVALLDVQVACLANQAMNYLATGVSPRRLGNAHPNIV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F +++G + G+D Q++ C+V L LA DPR+ T +A + LI
Sbjct: 245 PYQDFPSADGNFILAVGNDGQFRKFCEVAGLPALADDPRFSTNKARVAHRAELI 298
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 71/139 (51%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V L LA DPR+ T RV +R L + T+ KTT +W+ + + P +N
Sbjct: 269 FCEVAGLPALADDPRFSTNKARVAHRAELIPLLRQATVFKTTTQWIELLEKAGVPCGPIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ QVFAD +Q L ++ + V + S T R+ PP LG+HT+ +L+
Sbjct: 329 DLQQVFADPQVQARGLRIDLPNAMGSTTPQVASPLRLSATPVAYRSAPPLLGQHTEALLQ 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
LL ET +A+L+E ++
Sbjct: 389 RLLGMSETQVAELREAGVI 407
>gi|402566788|ref|YP_006616133.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
cepacia GG4]
gi|402247985|gb|AFQ48439.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
cepacia GG4]
Length = 413
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 135/282 (47%), Positives = 186/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELST---- 272
LS++R+LDLTR++AGP+C LAD GA+VIKVE+P GD+ R WGPP+L + +
Sbjct: 11 LSHIRVLDLTRVLAGPWCAQTLADFGADVIKVERPGAGDDTRHWGPPYLQDAAGADTAEA 70
Query: 273 -YFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV VD TPEGQQI+++LA Q DV++EN+ G+L + L Y+ L +
Sbjct: 71 AYYLAANRNKRSVTVDIATPEGQQIVRELAAQSDVVLENYKVGQLKKYGLDYESLRAVKP 130
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITG----HPDGPPCKVGIASIDLATG 387
L+YCSVTGFG GPY R GYD I IGG + ITG P G P K G+A DLATG
Sbjct: 131 DLVYCSVTGFGQTGPYAHRAGYDFIVQGIGGFMSITGERDSEPGGGPQKAGVAIADLATG 190
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ AV+AAL H+ ++G+GQ ID LL QV++L N+ N+L +G RWG +H N+V
Sbjct: 191 LYSTIAVLAALAHRDRSGEGQYIDMALLDVQVALLANMNTNFLASGKPPVRWGNAHPNIV 250
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+TS+G++ + G+D Q++ + LA D R+ T
Sbjct: 251 PYQTFQTSDGWIIVAVGNDGQFRKFVEAGGRAELADDERFAT 292
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 65/131 (49%)
Query: 9 HLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFAD 68
LA D R+ T RV +R+ L + + +W+ + P +N + +VF +
Sbjct: 283 ELADDERFATNPARVRHRDTLVPILAELVKTRGKADWIDALEAAGVPCGPINELDEVFDN 342
Query: 69 EHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDET 128
E + L + H D+++V + S T PE RT PP LG T+ VL+D+L YD+
Sbjct: 343 EQVVARGLQVSLPHPCGADVQLVRNPIRMSATPPEARTAPPLLGAQTEDVLRDMLGYDDA 402
Query: 129 TIAKLKEKKIL 139
IA LK K+ +
Sbjct: 403 HIAALKAKQAI 413
>gi|78066023|ref|YP_368792.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
sp. 383]
gi|77966768|gb|ABB08148.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
sp. 383]
Length = 406
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 136/282 (48%), Positives = 186/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
LS++R+LDLTR++AGP+C LAD GA+VIKVE+P GD+ R WGPP+L + T +
Sbjct: 4 LSHIRVLDLTRVLAGPWCAQTLADFGADVIKVERPGAGDDTRHWGPPYLKDADGADTAEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV VD TPEGQQI+++LA Q DV++EN+ G+L + L Y L +
Sbjct: 64 AYYLAANRNKRSVTVDIATPEGQQIVRELAAQSDVVLENYKVGQLKKYGLDYDSLRAVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHIT----GHPDGPPCKVGIASIDLATG 387
L+YCSVTGFG GPY R GYD I IGG + IT G P G P K G+A DLATG
Sbjct: 124 DLVYCSVTGFGQTGPYAHRAGYDFIIQGIGGFMSITGERDGEPGGGPQKAGVAIADLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ AV+AAL H+ +TG+GQ ID LL QV++L N+ N+L +G RWG +H N+V
Sbjct: 184 LYSTIAVLAALAHRDRTGEGQYIDMALLDVQVALLANMNTNFLASGKPPVRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+T +G++ + G+D Q+++ + LA D R+ T
Sbjct: 244 PYQTFQTRDGWIIVAVGNDGQFRNFVEAGGQPGLADDERFAT 285
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 64/130 (49%)
Query: 10 LALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADE 69
LA D R+ T RV +R+ L + + +W+ + P +N + +VF +E
Sbjct: 277 LADDERFATNPSRVRHRDTLVPILAEMVKARDKADWIGALEAAGVPCGPINDLDEVFDNE 336
Query: 70 HIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETT 129
+ + + H D K+V + S T P+ RT PP LG TD VL+D+L YD+
Sbjct: 337 QVVARGMQVSLPHPCGADAKLVRNPIRMSATPPDARTAPPLLGAQTDDVLRDMLGYDDAK 396
Query: 130 IAKLKEKKIL 139
IA L+ K+ +
Sbjct: 397 IAALRAKQAI 406
>gi|107022481|ref|YP_620808.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
cenocepacia AU 1054]
gi|116689430|ref|YP_835053.1| Formyl-CoA transferase [Burkholderia cenocepacia HI2424]
gi|105892670|gb|ABF75835.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
cenocepacia AU 1054]
gi|116647519|gb|ABK08160.1| Formyl-CoA transferase [Burkholderia cenocepacia HI2424]
Length = 406
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 135/282 (47%), Positives = 185/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
LS++R+LDLTR++AGP+C LAD GA+VIKVE+P GD+ R WGPP+L + T +
Sbjct: 4 LSHIRVLDLTRVLAGPWCAQTLADFGADVIKVERPGAGDDTRHWGPPYLKDADGADTAEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +D TPEGQQI+++LA Q DV++EN+ G+L + L Y L +
Sbjct: 64 AYYLAANRNKRSVTIDIATPEGQQIVRELAAQSDVVLENYKVGQLKKYGLDYDSLRAVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHIT----GHPDGPPCKVGIASIDLATG 387
L+YCSVTGFG GPY R GYD I IGG + IT G P G P K G+A DLATG
Sbjct: 124 DLVYCSVTGFGQTGPYAHRAGYDFIVQGIGGFMSITGERDGEPGGGPQKAGVAIADLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ AV+AAL H+ +TG+GQ ID LL QV++L N+ N+L +G RWG +H N+V
Sbjct: 184 LYSTIAVLAALAHRDRTGEGQYIDMALLDVQVALLANMNTNFLASGKPPVRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+T +G++ + G+D Q++ + LA D R+ T
Sbjct: 244 PYQTFQTRDGWIIVAVGNDGQFRKFVEAGGRPELADDERFAT 285
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 65/131 (49%)
Query: 9 HLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFAD 68
LA D R+ T RV +R+ L + + +W+ + P +N + +VF +
Sbjct: 276 ELADDERFATNPSRVRHRDTLVPILAEMVKARGKADWIGALEAAGVPCGPINDLDEVFDN 335
Query: 69 EHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDET 128
E + + + H D+K+V + S T P+ RT PP LG T+ VL+D+L YD+
Sbjct: 336 EQVVARGMQVSLPHPCGADVKLVRNPIRMSATPPDARTAPPLLGAQTEDVLRDMLGYDDV 395
Query: 129 TIAKLKEKKIL 139
IA LK K+ +
Sbjct: 396 RIAALKAKQAI 406
>gi|339326763|ref|YP_004686456.1| acyl-CoA transferase [Cupriavidus necator N-1]
gi|338166920|gb|AEI77975.1| acyl-CoA transferase/carnitine dehydratase [Cupriavidus necator
N-1]
Length = 406
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 135/282 (47%), Positives = 186/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDLTR++AGP+C LAD GA+VIK+E+P GD+ R WGPP+L +T +
Sbjct: 4 LSHLRVLDLTRVLAGPWCAQNLADFGADVIKIERPGAGDDTRTWGPPWLKDEDGRDTAEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV D TPEGQQI+++LA Q DV++EN+ G+L + L Y+ L ++
Sbjct: 64 AYYLAANRNKRSVTCDISTPEGQQIVRELAAQSDVVLENYKVGQLRKYGLDYETLRQVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
LIYCSVTGFG GPY RPGYD I +GG + +TG P G P K G+A DL TG
Sbjct: 124 DLIYCSVTGFGQTGPYAARPGYDFIIQGMGGFMSLTGERDDLPGGGPQKAGVAISDLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
YA AV+AAL H+ +TG+GQ ID LL QV+ML N+ NYL +G +RWG +H N+V
Sbjct: 184 QYATIAVLAALAHRDRTGEGQYIDMALLDVQVAMLANMNTNYLASGEAPRRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+ ++G++ + G+D Q++ LA DPR+ T
Sbjct: 244 PYQTFQAADGWIIVAVGNDGQFRKFVTDGGKPELADDPRFAT 285
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 67/131 (51%)
Query: 9 HLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFAD 68
LA DPR+ T RV NR++L + +T +W+ + P +N++ VF D
Sbjct: 276 ELADDPRFATNPQRVANRDVLVPILAEMVRPRTRAQWIRDLEAAGVPCGPINTLDDVFED 335
Query: 69 EHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDET 128
+ ++ L ++ H G++K+VG + S T P+ PP LGEHTD VL D L Y
Sbjct: 336 DQVKARGLRVDLPHPSAGEVKLVGSPIKMSATPPQALRHPPLLGEHTDTVLADTLGYSPE 395
Query: 129 TIAKLKEKKIL 139
I L+ K +L
Sbjct: 396 QIEALRAKGVL 406
>gi|172060375|ref|YP_001808027.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
ambifaria MC40-6]
gi|171992892|gb|ACB63811.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
ambifaria MC40-6]
Length = 406
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 135/282 (47%), Positives = 185/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELST---- 272
LS++R+LDLTR++AGP+C LAD GA+VIK+E+P GD+ R WGPP+L + +
Sbjct: 4 LSHIRVLDLTRVLAGPWCAQTLADFGADVIKIERPGAGDDTRHWGPPYLKDAAGADTAEA 63
Query: 273 -YFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV VD TPEGQQI+++LA Q DV++EN+ G+L + L Y L +
Sbjct: 64 AYYLAANRNKRSVTVDIATPEGQQIVRELAAQSDVVLENYKVGQLAKYGLDYDSLRAVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITG----HPDGPPCKVGIASIDLATG 387
L+YCSVTGFG GPY R GYD I IGG + ITG P G P K G+A DLATG
Sbjct: 124 DLVYCSVTGFGQTGPYAHRAGYDFIVQGIGGFMSITGERDSEPGGGPQKAGVAIADLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ AV+AAL H+ +TG+GQ ID LL QV++L N+ N+L +G RWG +H N+V
Sbjct: 184 LYSTIAVLAALAHRDRTGEGQYIDMALLDVQVALLANMNTNFLASGKPPVRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+TS+G++ + G+D Q++ + LA D R+ T
Sbjct: 244 PYQTFQTSDGWIIVAVGNDGQFRKFVEAGGRAELADDERFAT 285
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 66/131 (50%)
Query: 9 HLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFAD 68
LA D R+ T RV +R+ L + + +W+ + P +N + +VF +
Sbjct: 276 ELADDERFATNPSRVRHRDTLVPILAEMVKTRGKADWIGTLEAAGVPCGPINELDEVFDN 335
Query: 69 EHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDET 128
E + + + H D+K+V + S+T P+ RT PP LG T+ VL+D+L YD+
Sbjct: 336 EQVVARGMQVSLPHPCGADVKLVRNPIRMSVTPPDARTAPPLLGAQTEDVLRDMLGYDDE 395
Query: 129 TIAKLKEKKIL 139
IA LK K+ +
Sbjct: 396 RIAALKAKQAI 406
>gi|58262970|ref|XP_568895.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|58262972|ref|XP_568896.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134108134|ref|XP_777265.1| hypothetical protein CNBB2500 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259952|gb|EAL22618.1| hypothetical protein CNBB2500 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223545|gb|AAW41588.1| expressed protein [Cryptococcus neoformans var. neoformans JEC21]
gi|57223546|gb|AAW41589.1| expressed protein [Cryptococcus neoformans var. neoformans JEC21]
Length = 453
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 133/288 (46%), Positives = 192/288 (66%), Gaps = 12/288 (4%)
Query: 212 NPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL------ 265
N PL+ ++++DLTRI+AGP TM+L+DLGA+VIK+E P GD+ R W PP
Sbjct: 44 NDDRPLAGIKVVDLTRILAGPLATMMLSDLGADVIKIESPKNGDDTRSWLPPSAPVPPEG 103
Query: 266 ----NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNL 321
+ S YF NRNK+S+ ++ K+ EGQ+IIK L ++ DVLVEN+VPGKL + L
Sbjct: 104 YPRPDLPPESAYFLQANRNKRSLTLNLKSAEGQKIIKKLIEKADVLVENYVPGKLKKFGL 163
Query: 322 GYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIAS 381
++ + E+N +LIYCS+TG+GS GPY PGYD++ + GL+HITG G P KVG+A
Sbjct: 164 SWEEVKEMNPRLIYCSITGYGSTGPYSQSPGYDVVIEAEAGLMHITGEKGGKPVKVGVAV 223
Query: 382 IDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGT 441
D+ TG +A ++AALL + KTGKG +++C+L +Q++ L N+GANYL AG E RWGT
Sbjct: 224 TDVLTGHHAQSGILAALLKRQKTGKGSRVECSLFESQIASLCNIGANYLIAGEEATRWGT 283
Query: 442 SHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCK--VMNLQHLALDPRY 487
SH ++VP+QVF T + ++ + G+D Q+ +C V+N D R+
Sbjct: 284 SHPSIVPYQVFPTKDSFIMLSAGNDSQFAILCSSAVLNKPDWLNDDRF 331
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 80/139 (57%), Gaps = 4/139 (2%)
Query: 4 VMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSIS 63
V+N D R+ + RVE+R+++ IE EKTTEEW G P+A +N+I+
Sbjct: 319 VLNKPDWLNDDRFSSNRKRVEHRDVMIALIEEVLSEKTTEEWCQKLVGKGLPFAPINNIA 378
Query: 64 QVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLL 123
Q F+ ++V+E+ H + G IK+ PAV Y ++P++ PPP LGEHT+ VL +L
Sbjct: 379 QTFSHPQAIAREVVEEVIHPRAGKIKLAAPAVTYDGSKPKLYRPPPYLGEHTEEVLTEL- 437
Query: 124 NYDETTIAKLKEKKILGLI 142
+ ++K+ K+ G+I
Sbjct: 438 ---GCSSGEIKKMKLDGVI 453
>gi|367045152|ref|XP_003652956.1| hypothetical protein THITE_2114834 [Thielavia terrestris NRRL 8126]
gi|347000218|gb|AEO66620.1| hypothetical protein THITE_2114834 [Thielavia terrestris NRRL 8126]
Length = 449
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 194/303 (64%), Gaps = 9/303 (2%)
Query: 207 ALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPF-- 264
A +S + SLPL R+LD+TR++AGP+CT +L DLGAEVIK+E PV GD+ R WGPP+
Sbjct: 36 AAASASGSLPLEGYRVLDMTRVLAGPYCTQILGDLGAEVIKIEHPVRGDDTRAWGPPYAS 95
Query: 265 ------LNNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDR 318
L S YF VNRNKKS+ + F+ P G +I+ LA +CD+LVEN++PG L +
Sbjct: 96 YKSGSSLEGPGESAYFLGVNRNKKSLALSFQDPAGVEILHKLAAKCDILVENYIPGSLKK 155
Query: 319 LNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVG 378
L ++ + +IN LIY S+TG+G GPY R GYD++ + GL+HITG DGPP KVG
Sbjct: 156 YGLDFETIHKINPGLIYASITGYGQTGPYSQRAGYDVMVEAEFGLMHITGSRDGPPVKVG 215
Query: 379 IASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAG-IEGK 437
+A DL TGLYA ++MAALL + KTGKGQ ID L Q L N+ ++ L +G +
Sbjct: 216 VAVTDLTTGLYASNSIMAALLARAKTGKGQHIDAALSDCQTVTLANIASSCLISGEKDSG 275
Query: 438 RWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMT 497
RWGT+H ++VP++ FKT +G V G G+D+ + +C + DP++ T A +A
Sbjct: 276 RWGTAHPSIVPYRSFKTKDGDVLFGGGNDRLFGILCDGLGRPEWKEDPKFKTNASRVANR 335
Query: 498 SHL 500
L
Sbjct: 336 DEL 338
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 82/139 (58%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + DP++ T A RV NR+ L EIE T+ +TT++WL +F+G PYA VN
Sbjct: 310 LCDGLGRPEWKEDPKFKTNASRVANRDELEAEIEKITVTRTTQQWLEVFEGKGMPYAAVN 369
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ EH + +V E+ H + G IK++ + YS ++P +R+PPP LG+HTD +L+
Sbjct: 370 DVLGTLTHEHTKARNMVVEVEHGECGTIKLLNTPIKYSESKPRIRSPPPTLGQHTDEILR 429
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ L + I +L+ K ++
Sbjct: 430 EHLAMGDAQIQELRSKGVI 448
>gi|339492551|ref|YP_004712844.1| putative lipid metabolism-like protein [Pseudomonas stutzeri ATCC
17588 = LMG 11199]
gi|386019134|ref|YP_005937158.1| putative lipid metabolism-related protein [Pseudomonas stutzeri DSM
4166]
gi|327479106|gb|AEA82416.1| putative lipid metabolism-related protein [Pseudomonas stutzeri DSM
4166]
gi|338799923|gb|AEJ03755.1| putative lipid metabolism-related protein [Pseudomonas stutzeri
ATCC 17588 = LMG 11199]
Length = 407
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 140/294 (47%), Positives = 190/294 (64%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+C +L DLGAEVIKVE+P TGD+ R WGPP+L NT +
Sbjct: 5 LSHIRVLDLSRVLAGPWCGQILGDLGAEVIKVERPGTGDDTRHWGPPYLKDQHGENTSEA 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+S+ VDF PEGQ+II++L QCDVL+ENF G L L Y+ L IN
Sbjct: 65 AYYLTANRNKQSLTVDFTRPEGQRIIRELVAQCDVLLENFKVGGLAAYGLDYESLKAINP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG D P KVG+A D+ TG
Sbjct: 125 RLIYCSITGFGQDGPYATRAGYDFMIQGLGGLMSLTGRSDAEEGAGPVKVGVALTDILTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA V+AAL H+ ++G+GQ ID LL QV+ L N NYL G+ +R G +H N+V
Sbjct: 185 LYATVGVLAALAHRERSGEGQHIDTALLDVQVACLGNQALNYLTTGVAPRRMGNAHPNIV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + + G+D Q++ C+V A D R+ T +A + LI
Sbjct: 245 PYQDFPTADGDIILTVGNDGQFRKFCEVAGRPEWAADARFATNRARVAHRAELI 298
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 68/139 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V A D R+ T RV +R L I T+ +TT EW+ + P +N
Sbjct: 269 FCEVAGRPEWAADARFATNRARVAHRAELIPLIRQVTVFRTTAEWVSALEQAGVPCGPIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD +Q L E+ H G + V + S + R PPP LGEH++ +L+
Sbjct: 329 DLAQVFADPQVQHRGLSVEMPHPLAGRVPQVASPLRLSASPVAYRNPPPLLGEHSEALLQ 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
LL ++ IA L+ ++
Sbjct: 389 RLLGMNDEQIAGLRAAGVI 407
>gi|410422200|ref|YP_006902649.1| hypothetical protein BN115_4430 [Bordetella bronchiseptica MO149]
gi|427820211|ref|ZP_18987274.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
gi|408449495|emb|CCJ61186.1| conserved hypothetical protein [Bordetella bronchiseptica MO149]
gi|410571211|emb|CCN19431.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
Length = 420
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 135/280 (48%), Positives = 189/280 (67%), Gaps = 9/280 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL-----S 271
LS+VR+LDLTR++AGP+CT +LADLGA+VIKVE+PV GD+ R WGPP++ N + S
Sbjct: 5 LSHVRVLDLTRVLAGPWCTQMLADLGADVIKVERPVLGDDTRHWGPPWIENDDGERVGDS 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YFT NRNK+S+ +D TP+GQ ++++LA+QCDVLVEN+ G L R L Y L E+N
Sbjct: 65 AYFTSANRNKRSIAIDIATPQGQALVRELAQQCDVLVENYKVGDLARYGLSYADLRELNP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TG+G GPY PGYD I GGL+ ITG P G P K IA D+ TG
Sbjct: 125 RLVYCSITGYGQDGPYAHLPGYDFIFQGEGGLMSITGERDDKPGGGPMKSAIAVADVLTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
L A +++A+ ++ TG GQ ID LL T V+ N A+Y +G+ +RWG H N+
Sbjct: 185 LNATIGILSAIESRHATGVGQHIDVALLDTVVNFGANQIASYFASGVLPRRWGNEHPNLA 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
P+Q F T++G++ IG G+D Q++ +C+++ LA DPR+
Sbjct: 245 PYQTFPTADGHIIIGCGNDGQFRRLCELIGCPELAGDPRF 284
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+++ LA DPR+ R NR L + +EA+ + + WL + P +N
Sbjct: 269 LCELIGCPELAGDPRFADMPGRNVNRAALVEALEARFRTQPSRHWLDLLANSEVPNGSIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ +QVF + + ++ H + +V + S T + R PPP G+HT VL
Sbjct: 329 NYAQVFEHPQVVHRGMRVDMPHPGGTTVGMVANPIRLSGTPVQYRYPPPLRGQHTAEVLA 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
LL+ I L+ +I+
Sbjct: 389 SLLHKSGADIEALEAARII 407
>gi|407781990|ref|ZP_11129206.1| L-carnitine dehydratase/bile acid-inducible protein F
[Oceanibaculum indicum P24]
gi|407207029|gb|EKE76973.1| L-carnitine dehydratase/bile acid-inducible protein F
[Oceanibaculum indicum P24]
Length = 409
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 133/285 (46%), Positives = 192/285 (67%), Gaps = 9/285 (3%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTEL 270
PLS++++LDL+R++AGP+ T LAD+GA VIKVE+P GD+ R WGPP+L + L
Sbjct: 6 PLSHIKVLDLSRVLAGPWATQFLADMGAYVIKVERPGAGDDTRGWGPPYLVEPTEEDPGL 65
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
S Y+ NR K+S+ VD + EGQ++I+ LA +CDV+VEN+ G L + L Y L ++N
Sbjct: 66 SAYYLACNRGKRSITVDMASAEGQELIRRLAAECDVVVENYKVGGLAKYGLDYASLRQVN 125
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDG----PPCKVGIASIDLAT 386
+LI+CS+TGFG GPY R GYD + ++ GL+ ITG PDG P KVG+A D
Sbjct: 126 PKLIWCSITGFGQTGPYAKRAGYDFLVQAMSGLMSITGQPDGMPGAEPMKVGVAISDQIC 185
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANV 446
GLY+ A++ A++ + +TG G+ ID LL TQ++ L N NYL +G+ R G +H NV
Sbjct: 186 GLYSLSAILTAIIKRDRTGAGEYIDMALLDTQIATLANQATNYLVSGVAPGRMGNAHPNV 245
Query: 447 VPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
VP+QVF+T++G++ +G G+D Q+Q C V+ +HL+ DPRY T A
Sbjct: 246 VPYQVFRTADGHMILGVGNDGQFQRFCAVVGAEHLSGDPRYKTNA 290
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 73/140 (52%), Gaps = 2/140 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C V+ +HL+ DPRY T A R+ NRE L ++ +++TT +W+ + + + P +N
Sbjct: 271 FCAVVGAEHLSGDPRYKTNAGRIVNRETLIPQVAEIVLQRTTSDWVSLLENHAVPCGPIN 330
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I QVFAD ++ L + ++ ++ VG V ++ PP LG TD VL+
Sbjct: 331 DIGQVFADPQVEARGLKRVLTSPAAPEVPQVGNPVKFASGPTSSDRSPPTLGADTDDVLR 390
Query: 121 DLLNYDETTIAKLKEKKILG 140
++L + I +L K LG
Sbjct: 391 EILGVSDGEITRL--AKALG 408
>gi|393778054|ref|ZP_10366337.1| acyl-CoA transferase/carnitine dehydratase [Ralstonia sp. PBA]
gi|392714940|gb|EIZ02531.1| acyl-CoA transferase/carnitine dehydratase [Ralstonia sp. PBA]
Length = 406
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 134/282 (47%), Positives = 182/282 (64%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDLTRI+AGP+C LAD GA+VIK+E+P GD+ R WGPP+L N+T +
Sbjct: 4 LSHIRVLDLTRILAGPWCAQNLADFGADVIKIERPGAGDDTRTWGPPYLRDPEGNDTAEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +D +PEGQ +I+DL DV++EN+ G+L + L Y L I
Sbjct: 64 AYYLAANRNKRSVTIDIASPEGQAVIRDLVAHSDVVLENYKVGQLKKYGLDYDSLRAIKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
LIYCS+TGFG GPY R GYD I +GG + ITG P G P K GIA DL TG
Sbjct: 124 DLIYCSITGFGQTGPYAARAGYDFIIQGMGGFMSITGERDALPGGGPQKAGIAISDLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA V+AAL H+ +TG+GQ ID LL QV+ML N+ NYL +G RWG +H N+V
Sbjct: 184 MYATIGVLAALAHRDRTGEGQYIDMALLDVQVAMLANMNTNYLASGQAPGRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+T++ ++ + G+D Q++ + LA DPR+ T
Sbjct: 244 PYQAFRTADSWIILAVGNDGQFRKFAQAAGAPELADDPRFAT 285
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 69/134 (51%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+ LA DPR+ T RV +R++L +I A +++ +W+ + P +N
Sbjct: 268 FAQAAGAPELADDPRFATNPERVRHRDMLVPQIAALIEKRSKSDWIATLERAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ +VF D + L ++ H +K+VG V S T + PP LGEHT+ VL+
Sbjct: 328 TLDEVFEDPQVVARGLRVDLPHPTAELVKLVGSPVRMSGTPAQAMRHPPLLGEHTESVLR 387
Query: 121 DLLNYDETTIAKLK 134
++L YD+ IA L+
Sbjct: 388 EVLGYDDGRIAALR 401
>gi|163855106|ref|YP_001629404.1| hypothetical protein Bpet0801 [Bordetella petrii DSM 12804]
gi|163258834|emb|CAP41133.1| unnamed protein product [Bordetella petrii]
Length = 407
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 139/295 (47%), Positives = 189/295 (64%), Gaps = 9/295 (3%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTEL 270
PL +R+LDL+RI+AGP+CT LADLGA+VIKVE+P TGD+ R WGPP+L +T
Sbjct: 7 PLEGIRVLDLSRILAGPWCTQNLADLGADVIKVERPGTGDDTRHWGPPYLKDGQGRDTAE 66
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
+ Y+ NRNK+S+ D TP+G +I++LA CD+LVENF G L + L Y L EIN
Sbjct: 67 AAYYLSANRNKRSLEADIATPQGAALIRELAAHCDILVENFKVGGLRKYGLDYDSLREIN 126
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLAT 386
+LIYCSVTGFG GP PGYD + +GGL+ ITG P G P K G+A D+ T
Sbjct: 127 PRLIYCSVTGFGQDGPCAQLPGYDFMIQGLGGLMSITGERDDLPGGGPQKAGVAVTDIIT 186
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANV 446
G+YA A++AAL ++++G GQ +D LL V+ML N +NY +G+ R G +H NV
Sbjct: 187 GMYASVAILAALQERHRSGLGQHLDIALLDCHVAMLANQNSNYFASGVAPTRAGNAHQNV 246
Query: 447 VPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
VP+QVF S+G++ + TG++ QY+ CK + L DPR+ T L + LI
Sbjct: 247 VPYQVFAASDGHLIVATGNESQYRAYCKAIGAPELGDDPRFATNRLRVTNREELI 301
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 65/135 (48%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
CK + L DPR+ T LRV NRE L + + ++W+ + V P +N+
Sbjct: 273 CKAIGAPELGDDPRFATNRLRVTNREELIALLSDIMKQGRRDDWIARLEAVGVPCGPINN 332
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
I+Q FA +Q +L +E+ H G + + +S T R PP LGEHT +L++
Sbjct: 333 IAQAFAHPQVQARQLRRELPHPLGGTAAVTASPLRFSATPVVYRRAPPLLGEHTAEILRE 392
Query: 122 LLNYDETTIAKLKEK 136
+L + IA +
Sbjct: 393 VLGKSDPEIAAATAR 407
>gi|340960450|gb|EGS21631.1| hypothetical protein CTHT_0034950 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1030
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 136/298 (45%), Positives = 192/298 (64%), Gaps = 9/298 (3%)
Query: 207 ALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL- 265
A+ + + +LPL R+LD+TR++AGP+CT +L DLGAEVIK+E P+ GD+ R WGPP+
Sbjct: 29 AVMAADGTLPLEGYRVLDMTRVLAGPYCTQILGDLGAEVIKIEHPIRGDDTRAWGPPYAP 88
Query: 266 -------NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDR 318
S YF VNRNKKS+ + F+ P G +I+ LA +CD+LVEN++PG L +
Sbjct: 89 YKSSSAHQGPGESAYFLGVNRNKKSLALSFQDPAGVEILHKLAAKCDILVENYIPGSLKK 148
Query: 319 LNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVG 378
L Y+ + +IN L+Y S+TG+G GPY R GYD++ + GL+HITG DGPP KVG
Sbjct: 149 YGLDYETIHKINPSLVYASITGYGQTGPYSQRAGYDVMVEAEFGLMHITGTRDGPPVKVG 208
Query: 379 IASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAG-IEGK 437
+A DL TGLY ++MAAL+ + KTGKGQ ID L Q L N+ ++ L +G +
Sbjct: 209 VAVTDLTTGLYTCTSIMAALIARAKTGKGQHIDAALSDCQTVTLANIASSCLISGEKDTG 268
Query: 438 RWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILA 495
RWGT+H ++VP++ FKT +G V G G+D+ + +C + DPRY T AL +A
Sbjct: 269 RWGTAHPSIVPYRAFKTKDGDVLFGGGNDRLFGILCDGLGCPEWKDDPRYKTNALRVA 326
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 84/139 (60%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + DPRY T ALRV NR+ L EIE T+ KTT+EWL +F+G PYA VN
Sbjct: 303 LCDGLGCPEWKDDPRYKTNALRVANRDELETEIEKITVTKTTQEWLEVFEGKGMPYAAVN 362
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I EH + +V E+ H + G IK++ + +S T+P++R+PPP LG+HTD +L+
Sbjct: 363 DIQGTLNHEHTKARNMVTEVEHPECGPIKLLNSPIKFSETKPKIRSPPPTLGQHTDEILR 422
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ L E I L+++ I+
Sbjct: 423 EHLGMSEHEIKSLRDRGII 441
>gi|338989256|ref|ZP_08634119.1| L-carnitine dehydratase/bile acid-inducible protein F [Acidiphilium
sp. PM]
gi|338205809|gb|EGO94082.1| L-carnitine dehydratase/bile acid-inducible protein F [Acidiphilium
sp. PM]
Length = 409
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 136/287 (47%), Positives = 180/287 (62%)
Query: 209 SSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNT 268
+ +PS PL+ + + DLTR++AGP C +LADLGAEVIK+E+P +GD+ R + PP L T
Sbjct: 8 GTASPSGPLAGLTVFDLTRVLAGPTCVQMLADLGAEVIKIEKPGSGDDTRGFAPPALPGT 67
Query: 269 ELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSE 328
E S YF NRNK+SV +D PEGQ++ + L + D+LVENF G L R LGY L
Sbjct: 68 EQSAYFAGANRNKRSVTLDIAKPEGQKLARALIAKSDILVENFKVGTLPRYGLGYDDLRA 127
Query: 329 INSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGL 388
N LIYCS+TGFG GPY RPGYD + ++GG++ +TG PDG P KVG+ DL GL
Sbjct: 128 DNPGLIYCSITGFGQTGPYASRPGYDSLIQAMGGIMSLTGVPDGQPMKVGVPVADLFAGL 187
Query: 389 YAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVP 448
Y V+AAL H+ G+GQ ID +L T V+ L N G NYL G R G H N+VP
Sbjct: 188 YGAIGVLAALRHREIAGQGQHIDIGMLDTHVAWLANQGMNYLATGKNPPRLGNEHPNIVP 247
Query: 449 HQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILA 495
+QVF T +G++ + G+D + C L+HL D R+ T A +A
Sbjct: 248 YQVFATEDGHIVLSIGNDPTFARFCNAFGLEHLLADERFATNAARVA 294
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 66/139 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C L+HL D R+ T A RV NR + + A + WL + + +N
Sbjct: 271 FCNAFGLEHLLADERFATNAARVANRAFVTDTLAAVLARHPSAWWLERLEELKIGCGPIN 330
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ QVFAD H+ + E++ +K+V V S T + R PP LGEHTD VL
Sbjct: 331 TLEQVFADPHVIARGNLIEMTRSDGVPVKLVANPVRLSETPVDYRLAPPMLGEHTDEVLT 390
Query: 121 DLLNYDETTIAKLKEKKIL 139
++L DE A L+ I+
Sbjct: 391 NMLGLDEPARAALRRDGII 409
>gi|339322632|ref|YP_004681526.1| acyl-CoA transferase/carnitine dehydratase [Cupriavidus necator
N-1]
gi|338169240|gb|AEI80294.1| acyl-CoA transferase/carnitine dehydratase [Cupriavidus necator
N-1]
Length = 432
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 141/282 (50%), Positives = 191/282 (67%), Gaps = 10/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
LS++R+LDL+R++AGP+ T LAD+GA+VIK+E+P GD+ R WGPPFL + T +
Sbjct: 22 LSHLRVLDLSRVLAGPWSTQNLADMGADVIKIEKPGEGDDTRHWGPPFLADEAGAPTRQA 81
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YFT NRNK+SV VD TPEGQ++I++LA+Q DV+VENF G L R L Y LS +N
Sbjct: 82 CYFTAANRNKRSVTVDMATPEGQELIRELARQSDVVVENFKTGGLKRYGLDYDSLSALNP 141
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+LIYCSVTGFG GPY RPGYD++ ++ GL+ ITGH P G P KVG+A IDL TG
Sbjct: 142 RLIYCSVTGFGHTGPYAARPGYDLLIQAMSGLMSITGHADGEPGGGPMKVGVAVIDLFTG 201
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA A+++AL ++ TG+GQ ID LL +++L N GA +LNAG +R G H +VV
Sbjct: 202 MYATTAILSALEARHFTGRGQHIDIALLDVAMAVLANQGAGFLNAGDVPRRQGNIHPSVV 261
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F T++G + + G+D Q+ C + A D RY T
Sbjct: 262 PYQDFPTADGNMLLAIGNDGQFARFCDAAGVD-WARDERYAT 302
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 13/140 (9%)
Query: 11 ALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEH 70
A D RY T RV NR+ L + T ++T EW+ + + S P +N+I+Q AD H
Sbjct: 295 ARDERYATNTGRVNNRKTLIAMMMELTRTRSTAEWVTLLEANSVPCGPINNIAQAHADPH 354
Query: 71 IQDIKLVKEISHEKY-----------GDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVL 119
+Q L + E+Y + + S T P +R PPALG+HTD VL
Sbjct: 355 VQHRGL--RVEQERYPGAQPPAGESVNQVVTAASPLRLSETPPTLRYAPPALGQHTDEVL 412
Query: 120 KDLLNYDETTIAKLKEKKIL 139
++ L + L+ ++++
Sbjct: 413 REYLKLSPQQLEALRARRVV 432
>gi|163854672|ref|YP_001628970.1| acyl-CoA transferase [Bordetella petrii DSM 12804]
gi|163258400|emb|CAP40699.1| Predicted acyl-CoA transferase/carnitine dehydratase [Bordetella
petrii]
Length = 409
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 134/289 (46%), Positives = 191/289 (66%), Gaps = 10/289 (3%)
Query: 210 SENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-- 267
S+ P+ PL+ +R+LDLTR++AGP+CT LADLGAEVIK+E+P GD+ R WGPP+L +
Sbjct: 2 SQRPA-PLTGIRVLDLTRVLAGPWCTQNLADLGAEVIKIERPGAGDDTRAWGPPYLKDAA 60
Query: 268 ---TELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYK 324
T + Y+ NRNK SV +D +P G +++++LA+Q D+LVENF G L + L Y
Sbjct: 61 GADTTEAAYYLSANRNKYSVALDIASPRGAELVRELARQSDILVENFKVGGLRKYGLDYD 120
Query: 325 HLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIA 380
L N LIYCS+TGFG GPY RPGYD + +GGL+ ITG P G P K G+A
Sbjct: 121 TLKADNPGLIYCSITGFGQTGPYASRPGYDFMIQGMGGLMSITGERDDLPGGGPQKAGVA 180
Query: 381 SIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWG 440
DL TG+Y+ ++AAL + ++G GQ ID LL QV+M+ N NY+ +G +R G
Sbjct: 181 VADLMTGMYSTVGILAALHERGRSGLGQHIDMALLDCQVAMMANQNLNYMTSGQAPRRAG 240
Query: 441 TSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+H N+VP+QVF S+G++ + G+D Q+++ C+V+ L L+ DPR+ T
Sbjct: 241 NAHQNLVPYQVFAASDGHLIVAVGNDSQFRNYCRVIGLPELSADPRFAT 289
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 66/136 (48%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C+V+ L L+ DPR+ T RV+NR+ L + + + WL + P +N+
Sbjct: 273 CRVIGLPELSADPRFATNPQRVQNRDALVPLLAERMATGERDHWLAELESAGVPAGPINT 332
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
+ QV+ D +Q ++ +E+ H G + I + S + + R P P LGEHT VL +
Sbjct: 333 LDQVYQDPQVQAREMRRELPHPTAGTVPIAASPLKLSGSPVQYRRPAPLLGEHTRQVLAE 392
Query: 122 LLNYDETTIAKLKEKK 137
L + I L + +
Sbjct: 393 RLGLSDEEIQALAQPR 408
>gi|421502316|ref|ZP_15949270.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
mendocina DLHK]
gi|400346748|gb|EJO95104.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
mendocina DLHK]
Length = 407
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 193/294 (65%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+C +L DLGAEVIKVE+P +GD+ R WGPP++ N++ +
Sbjct: 5 LSHIRVLDLSRVLAGPWCGQILGDLGAEVIKVERPGSGDDTRHWGPPYIKDAEGNDSREA 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NRNK+S+ +DF PEGQ+++++L QCDVL+ENF G L L Y+ L IN
Sbjct: 65 AYFQSANRNKQSLTLDFTQPEGQRLVRELVAQCDVLLENFKVGGLAAYGLDYESLKVINP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 125 RLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPEGEEGAGPMKVGVALTDILTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA V+AAL + ++G GQ ID LL QV+ L N NYL G+ +R G +H N+V
Sbjct: 185 LYATVGVLAALNQREQSGIGQHIDVALLDVQVACLANQAMNYLATGVSPRRLGNAHPNIV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F +++G + G+D Q++ C+V L LA DPR+ T +A + LI
Sbjct: 245 PYQDFPSADGNFILAVGNDGQFRKFCEVAGLPALADDPRFSTNKARVAHRAELI 298
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 70/139 (50%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V L LA DPR+ T RV +R L + T+ KTT +W+ + + P +N
Sbjct: 269 FCEVAGLPALADDPRFSTNKARVAHRAELIPLLRQATVFKTTTQWIELLEKAGVPCGPIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ QVF D +Q L ++ + V + S T R+ PP LG+HT+ +L+
Sbjct: 329 DLQQVFVDPQVQARGLRIDLPNAMGSTTPQVASPLRLSATPVAYRSAPPLLGQHTEALLQ 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
LL ET +A+L+E ++
Sbjct: 389 RLLGMSETQVAELREAGVI 407
>gi|312958215|ref|ZP_07772738.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
fluorescens WH6]
gi|311287646|gb|EFQ66204.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
fluorescens WH6]
Length = 406
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 140/294 (47%), Positives = 190/294 (64%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWAGQILADLGAEVIKVERPGNGDDTRAWGPPFLKDAHGENTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ++++DLA + D+L+ENF G L L Y+ L EIN
Sbjct: 64 AYYLSANRNKESVTIDFTRPEGQKLVRDLAAKSDILIENFKVGGLAAYGLDYESLKEINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 ELIYCSITGFGQTGPYAARAGYDFMIQGLGGLMSLTGRPEGDEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ G GQ ID LL QV+ L N NYL G+ KR G +H N+V
Sbjct: 184 LYSTVAILAALAHRDHDGGGQHIDMALLDVQVACLANQAMNYLTTGVAPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V H A DPR+ T +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAEVAGQPHWADDPRFSTNKARVANRAQLI 297
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 70/139 (50%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V H A DPR+ T RV NR L I T+ KTT EW+ + V P +N
Sbjct: 268 FAEVAGQPHWADDPRFSTNKARVANRAQLIPLIRQATVFKTTAEWVSALERVGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD H++ L ++ H G + V + S T E R+ PP LGEHT VL+
Sbjct: 328 DLAQVFADPHVRARGLAMQLPHALAGMVPQVASPIRLSKTPVEYRSAPPLLGEHTAQVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L +A L+E ++
Sbjct: 388 GVLGLAPANVAALREAGVI 406
>gi|260433080|ref|ZP_05787051.1| caib/baif family protein [Silicibacter lacuscaerulensis ITI-1157]
gi|260416908|gb|EEX10167.1| caib/baif family protein [Silicibacter lacuscaerulensis ITI-1157]
Length = 394
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 133/280 (47%), Positives = 189/280 (67%), Gaps = 6/280 (2%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTG-DECRKWGPPFL-----NNTE 269
PL V++LDL+RI+AGP CT LL DLGA VIKVE P TG D+ R+WGPP++ N T+
Sbjct: 7 PLKGVKVLDLSRILAGPTCTQLLGDLGASVIKVENPATGGDDTRQWGPPYVTDADGNPTD 66
Query: 270 LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEI 329
LS YF NRNKKSV +D TPEGQ+ I+ LA D+L+ENF PG L + L ++ LS
Sbjct: 67 LSAYFMAANRNKKSVAIDIATPEGQEQIRWLASHADILIENFKPGGLAKYGLDHETLSRE 126
Query: 330 NSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLY 389
LIYCS++G+G GP +PGYD++A GG++ +TG PDG P KVG+ D+ G+Y
Sbjct: 127 FPGLIYCSISGYGQTGPNAAKPGYDLMAQGYGGIMSLTGEPDGAPMKVGVGIADVMCGMY 186
Query: 390 AHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPH 449
A ++AAL H+ +TG+GQ+ID L+ +Q++ LIN G NYL +G +R G H N+VP+
Sbjct: 187 ATVGILAALRHRDQTGEGQQIDIALVDSQIAWLINEGVNYLTSGQVPQRRGNGHPNIVPY 246
Query: 450 QVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
V++ ++G+V + G+D Q++ C ++L L+ D R+ T
Sbjct: 247 DVYEAADGHVILAVGNDGQFRRFCGFLDLDQLSDDARFAT 286
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 53/119 (44%), Gaps = 1/119 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C ++L L+ D R+ T R+E+R+ L + T+ + + + P V
Sbjct: 269 FCGFLDLDQLSDDARFATNPARLEHRDALNAVLRPALRRLETKAVIEGLEALKVPVGPVQ 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVL 119
++ QVFA + + ++ ++ + +K++G + S T R PP G T VL
Sbjct: 329 TLDQVFASDQVAARQMQIDMQADP-APVKLIGNPLKLSRTPVTYRAAPPTFGADTQAVL 386
>gi|449680197|ref|XP_002169400.2| PREDICTED: caiB/baiF CoA-transferase family protein C7orf10-like,
partial [Hydra magnipapillata]
Length = 284
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 132/260 (50%), Positives = 191/260 (73%), Gaps = 5/260 (1%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L+ +R+ D+TR++AGP+CTM+L D+GAEVIKVE+P GD+ R +GPP++ S Y+
Sbjct: 26 LNGIRVCDMTRVLAGPYCTMILGDMGAEVIKVERPGIGDDTRHFGPPYVGGE--SCYYLA 83
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
VNRNKKS+ VDF T EG +II++LAK DV +EN++ GKLD + LGY+ L IN +LIYC
Sbjct: 84 VNRNKKSIAVDFHTKEGVEIIQELAKTSDVFIENYIYGKLDAVGLGYETLKAINPRLIYC 143
Query: 337 SVTGFGSKGPYKD--RPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAV 394
S+TG+GS+G D +PGYD++A+SIGGL +TG DG PC+VG+A D+ TG+YAHGA+
Sbjct: 144 SITGYGSRGLLSDIVKPGYDLVASSIGGLNAVTGPEDGEPCRVGVAVTDIMTGMYAHGAI 203
Query: 395 MAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKT 454
+AAL + T G KID +LL TQV+++ ++G+++LNAG++ R+GT H +VP+Q F+
Sbjct: 204 LAALYQREITKLGTKIDTSLLQTQVAVMSHIGSDFLNAGVKAPRYGTGHRAIVPYQAFEA 263
Query: 455 SNGYV-TIGTGSDKQYQDMC 473
+G + IG +D +Q C
Sbjct: 264 GDGQMFVIGVANDNLFQKFC 283
>gi|167587423|ref|ZP_02379811.1| Formyl-CoA transferase [Burkholderia ubonensis Bu]
Length = 406
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 135/282 (47%), Positives = 185/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
LS++R+LDLTR++AGP+C LAD GA+VIKVE+P GD+ R WGPP+L + T +
Sbjct: 4 LSHIRVLDLTRVLAGPWCAQTLADFGADVIKVERPGAGDDTRHWGPPYLKDANGADTAEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV VD TPEGQ+I+++LA Q DV++EN+ G+L + L Y L +
Sbjct: 64 AYYLAANRNKRSVTVDIATPEGQRIVRELAAQSDVVLENYKVGQLKKYGLDYASLRAVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHIT----GHPDGPPCKVGIASIDLATG 387
L+YCSVTGFG GPY R GYD I IGG + IT G P G P K G+A DLATG
Sbjct: 124 DLVYCSVTGFGQTGPYAHRAGYDFIIQGIGGFMSITGERDGEPGGGPQKAGVAISDLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ AV+AAL H+ +TG+GQ ID LL QV++L N+ N+L +G RWG +H N+V
Sbjct: 184 LYSTIAVLAALAHRDRTGEGQYIDMALLDVQVALLANMNTNFLASGKPPVRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+T +G++ + G+D Q++ + LA D R+ T
Sbjct: 244 PYQTFQTRDGWIIVAVGNDGQFRKFVEAGGRAELADDERFAT 285
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 66/131 (50%)
Query: 9 HLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFAD 68
LA D R+ T RV +RE L + + W+ + P +N + +VF D
Sbjct: 276 ELADDERFATNPARVRHRETLVPILADMVRTLDKDAWIAALEAAGVPCGPINDLEEVFDD 335
Query: 69 EHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDET 128
E + + E+ H ++K+V + S T P+ R+ PP LG HTD VL++LL YD+
Sbjct: 336 EQVVARGMQVELPHPCGANVKLVRNPIRMSATPPDARSAPPLLGAHTDAVLRELLGYDDE 395
Query: 129 TIAKLKEKKIL 139
IA LK K+ +
Sbjct: 396 RIAALKAKQAI 406
>gi|116695315|ref|YP_840891.1| acyl-CoA transferase/carnitine dehydratase [Ralstonia eutropha H16]
gi|113529814|emb|CAJ96161.1| predicted acyl-CoA transferase/carnitine dehydratase [Ralstonia
eutropha H16]
Length = 432
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 141/282 (50%), Positives = 191/282 (67%), Gaps = 10/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
LS++R+LDL+R++AGP+ T LAD+GA+VIK+E+P GD+ R WGPPFL + T +
Sbjct: 22 LSHLRVLDLSRVLAGPWSTQNLADMGADVIKIEKPGEGDDTRHWGPPFLADEAGAPTRQA 81
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YFT NRNK+SV VD TPEGQ++I++LA+Q DV+VENF G L R L Y LS +N
Sbjct: 82 CYFTAANRNKRSVTVDMATPEGQELIRELARQSDVVVENFKTGGLKRYGLDYDSLSALNP 141
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+LIYCSVTGFG GPY RPGYD++ ++ GL+ ITGH P G P KVG+A IDL TG
Sbjct: 142 RLIYCSVTGFGHTGPYAARPGYDLLIQAMSGLMSITGHADGEPGGGPMKVGVAVIDLFTG 201
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA A+++AL ++ TG+GQ ID LL +++L N GA +LNAG +R G H +VV
Sbjct: 202 MYATTAILSALEARHFTGRGQHIDIALLDVAMAVLANQGAGFLNAGDVPRRQGNIHPSVV 261
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F T++G + + G+D Q+ C + A D RY T
Sbjct: 262 PYQDFPTADGNMLLAIGNDGQFARFCDAAGVD-WARDERYAT 302
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 13/140 (9%)
Query: 11 ALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEH 70
A D RY T RV NR+ L + T ++T +W+ + + S P +N+I+Q AD H
Sbjct: 295 ARDERYATNTGRVNNRKTLIAMMMELTRTRSTAQWVALLEANSVPCGPINNIAQAHADPH 354
Query: 71 IQDIKLVKEISHEKY-GDIKIVGPAVAY----------SLTQPEVRTPPPALGEHTDYVL 119
+Q L + E+Y G G V + S T P +R PPALG+HTD VL
Sbjct: 355 VQHRGL--RVEQERYPGAQPPAGEPVNHVVTTASPLRLSETPPTLRYAPPALGQHTDEVL 412
Query: 120 KDLLNYDETTIAKLKEKKIL 139
+D L + L+ ++++
Sbjct: 413 RDYLKLSPQQLEALRARRVV 432
>gi|329902131|ref|ZP_08273035.1| L-carnitine dehydratase/bile acid-inducible protein F
[Oxalobacteraceae bacterium IMCC9480]
gi|327548854|gb|EGF33482.1| L-carnitine dehydratase/bile acid-inducible protein F
[Oxalobacteraceae bacterium IMCC9480]
Length = 412
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 135/285 (47%), Positives = 188/285 (65%), Gaps = 9/285 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
L ++RILDLTR++AGP+C ADLGA+VIK+E+P +GD+ R WGPP+L + T +
Sbjct: 10 LGHLRILDLTRVLAGPWCGQTFADLGADVIKIERPGSGDDTRAWGPPYLRDADGKDTTEA 69
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NR K+SV VD T EGQQII++LA DV++EN+ G+L++ L Y L ++
Sbjct: 70 AYYLAANRGKRSVTVDITTTEGQQIIRELAAHSDVVLENYKVGQLEKYGLDYASLKQVKP 129
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
LIYCS+TGFG GPY RPGYD I +GG + +TG P G P K GIA DL TG
Sbjct: 130 DLIYCSITGFGQTGPYAQRPGYDFIIQGMGGFMSVTGERDALPGGGPQKAGIAITDLMTG 189
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA AV+AAL H+ +TG+GQ ID LL QV+M+ N+G NYL + +RWG +H N+V
Sbjct: 190 MYATVAVLAALSHRDRTGEGQAIDLALLDVQVAMMANMGTNYLASDNIPQRWGNAHPNIV 249
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
P+Q F T++G++ + G+D+QY++ + LA D R+ T L
Sbjct: 250 PYQTFATADGHLIVAAGNDRQYRNFVTAGDCAWLADDTRFATNPL 294
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 71/130 (54%)
Query: 10 LALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADE 69
LA D R+ T LRV+NR++L + +++ ++WL + + P +N++ +VF +
Sbjct: 283 LADDTRFATNPLRVQNRDVLVPLLAEMVIKRNKQDWLTLLEAAGVPCGPINNLEEVFENP 342
Query: 70 HIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETT 129
+ L ++ H +++G + S T P + PP LG+HTD VL LL Y E
Sbjct: 343 QVIARGLQIDLPHPAGASARLIGSPMRMSETPPAYGSAPPLLGQHTDEVLAGLLGYSEAE 402
Query: 130 IAKLKEKKIL 139
+A+L+ +++L
Sbjct: 403 LAQLRAREVL 412
>gi|146280838|ref|YP_001170991.1| putative lipid metabolism-related protein [Pseudomonas stutzeri
A1501]
gi|145569043|gb|ABP78149.1| putative lipid metabolism-related protein [Pseudomonas stutzeri
A1501]
Length = 407
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 139/294 (47%), Positives = 190/294 (64%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+C +L DLGAEVIKVE+P TGD+ R WGPP+L NT +
Sbjct: 5 LSHIRVLDLSRVLAGPWCGQILGDLGAEVIKVERPGTGDDTRHWGPPYLKDQHGENTSEA 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+S+ VDF PEGQ++I++L QCDVL+ENF G L L Y+ L IN
Sbjct: 65 AYYLTANRNKQSLTVDFTRPEGQRVIRELVAQCDVLLENFKVGGLAAYGLDYESLKAINP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG D P KVG+A D+ TG
Sbjct: 125 RLIYCSITGFGQDGPYATRAGYDFMIQGLGGLMSLTGRSDAEEGAGPVKVGVALTDILTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA V+AAL H+ ++G+GQ ID LL QV+ L N NYL G+ +R G +H N+V
Sbjct: 185 LYATVGVLAALAHRERSGEGQHIDTALLDVQVACLGNQALNYLTTGVAPRRMGNAHPNIV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + + G+D Q++ C+V A D R+ T +A + LI
Sbjct: 245 PYQDFPTADGDIILTVGNDGQFRKFCEVAGRPEWAADARFATNRARVAHRAELI 298
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 68/139 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V A D R+ T RV +R L I T+ +TT EW+ + P +N
Sbjct: 269 FCEVAGRPEWAADARFATNRARVAHRAELIPLIRQVTVFRTTAEWVSALEQAGVPCGPIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD +Q L ++ H G + V + S + R PPP LGEH++ +L+
Sbjct: 329 DLAQVFADPQVQHRGLNVDMPHPLAGRVPQVASPLRLSASPVAYRNPPPLLGEHSEALLQ 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
LL ++ IA L+ ++
Sbjct: 389 RLLGMNDEQIAGLRAAGVI 407
>gi|124265514|ref|YP_001019518.1| CaiB/BaiF family protein [Methylibium petroleiphilum PM1]
gi|124258289|gb|ABM93283.1| CaiB/BaiF family protein [Methylibium petroleiphilum PM1]
Length = 421
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 137/290 (47%), Positives = 192/290 (66%), Gaps = 13/290 (4%)
Query: 215 LPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TE 269
L L+ +R+LDL+R++AGP+CT LL DLGA+V+KVE+P +GD+ R WGPPFL++ +
Sbjct: 8 LSLAGLRVLDLSRVLAGPWCTQLLGDLGADVVKVERPGSGDDTRGWGPPFLHDRHGAESS 67
Query: 270 LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEI 329
S YF NRNK+S+ +D P+GQ +++ L Q DVLVEN+ G + R L + L +
Sbjct: 68 ESAYFLGANRNKRSIAIDLAHPDGQALVRALVLQADVLVENYKVGDMARYGLDFVTLHAL 127
Query: 330 NSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLA 385
N QL+YCS+TG+G GPY +R GYD +GGL+ +TG P G P KVG+A DL
Sbjct: 128 NPQLVYCSITGYGQTGPYHERAGYDYAVQGLGGLMSLTGERDDLPGGGPQKVGVAVADLF 187
Query: 386 TGLYAHGAVMAALLHK----YKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGT 441
TGLYA ++AAL H+ ++ G+GQ ID LL TQV+ML N+GANYL +G R G
Sbjct: 188 TGLYASVGILAALRHRDAEGFRRGEGQHIDMALLDTQVAMLANLGANYLVSGQVPGRAGN 247
Query: 442 SHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
+H N+VP+QVF+ ++G+V + G+D Q+ C+V LA DPR+ T A
Sbjct: 248 AHQNIVPYQVFEVADGHVILAIGNDAQFARFCEVAGRPELAADPRFATNA 297
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 70/140 (50%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V LA DPR+ T A RV +R L + A ++ ++WL + P +N
Sbjct: 278 FCEVAGRPELAADPRFATNADRVRHRAALVPVLAALMRQRRRDDWLAALEAAKLPCGPIN 337
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ QVFAD + +V+ + H +++V + S T + R PPP L +H D VL
Sbjct: 338 ALDQVFADPQVLARGMVEPVDHPLTDTLRLVASPLKLSATPAQTRRPPPLLDQHGDDVLV 397
Query: 121 DLLNYDETTIAKLKEKKILG 140
D L +D IA +E+ LG
Sbjct: 398 DWLGWDAAAIAAARERGALG 417
>gi|50551607|ref|XP_503278.1| YALI0D25542p [Yarrowia lipolytica]
gi|49649146|emb|CAG81482.1| YALI0D25542p [Yarrowia lipolytica CLIB122]
Length = 453
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 143/320 (44%), Positives = 198/320 (61%), Gaps = 22/320 (6%)
Query: 194 KISLYENFYSLDLALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVT 253
+ S +F S AL+S + SLPL+ VR++D++R++AGP+CT LLADLGA+VIK+E P
Sbjct: 9 QFSHIRSFSSTSRALNSGS-SLPLAGVRVVDMSRVLAGPYCTQLLADLGADVIKIEHPTR 67
Query: 254 GDECRKWGPPFLNNTEL--------------------STYFTCVNRNKKSVCVDFKTPEG 293
GD+ R WGPPF T+ S YF CVNRNKKSV + F++ EG
Sbjct: 68 GDDTRAWGPPFAPYTKTDDSLGVSRDMVEVAGTAPGESAYFLCVNRNKKSVGLSFQSDEG 127
Query: 294 QQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGY 353
+ +K L DV VEN+VPG L R L Y L + N +LIY S+TG+G GPY RPGY
Sbjct: 128 KAALKRLIASADVFVENYVPGTLKRYGLSYDDLKDANPKLIYTSITGYGQTGPYSHRPGY 187
Query: 354 DIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCN 413
D++ + GL+HITG PDG P KVG+A DL TGLYA +V+AAL+ + +GKG ID +
Sbjct: 188 DVMVEAEMGLMHITGEPDGAPSKVGVAVTDLTTGLYASNSVLAALIKRGVSGKGTHIDAS 247
Query: 414 LLSTQVSMLINVGANYLNAG-IEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDM 472
L QV+ L N+ + L +G + R GT+H ++ P+Q F T++G + IG G+D ++
Sbjct: 248 LADCQVASLANIASQVLISGKPDSGRQGTAHPSICPYQAFDTADGSIMIGGGNDNLFKLA 307
Query: 473 CKVMNLQHLALDPRYLTGAL 492
C + DPR+L+ AL
Sbjct: 308 CDALGKPEWKTDPRFLSNAL 327
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 80/140 (57%), Gaps = 3/140 (2%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C + DPR+L+ ALRV+NR++L I T K T +W+ IF+ +FP+A +N
Sbjct: 308 CDALGKPEWKTDPRFLSNALRVKNRDILVPAIHEVTKTKKTNDWVEIFKVFNFPFAAIND 367
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYS--LTQPEVRTPPPALGEHTDYVL 119
I ++EH+ +++ + H G +K+VG V +S +QP +R PPP LG+HT V
Sbjct: 368 IQTTLSNEHVVARDMIQTVDHPVCGPMKLVGVPVKFSDKTSQPNIRMPPPLLGQHTFEVF 427
Query: 120 KDLLNYDETTIAKLKEKKIL 139
++ + Y + I KL + ++
Sbjct: 428 RE-VGYSDAEINKLVQDGVI 446
>gi|444366510|ref|ZP_21166547.1| CoA-transferase family III protein [Burkholderia cenocepacia
K56-2Valvano]
gi|443604477|gb|ELT72407.1| CoA-transferase family III protein [Burkholderia cenocepacia
K56-2Valvano]
Length = 413
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 134/282 (47%), Positives = 186/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
LS++R+LDLTR++AGP+C LAD GA+VIKVE+P GD+ R WGPP+L + T +
Sbjct: 11 LSHIRVLDLTRVLAGPWCAQTLADFGADVIKVERPGAGDDTRHWGPPYLKDADGADTAEA 70
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +D TPEGQ+I+++LA Q DV++EN+ G+L + L + L +
Sbjct: 71 AYYLAANRNKRSVTIDIATPEGQRIVRELAAQSDVVLENYKVGQLKKYGLDHDALRAVKP 130
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHIT----GHPDGPPCKVGIASIDLATG 387
L+YCSVTGFG GPY R GYD I IGG + IT G P G P K G+A DLATG
Sbjct: 131 DLVYCSVTGFGQTGPYAHRAGYDFIVQGIGGFMSITGERDGEPGGGPQKAGVAIADLATG 190
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ AV+AAL H+ +TG+GQ ID LL QV++L N+ N+L +G RWG +H N+V
Sbjct: 191 LYSTIAVLAALAHRDRTGEGQYIDMALLDVQVALLANMNTNFLASGKPPVRWGNAHPNIV 250
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+TS+G++ + G+D Q++ + LA D R+ T
Sbjct: 251 PYQTFQTSDGWIIVAVGNDGQFRKFVEAGGRPELADDERFAT 292
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 65/131 (49%)
Query: 9 HLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFAD 68
LA D R+ T RV +R+ L + + +W+ + P +N + +VF +
Sbjct: 283 ELADDERFATNPSRVRHRDTLVPILAEMVKARGKADWIGALEAAGVPCGPINDLDEVFDN 342
Query: 69 EHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDET 128
E + + + H D+K+V + S T P+ RT PP LG T+ VL+D+L YD+
Sbjct: 343 EQVVARGMQVALPHPCGADVKLVRNPIRMSATPPDARTAPPLLGAQTEEVLRDMLGYDDE 402
Query: 129 TIAKLKEKKIL 139
IA LK K+ +
Sbjct: 403 RIAALKAKQAI 413
>gi|221633345|ref|YP_002522570.1| protein C7orf10 [Thermomicrobium roseum DSM 5159]
gi|221155375|gb|ACM04502.1| protein C7orf10 [Thermomicrobium roseum DSM 5159]
Length = 413
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 128/277 (46%), Positives = 186/277 (67%), Gaps = 2/277 (0%)
Query: 215 LPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYF 274
LPLS VR++DLTR++AGP+CTMLL DLGA+VIK+E+P TGD+ R WGPPF++ +S Y+
Sbjct: 21 LPLSGVRVVDLTRVMAGPYCTMLLGDLGADVIKIERPGTGDDTRAWGPPFIDG--VSAYY 78
Query: 275 TCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLI 334
VNRNK+S+ +D K P GQ++ L + DV+VENF PG +DRL +GY+ + Q+I
Sbjct: 79 LSVNRNKRSITLDLKHPAGQEVFWRLVDRADVVVENFSPGTVDRLGIGYQAVRGRRPQII 138
Query: 335 YCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAV 394
YCS++GFG GP KDR YD+I + GL+ +TG P+G P + G+ D+ G++A A+
Sbjct: 139 YCSISGFGQTGPGKDRTAYDLIVQGMSGLMSVTGFPEGEPVRFGVPIADIGAGMFAALAI 198
Query: 395 MAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKT 454
+AAL H+ +TG+GQ ID ++L QV++L Y G KR G +H V P+Q F++
Sbjct: 199 VAALYHRAQTGEGQYIDTSMLGGQVALLTYQAGIYFATGEAPKRTGNAHPIVAPYQTFRS 258
Query: 455 SNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
++G+V I G+D + MC+ + L L D R+ T A
Sbjct: 259 ADGHVNIAAGNDAIFTRMCRALGLDDLLEDERFATNA 295
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 67/136 (49%), Gaps = 1/136 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
MC+ + L L D R+ T A R+ N L + IE+ T TT E + P +
Sbjct: 276 MCRALGLDDLLEDERFATNAGRITNLPELVERIESVTSTLTTAEIVHRLDAAQVPCGPIY 335
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ +VFAD +Q ++L + I H G + G +S T +R PP LGEHT+ VL
Sbjct: 336 TVPEVFADPQVQHLELHQRIPHPTLGMVDQTGFPWRFSQTPARIRRYPPLLGEHTEEVLG 395
Query: 121 DLLNYDETTIAKLKEK 136
+ L Y I ++++
Sbjct: 396 E-LGYTSDEITAMRQQ 410
>gi|167031197|ref|YP_001666428.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
putida GB-1]
gi|166857685|gb|ABY96092.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
putida GB-1]
Length = 406
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 193/294 (65%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGA+VIKVE+P +GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWSGQILADLGADVIKVERPGSGDDTRSWGPPFLKDVEGENTGEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++++LA +CD+++ENF G L L Y+ L +N
Sbjct: 64 AYYLSANRNKRSVTIDFTQPEGQRLVRELAAKCDIVIENFKVGGLAAYGLDYQSLKAVNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
QLIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 QLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPEGEAGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ +TG GQ +D LL QV+ L N NYL G +R G +H N+V
Sbjct: 184 LYSTVAMLAALAHRDQTGVGQHVDMALLDVQVACLANQAMNYLTTGTSPRRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR++T L +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDSQFRKFAEVAGQPQWADDPRFVTNKLRVANRAELI 297
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 66/139 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR++T LRV NR L I T+ KTT EW+ + P +N
Sbjct: 268 FAEVAGQPQWADDPRFVTNKLRVANRAELIPLIRQATVFKTTAEWVRQLEAAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++Q+F D + L ++H G + V + S T E R PP LGEHTD VL
Sbjct: 328 DLAQMFQDPQVLARGLAVSMAHPLAGSVPQVASPIRLSETPVEYRRAPPLLGEHTDVVLG 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
++L + +L+ +L
Sbjct: 388 EVLGLGAGELQRLRGAGVL 406
>gi|440743646|ref|ZP_20922955.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
syringae BRIP39023]
gi|440375411|gb|ELQ12121.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
syringae BRIP39023]
Length = 406
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 138/294 (46%), Positives = 193/294 (65%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
LS++R+LDL+R++AGP+ +LADLGA+VIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHIRVLDLSRVLAGPWAGQILADLGADVIKVERPGGGDDTRSWGPPFLQDAAGQNTTEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++++LA + D+++ENF L L Y+ L +N
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQRLVRELAAKSDIVIENFKVDGLAAYGLDYESLKAVNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY RPGYD + ++GGL+ +TG PDG P KVG+A D+ TG
Sbjct: 124 RLIYCSITGFGQSGPYARRPGYDFMIQALGGLMSLTGLPDGEEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ ++ GQ ID LL QV+ L N G NYL GI KR G +H N+V
Sbjct: 184 LYSTTAILAALAHRDQSDIGQYIDMALLDVQVACLANQGMNYLTTGIAPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + + G+D Q++ V A DPR+LT L +A + LI
Sbjct: 244 PYQDFPTADGDLILTVGNDSQFRKFAAVAGQPQWAEDPRFLTNKLRVAHRAELI 297
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 65/139 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
V A DPR+LT LRV +R L I T+ K T +W+ + P VN
Sbjct: 268 FAAVAGQPQWAEDPRFLTNKLRVAHRAELIPLIRQVTVFKATAQWVSELEAAGVPCGPVN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD H+ L E+ H G + V + S T E PP LGEHT VL+
Sbjct: 328 DLAQVFADPHVVARGLAIELPHVLAGRVPQVASPIRLSETPVEYTRAPPLLGEHTAQVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
LL E I L+E +L
Sbjct: 388 ALLGIGEEEITVLREAGVL 406
>gi|422320681|ref|ZP_16401737.1| acyl-CoA transferase/carnitine dehydratase [Achromobacter
xylosoxidans C54]
gi|317404527|gb|EFV84935.1| acyl-CoA transferase/carnitine dehydratase [Achromobacter
xylosoxidans C54]
Length = 409
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 135/289 (46%), Positives = 190/289 (65%), Gaps = 10/289 (3%)
Query: 210 SENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL---- 265
S+ P+ PL+ +R+LDLTR++AGP+CT LADLGAEVIK+E+P GD+ R WGPP+L
Sbjct: 2 SQRPA-PLTGIRVLDLTRVLAGPWCTQNLADLGAEVIKIERPGAGDDTRAWGPPYLKDAA 60
Query: 266 -NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYK 324
N+T + Y+ NRNK SV +D +P G +++++LA Q D+LVENF G L + L Y
Sbjct: 61 GNDTTEAAYYLSANRNKFSVALDIASPRGAELVRELALQSDILVENFKVGGLAKYGLDYA 120
Query: 325 HLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIA 380
L E N +LIYCS+TGFG GPY RPGYD + +GGL+ ITG P G P K G+A
Sbjct: 121 SLKEANPRLIYCSITGFGQTGPYASRPGYDFMIQGMGGLMSITGERDDLPGGGPQKAGVA 180
Query: 381 SIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWG 440
DL TG+Y+ ++AAL + +G GQ ID LL QV+ML N N++ +G +R G
Sbjct: 181 VADLMTGMYSTVGILAALHERSVSGLGQHIDMALLDCQVAMLANQNLNFMTSGNAPRRAG 240
Query: 441 TSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+H N+VP+QVF S+G++ + G+D Q+++ C + L L+ DPR+ T
Sbjct: 241 NAHQNLVPYQVFAASDGHLIVAVGNDSQFRNYCGAIGLPELSADPRFST 289
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C + L L+ DPR+ T RV+NRE L + + + WL + V P +N+
Sbjct: 273 CGAIGLPELSADPRFSTNPQRVKNREALVPLLAERMATGARDHWLASLEAVGVPAGPINT 332
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
+ QV+ D + + +E+ H G + + + +S + E R PP LGEHT VL +
Sbjct: 333 LDQVYEDPQVLARGMKRELPHPTAGTVPMAASPLKFSGSPVEYRRAPPMLGEHTAQVLSE 392
Query: 122 LLNYDETTIAKLKEK 136
L + I L +
Sbjct: 393 KLGLSDAEIQALAQS 407
>gi|421485405|ref|ZP_15932964.1| CoA-transferase [Achromobacter piechaudii HLE]
gi|400196324|gb|EJO29301.1| CoA-transferase [Achromobacter piechaudii HLE]
Length = 410
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 189/294 (64%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L +R+LDL+RI+AGP+CT LADLGA+VIK+E+P GD+ R WGPP+L +T S
Sbjct: 7 LDGIRVLDLSRILAGPWCTQNLADLGADVIKIERPHVGDDTRAWGPPYLKDGDGRDTSES 66
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV D TPEG +I++LA D+LVENF G L + L Y L IN
Sbjct: 67 AYYLSANRNKRSVEADMATPEGAALIRELAAASDILVENFKVGGLAKYGLDYDSLKAINP 126
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+LIYCSVTGFG GP+ RPGYD + +GGL+ ITG P G P K G+A D+ TG
Sbjct: 127 RLIYCSVTGFGQDGPFAPRPGYDFMIQGMGGLMSITGERDDLPGGGPQKAGVAVTDIVTG 186
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA A++AAL ++++G GQ +D LL + V++L N +NY N+G+ R G +H NVV
Sbjct: 187 MYATVAILAALQERHRSGLGQHLDIALLDSHVALLANQNSNYFNSGVAPTRAGNAHQNVV 246
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+QVF S+G++ + TG++ QY+ C+ + L DPR+ T L + LI
Sbjct: 247 PYQVFAASDGHLIVATGNESQYRAYCRAIGAPELGDDPRFATNRLRVTNRETLI 300
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 67/134 (50%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C+ + L DPR+ T LRV NRE L + A +E ++W+ + V P +N+
Sbjct: 272 CRAIGAPELGDDPRFATNRLRVTNRETLIGILTAIMLEGRRDDWIAKLEAVGVPCGPINN 331
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
I+Q FA Q +L +++ H G + + +S + R PP LGEHT+ VL+D
Sbjct: 332 IAQAFAHPQAQARQLRRDLPHPAGGTAPVTASPLRFSASPVVYRRAPPMLGEHTEEVLRD 391
Query: 122 LLNYDETTIAKLKE 135
+L IA K+
Sbjct: 392 VLGKSADAIAAFKK 405
>gi|396490253|ref|XP_003843292.1| similar to caib/baif family protein [Leptosphaeria maculans JN3]
gi|312219871|emb|CBX99813.1| similar to caib/baif family protein [Leptosphaeria maculans JN3]
Length = 448
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 134/293 (45%), Positives = 195/293 (66%), Gaps = 7/293 (2%)
Query: 207 ALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN 266
A S + +LPL +++LD+TR++AGP+CT +L DLGA+VIKVE PV GD+ R WGPP+
Sbjct: 37 AASGDASNLPLDGIKVLDMTRVLAGPYCTQILGDLGADVIKVEHPVRGDDTRAWGPPYAK 96
Query: 267 NTEL------STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLN 320
T S Y+ VNRNK+S+ + F+ P G I+ L K+CDVLVEN++PG L +
Sbjct: 97 YTNRQQGPGESAYYLGVNRNKRSLGLSFQHPAGVDILHRLVKECDVLVENYLPGSLGKYA 156
Query: 321 LGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIA 380
+ Y +S+IN ++Y S+TG+G GPY++R GYD++ + GL+HITG DGPP KVG+A
Sbjct: 157 MDYATVSKINPSIVYASITGYGQTGPYRNRAGYDVMVEAEMGLMHITGTRDGPPVKVGVA 216
Query: 381 SIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAG-IEGKRW 439
DL TGLY +V+AAL + +TG+GQ ID L QV+ L N+ ++ L +G + RW
Sbjct: 217 VTDLTTGLYTSNSVIAALFRRMRTGRGQHIDVALSDCQVATLANIASSCLISGQRDSGRW 276
Query: 440 GTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
GTSH ++VP++ FKTS+G + +G G+D+ + +C + A D R+ T AL
Sbjct: 277 GTSHPSIVPYKAFKTSDGDILLGGGNDRLFGIICSKLGKPEWATDERFKTNAL 329
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 81/139 (58%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + A D R+ T ALRV+NR+ L + IE +T +KTT+E L I +G PYA +N
Sbjct: 309 ICSKLGKPEWATDERFKTNALRVQNRDTLEELIENETRQKTTQELLGILEGSGMPYAAIN 368
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ EH+ +VKEI H G IK+V V +S + P +R+ PP LG+HTD VL+
Sbjct: 369 DVQDTLNHEHVLARDMVKEIDHPACGPIKLVNTPVKWSESTPGIRSAPPTLGQHTDEVLE 428
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L + + +L+ + ++
Sbjct: 429 GMLKMSKAEVDELRGEGVV 447
>gi|149374915|ref|ZP_01892688.1| L-carnitine dehydratase/bile acid-inducible protein F [Marinobacter
algicola DG893]
gi|149360804|gb|EDM49255.1| L-carnitine dehydratase/bile acid-inducible protein F [Marinobacter
algicola DG893]
Length = 407
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 138/293 (47%), Positives = 191/293 (65%), Gaps = 8/293 (2%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL----NNTELST 272
LS++R+LDL+R++AGP+ +L DLGAEVIK+E+P +GD+ R WGPP+L N +LS
Sbjct: 5 LSHLRVLDLSRVLAGPWAGQILGDLGAEVIKIERPKSGDDTRSWGPPYLQGADGNADLSA 64
Query: 273 YFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQ 332
YF NRNK+S+ VD PEGQ++I+ L + DV++ENF G L R L Y+ L IN +
Sbjct: 65 YFLTANRNKQSLAVDIAHPEGQELIRKLVAESDVILENFKVGGLKRYGLDYESLKRINPK 124
Query: 333 LIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATGL 388
LIYCS+TGFG GPY +RPGYD + ++GGL+ ITG PDG P KVG+A D+ TGL
Sbjct: 125 LIYCSITGFGQDGPYANRPGYDFLIQAMGGLMSITGQPDGEPGAGPMKVGVALTDIMTGL 184
Query: 389 YAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVP 448
YA V+AAL H+ +TG+GQ ++ LL QV+ L N NYL G R G +H N+VP
Sbjct: 185 YATIGVLAALSHRDRTGEGQYVEAALLDVQVACLANQAMNYLTTGQAPGRMGNAHPNIVP 244
Query: 449 HQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
+Q F T++G + + G+D+Q+ +C V+ A D R+ T +A LI
Sbjct: 245 YQDFPTADGNMVLTVGNDEQFARLCDVLGHPEWASDERFATNRARVANRKELI 297
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C V+ A D R+ T RV NR+ L + T+ ++T+EW+ + + P VN
Sbjct: 268 LCDVLGHPEWASDERFATNRARVANRKELIPRLRQATVMRSTQEWVQVLERSGVPCGPVN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ QVF D + + + + H GD+ VG + LT RT PP LGE + VL+
Sbjct: 328 TLDQVFEDPQVLARGMKQSVQHPLLGDVPTVGNPIRLKLTPVSYRTAPPLLGEQSKQVLE 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ IA L+E+ ++
Sbjct: 388 RVAGLSPGEIASLRERGVI 406
>gi|410090509|ref|ZP_11287102.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
viridiflava UASWS0038]
gi|409762125|gb|EKN47152.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
viridiflava UASWS0038]
Length = 406
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 190/294 (64%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGA+VIKVE+PV GD+ R WGPPFL NT +
Sbjct: 4 LSHIRVLDLSRVLAGPWAGQILADLGADVIKVERPVCGDDTRSWGPPFLKDETGQNTTEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++++L + D+++ENF L L Y L +N
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQRLVRELVAKSDIVIENFKVDGLAAYGLDYASLKAVNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG PDG P KVG+A D+ TG
Sbjct: 124 KLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPDGDEGGGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ ++G GQ ID LL QV+ L N NYL G+ KR G +H N+V
Sbjct: 184 LYSTTAILAALAHRDQSGVGQYIDMALLDVQVACLANQAMNYLTTGVAPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+LT L +A S LI
Sbjct: 244 PYQDFPTADGDFILTVGNDSQFRKFAEVAGQSQWATDPRFLTNKLRVANRSELI 297
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 66/139 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+LT LRV NR L I T+ KTT +W+ + P VN
Sbjct: 268 FAEVAGQSQWATDPRFLTNKLRVANRSELIPLIRQATVFKTTAQWVDELEAAGVPCGPVN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVF D + L E+ H G + V + S T E R PP LGEHT VL+
Sbjct: 328 DLAQVFDDPQVLARGLAIELPHALGGRVAQVASPIRLSETPVEYRRAPPLLGEHTAQVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
LL +A LKE +L
Sbjct: 388 TLLGMSGDEVAALKEAGVL 406
>gi|91786192|ref|YP_547144.1| L-carnitine dehydratase/bile acid-inducible protein F [Polaromonas
sp. JS666]
gi|91695417|gb|ABE42246.1| L-carnitine dehydratase/bile acid-inducible protein F [Polaromonas
sp. JS666]
Length = 424
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 140/285 (49%), Positives = 184/285 (64%), Gaps = 14/285 (4%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
L +RILDL+R++AGP+CT LADLGA+VIK+E+P TGD+ R WGPPFL + T+ +
Sbjct: 17 LDGIRILDLSRVLAGPWCTQTLADLGADVIKIERPGTGDDTRTWGPPFLKDDQGTETQEA 76
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV D P GQ +I++LA CDV VENF G + R L Y L IN
Sbjct: 77 AYYLGTNRNKRSVTCDIARPAGQALIRELAAHCDVFVENFKVGDMARYGLDYASLKAINP 136
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD---GPPCKVGIASIDLATGL 388
+L+YCSVTGFG GPY +R GYD +GGL+ +TG D G P KVG+A DL TG+
Sbjct: 137 RLVYCSVTGFGQTGPYAERAGYDYAIQGMGGLMSVTGERDDIGGGPQKVGVAVADLMTGM 196
Query: 389 YAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVP 448
YA A++AAL H +TG+GQ++D LL TQV+ML N+ ANYL +G R G +H N+VP
Sbjct: 197 YATVAILAALRHAERTGEGQQVDMALLDTQVAMLANLSANYLVSGKAPGRAGNAHQNIVP 256
Query: 449 HQVFKTSNG------YVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
+QVF+ + ++ + G+D QY C V LA DPRY
Sbjct: 257 YQVFEVAPAADGHKDHLILAVGNDGQYAKFCAVAGHPELASDPRY 301
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 73/139 (52%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C V LA DPRY RV NR +L +EA +T +WL + P +N
Sbjct: 286 FCAVAGHPELASDPRYAKNQDRVRNRAVLVPLLEAILKTRTKADWLAALEAAKVPCGAIN 345
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++++VFAD I+ ++V H D+++V + S T PPP LG+HT+ VL+
Sbjct: 346 NLAEVFADPQIEARQMVTHWQHPVKQDLRLVSSPIKLSATPVRCDLPPPLLGQHTEDVLR 405
Query: 121 DLLNYDETTIAKLKEKKIL 139
+LNY + ++ LK K+++
Sbjct: 406 GMLNYSDAQLSDLKNKQVI 424
>gi|171057534|ref|YP_001789883.1| L-carnitine dehydratase/bile acid-inducible protein F [Leptothrix
cholodnii SP-6]
gi|170774979|gb|ACB33118.1| L-carnitine dehydratase/bile acid-inducible protein F [Leptothrix
cholodnii SP-6]
Length = 415
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 135/289 (46%), Positives = 185/289 (64%), Gaps = 9/289 (3%)
Query: 210 SENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL---- 265
+ P L +RILDLTR++AGP+CT LADLGA+VIK+E+P GD+ R WGPP+
Sbjct: 6 ASTPGGALGGLRILDLTRVLAGPWCTQTLADLGADVIKIERPGAGDDTRHWGPPYAKDEA 65
Query: 266 -NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYK 324
++T + YF VNRNK+SV +D + GQ +I+ L QCDVLVEN+ G + R L Y
Sbjct: 66 GHDTHEAAYFLAVNRNKRSVTLDIASEAGQALIRRLVPQCDVLVENYKVGDMARYGLDYD 125
Query: 325 HLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIA 380
LS ++ L+YCS+TGFG GPY RPGYD I +GG + +TG P G P K G+A
Sbjct: 126 SLSALHPGLVYCSITGFGQTGPYAPRPGYDFIVQGMGGFMSVTGERDGAPGGGPQKAGVA 185
Query: 381 SIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWG 440
DLATG +A A++AAL H+ +TG+GQ +D LL QVS++ N+ +NYL RWG
Sbjct: 186 IADLATGAHAVIAILAALRHRDRTGEGQYLDIGLLDVQVSLMANMASNYLATDRAPVRWG 245
Query: 441 TSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+H N+VP+QVFK ++G+V + G+D Q+ + LA DPR+ T
Sbjct: 246 NAHPNIVPYQVFKVADGWVIVACGNDHQFGKLVDAGQRPELATDPRFAT 294
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 66/130 (50%)
Query: 10 LALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADE 69
LA DPR+ T RV +RE L +E + ++ + W+ + V P +N ++ VFAD
Sbjct: 286 LATDPRFATNPARVRHREQLVALLEPMMLTRSRDAWIATLEEVGVPCGPINDLADVFADP 345
Query: 70 HIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETT 129
+ ++ ++ H G + + A+ S T R PP LGEHT VLK+L + +
Sbjct: 346 QVIARQMRLDMPHPTAGQVSVPASALKLSATPVSYRRAPPLLGEHTAEVLKELASQTDAD 405
Query: 130 IAKLKEKKIL 139
+ LK + I+
Sbjct: 406 LDGLKARSII 415
>gi|320589305|gb|EFX01767.1| caib baif family enzyme [Grosmannia clavigera kw1407]
Length = 659
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 136/296 (45%), Positives = 195/296 (65%), Gaps = 9/296 (3%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE---- 269
+LPL R+LD+TR++AGP+CT +L DLGAEVIK+E PV GD+ R WGPP+ T
Sbjct: 53 TLPLEGYRVLDMTRVLAGPYCTQILGDLGAEVIKIEHPVRGDDTRAWGPPYATYTAKSGR 112
Query: 270 ----LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKH 325
S YF VNRNKKS+ + F+ PEG +I++ LA +CD+LVEN++PG L + L ++
Sbjct: 113 DGPGESAYFLGVNRNKKSLGLSFQHPEGVEILQKLAAKCDILVENYLPGTLKKYGLDFET 172
Query: 326 LSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLA 385
+ +IN LIY S+TG+G GPY R GYD++ + GL+HITG DGPP KVG+A DL
Sbjct: 173 IHKINPGLIYASITGYGQTGPYSPRAGYDVMVEAEFGLMHITGSRDGPPVKVGVAVTDLT 232
Query: 386 TGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAG-IEGKRWGTSHA 444
TGLY ++MAA+L + KTG+GQ ID L Q + L N+ ++ L +G + RWGT+H
Sbjct: 233 TGLYTSNSIMAAILTRAKTGRGQHIDSALSDCQTATLANIASSCLISGQPDTGRWGTAHP 292
Query: 445 NVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHL 500
++VP++ FKT +G V G G+D+ Y +C+ + DP+++T A +A + L
Sbjct: 293 SIVPYRSFKTKDGDVLFGGGNDRLYGILCQGIQRPEWIADPKFVTNAQRVAHRTEL 348
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 70/116 (60%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + DP+++T A RV +R L ++IE T+ KTT+EWL IF+G PYA VN
Sbjct: 320 LCQGIQRPEWIADPKFVTNAQRVAHRTELEQKIEEITVTKTTQEWLEIFEGRGMPYAAVN 379
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTD 116
+ EH + +V E+ HE+ G IK+V + S T P +R+PPP LG+HT+
Sbjct: 380 DVKTALNHEHTKARNMVVEVEHEQCGPIKLVNTPIKLSETPPTIRSPPPLLGQHTE 435
>gi|206559782|ref|YP_002230546.1| putative lipid metabolism-related protein [Burkholderia cenocepacia
J2315]
gi|444363875|ref|ZP_21164249.1| CoA-transferase family III protein [Burkholderia cenocepacia BC7]
gi|198035823|emb|CAR51714.1| putative lipid metabolism-related protein [Burkholderia cenocepacia
J2315]
gi|443594103|gb|ELT62780.1| CoA-transferase family III protein [Burkholderia cenocepacia BC7]
Length = 406
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 134/282 (47%), Positives = 186/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
LS++R+LDLTR++AGP+C LAD GA+VIKVE+P GD+ R WGPP+L + T +
Sbjct: 4 LSHIRVLDLTRVLAGPWCAQTLADFGADVIKVERPGAGDDTRHWGPPYLKDADGADTAEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +D TPEGQ+I+++LA Q DV++EN+ G+L + L + L +
Sbjct: 64 AYYLAANRNKRSVTIDIATPEGQRIVRELAAQSDVVLENYKVGQLKKYGLDHDALRAVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHIT----GHPDGPPCKVGIASIDLATG 387
L+YCSVTGFG GPY R GYD I IGG + IT G P G P K G+A DLATG
Sbjct: 124 DLVYCSVTGFGQTGPYAHRAGYDFIVQGIGGFMSITGERDGEPGGGPQKAGVAIADLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ AV+AAL H+ +TG+GQ ID LL QV++L N+ N+L +G RWG +H N+V
Sbjct: 184 LYSTIAVLAALAHRDRTGEGQYIDMALLDVQVALLANMNTNFLASGKPPVRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+TS+G++ + G+D Q++ + LA D R+ T
Sbjct: 244 PYQTFQTSDGWIIVAVGNDGQFRKFVEAGGRPELADDERFAT 285
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 65/131 (49%)
Query: 9 HLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFAD 68
LA D R+ T RV +R+ L + + +W+ + P +N + +VF +
Sbjct: 276 ELADDERFATNPSRVRHRDTLVPILAEMVKARGKADWIGALEAAGVPCGPINDLDEVFDN 335
Query: 69 EHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDET 128
E + + + H D+K+V + S T P+ RT PP LG T+ VL+D+L YD+
Sbjct: 336 EQVVARGMQVALPHPCGADVKLVRNPIRMSATPPDARTAPPLLGAQTEEVLRDMLGYDDE 395
Query: 129 TIAKLKEKKIL 139
IA LK K+ +
Sbjct: 396 RIAALKAKQAI 406
>gi|422592174|ref|ZP_16666799.1| CAIB/BAIF family protein [Pseudomonas syringae pv. morsprunorum
str. M302280]
gi|330880074|gb|EGH14223.1| CAIB/BAIF family protein [Pseudomonas syringae pv. morsprunorum
str. M302280]
Length = 406
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 193/294 (65%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGA+VIKVE+P GD+ R WGPPFL +NT +
Sbjct: 4 LSHIRVLDLSRVLAGPWAGQILADLGADVIKVERPGCGDDTRAWGPPFLKDAAGHNTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++K LA + D+++ENF G L L Y L IN
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQKLVKQLAAKSDIVIENFKVGGLAAYGLDYASLKAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY RPGYD + ++GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 RLIYCSITGFGQSGPYATRPGYDFMIQALGGLMSLTGLPEGEEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ ++ GQ ID LL QV+ L N NYL G+ +R G +H N+V
Sbjct: 184 LYSTTAILAALAHRDQSDVGQHIDMALLDVQVACLANQAMNYLTTGVAPERLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + + G+D Q++ +V A DPR+LT L +A + LI
Sbjct: 244 PYQSFPTADGDLILTVGNDSQFRKFAEVAGQSQWADDPRFLTNTLRVAHRAELI 297
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 69/139 (49%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+LT LRV +R L I T+ K T +W++ + V P A VN
Sbjct: 268 FAEVAGQSQWADDPRFLTNTLRVAHRAELIPLIRQVTVFKATAQWVVELEAVGVPCAPVN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD H+ L E+ H G + V + S T E R PP LGEHT VL+
Sbjct: 328 DLAQVFADPHVVARGLAIELPHALGGKVPQVASPIRLSETPVEYRRAPPMLGEHTAQVLE 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ L +A L+ +L
Sbjct: 388 ERLGLGSDEVASLRAAGVL 406
>gi|398383523|ref|ZP_10541591.1| putative acyl-CoA transferase/carnitine dehydratase [Sphingobium
sp. AP49]
gi|397724539|gb|EJK85004.1| putative acyl-CoA transferase/carnitine dehydratase [Sphingobium
sp. AP49]
Length = 417
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 130/281 (46%), Positives = 183/281 (65%), Gaps = 6/281 (2%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE------L 270
L +++LDL+R++AGP+ T +LAD GA+VIK+E P GD+ R WGPPFL +
Sbjct: 6 LEGIKVLDLSRVLAGPWSTQILADFGADVIKIELPGHGDDTRAWGPPFLTGADGKPEIGT 65
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
S Y+ NRNK+S ++ TP+G ++I+ LA + D+LVENF G L + L Y L IN
Sbjct: 66 SAYYLSCNRNKRSAAINLATPQGAELIRRLAAEADILVENFKVGGLSKYGLDYASLKAIN 125
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYA 390
S+LIYCS+TGFG GPY DR GYD +A +GG + ITG DG P + G+A DL+TG++A
Sbjct: 126 SRLIYCSITGFGQTGPYADRGGYDFVAQGMGGFMSITGEEDGGPLRAGVAMADLSTGMFA 185
Query: 391 HGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQ 450
+++AAL H +TG+GQ+ID +LL TQ++ML N G N+L GI R G H VVP++
Sbjct: 186 TVSILAALRHAERTGEGQQIDVSLLDTQIAMLANQGMNWLVGGIVPGRLGNRHPTVVPYK 245
Query: 451 VFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
F+ ++G + I G+D+Q++ C M L DP Y T A
Sbjct: 246 TFEVADGMMIIAIGNDRQFRAFCTEMGHAELGTDPLYATSA 286
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 61/137 (44%), Gaps = 7/137 (5%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C M L DP Y T A R+ NR+ + +++ ++ + F P VN
Sbjct: 267 FCTEMGHAELGTDPLYATSAQRLINRDAIEAKVQEIVRPFARDDLMARFVAAGVPAGPVN 326
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAY----SLTQPEVRTPPPALGEHTD 116
SI VF D I + V E+ G ++I P VAY S T + R PP +GEH+
Sbjct: 327 SIQDVFEDPFIDARQTVHRYRREEDG-VEI--PTVAYPGKLSATPADYRHCPPRVGEHSR 383
Query: 117 YVLKDLLNYDETTIAKL 133
+L + L D+ + L
Sbjct: 384 EILGEWLGLDDGALDAL 400
>gi|320038653|gb|EFW20588.1| CAIB/BAIF family enzyme [Coccidioides posadasii str. Silveira]
Length = 444
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 140/309 (45%), Positives = 200/309 (64%), Gaps = 13/309 (4%)
Query: 197 LYENFYSLDLALSSENP-----SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQP 251
++ + SL L S P +LPL+ +R++D+TR++AGP+CT +L DLGAEVIK+E P
Sbjct: 18 VWNDGVSLVLRRSYSTPVHSADTLPLAGIRVVDMTRVLAGPYCTQILGDLGAEVIKIEHP 77
Query: 252 VTGDECRKWGPPFLNNTE-------LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQC 304
V GD+ R WGPPF E S Y+ VNRNKKS+ + F +G +I+ L K
Sbjct: 78 VRGDDTRAWGPPFAKYKEGTKDGPGESAYYLAVNRNKKSLGLSFAHKQGTEILHKLIKDA 137
Query: 305 DVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLL 364
DVLVEN++PG L + L Y+ LS +N +LIY S+TG+G GPY +R GYD++ + GL+
Sbjct: 138 DVLVENYIPGSLKKYKLDYETLSALNPRLIYASITGYGQTGPYSNRAGYDVMVEAEMGLM 197
Query: 365 HITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLIN 424
HITG DGPP KVG+A DL TGLY A+MAALL + KTG+GQ ID L QV+ L N
Sbjct: 198 HITGERDGPPVKVGVAVTDLTTGLYTSNAIMAALLARMKTGRGQHIDSALSDCQVATLSN 257
Query: 425 VGANYLNAGI-EGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLAL 483
+ ++ L +G + RWGT+H ++VP++ +KT +G + +G G+DK + +C+ + A
Sbjct: 258 LASSALISGQKDSGRWGTAHPSIVPYRGYKTKDGDILLGGGNDKLFGILCERLGHPEWAT 317
Query: 484 DPRYLTGAL 492
D R++T L
Sbjct: 318 DSRFVTNGL 326
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 81/139 (58%), Gaps = 1/139 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + A D R++T LRV+NRE + + IE +KTT+EWL IF+G PY+ VN
Sbjct: 306 LCERLGHPEWATDSRFVTNGLRVKNREAIDRLIEEIVKQKTTQEWLEIFEGSGMPYSAVN 365
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I H++ +V+E+ H G +K+V V YS P +RTPPP LG+HTD VL+
Sbjct: 366 DIQGTLNHAHVRARGMVQEVEHPICGPMKLVNTPVKYSHATPGIRTPPPTLGQHTDEVLQ 425
Query: 121 DLLNYDETTIAKLKEKKIL 139
D L + I +L+ ++
Sbjct: 426 D-LGFSTDNIDQLRRDGVV 443
>gi|422300788|ref|ZP_16388295.1| CAIB/BAIF family protein [Pseudomonas avellanae BPIC 631]
gi|407986932|gb|EKG29850.1| CAIB/BAIF family protein [Pseudomonas avellanae BPIC 631]
Length = 406
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 193/294 (65%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGA+VIKVE+P GD+ R WGPPFL +NT +
Sbjct: 4 LSHIRVLDLSRVLAGPWAGQILADLGADVIKVERPGCGDDTRAWGPPFLKDAAGHNTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++K+LA + D+++ENF G L L Y L IN
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQKLVKELAAKSDIVIENFKVGGLAAYGLDYASLKAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY RPGYD + ++GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 RLIYCSITGFGQSGPYATRPGYDFMIQALGGLMSLTGLPEGEEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ + GQ ID LL QV+ L N NYL G+ +R G +H N+V
Sbjct: 184 LYSTTAILAALAHRDQNNVGQHIDMALLDVQVACLANQAMNYLTTGVAPERLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + + G+D Q++ +V A DPR+LT L +A + LI
Sbjct: 244 PYQSFPTADGDLILTVGNDSQFRKFAEVAGQSQWADDPRFLTNTLRVAHRAELI 297
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 69/139 (49%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+LT LRV +R L I T+ K T +W++ + V P A VN
Sbjct: 268 FAEVAGQSQWADDPRFLTNTLRVAHRAELIPLIRQVTVFKATAQWVVELEAVGVPCAPVN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD H+ L E+ H G + V + S T E R PP LGEHT VL+
Sbjct: 328 DLAQVFADPHVVARGLAIELPHALGGKVPQVASPIRLSETPVEYRRAPPMLGEHTAVVLE 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
LL +A L+ +L
Sbjct: 388 ALLGLGGDEVASLRAAGVL 406
>gi|163857604|ref|YP_001631902.1| acyl-CoA transferase [Bordetella petrii DSM 12804]
gi|163261332|emb|CAP43634.1| Probable acyl-CoA transferase/carnitine dehydratase [Bordetella
petrii]
Length = 404
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 135/279 (48%), Positives = 185/279 (66%), Gaps = 3/279 (1%)
Query: 211 ENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL 270
NP LPL+ VR+LDL+R++AGP+CT LADLGA+V K+E P GD+ R W PP +
Sbjct: 7 SNP-LPLAGVRVLDLSRVLAGPWCTQTLADLGADVWKIEAPGRGDDTRSWTPPDVGGE-- 63
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
STYF C NR+K+S+ VD + PEG+ +++ LA Q DVLVEN+ G L + L Y LS +
Sbjct: 64 STYFMCANRSKRSLAVDLRHPEGRALVQRLAAQADVLVENYRLGALAKFGLDYDTLSRAH 123
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYA 390
+LIYCS++G+G GP PGYD + + GL+ ITG PDG P K+G+A DL TG+ A
Sbjct: 124 PRLIYCSISGYGRTGPRAAEPGYDFVIQAESGLMSITGEPDGAPMKLGVAITDLVTGMNA 183
Query: 391 HGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQ 450
A++AALL ++++GKGQ ID LL + VS+L NVGA YL AG +R+G H VVP+Q
Sbjct: 184 TQAILAALLARHQSGKGQLIDLALLDSAVSVLANVGAGYLAAGHAPQRFGNGHPTVVPYQ 243
Query: 451 VFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+F T++G +G G+D Q+ +C + A D RY T
Sbjct: 244 IFATADGAFALGVGNDTQFAALCAALGQPQWAQDERYRT 282
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 55/135 (40%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + A D RY T R NR L E+ + +++ WL + P V
Sbjct: 265 LCAALGQPQWAQDERYRTNRARALNRATLVPELRRILLTQSSAYWLARIRAAGIPAGPVR 324
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q I L+ + + +G ++++ + T P PP LGEHTD VL
Sbjct: 325 TVPQALDAPEIAARGLLADTADAVHGSLRLMRSPLHLRGTPPREPAAPPRLGEHTDEVLA 384
Query: 121 DLLNYDETTIAKLKE 135
+L I ++
Sbjct: 385 QVLGASAADIQGWRD 399
>gi|319760933|ref|YP_004124870.1| l-carnitine dehydratase/bile acid-inducible protein f
[Alicycliphilus denitrificans BC]
gi|330822837|ref|YP_004386140.1| formyl-CoA transferase [Alicycliphilus denitrificans K601]
gi|317115494|gb|ADU97982.1| L-carnitine dehydratase/bile acid-inducible protein F
[Alicycliphilus denitrificans BC]
gi|329308209|gb|AEB82624.1| Formyl-CoA transferase [Alicycliphilus denitrificans K601]
Length = 425
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 142/292 (48%), Positives = 193/292 (66%), Gaps = 10/292 (3%)
Query: 209 SSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNT 268
SS + LS++R+LDL+R++AGP+CT LAD+GA+VIK+E+P GD+ R WGPPF +
Sbjct: 7 SSSAATGALSHLRVLDLSRVLAGPWCTQNLADMGADVIKIEKPGDGDDTRHWGPPFFPDA 66
Query: 269 E-----LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGY 323
E + YF NRNK+SV VD TPEGQQ+I++LA Q DV+VENF G L R L Y
Sbjct: 67 EGKPTSHACYFAACNRNKRSVTVDMATPEGQQLIRELAMQSDVVVENFKTGGLKRYGLDY 126
Query: 324 KHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGI 379
LS +N +LIYCSVTGFG GPY R GYD++ ++ GL+ ITGH P G P +VG+
Sbjct: 127 ASLSALNPRLIYCSVTGFGHTGPYAPRAGYDLLIQAMSGLMSITGHADGEPGGGPMRVGV 186
Query: 380 ASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRW 439
A IDL TG+YA A++ AL +++TG+GQ ID LL +++L N GA +LNAG KR
Sbjct: 187 AVIDLFTGMYATTAILGALEARHRTGRGQHIDMALLDVAMAILANQGAGFLNAGNVPKRQ 246
Query: 440 GTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
G +H +VVP+Q F T +G + + G+D Q+ C+V + A D R+ A
Sbjct: 247 GNTHPSVVPYQDFPTQDGNMLLAIGNDGQFARFCEVAGVD-WASDERFTQNA 297
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 73/148 (49%), Gaps = 10/148 (6%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V + A D R+ A RV +R+ L + A T ++T EW+ + + + P +N
Sbjct: 279 FCEVAGVD-WASDERFTQNAGRVIHRDTLIPMMAALTRTRSTAEWVRLLEDKAVPCGPIN 337
Query: 61 SISQVFADEHI--QDIKLVKE-------ISHEKYGDIKIVGPAVAYSLTQPEVRTPPPAL 111
I Q F DE + + +++V+E + E + + S T +R PPAL
Sbjct: 338 HIGQAFDDEQVRARSLRIVQERYPGAQPPAGETVNRVVTTASPLRLSDTPVTLRHAPPAL 397
Query: 112 GEHTDYVLKDLLNYDETTIAKLKEKKIL 139
G+HTD VL++ L D + +L+ K +L
Sbjct: 398 GQHTDEVLRERLGLDAARLQELRAKGVL 425
>gi|397688581|ref|YP_006525900.1| lipid metabolism-related protein [Pseudomonas stutzeri DSM 10701]
gi|395810137|gb|AFN79542.1| putative lipid metabolism-related protein [Pseudomonas stutzeri DSM
10701]
Length = 406
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 139/294 (47%), Positives = 189/294 (64%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +L DLGAEVIKVE+PVTGD+ R WGPPFL NT +
Sbjct: 4 LSHIRVLDLSRVLAGPWAGQILGDLGAEVIKVERPVTGDDTRHWGPPFLKDAHGENTAEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+S+ +DF PEGQ+I+++L Q DVL+ENF G L L Y L IN
Sbjct: 64 AYYLSANRNKQSLTLDFTRPEGQRIVRELVAQSDVLLENFKVGGLAAHGLDYASLKAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG D P KVG+A D+ TG
Sbjct: 124 RLIYCSITGFGQDGPYASRAGYDFMIQGLGGLMSLTGRSDAEEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA V+AAL H+ +TG+GQ ID LL QV+ L N NYL G+ +R G +H N+V
Sbjct: 184 LYATVGVLAALAHRERTGEGQHIDTALLDVQVACLGNQALNYLTTGVAPRRMGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + + G+D Q++ C+V A DPR+ + +A + LI
Sbjct: 244 PYQDFPTADGDIILTVGNDGQFRKFCEVAGHPEWAADPRFASNKARVAHRAELI 297
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 69/139 (49%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V A DPR+ + RV +R L I T+ +TT EWL + P VN
Sbjct: 268 FCEVAGHPEWAADPRFASNKARVAHRAELIPLIRQTTVFRTTAEWLAALERAGVPCGPVN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD ++ L E+ H + G + V + S + PPP LGEH++ +L+
Sbjct: 328 DLAQVFADPQVRHRGLRIEMPHPQAGSVPQVASPLRLSASPVAYHRPPPLLGEHSEVLLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
LL D+ I L++ ++
Sbjct: 388 RLLGMDDGQIDVLRKAGVI 406
>gi|73540552|ref|YP_295072.1| L-carnitine dehydratase/bile acid-inducible protein F [Ralstonia
eutropha JMP134]
gi|72117965|gb|AAZ60228.1| L-carnitine dehydratase/bile acid-inducible protein F [Ralstonia
eutropha JMP134]
Length = 433
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 189/294 (64%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELS----- 271
LS++R+LDLTR++AGP+C LAD GA+VIK+E+P GD+ R WGPP+L T+ S
Sbjct: 31 LSHLRVLDLTRVLAGPWCAQNLADFGADVIKIERPGAGDDTRTWGPPWLKATDGSDTAEA 90
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV D +PEGQQ++++LA Q DV++EN+ G+L + L Y L +
Sbjct: 91 AYYLAANRNKRSVTCDISSPEGQQLVRELAAQSDVVLENYKVGQLKKYGLDYASLKAVKP 150
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+IYCSVTGFG GPY RPGYD I +GG + +TG P G P K G+A DL TG
Sbjct: 151 DIIYCSVTGFGQSGPYAARPGYDFIIQGMGGFMSLTGERDDLPGGGPQKAGVAISDLMTG 210
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
YA AV+AAL H+ +TG+GQ ID LL QV+ML N+ NYL +G +RWG +H N+V
Sbjct: 211 QYATIAVLAALAHRDRTGEGQYIDMALLDVQVAMLANMNTNYLASGQAPRRWGNAHPNIV 270
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F+ ++G++ + G+D Q++ LA DPR+ T L +A L+
Sbjct: 271 PYQTFQAADGWLIVAVGNDGQFRKFVNDGGQPELADDPRFSTNPLRVANRDVLV 324
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 70/131 (53%)
Query: 9 HLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFAD 68
LA DPR+ T LRV NR++L + +T +W+ + P +NS+ +VF D
Sbjct: 303 ELADDPRFSTNPLRVANRDVLVPILADMVRTRTRAQWIRDLEAAGVPCGPINSLDEVFED 362
Query: 69 EHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDET 128
E ++ L ++ H G++K+VG + S T PE PP LGEHTD +L + L Y
Sbjct: 363 EQVKARGLRVDLPHPSAGEVKLVGSPIKMSATPPEALRHPPLLGEHTDTILAESLGYSPE 422
Query: 129 TIAKLKEKKIL 139
IA L+ K ++
Sbjct: 423 KIAALRAKGVV 433
>gi|26986903|ref|NP_742328.1| CAIB/BAIF family protein [Pseudomonas putida KT2440]
gi|24981508|gb|AAN65792.1|AE016205_5 CAIB/BAIF family protein [Pseudomonas putida KT2440]
Length = 406
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 135/294 (45%), Positives = 193/294 (65%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE-----LS 271
LS++R+LDL+R++AGP+ +LADLGA+VIKVE+P +GD+ R WGPPFL + E +
Sbjct: 4 LSHLRVLDLSRVLAGPWSGQILADLGADVIKVERPGSGDDTRSWGPPFLKDVEGEDTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++++LA +CD+++ENF G L L Y+ L +N
Sbjct: 64 AYYLSANRNKRSVTIDFTQPEGQRLVRELAAKCDIVIENFKVGGLAAYGLDYQSLKAVNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
QLIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 QLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPEGEEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ +TG GQ +D LL QV+ L N NYL G +R G +H N+V
Sbjct: 184 LYSAVAMLAALAHRDQTGVGQHVDMALLDVQVACLANQAMNYLTTGTPPRRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR++T L +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDSQFRKFAEVAGQPQWAEDPRFVTNKLRVANRAELI 297
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 68/139 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR++T LRV NR L I T+ KTT EW+ + P +N
Sbjct: 268 FAEVAGQPQWAEDPRFVTNKLRVANRAELIPLIRQATVFKTTAEWVAQLEAAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+++Q+F D + L I H G + V + S T E R PP LGEHT+ VL
Sbjct: 328 NLAQMFQDPQVLARGLALNIPHPLAGSVPQVASPIRLSETPVEYRRAPPLLGEHTEVVLG 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
++L D + +L++ +L
Sbjct: 388 EVLGLDAGEVQRLRDAGVL 406
>gi|422654884|ref|ZP_16717610.1| CAIB/BAIF family protein [Pseudomonas syringae pv. actinidiae str.
M302091]
gi|330967953|gb|EGH68213.1| CAIB/BAIF family protein [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 406
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 194/294 (65%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGA+VIKVE+P GD+ R WGPPFL +NT +
Sbjct: 4 LSHIRVLDLSRVLAGPWAGQILADLGADVIKVERPGCGDDTRAWGPPFLQDAAGHNTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++K LA + D+++ENF G L L Y L INS
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQKLVKQLAAKSDIVIENFKVGGLAAYELDYASLKAINS 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY RPGYD + ++GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 RLIYCSITGFGQSGPYATRPGYDFMIQALGGLMSLTGLPEGEEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL ++ ++ GQ ID LL QV+ L N NYL G+ +R G +H N+V
Sbjct: 184 LYSTTAILAALANRDQSNVGQHIDMALLDVQVACLANQAMNYLTTGVAPERLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + + G+D Q++ +V A DPR+LT L +A + LI
Sbjct: 244 PYQSFPTADGDLILTVGNDSQFRKFAEVAGQSQWADDPRFLTNTLRVAHRAELI 297
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 69/139 (49%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+LT LRV +R L I T+ K T +W+ + V P A VN
Sbjct: 268 FAEVAGQSQWADDPRFLTNTLRVAHRAELIPLIRQVTVFKATAQWVAALEAVGVPCAPVN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD H+ L E+ H G + V + S T E R PP LGEHT VL+
Sbjct: 328 DLAQVFADPHVVARGLAIELPHALGGKVPQVASPIRLSETPVEYRRAPPMLGEHTAQVLE 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+LL +A L+ +L
Sbjct: 388 ELLGLGSDEVASLRAAGVL 406
>gi|226944578|ref|YP_002799651.1| L-carnitine dehydratase/bile acid-inducible protein F [Azotobacter
vinelandii DJ]
gi|226719505|gb|ACO78676.1| L-carnitine dehydratase/bile acid-inducible protein F [Azotobacter
vinelandii DJ]
Length = 407
Score = 287 bits (735), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 136/284 (47%), Positives = 187/284 (65%), Gaps = 9/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+RI+AGP+ + +L DLGAEVIKVE+P GD+ R WGPPFL +T+ +
Sbjct: 5 LSHIRVLDLSRILAGPWASQILGDLGAEVIKVERPGVGDDTRSWGPPFLKDETGRDTDTA 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NRNK+S+ +D PEGQ +I++LA + DVL+ENF G L + L Y L IN
Sbjct: 65 AYFLSANRNKRSITLDMAKPEGQALIRELAGRSDVLLENFKVGGLQQYGLDYAALKAINP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDG----PPCKVGIASIDLATG 387
+L+Y S+TGFG GPY +R GYD + +GGL+ +TG PDG P KVG+A D+ TG
Sbjct: 125 RLVYSSITGFGQTGPYANRAGYDFLIQGLGGLMSLTGLPDGREGAGPMKVGVALTDVLTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA A++AAL+H+ KTG+GQ ID +LL QV+ L N NY G KR G +H ++V
Sbjct: 185 LYATSAILAALVHREKTGEGQYIDVSLLDVQVACLANQALNYCTTGQSPKRLGNAHPSIV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P++ F T++GY+ + G+D Q+ C LA DPR+ T A
Sbjct: 245 PYEDFPTADGYMILAIGNDAQFARFCAEAGQAELAEDPRFATNA 288
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 66/139 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C LA DPR+ T A RV NR L + T+ + T W+ + + P +N
Sbjct: 269 FCAEAGQAELAEDPRFATNAERVRNRAALIPLLRRITVTRETSAWVRALEAKAIPCGPIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ VFAD ++ ++ + H G I V + S + R PP LGEHT VL+
Sbjct: 329 DLAGVFADPQVKAREMQLSLPHPGLGPIPQVASPIRLSGSPVTYRRAPPQLGEHTSEVLR 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
D+L E I +L+ + I+
Sbjct: 389 DVLGLSEQRIEQLRRQGIV 407
>gi|319653303|ref|ZP_08007405.1| hypothetical protein HMPREF1013_04021 [Bacillus sp. 2_A_57_CT2]
gi|317395224|gb|EFV75960.1| hypothetical protein HMPREF1013_04021 [Bacillus sp. 2_A_57_CT2]
Length = 395
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 130/266 (48%), Positives = 185/266 (69%), Gaps = 2/266 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L +RI+D++R++AGPFC+M+L DLGAEVIK+E TGDE R WGPPF+N S Y+ C
Sbjct: 5 LEGIRIIDVSRVLAGPFCSMILGDLGAEVIKIEHYKTGDETRWWGPPFVNGE--SAYYLC 62
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
NRNK+S+ ++ K+ EG++I + L DV+V+NF G L+++ LGY+ L EIN LI
Sbjct: 63 ANRNKQSITLNLKSEEGKEIFRKLVSTGDVVVQNFKSGTLEKMELGYESLKEINPSLIMA 122
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S+TGFGS GPYKD PGYD I ++ GL+ ITG DG P KVG+A D+ TGLY +++
Sbjct: 123 SITGFGSTGPYKDLPGYDYIIQAMSGLMSITGEADGSPMKVGVAIADVLTGLYTCIGILS 182
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
AL H+ KTG+GQ+ID +L+ QVS LINV +N+L +G+ +R G H N+VP+QVF +
Sbjct: 183 ALQHRNKTGEGQEIDISLMDCQVSSLINVASNFLCSGVIPQRLGNQHPNIVPYQVFSAKD 242
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLA 482
G + + G+D+Q++ + Q L+
Sbjct: 243 GELVVAVGNDEQFKRFSAALGRQDLS 268
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
Query: 8 QHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFA 67
Q L+ ++ R+EN+ L +E +KT +EW I P +N++ +F
Sbjct: 265 QDLSEVKEFIHNENRLENKSKLISILEELLSKKTKKEWKDILDKAGIPNGPINNVQDMFD 324
Query: 68 DEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDE 127
D I+ ++V E+ H G +++ G + S + ++R PP GEHT+ +L+ L Y
Sbjct: 325 DPQIRSREMVVEMDHPSIGTLRLTGSPIKLSKSPVKMRHHPPMFGEHTETILEQ-LGYHP 383
Query: 128 TTIAKLKEKKIL 139
I + ++ +I+
Sbjct: 384 DQIDRFRKNQII 395
>gi|421466658|ref|ZP_15915336.1| CoA-transferase family III protein [Acinetobacter radioresistens
WC-A-157]
gi|400202956|gb|EJO33950.1| CoA-transferase family III protein [Acinetobacter radioresistens
WC-A-157]
Length = 406
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 136/280 (48%), Positives = 187/280 (66%), Gaps = 9/280 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ R+LDL+RI+AGP+C+ +LADLGAEVIK+E+P +GD+ R+WGPP+L +T+ S
Sbjct: 5 LTGFRVLDLSRILAGPWCSQILADLGAEVIKIEKPYSGDDTRRWGPPWLKDDSGQDTQES 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NR K SV +D T EGQQ+I+ L + DVL+EN+ G L + L Y+ L+ IN
Sbjct: 65 AYYLSANRGKHSVAIDLATLEGQQLIRTLVLESDVLIENYKAGSLQKYGLDYETLAAINP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TGFG KGP + PGYD I +GG++ +TG P G P K G+A DL TG
Sbjct: 125 RLVYCSITGFGQKGPRANEPGYDFIIQGMGGMMSVTGERDDLPGGGPQKAGLAFADLTTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL + KTG+GQ ID LL TQV+ L + NYL +G R+G +HAN+V
Sbjct: 185 LYSAIAIQAALLSREKTGEGQHIDMALLDTQVASLSVLAMNYLTSGKVPGRFGNAHANIV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
P+QVFK G I G+D Q++ +C+ + L LAL P Y
Sbjct: 245 PYQVFKAKKGEFIIACGNDSQFKILCESIGLAELALHPHY 284
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 69/139 (49%), Gaps = 2/139 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + L LAL P Y + RV RE L ++ M + EEW+ I V P +N
Sbjct: 269 LCESIGLAELALHPHYRQNSGRVTYREELTALLQQHFMTRPAEEWVKIIHQVKVPVGMIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q +E + ++V + H + +G + S T E + PP L + T+ +L
Sbjct: 329 NLKQTLEEEQVIAREMVVNMPHSLQQNYTSIGSPIKLSKTPVEYQKAPPCLAQDTENILS 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
L+ ET I +LKEKKI+
Sbjct: 389 RYLS--ETEIIELKEKKII 405
>gi|422640074|ref|ZP_16703502.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
syringae Cit 7]
gi|330952466|gb|EGH52726.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
syringae Cit 7]
Length = 406
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 138/294 (46%), Positives = 193/294 (65%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
LS++R+LDL+R++AGP+ +LADLGA+VIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHIRVLDLSRVLAGPWAGQILADLGADVIKVERPGGGDDTRSWGPPFLQDAAGQNTTEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++++LA + D+++ENF L L Y+ L +N
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQRLVRELAAKSDIVIENFKVDGLAAYGLDYESLKVVNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY RPGYD + ++GGL+ +TG PDG P KVG+A D+ TG
Sbjct: 124 RLIYCSITGFGQSGPYARRPGYDFMIQALGGLMSLTGLPDGEEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ ++ GQ ID LL QV+ L N G NYL GI KR G +H N+V
Sbjct: 184 LYSTTAILAALAHRDQSDIGQYIDMALLDVQVACLANQGMNYLTTGIAPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + + G+D Q++ V A DPR+LT L +A + LI
Sbjct: 244 PYQDFPTADGDLILTVGNDSQFRKFAAVAGQPQWAEDPRFLTNKLRVAHRAELI 297
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 66/139 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
V A DPR+LT LRV +R L I T+ KTT +W+ + P VN
Sbjct: 268 FAAVAGQPQWAEDPRFLTNKLRVAHRAELIPLIRQVTVFKTTAQWVSELEAAGVPCGPVN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD H+ L E+ H G + V + S T E PP LGEHT VL+
Sbjct: 328 DLAQVFADPHVVARGLAIELPHVLAGRVPQVASPIRLSETPVEYTRAPPLLGEHTAQVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
LL E I L+E +L
Sbjct: 388 ALLGIGEEEITVLREAGVL 406
>gi|421857062|ref|ZP_16289418.1| L-carnitine dehydrogenase [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
gi|403187534|dbj|GAB75619.1| L-carnitine dehydrogenase [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
Length = 405
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 136/280 (48%), Positives = 187/280 (66%), Gaps = 9/280 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ R+LDL+RI+AGP+C+ +LADLGAEVIK+E+P +GD+ R+WGPP+L +T+ S
Sbjct: 4 LTGFRVLDLSRILAGPWCSQILADLGAEVIKIEKPYSGDDTRRWGPPWLKDDSGQDTQES 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NR K SV +D T EGQQ+I+ L + DVL+EN+ G L + L Y+ L+ IN
Sbjct: 64 AYYLSANRGKHSVAIDLATLEGQQLIRTLVLESDVLIENYKAGSLQKYGLDYETLAAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TGFG KGP + PGYD I +GG++ +TG P G P K G+A DL TG
Sbjct: 124 RLVYCSITGFGQKGPRANEPGYDFIIQGMGGMMSVTGERDDLPGGGPQKAGLAFADLTTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL + KTG+GQ ID LL TQV+ L + NYL +G R+G +HAN+V
Sbjct: 184 LYSAIAIQAALLSREKTGEGQHIDMALLDTQVASLSVLAMNYLTSGKVPGRFGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
P+QVFK G I G+D Q++ +C+ + L LAL P Y
Sbjct: 244 PYQVFKAKKGEFIIACGNDSQFKILCESIGLAELALHPHY 283
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 69/139 (49%), Gaps = 2/139 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + L LAL P Y + RV RE L ++ M + EEW+ I V P +N
Sbjct: 268 LCESIGLAELALHPHYRQNSGRVIYREELTALLQQHFMTRPAEEWVKIIHQVKVPVGMIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q +E + ++V + H + +G + S T E + PP L + T+ +L
Sbjct: 328 NLKQTLEEEQVIVREMVVNMPHSLQQNYTSIGSPIKLSKTPVEYQKAPPCLAQDTENILS 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
L+ ET I +LKEKKI+
Sbjct: 388 RYLS--ETEIIELKEKKII 404
>gi|422659227|ref|ZP_16721655.1| CAIB/BAIF family protein [Pseudomonas syringae pv. lachrymans str.
M302278]
gi|331017848|gb|EGH97904.1| CAIB/BAIF family protein [Pseudomonas syringae pv. lachrymans str.
M302278]
Length = 406
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 194/294 (65%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGA+VIKVE+P GD+ R WGPPFL +NT +
Sbjct: 4 LSHIRVLDLSRVLAGPWAGQILADLGADVIKVERPGCGDDTRAWGPPFLKDAAGHNTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++++LA + D+++ENF G L L Y L IN
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQKLVRELAAKSDIVIENFKVGGLAAHGLDYASLKAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY RPGYD + ++GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 RLIYCSITGFGQSGPYATRPGYDFMIQALGGLMSLTGLPEGEEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ ++ GQ ID LL QV+ L N NYL G+ +R G +H N+V
Sbjct: 184 LYSTTAILAALAHRDQSDVGQHIDMALLDVQVACLANQAMNYLTTGVAPERLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + + G+D Q++ +V A DPR+LT L +A + LI
Sbjct: 244 PYQSFPTADGDLILTVGNDSQFRKFAEVAGQSQWADDPRFLTNTLRVAHRAELI 297
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 69/139 (49%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+LT LRV +R L I T+ K T +W+ + + V P A VN
Sbjct: 268 FAEVAGQSQWADDPRFLTNTLRVAHRAELILLIRQVTVFKATAQWVAVLEAVGVPCAPVN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+++VFAD + L E+ H G + V + S T E R PP LGEHT VL+
Sbjct: 328 DLAKVFADPQVVARGLAIELPHALGGKVPQVASPIRLSETPVEYRRAPPMLGEHTAVVLE 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+LL +A L+ +L
Sbjct: 388 ELLGLGGDEVASLRAAGVL 406
>gi|416019560|ref|ZP_11566378.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
syringae pv. glycinea str. B076]
gi|320321711|gb|EFW77809.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
syringae pv. glycinea str. B076]
Length = 406
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 134/294 (45%), Positives = 193/294 (65%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
LS++R+LDL+R++AGP+ +LADLGA+VIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHIRVLDLSRVLAGPWAGQILADLGADVIKVERPRCGDDTRSWGPPFLQDAAGQNTTEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+S+ +DF PEGQ+++++LA + D+++ENF G L L Y+ L +N
Sbjct: 64 AYYLSANRNKQSITIDFTRPEGQKLVRELAAKSDIVIENFKVGGLASYGLDYESLKAVNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY RPGYD + ++GGL+ +TG PDG P KVG+A D+ TG
Sbjct: 124 RLIYCSITGFGQSGPYATRPGYDFMIQALGGLMSLTGLPDGEEGAGPAKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ ++ GQ ID LL QV+ L N NYL G+ +R G +H N+V
Sbjct: 184 LYSTTAILAALAHRDQSDTGQYIDMALLDVQVACLANQAMNYLTTGVAPRRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + + G+D Q++ +V A D R+LT L +A + LI
Sbjct: 244 PYQAFPTADGDLILTVGNDSQFRRFAEVAGQPQWADDSRFLTNKLRVAHRTELI 297
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 68/139 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A D R+LT LRV +R L I T+ KTT +W+ + P VN
Sbjct: 268 FAEVAGQPQWADDSRFLTNKLRVAHRTELIPLIRQATVFKTTAQWVDELEAAGVPCGPVN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD + L E+ H G + V + S T E R PP LGEHT VL+
Sbjct: 328 DLAQVFADPQVMARGLAIEMPHALGGRVPQVASPIRLSETPVEYRRAPPLLGEHTAQVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+LL + +A L++ +L
Sbjct: 388 ELLGLEGEEVAALRKSGVL 406
>gi|303317388|ref|XP_003068696.1| CAIB/BAIF family protein [Coccidioides posadasii C735 delta SOWgp]
gi|240108377|gb|EER26551.1| CAIB/BAIF family protein [Coccidioides posadasii C735 delta SOWgp]
Length = 444
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 140/309 (45%), Positives = 200/309 (64%), Gaps = 13/309 (4%)
Query: 197 LYENFYSLDLALSSENP-----SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQP 251
++ + SL L S P +LPL+ +R++D+TR++AGP+CT +L DLGAEVIK+E P
Sbjct: 18 VWNDGVSLVLRRSYSTPVHSADTLPLAGIRVVDMTRVLAGPYCTQILGDLGAEVIKIEHP 77
Query: 252 VTGDECRKWGPPFLNNTE-------LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQC 304
V GD+ R WGPPF E S Y+ VNRNKKS+ + F +G +I+ L K
Sbjct: 78 VRGDDTRAWGPPFAKYKEGTKDGPGESAYYLAVNRNKKSLGLSFAHKQGTEILHKLIKDA 137
Query: 305 DVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLL 364
DVLVEN++PG L + L Y+ LS +N +LIY S+TG+G GPY +R GYD++ + GL+
Sbjct: 138 DVLVENYIPGSLKKYKLDYETLSVLNPRLIYASITGYGQTGPYSNRAGYDVMVEAEMGLM 197
Query: 365 HITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLIN 424
HITG DGPP KVG+A DL TGLY A+MAALL + KTG+GQ ID L QV+ L N
Sbjct: 198 HITGERDGPPVKVGVAVTDLTTGLYTSNAIMAALLARMKTGRGQHIDSALSDCQVATLSN 257
Query: 425 VGANYLNAGI-EGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLAL 483
+ ++ L +G + RWGT+H ++VP++ +KT +G + +G G+DK + +C+ + A
Sbjct: 258 LASSALISGQKDSGRWGTAHPSIVPYRGYKTKDGDILLGGGNDKLFGILCERLGHPEWAT 317
Query: 484 DPRYLTGAL 492
D R++T L
Sbjct: 318 DSRFVTNGL 326
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 81/139 (58%), Gaps = 1/139 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + A D R++T LRV+NRE + + IE +KTT+EWL IF+G PY+ VN
Sbjct: 306 LCERLGHPEWATDSRFVTNGLRVKNREAIDRLIEEIVKQKTTQEWLEIFEGSGMPYSAVN 365
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I H++ +V+E+ H G +K+V V YS P +RTPPP LG+HTD VL+
Sbjct: 366 DIQGTLNHAHVRARGMVQEVEHPICGPMKLVNTPVKYSHATPGIRTPPPTLGQHTDEVLQ 425
Query: 121 DLLNYDETTIAKLKEKKIL 139
D L + I +L+ ++
Sbjct: 426 D-LGFGTDNIDQLRRDGVV 443
>gi|398838728|ref|ZP_10595997.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM102]
gi|398114913|gb|EJM04709.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM102]
Length = 406
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 139/294 (47%), Positives = 190/294 (64%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWAGQILADLGAEVIKVERPGNGDDTRAWGPPFLKDAYGENTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQQ++++LA + D+L+ENF G L L Y+ L IN
Sbjct: 64 AYYLAANRNKQSVTIDFTRPEGQQLVRELAAKSDILIENFKVGGLATYGLDYESLKAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 KLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPEGDEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ + G GQ ID LL QV+ L N NYL G+ KR G +H N+V
Sbjct: 184 LYSAVAILAALAHRDQGGGGQHIDMALLDVQVACLANQAMNYLTTGVAPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ T L +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAQVAGQPQWADDPRFATNKLRVANRAALI 297
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 67/139 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ T LRV NR L I T+ KTT EW+ + P +N
Sbjct: 268 FAQVAGQPQWADDPRFATNKLRVANRAALIPLIRQATVFKTTAEWVAQLEQAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++Q+FAD +Q L E+ H G + V + S T E R+ PP LGEHT VL+
Sbjct: 328 DLAQMFADPQVQARGLAIELPHALAGMVPQVASPIRLSETPVEYRSAPPMLGEHTLEVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L D +A K +L
Sbjct: 388 RVLGLDAGVVAGFKASGVL 406
>gi|403676859|ref|ZP_10938725.1| CoA-transferase family III family protein [Acinetobacter sp. NCTC
10304]
Length = 405
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 135/284 (47%), Positives = 191/284 (67%), Gaps = 9/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ +T+ +
Sbjct: 4 LNGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPKVGDDTRSWGPPWMKDDSGQDTQEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK SV +D +P+GQ++IK L + DV++EN+ G L + L YK LS IN
Sbjct: 64 AYYQSTNRNKLSVAIDIASPDGQELIKALIQDTDVVIENYKAGSLKKYGLDYKSLSAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TGFG GP + PGYD I +GGL+ +TG P G P KVG+A DLATG
Sbjct: 124 ELVYCSITGFGQTGPRAEEPGYDFIIQGMGGLMSVTGERDDLPGGGPQKVGVAFSDLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL+++ TG GQ ID LL Q++ + N G NYL++G KR+G +HAN+V
Sbjct: 184 LYSTIAIQAALLNRHVTGLGQYIDMALLDVQIATMANQGMNYLSSGNIPKRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P+QVFK S+ I G+D Q+ +C+ + L L DPR+ A
Sbjct: 244 PYQVFKASDRDFIIACGNDTQFIQLCRSIGLPDLPNDPRFARNA 287
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 79/140 (56%), Gaps = 2/140 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + L L DPR+ A R+++R+ + ++ + KT +EW+ P +N
Sbjct: 268 LCRSIGLPDLPNDPRFARNADRIKHRDEIIGILQTHFLTKTADEWVDAIYAAKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q F + + +++ E++H + +K++G + S T E +T PP LGEHT VL
Sbjct: 328 NLEQAFEEPQVIAREMLVEMNHPQREKLKVIGSPIKLSRTPVEYKTAPPLLGEHTQAVLG 387
Query: 121 DLLNYDETTIAKLKEKKILG 140
+++ ++ +A+LKEK ++G
Sbjct: 388 RIVSSEK--LAELKEKGVIG 405
>gi|289648078|ref|ZP_06479421.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
syringae pv. aesculi str. 2250]
Length = 406
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 134/294 (45%), Positives = 193/294 (65%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
LS++R+LDL+R++AGP+ +LADLGA+VIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHIRVLDLSRVLAGPWAGQILADLGADVIKVERPGCGDDTRSWGPPFLQDAAGQNTTEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+S+ +DF PEGQ+++++LA + D+++ENF G L L Y+ L +N
Sbjct: 64 AYYLSANRNKQSITIDFTRPEGQKLVRELAAKSDIIIENFKVGGLASYGLDYESLKAVNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY RPGYD + ++GGL+ +TG PDG P KVG+A D+ TG
Sbjct: 124 RLIYCSITGFGQSGPYATRPGYDFMIQALGGLMSLTGLPDGEEGAGPAKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ ++ GQ ID LL QV+ L N NYL G+ +R G +H N+V
Sbjct: 184 LYSTTAILAALAHRDQSNTGQYIDMALLDVQVACLANQAMNYLTTGVAPRRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + + G+D Q++ +V A D R+LT L +A + LI
Sbjct: 244 PYQAFPTADGDLILTVGNDSQFRRFAEVAGQPQWADDSRFLTNKLRVAHRTELI 297
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 68/139 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A D R+LT LRV +R L I T+ KTT +W+ + P VN
Sbjct: 268 FAEVAGQPQWADDSRFLTNKLRVAHRTELIPLIRQATVFKTTAQWVDELEAAGVPCGPVN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD + L E+ H G + V + S T E R PP LGEHT VL+
Sbjct: 328 DLAQVFADPQVMARGLAIEMPHALGGRVPQVASPIRLSETPVEYRRAPPLLGEHTAQVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+LL + +A L++ ++
Sbjct: 388 ELLGLEGEEVAALRKSGVV 406
>gi|443645482|ref|ZP_21129332.1| Acyl-CoA transferase/carnitine dehydratase family protein
[Pseudomonas syringae pv. syringae B64]
gi|443285499|gb|ELS44504.1| Acyl-CoA transferase/carnitine dehydratase family protein
[Pseudomonas syringae pv. syringae B64]
Length = 406
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 193/294 (65%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
LS++R+LDL+R++AGP+ +LADLGA+VIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHIRVLDLSRVLAGPWAGQILADLGADVIKVERPGCGDDTRSWGPPFLQDAAGQNTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++++LA + D+++ENF L L Y+ L +N
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQRLVRELAAKSDIVIENFKVDGLAAYGLDYESLKAVNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY RPGYD + ++GGL+ +TG PDG P KVG+A D+ TG
Sbjct: 124 RLIYCSITGFGQSGPYARRPGYDFMIQALGGLMSLTGLPDGEEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ ++ GQ ID LL QV+ + N G NYL G+ KR G +H N+V
Sbjct: 184 LYSTTAILAALAHRDQSDIGQYIDMALLDVQVACMANQGMNYLTTGVAPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + + G+D Q++ V A DPR+LT L +A + LI
Sbjct: 244 PYQDFPTADGDLILTVGNDSQFRKFAAVAGQPQWAEDPRFLTNKLRVAHRAELI 297
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 66/139 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
V A DPR+LT LRV +R L I T+ K T +W+ + P VN
Sbjct: 268 FAAVAGQPQWAEDPRFLTNKLRVAHRAELIPLIRQVTVFKATAQWVSELEAAGVPCGPVN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD H+ L E+ H G + V + S T E PP LGEHT VL+
Sbjct: 328 DLAQVFADPHVVARGLAIELPHALAGRVPQVASPIRLSETPVEYTRAPPLLGEHTAQVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
LL E + +L+E +L
Sbjct: 388 ALLGIGEEELTRLREAGVL 406
>gi|421141535|ref|ZP_15601517.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
fluorescens BBc6R8]
gi|404507202|gb|EKA21190.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
fluorescens BBc6R8]
Length = 406
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 139/294 (47%), Positives = 190/294 (64%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWAGQILADLGAEVIKVERPGNGDDTRAWGPPFLKDAYGENTTEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ++++DLA + D+L+ENF G L L Y+ L EIN
Sbjct: 64 AYYLSANRNKESVTIDFTRPEGQKLVRDLAAKSDILIENFKVGGLAAYGLDYESLKEINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 ELIYCSITGFGQTGPYATRAGYDFMIQGLGGLMSLTGRPEGEDGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AA+ H+ G GQ ID LL QV+ L N NYL G+ KR G +H N+V
Sbjct: 184 LYSTVAILAAMAHRDHDGGGQHIDMALLDVQVACLANQAMNYLTTGVSPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ T L +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAEVAGQPQWADDPRFATNKLRVANRAVLI 297
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 70/139 (50%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ T LRV NR +L I T+ K+T EW+ + V P +N
Sbjct: 268 FAEVAGQPQWADDPRFATNKLRVANRAVLIPLIRQATVFKSTAEWVAQLERVGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD ++ L ++ H G + V + S T E R+ PP LGEHT VL+
Sbjct: 328 DLAQVFADPQVKARGLAMQLPHALAGTVPQVASPMRLSKTPVEYRSAPPLLGEHTHQVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L ++ L+E ++
Sbjct: 388 QVLGLTPANVSALREAGVI 406
>gi|422665839|ref|ZP_16725709.1| L-carnitine dehydratase/bile acid-inducible protein F, partial
[Pseudomonas syringae pv. aptata str. DSM 50252]
gi|330976259|gb|EGH76321.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
syringae pv. aptata str. DSM 50252]
Length = 367
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 192/294 (65%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
LS++R+LDL+R++AGP+ +LADLGA+VIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHIRVLDLSRVLAGPWAGQILADLGADVIKVERPGCGDDTRSWGPPFLQDAAGQNTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++++LA + D+++ENF L L Y+ L +N
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQRLVRELAAKSDIVIENFKVDGLAAYGLDYESLKAVNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY RPGYD + ++GGL+ TG PDG P KVG+A D+ TG
Sbjct: 124 RLIYCSITGFGQSGPYARRPGYDFMIQALGGLMSFTGLPDGEEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ ++ GQ ID LL QV+ L N G NYL G+ KR G +H N+V
Sbjct: 184 LYSTTAILAALAHRDQSDIGQYIDMALLDVQVACLANQGMNYLTTGVAPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + + G+D Q++ V A DPR+LT L +A + LI
Sbjct: 244 PYQDFPTADGDLILTVGNDSQFRKFAAVAGQPQWAEDPRFLTNKLRVAHRAELI 297
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
V A DPR+LT LRV +R L I T+ K T +W+ + P VN
Sbjct: 268 FAAVAGQPQWAEDPRFLTNKLRVAHRAELIPLIRQVTVFKATAQWVSELEAAGVPCGPVN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIV 91
++QVFAD H+ L E+ H G + V
Sbjct: 328 DLAQVFADPHVVARGLAIELPHALAGRVPQV 358
>gi|330792919|ref|XP_003284534.1| hypothetical protein DICPUDRAFT_27830 [Dictyostelium purpureum]
gi|325085564|gb|EGC38969.1| hypothetical protein DICPUDRAFT_27830 [Dictyostelium purpureum]
Length = 442
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 138/289 (47%), Positives = 190/289 (65%), Gaps = 4/289 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE---LST 272
PL +++LDL R++AGP+ T LL DLGA+VIKVE GD+ R WGPPF ++E S
Sbjct: 41 PLGGLKVLDLARVLAGPWTTQLLGDLGADVIKVESIEKGDDTRSWGPPFRVDSEGNKSSA 100
Query: 273 YFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQ 332
YF+C NRNK+S+ VD T +GQ+IIK LA + DV++ENF G L + L YK +SE+N
Sbjct: 101 YFSCTNRNKRSIAVDISTEKGQEIIKSLAAEADVMIENFKVGGLKKYKLDYKSISELNPS 160
Query: 333 LIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHG 392
++YCS+TGFG GPY PGYD ++GGL+ ITG + P K G+A +D+ TGLYA+
Sbjct: 161 IVYCSITGFGQSGPYASFPGYDFSIQAMGGLMGITGDENN-PYKCGVAIVDVMTGLYANV 219
Query: 393 AVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVF 452
A+ AAL ++YKTGKGQ ID +LL Q + L N ANYL G KR G SH ++ P+
Sbjct: 220 AIQAALHNRYKTGKGQYIDISLLDVQSAFLANHEANYLLTGQNSKRIGNSHPSISPYDSL 279
Query: 453 KTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
KT +G++ + G++ Q+ MCKV+NL L DP + T +A + L+
Sbjct: 280 KTKDGFIVVAVGNNSQFTSMCKVLNLNDLPNDPLFNTNPNRVANRAQLL 328
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 77/145 (53%), Gaps = 8/145 (5%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
MCKV+NL L DP + T RV NR L + +T++ TEE +F + P + +N
Sbjct: 299 MCKVLNLNDLPNDPLFNTNPNRVANRAQLLDILTKETLKYETEELDQLFSNSNVPSSPIN 358
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRT------PPPALGEH 114
++ +V+ + I+ +V + I ++G + +S T + PPP LGEH
Sbjct: 359 TLDKVYNHKQIKHRNMVWSLYQTD--TINMIGNPIHFSETDLHSKQSIKENLPPPQLGEH 416
Query: 115 TDYVLKDLLNYDETTIAKLKEKKIL 139
TD VLK++L+ E + +L++ KI+
Sbjct: 417 TDQVLKNVLSLSENELKELRDNKII 441
>gi|412340951|ref|YP_006969706.1| hypothetical protein BN112_3669 [Bordetella bronchiseptica 253]
gi|408770785|emb|CCJ55583.1| conserved hypothetical protein [Bordetella bronchiseptica 253]
Length = 420
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 136/280 (48%), Positives = 187/280 (66%), Gaps = 9/280 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL-----S 271
LS+VR+LDLTR++AGP+CT +LADLGA+VIKVE+PV GD+ R WGPP++ N + S
Sbjct: 5 LSHVRVLDLTRVLAGPWCTQMLADLGADVIKVERPVLGDDTRHWGPPWIENDDGERVGDS 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YFT NRNK+S+ +D TP+GQ ++++LA QCDVLVEN+ G L R L Y L E+N
Sbjct: 65 AYFTSANRNKRSIAIDIATPQGQALVRELALQCDVLVENYKVGDLARYGLSYADLRELNP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TG+G GPY PGYD I GGL+ ITG P G P K IA D+ TG
Sbjct: 125 RLVYCSITGYGQDGPYAHLPGYDFIFQGEGGLMSITGERDDKPGGGPMKSAIAVADVLTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
L A +++A+ ++ TG GQ ID LL T V+ N A+Y +G +RWG H N+
Sbjct: 185 LNATIGILSAIESRHATGVGQHIDVALLDTVVNFGANQIASYFASGAIPRRWGNEHPNLA 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
P+Q F T++G++ IG G+D QY+ +C+++ LALD R+
Sbjct: 245 PYQTFPTADGHIIIGCGNDGQYRRLCELIGCPELALDARF 284
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+++ LALD R+ R NR L + +EA+ + + WL + P +N
Sbjct: 269 LCELIGCPELALDARFADMPGRNVNRAALVEALEARFRTQPSRHWLDLLANSEVPNGSIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ +QVF + + ++ H + +V + S T + R PPP G+HT VL
Sbjct: 329 NYAQVFEHPQVVHRGMRVDMPHPGGTTVGMVANPIRLSGTPVQYRHPPPLRGQHTAEVLA 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
LL+ I L+ +I+
Sbjct: 389 SLLHKSGADIEALEAARII 407
>gi|213968565|ref|ZP_03396708.1| CAIB/BAIF family protein [Pseudomonas syringae pv. tomato T1]
gi|301383537|ref|ZP_07231955.1| CAIB/BAIF family protein [Pseudomonas syringae pv. tomato Max13]
gi|302062587|ref|ZP_07254128.1| CAIB/BAIF family protein [Pseudomonas syringae pv. tomato K40]
gi|302130254|ref|ZP_07256244.1| CAIB/BAIF family protein [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|213926853|gb|EEB60405.1| CAIB/BAIF family protein [Pseudomonas syringae pv. tomato T1]
Length = 406
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 194/294 (65%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGA+VIKVE+P GD+ R WGPPFL +NT +
Sbjct: 4 LSHIRVLDLSRVLAGPWAGQILADLGADVIKVERPGCGDDTRAWGPPFLKDAAGHNTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++++LA + D+++ENF G L L Y L IN
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQKLVRELAAKSDIVIENFKVGGLAAHGLDYASLKAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY RPGYD + ++GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 RLIYCSITGFGQSGPYATRPGYDFMIQALGGLMSLTGLPEGEEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ ++ GQ ID LL QV+ L N NYL G+ +R G +H N+V
Sbjct: 184 LYSTTAILAALAHRDQSDVGQHIDMALLDVQVACLANQAMNYLTTGVAPERLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + + G+D Q++ +V A DPR+LT L +A + LI
Sbjct: 244 PYQSFPTADGDLILTVGNDSQFRKFAEVAGQSQWADDPRFLTNTLRVAHRAELI 297
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 69/139 (49%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+LT LRV +R L I T+ K T +W+ + + V P A VN
Sbjct: 268 FAEVAGQSQWADDPRFLTNTLRVAHRAELIPLIRQVTVFKATAQWVAVLEAVGVPCAPVN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+++VFAD + L E+ H G + V + S T E R PP LGEHT VL+
Sbjct: 328 DLAKVFADPQVVARGLAIELPHALGGKVPQVASPIRLSETPVEYRRAPPMLGEHTSVVLE 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+LL +A L+ +L
Sbjct: 388 ELLGLGGDEVASLRAAGVL 406
>gi|33603726|ref|NP_891286.1| hypothetical protein BB4753 [Bordetella bronchiseptica RB50]
gi|427816737|ref|ZP_18983801.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
gi|33577851|emb|CAE35116.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
gi|410567737|emb|CCN25308.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
Length = 420
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 136/280 (48%), Positives = 187/280 (66%), Gaps = 9/280 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL-----S 271
LS+VR+LDLTR++AGP+CT +LADLGA+VIKVE+PV GD+ R WGPP++ N + S
Sbjct: 5 LSHVRVLDLTRVLAGPWCTQMLADLGADVIKVERPVLGDDTRHWGPPWIENDDGERVGDS 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YFT NRNK+S+ +D TP+GQ ++++LA QCDVLVEN+ G L R L Y L E+N
Sbjct: 65 AYFTSANRNKRSIAIDIATPQGQALVRELALQCDVLVENYKVGDLARYGLSYADLRELNP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TG+G GPY PGYD I GGL+ ITG P G P K IA D+ TG
Sbjct: 125 RLVYCSITGYGQDGPYAHLPGYDFIFQGEGGLMSITGERDDKPGGGPMKSAIAVADVLTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
L A +++A+ ++ TG GQ ID LL T V+ N A+Y +G +RWG H N+
Sbjct: 185 LNATIGILSAIESRHATGVGQHIDVALLDTVVNFGANQIASYFASGAIPRRWGNEHPNLA 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
P+Q F T++G++ IG G+D QY+ +C+++ LALD R+
Sbjct: 245 PYQTFPTADGHIIIGCGNDGQYRRLCELIGCPELALDARF 284
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+++ LALD R+ R NR L + +EA+ + + WL + P +N
Sbjct: 269 LCELIGCPELALDARFADMPGRNVNRAALVEALEARFRTQPSRHWLDLLANSEVPNGSIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ +QVF + + ++ H + +V + S T + R PPP G+HT VL
Sbjct: 329 NYAQVFEHPQVVHRGMRVDMPHPGGTTVGMVANPIRLSGTPVQYRHPPPLRGQHTAEVLA 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
LL+ I L+ +I+
Sbjct: 389 SLLHKSGADIEALEAARII 407
>gi|242802472|ref|XP_002483978.1| alpha methylacyl-CoA racemase, putative [Talaromyces stipitatus
ATCC 10500]
gi|218717323|gb|EED16744.1| alpha methylacyl-CoA racemase, putative [Talaromyces stipitatus
ATCC 10500]
Length = 478
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 133/295 (45%), Positives = 196/295 (66%), Gaps = 7/295 (2%)
Query: 202 YSLDLALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWG 261
Y A S+ LPL+ VR+LD++R++AGP+CT +L DLGA++IKVE P GD+ R WG
Sbjct: 62 YGASNATSTGKSKLPLAGVRVLDMSRVLAGPYCTQILGDLGADIIKVEHPGRGDDTRAWG 121
Query: 262 PPFLNNTE------LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGK 315
PPF + S Y+ VNRNKKS+ + F PEG +I+ +LAK CDVLVEN++P
Sbjct: 122 PPFAEYKDGREGPGESAYYLSVNRNKKSLGLSFAHPEGVEILHELAKNCDVLVENYLPSS 181
Query: 316 LDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPC 375
L + N+ Y + +IN ++IY S+TG+G GPY +RPG+D++ + GL+H+TG DGPP
Sbjct: 182 LKKYNMDYDSIRKINPRMIYASITGYGQTGPYSNRPGFDVMVEAEFGLMHLTGSRDGPPV 241
Query: 376 KVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAG-I 434
KVG+A DL TGLYA ++MAALL + TG+GQ +D L Q + L N+ + L +G
Sbjct: 242 KVGVAVTDLTTGLYACNSIMAALLARANTGEGQHLDVCLSDVQTATLANMAESVLISGKR 301
Query: 435 EGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+ RWGT+H +VVP+Q FKT++G + +G +D+ + +C+ + + DP+Y+T
Sbjct: 302 DSGRWGTAHPSVVPYQGFKTADGDIFLGGANDRLFGILCEKLGKPEWSKDPKYVT 356
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 80/139 (57%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + + DP+Y+T RV NR+ L IE +T ++TT+EWL I +G PYA VN
Sbjct: 339 LCEKLGKPEWSKDPKYVTNNERVRNRKELEDLIEVETTKRTTQEWLDILKGSGLPYAAVN 398
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ EH + +V+EI H G IK++ P V YS P +R+PPP LGEHTD VL+
Sbjct: 399 DVMGTLNHEHTKARGMVQEIDHPSCGPIKVLSPPVKYSNANPSIRSPPPLLGEHTDEVLE 458
Query: 121 DLLNYDETTIAKLKEKKIL 139
++ I L+ K ++
Sbjct: 459 YVVGLKRDRIQSLRAKGVV 477
>gi|289627366|ref|ZP_06460320.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
syringae pv. aesculi str. NCPPB 3681]
gi|422584712|ref|ZP_16659814.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
syringae pv. aesculi str. 0893_23]
gi|330869521|gb|EGH04230.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
syringae pv. aesculi str. 0893_23]
Length = 406
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 134/294 (45%), Positives = 193/294 (65%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
LS++R+LDL+R++AGP+ +LADLGA+VIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHIRVLDLSRVLAGPWAGQILADLGADVIKVERPGCGDDTRSWGPPFLQDAAGQNTTEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+S+ +DF PEGQ+++++LA + D+++ENF G L L Y+ L +N
Sbjct: 64 AYYLSANRNKQSITIDFTRPEGQKLVRELAAKSDIIIENFKVGGLASYGLDYESLKAVNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY RPGYD + ++GGL+ +TG PDG P KVG+A D+ TG
Sbjct: 124 RLIYCSITGFGQSGPYATRPGYDFMIQALGGLMSLTGLPDGEEGAGPAKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ ++ GQ ID LL QV+ L N NYL G+ +R G +H N+V
Sbjct: 184 LYSTTAILAALAHRDQSNTGQYIDMALLDVQVACLANQAMNYLATGVAPRRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + + G+D Q++ +V A D R+LT L +A + LI
Sbjct: 244 PYQAFPTADGDLILTVGNDSQFRRFAEVAGQPQWADDSRFLTNKLRVAHRTELI 297
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 68/139 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A D R+LT LRV +R L I T+ KTT +W+ + P VN
Sbjct: 268 FAEVAGQPQWADDSRFLTNKLRVAHRTELIPLIRQATVFKTTAQWVDELEAAGVPCGPVN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD + L E+ H G + V + S T E R PP LGEHT VL+
Sbjct: 328 DLAQVFADPQVMARGLAIEMPHALGGRVPQVASPIRLSETPVEYRRAPPLLGEHTAQVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+LL + +A L++ ++
Sbjct: 388 ELLGLEGEEVAALRKSGVV 406
>gi|409042068|gb|EKM51552.1| hypothetical protein PHACADRAFT_199064 [Phanerochaete carnosa
HHB-10118-sp]
Length = 432
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 143/295 (48%), Positives = 191/295 (64%), Gaps = 21/295 (7%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE------ 269
PL ++I+DLTR++AGP TMLLADLGA+VIKVE+ GD+ R W PP TE
Sbjct: 42 PLKGIKIVDLTRVLAGPTATMLLADLGADVIKVEEVTRGDDTRAWNPPSAPRTEDGPASH 101
Query: 270 ---LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHL 326
S YF VNRNK+S+ VDFK PEG I+ L Q DVLVEN++ GKL + LG++
Sbjct: 102 LPPESAYFLAVNRNKRSITVDFKQPEGLAIVHRLISQADVLVENYISGKLATIGLGWEDC 161
Query: 327 SEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLAT 386
+IN +LIY S+TG+G GPY GYD++ + GL+HITG P+GPPCKVG+A+ D+AT
Sbjct: 162 RKINPRLIYTSITGYGQTGPYAKAAGYDVVIEAEAGLMHITGEPNGPPCKVGVAATDVAT 221
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANV 446
GLYAHGA+MAALL + +TGKG IDCNL +QV+ L N+ +NYL A E R GTSH ++
Sbjct: 222 GLYAHGAIMAALLSRQQTGKGVWIDCNLFESQVAGLANIASNYLIAEQEAGRHGTSHPSI 281
Query: 447 VPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
VP+Q GYV G + K++ L DP++ + A +A + ++
Sbjct: 282 VPYQY-----GYVQFGLLA-------SKILKRPELLSDPKFSSNAARVANRAEIV 324
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 70/138 (50%), Gaps = 1/138 (0%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
K++ L DP++ + A RV NR + K I ME + WL F G+ P+ +N+
Sbjct: 296 SKILKRPELLSDPKFSSNAARVANRAEIVKIITDTLMEHNRDHWLKEFDGLGVPFGPINN 355
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
I Q F + I H + G IK+V PAV Y+ + V PPP L +HTD VL +
Sbjct: 356 IKQTFGHPQAVARGVTVAIEHPRAGKIKMVAPAVTYNGQRMPVNRPPPYLSQHTDEVLYE 415
Query: 122 LLNYDETTIAKLKEKKIL 139
L Y+ + I + K+I+
Sbjct: 416 -LGYNSSQIEGFRNKRIV 432
>gi|298155973|gb|EFH97082.1| CAIB/BAIF family protein [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
Length = 406
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 134/294 (45%), Positives = 193/294 (65%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
LS++R+LDL+R++AGP+ +LADLGA+VIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHIRVLDLSRVLAGPWAGQILADLGADVIKVERPGCGDDTRSWGPPFLQDAAGQNTTEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+S+ +DF PEGQ+++++LA + D+++ENF G L L Y+ L +N
Sbjct: 64 AYYLSANRNKQSITIDFTRPEGQKLVRELAAKSDIVIENFKVGGLASYGLDYESLKAVNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY RPGYD + ++GGL+ +TG PDG P KVG+A D+ TG
Sbjct: 124 RLIYCSITGFGQSGPYATRPGYDFMIQALGGLMSLTGLPDGEEGAGPAKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ ++ GQ ID LL QV+ L N NYL G+ +R G +H N+V
Sbjct: 184 LYSTTAILAALAHRDQSNTGQYIDMALLDVQVACLANQAMNYLTTGVAPRRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + + G+D Q++ +V A D R+LT L +A + LI
Sbjct: 244 PYQAFPTADGDLILTVGNDSQFRRFAEVAGQPQWADDSRFLTNKLRVAHRTELI 297
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 68/139 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A D R+LT LRV +R L I T+ KTT +W+ + P VN
Sbjct: 268 FAEVAGQPQWADDSRFLTNKLRVAHRTELIPLIRQATVFKTTAQWVDELEAAGVPCGPVN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD + L E+ H G + V + S T E R PP LGEHT VL+
Sbjct: 328 DLAQVFADPQVMARGLAIEMPHALGGRVPQVASPIRLSETPVEYRRAPPLLGEHTAQVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+LL + +A L++ ++
Sbjct: 388 ELLGLEGEEVAALRKSGVV 406
>gi|416022397|ref|ZP_11567590.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
syringae pv. glycinea str. race 4]
gi|422405818|ref|ZP_16482856.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
syringae pv. glycinea str. race 4]
gi|320331463|gb|EFW87403.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
syringae pv. glycinea str. race 4]
gi|330880907|gb|EGH15056.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
syringae pv. glycinea str. race 4]
Length = 406
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 134/294 (45%), Positives = 193/294 (65%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
LS++R+LDL+R++AGP+ +LADLGA+VIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHIRVLDLSRVLAGPWAGQILADLGADVIKVERPGCGDDTRSWGPPFLQDAAGQNTTEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+S+ +DF PEGQ+++++LA + D+++ENF G L L Y+ L +N
Sbjct: 64 AYYLSANRNKQSITIDFTRPEGQKLVRELAAKSDIVIENFKVGGLASYGLDYESLKAVNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY RPGYD + ++GGL+ +TG PDG P KVG+A D+ TG
Sbjct: 124 RLIYCSITGFGQSGPYATRPGYDFMIQALGGLMSLTGLPDGEEGAGPAKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ ++ GQ ID LL QV+ L N NYL G+ +R G +H N+V
Sbjct: 184 LYSTTAILAALAHRDQSDTGQYIDMALLDVQVACLANQAMNYLTTGVAPRRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + + G+D Q++ +V A D R+LT L +A + LI
Sbjct: 244 PYQAFPTADGDLILTVGNDSQFRRFAEVAGQPQWADDSRFLTNKLRVAHRTELI 297
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 68/139 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A D R+LT LRV +R L I T+ KTT +W+ + P VN
Sbjct: 268 FAEVAGQPQWADDSRFLTNKLRVAHRTELIPLIRQATVFKTTAQWVDELEAAGVPCGPVN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD + L E+ H G + V + S T E R PP LGEHT VL+
Sbjct: 328 DLAQVFADPQVMARGLAIEMPHALGGRVPQVASPIRLSETPVEYRRAPPLLGEHTAQVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+LL + +A L++ +L
Sbjct: 388 ELLGLEGEEVAALRKSGVL 406
>gi|427822806|ref|ZP_18989868.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
gi|410588071|emb|CCN03125.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
Length = 420
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 134/280 (47%), Positives = 188/280 (67%), Gaps = 9/280 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL-----S 271
LS+VR+LDLTR++AGP+CT +LADLGA+VIKVE+PV GD+ R WGPP++ N + S
Sbjct: 5 LSHVRVLDLTRVLAGPWCTQMLADLGADVIKVERPVLGDDTRHWGPPWIENDDGERVGDS 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YFT NRNK+S+ +D TP+GQ ++++LA+QCDVLVEN+ G L R L Y L E+N
Sbjct: 65 AYFTSANRNKRSIAIDIATPQGQALVRELAQQCDVLVENYKVGDLARYGLSYADLRELNP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TG+G GPY PGYD I GGL+ ITG P G P K IA D+ TG
Sbjct: 125 RLVYCSITGYGQDGPYAHLPGYDFIFQGEGGLMSITGERDDKPGGGPMKSAIAVADVLTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
L A +++A+ ++ TG GQ ID LL T V+ N A+Y +G+ +RWG H N+
Sbjct: 185 LNATIGILSAIESRHATGVGQHIDVALLDTVVNFGANQIASYFASGVLPRRWGNEHPNLA 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
P+Q F T++G++ IG G+D Q++ +C+++ LA DP +
Sbjct: 245 PYQTFPTADGHIIIGCGNDGQFRRLCELIGCPELAGDPHF 284
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 63/139 (45%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+++ LA DP + R NR L + +EA+ + + WL + P +N
Sbjct: 269 LCELIGCPELAGDPHFADMPGRNVNRAALVEALEARFRTQPSRHWLDLLANSEVPNGSIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ +QVF + + ++ H + +V + S T + R PPP G+HT VL
Sbjct: 329 NYAQVFEHPQVVHRGMRVDMPHPGGTTVGMVANPIRLSGTPVQYRYPPPLRGQHTAEVLA 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
LL+ I L+ +I+
Sbjct: 389 SLLHKSGADIEALEAARII 407
>gi|337277960|ref|YP_004617431.1| hypothetical protein Rta_03420 [Ramlibacter tataouinensis TTB310]
gi|334729036|gb|AEG91412.1| Conserved hypothetical protein [Ramlibacter tataouinensis TTB310]
Length = 411
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 138/285 (48%), Positives = 186/285 (65%), Gaps = 14/285 (4%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L +R+LDL+R++AGP+CT LADLGA+VIKVE+P +GD+ R WGPPFL +T+ +
Sbjct: 4 LDGIRVLDLSRVLAGPWCTQTLADLGADVIKVERPGSGDDTRGWGPPFLKDAQGRDTQEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+S+ D P GQ ++++LA CDV VENF G + R L + L +N
Sbjct: 64 AYYLGANRNKRSLTCDIAQPAGQALVRELAAHCDVFVENFKVGDMARYGLDWASLRAVNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD---GPPCKVGIASIDLATGL 388
+L+YCSVTGFG GPY++R GYD +GGL+ +TG D G P KVG+A DL TGL
Sbjct: 124 RLVYCSVTGFGQTGPYRERAGYDYAVQGMGGLMSVTGERDDAGGGPQKVGVAVADLFTGL 183
Query: 389 YAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVP 448
YA AV+AAL H +TG+GQ ID LL TQV+ML N+GANYL +G R G +H N+VP
Sbjct: 184 YATVAVLAALRHAERTGEGQHIDMALLDTQVAMLANLGANYLVSGQVPGRAGNAHQNIVP 243
Query: 449 HQVFKT------SNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
+QVF+ S ++ + G+D Q+ C+V LA DPR+
Sbjct: 244 YQVFEVAPATDGSPDHIILAVGNDGQFAKFCEVAGRPELAADPRF 288
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 68/139 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V LA DPR+ RV +R +L +EA + WL + P +N
Sbjct: 273 FCEVAGRPELAADPRFAKNQDRVRHRAVLVPLLEALMKTRPKARWLAELEAAKVPCGAIN 332
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++++VFAD + +V E +H +++V + T PPP LG+HT VL+
Sbjct: 333 NLAEVFADPQVNQRGMVDEWAHPLRPGLRLVASPLKLGATPVRRERPPPLLGQHTGEVLR 392
Query: 121 DLLNYDETTIAKLKEKKIL 139
+LL +D I L++ K++
Sbjct: 393 ELLGWDAARIEALQQGKVI 411
>gi|84502797|ref|ZP_01000910.1| Putative acyl-CoA transferase/carnitine dehydratase [Oceanicola
batsensis HTCC2597]
gi|84388780|gb|EAQ01650.1| Putative acyl-CoA transferase/carnitine dehydratase [Oceanicola
batsensis HTCC2597]
Length = 372
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 133/277 (48%), Positives = 181/277 (65%), Gaps = 3/277 (1%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE--LS 271
+ PL +R+++L RI+AGP+ L+DLGAEVIKVE P GD+ R+WGPPF++ E +
Sbjct: 2 AAPLDGLRVVELARILAGPWAGQTLSDLGAEVIKVESP-EGDDTRRWGPPFIDRDEDHTA 60
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NR K SV DF+TPEGQ+ ++DL + D+L+ENF G L + L Y LSE+N
Sbjct: 61 AYFHSCNRGKTSVAADFRTPEGQETVRDLVRDADILIENFKVGGLKKYGLDYDSLSELNP 120
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+LIYCS+TGFG GPY R GYD I + GL+ +TG PDG P + G+A DL TG+Y+
Sbjct: 121 RLIYCSITGFGQDGPYAHRAGYDYIIQGMSGLMSLTGEPDGQPLRAGVAVTDLFTGVYSA 180
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A++AAL + TG+GQ ID +LL VS+ N NYL+ G R G H N+ P+QV
Sbjct: 181 TAILAALHQRAATGRGQHIDMSLLDCAVSVTANQAMNYLSTGTPPARTGNYHPNLTPYQV 240
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYL 488
F+ S+G++ I TG+D QY +C V+ L + DP YL
Sbjct: 241 FEVSDGFIIIATGNDAQYGRLCDVLGLPGMKDDPDYL 277
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 33/71 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C V+ L + DP YL RV NR + + ++ + T E L + P +N
Sbjct: 261 LCDVLGLPGMKDDPDYLHNPQRVANRPRMIRRLQEACLRFTKAELLAQCEAKGIPAGPIN 320
Query: 61 SISQVFADEHI 71
+++VF D +
Sbjct: 321 DMAEVFEDPQV 331
>gi|345568759|gb|EGX51651.1| hypothetical protein AOL_s00054g50 [Arthrobotrys oligospora ATCC
24927]
Length = 447
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 135/281 (48%), Positives = 187/281 (66%), Gaps = 7/281 (2%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE------ 269
PL+ VR+LDLTR++AGP+CT +L DLGA+VIK+E GD+ R WGPP+ +
Sbjct: 46 PLAGVRVLDLTRVLAGPYCTQILGDLGADVIKIEHVTRGDDTRAWGPPYAPRKDGKSGPG 105
Query: 270 LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEI 329
S YF VNRNK+S+ +DFK EGQ I+K LAK DVLVEN++PG L + L Y+ L
Sbjct: 106 ESAYFLAVNRNKRSLALDFKAAEGQAIVKALAKTSDVLVENYLPGTLAKYGLDYETLRAE 165
Query: 330 NSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLY 389
N LIY S+TG+G GPY DR GYD++ + GL+HITG DG P KVG+A DL TGLY
Sbjct: 166 NKGLIYASITGYGQTGPYSDRAGYDVMVEAEMGLMHITGERDGSPVKVGVAVTDLTTGLY 225
Query: 390 AHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAG-IEGKRWGTSHANVVP 448
A++AALL + T +GQ ID +L QV+ L N+ ++ L +G +G RWGT+H ++VP
Sbjct: 226 TSNAILAALLSRASTSQGQHIDMSLSDCQVATLANIASSVLVSGKRDGGRWGTAHPSIVP 285
Query: 449 HQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
++ F TS+G + +G G+D+ + +CK + A D R++T
Sbjct: 286 YEAFPTSDGSILLGGGNDRLFGILCKRIGYPEWASDERFVT 326
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 1/139 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK + A D R++T RVE R +L I +T K+T+EWL IF+G PYA VN
Sbjct: 309 LCKRIGYPEWASDERFVTNEKRVEYRYILVPMIGEETKNKSTQEWLEIFEGSGMPYAAVN 368
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ +H+ +VKE+ HE G IK+V +S + +R PP LGE T +LK
Sbjct: 369 DVYDTLHHDHVLARGMVKEVHHEACGPIKLVNTPFKFSDAEVSIRHAPPTLGEDTSDILK 428
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ L + I LK + ++
Sbjct: 429 E-LGFTSDQINDLKSEGVV 446
>gi|456063229|ref|YP_007502199.1| Formyl-CoA transferase [beta proteobacterium CB]
gi|455440526|gb|AGG33464.1| Formyl-CoA transferase [beta proteobacterium CB]
Length = 406
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 129/281 (45%), Positives = 187/281 (66%), Gaps = 9/281 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+C LADLGA+VIKVE+P GD+ R WGPPF+ +T +
Sbjct: 4 LSHIRVLDLSRVLAGPWCAQNLADLGADVIKVERPGVGDDTRHWGPPFVKDAQGQDTAET 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF C+NRNK+S+ VD PEGQ+II+ LAK DV++EN+ G L + L Y+ L ++ S
Sbjct: 64 AYFICINRNKRSITVDISKPEGQEIIRQLAKDSDVVIENYKVGDLAKYGLDYESLKKVKS 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
LIYCS+TGFG GPY RPGYD I +GG + +TG P P K G+A D+ TG
Sbjct: 124 DLIYCSITGFGQNGPYAQRPGYDFIIQGMGGFMSVTGEAEDFPGASPQKAGVAIADIFTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA A++AA++H+ KTG+GQ ID LL TQ++++ N+ + YL + +RWG + +V
Sbjct: 184 MYASTAILAAVVHRDKTGQGQYIDMALLDTQIAVMANISSAYLCSDKVPRRWGNASPIIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYL 488
P+Q F TS+G++ + G+D Q++ HLA +P Y+
Sbjct: 244 PYQTFPTSDGWMIVAVGNDGQFKHFVTAGGEAHLATNPLYI 284
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 74/131 (56%)
Query: 9 HLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFAD 68
HLA +P Y+ +RVENR+ L +E T KT EW+ + + + P +N+ +VF +
Sbjct: 276 HLATNPLYINNPIRVENRKSLIPLLEVMTRRKTKAEWISLLEAANVPCGPINNFEEVFDN 335
Query: 69 EHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDET 128
E ++ + + H G +K+V + S T EVR PP LG+HTD +L++ L+ D
Sbjct: 336 EQVKARGVQIHVPHPTAGTMKLVASPMRLSETPVEVRMAPPTLGQHTDEILQERLSLDSN 395
Query: 129 TIAKLKEKKIL 139
IA L+EK I+
Sbjct: 396 AIAALQEKGII 406
>gi|397693349|ref|YP_006531229.1| Formyl-CoA transferase [Pseudomonas putida DOT-T1E]
gi|421523016|ref|ZP_15969649.1| formyl-CoA transferase [Pseudomonas putida LS46]
gi|397330079|gb|AFO46438.1| Formyl-CoA transferase [Pseudomonas putida DOT-T1E]
gi|402753121|gb|EJX13622.1| formyl-CoA transferase [Pseudomonas putida LS46]
Length = 406
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 192/294 (65%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE-----LS 271
LS++R+LDL+R++AGP+ +LADLGA+VIKVE+P +GD+ R WGPPFL + E +
Sbjct: 4 LSHLRVLDLSRVLAGPWSGQILADLGADVIKVERPGSGDDTRSWGPPFLKDAEGEDTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++++LA +CD+++ENF G L L Y+ L IN
Sbjct: 64 AYYLSANRNKRSVTIDFTQPEGQRLVRELAAKCDIVIENFKVGGLAAYGLDYQSLKAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
QLIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 QLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPEGEEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ + G GQ ID LL QV+ L N NYL G +R G +H N+V
Sbjct: 184 LYSTVAMLAALAHRDQAGVGQHIDMALLDVQVACLANQAMNYLTTGSPPRRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR++T L +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDSQFRKFAEVAGQPQWAEDPRFVTNKLRVANRAELI 297
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 67/139 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR++T LRV NR L I T+ KTT EW+ + P +N
Sbjct: 268 FAEVAGQPQWAEDPRFVTNKLRVANRAELIPLIRQATVFKTTAEWVAQLEAAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+++Q+F D + L I H G + V + S T E R PP LGEHT+ VL
Sbjct: 328 NLAQMFQDPQVLARGLALSIPHPLAGSVPQVASPIRLSETPVEYRRAPPLLGEHTEAVLG 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
++L D + +L+ +L
Sbjct: 388 EVLGLDVGEVQRLRGAGVL 406
>gi|85068273|ref|XP_962152.1| hypothetical protein NCU07298 [Neurospora crassa OR74A]
gi|28923749|gb|EAA32916.1| hypothetical protein NCU07298 [Neurospora crassa OR74A]
Length = 444
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 131/283 (46%), Positives = 187/283 (66%), Gaps = 9/283 (3%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPF--------L 265
+LPL R+LD+TR++AGP+CT +L DLGAEVIK+E PV GD+ R WGPP+ +
Sbjct: 38 TLPLEGYRVLDMTRVLAGPYCTQILGDLGAEVIKIEHPVRGDDTRAWGPPYASYKSGSSM 97
Query: 266 NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKH 325
S YF VNRNKKS+ + F+ P G +I++ LA +CD+LVEN++PG L + L Y+
Sbjct: 98 EGPGESAYFLGVNRNKKSLALSFQDPAGVEILQKLAAKCDILVENYIPGSLKKYGLDYET 157
Query: 326 LSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLA 385
L +IN LIY S+TG+G GPY R GYD++ + GL+HITG+ DGPP KVG+A DL
Sbjct: 158 LRQINPALIYASITGYGQTGPYSKRAGYDVMVEAEFGLMHITGNRDGPPVKVGVAVTDLT 217
Query: 386 TGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAG-IEGKRWGTSHA 444
TGLY ++MAALL + KTG+GQ ID L Q + L N+ ++ L +G + RWGT+H
Sbjct: 218 TGLYTSNSIMAALLARAKTGRGQWIDACLSDCQTATLANIASSSLISGKKDSGRWGTAHP 277
Query: 445 NVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
++VP++ F+T +G + G G+D+ + +C + DP+Y
Sbjct: 278 SIVPYKAFETKDGDILFGGGNDRLFGILCDGLGRPEWKDDPKY 320
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 79/139 (56%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + DP+Y A RV NR L EIE T KTT+EWL +F+G PYA +N
Sbjct: 305 LCDGLGRPEWKDDPKYKINAQRVANRVELEAEIEKITKTKTTQEWLDVFEGKGLPYAAIN 364
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I EH +V E+ HE+ G IK+V V YS T P +R+PPP LG+HTD VL+
Sbjct: 365 DILTTLTHEHTLARNMVVEVEHEECGPIKMVNSPVKYSETTPTIRSPPPTLGQHTDEVLR 424
Query: 121 DLLNYDETTIAKLKEKKIL 139
D + + I +L+EK ++
Sbjct: 425 DHVGLSDEQIRQLREKGVV 443
>gi|395495901|ref|ZP_10427480.1| putative CoA-transferase [Pseudomonas sp. PAMC 25886]
Length = 406
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 139/294 (47%), Positives = 190/294 (64%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWAGQILADLGAEVIKVERPGNGDDTRAWGPPFLKDAYGENTTEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ++++DLA + D+L+ENF G L L Y+ L EIN
Sbjct: 64 AYYLSANRNKESVTIDFTRPEGQKLVRDLAAKSDILIENFKVGGLAAYGLDYESLKEINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 ELIYCSITGFGQTGPYAARAGYDFMIQGLGGLMSLTGRPEGEDGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AA+ H+ G GQ ID LL QV+ L N NYL G+ KR G +H N+V
Sbjct: 184 LYSTVAILAAMAHRDHDGGGQHIDMALLDVQVACLANQAMNYLTTGVPPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ T L +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAEVAGHPQWADDPRFATNKLRVANRAALI 297
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 70/139 (50%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ T LRV NR L I T+ KTT EW+ + V P +N
Sbjct: 268 FAEVAGHPQWADDPRFATNKLRVANRAALIPLIRQATVFKTTAEWVAQLERVGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD ++ L E+ H G + V + S T E R+ PP LGEHT VL+
Sbjct: 328 DLAQVFADPQVKARGLAMELPHALAGMVPQVASPMRLSKTPVEYRSAPPLLGEHTHQVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L +++ L++ ++
Sbjct: 388 QVLGLTPASVSALRDAGVI 406
>gi|398856907|ref|ZP_10612619.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM79]
gi|398242081|gb|EJN27709.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM79]
Length = 406
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 139/294 (47%), Positives = 190/294 (64%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWAGQILADLGAEVIKVERPGNGDDTRAWGPPFLKDAYGENTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQQ++++LA + D+L+ENF G L L Y+ L IN
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQQLVRELAAKSDILIENFKVGGLAAYGLDYESLKAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 KLIYCSITGFGQTGPYSKRAGYDFMIQGLGGLMSLTGRPEGDEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ + G GQ ID LL QV+ L N NYL G+ KR G +H N+V
Sbjct: 184 LYSTVAILAALAHRDQGGGGQHIDMALLDVQVACLANQAMNYLTTGVAPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ T L +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAQVAGQPQWADDPRFATNKLRVANRAVLI 297
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 68/139 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ T LRV NR +L I T+ KTT EW+ + P +N
Sbjct: 268 FAQVAGQPQWADDPRFATNKLRVANRAVLIPLIRQVTVFKTTAEWVAQLEQAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++Q+FAD +Q L E+ H G + V + S T E R+ PP LGEHT VL+
Sbjct: 328 DLAQMFADPQVQARGLAIELPHALAGMVPQVASPIRLSETPVEYRSAPPLLGEHTLEVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L D +A K +L
Sbjct: 388 RVLGLDAGVVAGFKASGVL 406
>gi|423015792|ref|ZP_17006513.1| CoA-transferase family III family protein 4 [Achromobacter
xylosoxidans AXX-A]
gi|338781295|gb|EGP45688.1| CoA-transferase family III family protein 4 [Achromobacter
xylosoxidans AXX-A]
Length = 412
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 188/294 (63%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
L VR+LDL+RI+AGP+CT LADLGA+VIK+E+P GD+ R WGPPFL + T+ S
Sbjct: 7 LDGVRVLDLSRILAGPWCTQNLADLGADVIKIERPGVGDDTRAWGPPFLKDGQGVDTDES 66
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV D TP G +I++LA D+LVENF G L + L Y L IN
Sbjct: 67 AYYLSANRNKRSVEADMATPAGAALIRELAAVSDILVENFKVGGLAKYGLDYASLKAINP 126
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+LIYCS+TGFG GP+ RPGYD + +GGL+ ITG P G P K G+A D+ TG
Sbjct: 127 RLIYCSITGFGQDGPFAQRPGYDFMIQGMGGLMSITGERDDLPGGGPQKAGVAVTDIVTG 186
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA A++AAL ++++G GQ +D LL + V++L N +NY N+G+ R G +H NVV
Sbjct: 187 MYATVAILAALQERHRSGLGQHLDIALLDSHVALLANQNSNYFNSGVAPTRAGNAHQNVV 246
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+QVF +G++ + TG++ QY+ C + L DPR+ T L +A L+
Sbjct: 247 PYQVFAARDGHLIVATGNESQYRAYCAAIGAPELGDDPRFATNRLRVANRETLV 300
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 62/131 (47%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C + L DPR+ T LRV NRE L + T + W+ + V P +N
Sbjct: 272 CAAIGAPELGDDPRFATNRLRVANRETLVALLTDIMRTGTRDGWIAKLEAVGVPCGPIND 331
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
I+Q FA Q +L +++ H G + + +S + R PP LG+HT+ VL++
Sbjct: 332 IAQAFAHPQAQARRLRRDMPHPGGGVAPVTASPLRFSDSPVVYRRAPPLLGQHTEEVLRE 391
Query: 122 LLNYDETTIAK 132
+L + IA+
Sbjct: 392 VLGKSPSAIAE 402
>gi|257485735|ref|ZP_05639776.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|422682679|ref|ZP_16740944.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|331012018|gb|EGH92074.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
Length = 406
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 134/294 (45%), Positives = 193/294 (65%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
LS++R+LDL+R++AGP+ +LADLGA+VIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHIRVLDLSRVLAGPWAGQILADLGADVIKVERPGCGDDTRSWGPPFLQDAAGQNTTEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+S+ +DF PEGQ+++++LA + D+++ENF G L L Y+ L +N
Sbjct: 64 AYYLSANRNKQSITIDFTRPEGQKLVRELAAKSDIVIENFKVGGLASYGLDYESLKAVNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY RPGYD + ++GGL+ +TG PDG P KVG+A D+ TG
Sbjct: 124 RLIYCSITGFGQSGPYATRPGYDFMIQALGGLMSLTGLPDGEEGAGPAKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ ++ GQ ID LL QV+ L N NYL G+ +R G +H N+V
Sbjct: 184 LYSTTAILAALAHRDQSNTGQYIDMALLDVQVACLANQAMNYLTTGVVPRRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + + G+D Q++ +V A D R+LT L +A + LI
Sbjct: 244 PYQAFPTADGDLILTVGNDSQFRRFAEVAGQPQWADDSRFLTNKLRVAHRTELI 297
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 68/139 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A D R+LT LRV +R L I T+ KTT +W+ + P VN
Sbjct: 268 FAEVAGQPQWADDSRFLTNKLRVAHRTELIPLIRQATVFKTTAQWVDELEAAGVPCGPVN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD + L E+ H G + V + S T E R PP LGEHT VL+
Sbjct: 328 DLAQVFADPQVMARGLAIEMPHALGGRVPQVASPIRLSETPVEYRRAPPLLGEHTAQVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+LL + +A L++ ++
Sbjct: 388 ELLGLEGEEVAALRKSGVV 406
>gi|260809343|ref|XP_002599465.1| hypothetical protein BRAFLDRAFT_144729 [Branchiostoma floridae]
gi|229284744|gb|EEN55477.1| hypothetical protein BRAFLDRAFT_144729 [Branchiostoma floridae]
Length = 214
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 133/216 (61%), Positives = 167/216 (77%), Gaps = 2/216 (0%)
Query: 236 MLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTCVNRNKKSVCVDFKTPEGQQ 295
M+L DLGAEVIKVE+P TGD+ R WGPPF S YF VNRNKKS+ V+ K P+G +
Sbjct: 1 MVLGDLGAEVIKVERPDTGDDTRSWGPPFCGTE--SAYFLSVNRNKKSIAVNLKDPKGAK 58
Query: 296 IIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDI 355
IIK LA++ DVLVEN++PGKL+ + LGY HL + LI+CS+TG+GS GPY R GYD+
Sbjct: 59 IIKQLAEKSDVLVENYLPGKLEEMGLGYHHLRQHAPHLIHCSITGYGSDGPYAKRGGYDV 118
Query: 356 IAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLL 415
IAA++GGLLHITG DG P +VG+A DLATGL AHGA+MAALL +++TG GQ IDCNLL
Sbjct: 119 IAAAMGGLLHITGPEDGDPVRVGVAMTDLATGLMAHGAIMAALLQRHRTGVGQHIDCNLL 178
Query: 416 STQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
STQV+ + ++ ANYL AG E +RWGT H ++VP+QV
Sbjct: 179 STQVACISHIAANYLMAGQEARRWGTGHESIVPYQV 214
>gi|119186953|ref|XP_001244083.1| hypothetical protein CIMG_03524 [Coccidioides immitis RS]
gi|392870802|gb|EAS32635.2| CAIB/BAIF family enzyme [Coccidioides immitis RS]
Length = 444
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/309 (45%), Positives = 199/309 (64%), Gaps = 13/309 (4%)
Query: 197 LYENFYSLDLALSSENP-----SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQP 251
++ + SL L S P +LPL+ +R++D+TR++AGP+CT +L DLGAEVIK+E P
Sbjct: 18 VWNDGVSLVLRRSYSTPVHSADTLPLAGIRVVDMTRVLAGPYCTQILGDLGAEVIKIEHP 77
Query: 252 VTGDECRKWGPPFLNNTE-------LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQC 304
V GD+ R WGPPF E S Y+ VNRNKKS+ + F +G +I+ L K
Sbjct: 78 VRGDDTRAWGPPFAKYKEGTKDGPGESAYYLAVNRNKKSLGLSFAHKQGTEILHKLIKDA 137
Query: 305 DVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLL 364
DVLVEN++PG L + L Y+ LS +N +LIY S+TG+G GPY R GYD++ + GL+
Sbjct: 138 DVLVENYIPGSLKKYKLDYETLSALNPRLIYASITGYGQTGPYSKRAGYDVMVEAEMGLM 197
Query: 365 HITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLIN 424
HITG DGPP KVG+A DL TGLY A+MAALL + KTG+GQ ID L QV+ L N
Sbjct: 198 HITGERDGPPVKVGVAVTDLTTGLYTSNAIMAALLARMKTGRGQHIDSALSDCQVATLSN 257
Query: 425 VGANYLNAGI-EGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLAL 483
+ ++ L +G + RWGT+H ++VP++ +KT +G + +G G+DK + +C+ + A
Sbjct: 258 LASSALISGQKDSGRWGTAHPSIVPYRGYKTKDGDILLGGGNDKLFGILCERLGHPEWAT 317
Query: 484 DPRYLTGAL 492
D R++T L
Sbjct: 318 DSRFVTNDL 326
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 81/139 (58%), Gaps = 1/139 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + A D R++T LRV+NRE + + IE +KTT+EWL IF+G PY+ VN
Sbjct: 306 LCERLGHPEWATDSRFVTNDLRVKNREAIDRLIEEIVKQKTTQEWLEIFEGSGMPYSAVN 365
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I H++ +V+E+ H G +K+V V YS P +RTPPP LG+HTD VL+
Sbjct: 366 DIQGTLNHAHVRARGMVQEVEHPICGPMKLVNTPVKYSHATPGIRTPPPTLGQHTDEVLQ 425
Query: 121 DLLNYDETTIAKLKEKKIL 139
D L + I +L+ ++
Sbjct: 426 D-LGFGTDNIDQLRRDGVV 443
>gi|302381579|ref|YP_003817402.1| L-carnitine dehydratase/bile acid-inducible protein F
[Brevundimonas subvibrioides ATCC 15264]
gi|302192207|gb|ADK99778.1| L-carnitine dehydratase/bile acid-inducible protein F
[Brevundimonas subvibrioides ATCC 15264]
Length = 396
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 142/297 (47%), Positives = 185/297 (62%), Gaps = 12/297 (4%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELS----T 272
L+ VR+LDL+R++AGP+ T LLADLGAEVIK+E+P GD+ R WGPPF T+ S
Sbjct: 5 LAGVRVLDLSRVLAGPWATQLLADLGAEVIKIERPGVGDDTRAWGPPFTTRTDGSRGDSA 64
Query: 273 YFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQ 332
YF C NR KKSV +D +PEG I+ LA CDV+VENF G L + L Y LS +
Sbjct: 65 YFMCANRGKKSVELDMASPEGVDTIRRLAATCDVVVENFKVGGLAKYGLDYASLSRDRPK 124
Query: 333 ----LIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPP----CKVGIASIDL 384
L+YCS+TGFG GP + GYD + ++GGL+ +TG PDG P KVG+A +DL
Sbjct: 125 DRPALVYCSITGFGQTGPRASQAGYDYMIQAMGGLMSVTGQPDGSPGAEPMKVGVAVVDL 184
Query: 385 ATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHA 444
ATGLYA A++AALLH TG+GQ ID L Q +ML N NY +G R G +H
Sbjct: 185 ATGLYASNAILAALLHARATGQGQHIDIALFDVQAAMLANQATNYFVSGTAPTRMGNAHP 244
Query: 445 NVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
N+VP+Q F ++G V I G+D Q++ +C V+ LA D RY T A +A L+
Sbjct: 245 NLVPYQPFPCTDGMVVIAVGNDGQFRTLCAVLGADTLAGDDRYATNAGRIAHRVDLV 301
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 1/123 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C V+ LA D RY T A R+ +R L + A T + T + + P VN
Sbjct: 272 LCAVLGADTLAGDDRYATNAGRIAHRVDLVAALSALTRDLTMGALMAKLEPAGVPCGPVN 331
Query: 61 SISQVFADEHIQDIKL-VKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVL 119
++ QVF + + L +++ + ++ V + S T PPALG TD VL
Sbjct: 332 TLDQVFDEPQAKHRGLEIEQSRADLSAPVRTVASPIRMSATPVRYAAAPPALGADTDEVL 391
Query: 120 KDL 122
+
Sbjct: 392 ASI 394
>gi|409396987|ref|ZP_11247930.1| putative lipid metabolism-related protein [Pseudomonas sp. Chol1]
gi|409118489|gb|EKM94888.1| putative lipid metabolism-related protein [Pseudomonas sp. Chol1]
Length = 407
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 140/294 (47%), Positives = 188/294 (63%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+C +L DLGAEVIKVE+P TGD+ R WGPP+L NT +
Sbjct: 5 LSHLRVLDLSRVLAGPWCGQILGDLGAEVIKVERPGTGDDTRHWGPPYLKDQHGENTSEA 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+S+ VDF PEGQ+II++L Q DVL+ENF G L L Y LS IN
Sbjct: 65 AYYLTANRNKQSLTVDFTQPEGQRIIRELVMQSDVLLENFKVGGLAAYGLDYASLSAINP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG D P KVG+A D+ TG
Sbjct: 125 RLIYCSITGFGQDGPYATRAGYDFMIQGLGGLMSLTGRSDAEEGAGPVKVGVALTDILTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA V+AAL H+ +TG+GQ +D LL QV+ L N NYL G+ KR G +H N+V
Sbjct: 185 LYATVGVLAALAHRERTGEGQHVDTALLDVQVACLGNQALNYLTTGVAPKRMGNAHPNIV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ C+V DPR+ + +A + LI
Sbjct: 245 PYQDFPTADGDFILTVGNDGQFRKFCEVAGRPEWTDDPRFASNRARVAHRAELI 298
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 66/139 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V DPR+ + RV +R L I T+ +TT EW+ + P +N
Sbjct: 269 FCEVAGRPEWTDDPRFASNRARVAHRAELIPLIRQVTVFRTTAEWVGALEQAGVPCGPIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD +Q L E+SH G + V + S + R PPP LGEH+ +L+
Sbjct: 329 DLAQVFADPQVQHRGLKVEMSHPLAGRVPQVASPLRLSASPVSYRRPPPLLGEHSAALLE 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
LL I L++ ++
Sbjct: 389 RLLQLQPAQIGALRDAGVI 407
>gi|374293856|ref|YP_005040879.1| putative L-carnitine dehydrogenase [Azospirillum lipoferum 4B]
gi|357427259|emb|CBS90202.1| putative L-carnitine dehydrogenase [Azospirillum lipoferum 4B]
Length = 400
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 133/290 (45%), Positives = 187/290 (64%), Gaps = 6/290 (2%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PLS++R+L+L+R++AGP+ LADLGA+VIKVE+P GD+ R WGPP+ + S YF
Sbjct: 4 PLSHIRVLELSRVLAGPWSAQTLADLGADVIKVERPGAGDDTRAWGPPWAGDQ--SAYFL 61
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
NR K+S+ +DF+ PEGQ++++ LA Q DV++ENF G L + L Y L +N +L+Y
Sbjct: 62 STNRGKRSITIDFERPEGQELVRKLAAQADVVIENFKVGGLVKYGLDYDSLKAVNPRLVY 121
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATGLYAH 391
CS+TGFG GPY++R GYD + +GGL+ ITG PDG P KVG+A D+ TGLYA
Sbjct: 122 CSITGFGQTGPYRNRAGYDFMIQGMGGLMSITGQPDGEPGGGPVKVGVAVTDIFTGLYAT 181
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
+M AL H+ +TG+GQ++D LL QV++L N N L G +R G +H N+VP+Q
Sbjct: 182 IGIMGALAHRDRTGEGQQVDLALLDVQVAVLANQAMNCLVGGKAPQRLGNAHPNIVPYQA 241
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
F T +GY+ + G+D Q+ C V LA D RY T +A L+
Sbjct: 242 FATRDGYIILAVGNDGQFAKFCTVAGQPELAKDERYATNPARVANRKELV 291
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 67/139 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C V LA D RY T RV NR+ L +E + + +WL + V P +N
Sbjct: 262 FCTVAGQPELAKDERYATNPARVANRKELVALLEELIRTRDSHDWLAALEEVGVPCGPIN 321
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ VF D ++ + +++ H G + V + YS T T PP LG+HTD VL
Sbjct: 322 DLTAVFEDPQVKARNIHQDLPHPTQGSVPTVASPIRYSGTPLVHDTAPPTLGQHTDTVLA 381
Query: 121 DLLNYDETTIAKLKEKKIL 139
D L E IA L+EK ++
Sbjct: 382 DQLGLSEADIASLREKGVI 400
>gi|148545435|ref|YP_001265537.1| formyl-CoA transferase [Pseudomonas putida F1]
gi|395446493|ref|YP_006386746.1| Formyl-CoA transferase [Pseudomonas putida ND6]
gi|148509493|gb|ABQ76353.1| Formyl-CoA transferase [Pseudomonas putida F1]
gi|388560490|gb|AFK69631.1| Formyl-CoA transferase [Pseudomonas putida ND6]
Length = 406
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 135/294 (45%), Positives = 192/294 (65%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE-----LS 271
LS++R+LDL+R++AGP+ +LADLGA+VIKVE+P +GD+ R WGPPFL + E +
Sbjct: 4 LSHLRVLDLSRVLAGPWSGQILADLGADVIKVERPGSGDDTRSWGPPFLKDVEGEDTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++++LA +CD+++ENF G L L Y+ L +N
Sbjct: 64 AYYLSANRNKRSVTIDFTQPEGQRLVRELAAKCDIVIENFKVGGLAAYGLDYQSLKAVNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
QLIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 QLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPEGEEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ + G GQ ID LL QV+ L N NYL G +R G +H N+V
Sbjct: 184 LYSTVAMLAALAHRDQAGVGQHIDMALLDVQVACLANQAMNYLTTGSPPRRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR++T L +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDSQFRKFAEVAGQPQWAEDPRFITNKLRVANRAELI 297
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 67/139 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR++T LRV NR L I T+ KTT EW+ + P +N
Sbjct: 268 FAEVAGQPQWAEDPRFITNKLRVANRAELIPLIRQATVFKTTAEWVAQLEAAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+++Q+F D + L I H G + V + S T E R PP LGEHT+ VL
Sbjct: 328 NLAQMFQDPQVLARGLALNIPHPLAGSVPQVASPIRLSETPVEYRRAPPLLGEHTEAVLG 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
++L D + +L+ +L
Sbjct: 388 EVLGLDVGEVQRLRGAGVL 406
>gi|452966551|gb|EME71561.1| acyl-CoA transferase/carnitine dehydratase [Magnetospirillum sp.
SO-1]
Length = 403
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 131/279 (46%), Positives = 184/279 (65%), Gaps = 5/279 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTEL 270
PLS++R+LDL+R++AGP+ + LLAD+GAEVIKVE+P GD+ R WGPPFL N+T
Sbjct: 4 PLSHLRVLDLSRVLAGPWASQLLADMGAEVIKVERPGEGDDTRGWGPPFLKDGEGNDTGE 63
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
+ YF NR K+SV +DF PEGQ +++ LA + DV++ENF G L + L Y L +
Sbjct: 64 AAYFLSANRGKRSVSIDFTCPEGQALVRRLAARSDVVLENFKVGGLAKYGLDYPALKAVK 123
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYA 390
L+YCS+TGFG GPY R GYD + +GGL+ +TG +G P KVG+A D+ TG+YA
Sbjct: 124 PDLVYCSITGFGQDGPYAGRAGYDFLIQGMGGLMSLTGEAEGQPMKVGVALTDIFTGMYA 183
Query: 391 HGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQ 450
AV+AAL + +TG+G ID LL QV++L N ANYL G +R G +H N+VP+Q
Sbjct: 184 GFAVLAALARRDRTGEGGHIDLALLDVQVAVLANQAANYLVGGTVPRRLGNAHPNIVPYQ 243
Query: 451 VFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
F T++G++ + G+D Q++ C+ L +PRY T
Sbjct: 244 AFATADGHIILAVGNDGQFRRFCETAGRPDLGSNPRYAT 282
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 60/139 (43%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+ L +PRY T RV NR L +EA +++ EW+ + P +N
Sbjct: 265 FCETAGRPDLGSNPRYATNVERVRNRAELVPTLEALLAARSSAEWIAALETAGVPCGPIN 324
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ VFAD + L + H G I +V + Q PP LG T VL
Sbjct: 325 DLAGVFADPQVIHRGLRTRLDHPLAGGIDLVANPIRLDGAQAVSGRAPPLLGADTAEVLA 384
Query: 121 DLLNYDETTIAKLKEKKIL 139
DLL D +A+LK ++
Sbjct: 385 DLLGLDAAEMARLKAAGVV 403
>gi|398899972|ref|ZP_10649254.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM50]
gi|398181882|gb|EJM69426.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM50]
Length = 406
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 139/294 (47%), Positives = 190/294 (64%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWAGQILADLGAEVIKVERPGNGDDTRAWGPPFLKDAYGENTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQQ++++LA + D+L+ENF G L L Y+ L IN
Sbjct: 64 AYYLAANRNKQSVTIDFTRPEGQQLVRELAAKSDILIENFKVGGLAAYGLDYESLKAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 KLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPEGDEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ + G GQ ID LL QV+ L N NYL G+ KR G +H N+V
Sbjct: 184 LYSTVAILAALAHRDQGGGGQHIDMALLDVQVACLANQAMNYLTTGVAPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ T L +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAQVAGQPQWADDPRFSTNKLRVANRAVLI 297
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 68/139 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ T LRV NR +L I T+ KTT EW+ + P +N
Sbjct: 268 FAQVAGQPQWADDPRFSTNKLRVANRAVLIPLIRQATVFKTTAEWVAQLEQAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++Q+FAD +Q L E+ H G + V + S T E R+ PP LGEHT VL+
Sbjct: 328 DLAQMFADPQVQARGLAIELPHALAGVVPQVASPIRLSETPVEYRSAPPLLGEHTLEVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L D +A K +L
Sbjct: 388 RVLGLDAGVVAGFKASGVL 406
>gi|373858535|ref|ZP_09601271.1| Formyl-CoA transferase [Bacillus sp. 1NLA3E]
gi|372451675|gb|EHP25150.1| Formyl-CoA transferase [Bacillus sp. 1NLA3E]
Length = 396
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 128/275 (46%), Positives = 189/275 (68%), Gaps = 2/275 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L+ +++LDLTR++AGP+CTM+LADLGA+V+KVE P DE R WGPPF N +S Y+ C
Sbjct: 6 LAGIKVLDLTRVLAGPYCTMMLADLGADVMKVEAPGGSDETRGWGPPFKNG--VSAYYLC 63
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
NRNK+S+ V+ KT EG+ II+ LAK DVL+ NF G +++ L Y+ L E+NS L++C
Sbjct: 64 ANRNKRSITVNLKTEEGRDIIRTLAKDADVLIHNFKTGSMEKWLLDYESLQELNSGLVFC 123
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S+TGFG GPY PGYD I + GL+ ITG + P K+G+A +D+ TGLYA ++ A
Sbjct: 124 SITGFGETGPYSQLPGYDFIVQGMSGLMSITGTEESGPLKIGVAMVDILTGLYAAISIQA 183
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
ALL + K+G GQKID +LL V L NV +NYL +G ++ G H N+VP+ F+T++
Sbjct: 184 ALLERVKSGLGQKIDMSLLDAAVGSLANVASNYLISGKVPQKLGNEHPNIVPYATFQTAD 243
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
G + I G+D+Q+ +C+++ ++ +A ++ T +
Sbjct: 244 GEMIIAVGNDRQFTTLCELLEMKAIAQHEKFRTNS 278
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 73/139 (52%), Gaps = 1/139 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+++ ++ +A ++ T + RV+NR L + + ++ E W +F + P +N
Sbjct: 259 LCELLEMKAIAQHEKFRTNSARVQNRLELTSILNERLQSQSMEYWTSLFSAYNIPCGPIN 318
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ +VF I+ ++V E++H + G + +VG + S T+ + PP GEHT +++
Sbjct: 319 TMDRVFNHPQIKARQMVVEMNHPEAGVVNLVGSPLKLSRTKVRMERHPPVAGEHTIEIMQ 378
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ +T I + K I+
Sbjct: 379 Q-AGFLQTEINQFKNNNII 396
>gi|422647824|ref|ZP_16710950.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
syringae pv. maculicola str. ES4326]
gi|330961364|gb|EGH61624.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
syringae pv. maculicola str. ES4326]
Length = 406
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 192/294 (65%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGA+VIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHIRVLDLSRVLAGPWAGQILADLGADVIKVERPGCGDDTRSWGPPFLRDAAGQNTTEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ++++DLA + D+++ENF G L L Y L IN
Sbjct: 64 AYYLSANRNKQSVTIDFTHPEGQKLVRDLAAKSDIVIENFKVGGLAAYGLDYPSLKAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY RPGYD + ++GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 RLIYCSITGFGQSGPYAKRPGYDFMIQALGGLMSLTGLPEGEEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ ++G GQ ID LL QV+ L N NYL G+ R G +H N+V
Sbjct: 184 LYSTTAILAALAHRDQSGVGQCIDMALLDVQVACLANQAMNYLTTGVSPGRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + + G+D+Q++ V A DPR+LT +A + LI
Sbjct: 244 PYQSFPTADGDLILTIGNDRQFRKFADVAGQSQWADDPRFLTNNQRVAHRAELI 297
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 65/139 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
V A DPR+LT RV +R L I T+ + T +W+ + P VN
Sbjct: 268 FADVAGQSQWADDPRFLTNNQRVAHRAELIPLIRQVTVFRNTAQWVSDLEAAGVPCGPVN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD + L E+ H G + V + S T E R PPP LGEHT VL+
Sbjct: 328 DLAQVFADPQVVARGLAIELPHALGGSVPQVASPIRLSETPVEYRWPPPLLGEHTAQVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+LL +A L + +L
Sbjct: 388 ELLGLSSEEVALLSAEGVL 406
>gi|389817358|ref|ZP_10208085.1| CAIB/BAIF family protein [Planococcus antarcticus DSM 14505]
gi|388464674|gb|EIM07003.1| CAIB/BAIF family protein [Planococcus antarcticus DSM 14505]
Length = 382
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 135/276 (48%), Positives = 187/276 (67%), Gaps = 2/276 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L+ ++ILDL+R++AGP+CTM+L DLGAEVIKVE DE RKWGPPF N +S Y+
Sbjct: 5 LTGMKILDLSRVLAGPYCTMILGDLGAEVIKVEAHGGSDETRKWGPPFQNG--VSAYYLS 62
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
+NRNKK++ VD KT EG +IK L + DV+V NF G ++RL LGY+ LS IN +++C
Sbjct: 63 INRNKKAITVDLKTAEGVAVIKKLVAESDVVVSNFKTGTMERLGLGYETLSRINPAIVFC 122
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S+TGFG GP +D PGYD I ++ GL+ ITG+ + P K G+A +D+ TGLYA + A
Sbjct: 123 SITGFGETGPDRDMPGYDFIIQAMSGLMSITGNKESGPQKSGVAIVDVLTGLYACIGIQA 182
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
ALL + +GKGQK+D +L T VS L+N+ +NYL G +HAN+VP+Q F+T++
Sbjct: 183 ALLERVCSGKGQKLDISLYDTAVSALVNIASNYLMNEKVPNALGNAHANIVPYQTFRTAD 242
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
G + I G+D+Q+Q +C V+ A D RY T L
Sbjct: 243 GEMVIAVGTDQQFQALCIVLEKPQFAEDERYRTNPL 278
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C V+ A D RY T LRVENRE L ++ + + T W + + + P +
Sbjct: 258 LCIVLEKPQFAEDERYRTNPLRVENRESLVPLLQQIFLTEKTGYWQTLCRKNNIPGGPIQ 317
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVL 119
+I ++ D+ +Q + E H G IK++G + S T ++ PP GEH +L
Sbjct: 318 TIQEMGHDQQLQARDMFIEQDHPTAGKIKMIGSPLKLSRTPVKMERHPPNPGEHNKEIL 376
>gi|425746967|ref|ZP_18864987.1| CoA-transferase family III protein [Acinetobacter baumannii WC-323]
gi|425484394|gb|EKU50798.1| CoA-transferase family III protein [Acinetobacter baumannii WC-323]
Length = 405
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 135/280 (48%), Positives = 189/280 (67%), Gaps = 9/280 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ +R+LDL+R++AGP+C +LADLGAEVIKVE+P GD+ R WGPP++ +T+ +
Sbjct: 4 LNGIRVLDLSRVLAGPWCGQILADLGAEVIKVERPKLGDDTRSWGPPWMKDNSGQDTQEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK SV +D +PEGQ++IK L + DV++EN+ G L + L Y LS IN
Sbjct: 64 AYYQSTNRNKLSVAIDIASPEGQELIKALIQDSDVVIENYKAGSLKKYGLDYAALSAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCS+TGFG GP + PGYD I +GGL+ ITG P G P KVG+A DLATG
Sbjct: 124 GLVYCSITGFGQNGPRAEEPGYDFIIQGMGGLMSITGEKDDLPGGGPQKVGVAFSDLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL++++TG GQ ID LL Q++ + N G NYL++G KR+G +HAN+V
Sbjct: 184 LYSTIAIQAALLNRHETGLGQYIDMALLDVQIATMANQGMNYLSSGNIPKRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
P+QVFK ++ I G+D Q+ +C + L +L DPR+
Sbjct: 244 PYQVFKAADREFIIACGNDTQFIQLCSSIGLANLPNDPRF 283
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 74/140 (52%), Gaps = 2/140 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L +L DPR+ A R+ RE + + + K+ ++W+ P +N
Sbjct: 268 LCSSIGLANLPNDPRFRRNADRIRYREEIIGILSKHFLSKSADDWVAAIHAAKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q F + +Q +++ E+ H + + ++G + S T E +T PP LG+HTD +L
Sbjct: 328 NLEQAFQEPQVQAREMLVEMQHPQCEKLTVIGSPIKLSRTPVEYKTAPPLLGQHTDTILS 387
Query: 121 DLLNYDETTIAKLKEKKILG 140
+L+ ++ + +LK K I+G
Sbjct: 388 RILSPEK--LQQLKLKGIVG 405
>gi|28872566|ref|NP_795185.1| CAIB/BAIF family protein [Pseudomonas syringae pv. tomato str.
DC3000]
gi|28855821|gb|AAO58880.1| CAIB/BAIF family protein [Pseudomonas syringae pv. tomato str.
DC3000]
Length = 406
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 193/294 (65%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGA+VIKVE+P GD+ R WGPPFL +NT +
Sbjct: 4 LSHIRVLDLSRVLAGPWAGQILADLGADVIKVERPGCGDDTRAWGPPFLKDAAGHNTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++++LA + D+++ENF G L L Y L IN
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQKLVRELAAKSDIVIENFKVGGLAAHGLDYASLKAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY RPGYD + ++GGL+ +TG P G P KVG+A D+ TG
Sbjct: 124 RLIYCSITGFGQSGPYATRPGYDFMIQALGGLMSLTGLPGGEEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ ++ GQ ID LL QV+ L N NYL G+ +R G +H N+V
Sbjct: 184 LYSTTAILAALAHRDQSDVGQHIDMALLDVQVACLANQAMNYLTTGVAPERLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + + G+D Q++ +V A DPR+LT L +A + LI
Sbjct: 244 PYQSFPTADGDLILTVGNDSQFRKFAEVAGQSQWADDPRFLTNTLRVAHRAELI 297
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 69/139 (49%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+LT LRV +R L I T+ K T +W+ + + V P A VN
Sbjct: 268 FAEVAGQSQWADDPRFLTNTLRVAHRAELIPLIRQVTVFKATAQWVAVLEAVGVPCAPVN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+++VFAD + L E+ H G + V + S T E R PP LGEHT VL+
Sbjct: 328 DLAKVFADPQVVARGLAIELPHALGGKVPQVASPIRLSETPVEYRRAPPMLGEHTAVVLE 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+LL +A L+ +L
Sbjct: 388 ELLGLGGDEVASLRAAGVL 406
>gi|316931976|ref|YP_004106958.1| L-carnitine dehydratase/bile acid-inducible protein F
[Rhodopseudomonas palustris DX-1]
gi|414171490|ref|ZP_11426401.1| hypothetical protein HMPREF9695_00047 [Afipia broomeae ATCC 49717]
gi|315599690|gb|ADU42225.1| L-carnitine dehydratase/bile acid-inducible protein F
[Rhodopseudomonas palustris DX-1]
gi|410893165|gb|EKS40955.1| hypothetical protein HMPREF9695_00047 [Afipia broomeae ATCC 49717]
Length = 415
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 137/303 (45%), Positives = 193/303 (63%), Gaps = 17/303 (5%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTEL 270
PL+ R+LDL+RI+AGP+ LL+DLGAEV K+E+P TGD+ R+WGPPFL +T
Sbjct: 4 PLAGYRVLDLSRILAGPWLAQLLSDLGAEVWKIERPGTGDDTRQWGPPFLRKDGGIDTTE 63
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
S YF NR K S+CVD T EG I++ LA+Q D+++EN+ G + R L Y+ L +
Sbjct: 64 SAYFLSANRGKHSICVDISTDEGSAIVRALAQQADLVIENYKVGDMARYGLDYEALKRVK 123
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLAT 386
+IYCS+TG+G GP KD GYD+ +IGGL+ ITG P G P KVG+ +D+ T
Sbjct: 124 PDIIYCSITGYGQTGPMKDVAGYDMAIQAIGGLMSITGESDDKPGGGPQKVGVPIVDILT 183
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANV 446
G+Y+ V++ALLH+ +TG+GQ ID LL QV++L N N+L G KR+G +H N+
Sbjct: 184 GMYSAAGVISALLHRERTGEGQHIDMALLDVQVAVLANQNLNFLTTGTPPKRFGNAHPNI 243
Query: 447 VPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA--------LILAMTS 498
VP+QVF+TS+G + G+D+Q++ C L LA D R++T LI + +
Sbjct: 244 VPYQVFRTSDGSFVLAVGNDQQFRKFCAATGLSGLATDSRFVTNTDRLKNRDQLIPLLDA 303
Query: 499 HLI 501
HLI
Sbjct: 304 HLI 306
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 71/139 (51%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C L LA D R++T R++NR+ L ++A +++TT+ W+ I + V P A +N
Sbjct: 269 FCAATGLSGLATDSRFVTNTDRLKNRDQLIPLLDAHLIQQTTQHWISILEPVGVPCAPIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ QVFA + ++ + H +V + +S T+ E PP GE T +LK
Sbjct: 329 RLDQVFAHPQVIHREMQVNLPHSSGTTAPLVANPIKFSGTKIEYAKGPPRRGEDTANILK 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L YD I L E++I+
Sbjct: 389 SILKYDSAAIQDLSERRII 407
>gi|336471498|gb|EGO59659.1| hypothetical protein NEUTE1DRAFT_61271 [Neurospora tetrasperma FGSC
2508]
gi|350292599|gb|EGZ73794.1| CoA-transferase family III [Neurospora tetrasperma FGSC 2509]
Length = 444
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 131/283 (46%), Positives = 187/283 (66%), Gaps = 9/283 (3%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPF--------L 265
+LPL R+LD+TR++AGP+CT +L DLGAEVIK+E PV GD+ R WGPP+ +
Sbjct: 38 TLPLEGYRVLDMTRVLAGPYCTQILGDLGAEVIKIEHPVRGDDTRAWGPPYASYKSGSSM 97
Query: 266 NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKH 325
S YF VNRNKKS+ + F+ P G +I++ LA +CD+LVEN++PG L + L Y+
Sbjct: 98 EGPGESAYFLGVNRNKKSLALSFQDPAGVEILQKLAAKCDILVENYIPGSLKKYGLDYET 157
Query: 326 LSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLA 385
L +IN LIY S+TG+G GPY R GYD++ + GL+HITG+ DGPP KVG+A DL
Sbjct: 158 LRQINPALIYASITGYGQTGPYSKRAGYDVMVEAEFGLMHITGNRDGPPVKVGVAVTDLT 217
Query: 386 TGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAG-IEGKRWGTSHA 444
TGLY ++MAALL + KTG+GQ ID L Q + L N+ ++ L +G + RWGT+H
Sbjct: 218 TGLYTSNSIMAALLARAKTGRGQWIDACLSDCQTATLANIASSSLISGKKDSGRWGTAHP 277
Query: 445 NVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
++VP++ F+T +G + G G+D+ + +C + DP+Y
Sbjct: 278 SIVPYKAFETKDGDILFGGGNDRLFGILCDGLGRPEWKDDPKY 320
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 79/139 (56%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + DP+Y A RV NR L EIE T KTT+EWL +F+G PYA +N
Sbjct: 305 LCDGLGRPEWKDDPKYKINAQRVANRVELEAEIEKITKTKTTQEWLDVFEGKGLPYAAIN 364
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I EH +V E+ HE+ G IK+V V YS T P +R+PPP LG+HTD VL+
Sbjct: 365 DILTTLTHEHTLARNMVVEVEHEECGPIKMVNSPVKYSETTPTIRSPPPTLGQHTDEVLR 424
Query: 121 DLLNYDETTIAKLKEKKIL 139
D + + I +L+EK ++
Sbjct: 425 DHVGLSDEQIRQLREKGVV 443
>gi|449296585|gb|EMC92604.1| hypothetical protein BAUCODRAFT_77579 [Baudoinia compniacensis UAMH
10762]
Length = 396
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 131/276 (47%), Positives = 189/276 (68%), Gaps = 9/276 (3%)
Query: 225 LTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELS--------TYFTC 276
+TR++AGP+CT +L DLGAE+IK+E P GD+ R WGPP+ + TE S YF
Sbjct: 1 MTRVLAGPYCTQILGDLGAEIIKIEHPTRGDDTRAWGPPYASYTEQSGKQGSGESAYFLA 60
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
VNRNKKS+ + F+ G +I+ LAK CDVLVEN++PG L + + Y+ ++++N LIY
Sbjct: 61 VNRNKKSLGLSFQHKSGVKILHKLAKDCDVLVENYLPGALKKYGMDYQSVAKVNPGLIYA 120
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S+TG+G GPY +R GYD++ + GL+HITGH DGPP KVG+A DL TGLY +VMA
Sbjct: 121 SITGYGQTGPYSNRAGYDVMVEAEMGLMHITGHRDGPPAKVGVAITDLTTGLYTSNSVMA 180
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAG-IEGKRWGTSHANVVPHQVFKTS 455
ALL + KTG+GQ +D +L Q++ L N+ ++ L +G + RWGT+H ++VP++ FKTS
Sbjct: 181 ALLARAKTGRGQHLDVSLADCQIASLANIASSCLISGKPDSGRWGTAHPSIVPYKGFKTS 240
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
+G + +G G+D+ Y MC+ + + DPR+LT A
Sbjct: 241 DGDIMLGGGNDRLYGVMCERLGKKEWISDPRFLTNA 276
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 83/139 (59%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
MC+ + + DPR+LT A RV+NR+ L + +E T KTT+EWL + +G PYA +N
Sbjct: 257 MCERLGKKEWISDPRFLTNADRVKNRDELERLVEEVTSTKTTQEWLEVLEGSGMPYAAIN 316
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ EH + +V EI H G +K++ P V +S + P +RTPPP LG+HT+ +L
Sbjct: 317 DVKATLEHEHTKARNMVTEIDHPSCGPVKLLSPPVKFSDSTPSIRTPPPTLGQHTEEILG 376
Query: 121 DLLNYDETTIAKLKEKKIL 139
++L + + +L+ + ++
Sbjct: 377 EMLGMSGSEVERLRSEGVV 395
>gi|422596592|ref|ZP_16670872.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
syringae pv. lachrymans str. M301315]
gi|330986889|gb|EGH84992.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
syringae pv. lachrymans str. M301315]
Length = 406
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 134/294 (45%), Positives = 193/294 (65%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
LS++R+LDL+R++AGP+ +LADLGA+VIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHIRVLDLSRVLAGPWAGQILADLGADVIKVERPGCGDDTRSWGPPFLQDAAGQNTTEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+S+ +DF PEGQ+++++LA + D+++ENF G L L Y+ L +N
Sbjct: 64 AYYLSANRNKQSITIDFTRPEGQKLVRELAAKSDIVIENFKVGGLAPYGLDYESLKAVNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY RPGYD + ++GGL+ +TG PDG P KVG+A D+ TG
Sbjct: 124 RLIYCSITGFGQSGPYATRPGYDFMIQALGGLMSLTGLPDGEEGAGPAKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ ++ GQ ID LL QV+ L N NYL G+ +R G +H N+V
Sbjct: 184 LYSTTAILAALAHRDQSNTGQYIDMALLDVQVACLANQAMNYLTTGVVPRRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + + G+D Q++ +V A D R+LT L +A + LI
Sbjct: 244 PYQAFPTADGDLILTVGNDSQFRRFAEVAGQPQWADDSRFLTNKLRVAHRTELI 297
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 68/139 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A D R+LT LRV +R L I T+ KTT +W+ + P VN
Sbjct: 268 FAEVAGQPQWADDSRFLTNKLRVAHRTELIPLIRQATVFKTTAQWVDELEAAGVPCGPVN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD + L E+ H G + V + S T E R PP LGEHT VL+
Sbjct: 328 DLAQVFADPQVMARGLAIEMPHALGGRVPQVASPIRLSETPVEYRRAPPLLGEHTAQVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+LL + +A L++ ++
Sbjct: 388 ELLGLEGEEVAALRKSGVV 406
>gi|312113484|ref|YP_004011080.1| L-carnitine dehydratase/bile acid-inducible protein F
[Rhodomicrobium vannielii ATCC 17100]
gi|311218613|gb|ADP69981.1| L-carnitine dehydratase/bile acid-inducible protein F
[Rhodomicrobium vannielii ATCC 17100]
Length = 423
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 126/279 (45%), Positives = 182/279 (65%), Gaps = 5/279 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TEL 270
PL+++R+LDL+R++AGP+ + LLADLGA V K+E+PV GD+ R+WGPPFL + T
Sbjct: 24 PLAHLRVLDLSRVLAGPWASQLLADLGATVFKIEKPVEGDDTRRWGPPFLKDASGADTSE 83
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
S Y+ NR K+SV +D PEG +++ LA CDV +ENF G L + L Y + +
Sbjct: 84 SAYYLAANRGKRSVAIDIAKPEGSALVRHLAATCDVFLENFKVGGLAKYGLDYAAIRAVK 143
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYA 390
+++YCS+TGFG GPY RPGYD + +GGL+ +TG PDG P KVG+A D+ TG+YA
Sbjct: 144 PEIVYCSITGFGQTGPYAARPGYDFMIQGMGGLMSLTGEPDGEPMKVGVALADVFTGMYA 203
Query: 391 HGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQ 450
V+AAL H+ +TG+GQ ID LL Q ++L N N+L G+ +R G +H N+VP+Q
Sbjct: 204 SVGVLAALAHRDRTGEGQYIDLALLDVQTAVLANQATNWLVGGVVPQRLGNAHPNIVPYQ 263
Query: 451 VFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
F+T +G+V + G+D Q+ C + LA D ++ T
Sbjct: 264 AFETRDGHVIVAVGNDAQFTRFCAAAGCEALASDAKFAT 302
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 2/140 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C + LA D ++ T RV +RE L ++ + + +W+ + P +N
Sbjct: 285 FCAAAGCEALASDAKFATNVARVRHREELVALLKPLLAARGSADWIAALEAAGVPCGPIN 344
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFA E I+ + + H G + +VG + S T PP LG T+ L
Sbjct: 345 DVAQVFAQEQIRHRGMSVRMKHPA-GPVDLVGNPLQLSETPVAYDCAPPLLGADTERTLL 403
Query: 121 DLLNYDETTIAKLKEKKILG 140
D + D IA L++ +G
Sbjct: 404 D-IGLDADAIAALRDSGAIG 422
>gi|389871059|ref|YP_006378478.1| hypothetical protein TKWG_04895 [Advenella kashmirensis WT001]
gi|388536308|gb|AFK61496.1| hypothetical protein TKWG_04895 [Advenella kashmirensis WT001]
Length = 403
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 134/281 (47%), Positives = 188/281 (66%), Gaps = 9/281 (3%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TEL 270
PL+N+R+LDLTR++AGP+CT LADLGA+VIKVE+P TGD+ R WGPP+L + T
Sbjct: 3 PLANIRVLDLTRVLAGPWCTQNLADLGADVIKVERPGTGDDTRGWGPPYLKDQQGADTSE 62
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
+ Y+ NRNK+S+ +DF T G++++ LA + D++VEN+ G L + L Y L +IN
Sbjct: 63 AAYYLSANRNKRSLALDFTTDAGREVVLALAAKADIVVENYKVGGLKKYGLDYASLKQIN 122
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLAT 386
+LIYCS+TGFG GPY RPGYD I +GGL+ ITG P G P K G+A DL T
Sbjct: 123 PRLIYCSITGFGQTGPYATRPGYDYIIQGMGGLMSITGEHDDLPGGGPQKAGVAVSDLMT 182
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANV 446
G+YA A++AAL ++ +G GQ ID LL QV+ML N NY+ +G KR G +H N+
Sbjct: 183 GMYASVAILAALNERHSSGLGQYIDMALLDCQVAMLANQNLNYMTSGQVPKRAGNAHQNL 242
Query: 447 VPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
VP+QVF+ +G++ + G+D Q+ C+++N+ L D RY
Sbjct: 243 VPYQVFEVEDGHLILAVGNDTQFASFCRLINMPELVEDERY 283
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 68/136 (50%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+++N+ L D RY A RV NR+ L + + + + WL + + P +N
Sbjct: 268 FCRLINMPELVEDERYRKNAGRVVNRDSLIPLLASVMKTRRRDTWLADLEASNIPAGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I QV+AD + ++ E+ H G + + +S T + R PP LG+H++ +L+
Sbjct: 328 TIDQVYADPQVIARQMKLELPHPAAGTTPMTASPMRFSDTPIQYRNAPPMLGQHSEDILR 387
Query: 121 DLLNYDETTIAKLKEK 136
+ L + + IA L K
Sbjct: 388 EELGWGDEQIAALLGK 403
>gi|422628772|ref|ZP_16693980.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
syringae pv. pisi str. 1704B]
gi|330937472|gb|EGH41437.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
syringae pv. pisi str. 1704B]
Length = 406
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 192/294 (65%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
LS++R+LDL+R++AGP+ +LADLGA+VIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHIRVLDLSRVLAGPWAGQILADLGADVIKVERPGCGDDTRSWGPPFLQDAAGQNTTEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++++LA + D+++ENF L L Y+ L +N
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQRLVRELAAKSDIVIENFKVDGLAAYGLDYESLKAVNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY RPGYD + ++GGL+ +TG PDG P KVG+A D+ TG
Sbjct: 124 RLIYCSITGFGQSGPYARRPGYDFMIQALGGLMSLTGLPDGEEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ ++ GQ ID LL QV+ L N NYL G+ KR G +H N+V
Sbjct: 184 LYSTTAILAALAHRDQSDIGQYIDMALLDVQVACLANQAMNYLTTGVAPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + + G+D Q++ V A DPR+LT L +A + LI
Sbjct: 244 PYQDFPTADGDLILTVGNDSQFRKFAAVAGQPQWAEDPRFLTNKLRVAHRAELI 297
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 65/139 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
V A DPR+LT LRV +R L I T+ K T +W+ + P VN
Sbjct: 268 FAAVAGQPQWAEDPRFLTNKLRVAHRAELIPLIRQVTVFKATAQWVSELEAAGVPCGPVN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD H+ L E+ H G + V + S T E PP LGEHT VL+
Sbjct: 328 DLAQVFADPHVVARGLAIELPHALAGRVPQVASPIRLSETPVEYTRAPPLLGEHTAQVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
LL E + L+E +L
Sbjct: 388 ALLGIGEEELTLLREAGVL 406
>gi|302187072|ref|ZP_07263745.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
syringae pv. syringae 642]
Length = 406
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 135/294 (45%), Positives = 193/294 (65%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
LS++R+LDL+R++AGP+ +LADLGA+VIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHIRVLDLSRVLAGPWAGQILADLGADVIKVERPGCGDDTRSWGPPFLQDAAGQNTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++++LA + D+++ENF L L YK L E+N
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQRLVRELAAKSDIVIENFKVDGLAAYGLDYKSLKEVNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY RPGYD + ++GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 RLIYCSITGFGQSGPYARRPGYDFMIQALGGLMSLTGLPEGEEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ ++ GQ ID LL QV+ L N NYL G+ +R G +H N+V
Sbjct: 184 LYSTTAILAALAHRDQSNIGQCIDMALLDVQVACLANQAMNYLTTGVAPRRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + + G+D Q++ V A DPR+L+ L +A + LI
Sbjct: 244 PYQDFPTADGDLILTVGNDSQFRKFAAVAGQPQWAEDPRFLSNKLRVAHRAELI 297
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 66/139 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
V A DPR+L+ LRV +R L I T+ KTT +W+ + P VN
Sbjct: 268 FAAVAGQPQWAEDPRFLSNKLRVAHRAELIPLIRQVTVFKTTAQWVSELEAAGVPCGPVN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD + L E+ H G + V + S T E R PP LGEHT VL+
Sbjct: 328 DLAQVFADPQVVARGLAMELPHALAGRVPQVASPIRLSETPVEYRRAPPLLGEHTAQVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
LL E I L++ +L
Sbjct: 388 ALLGIGEEEITVLRKAGVL 406
>gi|392378349|ref|YP_004985509.1| putative L-carnitine dehydrogenase [Azospirillum brasilense Sp245]
gi|356879831|emb|CCD00759.1| putative L-carnitine dehydrogenase [Azospirillum brasilense Sp245]
Length = 400
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 136/290 (46%), Positives = 186/290 (64%), Gaps = 6/290 (2%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PLS+VR+L+L+R++AGP+ LADLGA+VIKVE+P GD+ R WGPP+ E S YF
Sbjct: 4 PLSHVRVLELSRVLAGPWAAQTLADLGADVIKVERPGAGDDTRAWGPPWAG--EESAYFL 61
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
NR K+S+ +DF+ PEGQ++++ LA Q DV++ENF G L + L Y L IN L+Y
Sbjct: 62 STNRGKRSITIDFERPEGQELVRKLAAQADVVIENFKVGGLVKYGLDYDSLKAINPGLVY 121
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATGLYAH 391
CS+TGFG GPY R GYD + +GGL+ ITG PD G P KVG+A D+ TGLYA
Sbjct: 122 CSITGFGQDGPYAKRAGYDFMIQGMGGLMSITGQPDTEAGGGPVKVGVAVTDVFTGLYAT 181
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
V+ AL H+ +TG+GQ ++ LL QV++L N NYL G +R G +H N+VP+Q
Sbjct: 182 IGVLGALAHRDRTGEGQWVNLALLDVQVAVLANQAMNYLVGGKAPQRLGNAHPNIVPYQA 241
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
F T +G++ + G+D Q+ C+V LA DPRY T +A L+
Sbjct: 242 FATLDGHIILAVGNDGQFAKFCQVAGRPELAQDPRYATNPARVANRKELV 291
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 74/139 (53%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V LA DPRY T RV NR+ L +E ++T+ +WL + V P +N
Sbjct: 262 FCQVAGRPELAQDPRYATNPARVANRKELVPILELLLEQRTSRDWLAALEAVGVPCGPIN 321
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+SQVFAD H+Q + +++ H G + V + YS T E PP LG+HTD VL+
Sbjct: 322 DVSQVFADPHVQARHIHQDLPHPTAGTVPTVASPIRYSATPIEHTAAPPTLGQHTDAVLE 381
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ L IA L+EK ++
Sbjct: 382 EALGLCAADIAALREKGVV 400
>gi|145589082|ref|YP_001155679.1| formyl-CoA transferase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145047488|gb|ABP34115.1| Formyl-CoA transferase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 427
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 131/294 (44%), Positives = 196/294 (66%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
LS++R+LDL+R++AGP+C LADLGA+VIKVE+P TGD+ R WGPPF+ N T+ S
Sbjct: 25 LSHIRVLDLSRVLAGPWCAQNLADLGADVIKVERPGTGDDTRHWGPPFVLNEQGLETKES 84
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF C+NRNK+S+ VD PEGQ+II+ LA + D+++EN+ G L + L Y++L ++ S
Sbjct: 85 AYFICINRNKRSITVDISKPEGQEIIRKLASESDIVLENYKVGDLAKYGLDYENLKKVKS 144
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDG----PPCKVGIASIDLATG 387
LIYCS+TGFG GP+ RPGYD I +GG + +TG +G P K G+A D+ TG
Sbjct: 145 DLIYCSITGFGQTGPFSHRPGYDFIVQGMGGFMSVTGEAEGVDGTGPQKAGVAIADIFTG 204
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA A++AA++H+ +TG+GQ ID LL TQ++++ NVG+ YL +G +R G + + +V
Sbjct: 205 MYATTAILAAVVHRDQTGEGQYIDMALLDTQIAVMANVGSAYLTSGEVPQRLGNASSTIV 264
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F TS+G++ + G+D Q++ LA +P Y+ L + L+
Sbjct: 265 PYQTFPTSDGWMIVAAGNDGQFRHFVTAGGEAQLADNPLYINNPLRVEHRKELV 318
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 79/131 (60%)
Query: 9 HLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFAD 68
LA +P Y+ LRVE+R+ L +EA T +KT EW+ + + + P +N+ +VF +
Sbjct: 297 QLADNPLYINNPLRVEHRKELVPLLEAMTRKKTKAEWIELLEKANVPCGPINNFKEVFEN 356
Query: 69 EHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDET 128
E + K+ E+ H G +K+V + S T EVR PPP LG+HTD +L++ LN DE+
Sbjct: 357 EQVIARKIQIEVPHPTAGKMKLVASPMHLSKTPIEVRMPPPTLGQHTDEILQERLNLDES 416
Query: 129 TIAKLKEKKIL 139
+IA L +K I+
Sbjct: 417 SIAALHKKGII 427
>gi|381202880|ref|ZP_09909989.1| formyl-CoA transferase [Sphingobium yanoikuyae XLDN2-5]
Length = 417
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 128/281 (45%), Positives = 183/281 (65%), Gaps = 6/281 (2%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE------L 270
L +++LDL+R++AGP+ T +LAD GA+VIK+E P GD+ R WGPPFL ++
Sbjct: 6 LEGIKVLDLSRVLAGPWSTQILADFGADVIKIELPGHGDDTRAWGPPFLTGSDGQPEIGT 65
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
S Y+ NRNK+S ++ TP+G ++I+ LA + D+LVENF G L + L Y L IN
Sbjct: 66 SAYYLSCNRNKRSAAINLATPQGAELIRRLAAEADILVENFKVGGLSKYGLDYDSLKAIN 125
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYA 390
+L+YCS+TGFG GPY DR GYD +A +GG + ITG DG P + G+A DL+TG++A
Sbjct: 126 PRLVYCSITGFGQTGPYADRGGYDFVAQGMGGFMSITGEEDGGPLRAGVAMADLSTGMFA 185
Query: 391 HGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQ 450
+++AAL H +TG+GQ+ID +LL TQ++ML N G N+L GI R G H VVP++
Sbjct: 186 TVSILAALRHAERTGEGQQIDVSLLDTQIAMLANQGMNWLVGGIVPGRLGNRHPTVVPYK 245
Query: 451 VFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
F+ ++G + I G+D+Q++ C M L DP Y T A
Sbjct: 246 TFEVADGMMIIAIGNDRQFRAFCTEMGHAELGTDPLYATSA 286
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 61/137 (44%), Gaps = 7/137 (5%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C M L DP Y T A R+ NR+ + +++ ++ + F P VN
Sbjct: 267 FCTEMGHAELGTDPLYATSAQRLINRDAIEAKVQEIVRPFARDDLMARFVAAGVPAGPVN 326
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAY----SLTQPEVRTPPPALGEHTD 116
SI VF D I + V E+ G ++I P VAY S T + R PP +GEH+
Sbjct: 327 SIQDVFEDPFIDARQTVHRYRREEDG-VEI--PTVAYPGKLSATPADYRHCPPRVGEHSR 383
Query: 117 YVLKDLLNYDETTIAKL 133
+L + L D+ + L
Sbjct: 384 EILGEWLGLDDGALDAL 400
>gi|424775621|ref|ZP_18202613.1| CoA-transferase [Alcaligenes sp. HPC1271]
gi|422888968|gb|EKU31349.1| CoA-transferase [Alcaligenes sp. HPC1271]
Length = 417
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 129/281 (45%), Positives = 186/281 (66%), Gaps = 9/281 (3%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTEL 270
PL +R+LDLTRI+AGP+CT LADLGA V K+E+P TGD+ R WGPPFL +T
Sbjct: 14 PLDGIRVLDLTRILAGPWCTQNLADLGANVYKIERPETGDDTRAWGPPFLQTPEKEDTAE 73
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
+ Y+ NRNK+S+ +D + EG +++ +A++CD+LVENF G L + L Y L EIN
Sbjct: 74 AAYYLSANRNKQSISLDIASQEGADVVRAMARECDILVENFKVGGLAKYGLDYASLKEIN 133
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLAT 386
+LIYCS+TGFG GPY +RPGYD + ++GG++ +TG P G P K G+A DL T
Sbjct: 134 PRLIYCSITGFGQTGPYAERPGYDFMIQAMGGMMSLTGERDDKPGGGPQKAGVAVADLMT 193
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANV 446
G+YA +++AAL + ++G GQ ID LL QV+ML N NYL +G KR G +H N+
Sbjct: 194 GMYATSSILAALFERSRSGLGQHIDIALLDCQVAMLANQNMNYLVSGQAPKRAGNAHQNL 253
Query: 447 VPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
VP+QVF T++G++ + G+++Q+ C+ + + D R+
Sbjct: 254 VPYQVFPTADGHIIVAIGNNRQFAAYCEAIGHPEIVEDSRF 294
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 61/135 (45%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C+ + + D R+ + RV++R+ L + + + + WL + P +N
Sbjct: 280 CEAIGHPEIVEDSRFNINSQRVKHRDELEQILSVAMQQHPSAYWLETLDKIGVPAGPIND 339
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
+ VF+ +Q + E+ H + G + + + +S + R PP LGEHT+ L+
Sbjct: 340 LHGVFSHPQVQARNMRIELDHSQAGKVSMTASPMRFSDSPVSYRMAPPQLGEHTEQALES 399
Query: 122 LLNYDETTIAKLKEK 136
LL D + + + +
Sbjct: 400 LLGADSPELKQWRNR 414
>gi|209884143|ref|YP_002288000.1| L-carnitine dehydratase/bile acid-inducible protein F [Oligotropha
carboxidovorans OM5]
gi|337742162|ref|YP_004633890.1| L-carnitine dehydratase/bile acid-inducible protein F [Oligotropha
carboxidovorans OM5]
gi|209872339|gb|ACI92135.1| L-carnitine dehydratase/bile acid-inducible protein F [Oligotropha
carboxidovorans OM5]
gi|336099826|gb|AEI07649.1| L-carnitine dehydratase/bile acid-inducible protein F [Oligotropha
carboxidovorans OM5]
Length = 407
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 135/284 (47%), Positives = 191/284 (67%), Gaps = 9/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+RI+AGP+CT LADLGA+VIKVE+P GD+ R WGPP+L N+T S
Sbjct: 5 LSHIRVLDLSRILAGPWCTQNLADLGADVIKVERPGVGDDTRGWGPPWLKDADGNDTRDS 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV ++ PEGQ ++++LAK DV +EN+ G L R NL Y+ + +N
Sbjct: 65 GYYASANRNKRSVTINIAAPEGQALVRELAKTADVFIENYKNGDLKRYNLDYESIRAVNP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
++YCSVTG+G GPY +PGYD + +GG++ ITG P G P KVG+A D+ TG
Sbjct: 125 SIVYCSVTGYGQDGPYAQKPGYDFVFQGMGGIMSITGERDDLPGGGPQKVGMALSDIMTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA A+++AL+++ ++GKGQ ID LL V+M N YL G KR+G +HA VV
Sbjct: 185 MYATIAILSALMYRQQSGKGQYIDMALLDCTVAMGSNQALAYLMTGNIPKRYGNAHAAVV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P+Q F T++G+V I G+D+Q+Q C+VM LA D R+ T +
Sbjct: 245 PYQPFATADGHVIITVGNDRQWQRYCEVMERPDLAADERFTTAS 288
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 69/138 (50%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C+VM LA D R+ T + R+ NRE+L EI E+T+++WL + P +N+
Sbjct: 270 CEVMERPDLAADERFTTASNRIVNREILLPEIARSMRERTSQDWLERLEAADVPCGPINN 329
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
QVF + + ++ + + + + + + T P R PPALGEHTD VL
Sbjct: 330 YKQVFENPQVVHRQMHRLVPRGDGAMVPTLASPLRLTETPPAYRKAPPALGEHTDDVLTG 389
Query: 122 LLNYDETTIAKLKEKKIL 139
LL + I L+ K++
Sbjct: 390 LLGKTDDEIRDLRNSKVI 407
>gi|388467012|ref|ZP_10141222.1| CoA-transferase, family III [Pseudomonas synxantha BG33R]
gi|388010592|gb|EIK71779.1| CoA-transferase, family III [Pseudomonas synxantha BG33R]
Length = 406
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 138/294 (46%), Positives = 189/294 (64%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIKVE+P +GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWSGQILADLGAEVIKVERPGSGDDTRAWGPPFLKDAYGENTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ++++DLA + D+L+ENF G L L Y+ L EIN
Sbjct: 64 AYYLSANRNKESVTIDFTKPEGQKLVRDLAAKSDILIENFKVGGLAAYGLDYESLKEINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 ELIYCSITGFGQTGPYAARAGYDFMIQGLGGLMSLTGRPEGDEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ G GQ ID LL QV+ L N NYL G+ KR G +H N+V
Sbjct: 184 LYSTVAILAALAHRDHDGGGQHIDMALLDVQVACLANQAMNYLTTGVSPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V DPR+ T +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAEVAGQPQWGDDPRFATNQARVANRAALI 297
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 63/127 (49%)
Query: 13 DPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEHIQ 72
DPR+ T RV NR L I T+ K T EW+ + V P +N ++QVF+D ++
Sbjct: 280 DPRFATNQARVANRAALIPLIRQATVFKATAEWVSQLERVGVPCGPINDLAQVFSDPQVK 339
Query: 73 DIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETTIAK 132
L E+ H G + V + S T E R PP LGEHT VL+ +L +A
Sbjct: 340 ARGLAMELPHALAGMVPQVASPIRLSKTPVEYRNAPPLLGEHTLQVLQGILGLGAANVAA 399
Query: 133 LKEKKIL 139
LKE I+
Sbjct: 400 LKEAGIV 406
>gi|239606951|gb|EEQ83938.1| CAIB/BAIF family enzyme [Ajellomyces dermatitidis ER-3]
gi|327350598|gb|EGE79455.1| CAIB/BAIF family enzyme [Ajellomyces dermatitidis ATCC 18188]
Length = 452
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 132/299 (44%), Positives = 193/299 (64%), Gaps = 8/299 (2%)
Query: 198 YENFYSLDLALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDEC 257
+ +F + A + +LPL+ +R+LD++R++AGP+CT +L DLGAE+IK+E PV GD+
Sbjct: 31 WRSFATTATASTQNAENLPLAGIRVLDMSRVLAGPYCTQILGDLGAEIIKIEHPVRGDDT 90
Query: 258 RKWGPPFLNNTE-------LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVEN 310
R WGPPF + S Y+ VNRNKKS+ + F P G +I+ L K+CDVLVEN
Sbjct: 91 RAWGPPFAKYKDGTKEGPGESAYYLSVNRNKKSLGLSFAHPSGVEILHKLVKECDVLVEN 150
Query: 311 FVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHP 370
++PG L + + Y + IN +LIY S+TG+G GPY R GYD++ + GL+HITG
Sbjct: 151 YIPGSLKKYKMDYDTVKAINPKLIYASITGYGQTGPYSQRAGYDVMVEAEMGLMHITGSR 210
Query: 371 DGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYL 430
DGPP KVG+A DL TGLY A+MAALL + +TGKGQ ID L QV+ L N+ ++ L
Sbjct: 211 DGPPVKVGVAVTDLTTGLYTSNAIMAALLGRARTGKGQHIDACLSDCQVATLSNLASSAL 270
Query: 431 NAG-IEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYL 488
+G + RWGT+H ++VP++ +KT +G + +G G+DK + +C + D R++
Sbjct: 271 ISGEKDSGRWGTAHPSIVPYRAYKTKDGDILLGGGNDKLFGVLCDRLGQPEWKADERFV 329
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 83/139 (59%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + D R++ LRV+NR++L K IE +T ++TT+EWL I +G PY+ +N
Sbjct: 313 LCDRLGQPEWKADERFVRNNLRVKNRDVLDKMIEDRTRQRTTQEWLEILEGSGMPYSAIN 372
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I H+ +V E+ H G +K+V + YS +P VRTPPP LG+H+D VL+
Sbjct: 373 DIQGTLNHSHVLARDMVVEVDHPTCGPMKLVNTPIKYSDAKPGVRTPPPTLGQHSDEVLR 432
Query: 121 DLLNYDETTIAKLKEKKIL 139
DL++ E IA+LK+ ++
Sbjct: 433 DLVDLGENEIAQLKKDGVV 451
>gi|448746485|ref|ZP_21728152.1| CoA-transferase family III [Halomonas titanicae BH1]
gi|445565823|gb|ELY21931.1| CoA-transferase family III [Halomonas titanicae BH1]
Length = 412
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 128/278 (46%), Positives = 185/278 (66%), Gaps = 4/278 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL+ +++LD++R++AGP+C +LAD+GA+VIKVE+P +GD+ R WGPP+L +E S Y+
Sbjct: 15 PLAGIKVLDISRVLAGPWCGQMLADMGADVIKVERPGSGDDTRHWGPPWLAGSEESAYYL 74
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
C NR K+S+ VD PEGQ +IK L DVL+ENF G L R L Y L +N +LIY
Sbjct: 75 CANRGKRSLTVDMAKPEGQAVIKQLVANSDVLIENFKVGGLKRYGLDYASLKALNPRLIY 134
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATGLYAH 391
CS+TGFG + PY R GYD + ++GG++ +TG PD G P K G+A D+ TGLYA
Sbjct: 135 CSITGFGQESPYAHRAGYDFMIQAMGGIMSLTGKPDSEPGGGPVKSGVAFTDIFTGLYAA 194
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A++AAL + + +G ID L+ QV +L N NYL +G +R G +H N+VP+Q
Sbjct: 195 NAILAALYQRRDSSEGCHIDMALMDVQVGVLANQALNYLTSGNVPQRLGNAHPNIVPYQA 254
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
F T +G++ + G+D+Q++ C V++L LA DPR+ T
Sbjct: 255 FATQDGHMIMAVGNDEQFKRFCAVLSLPALAEDPRFAT 292
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 73/122 (59%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C V++L LA DPR+ T RV NR LL ++EA +++T+EWL F+ V P +N
Sbjct: 275 FCAVLSLPALAEDPRFATNGARVNNRALLVPQLEAALAQRSTDEWLAAFEAVGVPCGPIN 334
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ +VF D H++ L + + H++ G + +V + ++ Q T PP LG+HT+ VL+
Sbjct: 335 TLDRVFDDPHVKARGLKQTLPHDQAGQVDLVANPIRFNGAQMSATTAPPHLGQHTESVLE 394
Query: 121 DL 122
+L
Sbjct: 395 EL 396
>gi|311108959|ref|YP_003981812.1| CoA-transferase [Achromobacter xylosoxidans A8]
gi|310763648|gb|ADP19097.1| CoA-transferase family III family protein 45 [Achromobacter
xylosoxidans A8]
Length = 415
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 138/294 (46%), Positives = 188/294 (63%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
L NV++LDL+R++AGP+ L DLGAEVIKVE+P TGD+ R WGPP++ + T S
Sbjct: 12 LQNVKVLDLSRVLAGPWAAQTLGDLGAEVIKVERPGTGDDTRAWGPPYVTDPAGQPTGES 71
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ C NRNK+SV +DF PEGQ++++ LA+QCDVL+ENF G L + L Y LS++N
Sbjct: 72 AYYMCANRNKQSVSIDFTKPEGQELVRRLAQQCDVLIENFKTGGLAQYGLDYAALSQLNP 131
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
+L+YCSVTGFG GPY R GYD + +GGL+ ITGHPD G P KVG+A D+ TG
Sbjct: 132 RLVYCSVTGFGQDGPYAHRAGYDFLIQGMGGLMSITGHPDGMPGGGPMKVGVALTDILTG 191
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA A++AAL + TG+GQ ID LL V+ L N NYL +R G +H N +
Sbjct: 192 LYASTAILAALQAREHTGRGQHIDLALLDVGVACLGNQAMNYLYGQQAPRRMGNAHPNTL 251
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G++ + G+D Q+ +C + A D R+ A +A LI
Sbjct: 252 PYQDFPTADGHMILAVGNDGQFARLCVAIERPQWAEDERFARNAARIAHRDALI 305
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 69/140 (49%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + A D R+ A R+ +R+ L + + A T+ ++T +W+ + + P +N
Sbjct: 276 LCVAIERPQWAEDERFARNAARIAHRDALIEGLRAITVTRSTRDWIDLLEQHGVPCGPIN 335
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+++ VF D +Q L + H + G++ +V + S T R PP LG+HTD VL
Sbjct: 336 TVADVFEDPQVQARGLKMSMLHPQAGEVPLVASPIRLSDTPVSYRHAPPQLGQHTDAVLA 395
Query: 121 DLLNYDETTIAKLKEKKILG 140
L + T+ + +LG
Sbjct: 396 RFLGLNADTLHTHRTNGVLG 415
>gi|302926273|ref|XP_003054262.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735203|gb|EEU48549.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 437
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 134/292 (45%), Positives = 191/292 (65%), Gaps = 9/292 (3%)
Query: 209 SSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNT 268
S+ LPL +R+LD+TR++AGP+CT +L DLGAEVIK+E PV GD+ R WGPP+
Sbjct: 26 SAVGTGLPLEGIRVLDMTRVLAGPYCTQILGDLGAEVIKIEHPVRGDDTRAWGPPYAKYK 85
Query: 269 ELST--------YFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLN 320
E S+ YF NRNKKS+ + F+ EG +++ LA +CDVLVEN++PG L + +
Sbjct: 86 EGSSAKGPGESAYFLGANRNKKSLGLSFQHKEGVEVLHKLAAKCDVLVENYLPGTLKKYS 145
Query: 321 LGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIA 380
+ Y+ L +IN LIY S+TG+G GPY +R GYD++ + GL+HITG DGPP KVG+A
Sbjct: 146 MDYETLRKINPALIYASITGYGQTGPYANRAGYDVMVEAEFGLMHITGERDGPPVKVGVA 205
Query: 381 SIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAG-IEGKRW 439
DL TGLY ++MAALL + K+GKGQ ID L Q + L N+ ++ L +G + RW
Sbjct: 206 VTDLTTGLYTSNSIMAALLGRAKSGKGQHIDVALSDCQTATLANIASSCLISGKKDSGRW 265
Query: 440 GTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
GT+H ++VP++ F+T +G + G G+D+ + +C + H D RY T A
Sbjct: 266 GTAHPSIVPYKSFETKDGGILFGGGNDRLFGVLCDGLGQSHWKDDTRYKTNA 317
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 81/140 (57%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + H D RY T A RV NR+ L +IEA T KTT+EWL IF+G PYA +N
Sbjct: 298 LCDGLGQSHWKDDTRYKTNADRVANRKDLEAKIEALTKLKTTQEWLEIFEGKGMPYAAIN 357
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ EH + +V E+ H++ G IK+V + S T P +R+ PP LG+HTD VL+
Sbjct: 358 DVQGTLNHEHTKARNMVVEMDHQECGPIKMVNTPIKLSETPPTIRSVPPTLGQHTDEVLQ 417
Query: 121 DLLNYDETTIAKLKEKKILG 140
+ L E + L+EK ++G
Sbjct: 418 EHLGLSEADVISLREKGVVG 437
>gi|121702535|ref|XP_001269532.1| CAIB/BAIF family enzyme [Aspergillus clavatus NRRL 1]
gi|119397675|gb|EAW08106.1| CAIB/BAIF family enzyme [Aspergillus clavatus NRRL 1]
Length = 447
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 132/291 (45%), Positives = 192/291 (65%), Gaps = 8/291 (2%)
Query: 207 ALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN 266
A+ + +LPL +R+LD+TR++AGP+CT +L DLGA++IKVE PV GD+ R WGPP+
Sbjct: 35 AIPASEDTLPLKGIRVLDMTRVLAGPYCTQILGDLGADIIKVEHPVRGDDTRAWGPPYAK 94
Query: 267 NTELS-------TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRL 319
T+ S Y+ VNRNK+S+ + F G +I+ LAK+CDVLVEN++PG L +
Sbjct: 95 YTDESRKGPGESAYYLAVNRNKRSIGLSFAHKSGIEILHKLAKECDVLVENYIPGSLKKY 154
Query: 320 NLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGI 379
L Y+ L IN +LIY S+TG+G GPY +R GYD++ + GL+HITG DG P KVG+
Sbjct: 155 GLDYETLRSINPKLIYASITGYGQTGPYSNRAGYDVMVEAEFGLMHITGSRDGDPVKVGV 214
Query: 380 ASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAG-IEGKR 438
A DL TGLY A+MAALL + +TG+GQ ID L QV+ L N+ ++ L +G + R
Sbjct: 215 AVTDLTTGLYTSNAIMAALLARVRTGQGQHIDACLSDCQVATLANIASSALISGKKDSGR 274
Query: 439 WGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
WGT H ++VP++ +KT +G + +G G+D+ + +C + DPR++T
Sbjct: 275 WGTEHPSIVPYRSYKTIDGDILLGGGNDRLFGIICDRLGYPEWKADPRFVT 325
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 83/139 (59%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + DPR++T + RV++R+ L IE +KTT+EWL I +G PYA +N
Sbjct: 308 ICDRLGYPEWKADPRFVTNSDRVKHRKELDGMIEKTIAQKTTQEWLDILEGSGMPYAAIN 367
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I H+Q +V E+ H G IK+V + YS P VR PPP LG+HTD +L+
Sbjct: 368 DIQGTLNHSHVQARGMVTEVDHPACGPIKLVNTPIKYSHATPGVRRPPPTLGQHTDEILE 427
Query: 121 DLLNYDETTIAKLKEKKIL 139
++L+Y ++ IA+LK++ +L
Sbjct: 428 EILDYGKSDIARLKKEGVL 446
>gi|325273963|ref|ZP_08140124.1| CAIB/BAIF family protein [Pseudomonas sp. TJI-51]
gi|324100897|gb|EGB98582.1| CAIB/BAIF family protein [Pseudomonas sp. TJI-51]
Length = 406
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 135/294 (45%), Positives = 191/294 (64%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGA+VIKVE+P +GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWSGQILADLGADVIKVERPGSGDDTRAWGPPFLKGANGENTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++++LA +CD+++ENF G L L Y+ L N
Sbjct: 64 AYYLSANRNKRSVTIDFTRPEGQRLVRELAAKCDIVIENFKVGGLAAYGLDYQSLKADNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 RLIYCSITGFGQTGPYARRAGYDFMIQGLGGLMSLTGRPEGEEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ +TG GQ +D LL QV+ L N NYL G +R G +H N+V
Sbjct: 184 LYSTVAMLAALAHRDQTGVGQHVDMALLDVQVACLANQAMNYLTTGTAPRRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ T L +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDSQFRKFAEVAGQPQWATDPRFATNKLRVANRAELI 297
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 66/139 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ T LRV NR L I T+ KTT EW+ + P +N
Sbjct: 268 FAEVAGQPQWATDPRFATNKLRVANRAELIPLIRQATVFKTTAEWVSQLEAAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVF D + L I H G++ V + S T E R PP LGEHT+ VL+
Sbjct: 328 DLAQVFRDPQVLARGLAVSIPHTLAGNVPQVASPIRLSATPVEYRLAPPMLGEHTEVVLE 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
++L + +L+ +L
Sbjct: 388 EVLGLGAEEVRQLRSVGVL 406
>gi|402850381|ref|ZP_10898583.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhodovulum
sp. PH10]
gi|402499329|gb|EJW11039.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhodovulum
sp. PH10]
Length = 419
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 136/293 (46%), Positives = 189/293 (64%), Gaps = 10/293 (3%)
Query: 213 PSLP--LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL 270
PS P L VR+LDL+R++AGP+CT +L DLGA+VIK+E P GD+ R WGPPF T
Sbjct: 10 PSPPHALEGVRVLDLSRVLAGPWCTQILGDLGADVIKIEAPGRGDDTRAWGPPFHGPTPA 69
Query: 271 S-----TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKH 325
S Y+ NRNK+SV +DF TPEG +++ LA+ DV++EN+ G L + L Y
Sbjct: 70 SGRGESAYYLSANRNKRSVAIDFATPEGGALVRKLAQSADVVIENYKVGGLVKYGLDYAT 129
Query: 326 LSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD---GPPCKVGIASI 382
LS +L+YCS++GFG GPY R GYD +A +GGL+ ITG PD G P KVG+A
Sbjct: 130 LSAERKRLVYCSISGFGQFGPYAGRGGYDFVAQGMGGLMSITGRPDEDGGEPTKVGVAIC 189
Query: 383 DLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTS 442
DL TG+YA AV+AAL H +TG+GQ IDC LL +QV+ML N ++YL AG+ R G +
Sbjct: 190 DLFTGVYAATAVLAALRHAERTGEGQHIDCALLDSQVAMLANQASSYLVAGVVAGRLGNA 249
Query: 443 HANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILA 495
H +VP++ F+ ++G V + G+D Q++ +C + L +P Y + A +A
Sbjct: 250 HPTIVPYRTFRAADGDVVVAVGNDGQFRALCAALGRLDLTENPAYGSNAARIA 302
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 73/146 (50%), Gaps = 13/146 (8%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAK--TMEKTTEEWLLIFQGVSFPYAQ 58
+C + L +P Y + A R+ NR+ L E++ T+ K LI G+ P
Sbjct: 279 LCAALGRLDLTENPAYGSNAARIANRDALEAELQKTIGTLPKAPFLEKLIADGI--PAGP 336
Query: 59 VNSISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAY----SLTQPEVRTPPPALGEH 114
+N+I +VFAD + ++V+ ++ E ++ P VAY S T + R PPP LGEH
Sbjct: 337 INTIDEVFADPQVTAREMVRTVAREDGTEV----PGVAYPPRLSRTPADYRRPPPRLGEH 392
Query: 115 TDYVLKDLLNYDETTIAKLKEKKILG 140
T VL + L D T +L K ++G
Sbjct: 393 TAEVLAE-LGLDPATQKELAAKGVVG 417
>gi|384917810|ref|ZP_10017919.1| L-carnitine dehydratase/bile acid-inducible protein F [Citreicella
sp. 357]
gi|384468342|gb|EIE52778.1| L-carnitine dehydratase/bile acid-inducible protein F [Citreicella
sp. 357]
Length = 373
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 137/281 (48%), Positives = 181/281 (64%), Gaps = 3/281 (1%)
Query: 213 PSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN--NTEL 270
P+ PL V++++L RI+AGP+ +LADLGAEV+KVE P GD+ RKWGPPF++ +
Sbjct: 5 PNGPLEGVKVVELARILAGPWAGQVLADLGAEVVKVEAP-RGDDTRKWGPPFIDREDERS 63
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
+ YF C NR K+SV DF TPEGQ+ ++DL + D+L+ENF G L + L + L++IN
Sbjct: 64 AAYFHCCNRGKQSVVADFTTPEGQRQVRDLVRDADILIENFKVGGLAKYGLDHASLAQIN 123
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYA 390
LIYCSVTGFG GPY R GYD I + G + ITG+PDG P + G+A DL TGLY+
Sbjct: 124 PGLIYCSVTGFGQDGPYAHRAGYDYIIQGMSGFMSITGNPDGQPQRTGVAITDLFTGLYS 183
Query: 391 HGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQ 450
++AAL K +TGKGQ +D LL V+ N NYL G R G H N+ P+Q
Sbjct: 184 VSGILAALHQKQRTGKGQHLDMALLDCAVAATANQAMNYLATGAAPGRTGNYHPNLTPYQ 243
Query: 451 VFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
VF S+GY+ I TG+D QYQ +C ++ L LA P Y T A
Sbjct: 244 VFDCSDGYIIIATGNDPQYQRLCGLLGLPDLAAHPDYATNA 284
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ L LA P Y T A R+ NR+ L + A+T + + + L + P +N
Sbjct: 265 LCGLLGLPDLAAHPDYATNADRIANRQPLEALLMAETAKWSKADLLAACEREGIPAGPIN 324
Query: 61 SISQVFADEHIQ 72
+++V AD +Q
Sbjct: 325 DLAEVMADPQVQ 336
>gi|389703266|ref|ZP_10185501.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter sp. HA]
gi|388611481|gb|EIM40582.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter sp. HA]
Length = 412
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 135/280 (48%), Positives = 182/280 (65%), Gaps = 9/280 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ NT +
Sbjct: 4 LKGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPGVGDDTRMWGPPWMKTPSGENTREA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF C NRNK SV VD + GQ++I+D+AK DV++EN+ G L R L Y+ L IN
Sbjct: 64 GYFQCANRNKYSVTVDIASEPGQELIRDIAKTADVVIENYKVGALARYGLDYERLKAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPC----KVGIASIDLATG 387
+L+YCS+TGFG GP + PGYD I + GL+ ITG D P KVG+A +D+ TG
Sbjct: 124 KLVYCSITGFGQNGPRAEEPGYDFIIQGMSGLMSITGEADDVPGGGAQKVGVAVVDIQTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA A+ AALL ++ TGKGQ ID +LL QV+ L N G NYL +G KR G H N+V
Sbjct: 184 LYATIAIQAALLARHHTGKGQYIDMSLLDVQVAALANQGMNYLTSGTAPKRMGNHHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
P+Q FK + I G+DKQ++D+C + L L D ++
Sbjct: 244 PYQTFKAKDKEFIIACGNDKQFRDLCMAIELSELLQDEKF 283
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 2/139 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L L D ++ RV++R+ L + + K +EW+ V P +N
Sbjct: 268 LCMAIELSELLQDEKFQRNQDRVKHRDELIPLLSEYFLAKNAKEWVDAIHAVKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI + + +++ ++ H K++G + S T + R PP LG+HT +L
Sbjct: 328 SIEDALNEPQVAAREMLVDLPHPLNAQFKMIGSPIKLSDTPVQYRHAPPKLGQHTQQILS 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ +E IA L + I+
Sbjct: 388 QFRSPEE--IAALNAQGII 404
>gi|255935381|ref|XP_002558717.1| Pc13g02780 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583337|emb|CAP91347.1| Pc13g02780 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 446
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 133/288 (46%), Positives = 192/288 (66%), Gaps = 8/288 (2%)
Query: 210 SENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE 269
+ + SLPL+ +R+LD+TR++AGP+CT L DLGA+VIKVE PV GD+ R WGPP+ +
Sbjct: 37 AADGSLPLAGIRVLDMTRVLAGPYCTQXLGDLGADVIKVEHPVRGDDTRAWGPPYAKYED 96
Query: 270 LS-------TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLG 322
S Y+ VNRNKKS+ + F+ G +I+ LAK+CDVLVEN++PG L + +
Sbjct: 97 ASRKGPGESAYYLAVNRNKKSLGLSFQHKSGVEILHKLAKECDVLVENYLPGGLKKYGMD 156
Query: 323 YKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASI 382
Y+ L EIN +LIY S+TG+G GPY +R GYD++ + GL+HITG DG P KVG+A
Sbjct: 157 YETLREINPKLIYASITGYGQTGPYSNRAGYDVMVEAEMGLMHITGARDGAPVKVGVAVT 216
Query: 383 DLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGI-EGKRWGT 441
DL TGLY A+MAAL+ + +TG+GQ ID L QV+ L N+ ++ L +G + RWGT
Sbjct: 217 DLTTGLYTSNAIMAALIARGRTGRGQHIDACLSDCQVATLSNLASSALISGQKDSGRWGT 276
Query: 442 SHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+H ++VP++ +KTS+G + G G+DK + +C + D R++T
Sbjct: 277 AHPSIVPYRSYKTSDGDILFGGGNDKLFGVLCDRLGFSEWKTDARFVT 324
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 83/139 (59%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + D R++T + RV++R + IE+ TM+KTT+EWL IF+G PYA VN
Sbjct: 307 LCDRLGFSEWKTDARFVTNSDRVQHRAEIDGMIESTTMQKTTQEWLDIFEGSGMPYAAVN 366
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I +H+ +V E+ H G IK+V + YS P VRTPPP LG+HTD +L
Sbjct: 367 DIQGTLNHKHVLARDMVTEVEHPACGPIKLVNTPIKYSEATPGVRTPPPTLGQHTDEILG 426
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L+Y E IA+LK++ ++
Sbjct: 427 SVLDYGEADIARLKDEGVV 445
>gi|255318747|ref|ZP_05359974.1| L-carnitine dehydrogenase [Acinetobacter radioresistens SK82]
gi|255304245|gb|EET83435.1| L-carnitine dehydrogenase [Acinetobacter radioresistens SK82]
Length = 404
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 135/280 (48%), Positives = 188/280 (67%), Gaps = 9/280 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
L+ +R+LDL+R++AGP+C +LADLGAEVIKVE+P GD+ R WGPP++ N T +
Sbjct: 4 LTGIRVLDLSRVLAGPWCGQILADLGAEVIKVERPQHGDDTRSWGPPWMKNDAGDDTREA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK SV +D + EGQ++IK L + DV++EN+ G L + +L Y L+ IN
Sbjct: 64 AYYQSANRNKLSVAIDIASLEGQELIKALIQDTDVVIENYKTGSLKKYDLDYDSLAAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
QL+YCS+TGFG GP + PGYD I +GGL+ +TG P G P KVG+A DLATG
Sbjct: 124 QLVYCSITGFGQDGPRAEEPGYDFIIQGMGGLMSVTGEKDDLPGGGPQKVGVAFSDLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL++++TG GQ ID LL Q++ L N G NYL +G R+G +HAN+V
Sbjct: 184 LYSTIAIQAALLNRHETGLGQYIDMALLDVQIATLANQGMNYLASGKVPGRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
P+QVFK ++ I G+DKQ+ +C+ + L L DPR+
Sbjct: 244 PYQVFKAADRDFIIACGNDKQFIQLCQSIGLAELPNDPRF 283
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 71/137 (51%), Gaps = 2/137 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + L L DPR+ A R+++R + + ++KT +EW+ V P +N
Sbjct: 268 LCQSIGLAELPNDPRFSRNADRIKHRNEIIDILSKHFLKKTADEWVTAIHAVKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q F + + K++ E+ H + ++G + S T E R PP LGEHT+ +L
Sbjct: 328 NLEQAFQEPQVVARKMLVEMPHPYKQKLTVIGSPIKMSRTPVEYRRAPPTLGEHTEQILS 387
Query: 121 DLLNYDETTIAKLKEKK 137
+ + ++ + K+K ++
Sbjct: 388 RVASQEQ--LKKIKSRR 402
>gi|399522969|ref|ZP_10763630.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
pseudoalcaligenes CECT 5344]
gi|399109168|emb|CCH40191.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
pseudoalcaligenes CECT 5344]
Length = 407
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 134/294 (45%), Positives = 192/294 (65%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ + DLGAEVIKVE+P +GD+ R WGPP++ N++ +
Sbjct: 5 LSHIRVLDLSRVLAGPWAGQIFGDLGAEVIKVERPGSGDDTRHWGPPYIKDAEGNDSREA 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NRNK+S+ +DF PEGQ+++++L QCDVL+ENF G L L Y+ L IN
Sbjct: 65 AYFQSANRNKQSLTLDFTQPEGQRLVRELIAQCDVLLENFKVGGLAAYGLDYESLKAINP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 125 RLIYCSITGFGQSGPYAKRAGYDFMIQGLGGLMSLTGRPEGEEGAGPMKVGVALTDILTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA V+AAL + ++G GQ ID LL QV+ L N NYL G+ KR G +H N+V
Sbjct: 185 LYATVGVLAALNQREQSGVGQHIDVALLDVQVACLANQAMNYLATGVSPKRLGNAHPNIV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F +++G + G+D Q++ C+V + +LA D R++T +A + LI
Sbjct: 245 PYQDFPSADGNFILAVGNDGQFRKFCEVAGIANLADDSRFVTNKARVAHRAELI 298
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V + +LA D R++T RV +R L + T+ KTT +W+ + P +N
Sbjct: 269 FCEVAGIANLADDSRFVTNKARVAHRAELIPLLRQATVFKTTAQWIEQLEKAGVPCGPIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ QVFAD +Q L ++ + V + S T R+ PP LG+HT+ +L+
Sbjct: 329 DLQQVFADPQVQARGLRLDLPNALGSSTPQVASPLRLSATPVAYRSAPPLLGQHTEALLQ 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
LL ET IA+L+E ++
Sbjct: 389 RLLGMSETQIAELREAGVI 407
>gi|409399085|ref|ZP_11249457.1| acyl-CoA transferase/carnitine dehydratase [Acidocella sp. MX-AZ02]
gi|409131729|gb|EKN01418.1| acyl-CoA transferase/carnitine dehydratase [Acidocella sp. MX-AZ02]
Length = 394
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 125/274 (45%), Positives = 186/274 (67%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PLS +ILDL+R++AGP+ + + ADLGAEVIK+E+P GD+ R WGPPF+ + +S YF
Sbjct: 3 PLSGYKILDLSRVLAGPWASQIFADLGAEVIKIERPGKGDDTRAWGPPFVEESGISAYFC 62
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
NR KKSV +D P+GQ +I+ LA++ DV++ENF G L +L LG + L +N +L+Y
Sbjct: 63 AANRGKKSVAIDISKPQGQALIRRLAEKADVVLENFKFGGLAKLGLGPEDLLTLNPRLVY 122
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TGFG GPY++R GYD + +GGL+ +TG P+G P K G+A +D+ TGLYA AVM
Sbjct: 123 CSITGFGQTGPYRNRAGYDFLMQGMGGLMSVTGAPEGEPMKAGVAVVDVFTGLYASNAVM 182
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
AALL + ++G GQ ID L Q++ + N ++YL +G + R G +H ++VP+QVF T
Sbjct: 183 AALLERERSGLGQHIDLALFDVQIAAMANQISSYLVSGAQPPRLGNAHPSIVPYQVFPTL 242
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+G++ + G+D+Q+ + L+ D R+ T
Sbjct: 243 DGHLILAIGNDEQFARFVTLAGAPELSQDERFAT 276
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 4/131 (3%)
Query: 9 HLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFAD 68
L+ D R+ T RV++R +L +EA +TT++W + P +N + + AD
Sbjct: 267 ELSQDERFATNPARVKHRAILVPLLEALLAARTTKDWTEALEAFGIPGGPINEFADIDAD 326
Query: 69 EHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDET 128
+Q + K + G V + +S ++ PPP LG TD VL +L ET
Sbjct: 327 PQVQARGIFKTLGPGLRG----VASPMRFSRSEVADDRPPPHLGADTDEVLASVLALSET 382
Query: 129 TIAKLKEKKIL 139
L++ KI+
Sbjct: 383 ERTALRDNKII 393
>gi|329890312|ref|ZP_08268655.1| coA-transferase family III family protein [Brevundimonas diminuta
ATCC 11568]
gi|328845613|gb|EGF95177.1| coA-transferase family III family protein [Brevundimonas diminuta
ATCC 11568]
Length = 404
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 137/301 (45%), Positives = 189/301 (62%), Gaps = 11/301 (3%)
Query: 203 SLDLALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGP 262
++ + +S P PL+ VR+LDL+R++AGP+ T LADLGAEVIK+E+P GD+ R WGP
Sbjct: 4 AVSIPAASPFPHGPLTGVRVLDLSRVLAGPWATQTLADLGAEVIKIERPRAGDDTRHWGP 63
Query: 263 PFLNNTEL----STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDR 318
PF + + YF C NR KKSV +D +PEG + ++ LA CDV+VENF G L +
Sbjct: 64 PFTTTADGQPGDAAYFLCANRGKKSVELDIASPEGAEAVRRLAATCDVVVENFKTGGLKK 123
Query: 319 LNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----P 374
L Y L+ +N +L+YCS+TGFG GP R GYD + ++GGL+ ITG PDG P
Sbjct: 124 YGLDYASLAAVNPKLVYCSITGFGQDGPDAHRAGYDYMIQAMGGLMSITGQPDGAPGAEP 183
Query: 375 CKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGI 434
KVG+A +DL TGLYA A++AAL H TG+GQ +D L Q +ML N NY +G
Sbjct: 184 MKVGVAVVDLFTGLYASNAILAALWHARATGEGQHVDIALFDVQTAMLANQATNYFVSGK 243
Query: 435 EGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALIL 494
R G +H N+ P+Q F S+G V I G+D Q++ +C + LQ ++ R+ T AL +
Sbjct: 244 APSRMGNAHPNLAPYQPFPCSDGMVIIAVGNDGQFRALCGALELQ---VEDRFATNALRV 300
Query: 495 A 495
A
Sbjct: 301 A 301
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 54/120 (45%), Gaps = 4/120 (3%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + LQ ++ R+ T ALRV NRE L I KT T + + + P VN
Sbjct: 281 LCGALELQ---VEDRFATNALRVANREALGPLIATKTRGFTMQGLMQALEAAGVPCGPVN 337
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGD-IKIVGPAVAYSLTQPEVRTPPPALGEHTDYVL 119
+I QVF + L E + D ++ V + S T PPP LG+ T+ VL
Sbjct: 338 TIDQVFEEPQAIHRGLTVEQTRPDLVDPVRTVASPIRLSKTPVRYDAPPPKLGQDTEAVL 397
>gi|262378074|ref|ZP_06071231.1| formyl-CoA transferase [Acinetobacter radioresistens SH164]
gi|262299359|gb|EEY87271.1| formyl-CoA transferase [Acinetobacter radioresistens SH164]
Length = 405
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 135/280 (48%), Positives = 188/280 (67%), Gaps = 9/280 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
L+ +R+LDL+R++AGP+C +LADLGAEVIKVE+P GD+ R WGPP++ N T +
Sbjct: 4 LTGIRVLDLSRVLAGPWCGQILADLGAEVIKVERPQHGDDTRSWGPPWMKNDAGDDTREA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK SV +D + EGQ++IK L + DV++EN+ G L + +L Y L+ IN
Sbjct: 64 AYYQSANRNKLSVAIDIASLEGQELIKALIQDTDVVIENYKTGSLKKYDLDYDSLAAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
QL+YCS+TGFG GP + PGYD I +GGL+ +TG P G P KVG+A DLATG
Sbjct: 124 QLVYCSITGFGQDGPRAEEPGYDFIIQGMGGLMSVTGEKDDLPGGGPQKVGVAFSDLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL++++TG GQ ID LL Q++ L N G NYL +G R+G +HAN+V
Sbjct: 184 LYSTIAIQAALLNRHETGLGQYIDMALLDVQIATLANQGMNYLASGKVPGRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
P+QVFK ++ I G+DKQ+ +C+ + L L DPR+
Sbjct: 244 PYQVFKAADRDFIIACGNDKQFIQLCQSIGLAELPNDPRF 283
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 5/143 (3%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + L L DPR+ A R+++R + + ++KT +EW+ V P +N
Sbjct: 268 LCQSIGLAELPNDPRFSRNADRIKHRNEIIDILSKHFLKKTADEWVTAIHAVKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q F + + K++ E+ H + ++G + S T E R PP LGEHT+ +L
Sbjct: 328 NLEQAFQEPQVVARKMLVEMPHPYKQKLTVIGSPIKMSRTPVEYRRAPPTLGEHTEQILS 387
Query: 121 DLLNYDETTIAKLKEKKILGLIE 143
+ + + LK+ K G+IE
Sbjct: 388 RVASQEH-----LKKLKAEGIIE 405
>gi|421746223|ref|ZP_16184031.1| L-carnitine dehydratase/bile acid-inducible protein F [Cupriavidus
necator HPC(L)]
gi|409775201|gb|EKN56716.1| L-carnitine dehydratase/bile acid-inducible protein F [Cupriavidus
necator HPC(L)]
Length = 407
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 138/282 (48%), Positives = 186/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
L+++++LDLTRI+AGP+ T LAD+GAEVIKVE+P GD+ R WGPPFL + T S
Sbjct: 5 LAHIKVLDLTRILAGPWATQNLADMGAEVIKVERPRVGDDTRAWGPPFLKDAQGRETADS 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+YF NR KKS+ VD PEGQQII++LA++ DV+VEN+ G L R LGY L +N
Sbjct: 65 SYFLSANRGKKSITVDLAAPEGQQIIRELAREADVVVENYKVGTLARYGLGYDDLRALNP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
+L+YCS+TGFG GPY PGYD + +GGL+ ITG PD G P K GIA DL TG
Sbjct: 125 RLVYCSITGFGQSGPYAALPGYDFVFQGMGGLMSITGLPDDEPGGGPIKSGIAITDLLTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA A++AAL H+ +G+GQ ID LL V++ NY +G +R G +H+N+V
Sbjct: 185 MYASTAILAALEHRNVSGEGQYIDMALLDCVVTINSYQAINYFLSGKVPQRMGNAHSNMV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+QVF+ G V + G+D QY +C+V+ LA DPR+ +
Sbjct: 245 PYQVFRCREGDVIVAVGNDAQYAALCEVIGRPELAADPRFTS 286
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+V+ LA DPR+ + R NRE L +I + +T EW+ + + P +
Sbjct: 269 LCEVIGRPELAADPRFTSAGQRNRNREALIPQIAEAMLARTMTEWVERMEAANVPCGPIY 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ QVF DE ++ + + H + + S T + P LGEHT+ VL+
Sbjct: 329 DMEQVFEDEQVRHRGMQLSLPHGAGVQAPGLANPIRLSATPIQYERAAPTLGEHTETVLR 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
D L +D+ + L+ K ++
Sbjct: 389 DKLGFDKARLDALRAKGVI 407
>gi|395800191|ref|ZP_10479470.1| putative CoA-transferase [Pseudomonas sp. Ag1]
gi|395336033|gb|EJF67895.1| putative CoA-transferase [Pseudomonas sp. Ag1]
Length = 406
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 190/294 (64%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWAGQILADLGAEVIKVERPGNGDDTRAWGPPFLKDAYGENTTEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ++++DLA + D+L+ENF G L L Y+ L E+N
Sbjct: 64 AYYLSANRNKESVTIDFTRPEGQKLVRDLAAKSDILIENFKVGGLAAYGLDYESLKELNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 ELIYCSITGFGQTGPYATRAGYDFMIQGLGGLMSLTGRPEGEDGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AA+ H+ G GQ ID LL QV+ L N N+L G+ KR G +H N+V
Sbjct: 184 LYSTVAILAAMAHRDHDGGGQHIDMALLDVQVACLANQAMNFLTTGVSPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ T L +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAEVAGQPQWADDPRFATNKLRVANRAVLI 297
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 70/139 (50%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ T LRV NR +L I T+ K+T EW+ + V P +N
Sbjct: 268 FAEVAGQPQWADDPRFATNKLRVANRAVLIPLIRQATVFKSTAEWVAQLERVGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD ++ L ++ H G + V + S T E R+ PP LGEHT VL+
Sbjct: 328 DLAQVFADPQVKARGLAMQLPHALAGTVPQVASPMRLSKTPVEYRSAPPLLGEHTHQVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L ++ L+E ++
Sbjct: 388 QVLGLTPANVSALREAGVI 406
>gi|419952865|ref|ZP_14469011.1| putative lipid metabolism-like protein [Pseudomonas stutzeri TS44]
gi|387970141|gb|EIK54420.1| putative lipid metabolism-like protein [Pseudomonas stutzeri TS44]
Length = 407
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 140/294 (47%), Positives = 188/294 (63%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
LS++R+LDL+R++AGP+C +L DLGAEVIKVE+P TGD+ R WGPP+L NT +
Sbjct: 5 LSHLRVLDLSRVLAGPWCGQILGDLGAEVIKVERPGTGDDTRHWGPPYLQDQHGENTSEA 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+S+ VDF PEGQ+II++L Q DVL+ENF G L L Y LS IN
Sbjct: 65 AYYLSANRNKQSLTVDFTQPEGQRIIRELVMQSDVLLENFKVGGLAAYGLDYASLSAINP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG D P KVG+A D+ TG
Sbjct: 125 RLIYCSITGFGQDGPYAARAGYDFMIQGLGGLMSLTGRSDAEEGAGPVKVGVALTDILTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA V+AAL H+ +TG+GQ +D LL QV+ L N NYL + KR G +H N+V
Sbjct: 185 LYATVGVLAALAHRERTGEGQHVDTALLDVQVACLGNQALNYLTTDVAPKRMGNAHPNIV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ C+V A DPR+ + +A + LI
Sbjct: 245 PYQDFPTADGDFILTVGNDGQFRKFCEVAGRPEWADDPRFASNRARVAHRAELI 298
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 65/139 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V A DPR+ + RV +R L I T+ +TT EW+ + P +N
Sbjct: 269 FCEVAGRPEWADDPRFASNRARVAHRAELIPLIRQATVFRTTAEWVSALEQAGVPCGPIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD +Q L E+ H + V + S + R PPP LGEH+ +L+
Sbjct: 329 DLAQVFADPQVQHRGLKVEMPHPLASHVPQVASPLRLSASPVSYRRPPPLLGEHSAALLE 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
LL I L++ ++
Sbjct: 389 RLLRLQPAQIGALRDAGVI 407
>gi|358373391|dbj|GAA89989.1| CAIB/BAIF family enzyme [Aspergillus kawachii IFO 4308]
Length = 443
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 133/283 (46%), Positives = 190/283 (67%), Gaps = 7/283 (2%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE---- 269
+LPL +R+LD+TR++AGP+CT +L DLGA+VIKVE PV GD+ R WGPP+ T+
Sbjct: 39 TLPLKGIRVLDMTRVLAGPYCTQILGDLGADVIKVEHPVRGDDTRAWGPPYATYTDGSEG 98
Query: 270 --LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLS 327
S Y+ VNRNKKS+ + F G +I+ LAK+CDVLVEN++PG L + N+ Y+ L
Sbjct: 99 PGESAYYLGVNRNKKSIGLSFAHKSGVEILHRLAKECDVLVENYLPGSLKKYNMDYETLR 158
Query: 328 EINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATG 387
IN +LIY S+TG+G GPY +R GYD++ + GL+HITG +G P KVG+A DL TG
Sbjct: 159 SINPRLIYASITGYGQTGPYSNRAGYDVMVEAEMGLMHITGSREGEPVKVGVAVTDLTTG 218
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAG-IEGKRWGTSHANV 446
LY A+MAALL + +TGKGQ ID L QV+ L N+ ++ L +G + RWGT+H ++
Sbjct: 219 LYTSNAIMAALLARARTGKGQHIDACLSDCQVATLANIASSALISGKKDSGRWGTAHPSI 278
Query: 447 VPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
VP++ +KT +G + G G+D+ + +C + DPR++T
Sbjct: 279 VPYRSYKTLDGDILFGGGNDRLFGVLCDRLGHPEWKTDPRFVT 321
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 79/139 (56%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + DPR++T + RV++R + IE +KTT+EWL I +G PYA VN
Sbjct: 304 LCDRLGHPEWKTDPRFVTNSDRVKHRTDIDGLIEETVKQKTTQEWLEILEGSGMPYAAVN 363
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I H+Q +V E+ H G IK+V + YS P +RTPPP LG+HTD +L
Sbjct: 364 DIQGTLNHSHVQARGMVTEVDHPACGPIKLVNTPIKYSHATPGIRTPPPTLGQHTDEILG 423
Query: 121 DLLNYDETTIAKLKEKKIL 139
++L Y + IA+LK+ ++
Sbjct: 424 EVLEYGKDDIARLKKDGVV 442
>gi|384919027|ref|ZP_10019089.1| acyl-CoA transferase/carnitine dehydratase [Citreicella sp. 357]
gi|384467110|gb|EIE51593.1| acyl-CoA transferase/carnitine dehydratase [Citreicella sp. 357]
Length = 404
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 130/275 (47%), Positives = 178/275 (64%), Gaps = 2/275 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPF--LNNTELSTYF 274
L +R+LDL+R++AGP+ T +L DLGAEVIKVE+P GD+ R WGPP + S Y+
Sbjct: 5 LDGIRVLDLSRVLAGPWATQILGDLGAEVIKVERPGKGDDTRGWGPPSTEIEGQSFSAYY 64
Query: 275 TCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLI 334
NRNK+S+ +D PEG +++ LA + DVLVENF G L R L Y L +N +L+
Sbjct: 65 LVCNRNKQSIAIDISNPEGAALVRQLAAESDVLVENFKTGGLARYGLDYDSLRAVNPRLV 124
Query: 335 YCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAV 394
YCSVTGFG GPY R GYD + +GGL+ +TG P KVG+ IDL TGLYA A+
Sbjct: 125 YCSVTGFGQTGPYAQRGGYDFLIQGMGGLMSVTGETAAAPVKVGVPVIDLFTGLYATIAI 184
Query: 395 MAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKT 454
AAL H+ +TG+GQ IDC LL T V++L N G N+L G+ G +H NVVP++ F
Sbjct: 185 QAALRHRDQTGEGQHIDCALLDTSVAILANQGMNWLIGGVTPSPMGNAHPNVVPYRTFAA 244
Query: 455 SNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
S+G++ + G+D Q+ +C+V+ + L +P YLT
Sbjct: 245 SDGHLIVAVGNDGQFAALCRVLGREDLGANPDYLT 279
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 1/122 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+V+ + L +P YLT R NR L E+E + +T+ + L + P +N
Sbjct: 262 LCRVLGREDLGANPDYLTNECRNRNRATLEPELEREIAARTSADLLAAMEAEGVPGGPIN 321
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+++VFAD +Q +V ++ +I P V S +R PPALG VL+
Sbjct: 322 RVNEVFADPQVQARGMVAPVAMGGAETPQIRFPPV-LSKAPATIRRAPPALGADGVEVLQ 380
Query: 121 DL 122
+
Sbjct: 381 GM 382
>gi|440719729|ref|ZP_20900152.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
syringae BRIP34876]
gi|440728266|ref|ZP_20908485.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
syringae BRIP34881]
gi|440362373|gb|ELP99573.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
syringae BRIP34881]
gi|440366969|gb|ELQ04038.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
syringae BRIP34876]
Length = 406
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 135/294 (45%), Positives = 192/294 (65%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
LS++R+LDL+R++AGP+ +LADLGA+VIK+E+P GD+ R WGPPFL NT +
Sbjct: 4 LSHIRVLDLSRVLAGPWAGQILADLGADVIKIERPGCGDDTRSWGPPFLQDAAGQNTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++++LA + D+++ENF L L Y+ L +N
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQRLVRELAAKSDIVIENFKVDGLAACGLDYESLKAVNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY RPGYD + ++GGL+ +TG PDG P KVG+A D+ TG
Sbjct: 124 RLIYCSITGFGQSGPYARRPGYDFMIQALGGLMSLTGLPDGEEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ ++ GQ ID LL QV+ L N NYL G+ KR G +H N+V
Sbjct: 184 LYSTTAILAALAHRDQSDIGQYIDMALLDVQVACLANQAMNYLTTGVAPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + + G+D Q++ V A DPR+LT L +A + LI
Sbjct: 244 PYQDFPTADGDLILTVGNDSQFRKFAAVAGQPQWAEDPRFLTNKLRVAHRAELI 297
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 65/139 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
V A DPR+LT LRV +R L I T+ K T +W+ + P VN
Sbjct: 268 FAAVAGQPQWAEDPRFLTNKLRVAHRAELIPLIRQVTVFKATAQWVSELEAAGVPCGPVN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+++VFAD H+ L E+ H G + V + S T E PP LGEHT VL+
Sbjct: 328 DLARVFADPHVVARGLAIELPHALAGRVPQVASPIRLSETPVEYTRAPPLLGEHTAQVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
LL E + L+E +L
Sbjct: 388 ALLGIGEEELTLLREAGVL 406
>gi|427411705|ref|ZP_18901907.1| hypothetical protein HMPREF9718_04381 [Sphingobium yanoikuyae ATCC
51230]
gi|425709995|gb|EKU73018.1| hypothetical protein HMPREF9718_04381 [Sphingobium yanoikuyae ATCC
51230]
Length = 417
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 128/281 (45%), Positives = 182/281 (64%), Gaps = 6/281 (2%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE------L 270
L +++LDL+R++AGP+ T +LAD GA+VIK+E P GD+ R WGPPFL +
Sbjct: 6 LEGIKVLDLSRVLAGPWSTQILADFGADVIKIELPGHGDDTRAWGPPFLTGADGQPEIGT 65
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
S Y+ NRNK+S ++ TP+G ++I+ LA + D+LVENF G L + L Y L IN
Sbjct: 66 SAYYLSCNRNKRSAAINLATPQGAELIRRLAAEADILVENFKVGGLSKYGLDYASLKAIN 125
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYA 390
+L+YCS+TGFG GPY DR GYD +A +GG + ITG DG P + G+A DL+TG++A
Sbjct: 126 PRLVYCSITGFGQTGPYADRGGYDFVAQGMGGFMSITGEEDGGPLRAGVAMADLSTGMFA 185
Query: 391 HGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQ 450
+++AAL H +TG+GQ+ID +LL TQ++ML N G N+L GI R G H VVP++
Sbjct: 186 TVSILAALRHAERTGEGQQIDVSLLDTQIAMLANQGMNWLVGGIVPGRLGNRHPTVVPYK 245
Query: 451 VFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
F+ ++G + I G+D+Q++ C M L DP Y T A
Sbjct: 246 TFEVADGMMIIAIGNDRQFRAFCTEMGHGELGTDPLYATSA 286
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 61/137 (44%), Gaps = 7/137 (5%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C M L DP Y T A R+ NR+ + +++ ++ + F P VN
Sbjct: 267 FCTEMGHGELGTDPLYATSAQRLINRDAIEAKVQEIVRPFARDDLMARFVAAGVPAGPVN 326
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAY----SLTQPEVRTPPPALGEHTD 116
SI VF D I + V E+ G ++I P VAY S T + R PP +GEH+
Sbjct: 327 SIQDVFEDPFIDARQTVHRYRREEDG-VEI--PTVAYPGKLSTTPADYRHCPPRVGEHSR 383
Query: 117 YVLKDLLNYDETTIAKL 133
+L + L D+ + L
Sbjct: 384 EILGEWLGLDDGALDAL 400
>gi|229587693|ref|YP_002869812.1| putative CoA-transferase [Pseudomonas fluorescens SBW25]
gi|229359559|emb|CAY46400.1| putative CoA-transferase [Pseudomonas fluorescens SBW25]
Length = 406
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 138/294 (46%), Positives = 189/294 (64%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIKVE+P +GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWSGQILADLGAEVIKVERPGSGDDTRAWGPPFLKDAYGENTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ ++++LA + D+L+ENF G L L Y+ L EIN
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQALVRELAAKSDILIENFKVGGLAAYGLDYESLKEINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 ELIYCSITGFGQTGPYATRAGYDFMIQGLGGLMSLTGRPEGDEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ G GQ ID LL QV+ L N NYL G KR G +H N+V
Sbjct: 184 LYSTVAILAALAHRDHDGGGQHIDMALLDVQVACLANQAMNYLTTGASPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ T + +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAEVAGRPQWADDPRFSTNKVRVANRAELI 297
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 66/139 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ T +RV NR L I T+ KTT EW+ + V P +N
Sbjct: 268 FAEVAGRPQWADDPRFSTNKVRVANRAELIPLIRQATVFKTTAEWVSQLERVGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVF D ++ L + H G + V + S T E R+ PP LGEHT VL+
Sbjct: 328 DLAQVFDDPQVKARGLAMALPHALAGMVPQVASPIRLSKTPVEYRSAPPLLGEHTAEVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
++L + LK ++
Sbjct: 388 EVLGLGMANVVALKAAGVI 406
>gi|261194138|ref|XP_002623474.1| CAIB/BAIF family enzyme [Ajellomyces dermatitidis SLH14081]
gi|239588488|gb|EEQ71131.1| CAIB/BAIF family enzyme [Ajellomyces dermatitidis SLH14081]
Length = 450
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 132/299 (44%), Positives = 193/299 (64%), Gaps = 8/299 (2%)
Query: 198 YENFYSLDLALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDEC 257
+ +F + A + +LPL+ +R+LD++R++AGP+CT +L DLGAE+IK+E PV GD+
Sbjct: 29 WRSFATTATASTQNAENLPLAGIRVLDMSRVLAGPYCTQILGDLGAEIIKIEHPVRGDDT 88
Query: 258 RKWGPPFLNNTE-------LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVEN 310
R WGPPF + S Y+ VNRNKKS+ + F P G +I+ L K+CDVLVEN
Sbjct: 89 RAWGPPFAKYKDGTKEGPGESAYYLSVNRNKKSLGLSFAHPSGVEILHKLVKECDVLVEN 148
Query: 311 FVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHP 370
++PG L + + Y + IN +LIY S+TG+G GPY R GYD++ + GL+HITG
Sbjct: 149 YIPGSLKKYKMDYDTVKAINPKLIYASITGYGQTGPYSQRAGYDVMVEAEMGLMHITGSR 208
Query: 371 DGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYL 430
DGPP KVG+A DL TGLY A+MAALL + +TGKGQ ID L QV+ L N+ ++ L
Sbjct: 209 DGPPVKVGVAVTDLTTGLYTSNAIMAALLGRARTGKGQHIDACLSDCQVATLSNLASSAL 268
Query: 431 NAG-IEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYL 488
+G + RWGT+H ++VP++ +KT +G + +G G+DK + +C + D R++
Sbjct: 269 ISGEKDSGRWGTAHPSIVPYRAYKTKDGDILLGGGNDKLFGVLCDRLGQPEWKADERFV 327
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 83/139 (59%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + D R++ LRV+NR++L K IE +T ++TT+EWL I +G PY+ +N
Sbjct: 311 LCDRLGQPEWKADERFVRNNLRVKNRDVLDKMIEDRTRQRTTQEWLEILEGSGMPYSAIN 370
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I H+ +V E+ H G +K+V + YS +P VRTPPP LG+H+D VL+
Sbjct: 371 DIQGTLNHSHVLARDMVVEVDHPTCGPMKLVNTPIKYSDAKPGVRTPPPTLGQHSDEVLR 430
Query: 121 DLLNYDETTIAKLKEKKIL 139
DL++ E IA+LK+ ++
Sbjct: 431 DLVDLGENEIAQLKKDGVV 449
>gi|89902827|ref|YP_525298.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhodoferax
ferrireducens T118]
gi|89347564|gb|ABD71767.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhodoferax
ferrireducens T118]
Length = 426
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 134/289 (46%), Positives = 192/289 (66%), Gaps = 9/289 (3%)
Query: 213 PSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NN 267
P+ LS++++LDL+R++AGP+CT +LADLGA+VIKVE+P GD+ R WGPPFL N+
Sbjct: 11 PAGALSHLKVLDLSRVLAGPWCTQMLADLGADVIKVERPGAGDDTRHWGPPFLKDADGND 70
Query: 268 TELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLS 327
T +TYFT NRNK+++ +D PEGQ +I+ LA Q D+LVENF G L + L ++ L
Sbjct: 71 TTQATYFTACNRNKRAITLDMAKPEGQALIRQLALQSDILVENFKVGGLKQYGLDFESLH 130
Query: 328 EINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASID 383
IN +LIYCSVTGFG GPY +R GYD++ ++ GL+ ITG P G P +VG+A ID
Sbjct: 131 AINPRLIYCSVTGFGQDGPYAERAGYDLMIQAMSGLMSITGEADATPGGGPMRVGVAVID 190
Query: 384 LATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSH 443
+ TG+YA A++AAL +++TG+GQ ID LL +++L N A YLN G +R G +H
Sbjct: 191 IFTGVYATSAILAALEVRHRTGQGQHIDMALLDVGMAVLGNQAAGYLNTGAVPQRQGNTH 250
Query: 444 ANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
++ P+Q F T +G + + G+D Q+ C+ A DPR+ + L
Sbjct: 251 PSLAPYQTFPTLDGAMLLAVGNDGQFARFCQAAEHPEWASDPRFASNTL 299
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 10/132 (7%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+ A DPR+ + LRV++R+ L ++A T +TT +W+ + + + P +N
Sbjct: 279 FCQAAEHPEWASDPRFASNTLRVKHRDALIPALQALTQTRTTAQWVALLEDKAVPCGPIN 338
Query: 61 SISQVFADEHIQDIKLV----------KEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPA 110
+ Q FAD +Q LV + + + +I V + + T P +R PP+
Sbjct: 339 DLGQAFADAQVQARGLVVNQAVATVNTAQSAIKHIANIVTVASPLRLTATPPVLRRAPPS 398
Query: 111 LGEHTDYVLKDL 122
LG+HT+ VL +L
Sbjct: 399 LGQHTEEVLAEL 410
>gi|222109372|ref|YP_002551636.1| l-carnitine dehydratase/bile acid-inducible protein f [Acidovorax
ebreus TPSY]
gi|221728816|gb|ACM31636.1| L-carnitine dehydratase/bile acid-inducible protein F [Acidovorax
ebreus TPSY]
Length = 450
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 142/311 (45%), Positives = 202/311 (64%), Gaps = 14/311 (4%)
Query: 194 KISLYENFYSLDLALSSENPSL----PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVE 249
++ L ++ S+ SS +P L ++R+LDL+R++AGP+CT LAD+GA+VIK+E
Sbjct: 13 RLPLGKHRLSMTTPDSSSSPGAGRAGALGHLRVLDLSRVLAGPWCTQNLADMGADVIKIE 72
Query: 250 QPVTGDECRKWGPPFLNN-----TELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQC 304
+P GD+ R WGPPF + +E + YF NRNK+SV VD TPEGQ++I++LA+Q
Sbjct: 73 KPGDGDDTRHWGPPFFPDADGQPSEHACYFAACNRNKRSVTVDMATPEGQRLIRELAQQS 132
Query: 305 DVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLL 364
DV+VENF G L R L Y+ LS +N +LIYCSVTGFG GPY R GYD++ ++ GL+
Sbjct: 133 DVVVENFKTGGLKRYGLDYESLSALNPRLIYCSVTGFGHTGPYAPRAGYDLLIQAMSGLM 192
Query: 365 HITGH----PDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVS 420
+TGH P G P +VG+A IDL TG+YA A++ AL +++TG+GQ ID LL ++
Sbjct: 193 SVTGHADGEPGGGPMRVGVAVIDLFTGMYATTAILGALEARHRTGRGQHIDMALLDVAMA 252
Query: 421 MLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQH 480
+L N GA +LNAG KR G +H +VVP+Q F T +G + + G+D Q+ C+
Sbjct: 253 VLANQGAGFLNAGNIPKRQGNTHPSVVPYQDFPTQDGNMLLAIGNDGQFARFCEAAGTD- 311
Query: 481 LALDPRYLTGA 491
A D R+ T A
Sbjct: 312 WAGDERFATNA 322
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 13/140 (9%)
Query: 11 ALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEH 70
A D R+ T A RV +RE L + A T + T W+ + + + P +N + Q F D
Sbjct: 313 AGDERFATNAGRVTHRETLIPLMAALTRTRPTAAWIALLEDKAVPCGPINHVGQAFDDAQ 372
Query: 71 IQDIKLVKEISHEKY-------GDI--KIVGPAVAYSLTQPEV--RTPPPALGEHTDYVL 119
++ L + ++Y G++ ++V A L+ V R PP LG+HTD VL
Sbjct: 373 VRARGL--RVEQQRYPGAQPPAGEVVNRVVTTASPLRLSDTPVTLRYAPPPLGQHTDEVL 430
Query: 120 KDLLNYDETTIAKLKEKKIL 139
++ L D + L+ +++L
Sbjct: 431 RERLGLDAAQLQALRAQRVL 450
>gi|392376069|ref|YP_003207902.1| L-carnitine dehydrogenase [Candidatus Methylomirabilis oxyfera]
gi|258593762|emb|CBE70103.1| putative L-carnitine dehydrogenase [Candidatus Methylomirabilis
oxyfera]
Length = 396
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 125/271 (46%), Positives = 183/271 (67%), Gaps = 2/271 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L +R+LDL+R +AGP+C M+L DLGAEVIK+E+P GDE R WGPPF S Y+ C
Sbjct: 5 LDGIRVLDLSRHLAGPYCAMMLGDLGAEVIKIERPGVGDESRHWGPPFFGGE--SAYYLC 62
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
NRNK+S+ ++ K G I ++LA++ DV++ENF G LD+L +GY+ L IN +L+YC
Sbjct: 63 CNRNKQSLTLNLKHERGVAIARELARRSDVVIENFRVGVLDQLGVGYEDLKAINPRLVYC 122
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S++GFG GP ++ GYD + S GGL+ ITG PDG P KVG+A D+ GL+A A++A
Sbjct: 123 SISGFGYTGPDRELGGYDFLIQSRGGLMSITGEPDGSPMKVGVAIADMTAGLFASNAILA 182
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
ALL + +TG GQ +D L +Q++ L N +NYL +G RWG +H ++VP++ F+ ++
Sbjct: 183 ALLARERTGAGQHLDIALYDSQIACLANAASNYLCSGEVPGRWGNAHGSIVPYEAFQAAD 242
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
Y+ + G+D+Q+Q C V + A DPR+
Sbjct: 243 DYLILAIGNDEQWQRFCAVAGVAAWATDPRF 273
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 69/139 (49%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C V + A DPR+ RV NR +L ++ KT EWL + P VN
Sbjct: 258 FCAVAGVAAWATDPRFAANPERVANRAVLVPLVQGLLRSKTVAEWLQLCADADVPAGPVN 317
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I +VFAD + ++ ++ H G +++ G + S T ++R PP LGEHTD +L
Sbjct: 318 TIDKVFADPQVAARGMIVQMPHPTLGTVRLAGTPLNLSATPAQMRLSPPLLGEHTDAILA 377
Query: 121 DLLNYDETTIAKLKEKKIL 139
LL DE IA+L ++
Sbjct: 378 RLLALDERAIAELHRDGVV 396
>gi|14587414|dbj|BAB61747.1| L-carnitine dehydrogenase-like protein [Acinetobacter sp.
NCIMB9871]
Length = 405
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 137/285 (48%), Positives = 188/285 (65%), Gaps = 9/285 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L +R+LDL+R++AGP+C +LADLGAEVIKVE+P TGD+ R WGPP++ +T+ +
Sbjct: 4 LEGIRVLDLSRVLAGPWCGQILADLGAEVIKVERPKTGDDTRLWGPPWMKDDQGEDTQEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK S+ +D T EGQ++++ LA DVL+EN+ G L + L Y L IN
Sbjct: 64 AYYQSANRNKLSIAIDIATLEGQKLVRTLAAGSDVLIENYKAGSLKKYGLDYDSLKAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TGFG GP PGYD I +GGL+ +TG P G P KVG+A DL TG
Sbjct: 124 KLVYCSITGFGQTGPRAPEPGYDFIIQGMGGLMSVTGEKDDLPGGGPQKVGVAFADLTTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA A+ A+LL++ TG GQ ID LL QV+ L N G NYL++G R+G +HAN+V
Sbjct: 184 LYATIAIQASLLNRTMTGLGQYIDMALLDVQVATLANQGMNYLSSGKVPGRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
P+QVFK ++ I G+DKQ+ +C+ + L L DPR+L+ AL
Sbjct: 244 PYQVFKAADQDFIIACGNDKQFVALCQAIGLPELQNDPRFLSNAL 288
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 73/140 (52%), Gaps = 2/140 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + L L DPR+L+ ALR+++R+ + K + + W+ + P +N
Sbjct: 268 LCQAIGLPELQNDPRFLSNALRIQHRQEMDKLLGTHFKTNSARHWVDAIHTIKVPVGLIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q F + + ++ ++ H + ++G + S T E + PP LGEHTD +L
Sbjct: 328 NLQQAFEEPQVIARNMLVDMKHPLKEKLTVIGSPIKLSRTPVEYKKAPPMLGEHTDEILS 387
Query: 121 DLLNYDETTIAKLKEKKILG 140
+L D IA+L+++ I+G
Sbjct: 388 GIL--DAEKIAELRQRGIIG 405
>gi|422322697|ref|ZP_16403737.1| hypothetical protein HMPREF0005_00101 [Achromobacter xylosoxidans
C54]
gi|317402342|gb|EFV82916.1| hypothetical protein HMPREF0005_00101 [Achromobacter xylosoxidans
C54]
Length = 409
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 135/294 (45%), Positives = 187/294 (63%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
L +R+LDL+RI+AGP+CT LADLGA+VIK+E+P GD+ R WGPPFL + T S
Sbjct: 7 LDGIRVLDLSRILAGPWCTQNLADLGADVIKIERPGVGDDTRAWGPPFLKDGNGVDTNES 66
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV D TP G +I++LA D+LVENF G L + L Y L IN
Sbjct: 67 AYYLSANRNKRSVEADMATPHGAALIRELAAVSDILVENFKVGGLAKYGLDYASLKAINP 126
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+LIYCSVTGFG GP+ RPGYD + +GGL+ ITG P G P K G+A D+ TG
Sbjct: 127 RLIYCSVTGFGQDGPFARRPGYDFMIQGMGGLMSITGERDDLPGGGPQKAGVAVTDIVTG 186
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA A++AAL ++++G GQ +D LL + +++L N +NY N+G+ R G +H NVV
Sbjct: 187 MYATVAILAALQERHRSGLGQHLDIALLDSHMALLANQNSNYFNSGVAPTRAGNAHQNVV 246
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+QVF S+G++ + TG++ QY+ C + L DPR+ T L + L+
Sbjct: 247 PYQVFAASDGHLIVATGNESQYRAYCAAIGAPELGDDPRFATNRLRVTNRDELV 300
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 63/132 (47%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C + L DPR+ T LRV NR+ L + A + ++W+ + V P +N+
Sbjct: 272 CAAIGAPELGDDPRFATNRLRVTNRDELVGILAAIMRQGRRDDWIAKLEAVGVPCGPINN 331
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
I+Q FA Q +L +++ H G + + +S + R PP LG+HT+ VL+D
Sbjct: 332 IAQAFAHPQAQARQLRRDLPHPGGGVAPVTASPLRFSASPVVYRRAPPLLGQHTEEVLRD 391
Query: 122 LLNYDETTIAKL 133
+L IA
Sbjct: 392 VLGKSPQAIAAF 403
>gi|169796359|ref|YP_001714152.1| L-carnitine dehydrogenase [Acinetobacter baumannii AYE]
gi|213156905|ref|YP_002318950.1| L-carnitine dehydrogenase [Acinetobacter baumannii AB0057]
gi|215483820|ref|YP_002326045.1| CoA-transferase family III family protein [Acinetobacter baumannii
AB307-0294]
gi|301347703|ref|ZP_07228444.1| CoA-transferase family III family protein [Acinetobacter baumannii
AB056]
gi|301510468|ref|ZP_07235705.1| CoA-transferase family III family protein [Acinetobacter baumannii
AB058]
gi|332851985|ref|ZP_08433852.1| III protein, CoA-transferase family [Acinetobacter baumannii
6013150]
gi|332871716|ref|ZP_08440176.1| III protein, CoA-transferase family [Acinetobacter baumannii
6013113]
gi|417572931|ref|ZP_12223785.1| CoA-transferase family III protein [Acinetobacter baumannii Canada
BC-5]
gi|421623556|ref|ZP_16064440.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC074]
gi|421645288|ref|ZP_16085756.1| CoA-transferase family III protein [Acinetobacter baumannii IS-235]
gi|421645543|ref|ZP_16086008.1| CoA-transferase family III protein [Acinetobacter baumannii IS-251]
gi|421660632|ref|ZP_16100821.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-83]
gi|421701003|ref|ZP_16140513.1| CoA-transferase family III protein [Acinetobacter baumannii IS-58]
gi|421797610|ref|ZP_16233651.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-21]
gi|421799715|ref|ZP_16235705.1| CoA-transferase family III protein [Acinetobacter baumannii Canada
BC1]
gi|169149286|emb|CAM87169.1| L-carnitine dehydrogenase [Acinetobacter baumannii AYE]
gi|213056065|gb|ACJ40967.1| L-carnitine dehydrogenase [Acinetobacter baumannii AB0057]
gi|213987693|gb|ACJ57992.1| CoA-transferase family III family protein [Acinetobacter baumannii
AB307-0294]
gi|332729562|gb|EGJ60900.1| III protein, CoA-transferase family [Acinetobacter baumannii
6013150]
gi|332731284|gb|EGJ62581.1| III protein, CoA-transferase family [Acinetobacter baumannii
6013113]
gi|400208499|gb|EJO39469.1| CoA-transferase family III protein [Acinetobacter baumannii Canada
BC-5]
gi|404568601|gb|EKA73699.1| CoA-transferase family III protein [Acinetobacter baumannii IS-58]
gi|408503129|gb|EKK04905.1| CoA-transferase family III protein [Acinetobacter baumannii IS-235]
gi|408518415|gb|EKK19940.1| CoA-transferase family III protein [Acinetobacter baumannii IS-251]
gi|408692906|gb|EKL38519.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC074]
gi|408704127|gb|EKL49501.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-83]
gi|410396539|gb|EKP48806.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-21]
gi|410409256|gb|EKP61189.1| CoA-transferase family III protein [Acinetobacter baumannii Canada
BC1]
Length = 405
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 134/284 (47%), Positives = 190/284 (66%), Gaps = 9/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ +T+ +
Sbjct: 4 LNGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPKVGDDTRSWGPPWMKDDSGQDTQEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK SV +D + EGQ++IK L + DV++EN+ G L + L Y+ LS IN
Sbjct: 64 AYYQSTNRNKLSVAIDIASSEGQELIKALIQDTDVVIENYKAGSLKKYGLDYESLSAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TGFG GP + PGYD I +GGL+ +TG P G P KVG+A DLATG
Sbjct: 124 ELVYCSITGFGQTGPRAEEPGYDFIIQGMGGLMSVTGERDDLPGGGPQKVGVAFSDLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL+++ TG GQ ID LL Q++ + N G NYL++G KR+G +HAN+V
Sbjct: 184 LYSTIAIQAALLNRHVTGLGQYIDMALLDVQIATMANQGMNYLSSGNIPKRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P+QVFK S+ I G+D Q+ +C+ + L L DPR+ A
Sbjct: 244 PYQVFKASDRDFIIACGNDTQFIQLCRSIGLPDLPNDPRFARNA 287
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 79/140 (56%), Gaps = 2/140 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + L L DPR+ A R+++R+ + ++ + KT +EW+ P +N
Sbjct: 268 LCRSIGLPDLPNDPRFARNADRIKHRDEIIGILQTHFLTKTADEWVDAIYAAKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q F + + +++ E++H + +K++G + S T E +T PP LGEHT VL
Sbjct: 328 NLEQAFEEPQVIAREMLVEMNHPQREKLKVIGSPIKLSRTPVEYKTAPPLLGEHTQAVLG 387
Query: 121 DLLNYDETTIAKLKEKKILG 140
+++ ++ +A+LKEK ++G
Sbjct: 388 RIVSSEK--LAELKEKGVIG 405
>gi|421857067|ref|ZP_16289423.1| putative CoA-transferase [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
gi|403187539|dbj|GAB75624.1| putative CoA-transferase [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
Length = 405
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 135/280 (48%), Positives = 187/280 (66%), Gaps = 9/280 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
L+ +R+LDL+R++AGP+C +LADLGAEVIKVE+P GD+ R WGPP++ N T +
Sbjct: 4 LTGIRVLDLSRVLAGPWCGQILADLGAEVIKVERPQHGDDTRSWGPPWMKNDAGDDTREA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK SV +D + EGQ++IK L + DV++EN+ G L + L Y L+ IN
Sbjct: 64 AYYQSANRNKLSVAIDIASLEGQELIKALIQDTDVVIENYKTGSLKKYGLDYDSLAAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
QL+YCS+TGFG GP + PGYD I +GGL+ +TG P G P KVG+A DLATG
Sbjct: 124 QLVYCSITGFGQDGPRAEEPGYDFIIQGMGGLMSVTGEKDDLPGGGPQKVGVAFSDLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL++++TG GQ ID LL Q++ L N G NYL +G R+G +HAN+V
Sbjct: 184 LYSTIAIQAALLNRHETGLGQYIDMALLDVQIATLANQGMNYLASGKVPGRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
P+QVFK ++ I G+DKQ+ +C+ + L L DPR+
Sbjct: 244 PYQVFKAADRDFIIACGNDKQFIQLCQSIGLAELPNDPRF 283
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 73/143 (51%), Gaps = 5/143 (3%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + L L DPR+ A R+++R + + ++KT +EW+ V P +N
Sbjct: 268 LCQSIGLAELPNDPRFSRNADRIKHRTEIIDILSKHFLKKTADEWVTAIHAVKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q F + + K++ E+ H + ++G + S T E R PP LGEHT+ +L+
Sbjct: 328 NLEQAFREPQVIARKMLVEMPHPYKQKLTVIGSPIKMSRTPVEYRRAPPTLGEHTEQILR 387
Query: 121 DLLNYDETTIAKLKEKKILGLIE 143
+ + + LK+ K G+IE
Sbjct: 388 RVASQEH-----LKKLKAEGIIE 405
>gi|332286721|ref|YP_004418632.1| acyl-CoA transferase/carnitine dehydratase [Pusillimonas sp. T7-7]
gi|330430674|gb|AEC22008.1| acyl-CoA transferase/carnitine dehydratase [Pusillimonas sp. T7-7]
Length = 412
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 131/274 (47%), Positives = 183/274 (66%), Gaps = 2/274 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL+ +R+LDL+R++AGP+CT +ADLGAEV K+E P GD+ R W PP L+ STYF
Sbjct: 19 PLAGIRVLDLSRVLAGPWCTQTMADLGAEVWKIEAPGQGDDTRSWLPPDLDGE--STYFM 76
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
C NR+K+S+ V+FK PEGQ +++ LA+Q DVLVEN+ G L++ L Y LS +N +LIY
Sbjct: 77 CTNRSKQSMAVNFKHPEGQALLRQLAQQADVLVENYRLGALEKFGLDYDTLSALNPRLIY 136
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS++G+G GP PGYD + + GL+ ITG G P K+G+A DL TG+ A AV+
Sbjct: 137 CSISGYGRTGPRASEPGYDFVIQAESGLMSITGEEPGDPMKLGVAITDLVTGMNAVQAVL 196
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
AAL + ++G+GQ ID LL VS+L N+G YL AG +R+G H VVP+Q+ T+
Sbjct: 197 AALFARERSGRGQLIDLALLDGAVSVLANIGVGYLAAGHSPERFGNGHPTVVPYQIMSTA 256
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+G + G+D+Q+ +C V+ LALD RY T
Sbjct: 257 DGRFALAVGNDRQFSALCTVLERSDLALDERYRT 290
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 63/139 (45%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C V+ LALD RY T RV NR L E+E +T WL + P V
Sbjct: 273 LCTVLERSDLALDERYRTNRNRVLNRSTLIPELERILATQTNAYWLQKIRAAGIPAGSVR 332
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
S+ + I L+ + ++G ++++ + T P PP LGEHTD++L+
Sbjct: 333 SVPEALDAPEIAARGLIVDTPDARHGSLRLMRSPLNLRGTPPRAPVAPPRLGEHTDHILR 392
Query: 121 DLLNYDETTIAKLKEKKIL 139
+LN + I + ++
Sbjct: 393 SVLNSTKEQIQAWHDAGVI 411
>gi|404401209|ref|ZP_10992793.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
fuscovaginae UPB0736]
Length = 406
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 191/294 (64%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+C +LADLGAEVIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWCGQILADLGAEVIKVERPGNGDDTRAWGPPFLKDARGENTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++++LA + D+L+ENF G L L Y+ L +N
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQRLVRELAMKSDILIENFKVGGLAAYGLDYESLKALNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 DLIYCSITGFGQHGPYAKRAGYDFMIQGLGGLMSLTGKPEGDEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ + G GQ ID LL QV+ L N NYL +G+ KR G +H N+V
Sbjct: 184 LYSTVAILAALAHRDRDGGGQHIDMALLDVQVACLANQAMNYLTSGVAPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ + + +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAEVAGQPQWADDPRFASNSARVANRAVLI 297
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 70/139 (50%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ + + RV NR +L I T+ KTT EW+ + V P +N
Sbjct: 268 FAEVAGQPQWADDPRFASNSARVANRAVLIPLIRQATVFKTTAEWVAQLEQVGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+SQVFAD ++ L E+ H G + V + S T E R PP LGEHT VL+
Sbjct: 328 DLSQVFADPQVKARGLAIELPHALAGHVPQVASPIRLSETPVEYRNAPPLLGEHTQEVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L+ +A L+E +L
Sbjct: 388 RVLSLSPDAVAALREAGVL 406
>gi|408480017|ref|ZP_11186236.1| putative CoA-transferase [Pseudomonas sp. R81]
Length = 406
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 138/294 (46%), Positives = 189/294 (64%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIKVE+P +GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWSGQILADLGAEVIKVERPGSGDDTRAWGPPFLKDAYGENTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ ++++LA + D+L+ENF G L L Y+ L EIN
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQALVRELAAKSDILIENFKVGGLAAYGLDYESLKEINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 ELIYCSITGFGQTGPYATRAGYDFMIQGLGGLMSLTGRPEGDDGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ G GQ ID LL QV+ L N NYL G KR G +H N+V
Sbjct: 184 LYSTVAILAALAHRDHDGGGQHIDMALLDVQVACLANQAMNYLTTGASPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ T + +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAEVAGQPQWADDPRFSTNKVRVANRAELI 297
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 67/139 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ T +RV NR L I T+ KTT EW+ + V P +N
Sbjct: 268 FAEVAGQPQWADDPRFSTNKVRVANRAELIPLIRQATVFKTTAEWVSQLERVGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD ++ L + H G + V + S T E R PP LGEHT VL+
Sbjct: 328 DLAQVFADPQVKARGLAMALPHALAGMVPQVASPIRLSKTPVEYRNAPPLLGEHTAQVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
D+L +A LK ++
Sbjct: 388 DVLGLAGVNVAALKASGVI 406
>gi|226288807|gb|EEH44319.1| formyl-coenzyme A transferase [Paracoccidioides brasiliensis Pb18]
Length = 449
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 133/311 (42%), Positives = 195/311 (62%), Gaps = 9/311 (2%)
Query: 191 NENKISLYENFYSLDLALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQ 250
+ N ++ + S A +LPL+ +R+LD+TR++AGP+CT +L DLGAEVIK+E
Sbjct: 20 SSNGLTATARWRSFSTAAMVNADNLPLAGIRVLDMTRVLAGPYCTQILGDLGAEVIKIEH 79
Query: 251 PVTGDECRKWGPPFLNNTE--------LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAK 302
P GD+ R WGPPF E S Y+ VNRNKKS+ + F P G +I+ L K
Sbjct: 80 PTRGDDTRAWGPPFAKYKEGTKKETPGESAYYLAVNRNKKSLALSFAHPSGVEILHKLVK 139
Query: 303 QCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGG 362
CDVLVEN++PG L + + Y+ + IN ++IY S+TG+G GPY R GYD++ + G
Sbjct: 140 DCDVLVENYIPGALKKYKMDYETIKAINPKVIYASITGYGQTGPYSQRAGYDVMVEAEMG 199
Query: 363 LLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSML 422
L+H+TG DGPP KVG+A DL TGLY A+MAAL+ + +TGKGQ ID L QV+ L
Sbjct: 200 LMHVTGSRDGPPVKVGVAVTDLTTGLYTSNAIMAALIGRARTGKGQHIDAALSDCQVATL 259
Query: 423 INVGANYLNAG-IEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHL 481
N+ ++ L +G + RWGT+H ++VP++ +KT +G + +G G+DK + +C +
Sbjct: 260 SNLASSALISGEKDSGRWGTAHPSIVPYRGYKTKDGDILLGGGNDKLFGVLCDKVGHPEW 319
Query: 482 ALDPRYLTGAL 492
D R+++ L
Sbjct: 320 KTDERFVSNNL 330
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 81/139 (58%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + D R+++ LRV+NR +L K I+ K EKTT+EWL IF+G PYA +N
Sbjct: 310 LCDKVGHPEWKTDERFVSNNLRVKNRVVLDKMIDDKMREKTTQEWLDIFEGTGMPYAAIN 369
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I H+ +V E+ H G +K+V + YS P VRTPPP LGEH++ VL+
Sbjct: 370 DIQGTLNHAHVLARGMVTEVEHATCGPMKLVNTPIKYSDATPGVRTPPPMLGEHSEEVLR 429
Query: 121 DLLNYDETTIAKLKEKKIL 139
DL+ + IA+LK+ ++
Sbjct: 430 DLVALGDAEIAQLKKDGVV 448
>gi|338975753|ref|ZP_08631102.1| L-carnitine dehydratase/bile acid-inducible protein F
[Bradyrhizobiaceae bacterium SG-6C]
gi|414168116|ref|ZP_11424320.1| hypothetical protein HMPREF9696_02175 [Afipia clevelandensis ATCC
49720]
gi|338231062|gb|EGP06203.1| L-carnitine dehydratase/bile acid-inducible protein F
[Bradyrhizobiaceae bacterium SG-6C]
gi|410888159|gb|EKS35963.1| hypothetical protein HMPREF9696_02175 [Afipia clevelandensis ATCC
49720]
Length = 422
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 136/295 (46%), Positives = 187/295 (63%), Gaps = 9/295 (3%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTEL 270
PL R+LDL+RI+AGP+ LL+DLGAEV K+E+P TGD+ R+WGPPFL N+T
Sbjct: 4 PLVGYRVLDLSRILAGPWLGQLLSDLGAEVWKIERPGTGDDTRQWGPPFLKDGDSNDTTE 63
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
S YF NR K S+CVD T EG +I++ LA+Q D+++EN+ G + R L Y+ L ++
Sbjct: 64 SAYFLSANRGKHSICVDIATEEGSEIVRSLAQQADIVIENYKVGDMRRYGLDYESLRKLK 123
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLAT 386
+IYCS+TG+G GP KD GYD+ + GGL+ ITG P G P KVG+ +D+ T
Sbjct: 124 QDIIYCSITGYGQTGPMKDVAGYDMAIQATGGLMSITGESDDKPGGGPQKVGVPIVDILT 183
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANV 446
G+Y+ V++ALLH+ +TG+GQ ID LL QVS+L N NYL G KR+G +H N+
Sbjct: 184 GMYSATGVLSALLHRERTGEGQHIDMALLDVQVSVLANQNMNYLTTGRPPKRYGNAHPNI 243
Query: 447 VPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
VP+QVFKT +G + G+D+Q++ C LA D R+ T L LI
Sbjct: 244 VPYQVFKTKDGSFVLAVGNDQQFRKFCATAGFAELAADTRFATNTDRLHNRDQLI 298
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C LA D R+ T R+ NR+ L ++ ++TT W+ + + V P A +N
Sbjct: 269 FCATAGFAELAADTRFATNTDRLHNRDQLIPLLDVHLAKQTTHHWVSLLEPVGVPCAPIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ QVFA + +L + H +VG + +S T+ E PP GE T+ VLK
Sbjct: 329 TLDQVFAHPQVIHRELQINLPHPSGAITPLVGNPIKFSKTKIEYSKSPPLRGEDTEQVLK 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L +D+ I +L +++I+
Sbjct: 389 TVLKFDQAKIQRLSDRRIV 407
>gi|395651440|ref|ZP_10439290.1| CoA-transferase, family III [Pseudomonas extremaustralis 14-3
substr. 14-3b]
Length = 406
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 190/294 (64%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIKVE+P +GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWAGQILADLGAEVIKVERPGSGDDTRAWGPPFLKDANGENTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ++++DLA + D+L+ENF G L L Y+ L E N
Sbjct: 64 AYYLSANRNKESVTIDFTRPEGQKLVRDLAAKSDILIENFKVGGLAAYGLDYESLKEANP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 ELIYCSITGFGQTGPYAARAGYDFMIQGLGGLMSLTGRPEGDDGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ G GQ ID LL QV+ L N NYL G+ +R G +H N+V
Sbjct: 184 LYSTVAILAALAHRDHEGGGQHIDMALLDVQVACLANQAMNYLTTGLPPRRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ T + +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAEVAGHPQWADDPRFSTNKVRVANRAELI 297
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 72/139 (51%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ T +RV NR L I T+ KTT EW+ + + V P +N
Sbjct: 268 FAEVAGHPQWADDPRFSTNKVRVANRAELIPLIRQATVFKTTTEWVSLLEQVGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD ++ L E+ H G + V + S T E R+ PP LGEHT+ VL+
Sbjct: 328 DLAQVFADPQVKARGLALELPHALAGMVPQVASPIRLSKTPVEYRSAPPLLGEHTERVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
D+L +A L+E ++
Sbjct: 388 DVLGLGAANVASLRELGVI 406
>gi|424060304|ref|ZP_17797795.1| hypothetical protein W9K_01418 [Acinetobacter baumannii Ab33333]
gi|404668256|gb|EKB36165.1| hypothetical protein W9K_01418 [Acinetobacter baumannii Ab33333]
Length = 405
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 134/284 (47%), Positives = 190/284 (66%), Gaps = 9/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ +T+ +
Sbjct: 4 LNGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPKVGDDTRSWGPPWMKDDSGQDTQEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK SV +D + EGQ++IK L + DV++EN+ G L + L Y+ LS IN
Sbjct: 64 AYYQSTNRNKLSVAIDIASSEGQELIKALIQDTDVVIENYKAGSLKKYGLDYESLSAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TGFG GP + PGYD I +GGL+ +TG P G P KVG+A DLATG
Sbjct: 124 KLVYCSITGFGQNGPRAEEPGYDFIIQGMGGLMSVTGERDDLPGGGPQKVGVAFSDLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL+++ TG GQ ID LL Q++ + N G NYL++G KR+G +HAN+V
Sbjct: 184 LYSTIAIQAALLNRHVTGLGQYIDMALLDVQIATMANQGMNYLSSGNIPKRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P+QVFK S+ I G+D Q+ +C+ + L L DPR+ A
Sbjct: 244 PYQVFKASDRDFIIACGNDTQFIQLCRSIGLPDLPNDPRFARNA 287
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 78/140 (55%), Gaps = 2/140 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + L L DPR+ A R+++RE + + + KT +EW+ P +N
Sbjct: 268 LCRSIGLPDLPNDPRFARNADRIKHREEIIGILSKHFLTKTADEWVDAIYAAKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q F + + +++ E++H + +K++G + S T E +T PP LGEHT VL
Sbjct: 328 NLEQAFQEPQVIAREMLVEMNHPQREKLKVIGSPIKLSRTPVEYKTAPPLLGEHTQAVLG 387
Query: 121 DLLNYDETTIAKLKEKKILG 140
+++ ++ +A+LKEK ++G
Sbjct: 388 RIVSSEK--LAELKEKGVIG 405
>gi|338997236|ref|ZP_08635937.1| hypothetical protein GME_04527 [Halomonas sp. TD01]
gi|338765833|gb|EGP20764.1| hypothetical protein GME_04527 [Halomonas sp. TD01]
Length = 404
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 129/278 (46%), Positives = 187/278 (67%), Gaps = 4/278 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL+ +++LD++R++AGP+C +LAD+GA+VIKVE+PV GD+ R WGPP+L+ + S Y+
Sbjct: 7 PLAGIKVLDISRVLAGPWCGQMLADMGADVIKVERPVNGDDTRHWGPPWLSGSSESAYYL 66
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
C NR K+SV VD PEGQ +IK LA + DVL+ENF G L + L Y+ L +N +LIY
Sbjct: 67 CANRGKRSVTVDMAKPEGQALIKQLAAKSDVLLENFKVGGLKKYGLDYESLKALNPRLIY 126
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATGLYAH 391
CS+TGFG + PY R GYD + ++GG++ +TG PD G P K G+A D+ TGLYA
Sbjct: 127 CSITGFGQESPYAHRAGYDFMIQAMGGIMSLTGRPDHEPGGGPIKSGVAFTDIFTGLYAA 186
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
AV+AAL + T G ID L+ QV +L N NYL +G +R G +H N+VP+Q
Sbjct: 187 NAVLAALYQRRDTDLGCHIDMALMDVQVGVLANQALNYLTSGQVPQRLGNAHPNIVPYQA 246
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
F T++G++ + G+D+Q++ C+V++ L LD R+ T
Sbjct: 247 FATADGHMIVAVGNDEQFKRFCQVIDQPSLPLDTRFAT 284
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 67/122 (54%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V++ L LD R+ T RV++R +L +EA + + T+EWL F+ P +N
Sbjct: 267 FCQVIDQPSLPLDTRFATNGARVQHRGVLAPLLEAVLLTQKTDEWLAAFEAAGVPSGPIN 326
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ +VF D H++ L + + H + G + +V + + +T PP+LGEHT VL
Sbjct: 327 TLDRVFDDPHVKARGLKQTLPHSQAGHVDLVANPIRINGESISAQTAPPSLGEHTQQVLD 386
Query: 121 DL 122
+L
Sbjct: 387 EL 388
>gi|326476443|gb|EGE00453.1| hypothetical protein TESG_07730 [Trichophyton tonsurans CBS 112818]
gi|326482116|gb|EGE06126.1| formyl-coenzyme A transferase [Trichophyton equinum CBS 127.97]
Length = 446
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 141/316 (44%), Positives = 202/316 (63%), Gaps = 14/316 (4%)
Query: 191 NENKISLYENFYSLDLA---LSSENPS---LPLSNVRILDLTRIIAGPFCTMLLADLGAE 244
N +K+S + N + A S+ PS LPL+ +R+LD+TR++AGP+CT +L DLGAE
Sbjct: 12 NTDKLSRFANNKAFTAACKRYSTAAPSVDTLPLAGIRVLDMTRVLAGPYCTQILGDLGAE 71
Query: 245 VIKVEQPVTGDECRKWGPPFL---NNTEL----STYFTCVNRNKKSVCVDFKTPEGQQII 297
V+K+E P GD+ R WGPP+ N+T+ S Y+ VNRNKKSV + F G +I+
Sbjct: 72 VVKIEHPTRGDDTRAWGPPYAKYKNDTKEGPGESAYYLGVNRNKKSVGLSFAHESGIEIL 131
Query: 298 KDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIA 357
LAK+ DV VEN++PG L + + Y+ L IN +LIY SVTG+G GPY R GYD++
Sbjct: 132 HKLAKESDVFVENYIPGSLKKYKMDYESLRAINPRLIYASVTGYGQTGPYSKRAGYDVMV 191
Query: 358 ASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLST 417
+ GL+HITG DGPP KVG+A DL TGLY A+MAAL+ + +TGKGQ ID L
Sbjct: 192 EAEMGLMHITGSRDGPPVKVGVAVTDLTTGLYTSNAIMAALIARGRTGKGQHIDACLSDC 251
Query: 418 QVSMLINVGANYLNAG-IEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVM 476
Q++ L N+ ++ L +G + RWGT+H ++VP++ FKT +G + +G G+D+ + +C +
Sbjct: 252 QIATLANLASSALISGEKDSGRWGTAHPSIVPYRSFKTKDGDILLGGGNDRLFGVLCDRL 311
Query: 477 NLQHLALDPRYLTGAL 492
D R+ T AL
Sbjct: 312 GHPEWKTDARFTTNAL 327
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 82/139 (58%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + D R+ T ALRV+NRE++ K IE T ++TT+EWL + +G PYA VN
Sbjct: 307 LCDRLGHPEWKTDARFTTNALRVKNREIIDKLIEDLTEQRTTQEWLEVMEGSGMPYAAVN 366
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I H+ +V+E+ H G IK+V V YS P +RTPPP LG+HTD VL
Sbjct: 367 DIQGALNHSHVLARGMVQEVDHPDCGPIKLVNTPVKYSHATPGIRTPPPTLGQHTDEVLS 426
Query: 121 DLLNYDETTIAKLKEKKIL 139
+++ YD+ IA+LK I+
Sbjct: 427 NIMGYDKERIAQLKANGIV 445
>gi|154248631|ref|YP_001419589.1| L-carnitine dehydratase/bile acid-inducible protein F [Xanthobacter
autotrophicus Py2]
gi|154162716|gb|ABS69932.1| L-carnitine dehydratase/bile acid-inducible protein F [Xanthobacter
autotrophicus Py2]
Length = 391
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 136/292 (46%), Positives = 185/292 (63%), Gaps = 4/292 (1%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELS-- 271
S PL+ +R+L+L RI+AGP+C LLADLGAEVIKVE+P GD+ R WGPPFL + +
Sbjct: 2 SPPLAGLRVLELARILAGPWCGQLLADLGAEVIKVERPGGGDDTRTWGPPFLTGEDGADL 61
Query: 272 --TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEI 329
YF NR K+SV VDF+T EGQ+ I+ LA+Q DV++ENF G L + L Y L
Sbjct: 62 GAAYFHATNRGKRSVAVDFETAEGQETIRALARQSDVVIENFKVGGLKKYGLDYASLKAE 121
Query: 330 NSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLY 389
N +L+YCSVTGFG GPY R GYD + +GG++ +TG P+G P KVG+A D+ TGLY
Sbjct: 122 NPRLVYCSVTGFGQDGPYAPRAGYDFLVQGMGGIMDLTGAPEGEPQKVGVAFADIFTGLY 181
Query: 390 AHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPH 449
A ++AAL + +TG G +D LL TQV +L N NYL +G +R G +H N+VP+
Sbjct: 182 ATVGILAALRRREETGTGGHVDMALLDTQVGVLANQAMNYLTSGKAPRRMGNAHPNIVPY 241
Query: 450 QVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
QVF ++GY G+D Q+ C V+ LA + + T +A + L+
Sbjct: 242 QVFPCADGYFIAAVGNDGQFARFCAVLGAPELAQEADFGTNPARVAHRAALV 293
>gi|119496537|ref|XP_001265042.1| CAIB/BAIF family enzyme [Neosartorya fischeri NRRL 181]
gi|119413204|gb|EAW23145.1| CAIB/BAIF family enzyme [Neosartorya fischeri NRRL 181]
Length = 448
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 130/291 (44%), Positives = 192/291 (65%), Gaps = 8/291 (2%)
Query: 207 ALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL- 265
A+ + + +LPL +R+LD+TR++AGP+CT +L DLGA++IKVE PV GD+ R WGPP+
Sbjct: 36 AIPTSDDTLPLKGIRVLDMTRVLAGPYCTQILGDLGADIIKVEHPVRGDDTRAWGPPYAK 95
Query: 266 ------NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRL 319
+ S YF VNRNK+S+ + F G +I+ LAK+CDVLVEN++PG L +
Sbjct: 96 YIDGSHDGPGESAYFLAVNRNKRSIGLSFAHKSGVEILHKLAKECDVLVENYLPGTLKKY 155
Query: 320 NLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGI 379
L Y+ L IN +L+Y S+TG+G GPY +R GYD++ + GL+HITG DG P KVG+
Sbjct: 156 GLDYETLRSINPRLVYASITGYGQTGPYSNRAGYDVMVEAEMGLMHITGSRDGDPVKVGV 215
Query: 380 ASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAG-IEGKR 438
A DL TGLY A+MAALL + +TG+GQ ID L QV+ L N+ ++ L +G + R
Sbjct: 216 AVTDLTTGLYTSNAIMAALLARMRTGQGQHIDACLSDCQVATLANIASSALISGEKDSGR 275
Query: 439 WGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
WGT+H ++VP++ ++T +G + G G+D+ + +C + DPR++T
Sbjct: 276 WGTAHPSIVPYRSYQTLDGDILFGGGNDRLFGVLCDRLGFPEWKTDPRFIT 326
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 81/139 (58%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + DPR++T RV++RE L IE + +KTT+EWL I +G PYA +N
Sbjct: 309 LCDRLGFPEWKTDPRFITNRDRVKHREELDGLIEKRVKQKTTQEWLEILEGSGMPYAAIN 368
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I H+Q +V E+ H G +K+V + YS P VR PPP LG+HTD +L+
Sbjct: 369 DIQGTLNHSHVQARGMVTEVDHPACGPVKLVNTPIKYSHATPGVRRPPPTLGQHTDEILE 428
Query: 121 DLLNYDETTIAKLKEKKIL 139
+LLNYD+ I LK++ I+
Sbjct: 429 ELLNYDKANIELLKKEGIV 447
>gi|66048237|ref|YP_238078.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
syringae pv. syringae B728a]
gi|63258944|gb|AAY40040.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
syringae pv. syringae B728a]
Length = 406
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 135/294 (45%), Positives = 192/294 (65%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGA+VIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHIRVLDLSRVLAGPWAGQILADLGADVIKVERPGCGDDTRSWGPPFLRDAAGQNTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++++LA + D+++ENF L L Y+ L +N
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQRLVRELAAKSDIVIENFKVDGLAAYGLDYESLKAVNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY RPGYD + ++GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 KLIYCSITGFGQSGPYARRPGYDFMIQALGGLMSLTGLPEGEEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ ++ GQ ID LL QV+ L N NYL G+ KR G +H N+V
Sbjct: 184 LYSTTAILAALAHRDQSDIGQYIDMALLDVQVACLANQAMNYLTTGVAPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + + G+D Q++ V A DPR+LT L +A + LI
Sbjct: 244 PYQDFPTADGDLILTVGNDSQFRKFAAVAGQPQWADDPRFLTNTLRVAHRAELI 297
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 66/139 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
V A DPR+LT LRV +R L I T+ K+T +W+ + P VN
Sbjct: 268 FAAVAGQPQWADDPRFLTNTLRVAHRAELIPLIRQVTVFKSTAQWVGELEAAGVPCGPVN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD H+ L E+ H G + V + S T E PP LGEHT VL+
Sbjct: 328 DLAQVFADPHVVARGLAIELPHALAGRVPQVASPIRLSETPVEYTRAPPLLGEHTAQVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
LL E I L+E +L
Sbjct: 388 ALLGMGEEEITLLREAGVL 406
>gi|70733630|ref|YP_257270.1| family III CoA-transferase [Pseudomonas protegens Pf-5]
gi|68347929|gb|AAY95535.1| CoA-transferase, family III [Pseudomonas protegens Pf-5]
Length = 406
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 190/294 (64%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWSGQILADLGAEVIKVERPGNGDDTRAWGPPFLKDAYGENTTEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQQ++++LA + D+++ENF G L L Y+ L +N
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQQLVRELAAKSDIVIENFKVGGLAAYGLDYESLKAVNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 RLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPEGDEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ + G GQ ID LL QV+ L N NYL G+ KR G +H N+V
Sbjct: 184 LYSTVAILAALAHRDQGGGGQHIDMALLDVQVACLANQAMNYLTTGVAPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ T L +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAEVAGQPQWADDPRFATNKLRVANRAVLI 297
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 66/139 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ T LRV NR +L I T+ KTT EW+ + P +N
Sbjct: 268 FAEVAGQPQWADDPRFATNKLRVANRAVLIPLIRQATVFKTTAEWVSQLELAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD + L E+ H G + V + S T E R PP LGEHT VL+
Sbjct: 328 DLAQVFADPQVVARGLAVELPHALAGMVPQVASPIRLSQTPVEYRNAPPLLGEHTAEVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L + L+ +++
Sbjct: 388 RVLGMRVEAVDALRHSRVV 406
>gi|296824192|ref|XP_002850597.1| formyl-coenzyme A transferase [Arthroderma otae CBS 113480]
gi|238838151|gb|EEQ27813.1| formyl-coenzyme A transferase [Arthroderma otae CBS 113480]
Length = 446
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 135/308 (43%), Positives = 196/308 (63%), Gaps = 9/308 (2%)
Query: 193 NKISLYENFYSLDLALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPV 252
N I++ A+ S +LPL+ +R+LD+TR++AGP+CT +L DLGAEV+K+E P
Sbjct: 21 NNIAITAACRGFSTAVPSAG-TLPLAGIRVLDMTRVLAGPYCTQILGDLGAEVVKIEHPT 79
Query: 253 TGDECRKWGPPFLNNTE-------LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCD 305
GD+ R WGPP+ T+ S Y+ VNRNKKSV + F G +I+ LAK+ D
Sbjct: 80 RGDDTRAWGPPYAKYTDDAKEGPGESAYYLAVNRNKKSVGLSFAHESGIEILHKLAKESD 139
Query: 306 VLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLH 365
V VEN++PG L + + Y+ L IN +LIY S+TG+G GPY R GYD++ + GL+H
Sbjct: 140 VFVENYIPGSLKKYQMDYESLRAINPKLIYASITGYGQTGPYSQRAGYDVMVEAEMGLMH 199
Query: 366 ITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINV 425
ITG DGPP KVG+A DL TGLY A+MAAL+ + +TGKGQ ID L Q++ L N+
Sbjct: 200 ITGSRDGPPVKVGVAVTDLTTGLYTSNAIMAALIARGRTGKGQHIDACLSDCQIATLTNL 259
Query: 426 GANYLNAG-IEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALD 484
++ L +G + RWGT+H ++VP++ FKT +G + +G G+D+ + +C + D
Sbjct: 260 ASSALISGKKDSGRWGTAHPSIVPYRSFKTKDGDILLGGGNDRLFGILCDRLGHPEWKTD 319
Query: 485 PRYLTGAL 492
R++T AL
Sbjct: 320 ARFITNAL 327
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 80/139 (57%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + D R++T ALRV+NRE++ K IE T ++TT EWL I +G PYA VN
Sbjct: 307 LCDRLGHPEWKTDARFITNALRVKNREIIDKLIEDLTEQRTTNEWLDIMEGSGMPYAAVN 366
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I H+ +V+E+ H G IK+V V YS P +R+PPP LG+HTD VL
Sbjct: 367 DIQGALNHSHVLARGMVQEVDHPDCGPIKLVNTPVKYSHATPGIRSPPPTLGQHTDEVLS 426
Query: 121 DLLNYDETTIAKLKEKKIL 139
++ Y + IA+LK ++
Sbjct: 427 SVMGYSKERIAQLKADGVV 445
>gi|374367632|ref|ZP_09625693.1| acyl-CoA transferase [Cupriavidus basilensis OR16]
gi|373100935|gb|EHP41995.1| acyl-CoA transferase [Cupriavidus basilensis OR16]
Length = 406
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 133/282 (47%), Positives = 182/282 (64%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
LS++R+LDLTR++AGP+C LAD GA+VIK+E+P GD+ R WGPP+L + T +
Sbjct: 4 LSHLRVLDLTRVLAGPWCAQNLADFGADVIKIERPGAGDDTRTWGPPWLQDDQGRDTAEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV D T EGQ++++ LA Q DV++EN+ G+L + L Y L I
Sbjct: 64 AYYLAANRNKRSVTCDISTAEGQELVRALAAQSDVVLENYKVGQLKKYGLDYDSLKAIKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
LIYCSVTGFG GPY RPGYD I +GG + +TG P G P K G+A DL TG
Sbjct: 124 GLIYCSVTGFGQTGPYAARPGYDFIIQGMGGFMSLTGERDDLPGGGPQKAGVAISDLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
YA AV+AAL H+ +TG+GQ ID LL QV+ML N+ NYL +G +RWG +H N+V
Sbjct: 184 QYATIAVLAALAHRERTGEGQYIDMALLDVQVAMLANMNTNYLASGEAPRRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+ ++G++ + G+D Q++ LA DPR+ T
Sbjct: 244 PYQTFQAADGWIIVAVGNDGQFRKFVAAGGRPELADDPRFAT 285
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 69/131 (52%)
Query: 9 HLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFAD 68
LA DPR+ T RV +R++L I +T +W+L + P +N++ VF D
Sbjct: 276 ELADDPRFATNPQRVAHRDVLVPVIAEMVKPRTRAQWILDLEAAGVPCGPINTLDDVFED 335
Query: 69 EHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDET 128
++ L ++ H G++K+VG + S T PE PP LGEHTD VL D+L Y
Sbjct: 336 AQVKARGLRVDLPHPSAGEVKLVGSPIKMSATPPEAVRHPPLLGEHTDAVLGDMLGYTPE 395
Query: 129 TIAKLKEKKIL 139
IA L+ K +L
Sbjct: 396 QIAALRAKGVL 406
>gi|417544735|ref|ZP_12195821.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC032]
gi|421665708|ref|ZP_16105815.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC087]
gi|421671498|ref|ZP_16111471.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC099]
gi|400382623|gb|EJP41301.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC032]
gi|410382221|gb|EKP34776.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC099]
gi|410389974|gb|EKP42384.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC087]
Length = 405
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 132/280 (47%), Positives = 189/280 (67%), Gaps = 9/280 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ +R+LDL+R++AGP+C + ADLGAEVIK+E+P GD+ R WGPP++ +T+ +
Sbjct: 4 LNGIRVLDLSRVLAGPWCGQIFADLGAEVIKIERPKVGDDTRSWGPPWMKDDLGQDTQEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK SV +D +P+GQ++IK L + DV++EN+ G L + L Y+ LS IN
Sbjct: 64 AYYQSTNRNKLSVAIDIASPDGQELIKALIQDTDVVIENYKAGSLKKYGLDYESLSAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TGFG GP + PGYD I +GGL+ +TG P G P KVG+A DLATG
Sbjct: 124 KLVYCSITGFGQTGPRAEEPGYDFIIQGMGGLMSVTGERDDLPGGGPQKVGVAFSDLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL+++ TG GQ ID LL Q++ + N G NYL++G KR+G +HAN+V
Sbjct: 184 LYSTIAIQAALLNRHVTGLGQYIDMALLDVQIATMANQGMNYLSSGNIPKRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
P+QVFK S+ I G+D Q+ +C+ + L L DPR+
Sbjct: 244 PYQVFKASDRDFIIACGNDTQFIQLCRSIGLPDLPNDPRF 283
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 79/140 (56%), Gaps = 2/140 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + L L DPR+ A R+++R+ + ++ + KT +EW+ P +N
Sbjct: 268 LCRSIGLPDLPNDPRFSRNADRIKHRDEIIGILQTHFLTKTADEWVDAIYAAKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q F + + +++ E++H + +K++G + S T E +T PP LGEHT VL
Sbjct: 328 NLEQAFQEPQVIAREMLVEMNHPQREKLKVIGSPIKLSRTPVEYKTAPPLLGEHTQAVLG 387
Query: 121 DLLNYDETTIAKLKEKKILG 140
+++ ++ +A+LKEK ++G
Sbjct: 388 RVVSSEK--LAELKEKGVIG 405
>gi|445400462|ref|ZP_21430020.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-57]
gi|444783370|gb|ELX07230.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-57]
Length = 405
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 134/284 (47%), Positives = 190/284 (66%), Gaps = 9/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ +T+ +
Sbjct: 4 LNGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPKVGDDTRSWGPPWMKDDSGQDTQEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK SV +D + EGQ++IK L + DV++EN+ G L + L Y+ LS IN
Sbjct: 64 AYYQSTNRNKLSVAIDIASSEGQELIKALIQDTDVVIENYKAGSLKKYGLDYESLSAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TGFG GP + PGYD I +GGL+ +TG P G P KVG+A DLATG
Sbjct: 124 KLVYCSITGFGQNGPRAEEPGYDFIIQGMGGLMSVTGERDDLPGGGPQKVGVAFSDLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL+++ TG GQ ID LL Q++ + N G NYL++G KR+G +HAN+V
Sbjct: 184 LYSTIAIQAALLNRHVTGLGQYIDMALLDVQIATMANQGMNYLSSGNIPKRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P+QVFK S+ I G+D Q+ +C+ + L L DPR+ A
Sbjct: 244 PYQVFKASDRDFIIACGNDTQFIQLCRSIGLPDLPNDPRFARNA 287
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 79/140 (56%), Gaps = 2/140 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + L L DPR+ A R+++R+ + ++ + KT +EW+ P +N
Sbjct: 268 LCRSIGLPDLPNDPRFARNADRIKHRDEIIGILQTHFLTKTADEWVDAIYAAKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q F + + +++ E++H + +K++G + S T E +T PP LGEHT VL
Sbjct: 328 NLEQAFQEPQVIAREMLVEMNHPQREKLKVIGSPIKLSRTPVEYKTAPPLLGEHTQAVLG 387
Query: 121 DLLNYDETTIAKLKEKKILG 140
+++ ++ +A+LKEK ++G
Sbjct: 388 RIVSSEK--LAELKEKGVIG 405
>gi|262376440|ref|ZP_06069669.1| formyl-CoA transferase [Acinetobacter lwoffii SH145]
gi|262308579|gb|EEY89713.1| formyl-CoA transferase [Acinetobacter lwoffii SH145]
Length = 407
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 142/281 (50%), Positives = 187/281 (66%), Gaps = 9/281 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
L+ R+LDL+RI+AGP+C+ +LADLGAEVIK+E+P GD+ R WGPP+L N T S
Sbjct: 4 LTGFRVLDLSRILAGPWCSQILADLGAEVIKIEKPDHGDDTRIWGPPWLKNNQQQDTHES 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NR K SV +D TPEGQ IIK LA+Q DV++EN+ G L R L Y+ LS++N
Sbjct: 64 AYYLSANRGKHSVAIDLSTPEGQSIIKKLAEQSDVVIENYKAGSLKRYGLDYESLSQLNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TGFG GP PGYD I +GG++ +TG P G P K G+A DL TG
Sbjct: 124 RLVYCSITGFGQNGPRAQEPGYDFIVQGMGGMMSVTGERDDLPGGGPQKAGLAFADLTTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA A+ AALL + KTG+GQ ID LL TQV+ L + NYL +G R+G +HAN+V
Sbjct: 184 LYAAIAIQAALLSREKTGEGQYIDMALLDTQVASLSVLAMNYLTSGKVPGRFGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYL 488
P+QVFK G I G+D Q+Q +C+ + L +A DPR+L
Sbjct: 244 PYQVFKAQEGEFIIACGNDLQFQALCQAVGLAKVAEDPRFL 284
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 2/139 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + L +A DPR+L + RV +RE L ++A + + W+ + V P +N
Sbjct: 268 LCQAVGLAKVAEDPRFLKNSGRVTHREELTTVLQAHFYTRPAKTWVDLIHAVKVPVGMIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ Q +E + +V ++ H D +G + S T E + PP LGE TD +L
Sbjct: 328 DLKQTLQEEQVLARDMVIQMPHTLREDYTSIGSPIKLSKTPVEYKKAPPCLGEDTDTILS 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
L+ E + +LK KK++
Sbjct: 388 QYLSSAE--MEELKSKKVI 404
>gi|422672464|ref|ZP_16731827.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
syringae pv. aceris str. M302273]
gi|330970201|gb|EGH70267.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
syringae pv. aceris str. M302273]
Length = 406
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 134/294 (45%), Positives = 192/294 (65%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
LS++R+LDL+R++AGP+ +LADLGA+VIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHIRVLDLSRVLAGPWAGQILADLGADVIKVERPGCGDDTRSWGPPFLQDAAGQNTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++++LA + D+++ENF L L Y+ L +N
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQRLVRELAAKSDIVIENFKVDGLAAYGLDYESLRAVNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY RPGYD + ++GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 RLIYCSITGFGQSGPYARRPGYDFMIQALGGLMSLTGLPEGEEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ ++ GQ ID LL QV+ L N NYL G+ +R G +H N+V
Sbjct: 184 LYSTTAILAALAHRDQSDIGQYIDMALLDVQVACLANQAMNYLTTGVAPRRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + + G+D Q++ V A DPR+LT L +A + LI
Sbjct: 244 PYQDFPTADGDLVLTVGNDSQFRKFAAVAGQPQWADDPRFLTNTLRVAHRAELI 297
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 66/139 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
V A DPR+LT LRV +R L I T+ K+T +W+ + P VN
Sbjct: 268 FAAVAGQPQWADDPRFLTNTLRVAHRAELIPLIRQVTVFKSTAQWVGELEAAGVPCGPVN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD H+ L E+ H G + V + S T E PP LGEHT VL+
Sbjct: 328 DLAQVFADPHVVARGLAIELPHALAGRVPQVASPIRLSETPVEYTRAPPLLGEHTAQVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
LL E I L+E +L
Sbjct: 388 ALLGMGEEEITLLREAGVL 406
>gi|378948097|ref|YP_005205585.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
fluorescens F113]
gi|359758111|gb|AEV60190.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
fluorescens F113]
Length = 406
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 138/294 (46%), Positives = 188/294 (63%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGA+VIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWAGQILADLGADVIKVERPGNGDDTRAWGPPFLKDARGENTTEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++++LA + D+L+ENF G L L Y+ L IN
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQRLVRELAAKSDILIENFKVGGLAAYGLDYESLKAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
QLIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 QLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPEGDDGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ G GQ ID LL QV+ L N NYL G KR G +H N+V
Sbjct: 184 LYSTAAILAALAHRDHAGGGQHIDMALLDVQVACLANQAMNYLTTGNAPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ T L +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAEVAGQPQWADDPRFATNKLRVANRAVLI 297
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 69/139 (49%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ T LRV NR +L I T+ KTT EW+ + P +N
Sbjct: 268 FAEVAGQPQWADDPRFATNKLRVANRAVLIPLIRQATVFKTTAEWVAQLERAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD +Q L E+ H G + V + S T E R PP LGEHT VL+
Sbjct: 328 DLAQVFADPQVQARGLAMELPHVLAGSVPQVASPIRLSETPVEYRHAPPLLGEHTLEVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L DE T+ +E +L
Sbjct: 388 RVLGLDEATVKAFREAGVL 406
>gi|145255443|ref|XP_001398966.1| CAIB/BAIF family enzyme [Aspergillus niger CBS 513.88]
gi|134084557|emb|CAK43310.1| unnamed protein product [Aspergillus niger]
gi|350630753|gb|EHA19125.1| hypothetical protein ASPNIDRAFT_212116 [Aspergillus niger ATCC
1015]
Length = 443
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 132/283 (46%), Positives = 190/283 (67%), Gaps = 7/283 (2%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE---- 269
+LPL +R+LD+TR++AGP+CT +L DLGA+VIK+E PV GD+ R WGPP+ T+
Sbjct: 39 TLPLKGIRVLDMTRVLAGPYCTQILGDLGADVIKIEHPVRGDDTRAWGPPYATYTDGSEG 98
Query: 270 --LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLS 327
S Y+ VNRNKKS+ + F G +I+ LAK+CDVLVEN++PG L + N+ Y+ L
Sbjct: 99 PGESAYYLGVNRNKKSIGLSFAHKSGVEILHRLAKECDVLVENYLPGNLKKYNMDYETLR 158
Query: 328 EINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATG 387
IN +LIY S+TG+G GPY +R GYD++ + GL+HITG +G P KVG+A DL TG
Sbjct: 159 SINPKLIYASITGYGQTGPYSNRAGYDVMVEAEMGLMHITGSREGEPVKVGVAVTDLTTG 218
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAG-IEGKRWGTSHANV 446
LY A+MAALL + +TGKGQ ID L QV+ L N+ ++ L +G + RWGT+H ++
Sbjct: 219 LYTSNAIMAALLARARTGKGQHIDACLSDCQVATLANIASSALISGKKDSGRWGTAHPSI 278
Query: 447 VPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
VP++ +KT +G + G G+D+ + +C + DPR++T
Sbjct: 279 VPYRSYKTLDGDILFGGGNDRLFGVLCDRLGHPEWKTDPRFVT 321
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 79/139 (56%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + DPR++T + RV++R + IE +KTT+EWL I +G PYA VN
Sbjct: 304 LCDRLGHPEWKTDPRFVTNSDRVKHRTDIDGLIEETVKQKTTQEWLEILEGSGMPYAAVN 363
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I H+Q +V EI H G IK+V + YS P +RTPPP LG+HTD +L
Sbjct: 364 DIQGTLNHSHVQARGMVAEIDHPACGPIKLVNTPIKYSHATPGIRTPPPTLGQHTDEILG 423
Query: 121 DLLNYDETTIAKLKEKKIL 139
+LL Y + IA+LK+ ++
Sbjct: 424 ELLEYGKDDIARLKKDGVV 442
>gi|315055617|ref|XP_003177183.1| formyl-coenzyme A transferase [Arthroderma gypseum CBS 118893]
gi|311339029|gb|EFQ98231.1| formyl-coenzyme A transferase [Arthroderma gypseum CBS 118893]
Length = 446
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 140/314 (44%), Positives = 201/314 (64%), Gaps = 14/314 (4%)
Query: 193 NKISLYEN---FYSLDLALSSENPS---LPLSNVRILDLTRIIAGPFCTMLLADLGAEVI 246
NK+S + N F + S+ PS LPL+ +R+LD+TR++AGP+CT +L DLGAEV+
Sbjct: 14 NKLSRFTNSKAFAATCKRFSTAAPSADTLPLAGIRVLDMTRVLAGPYCTQILGDLGAEVV 73
Query: 247 KVEQPVTGDECRKWGPPFL----NNTE---LSTYFTCVNRNKKSVCVDFKTPEGQQIIKD 299
K+E P GD+ R WGPP+ + TE S Y+ VNRNKKSV + F G +I+
Sbjct: 74 KIEHPTRGDDTRAWGPPYAKYKDDTTEGPGESAYYLGVNRNKKSVGLSFAHESGIEILHK 133
Query: 300 LAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAAS 359
LAK+ DV VEN++PG L + + Y+ L IN +LIY S+TG+G GPY R GYD++ +
Sbjct: 134 LAKESDVFVENYIPGSLKKYKMDYESLRAINPRLIYASITGYGQTGPYSKRAGYDVMVEA 193
Query: 360 IGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQV 419
GL+HITG DGPP KVG+A DL TGLY A+MAAL+ + +TGKGQ ID L Q+
Sbjct: 194 EMGLMHITGSRDGPPVKVGVAVTDLTTGLYTSNAIMAALIARGRTGKGQHIDACLSDCQI 253
Query: 420 SMLINVGANYLNAG-IEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNL 478
+ L N+ ++ L +G + RWGT+H ++VP++ FKT +G + +G G+D+ + +C +
Sbjct: 254 ATLANLASSALISGEKDSGRWGTAHPSIVPYRSFKTKDGDILLGGGNDRLFGVLCDRLGH 313
Query: 479 QHLALDPRYLTGAL 492
D R++T AL
Sbjct: 314 PEWKTDERFITNAL 327
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 83/139 (59%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + D R++T ALRV+NRE++ K IE T ++TT+EWL + +G PYA VN
Sbjct: 307 LCDRLGHPEWKTDERFITNALRVKNREIIDKLIEDLTEQRTTQEWLEVMEGSGMPYAAVN 366
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I H+ +V+EI H G IK+V V YS P +RTPPP LG+HTD +L
Sbjct: 367 DIQGALNHSHVLARGMVQEIDHPNCGPIKLVNTPVKYSHATPGIRTPPPTLGQHTDEILS 426
Query: 121 DLLNYDETTIAKLKEKKIL 139
+++ YD+ IA+LK I+
Sbjct: 427 NIMGYDKGKIAQLKADGIV 445
>gi|94314028|ref|YP_587237.1| L-carnitine dehydratase/bile acid-inducible protein F [Cupriavidus
metallidurans CH34]
gi|93357880|gb|ABF11968.1| L-carnitine dehydratase/bile acid-inducible protein F [Cupriavidus
metallidurans CH34]
Length = 394
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 134/282 (47%), Positives = 183/282 (64%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
L +R+LDL+RI+AGP+CT LADLGAEV+KVE P GD+ R WGPP+L+ + LS
Sbjct: 6 LEGIRVLDLSRILAGPWCTQNLADLGAEVVKVEHPQRGDDTRGWGPPYLDAADGSDARLS 65
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NR K+SVC+D+ PEG + +LA+ DVLVEN+ G L R L Y L IN
Sbjct: 66 AYFISCNRGKQSVCIDYGQPEGVAQLLELARHADVLVENYKVGTLKRYGLDYASLKAINP 125
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIY S+TGFG GP D+PGYD + +GGL+ TG PDG P + G+A +D++TG
Sbjct: 126 RLIYLSITGFGQDGPMADKPGYDYVFQGMGGLMSYTGQPDGSPGAGPLRTGVAVVDVSTG 185
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA AV+AAL + +TG+GQ +D LL V++ N GANYL +G +R G +H N
Sbjct: 186 MYATSAVLAALFQRQQTGEGQHLDIALLDVAVALNANQGANYLVSGKNPQRTGNAHPNCA 245
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P++VF+ ++GY+ + G+D Q+ C V LA DPRY+T
Sbjct: 246 PYEVFRCADGYLILAIGNDTQFARFCDVAGRPDLAQDPRYVT 287
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 46/91 (50%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C V LA DPRY+T + R+E+ L K + A ++ +W F P+ ++
Sbjct: 270 FCDVAGRPDLAQDPRYVTNSGRIEHLTELRKVLTALFPTRSRADWTSAFDAAGVPWGPIH 329
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIV 91
++ +VFA +Q +L + +H G++ +V
Sbjct: 330 TMEEVFAHPQVQHRQLRQVATHPVTGEVPMV 360
>gi|281354559|gb|EFB30143.1| hypothetical protein PANDA_002043 [Ailuropoda melanoleuca]
Length = 222
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 133/224 (59%), Positives = 168/224 (75%), Gaps = 2/224 (0%)
Query: 227 RIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTCVNRNKKSVCV 286
R++AGPF TM L DLGAEVIKVE+P GD+ R WGPPF+ TE STYF VNRNKKS+ V
Sbjct: 1 RVLAGPFATMNLGDLGAEVIKVERPGAGDDTRTWGPPFVG-TE-STYFLSVNRNKKSIAV 58
Query: 287 DFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGP 346
+ K P+G +IIK+LA CDV VEN+VPGKL + LGY+ + +I +IYCS+TG+G GP
Sbjct: 59 NIKDPKGVKIIKELAAVCDVFVENYVPGKLSAVGLGYEDVDKIAPHIIYCSITGYGQTGP 118
Query: 347 YKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGK 406
R GYD +A+++ GL+HITG DG P + G+A DLATGLYA+GA+MA L+ +YKTGK
Sbjct: 119 LSQRAGYDAVASAVSGLMHITGPEDGDPVRPGVAMTDLATGLYAYGAIMAGLIRRYKTGK 178
Query: 407 GQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQ 450
G IDCNLLS+QV+ L V ANYL E KRWGT+H ++VP+Q
Sbjct: 179 GLFIDCNLLSSQVACLTQVAANYLIGQKEAKRWGTAHGSIVPYQ 222
>gi|296535415|ref|ZP_06897611.1| formyl-CoA transferase [Roseomonas cervicalis ATCC 49957]
gi|296264280|gb|EFH10709.1| formyl-CoA transferase [Roseomonas cervicalis ATCC 49957]
Length = 434
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 129/295 (43%), Positives = 190/295 (64%), Gaps = 7/295 (2%)
Query: 204 LDLALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPP 263
+ A + P PL+ +R+LDL+R++A P+ T +L DLGAEV+KVEQP +GD+ R+WGPP
Sbjct: 9 MSAAPAEAAPQGPLAGLRVLDLSRVLAAPWATQILGDLGAEVLKVEQPGSGDDTRRWGPP 68
Query: 264 FLNNTEL---STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLN 320
FL++ + YF C NRNK+S+ +DF PEG +++ LA D+LVENF G L +
Sbjct: 69 FLDDGSERPDAAYFLCANRNKRSIAIDFARPEGAALVRRLAAGADILVENFRTGGLAKYG 128
Query: 321 LGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCK 376
L L + +L+YCS+TGFG GPY R GYD + + GL+ +TG PDG P K
Sbjct: 129 LDAATLCAAHPRLVYCSITGFGQTGPYAARGGYDFLIQGLSGLMSVTGRPDGAEGAGPMK 188
Query: 377 VGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEG 436
VG+ DL TGLYA +++AAL + ++G GQ +DC LL +Q+++L+N G NYL G
Sbjct: 189 VGLPVSDLFTGLYATISILAALRERERSGLGQHLDCALLDSQLAVLVNQGMNYLVGGTVP 248
Query: 437 KRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
R G H NVVP++ F ++ Y+ + G+D Q++ +C+++ L +A DPR+ T A
Sbjct: 249 GRLGNDHPNVVPYRDFAAADDYIIVACGNDAQFRALCRLLGLGAMAEDPRFATNA 303
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 3/149 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+++ L +A DPR+ T A R+ R L + E L + P +N
Sbjct: 284 LCRLLGLGAMAEDPRFATNAGRMRERRTLELALARAIAPWKAAELLAAMERAGVPGGPIN 343
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I QV AD + L++ + + ++G +S T P R PP LG+ T +L
Sbjct: 344 TIDQVLADPQVAARGLLRSLCRADGTPLTVIGYPGQFSRTPPSYRHAPPWLGQDTAEILS 403
Query: 121 DLLNYDETTIAKLKEKKILGLIERLTKNA 149
LL D I LK+ G+++ T+ A
Sbjct: 404 GLLGLDAAEIEALKQA---GVVQAATRQA 429
>gi|330806832|ref|YP_004351294.1| CoA-transferase [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|423694665|ref|ZP_17669155.1| CoA-transferase, family III [Pseudomonas fluorescens Q8r1-96]
gi|327374940|gb|AEA66290.1| Putative CoA-transferase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|388004462|gb|EIK65775.1| CoA-transferase, family III [Pseudomonas fluorescens Q8r1-96]
Length = 406
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 138/294 (46%), Positives = 188/294 (63%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGA+VIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWAGQILADLGADVIKVERPGNGDDTRAWGPPFLKDARGENTTEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++++LA + D+L+ENF G L L Y+ L IN
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQRLVRELAAKSDILIENFKVGGLAAYGLDYESLKAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
QLIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 QLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPEGDEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ G GQ ID LL QV+ L N NYL G KR G +H N+V
Sbjct: 184 LYSTAAILAALAHRDHAGGGQHIDMALLDVQVACLANQAMNYLTTGNAPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ T L +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAEVAGQPQWADDPRFATNKLRVANRAVLI 297
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 69/139 (49%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ T LRV NR +L I T+ KTT EW++ + P +N
Sbjct: 268 FAEVAGQPQWADDPRFATNKLRVANRAVLIPLIRQATVFKTTAEWVVQLEQAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD +Q L E+ H G + V + S T E R PP LGEHT VL+
Sbjct: 328 DLAQVFADPQVQARGLAMELPHVLAGSVPQVASPIRLSETPVEYRNAPPLLGEHTLEVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L D+ + +E +L
Sbjct: 388 RVLGLDQAAVTAFREAGVL 406
>gi|311109831|ref|YP_003982682.1| CoA-transferase family III family protein 52 [Achromobacter
xylosoxidans A8]
gi|310764520|gb|ADP19967.1| CoA-transferase family III family protein 52 [Achromobacter
xylosoxidans A8]
Length = 420
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 134/282 (47%), Positives = 186/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL-----S 271
LS++RILDLTR++AGP+CT +LAD+GA+VIKVE+PV GD+ R WGPP++NN S
Sbjct: 5 LSHLRILDLTRVLAGPWCTQMLADMGADVIKVERPVLGDDTRHWGPPWINNESGERVGDS 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YFT NRNK+S+ +D T +GQ ++++LA+Q DVLVEN+ G L R L Y L E+N
Sbjct: 65 AYFTSANRNKRSIAIDIATEQGQALVRELAQQSDVLVENYKVGDLARYGLSYAELRELNP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TG+G GPY PGYD I GGL+ ITG P G P K IA D+ TG
Sbjct: 125 RLVYCSITGYGQDGPYSHLPGYDFIFQGEGGLMSITGERDDKPGGGPMKSAIAVADVLTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
L A ++ A+ ++ TG GQ ID LL T V+ N A+Y +G +RWG H N+
Sbjct: 185 LNATIGILTAIEGRHATGLGQHIDVALLDTVVNFGANQIASYFASGAIPRRWGNEHPNLA 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F T++G++ IG G+D Q++ +C ++ LA DPR+L+
Sbjct: 245 PYQTFATADGHIIIGCGNDGQFRKLCALIRAPELAGDPRFLS 286
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 63/139 (45%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ LA DPR+L+ R NR L + +EA + + WL + P +N
Sbjct: 269 LCALIRAPELAGDPRFLSMPDRNVNRAALVETLEAIFRSQPSAHWLGLLANSEVPNGSIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ +QVF + L E+ H + +V + S T E R PP G+HT VL
Sbjct: 329 NYAQVFEHPQVVHRGLRVEMPHPGGTTVSVVANPIRLSGTPVEYRFAPPLRGQHTAEVLS 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
LL IA L+ +I+
Sbjct: 389 ALLGRSPDDIAALEAARII 407
>gi|429334343|ref|ZP_19215010.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
putida CSV86]
gi|428760987|gb|EKX83234.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
putida CSV86]
Length = 406
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 189/294 (64%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIKVE+P +GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWSGQILADLGAEVIKVERPGSGDDTRAWGPPFLKDSSGENTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++++LA + DV++ENF G L L Y L +IN
Sbjct: 64 AYYLSANRNKRSVTIDFTRPEGQKLVRELAAKSDVVIENFKVGGLAAYGLDYASLRQINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 NLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPEGEDGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ + G GQ ID LL QV+ L N NYL G +R G +H N+V
Sbjct: 184 LYSTVAILAALAHRDQHGGGQHIDMALLDVQVACLANQAMNYLTTGTPPRRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ T L +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAEVAGQPQWADDPRFATNKLRVANRAELI 297
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 69/139 (49%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ T LRV NR L I T+ KTT EW+ + P +N
Sbjct: 268 FAEVAGQPQWADDPRFATNKLRVANRAELIPLIRQATVFKTTAEWVSQLEQAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++Q+FAD +Q L +I H G + V + S T E R PP LGEHT+ +L
Sbjct: 328 DLAQMFADPQVQARGLAIDIPHPLAGIVPQVASPIRLSETPVEYRNAPPLLGEHTEQILA 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L+ D I +L+E +L
Sbjct: 388 GVLDLDADAIQRLREAGVL 406
>gi|407008256|gb|EKE23683.1| hypothetical protein ACD_6C00376G0002 [uncultured bacterium]
Length = 407
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 143/281 (50%), Positives = 186/281 (66%), Gaps = 9/281 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
L+ R+LDL+RI+AGP+C+ +LADLGAEVIK+E+P GD+ R WGPP+L N T S
Sbjct: 4 LTGFRVLDLSRILAGPWCSQILADLGAEVIKIEKPDHGDDTRIWGPPWLKNNQQEDTHES 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NR K SV VD TPEGQ IIK LA+Q DV++EN+ G L R L Y+ LS+IN
Sbjct: 64 AYYLSANRGKYSVAVDLSTPEGQSIIKKLAEQSDVVIENYKAGSLKRYGLDYESLSQINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TGFG GP PGYD I +GG++ +TG P G P K G+A DL TG
Sbjct: 124 RLVYCSITGFGQNGPRAQEPGYDFIVQGMGGMMSVTGERDDLPGGGPQKAGLAFADLTTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA A+ AALL + KTG+GQ ID LL TQV+ L + NYL +G R+G +HAN+V
Sbjct: 184 LYAAIAIQAALLSREKTGEGQYIDMALLDTQVASLSVLAMNYLTSGKVPGRFGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYL 488
P+QVFK G I G+D Q+Q +C+ + L + DPR+L
Sbjct: 244 PYQVFKAQEGEFIIACGNDLQFQALCQAVGLAKVGEDPRFL 284
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 2/139 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + L + DPR+L + RV +RE L ++A + + W+ + V P +N
Sbjct: 268 LCQAVGLAKVGEDPRFLKNSGRVTHREELTTVLQAHFYTRPAKTWVDLIHAVKVPVGMIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ Q +E + +V ++ H D +G + S T E + PP LGE TD +L
Sbjct: 328 DLKQTLQEEQVLARDMVIKMPHTLREDYTSIGSPIKLSKTPVEYKKAPPCLGEDTDAILS 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
L+ E + +LK KK++
Sbjct: 388 QYLSSAE--MEELKSKKVI 404
>gi|295671000|ref|XP_002796047.1| formyl-coenzyme A transferase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284180|gb|EEH39746.1| formyl-coenzyme A transferase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 449
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 131/308 (42%), Positives = 195/308 (63%), Gaps = 9/308 (2%)
Query: 191 NENKISLYENFYSLDLALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQ 250
+ N ++ + S + +LPL+ +R+LD+TR++AGP+CT +L DLGAEVIK+E
Sbjct: 20 SNNGLTATARWRSFSTTAMANVDNLPLAGIRVLDMTRVLAGPYCTQILGDLGAEVIKIEH 79
Query: 251 PVTGDECRKWGPPFLNNTE--------LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAK 302
P+ GD+ R WGPPF E S Y+ VNRNKKS+ + F P G +I+ L K
Sbjct: 80 PIRGDDTRAWGPPFAKYKEGTKKETPGESAYYLAVNRNKKSLALSFAHPSGVEILHKLVK 139
Query: 303 QCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGG 362
CDVLVEN++PG L + + Y+ + IN ++IY S+TG+G GPY R GYD++ + G
Sbjct: 140 DCDVLVENYIPGALKKYKMDYESIKAINPKVIYASITGYGQTGPYSQRAGYDVMVEAEMG 199
Query: 363 LLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSML 422
L+H+TG DGPP KVG+A DL TGLY A+MAAL+ + +TGKGQ ID L QV+ L
Sbjct: 200 LMHVTGSRDGPPVKVGVAVTDLTTGLYTSNAIMAALIGRARTGKGQHIDAALSDCQVATL 259
Query: 423 INVGANYLNAG-IEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHL 481
N+ ++ L +G + RWGT+H ++VP++ +KT +G + +G G+DK + +C +
Sbjct: 260 SNLASSALISGEKDSGRWGTAHPSIVPYRGYKTKDGDILLGGGNDKLFGVLCDKVGHPEW 319
Query: 482 ALDPRYLT 489
D R+++
Sbjct: 320 KTDERFVS 327
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 79/139 (56%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + D R+++ RV+NR +L K I+ K EKTT+EWL IF+G PYA +N
Sbjct: 310 LCDKVGHPEWKTDERFVSNNFRVKNRVVLDKMIDDKMREKTTQEWLDIFEGSGMPYAAIN 369
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I H+ +V E+ H G +K+V + YS P VRTPPP LGEH++ +L+
Sbjct: 370 DIQGTLNHAHVLARGMVTEVEHPTCGPMKLVNTPIKYSDATPGVRTPPPMLGEHSEEILR 429
Query: 121 DLLNYDETTIAKLKEKKIL 139
DL+ IA+LK+ ++
Sbjct: 430 DLVALGNAEIAQLKKDGVV 448
>gi|319764946|ref|YP_004128883.1| l-carnitine dehydratase/bile acid-inducible protein f
[Alicycliphilus denitrificans BC]
gi|317119507|gb|ADV01996.1| L-carnitine dehydratase/bile acid-inducible protein F
[Alicycliphilus denitrificans BC]
Length = 414
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 135/281 (48%), Positives = 184/281 (65%), Gaps = 9/281 (3%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TEL 270
PLS VR+LDLTR++AGP+ T +LADLGA+VIKVE+P+ GD+ R WGPP++ + T
Sbjct: 4 PLSRVRVLDLTRVLAGPWSTQMLADLGADVIKVERPILGDDTRHWGPPWIKDEAGESTTD 63
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
S YF+ NRNK+S+ +D +GQ++I++LAK CDVLVEN+ G L R L Y+ L +N
Sbjct: 64 SAYFSSTNRNKRSIAIDLSKADGQRLIRELAKGCDVLVENYKVGDLKRHGLSYEDLKAVN 123
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLAT 386
LIYCSVTG+G GPY ++PGYD I GGL+ I G P G P K IA D+ T
Sbjct: 124 PALIYCSVTGYGQDGPYAEKPGYDFIFQGEGGLMSINGEEDGKPGGGPMKTSIAITDVLT 183
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANV 446
GL A A++AAL H+ TG+GQ ID +LL T V N +Y +G KRWG +H N+
Sbjct: 184 GLNATIAILAALEHRRNTGEGQHIDVSLLDTIVHFGSNQIVSYFTSGEVPKRWGNAHPNL 243
Query: 447 VPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
P+Q F+TS+G++ I G+D Q+ +C + + A DPR+
Sbjct: 244 TPYQSFRTSDGHLIIACGNDGQFVKLCVALGQEQWARDPRF 284
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 63/139 (45%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + + A DPR+ A R NRE L ++ A ++TT WL + P +N
Sbjct: 269 LCVALGQEQWARDPRFARMADRNINREPLIAQLSAIFEKETTAFWLKALEHCDVPNGSIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ +VF + +L H G+I V + S T E PPP +HT VL
Sbjct: 329 TYDKVFEHPQVVARQLKVRQQHAAGGEITTVRNPIRLSKTPIEYLRPPPLRAQHTQEVLS 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L+ E + +L+ +++
Sbjct: 389 SVLDLSERELGRLEAARVI 407
>gi|315499056|ref|YP_004087860.1| l-carnitine dehydratase/bile acid-inducible protein f
[Asticcacaulis excentricus CB 48]
gi|315417068|gb|ADU13709.1| L-carnitine dehydratase/bile acid-inducible protein F
[Asticcacaulis excentricus CB 48]
Length = 373
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 133/286 (46%), Positives = 182/286 (63%), Gaps = 2/286 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL+ +++L+L RI+AGP+ +LADLGA V+KVE+P TGD+ R WGPPF+ E + YF
Sbjct: 10 PLAGLKVLELARILAGPWAGQVLADLGATVVKVERPGTGDDTRGWGPPFIG--EAAAYFH 67
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
NR K S+ +D PEGQ I DLA+ CDVL+ENF G L + L Y+ L +N +L+Y
Sbjct: 68 ACNRGKASLAIDMAKPEGQAAILDLARDCDVLIENFKVGGLRQYGLDYESLQAVNPRLVY 127
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
S+TGFG GPY R GYD I + GL+ ITG PDG P KVG+A +DL TG+Y AV+
Sbjct: 128 VSITGFGQDGPYAQRAGYDYILQGMSGLMDITGDPDGEPQKVGVAVVDLFTGVYTSTAVL 187
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
AAL + TG+G ID L SML N G NYL +G+ R G +H N+ P+QVF
Sbjct: 188 AALRQRDATGRGCHIDMALFDVATSMLANQGMNYLASGVSPTRLGNAHPNIAPYQVFAVK 247
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
+G+V + G+D Q+ +C+V+ ++A +P Y T A +A L+
Sbjct: 248 DGHVIVAVGNDHQFLRLCEVLEADYVAQNPAYATNAGRVAARHQLV 293
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 32/71 (45%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+V+ ++A +P Y T A RV R L E++ T L +G P +N
Sbjct: 264 LCEVLEADYVAQNPAYATNAGRVAARHQLVAELDPFMRSLTRSGLLTALEGAGVPAGPIN 323
Query: 61 SISQVFADEHI 71
I VF D I
Sbjct: 324 RIEDVFNDPQI 334
>gi|421626683|ref|ZP_16067511.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC098]
gi|408695000|gb|EKL40559.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC098]
Length = 405
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 133/284 (46%), Positives = 191/284 (67%), Gaps = 9/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ +T+ +
Sbjct: 4 LNGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPKVGDDTRSWGPPWMKDDSGQDTQEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK SV +D +P+GQ++IK L + DV++EN+ G L + +L Y+ LS IN
Sbjct: 64 AYYQSTNRNKLSVAIDIASPDGQELIKALIQDTDVVIENYKAGSLKKYDLDYESLSAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TGFG GP + PGYD I +GGL+ +TG P G P KVG+A DLATG
Sbjct: 124 KLVYCSITGFGQTGPRAEEPGYDFIIQGMGGLMSVTGERDDLPGGGPQKVGVAFSDLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL+++ TG GQ ID LL Q++ + N G NYL++G KR+G +HAN+V
Sbjct: 184 LYSTIAIQAALLNRHVTGLGQYIDMALLDVQIATMANQGMNYLSSGNIPKRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P+QVFK S+ I G+D Q+ +C+ + L L D R+ A
Sbjct: 244 PYQVFKASDRDFIIACGNDTQFIQLCRSIGLPDLPNDARFARNA 287
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 77/140 (55%), Gaps = 2/140 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + L L D R+ A R+++RE + + + KT +EW+ P +N
Sbjct: 268 LCRSIGLPDLPNDARFARNADRIKHREEIIGILSKHFLTKTADEWVDAIYAAKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q F + + +++ E++H + +K++G + S T E +T PP LGEHT VL
Sbjct: 328 NLEQAFQEPQVIAREMLVEMNHPQREKLKVIGSPIKLSRTPVEYKTAPPLLGEHTQAVLG 387
Query: 121 DLLNYDETTIAKLKEKKILG 140
+++ ++ +A+LKEK ++G
Sbjct: 388 RIVSSEK--LAELKEKGVIG 405
>gi|83310752|ref|YP_421016.1| acyl-CoA transferase/carnitine dehydratase [Magnetospirillum
magneticum AMB-1]
gi|82945593|dbj|BAE50457.1| Predicted acyl-CoA transferase/carnitine dehydratase
[Magnetospirillum magneticum AMB-1]
Length = 447
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 128/279 (45%), Positives = 181/279 (64%), Gaps = 5/279 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTEL 270
PLS++R+LDL+R++AGP+ LLAD+GAEVIKVE+P GD+ R WGPPFL +T
Sbjct: 48 PLSHLRVLDLSRVLAGPWAGQLLADMGAEVIKVERPGEGDDTRGWGPPFLKDGQGGDTGE 107
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
+ YF NR K+SV +DF +GQ++++ LA + DV++ENF G L + L Y L +
Sbjct: 108 AAYFLSANRGKRSVTIDFTQAQGQELVRRLAARSDVVLENFKVGGLAKYGLDYASLKAVK 167
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYA 390
L+YCS+TGFG GPY R GYD + +GGL+ +TG P G P KVG+A D+ TG+YA
Sbjct: 168 PDLVYCSITGFGQDGPYAQRAGYDFLIQGMGGLMSLTGEPGGQPMKVGVALTDIFTGMYA 227
Query: 391 HGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQ 450
A++AAL + +TG+G +ID LL QV++L N NYL G KR G +H N+VP+Q
Sbjct: 228 GFAILAALAKRDRTGEGSQIDLALLDVQVAVLANQATNYLVGGATPKRLGNAHPNIVPYQ 287
Query: 451 VFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
F T++G++ + G+D Q++ C L DPR+ T
Sbjct: 288 AFATADGHIILAVGNDGQFRRFCHTAGRPELGADPRFAT 326
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 55/139 (39%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C L DPR+ T RV NR L +EA + + W+ + P +N
Sbjct: 309 FCHTAGRPELGADPRFATNVERVRNRAELVPLLEALLTSRPSARWIAELEEAGVPCGPIN 368
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ VFAD + L + H G I +V + + Q PP LG T VL
Sbjct: 369 DLANVFADPQVIHRGLRTRLDHPLAGGIDLVANPIRFDGAQALSDRAPPLLGADTAEVLG 428
Query: 121 DLLNYDETTIAKLKEKKIL 139
L + +L+E ++
Sbjct: 429 GWLGMGADEMERLRENGVV 447
>gi|187921083|ref|YP_001890115.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
phytofirmans PsJN]
gi|187719521|gb|ACD20744.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
phytofirmans PsJN]
Length = 415
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 134/294 (45%), Positives = 189/294 (64%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
LS +R+LDL+RI+AGP+ T LLADLGA+V+KVE+P GD+ R WGPPF + S
Sbjct: 5 LSGIRVLDLSRILAGPWSTQLLADLGADVVKVERPGGGDDTRAWGPPFAPGGDGTPSAES 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NR K+S+ VDF EGQ I+++LAK DV++EN G + R L Y+ L +N
Sbjct: 65 AYFLAANRGKRSIAVDFSVAEGQDIVRELAKTADVVIENLKCGDMQRYGLDYESLRCLNP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHIT----GHPDGPPCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + ++GGL+ IT G P G P K G+ D+ TG
Sbjct: 125 KLIYCSITGFGQTGPYSKRAGYDFVIQAMGGLMSITGESDGRPGGGPQKCGVPISDMMTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA +++AL + +G+GQ ID +LL TQV L N G NYL +G +RWG +H N+
Sbjct: 185 MYATVGILSALHERQTSGEGQYIDMSLLDTQVGWLANHGLNYLVSGSPARRWGNAHPNLC 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F +GY+ I G+D+Q+Q +C+V+++ +A D R+ T + LA L+
Sbjct: 245 PYQAFPAIDGYLIIAVGNDRQFQSLCRVLSMSTVASDSRFSTNSGRLANRDSLV 298
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+V+++ +A D R+ T + R+ NR+ L + IE + +EWL + + P +N
Sbjct: 269 LCRVLSMSTVASDSRFSTNSGRLANRDSLVELIEQRLRTGNRDEWLEMLEQAGVPAGPIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++++ AD + +V + H + + + +S T E PPP LGEHT VL
Sbjct: 329 TVAEALADPQVISRGMVFSMKHTMGASVPQIANPIKFSRTAIEYHRPPPMLGEHTAEVLA 388
Query: 121 DLLNYDETTIAKLKEKKILGLI 142
+ T L E G+I
Sbjct: 389 SI----GLTAGNLDELHAAGVI 406
>gi|386009825|ref|YP_005928102.1| formyl-CoA transferase [Pseudomonas putida BIRD-1]
gi|313496531|gb|ADR57897.1| Formyl-CoA transferase [Pseudomonas putida BIRD-1]
Length = 406
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 134/294 (45%), Positives = 191/294 (64%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE-----LS 271
LS++R+LDL+R++AGP+ +LADLGA+VIKVE+P +GD+ R WGPPFL + E +
Sbjct: 4 LSHLRVLDLSRVLAGPWSGQILADLGADVIKVERPGSGDDTRSWGPPFLKDVEGEDTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF EGQ+++++LA +CD+++ENF G L L Y+ L +N
Sbjct: 64 AYYLSANRNKRSVTIDFTQSEGQRLVRELAAKCDIVIENFKVGGLAAYGLDYQSLKAVNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
QLIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 QLIYCSITGFGQTGPYARRAGYDFMIQGLGGLMSLTGRPEGEEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ +TG GQ +D LL QV+ L N NYL G +R G +H N+V
Sbjct: 184 LYSTVAMLAALAHRDQTGVGQHVDMALLDVQVACLANQAMNYLTTGTPPRRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ T L +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDSQFRKFAEVAGQPQWAEDPRFATNKLRVANRAELI 297
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 66/139 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ T LRV NR L I T+ KTT EW+ + P +N
Sbjct: 268 FAEVAGQPQWAEDPRFATNKLRVANRAELIPLIRQATVFKTTAEWVAQLEAAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+++Q+F D + L I H G + V + S T E R PP LGEHT+ VL
Sbjct: 328 NLAQMFQDPQVLARGLALNIPHPLAGSVPQVASPIRLSETPVEYRRAPPLLGEHTEAVLG 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
++L D + +L+ +L
Sbjct: 388 EVLGLDVGEVQRLRGAGVL 406
>gi|121592568|ref|YP_984464.1| L-carnitine dehydratase/bile acid-inducible protein F [Acidovorax
sp. JS42]
gi|120604648|gb|ABM40388.1| L-carnitine dehydratase/bile acid-inducible protein F [Acidovorax
sp. JS42]
Length = 428
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 138/284 (48%), Positives = 190/284 (66%), Gaps = 10/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
L ++R+LDL+R++AGP+CT LAD+GA+VIK+E+P GD+ R WGPPF + +E +
Sbjct: 18 LGHLRVLDLSRVLAGPWCTQNLADMGADVIKIEKPGDGDDTRHWGPPFFPDADGQPSEHA 77
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NRNK+SV VD TPEGQ++I++LA+Q DV+VENF G L R L Y+ LS +N
Sbjct: 78 CYFAACNRNKRSVTVDMATPEGQRLIRELAQQSDVVVENFKTGGLKRYGLDYESLSALNP 137
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+LIYCSVTGFG GPY R GYD++ ++ GL+ ITGH P G P +VG+A IDL TG
Sbjct: 138 RLIYCSVTGFGHTGPYAPRAGYDLLIQAMSGLMSITGHADGEPGGGPMRVGVAVIDLFTG 197
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA A++ AL +++TG+GQ ID LL ++L N GA +LNAG KR G +H +VV
Sbjct: 198 MYATTAILGALEVRHRTGRGQHIDMALLDVATAVLANQGAGFLNAGNIPKRQGNTHPSVV 257
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P+Q F T +G + + G+D Q+ C+ A D R+ T A
Sbjct: 258 PYQDFPTQDGNMLLAIGNDGQFARFCEAAGTD-WAGDERFATNA 300
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 13/140 (9%)
Query: 11 ALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEH 70
A D R+ T A RV +RE L + A T + T W+ + + + P +N + Q F D
Sbjct: 291 AGDERFATNAGRVTHRETLIPLMAALTRTRPTAAWIALLEDKAVPCGPINHVGQAFDDAQ 350
Query: 71 IQDIKLVKEISHEKY-------GDI--KIVGPAVAYSLTQPEV--RTPPPALGEHTDYVL 119
++ L + ++Y G++ ++V A L+ V R PPALG+HTD VL
Sbjct: 351 VRARGL--RVEQQRYPGAQPPAGEVVNRVVTTASPLRLSDTPVTLRYAPPALGQHTDEVL 408
Query: 120 KDLLNYDETTIAKLKEKKIL 139
++ L D + L+ +++L
Sbjct: 409 RERLGLDAAQLQALRAQRVL 428
>gi|358635085|dbj|BAL22382.1| CoA-transferase [Azoarcus sp. KH32C]
Length = 407
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 140/282 (49%), Positives = 186/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+RI+AGP+ T +LADLGA+VIKVE+P GD+ R WGPPFL +T ++
Sbjct: 5 LSHIRVLDLSRILAGPWSTQILADLGADVIKVERPGEGDDTRHWGPPFLKDEAGEDTSVA 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ C NRNK+S+ VD PEGQ+I++ LA +CDV+VENF G L + L Y L EIN
Sbjct: 65 AYYLCANRNKRSITVDMTQPEGQRILRALAAECDVVVENFKVGGLKKYGLDYASLKEINP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+L+YCS+TGFG GPY R GYD + +GGL+ +TG PDG P KVG+A D+ TG
Sbjct: 125 RLVYCSITGFGQDGPYAPRAGYDFLIQGLGGLMSLTGRPDGEAGAGPIKVGVALTDILTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA A+ AAL + ++G GQ ID LL QV+ L N NYL G R G +H N+V
Sbjct: 185 LYAANAIQAALAWRERSGYGQHIDLALLDVQVACLANQAMNYLTTGKSPGRLGNAHPNIV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F T +GY+ + G+D Q+ C+V LA DPR+ T
Sbjct: 245 PYQDFPTDDGYMILAIGNDGQFARFCEVAGDPALATDPRFST 286
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 72/139 (51%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V LA DPR+ T RVENR L + T+ + T EW+ + V+ P +N
Sbjct: 269 FCEVAGDPALATDPRFSTNRARVENRATLIPLLNKLTIRRPTAEWIRALESVAVPCGPIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+++ VFAD ++ L E+ H G + V + +S T + R PPP LGEHTD VL
Sbjct: 329 TLADVFADPQVEARGLRVEMPHPLAGRVPQVANPMRFSSTPVQYRNPPPLLGEHTDDVLA 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
LL I +L++ ++
Sbjct: 389 SLLGLAPGEITRLRDDNVI 407
>gi|407695175|ref|YP_006819963.1| formyl-CoA transferase [Alcanivorax dieselolei B5]
gi|407252513|gb|AFT69620.1| Formyl-CoA transferase [Alcanivorax dieselolei B5]
Length = 410
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 137/282 (48%), Positives = 182/282 (64%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE-----LS 271
LS++R+LDL+R++AGP+ +L DLGAEVIKVE+P GD+ R WGPP+ + E S
Sbjct: 5 LSHLRVLDLSRVLAGPWAGQILGDLGAEVIKVERPGGGDDTRIWGPPYAKDAEGHDSDQS 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ C NRNKKSV +D PEGQ ++++LA Q DV++ENF G L R L Y+ LS N
Sbjct: 65 AYYLCTNRNKKSVAIDIAHPEGQALVRELAAQSDVVIENFKKGGLRRYGLDYESLSADNP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
LIYCS+TGFG GPY RPGYD + ++GGL+ ITGH DG P KVG+A D+ TG
Sbjct: 125 GLIYCSITGFGQTGPYASRPGYDFLIQAMGGLMSITGHRDGEPGAGPMKVGVALTDITTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++ AL H+ +TG+GQ ID LL Q++ L N NYL G R G +H +VV
Sbjct: 185 LYSTIAILGALEHRNRTGEGQHIDMALLDVQIACLANQTLNYLTTGQAPTRMGNAHPSVV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F T++G V + G+D Q+ C+V A D RY T
Sbjct: 245 PYQDFPTADGDVILAIGNDGQFARFCEVAGHPEWAADDRYAT 286
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 73/140 (52%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V A D RY T RV+NR+ L + T+ +TT+EW+ + + P VN
Sbjct: 269 FCEVAGHPEWAADDRYATNRARVDNRDTLIPLMRQATVMRTTKEWIEVLEQAGVPCGPVN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI+ VF D H+Q + E+SH G + V + S + E RT PP LGEHTD VL
Sbjct: 329 SIADVFQDPHVQARGMQLEMSHPSLGTVPQVASPLRLSASPVEYRTAPPLLGEHTDEVLA 388
Query: 121 DLLNYDETTIAKLKEKKILG 140
+ L I +L+ ++I G
Sbjct: 389 ETLGLSAEAIQRLRAERIAG 408
>gi|104779426|ref|YP_605924.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
entomophila L48]
gi|95108413|emb|CAK13107.1| putative L-carnitine dehydratase/bile acid-inducible protein F
[Pseudomonas entomophila L48]
Length = 406
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 135/294 (45%), Positives = 190/294 (64%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
LS++R+LDL+R++AGP+ +LADLGA+VIKVE+P +GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWSGQILADLGADVIKVERPGSGDDTRSWGPPFLRDAQGENTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++++LA + D+++ENF G L L Y+ L +N
Sbjct: 64 AYYLSANRNKRSVTIDFTQPEGQRLVRELAAKSDIVIENFKVGGLAGYGLDYQSLKAVNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
QLIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 QLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPEGEEGAGPMKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ +TG GQ ID LL QV+ L N NYL G +R G +H N+V
Sbjct: 184 LYSTVAILAALAHRDQTGVGQHIDMALLDVQVACLANQAMNYLTTGTAPRRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ T +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAEVAGQPQWADDPRFATNKQRVANRAELI 297
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 65/139 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ T RV NR L I T+ KTT +W+ + P +N
Sbjct: 268 FAEVAGQPQWADDPRFATNKQRVANRAELIPLIRQATVFKTTAQWIDELEKAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++++F D + L ++ H G + V + S T E R PP LGEHT+ VL
Sbjct: 328 DLARMFQDPQVLARGLAVKMDHPLAGSVPQVASPIRLSQTPVEYRQAPPLLGEHTEVVLA 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
D+L D + +L+ +L
Sbjct: 388 DVLGLDAGAVERLRAAGVL 406
>gi|389680667|ref|ZP_10172017.1| CoA-transferase, family III, partial [Pseudomonas chlororaphis O6]
gi|388555772|gb|EIM19015.1| CoA-transferase, family III, partial [Pseudomonas chlororaphis O6]
Length = 340
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 189/294 (64%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWAGQILADLGAEVIKVERPGNGDDTRAWGPPFLKDAYGENTTEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++++LA + D+L+ENF G L L Y+ L +N
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQRLVRELAAKSDILIENFKVGGLAAYGLDYQSLKALNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 DLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPEGDEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ +G GQ ID LL QV+ L N NYL G+ KR G +H N+V
Sbjct: 184 LYSTVAILAALAHRQHSGGGQHIDMALLDVQVACLANQAMNYLTTGVAPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ T L +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAEVAGQPQWADDPRFATNKLRVANRAVLI 297
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ T LRV NR +L I T+ KTT EW+ + P +N
Sbjct: 268 FAEVAGQPQWADDPRFATNKLRVANRAVLIPLIRQATVFKTTAEWVTQLEQAGVPCGPIN 327
Query: 61 SISQVFADEHIQ 72
++Q+F D ++
Sbjct: 328 DLAQMFEDPQVK 339
>gi|121592492|ref|YP_984388.1| L-carnitine dehydratase/bile acid-inducible protein F [Acidovorax
sp. JS42]
gi|120604572|gb|ABM40312.1| L-carnitine dehydratase/bile acid-inducible protein F [Acidovorax
sp. JS42]
Length = 415
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 189/294 (64%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
L +V++LDL+R++AGP+ L DLGAEVIKVE+P +GD+ R WGPP++ + T S
Sbjct: 12 LQHVKVLDLSRVLAGPWAAQTLGDLGAEVIKVERPGSGDDTRAWGPPYVTDPAGQPTGES 71
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ C NRNK+SV +DF PEGQ++++ LA+QCDVLVENF G L + L Y LS +N
Sbjct: 72 AYYMCTNRNKQSVTIDFIRPEGQELVRRLAQQCDVLVENFKTGGLAQYGLDYASLSALNP 131
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+L+YCS+TGFG GPY R GYD + +GGL+ +TG PDG P KVG+A ++ TG
Sbjct: 132 RLVYCSITGFGQSGPYAHRAGYDFLIQGMGGLMSVTGRPDGEDGGGPMKVGVALTNILTG 191
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA A++AAL + TG+GQ ID LL V+ L N G NYL G +R G +H N V
Sbjct: 192 LYASTAILAALQAREHTGRGQHIDLALLDVGVACLANQGMNYLYGGKVPQRMGNAHPNTV 251
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G++ + G+D Q+ +C + A D R+ T A +A L+
Sbjct: 252 PYQDFPTADGHMILAVGNDGQFARLCHAVGQPGWAQDARFATNAARVAHRDELV 305
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + A D R+ T A RV +R+ L I T+ K T +W+ + + + P +N
Sbjct: 276 LCHAVGQPGWAQDARFATNAARVAHRDELVALIRGVTVGKPTRDWIALLEQHAVPCGPIN 335
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ +VF D ++ L + H + G + +V + S T R PP LG+HTD VL+
Sbjct: 336 TVREVFEDPQVRARGLQIRMEHPRAGAVPLVASPMRLSDTPVTYRHTPPQLGQHTDTVLR 395
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ L I L+ + ++
Sbjct: 396 EHLGLAPEAIDALRAQGVV 414
>gi|330946262|ref|XP_003306726.1| hypothetical protein PTT_19934 [Pyrenophora teres f. teres 0-1]
gi|311315638|gb|EFQ85162.1| hypothetical protein PTT_19934 [Pyrenophora teres f. teres 0-1]
Length = 1101
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 134/297 (45%), Positives = 198/297 (66%), Gaps = 10/297 (3%)
Query: 206 LALSSENPS-LPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPF 264
LA ++ N S LPL+ +++LD+TR++AGP+CT +L DLGA+VIK+E P GD+ R WGPP+
Sbjct: 33 LATAATNASNLPLAGIKVLDMTRVLAGPYCTQILGDLGADVIKIEHPTRGDDTRAWGPPY 92
Query: 265 ---LNNTE---LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDR 318
+NN E S Y+ VNRNK+S+ + F+ P G I+ L K+CDVLVEN++PG L +
Sbjct: 93 AKYINNQEGPGESAYYLGVNRNKRSIGLSFQHPAGVDILHRLVKECDVLVENYLPGSLAK 152
Query: 319 LNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVG 378
+ Y +S+IN +IY S+TG+G GPY++R GYD++ + GL+HITG DGPP KVG
Sbjct: 153 YAMDYDTVSKINPGIIYASITGYGQTGPYRNRAGYDVMVEAEFGLMHITGTRDGPPVKVG 212
Query: 379 IASIDLATGLYAHGAVMAALLHKYKT--GKGQKIDCNLLSTQVSMLINVGANYLNAG-IE 435
+A DL TGLY +++AAL + K KGQ ID L QV+ L N+ ++ L +G +
Sbjct: 213 VAVTDLTTGLYTSNSIIAALFRRLKNPKSKGQHIDVALSDCQVATLANIASSSLISGKRD 272
Query: 436 GKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
RWGTSH ++VP++ FKT++G + +G G+D+ Y +C + LD ++ T A+
Sbjct: 273 TGRWGTSHPSIVPYKAFKTADGDILLGGGNDRLYGVLCNRLGKPEWILDEKFKTNAM 329
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 82/140 (58%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + LD ++ T A+RV++R+ L + IE +T +KTT+E L +F+G PYA +N
Sbjct: 309 LCNRLGKPEWILDEKFKTNAMRVKHRDELEELIETETRKKTTKELLDVFEGSGMPYAAIN 368
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I EHI +VKE+ H G IK+V V +S ++PE+R PPP LG+HT+ +L
Sbjct: 369 DIQDTLNHEHILARNMVKEVEHPACGPIKLVNTPVKWSESKPEIRLPPPTLGQHTNEILG 428
Query: 121 DLLNYDETTIAKLKEKKILG 140
D L + + L+ + ++
Sbjct: 429 DTLGMSKDEVEGLRAEGVVA 448
>gi|396473203|ref|XP_003839289.1| similar to caib/baif family protein [Leptosphaeria maculans JN3]
gi|312215858|emb|CBX95810.1| similar to caib/baif family protein [Leptosphaeria maculans JN3]
Length = 456
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 132/286 (46%), Positives = 187/286 (65%), Gaps = 9/286 (3%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE------ 269
PL+ +++LD+TR++AGP+CT +L DLGAE+IK+E P GD+ R WGPP L T+
Sbjct: 52 PLAGIKVLDMTRVLAGPYCTQILGDLGAEIIKIEHPTRGDDTRAWGPPDLPYTDGVERAF 111
Query: 270 --LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLS 327
S Y+ VNRNKKSV + F TP G ++ L +QCDVLVEN++PG L + +L Y LS
Sbjct: 112 PGESAYYLSVNRNKKSVGLAFNTPSGISLLHSLVQQCDVLVENYLPGSLAKYSLDYATLS 171
Query: 328 EINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATG 387
+N L+Y SVTG+G GPY +R GYD++ + GL+HITG +GPP KVG+A D+ TG
Sbjct: 172 VLNPSLVYASVTGYGQTGPYSNRAGYDVMVEAEMGLMHITGERNGPPVKVGVAVTDIMTG 231
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGI-EGKRWGTSHANV 446
+Y + AAL + TG GQ ID +L QV+ L N+ ++ L G + RWGT+HA V
Sbjct: 232 MYTAIGIQAALFSRATTGLGQHIDASLSDVQVASLANIASSALVTGKGDSGRWGTAHATV 291
Query: 447 VPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
VP++ +KT N + +G +D+ Y+ +C+ + A DPR+LT AL
Sbjct: 292 VPYRAYKTKNTNIAVGGCNDRLYRILCEKLGKPEWATDPRFLTNAL 337
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 84/139 (60%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + A DPR+LT ALRV++R+ L IEA+ +TTE WL +F G PYA VN
Sbjct: 317 LCEKLGKPEWATDPRFLTNALRVKHRDTLDALIEARLQTQTTEHWLRVFDGSGMPYAAVN 376
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I EH+ +++E++H+ G +K+V V YS +P +R+ PP LGEHTD VL
Sbjct: 377 DIKATMEHEHVLARGMIEEVAHKACGTVKLVNHPVKYSRVEPRIRSAPPLLGEHTDEVLG 436
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L E IA L+EK ++
Sbjct: 437 GMLGLGEAEIAGLREKGVV 455
>gi|241662426|ref|YP_002980786.1| L-carnitine dehydratase/bile acid-inducible protein F [Ralstonia
pickettii 12D]
gi|240864453|gb|ACS62114.1| L-carnitine dehydratase/bile acid-inducible protein F [Ralstonia
pickettii 12D]
Length = 406
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 135/282 (47%), Positives = 185/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDLTR++AGP+C LAD GA+VIKVE+P GD+ R WGPP+L NNT +
Sbjct: 4 LSHLRVLDLTRVLAGPWCAQNLADFGADVIKVERPGAGDDTRTWGPPWLKDEAGNNTAEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+S+ VD TPEGQ I++ LA DV++EN+ G+L + L Y L +
Sbjct: 64 AYYLAANRNKRSITVDISTPEGQDIVRKLAAHADVVLENYKVGQLKKYGLDYASLKAVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCS+TGFG GPY R GYD I +GG + +TG P G P K G+A DL TG
Sbjct: 124 DLVYCSITGFGQTGPYAARAGYDFIVQGMGGFMSLTGERDDLPGGGPQKAGVAISDLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA AV+AAL H+ +TG+GQ ID LL QV+ML N+ NYL +G KRWG +H N+V
Sbjct: 184 MYATVAVLAALAHRDRTGEGQYIDMALLDVQVAMLANMNTNYLASGQAPKRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+ +NG++ + G+D Q++ + + LA DPR+ T
Sbjct: 244 PYQTFQAANGWIIVAVGNDGQFRRFVEAGGIPELADDPRFAT 285
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 69/134 (51%)
Query: 6 NLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQV 65
+ LA DPR+ T RV NR++L + EW+ + P +NS+ +V
Sbjct: 273 GIPELADDPRFATNPQRVANRDVLVPILAEMVKRFGKGEWIDKLEAAGVPCGPINSLDEV 332
Query: 66 FADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNY 125
F +E +Q L ++ H G +K+VG V S T P+ + PP LGEHT+ VL+D+LN
Sbjct: 333 FDNEQVQARGLRVDLPHPSAGTVKLVGSPVKMSATPPKAASHPPLLGEHTEAVLRDVLNL 392
Query: 126 DETTIAKLKEKKIL 139
+ L+ + ++
Sbjct: 393 SADQVDSLRRRGVI 406
>gi|262278685|ref|ZP_06056470.1| acyl-CoA transferase/carnitine dehydratase [Acinetobacter
calcoaceticus RUH2202]
gi|262259036|gb|EEY77769.1| acyl-CoA transferase/carnitine dehydratase [Acinetobacter
calcoaceticus RUH2202]
Length = 405
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 134/284 (47%), Positives = 189/284 (66%), Gaps = 9/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
L+ +R+LDL+R++AGP+C LADLGAEVIK+E+P GD+ R WGPP++ N T+ +
Sbjct: 4 LNGIRVLDLSRVLAGPWCGQTLADLGAEVIKIERPKVGDDTRSWGPPWMKNDSGFDTQEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK SV +D +P+GQ++IK L + DV++EN+ G L + L Y+ LS IN
Sbjct: 64 AYYQSTNRNKLSVAIDIASPDGQELIKALIQDTDVVIENYKAGSLKKYGLDYESLSAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TGFG GP + PGYD I +GGL+ +TG P G P KVG+A DLATG
Sbjct: 124 KLVYCSITGFGQTGPRAEEPGYDFIIQGMGGLMSVTGERDDLPGGGPQKVGVAFSDLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL+++ TG GQ ID LL Q++ + N G NYL++G KR+G +HAN+V
Sbjct: 184 LYSTIAIQAALLNRHVTGLGQYIDMALLDVQIATMANQGMNYLSSGNIPKRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P+QVFK S+ I G+D Q+ +C+ + L L D R+ A
Sbjct: 244 PYQVFKASDRDFIIACGNDTQFIQLCRSIGLPDLPNDARFARNA 287
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 74/142 (52%), Gaps = 5/142 (3%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + L L D R+ A R+++R+ + + + + KT +EW+ P +N
Sbjct: 268 LCRSIGLPDLPNDARFARNADRIKHRDEIIEILSNHFLTKTADEWVDAIYAAKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q F + + +++ E++H + +KI+G + S T E +T PP LGEHT VL
Sbjct: 328 NLEQAFQEPQVIAREMLVEMNHPQREKLKIIGSPIKLSRTPVEYKTAPPLLGEHTQVVLG 387
Query: 121 DLLNYDETTIAKLKEKKILGLI 142
++ ++ KL E K G+I
Sbjct: 388 RIV-----SLEKLDELKKKGVI 404
>gi|421151513|ref|ZP_15611125.1| hypothetical protein PABE171_0467 [Pseudomonas aeruginosa ATCC
14886]
gi|404527196|gb|EKA37369.1| hypothetical protein PABE171_0467 [Pseudomonas aeruginosa ATCC
14886]
Length = 407
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 134/282 (47%), Positives = 187/282 (66%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIK+E+P +GD+ R WGPPFL N+T +
Sbjct: 5 LSHIRVLDLSRVLAGPWAGQILADLGAEVIKIERPGSGDDTRAWGPPFLKDAEGNDTSEA 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNKKSV VDF PEGQ+I+++LA + D+L+ENF G L L Y+ L ++N
Sbjct: 65 AYYLSANRNKKSVTVDFTQPEGQRIVRELAAKADILLENFKVGGLKAYGLDYESLKQVNP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ ITG D P KVG+A D+ TG
Sbjct: 125 KLIYCSITGFGQSGPYAKRAGYDFMIQGLGGLMSITGRADNEEGAGPVKVGVALTDILTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ AV+AAL H+ +G GQ ID LL QV+ L N NYL G+ +R G +H N+V
Sbjct: 185 LYSSTAVLAALAHRDVSGIGQHIDMALLDVQVACLANQTLNYLTTGVPPRRLGNAHPNIV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F T++G + + G+D Q++ ++ + A DPR+ T
Sbjct: 245 PYQDFPTADGDMILTVGNDSQFRKFAELADHPEWADDPRFAT 286
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 70/129 (54%)
Query: 11 ALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEH 70
A DPR+ T RV NRE+L I T+ TT EW+L + P +N ++QVFAD
Sbjct: 279 ADDPRFATNKARVANREVLIPLIRQATVLHTTAEWMLSLERAGVPCGPINDLAQVFADPQ 338
Query: 71 IQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETTI 130
+Q L E+ H G + V + S T E R PPP LG+HTD VL+ LL D +
Sbjct: 339 VQARGLRVELPHPLAGTVPQVASPIRLSETPVEYRNPPPTLGQHTDEVLETLLGLDAAAL 398
Query: 131 AKLKEKKIL 139
+L++ K++
Sbjct: 399 ERLRDGKVI 407
>gi|451849533|gb|EMD62836.1| hypothetical protein COCSADRAFT_93056 [Cochliobolus sativus ND90Pr]
Length = 436
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 134/287 (46%), Positives = 187/287 (65%), Gaps = 9/287 (3%)
Query: 215 LPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPP---FLNNTEL- 270
LPL+ V++LD+TR++AGP+CT +L DLGA+VIK+E P GD+ R WGPP +++ E
Sbjct: 31 LPLAGVKVLDMTRVLAGPYCTQILGDLGADVIKIEHPTRGDDTRSWGPPNAPYIDGVERQ 90
Query: 271 ----STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHL 326
S Y+ VNRNKKSV + F P G I+ L +QCDVLVEN++PG L + L Y L
Sbjct: 91 FPGESAYYLSVNRNKKSVGLAFNNPTGTSILHKLVQQCDVLVENYLPGSLAKYKLDYATL 150
Query: 327 SEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLAT 386
S +N LIY SVTG+G GPY+DR GYD++ + GL+HITG DGPP KVG+A D+ T
Sbjct: 151 SALNPSLIYASVTGYGQTGPYRDRAGYDVMVEAEMGLMHITGERDGPPVKVGVAVTDIMT 210
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGI-EGKRWGTSHAN 445
G+Y + AAL + TG GQ ID +L QVS L N+ ++ L G + RWGT+HA
Sbjct: 211 GMYTAIGIQAALYARKSTGLGQWIDASLSDVQVSGLANIASSALVTGKGDSGRWGTAHAT 270
Query: 446 VVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
VVP++ + T + + +G +D+ ++ +C ++ A DPR+LT AL
Sbjct: 271 VVPYRAYATKDTNIAVGGCNDRLFKILCDKLSHPEWATDPRFLTNAL 317
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 88/139 (63%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ A DPR+LT ALRV++R +L +EA+ KTT+EWL IF+G PYA VN
Sbjct: 297 LCDKLSHPEWATDPRFLTNALRVQHRTILDDMVEAELKTKTTKEWLNIFEGSGMPYAAVN 356
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I EH+ +++E+ H+ G +K+V V YS +P++R PPP LGEHTD VLK
Sbjct: 357 DIKATVEHEHVLARGMIEEVDHKALGKVKLVNHPVKYSRAEPKIRMPPPLLGEHTDEVLK 416
Query: 121 DLLNYDETTIAKLKEKKIL 139
++L Y E I +L++ I+
Sbjct: 417 EVLGYGEDEIKELRDTGIV 435
>gi|421746623|ref|ZP_16184406.1| L-carnitine dehydratase/bile acid-inducible protein F [Cupriavidus
necator HPC(L)]
gi|409774821|gb|EKN56386.1| L-carnitine dehydratase/bile acid-inducible protein F [Cupriavidus
necator HPC(L)]
Length = 387
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 134/287 (46%), Positives = 182/287 (63%), Gaps = 8/287 (2%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE----LST 272
LS +++LDL+RI+AGP+CT LADLGAEV K+E P GD+ R WGPP+L + + +S
Sbjct: 6 LSGIKVLDLSRILAGPWCTQNLADLGAEVTKIEHPERGDDTRGWGPPYLQSADGSERMSA 65
Query: 273 YFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQ 332
YF C NR K+S+ +DF T EG+ I LA Q DVLVENF G L R L Y L N +
Sbjct: 66 YFACCNRGKRSLAIDFTTAEGKAAILALADQADVLVENFKAGTLQRYGLDYASLQARNPR 125
Query: 333 LIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATGL 388
L+Y S+TGFG GP D+PGYD + +GGL+ TG PDG P + G+A +DL+TG+
Sbjct: 126 LVYLSITGFGQSGPMADKPGYDYVFQGMGGLMSYTGQPDGEPGEGPLRTGVAVVDLSTGM 185
Query: 389 YAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVP 448
YA AV+AAL + TG+GQ +D LL V++ N GANYL +G R G +H N P
Sbjct: 186 YATSAVLAALFQRQATGEGQHLDIALLDVAVALNANQGANYLFSGRNPPRSGNAHPNCAP 245
Query: 449 HQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILA 495
++VF+ ++G++ + G+D Q+ C V L L DPRY T + +A
Sbjct: 246 YEVFRCADGHLILAIGNDAQFARFCDVAGLADLPADPRYRTNSARIA 292
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 5/118 (4%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C V L L DPRY T + R+ N L + ++ +W F P+ ++
Sbjct: 269 FCDVAGLADLPADPRYRTNSARIANLPALRTLLAQVFATRSRRQWTDAFDAADVPWGPIH 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIV-GPAVAYSLTQPEVRTP---PPALGEH 114
SI +VFA ++ L++ H G I +V P + S T TP PP LGEH
Sbjct: 329 SIEEVFAHPQVRHRGLLRHAEHPVLGRIPMVRNPMLPGSSTDTPA-TPLAAPPLLGEH 385
>gi|399006347|ref|ZP_10708873.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM17]
gi|398122268|gb|EJM11865.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM17]
Length = 406
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 188/294 (63%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWAGQILADLGAEVIKVERPGNGDDTRAWGPPFLKDAYGENTTEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++++LA + D+L+ENF G L L Y+ L +N
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQRLVRELAAKSDILIENFKVGGLAAYGLDYQSLKALNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 NLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPEGDEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ G GQ ID LL QV+ L N NYL G+ KR G +H N+V
Sbjct: 184 LYSTVAILAALAHRQHDGGGQHIDMALLDVQVACLANQAMNYLTTGVAPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ T L +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAEVAGQPQWADDPRFATNKLRVANRAVLI 297
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 67/139 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ T LRV NR +L I T+ KTT EW+ + P +N
Sbjct: 268 FAEVAGQPQWADDPRFATNKLRVANRAVLIPLIRQATVFKTTAEWVAQLEQAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++Q+F D ++ L E+ H G + V + S T E R PP LGEHT VL+
Sbjct: 328 DLAQMFEDPQVKARGLAIELPHALAGLVPQVASPIRLSETPVEYRYAPPLLGEHTAQVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L + ++ L+ ++
Sbjct: 388 RVLGLELESVDALRASGVV 406
>gi|425896788|ref|ZP_18873379.1| CoA-transferase, family III [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397881840|gb|EJK98328.1| CoA-transferase, family III [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 406
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 188/294 (63%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWAGQILADLGAEVIKVERPGNGDDTRAWGPPFLKDAYGENTTEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++++LA + D+L+ENF G L L Y+ L +N
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQRLVRELAAKSDILIENFKVGGLAAYGLDYQSLKALNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 NLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPEGDEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ G GQ ID LL QV+ L N NYL G+ KR G +H N+V
Sbjct: 184 LYSTVAILAALAHRQHDGGGQHIDMALLDVQVACLANQAMNYLTTGVAPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ T L +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAEVAGQPQWADDPRFATNKLRVANRAVLI 297
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 66/139 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ T LRV NR +L I T+ K T EW+ + P +N
Sbjct: 268 FAEVAGQPQWADDPRFATNKLRVANRAVLIPLIRQVTVFKATAEWVAQLELAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++Q+F D ++ L E+ H G + V + S T E R PP LGEHT VL+
Sbjct: 328 DLAQMFEDPQVKARGLAIELPHVLAGLVPQVASPIRLSETPVEYRYAPPLLGEHTAQVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L + ++ L+ +L
Sbjct: 388 RVLGLELESVDALRASGVL 406
>gi|445428200|ref|ZP_21437935.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC021]
gi|444762266|gb|ELW86635.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC021]
Length = 405
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 134/284 (47%), Positives = 189/284 (66%), Gaps = 9/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ +T+ +
Sbjct: 4 LNGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPKVGDDTRSWGPPWMKDDSGQDTQEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK SV +D PEGQ++IK L + DV++EN+ G L + L Y+ LS IN
Sbjct: 64 AYYQSTNRNKLSVAIDIANPEGQELIKALIQDTDVVIENYKAGSLKKYGLDYESLSAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TGFG GP + PGYD I +GGL+ +TG P G P KVG+A DLATG
Sbjct: 124 KLVYCSITGFGQTGPRAEEPGYDFIIQGMGGLMSVTGERDDLPGGGPQKVGVAFSDLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL+++ TG GQ ID LL Q++ + N G NYL++G KR+G +HAN+V
Sbjct: 184 LYSTIAIQAALLNRHVTGLGQYIDMALLDVQIATMANQGMNYLSSGNIPKRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P+QVFK S+ I G+D Q+ +C+ + L L D R+ A
Sbjct: 244 PYQVFKASDRDFIIACGNDTQFIQLCRSIGLPDLPNDARFARNA 287
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 78/140 (55%), Gaps = 2/140 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + L L D R+ A R+++R+ + ++ + KT +EW+ P +N
Sbjct: 268 LCRSIGLPDLPNDARFARNADRIKHRDEIIGILQTHFLTKTADEWVDAIYAAKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q F + + +++ E++H + +KI+G + S T E +T PP LGEHT +L
Sbjct: 328 NLEQAFQEPQVIAREMLVEMNHPQRKKLKIIGSPIKLSRTPVEYKTAPPLLGEHTQAILG 387
Query: 121 DLLNYDETTIAKLKEKKILG 140
+++ ++ +A+LKEK ++G
Sbjct: 388 RVVSTEK--LAELKEKGVIG 405
>gi|367022024|ref|XP_003660297.1| hypothetical protein MYCTH_2298437 [Myceliophthora thermophila ATCC
42464]
gi|347007564|gb|AEO55052.1| hypothetical protein MYCTH_2298437 [Myceliophthora thermophila ATCC
42464]
Length = 447
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 132/282 (46%), Positives = 182/282 (64%), Gaps = 9/282 (3%)
Query: 215 LPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-------- 266
LPL R+LD+TR++AGP+CT +L DLGAEVIK+E PV GD+ R WGPP+
Sbjct: 42 LPLEGYRVLDMTRVLAGPYCTQILGDLGAEVIKIEHPVRGDDTRAWGPPYATYKPGSSQE 101
Query: 267 NTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHL 326
S YF VNRNKKS+ + F+ P G ++ LA +CD+LVEN++PG L + L Y+ +
Sbjct: 102 GPGESAYFLGVNRNKKSLALSFQDPAGVDVLHKLAAKCDILVENYIPGSLKKYGLDYETI 161
Query: 327 SEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLAT 386
+IN LIY S+TG+G GPY RPGYD++ + GL+HITG DGPP KVG+A DL T
Sbjct: 162 HKINPALIYASITGYGQTGPYSQRPGYDVMVEAEFGLMHITGSRDGPPVKVGVAVTDLTT 221
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAG-IEGKRWGTSHAN 445
GLY ++MAALL + +TGKGQ ID L Q L N+ ++ L +G + RWGT+H +
Sbjct: 222 GLYTSNSIMAALLARARTGKGQHIDAALSDCQTVTLANIASSCLISGEKDTGRWGTAHPS 281
Query: 446 VVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
+VP++ FKT +G V G G+DK + +C + DP++
Sbjct: 282 IVPYRSFKTKDGDVLFGGGNDKLFGILCDGLGRPEWKDDPKF 323
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 84/139 (60%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + DP++ A RV NR+ L IEA T+ KTT+EWL IF+G PYA VN
Sbjct: 308 LCDGLGRPEWKDDPKFKINASRVANRDELEAMIEAITVTKTTQEWLDIFEGKGMPYAAVN 367
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I EH + +V E+ HE+ G IK++ + YS ++P +R+PPP LG+HTD +L+
Sbjct: 368 DIQGTLTHEHTKARNMVVEVDHEECGTIKLLNTPIKYSESKPRIRSPPPTLGQHTDEILR 427
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ L D+ I +L+EK ++
Sbjct: 428 EHLGMDDAQIQELREKGVI 446
>gi|260553739|ref|ZP_05826010.1| acyl-CoA transferase/carnitine dehydratase [Acinetobacter sp.
RUH2624]
gi|424056049|ref|ZP_17793570.1| hypothetical protein W9I_02419 [Acinetobacter nosocomialis Ab22222]
gi|425741063|ref|ZP_18859221.1| CoA-transferase family III protein [Acinetobacter baumannii WC-487]
gi|260405139|gb|EEW98638.1| acyl-CoA transferase/carnitine dehydratase [Acinetobacter sp.
RUH2624]
gi|407441675|gb|EKF48179.1| hypothetical protein W9I_02419 [Acinetobacter nosocomialis Ab22222]
gi|425493549|gb|EKU59780.1| CoA-transferase family III protein [Acinetobacter baumannii WC-487]
Length = 405
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 134/284 (47%), Positives = 189/284 (66%), Gaps = 9/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ +T+ +
Sbjct: 4 LNGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPKVGDDTRSWGPPWMKDDSGQDTQEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK SV +D PEGQ++IK L + DV++EN+ G L + L Y+ LS IN
Sbjct: 64 AYYQSTNRNKLSVAIDIANPEGQELIKALIQDTDVVIENYKAGSLKKYGLDYESLSAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TGFG GP + PGYD I +GGL+ +TG P G P KVG+A DLATG
Sbjct: 124 KLVYCSITGFGQTGPRAEEPGYDFIIQGMGGLMSVTGERDDLPGGGPQKVGVAFSDLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL+++ TG GQ ID LL Q++ + N G NYL++G KR+G +HAN+V
Sbjct: 184 LYSTIAIQAALLNRHVTGLGQYIDMALLDVQIATMANQGMNYLSSGNIPKRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P+QVFK S+ I G+D Q+ +C+ + L L D R+ A
Sbjct: 244 PYQVFKASDRDFIIACGNDTQFIQLCRSIGLPDLPNDARFARNA 287
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 77/140 (55%), Gaps = 2/140 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + L L D R+ A R+++R + ++ + KT +EW+ P +N
Sbjct: 268 LCRSIGLPDLPNDARFARNADRIKHRNEIIGILQTHFLTKTADEWVDAIYAAKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q F + + +++ E++H + +KI+G + S T E +T PP LGEHT +L
Sbjct: 328 NLEQAFQEPQVIAREMLVEMNHPQRKKLKIIGSPIKLSRTPVEYKTAPPLLGEHTQAILG 387
Query: 121 DLLNYDETTIAKLKEKKILG 140
+++ ++ +A+LKEK ++G
Sbjct: 388 RVVSTEK--LAELKEKGVIG 405
>gi|409422234|ref|ZP_11259339.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
sp. HYS]
Length = 406
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 135/294 (45%), Positives = 189/294 (64%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIKVE+P +GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWSGQILADLGAEVIKVERPGSGDDTRAWGPPFLKDAYGENTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+S+ +DF PEGQ+++++LA + DVL+ENF G L L Y+ L IN
Sbjct: 64 AYYLAANRNKRSLTIDFTQPEGQRLVRELAAKSDVLIENFKVGGLAAYGLDYESLKAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+L+YCSVTGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 RLVYCSVTGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPEGEEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ + G GQ +D LL QV+ L N NYL G +R G +H N+V
Sbjct: 184 LYSTVAILAALAHRDRDGGGQHVDMALLDVQVACLANQAMNYLTTGTPPRRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ T +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAEVAGQPQWADDPRFATNKQRVANRAELI 297
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 69/139 (49%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ T RV NR L I T+ KTT EW+ + P +N
Sbjct: 268 FAEVAGQPQWADDPRFATNKQRVANRAELIPLIRQATVFKTTAEWVAQLEQAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++Q+FAD ++ L E+ H G + V + S T E R PP LGEHT+ +L
Sbjct: 328 DLAQMFADPQVKARGLAIEMPHPLAGQVPQVASPIRLSETPVEYRHAPPLLGEHTEQILG 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
++L + I +L+E K++
Sbjct: 388 EVLGLAASEIERLREAKVV 406
>gi|451992707|gb|EMD85186.1| hypothetical protein COCHEDRAFT_1119771 [Cochliobolus
heterostrophus C5]
Length = 455
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 134/287 (46%), Positives = 187/287 (65%), Gaps = 9/287 (3%)
Query: 215 LPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPP---FLNNTEL- 270
LPL+ V++LD+TR++AGP+CT +L DLGA+VIK+E P GD+ R WGPP +++ E
Sbjct: 50 LPLAGVKVLDMTRVLAGPYCTQILGDLGADVIKIEHPTRGDDTRSWGPPNAPYVDGVERQ 109
Query: 271 ----STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHL 326
S Y+ VNRNKKSV + F P G I+ L +QCDVLVEN++PG L + L Y L
Sbjct: 110 FPGESAYYLSVNRNKKSVGLAFNNPTGTSILHKLVQQCDVLVENYLPGSLAKYKLDYATL 169
Query: 327 SEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLAT 386
S +N LIY SVTG+G GPY+DR GYD++ + GL+HITG DGPP KVG+A D+ T
Sbjct: 170 SALNPSLIYASVTGYGQTGPYRDRAGYDVMVEAEMGLMHITGERDGPPVKVGVAVTDIMT 229
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGI-EGKRWGTSHAN 445
G+Y + AAL + TG GQ ID +L QVS L N+ ++ L G + RWGT+HA
Sbjct: 230 GMYTAIGIQAALYARKSTGLGQWIDASLSDVQVSGLANIASSALVTGKGDSGRWGTAHAT 289
Query: 446 VVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
VVP++ + T + + +G +D+ ++ +C ++ A DPR+LT AL
Sbjct: 290 VVPYRAYATKDTNIAVGGCNDRLFKILCDKLSHPEWATDPRFLTNAL 336
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 87/139 (62%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ A DPR+LT ALRV++R +L +E + KTT+EWL IF+G PYA VN
Sbjct: 316 LCDKLSHPEWATDPRFLTNALRVQHRTILDDMVETELKTKTTKEWLDIFEGSGMPYAAVN 375
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I EH+ +++E+ H+ G +K+V V YS +P++R PPP LGEHTD VL+
Sbjct: 376 DIKATVEHEHVLARGMIEEVDHKALGKVKLVNHPVKYSRAEPKIRMPPPLLGEHTDEVLR 435
Query: 121 DLLNYDETTIAKLKEKKIL 139
++L Y E I +L++ I+
Sbjct: 436 EVLGYGEDEIKELRDTGIV 454
>gi|429216333|ref|YP_007174323.1| acyl-CoA transferase/carnitine dehydratase [Caldisphaera lagunensis
DSM 15908]
gi|429132862|gb|AFZ69874.1| putative acyl-CoA transferase/carnitine dehydratase [Caldisphaera
lagunensis DSM 15908]
Length = 401
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 130/291 (44%), Positives = 194/291 (66%), Gaps = 11/291 (3%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTY 273
SL LS +++LD TR ++GPF TM+L DLGA++IKVE P GDE R W PP +N LS+Y
Sbjct: 5 SLILSGIKVLDFTRAMSGPFATMVLGDLGADIIKVEPP-EGDESRSWKPPDING--LSSY 61
Query: 274 FTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQL 333
F +NRNK+S+ VD K +G++II +AK+ DV++ENF PG ++L + YK +S IN +
Sbjct: 62 FISINRNKRSIVVDLKNEKGKEIIHKIAKKVDVVIENFKPGTANKLGIDYKTISSINPSI 121
Query: 334 IYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGA 393
IY S++ +G GP+KD+PGYD+ + GLL + G D PP K G+ +D+ +GLYA +
Sbjct: 122 IYVSLSAYGQTGPWKDKPGYDLTVMATSGLLSLNGEKDRPPVKYGVPIVDITSGLYAVIS 181
Query: 394 VMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFK 453
+++AL ++ KTG GQ ID ++ Q+ +L + +YL G +R G++H N+ P+QVFK
Sbjct: 182 ILSALYYREKTGIGQYIDLSMYDAQLQILSHQALSYLTTGKNPERLGSAHPNIAPYQVFK 241
Query: 454 TSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTG--------ALILAM 496
+GYV I G+D Q++ MC+V+N+ +L DPR+ T AL+L M
Sbjct: 242 AKDGYVVIAVGNDNQWKRMCEVLNMNYLLNDPRFKTNPDRVRNRDALVLEM 292
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 80/139 (57%), Gaps = 1/139 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
MC+V+N+ +L DPR+ T RV NR+ L E+E + +E + + V P A VN
Sbjct: 260 MCEVLNMNYLLNDPRFKTNPDRVRNRDALVLEMEKVLENISVKEIIDKLESVGVPVAPVN 319
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
S+++ +E + ++V E+ H+K G IK+ G +++T ++R PPP LGE+T +LK
Sbjct: 320 SVAEALNNEQTKSREMVVEVEHKKIGKIKVPGTPFKFTITPGKIRYPPPLLGENTTEILK 379
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ + + I L + K++
Sbjct: 380 E-FGFSDGEINDLLKNKVI 397
>gi|302660704|ref|XP_003022028.1| hypothetical protein TRV_03845 [Trichophyton verrucosum HKI 0517]
gi|291185954|gb|EFE41410.1| hypothetical protein TRV_03845 [Trichophyton verrucosum HKI 0517]
Length = 446
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 139/316 (43%), Positives = 199/316 (62%), Gaps = 14/316 (4%)
Query: 191 NENKISLYENFYSLDLA---LSSENPS---LPLSNVRILDLTRIIAGPFCTMLLADLGAE 244
N +K+S + N + A S+ PS LPL+ +R+LD+TR++AGP+CT +L DLGAE
Sbjct: 12 NTDKLSRFANNKAFTAACKRYSTAAPSADTLPLAGIRVLDMTRVLAGPYCTQILGDLGAE 71
Query: 245 VIKVEQPVTGDECRKWGPPFLNNTE-------LSTYFTCVNRNKKSVCVDFKTPEGQQII 297
V+K+E P GD+ R WGPP+ + S Y+ VNRNKKSV + F G +I+
Sbjct: 72 VVKIEHPTRGDDTRAWGPPYAKYKDDTKEGPGESAYYLGVNRNKKSVGLSFAHESGIEIL 131
Query: 298 KDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIA 357
LAK+ DV VEN++PG L + + Y+ L IN +LIY SVTG+G GPY R GYD++
Sbjct: 132 HKLAKESDVFVENYIPGSLKKYKMDYESLRAINPRLIYASVTGYGQTGPYSKRAGYDVMV 191
Query: 358 ASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLST 417
+ GL+HITG DGPP KVG+A DL TGLY A+MAAL+ + +TGKGQ ID L
Sbjct: 192 EAEMGLMHITGSRDGPPVKVGVAVTDLTTGLYTSNAIMAALIARGRTGKGQHIDACLSDC 251
Query: 418 QVSMLINVGANYLNAG-IEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVM 476
Q++ L N+ ++ L +G + RWGT+H ++VP++ FKT +G + +G G+D+ + +C +
Sbjct: 252 QIATLANLASSALISGEKDSGRWGTAHPSIVPYRSFKTKDGDILLGGGNDRLFGVLCDRL 311
Query: 477 NLQHLALDPRYLTGAL 492
D R+ T AL
Sbjct: 312 GHPEWKTDARFTTNAL 327
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 81/139 (58%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + D R+ T ALRV+NRE++ IE T ++TT+EWL + +G PYA VN
Sbjct: 307 LCDRLGHPEWKTDARFTTNALRVKNREIIDNLIEDLTEQRTTQEWLEVMEGSGMPYAAVN 366
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I H+ +V+E+ H G IK+V V YS P +RTPPP LG+HTD VL
Sbjct: 367 DIQGALNHSHVLARGMVQEVDHPDCGPIKLVNTPVKYSHATPGIRTPPPTLGQHTDEVLS 426
Query: 121 DLLNYDETTIAKLKEKKIL 139
+++ YD+ IA+LK I+
Sbjct: 427 NVMGYDKEKIAQLKADGIV 445
>gi|440464813|gb|ELQ34178.1| hypothetical protein OOU_Y34scaffold00790g6 [Magnaporthe oryzae
Y34]
gi|440490557|gb|ELQ70102.1| hypothetical protein OOW_P131scaffold00083g36 [Magnaporthe oryzae
P131]
Length = 1695
Score = 282 bits (721), Expect = 3e-73, Method: Composition-based stats.
Identities = 135/303 (44%), Positives = 192/303 (63%), Gaps = 11/303 (3%)
Query: 201 FYSLDLALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKW 260
YS A + +LPL R+LD+TR++AGP+CT +L DLGAEVIK+E PV GD+ R W
Sbjct: 322 LYSSAAAKPNSAGALPLEGYRVLDMTRVLAGPYCTQILGDLGAEVIKIEHPVRGDDTRAW 381
Query: 261 GPPF--------LNNTE--LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVEN 310
GPP+ L T S Y+ VNRNKKS+ + F+ P G +I+ L +CD+LVEN
Sbjct: 382 GPPYAAYKPDSPLAGTSPGESAYYLTVNRNKKSIGLSFQDPAGVEILHKLMAKCDILVEN 441
Query: 311 FVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHP 370
++PG L + L Y ++IN LIY S+TG+G GPY DR GYD++ + GL+HITG
Sbjct: 442 YLPGALKKYKLDYATAAKINPSLIYASITGYGQTGPYSDRAGYDVMVEAEFGLMHITGTR 501
Query: 371 DGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYL 430
DGPP KVG+A DL TGLY ++MAALL + K+G+GQ +D L Q + L N+ ++ L
Sbjct: 502 DGPPVKVGVAVTDLTTGLYTSNSIMAALLARQKSGRGQHLDVALSDCQTATLANIASSCL 561
Query: 431 NAGIEGK-RWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+G + RWGT+H ++VP++ F+T + V +G G+D+ + +C + L + RY T
Sbjct: 562 ISGKKDTGRWGTAHPSIVPYRAFQTRDSAVLLGGGNDRLFAVLCDRIGRPDLKTNERYTT 621
Query: 490 GAL 492
AL
Sbjct: 622 NAL 624
Score = 110 bits (275), Expect = 2e-21, Method: Composition-based stats.
Identities = 55/139 (39%), Positives = 79/139 (56%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L + RY T ALRV++R+ L ++IEA T +TT+EWL + G PYA VN
Sbjct: 604 LCDRIGRPDLKTNERYTTNALRVQHRDELEEQIEAVTRSRTTQEWLDVLAGCGMPYAAVN 663
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ EH +V E+ H G +K+V V YS + P +RT PP LG+HT+ VL
Sbjct: 664 DVQGALNHEHTIARDMVVEVEHPSCGTVKMVNTPVKYSESTPGIRTAPPTLGQHTNEVLG 723
Query: 121 DLLNYDETTIAKLKEKKIL 139
+LL D I L+EK ++
Sbjct: 724 ELLGMDGEQIEGLREKGVV 742
>gi|309780931|ref|ZP_07675670.1| CAIB/BAIF family protein [Ralstonia sp. 5_7_47FAA]
gi|404394153|ref|ZP_10985957.1| hypothetical protein HMPREF0989_02520 [Ralstonia sp. 5_2_56FAA]
gi|308920234|gb|EFP65892.1| CAIB/BAIF family protein [Ralstonia sp. 5_7_47FAA]
gi|348614495|gb|EGY64042.1| hypothetical protein HMPREF0989_02520 [Ralstonia sp. 5_2_56FAA]
Length = 406
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 135/282 (47%), Positives = 184/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDLTR++AGP+C LAD GA+VIKVE+P GD+ R WGPP+L NNT +
Sbjct: 4 LSHLRVLDLTRVLAGPWCAQNLADFGADVIKVERPGAGDDTRTWGPPWLKDEAGNNTAEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+S+ VD TPEGQ I++ LA DV++EN+ G+L + L Y L +
Sbjct: 64 AYYLAANRNKRSITVDISTPEGQDIVRQLAAHADVVLENYKVGQLKKYGLDYASLKAVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCS+TGFG GPY R GYD I +GG + +TG P G P K G+A DL TG
Sbjct: 124 DLVYCSITGFGQTGPYAPRAGYDFIVQGMGGFMSLTGERDDLPGGGPQKAGVAISDLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA AV+AAL H+ +TG+GQ ID LL QV+ML N+ NYL +G KRWG +H N+V
Sbjct: 184 MYATVAVLAALAHRDRTGEGQYIDMALLDVQVAMLANMNTNYLASGEAPKRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+ +NG++ + G+D Q++ + LA DPR+ T
Sbjct: 244 PYQTFQAANGWIIVAVGNDGQFRRFVDAGGMPELADDPRFAT 285
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 68/134 (50%)
Query: 6 NLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQV 65
+ LA DPR+ T RV NR++L + EW+ + P +NS+ +V
Sbjct: 273 GMPELADDPRFATNPQRVANRDVLVPILAEMVKRFGKGEWIDKLEAAGVPCGPINSLDEV 332
Query: 66 FADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNY 125
F +E +Q L ++ H G +K+VG V S T P+ + PP LGEHT VL+D+LN
Sbjct: 333 FDNEQVQARGLRVDLPHPSAGTVKLVGSPVKMSATPPKAASHPPLLGEHTGAVLRDVLNL 392
Query: 126 DETTIAKLKEKKIL 139
+ L+ + ++
Sbjct: 393 SADQVDSLRRRGVI 406
>gi|83309915|ref|YP_420179.1| acyl-CoA transferase/carnitine dehydratase [Magnetospirillum
magneticum AMB-1]
gi|82944756|dbj|BAE49620.1| Predicted acyl-CoA transferase/carnitine dehydratase
[Magnetospirillum magneticum AMB-1]
Length = 403
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 128/279 (45%), Positives = 181/279 (64%), Gaps = 5/279 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTEL 270
PLS++R+LDL+R++AGP+ LLAD+GAEVIKVE+P GD+ R WGPPFL +T
Sbjct: 4 PLSHLRVLDLSRVLAGPWAGQLLADMGAEVIKVERPGEGDDTRGWGPPFLKDGQGGDTGE 63
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
+ YF NR K+SV +DF +GQ++++ LA + DV++ENF G L + L Y L +
Sbjct: 64 AAYFLSANRGKRSVTIDFTQAQGQELVRRLAARSDVVLENFKVGGLAKYGLDYASLKAVK 123
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYA 390
L+YCS+TGFG GPY R GYD + +GGL+ +TG P G P KVG+A D+ TG+YA
Sbjct: 124 PDLVYCSITGFGQDGPYAQRAGYDFLIQGMGGLMSLTGEPGGQPMKVGVALTDIFTGMYA 183
Query: 391 HGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQ 450
A++AAL + +TG+G +ID LL QV++L N NYL G KR G +H N+VP+Q
Sbjct: 184 GFAILAALAKRDRTGEGSQIDLALLDVQVAVLANQATNYLVGGATPKRLGNAHPNIVPYQ 243
Query: 451 VFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
F T++G++ + G+D Q++ C L DPR+ T
Sbjct: 244 AFATADGHIILAVGNDGQFRRFCHTAGRPELGADPRFAT 282
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 55/139 (39%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C L DPR+ T RV NR L +EA + + W+ + P +N
Sbjct: 265 FCHTAGRPELGADPRFATNVERVRNRAELVPLLEALLTSRPSARWIAELEEAGVPCGPIN 324
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ VFAD + L + H G I +V + + Q PP LG T VL
Sbjct: 325 DLANVFADPQVIHRGLRTRLDHPLAGGIDLVANPIRFDGAQALSDRAPPLLGADTAEVLG 384
Query: 121 DLLNYDETTIAKLKEKKIL 139
L + +L+E ++
Sbjct: 385 GWLGMGADEMERLRENGVV 403
>gi|423098225|ref|ZP_17086021.1| CoA-transferase, family III [Pseudomonas fluorescens Q2-87]
gi|397882875|gb|EJK99362.1| CoA-transferase, family III [Pseudomonas fluorescens Q2-87]
Length = 406
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 138/294 (46%), Positives = 188/294 (63%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGA+VIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWAGQILADLGADVIKVERPGNGDDTRAWGPPFLKDARGENTTEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++K+LA + D+L+ENF G L L Y+ L IN
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQRLVKELAAKSDILIENFKVGGLAAYGLDYESLKTINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 ELIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPEGDEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ G GQ ID LL QV+ L N NYL G KR G +H N+V
Sbjct: 184 LYSTAAILAALAHRDHEGGGQHIDMALLDVQVACLANQAMNYLTTGNAPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ T L +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAEVAGQPQWADDPRFATNKLRVANRAVLI 297
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 69/139 (49%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ T LRV NR +L I T+ KTT EW++ + P +N
Sbjct: 268 FAEVAGQPQWADDPRFATNKLRVANRAVLIPLIRQATVFKTTAEWVVQLERAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD +Q L E+ H G + V + S T E R PP LGEHT VL+
Sbjct: 328 DLAQVFADPQVQARGLAMELPHVLAGKVPQVASPIRLSETPVEYRNAPPLLGEHTLEVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L DE + KE +L
Sbjct: 388 RVLGLDEMAVTAFKEAGVL 406
>gi|424743522|ref|ZP_18171832.1| CoA-transferase family III protein [Acinetobacter baumannii WC-141]
gi|422943356|gb|EKU38378.1| CoA-transferase family III protein [Acinetobacter baumannii WC-141]
Length = 405
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 133/284 (46%), Positives = 190/284 (66%), Gaps = 9/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ +T+ +
Sbjct: 4 LNGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPKVGDDTRSWGPPWMKDDSGQDTQEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK SV +D +P+GQ++IK L + DV++EN+ G L + L Y+ LS IN
Sbjct: 64 AYYQSTNRNKLSVAIDIASPDGQELIKALIQDTDVVIENYKAGSLKKYGLDYESLSAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TGFG GP + PGYD I +GGL+ +TG P G P KVG+A DLATG
Sbjct: 124 KLVYCSITGFGQNGPRAEEPGYDFIIQGMGGLMSVTGERDDLPGGGPQKVGVAFSDLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL+++ TG GQ ID LL Q++ + N G NYL++G KR+G +HAN+V
Sbjct: 184 LYSTIAIQAALLNRHVTGLGQYIDMALLDVQIATMANQGMNYLSSGNIPKRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P+QVFK S+ I G+D Q+ +C+ + L L D R+ A
Sbjct: 244 PYQVFKASDRDFIIACGNDTQFIQLCRSIGLPDLPNDARFARNA 287
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 78/140 (55%), Gaps = 2/140 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + L L D R+ A R+++R+ + ++ + KT +EW+ P +N
Sbjct: 268 LCRSIGLPDLPNDARFARNADRIKHRDEIIGILQTHFLTKTADEWVDAIYAAKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q F + + +++ E++H + +K++G + S T E +T PP LGEHT VL
Sbjct: 328 NLEQAFQEPQVIAREMLVEMNHSQREKLKVIGSPIKLSRTPVEYKTAPPLLGEHTQVVLG 387
Query: 121 DLLNYDETTIAKLKEKKILG 140
+++ ++ +A+LK+K ++G
Sbjct: 388 RVISSEK--LAELKDKGVIG 405
>gi|445423751|ref|ZP_21436723.1| CoA-transferase family III protein [Acinetobacter sp. WC-743]
gi|444755315|gb|ELW79903.1| CoA-transferase family III protein [Acinetobacter sp. WC-743]
Length = 405
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 134/280 (47%), Positives = 186/280 (66%), Gaps = 9/280 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ +R+LDL+R++AGP+C +LADLGAEVIKVE+P GD+ R WGPP++ +T +
Sbjct: 4 LNGIRVLDLSRVLAGPWCGQILADLGAEVIKVERPKLGDDTRSWGPPWMKDDAGQDTREA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK SV +D PEGQ +IK L + DV++EN+ G L + L Y LSEIN
Sbjct: 64 AYYQSTNRNKLSVAIDIANPEGQALIKALIQDTDVVIENYKTGSLKKYGLDYATLSEINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TGFG GP + PGYD I +GGL+ ITG P G P KVG+A DL+TG
Sbjct: 124 RLVYCSITGFGQNGPRAEEPGYDFIIQGMGGLMSITGEKDDLPGGGPQKVGVAFSDLSTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL+++ TG GQ ID LL Q++ + N G NYL++G +R+G +HAN+V
Sbjct: 184 LYSTIAIQAALLNRHVTGLGQYIDMALLDVQIATMANQGMNYLSSGKIPERYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
P+Q+FK S+ I G+D Q+ +C + L L DPR+
Sbjct: 244 PYQLFKASDREFIIACGNDSQFIQLCNSIGLADLPNDPRF 283
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 70/140 (50%), Gaps = 2/140 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L L DPR+ A R+++RE + + + KT +EW+ P +N
Sbjct: 268 LCNSIGLADLPNDPRFSRNASRIKHREEVIDILSKHFLTKTADEWVNAIYAAKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q F + + +++ E+ H + +VG + S T E R PP LGEHT +L
Sbjct: 328 NLEQAFNEPQVIAREMLVEMPHPLREKMTVVGSPIKLSRTPVEYRNAPPLLGEHTQTILG 387
Query: 121 DLLNYDETTIAKLKEKKILG 140
+++ + A+LK + ++G
Sbjct: 388 RIIS--DEKFAELKAQGVIG 405
>gi|238027797|ref|YP_002912028.1| acyl-CoA transferases/carnitine dehydratase [Burkholderia glumae
BGR1]
gi|237876991|gb|ACR29324.1| putative acyl-CoA transferases/carnitine dehydratase [Burkholderia
glumae BGR1]
Length = 406
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 129/282 (45%), Positives = 184/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+C LAD GA+VIK+E+P G + R WGPP+ ++T +
Sbjct: 4 LSHIRVLDLSRVLAGPWCAQTLADFGADVIKIERPGAGGDTRHWGPPYHRAADGSDTREA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +D TP+GQ+++++LA Q DV++EN+ G+L + L Y L I
Sbjct: 64 AYYLAANRNKRSVTIDIATPDGQRLVRELAAQSDVVIENYKAGQLQKYGLDYASLRAIKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITG----HPDGPPCKVGIASIDLATG 387
L+YCSVTGFG GPY R GYD I +GG + ITG P G P K G+A DLATG
Sbjct: 124 ALVYCSVTGFGQTGPYAHRAGYDFIIQGLGGFMSITGERDTEPGGGPQKAGVAIADLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA A++AAL H+ +TG+GQ ID LL QV++L N+ NYL +G RWG +H N+V
Sbjct: 184 LYACTAILAALAHRDRTGEGQYIDMALLDVQVALLANMTTNYLASGQPPVRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+ S+G++ + G+D Q++ + LA D R+ T
Sbjct: 244 PYQTFEASDGWIIVAVGNDGQFRKFVEAGGRPELADDTRFAT 285
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 67/130 (51%)
Query: 10 LALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADE 69
LA D R+ T RV +R LL + T +T EW+ + P +N +++VF +E
Sbjct: 277 LADDTRFATNPARVRHRPLLVPILAEMTRGRTRGEWIAALEAAGVPCGPINDLAEVFENE 336
Query: 70 HIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETT 129
+ L + H +K+V V S T PE R+ PP LGEHTD VL +LL YD
Sbjct: 337 QVIARGLQVALPHPSGAPVKLVRNPVQMSATPPEARSAPPLLGEHTDAVLAELLGYDAQA 396
Query: 130 IAKLKEKKIL 139
IA L+ K ++
Sbjct: 397 IAALRGKGVV 406
>gi|254482235|ref|ZP_05095476.1| CAIB/BAIF family protein [marine gamma proteobacterium HTCC2148]
gi|214037560|gb|EEB78226.1| CAIB/BAIF family protein [marine gamma proteobacterium HTCC2148]
Length = 386
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 131/282 (46%), Positives = 184/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
LS++++LDL+RI+AGP+ + +L DLGAEVIKVE P GD+ R+WGPP++ + TE S
Sbjct: 4 LSHIKVLDLSRILAGPWASQVLGDLGAEVIKVENPQGGDDTRQWGPPYMQDEHGHATEES 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF C NRNK+SVC+D +T EGQ +++LA+ CDVL+ENF G + L Y LSE+N
Sbjct: 64 AYFMCANRNKRSVCIDMRTAEGQDKLRELARDCDVLIENFKVGGAAKYGLDYTTLSELNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPC----KVGIASIDLATG 387
L+YCS+TGFG GP +RPGYD + ++GGL+ +TG DG P KVG+A D+ TG
Sbjct: 124 GLVYCSITGFGQDGPLANRPGYDFLVQAMGGLMSVTGAADGEPGAGPQKVGVALTDIMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA + AAL + ++G GQ +D LL + L N NYL G+ R G +H N+V
Sbjct: 184 LYAVIGIQAALADRAQSGLGQHVDLALLDVTAATLANQATNYLVGGLNPTRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F +GY+ + G+D Q++ C+V+ LA D R+ T
Sbjct: 244 PYQSFVAKDGYLIVAVGNDGQFRRYCQVIGAPELADDERFQT 285
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 61/118 (51%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C+V+ LA D R+ T RV NR+ L ++ K +E+ EW+ + + + P +NS
Sbjct: 269 CQVIGAPELADDERFQTNRDRVGNRDALVPLLQVKMLERDKAEWIALLEAANVPAGPINS 328
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVL 119
+ +VFA+ IQ + + H +++VG + S T E R PP LG+H + L
Sbjct: 329 VGEVFAEPQIQARGMQVNLDHPLNSKLQLVGNPIKLSRTPVEYRQAPPTLGQHNEDFL 386
>gi|452983921|gb|EME83679.1| hypothetical protein MYCFIDRAFT_137416 [Pseudocercospora fijiensis
CIRAD86]
Length = 452
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 134/297 (45%), Positives = 197/297 (66%), Gaps = 13/297 (4%)
Query: 209 SSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECR---------K 259
++E+ PL+ + ILD RI+A PFC+ +LAD GA+VIK+EQP TGDE R K
Sbjct: 43 ATESSKAPLAGIHILDFGRILAAPFCSQILADYGADVIKIEQPKTGDETRGYRITNELRK 102
Query: 260 WGPPFLNNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRL 319
W P +S YF +NRNK+S+ +D K G +++ L + DV++ENF+PG+ D+L
Sbjct: 103 WKP---EAQPMSFYFAALNRNKRSITLDLKRKAGVEVVHRLVETADVVLENFIPGRGDKL 159
Query: 320 NLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGI 379
+ Y LS+IN LIYCS++G+G GP R GYD IA + GGL HITG P GPP + G+
Sbjct: 160 GIRYAELSKINPGLIYCSLSGYGHTGPDSGRAGYDAIATAEGGLQHITGDPKGPPVRPGL 219
Query: 380 ASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRW 439
ID++TGL+AHGA+MAAL H+ +TGKGQ IDC+L TQ+SML+N+GAN+LN EG+R+
Sbjct: 220 GMIDMSTGLFAHGAIMAALRHRDQTGKGQHIDCSLFGTQISMLVNIGANWLNMQHEGQRF 279
Query: 440 GTSHANVVPHQVFKTSNG-YVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILA 495
G+ H ++ P V++ +G Y+T+ +D+Q++ + + + L D + T + +A
Sbjct: 280 GSGHPSIHPVGVWQCKDGMYLTLSITNDRQFKLLRERLGHPELPDDVGFATNDMRVA 336
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 3/129 (2%)
Query: 13 DPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEHIQ 72
D + T +RV RE L + + EK +EW+ IF+G VN+I + F Q
Sbjct: 325 DVGFATNDMRVAKREKLDEILSQILREKGVDEWMRIFEGSGLAIGPVNTIQKAFEHPQTQ 384
Query: 73 DIKLVKEISHE--KYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETTI 130
+V+ + + + G+ K +G AV +S +PE+R PP LGEHT+ +L + Y I
Sbjct: 385 ARDMVQSRAWDAVESGEWKAIGSAVKFSEIEPEIRRLPPKLGEHTEEILAE-AGYTREEI 443
Query: 131 AKLKEKKIL 139
+L+ I
Sbjct: 444 ERLRRDGIF 452
>gi|398976272|ref|ZP_10686178.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM25]
gi|398139108|gb|EJM28109.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM25]
Length = 406
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 139/294 (47%), Positives = 187/294 (63%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWAGQILADLGAEVIKVERPGNGDDTRAWGPPFLKDAYGENTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ++++DLA + D+L+ENF G L L Y+ L IN
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQKLVRDLAAKSDILIENFKVGGLAAYGLDYESLKVINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 DLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPEGDEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ G GQ ID LL QV+ L N NYL G KR G +H N+V
Sbjct: 184 LYSTVAILAALAHRDHDGGGQHIDMALLDVQVACLANQAMNYLTTGTAPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ T L +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAEVAGQPQWADDPRFATNKLRVANRAVLI 297
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 67/139 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ T LRV NR +L I T+ KTT EW+ + P +N
Sbjct: 268 FAEVAGQPQWADDPRFATNKLRVANRAVLIPLIRQATVFKTTSEWVAQLEQAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+SQVF D ++ L E+ H G + V + S T E R PP LGEHT VL+
Sbjct: 328 DLSQVFEDPQVKSRGLAIELPHALAGMVPQVASPIRLSRTPVEYRHAPPLLGEHTLEVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L +A +KE +L
Sbjct: 388 RVLGLGAGAVAAMKEDGVL 406
>gi|218295881|ref|ZP_03496661.1| L-carnitine dehydratase/bile acid-inducible protein F [Thermus
aquaticus Y51MC23]
gi|218243619|gb|EED10147.1| L-carnitine dehydratase/bile acid-inducible protein F [Thermus
aquaticus Y51MC23]
Length = 402
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 126/266 (47%), Positives = 180/266 (67%), Gaps = 3/266 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PLS +++LDL+R++AGP CT++LADLGAEV+KVE P GDE R WGPPFL S YF
Sbjct: 3 PLSGIKVLDLSRVLAGPLCTLILADLGAEVVKVEPP-WGDETRGWGPPFLKGE--SAYFL 59
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNR K+S+ +D KT EGQ++++ LA++ D+LVENF G L R L Y+ L +N +LIY
Sbjct: 60 SVNRGKRSLALDLKTQEGQEVVRRLAREADILVENFKTGDLRRFGLDYESLKPLNPRLIY 119
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
S+TGFG GP PGYD G++ +TG P+GPP KVG+A ID+ TG+ AV+
Sbjct: 120 LSITGFGHTGPRAQEPGYDAALQGYTGIMSVTGEPEGPPMKVGVAWIDVMTGMMGAVAVL 179
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
AALL + ++G+GQ ID +L + ++N+G +YL GI KR G +HA +VP+ F
Sbjct: 180 AALLERERSGEGQHIDLSLFDVGLFAMVNLGESYLLTGIPPKRLGNAHAQIVPYGAFPAQ 239
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHL 481
+G++ + G+D+Q+ +C+V+ L L
Sbjct: 240 DGWLILAVGNDEQFARLCQVLELPDL 265
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 3/120 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+V+ L L R+ RVE R+ + + + WL + P A VN
Sbjct: 256 LCQVLELPDLPK--RFPRNQDRVEGRKEVEGALSQVLRTRPRAHWLERLKEAGVPAAPVN 313
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIK-IVGPAVAYSLTQPEVRTPPPALGEHTDYVL 119
I + F+D V ++H G + + P S T PPP LGEHT+ VL
Sbjct: 314 DIEEAFSDPQAGARGAVWTLAHPLLGPLPTLANPLRFLSRTPASPTLPPPLLGEHTEEVL 373
>gi|170724224|ref|YP_001751912.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
putida W619]
gi|169762227|gb|ACA75543.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
putida W619]
Length = 406
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 189/294 (64%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGA+VIKVE+P +GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWSGQILADLGADVIKVERPGSGDDTRAWGPPFLKDEQGENTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++++LA + D+++ENF G L L Y L +N
Sbjct: 64 AYYLSANRNKRSVTIDFTQPEGQRLVRELAAKSDIVIENFKVGGLAAYGLDYASLKSVNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
QLIYCS+TGFG GPY R GYD + +GGL+ +TG PDG P KVG+A D+ TG
Sbjct: 124 QLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPDGEEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL ++ + G GQ ID LL QV+ L N NYL G +R G +H N+V
Sbjct: 184 LYSTVAMLAALANRDQAGIGQHIDMALLDVQVACLANQAMNYLTTGNPPRRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ T L +A S LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAEVAGQSQWADDPRFATNKLRVANRSQLI 297
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 65/139 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ T LRV NR L I T+ KTT EW+ + P +N
Sbjct: 268 FAEVAGQSQWADDPRFATNKLRVANRSQLIPLIRQATVFKTTAEWVSQLEAAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++Q+F D + L + H G + V + S T E R PP LGEHT+ VL
Sbjct: 328 DLAQMFQDPQVLARGLAVSMPHALGGSVPQVASPIRLSETPVEYRRAPPLLGEHTEEVLG 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
D+L D + +L+ +L
Sbjct: 388 DVLGLDGDALGRLRSAGVL 406
>gi|393759155|ref|ZP_10347972.1| hypothetical protein QWA_08541 [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
gi|393162672|gb|EJC62729.1| hypothetical protein QWA_08541 [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
Length = 420
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 128/281 (45%), Positives = 184/281 (65%), Gaps = 9/281 (3%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTEL 270
PL +R+LDLTRI+AGP+CT LADLGA V K+E+P TGD+ R WGPPFL +T
Sbjct: 14 PLEGIRVLDLTRILAGPWCTQNLADLGANVYKIERPETGDDTRAWGPPFLQTPDREDTAE 73
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
+ Y+ NRNK+S+ +D + EG +++ +A++CD+LVENF G L + L Y L IN
Sbjct: 74 AAYYLSANRNKQSISLDIASQEGADVVRAMARECDILVENFKVGGLAKYGLDYASLKAIN 133
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLAT 386
+LIYCS+TGFG GPY +RPGYD + ++GG++ +TG P G P K G+A DL T
Sbjct: 134 PRLIYCSITGFGQTGPYAERPGYDFMIQAMGGMMSLTGERDDKPGGGPQKAGVAVADLMT 193
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANV 446
G+YA +++AAL + ++G GQ ID LL QV+ML N NYL +G KR G +H N+
Sbjct: 194 GMYATSSILAALFERTRSGLGQHIDIALLDCQVAMLANQNMNYLVSGQAPKRAGNAHQNL 253
Query: 447 VPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
VP+QVF T +G++ + G+++Q+ C+ + + D R+
Sbjct: 254 VPYQVFPTEDGHIIVAIGNNRQFAAYCEAIGHPEIVEDSRF 294
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 63/136 (46%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C+ + + D R+ + RV++R+ L + + + + WL + P +N
Sbjct: 280 CEAIGHPEIVEDSRFNINSQRVKHRDELEQILSTAMQKHPSAYWLEALDKIGVPAGPIND 339
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
+ VF+ +Q K+ E+ H + G + + + +S + R PP LGEHTD L+
Sbjct: 340 LHGVFSHPQVQARKMRIELDHSQAGKVSMTASPMRFSDSPVSYRMAPPQLGEHTDQALES 399
Query: 122 LLNYDETTIAKLKEKK 137
LL + + +EK+
Sbjct: 400 LLGAQSPELKQWREKQ 415
>gi|94312738|ref|YP_585947.1| L-carnitine dehydratase/bile acid-inducible protein F [Cupriavidus
metallidurans CH34]
gi|93356590|gb|ABF10678.1| L-carnitine dehydratase/bile acid-inducible protein F
(CoA-transferase family) [Cupriavidus metallidurans
CH34]
Length = 430
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 134/281 (47%), Positives = 190/281 (67%), Gaps = 9/281 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN----TELST 272
LS++R+LDL+R++AGP+CT LAD+GA+VIKVE+P GD+ R WGPP+L + T ++
Sbjct: 21 LSHIRVLDLSRVLAGPWCTQNLADMGADVIKVEKPGAGDDTRHWGPPYLQDEDGPTSQAS 80
Query: 273 YFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQ 332
YF NRNK+SV +D PEGQ++I++LA Q DV++EN+ G L R L Y LS +N +
Sbjct: 81 YFAACNRNKRSVTIDIAKPEGQKLIRELAMQSDVVIENYKTGGLKRYGLDYDSLSALNPR 140
Query: 333 LIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATGL 388
LIYCSVTGFG GPY RPGYD++ ++ GL+ ITG DG P +VG+A ID+ TG+
Sbjct: 141 LIYCSVTGFGQTGPYAARPGYDLLIQAMSGLMSITGQADGEPGAGPVRVGVAVIDVFTGM 200
Query: 389 YAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVP 448
YA A++ AL ++ TG+GQ ID LL +++L N GA YLNAG+ R G +H +VVP
Sbjct: 201 YATTAILGALEARHFTGRGQHIDVALLDVAMAVLANQGAGYLNAGVVPTRQGNTHPSVVP 260
Query: 449 HQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+Q F T +G + + G+D Q+ C+ ++ A D R+ T
Sbjct: 261 YQDFPTQDGDMLLAIGNDGQFVRFCEAADVD-WARDERFAT 300
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 71/150 (47%), Gaps = 14/150 (9%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+ ++ A D R+ T + RV +R L + T + T EW+ + + S P +N
Sbjct: 284 FCEAADVD-WARDERFATNSARVTHRRTLIPMMSEVTRTRPTSEWIRLLEAASVPCGPIN 342
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGD-----------IKIVGPAVAYSLTQPEVRTPPP 109
I+Q FADEH+Q L + E+YG+ I + S T VR PP
Sbjct: 343 DIAQAFADEHVQHRGL--RVEQERYGEAGCPPSDSVNRICSTASPLRLSETPTTVRYAPP 400
Query: 110 ALGEHTDYVLKDLLNYDETTIAKLKEKKIL 139
LG+HTD VL+D L +A L+ K IL
Sbjct: 401 GLGQHTDEVLRDNLKLGSDEVADLRAKGIL 430
>gi|146275846|ref|YP_001166006.1| L-carnitine dehydratase/bile acid-inducible protein F
[Novosphingobium aromaticivorans DSM 12444]
gi|145322537|gb|ABP64480.1| L-carnitine dehydratase/bile acid-inducible protein F
[Novosphingobium aromaticivorans DSM 12444]
Length = 413
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 128/281 (45%), Positives = 188/281 (66%), Gaps = 5/281 (1%)
Query: 212 NPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-TEL 270
+P+ PL+ +R+LDL+R++AGP+CT +L DLGAEVIKVEQP GD+ R+WGPPFL++ +
Sbjct: 6 SPAGPLAGLRVLDLSRVLAGPWCTQILGDLGAEVIKVEQPGQGDDTRRWGPPFLDDGSND 65
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
+ Y+ C NRNK+SV +D P+G +I+ A+ D++VENF G L + L Y + I
Sbjct: 66 AAYYLCANRNKRSVAIDLADPQGAALIRRFAETADIVVENFRVGGLAKYGLDYASVKAIR 125
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLAT 386
+IYCS+TGFG GP ++ GYD + + GL+ +TG PDG P KVG+ DL T
Sbjct: 126 PDVIYCSITGFGQTGPMRNTGGYDFLIQGMSGLMSVTGLPDGEPGGGPMKVGLPVCDLQT 185
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANV 446
GLYA +++AAL H+ +TG+GQ ID LL TQVS+L N +N++N G+ +R G H N
Sbjct: 186 GLYATVSILAALNHRNRTGEGQHIDLALLDTQVSLLANQASNWMNGGMVPRRLGNQHPNT 245
Query: 447 VPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
VP+Q F ++G + + G+D+Q++ ++ L LA DPR+
Sbjct: 246 VPYQDFACADGNILVAIGNDRQFRQFMAMIGLGALADDPRF 286
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 59/142 (41%), Gaps = 2/142 (1%)
Query: 4 VMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSIS 63
++ L LA DPR+ R NR+ L + + E + Q P +VN I
Sbjct: 274 MIGLGALADDPRFAASGGRSVNRDALLGVMRPVIAQWKAAELIAAMQAAGLPGGKVNEIP 333
Query: 64 QVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLL 123
+V I+ LV E+ +K++G S T RT PP GE T VL +L
Sbjct: 334 EVLEHPQIEARGLVHEMERSDGTPVKVLGFPAKLSATPATYRTAPPRSGEDTRAVLTGVL 393
Query: 124 NYDETTIAKLKEKKILGLIERL 145
D I +L ++ ERL
Sbjct: 394 GLDAAEIERLMAAGVIA--ERL 413
>gi|430810060|ref|ZP_19437175.1| L-carnitine dehydratase/bile acid-inducible protein F [Cupriavidus
sp. HMR-1]
gi|429497528|gb|EKZ96059.1| L-carnitine dehydratase/bile acid-inducible protein F [Cupriavidus
sp. HMR-1]
Length = 430
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 134/281 (47%), Positives = 190/281 (67%), Gaps = 9/281 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN----TELST 272
LS++R+LDL+R++AGP+CT LAD+GA+VIKVE+P GD+ R WGPP+L + T ++
Sbjct: 21 LSHIRVLDLSRVLAGPWCTQNLADMGADVIKVEKPGAGDDTRHWGPPYLQDEDGPTSQAS 80
Query: 273 YFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQ 332
YF NRNK+SV +D PEGQ++I++LA Q DV++EN+ G L R L Y LS +N +
Sbjct: 81 YFAACNRNKRSVTIDIAKPEGQKLIRELAMQSDVVIENYKTGGLKRYGLDYDSLSALNPR 140
Query: 333 LIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATGL 388
LIYCSVTGFG GPY RPGYD++ ++ GL+ ITG DG P +VG+A ID+ TG+
Sbjct: 141 LIYCSVTGFGQTGPYAARPGYDLLIQAMSGLMSITGQADGEPGAGPVRVGVAVIDVFTGM 200
Query: 389 YAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVP 448
YA A++ AL ++ TG+GQ ID LL +++L N GA YLNAG+ R G +H +VVP
Sbjct: 201 YATTAILGALEARHFTGRGQHIDVALLDVAMAVLANQGAGYLNAGVVPTRQGNTHPSVVP 260
Query: 449 HQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+Q F T +G + + G+D Q+ C+ ++ A D R+ T
Sbjct: 261 YQDFPTQDGDMLLAIGNDGQFVRFCEAADVD-WARDERFAT 300
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 71/150 (47%), Gaps = 14/150 (9%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+ ++ A D R+ T + RV +R L + T + T EW+ + + S P +N
Sbjct: 284 FCEAADVD-WARDERFATNSARVTHRRTLIPMMSEVTRTRPTSEWIRLLEAASVPCGPIN 342
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGD-----------IKIVGPAVAYSLTQPEVRTPPP 109
I+Q FADEH+Q L + E+YG+ I + S T VR PP
Sbjct: 343 DIAQAFADEHVQHRGL--RVEQERYGEAGCPPSDSVNRICSTASPLRLSETPTTVRYAPP 400
Query: 110 ALGEHTDYVLKDLLNYDETTIAKLKEKKIL 139
LG+HTD VL+D L +A L+ K IL
Sbjct: 401 GLGQHTDEVLRDNLKLGSDEVANLRAKGIL 430
>gi|421466753|ref|ZP_15915431.1| CoA-transferase family III protein [Acinetobacter radioresistens
WC-A-157]
gi|400203051|gb|EJO34045.1| CoA-transferase family III protein [Acinetobacter radioresistens
WC-A-157]
Length = 405
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 134/280 (47%), Positives = 187/280 (66%), Gaps = 9/280 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
L+ +R+LDL+R++AGP+C +LADLGAEVIKVE+P GD+ R WGPP++ N T +
Sbjct: 4 LTGIRVLDLSRVLAGPWCGQILADLGAEVIKVERPQHGDDTRSWGPPWMKNDAGDDTREA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK SV +D + EGQ++IK L + DV++EN+ G L + L Y L+ IN
Sbjct: 64 AYYQSANRNKLSVAIDIASLEGQELIKALIQDTDVVIENYKTGSLKKYGLDYHSLAAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TGFG GP + PGYD I +GGL+ +TG P G P KVG+A DLATG
Sbjct: 124 KLVYCSITGFGQDGPRAEEPGYDFIIQGMGGLMSVTGEKDDLPGGGPQKVGVAFSDLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL++++TG GQ ID LL Q++ L N G NYL +G R+G +HAN+V
Sbjct: 184 LYSTIAIQAALLNRHETGLGQYIDMALLDVQIATLANQGMNYLASGKVPGRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
P+QVFK ++ I G+DKQ+ +C+ + L L DPR+
Sbjct: 244 PYQVFKAADRDFIIACGNDKQFIQLCQSIGLAELPNDPRF 283
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 5/143 (3%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + L L DPR+ A R+++R + + ++KT +EW+ V P +N
Sbjct: 268 LCQSIGLAELPNDPRFSRNADRIKHRNEIIDILSKHFLQKTADEWVTAIHAVKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q F + + K++ E+ H + ++G + S T E R PP LGEHT+ +L
Sbjct: 328 NLEQAFQEPQVVARKMLVEMPHPYKQKLTVIGSPIKMSRTPVEYRRAPPTLGEHTEQILS 387
Query: 121 DLLNYDETTIAKLKEKKILGLIE 143
+ + + LK+ K G+IE
Sbjct: 388 RVASQEH-----LKKLKAEGIIE 405
>gi|404253001|ref|ZP_10956969.1| L-carnitine dehydratase/bile acid-inducible protein F [Sphingomonas
sp. PAMC 26621]
Length = 415
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 129/278 (46%), Positives = 187/278 (67%), Gaps = 5/278 (1%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-NNTELSTYFT 275
L V++LDL+R++AGP+ T +L DLGA+++K+EQP GD+ R+WG P L + + S YF
Sbjct: 15 LEGVKVLDLSRVLAGPWATQMLGDLGADILKIEQPGQGDDTRRWGGPALADGSGDSAYFL 74
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
C NRNK+S+ +D TPEG +I+ LA Q D++VENF G L + L + LS +N +LIY
Sbjct: 75 CANRNKRSLAIDLSTPEGAALIRRLALQSDIVVENFRVGGLAKYGLDHAALSALNPRLIY 134
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATGLYAH 391
CS+TGFG GPY D+ GYD + ++GGL+ ITG PD G P KVG+ +DL TG+YA
Sbjct: 135 CSITGFGQTGPYADKGGYDFLIQAMGGLMSITGLPDGVPGGGPMKVGVPIVDLFTGIYAT 194
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A++AAL H+ TG+GQ IDC LL TQ+SML N + YLN G R G H ++VP++
Sbjct: 195 VAILAALRHRDATGQGQHIDCALLDTQLSMLSNQASRYLNGGAVPGRLGNDHPDIVPYRD 254
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+ ++G + + G+D+Q++D ++ L L DPR+ +
Sbjct: 255 YACADGDIVVALGNDRQFRDFAAILGLGALLEDPRFAS 292
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 58/140 (41%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
++ L L DPR+ + +LR NR L I ++ ++ + P +V
Sbjct: 275 FAAILGLGALLEDPRFASVSLRSANRAALHDLIGPAVARWHVDDLVVAMEAAKLPAGKVQ 334
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I ++ AD + V+ ++ + +++VG V S T PP G T VL
Sbjct: 335 GIPEILADPQVAARGAVQTLARDDGTPLRVVGFPVTLSATPARYDRAPPRAGSDTRAVLG 394
Query: 121 DLLNYDETTIAKLKEKKILG 140
++L E + L ++G
Sbjct: 395 EVLGVSEVELDVLAASGVIG 414
>gi|398986260|ref|ZP_10691448.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM24]
gi|399012673|ref|ZP_10714991.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM16]
gi|398114917|gb|EJM04712.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM16]
gi|398152507|gb|EJM41025.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM24]
Length = 406
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 139/294 (47%), Positives = 187/294 (63%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWAGQILADLGAEVIKVERPGNGDDTRAWGPPFLKDAYGENTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ++++DLA + D+L+ENF G L L Y+ L IN
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQKLVRDLAAKSDILIENFKVGGLAAYGLDYESLKAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 NLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPEGDEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ G GQ ID LL QV+ L N NYL G KR G +H N+V
Sbjct: 184 LYSTVAILAALAHRDHDGGGQHIDMALLDVQVACLANQAMNYLTTGNAPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ T L +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAEVAGQPQWADDPRFATNKLRVANRAVLI 297
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 67/139 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ T LRV NR +L I T+ KTT EW+ + P +N
Sbjct: 268 FAEVAGQPQWADDPRFATNKLRVANRAVLIPLIRQATVFKTTAEWVAQLEQAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+SQVF D ++ L E+ H G + V + S T E R PP LGEHT VL+
Sbjct: 328 DLSQVFEDPQVKARGLAIELPHALAGMVPQVASPIRMSQTPVEYRRAPPLLGEHTLEVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L +A+LK +L
Sbjct: 388 GVLGLGAGAVAELKSAGVL 406
>gi|338737152|ref|YP_004674114.1| L-carnitine dehydratase/bile acid-inducible protein F
[Hyphomicrobium sp. MC1]
gi|337757715|emb|CCB63538.1| L-carnitine dehydratase/bile acid-inducible protein F
[Hyphomicrobium sp. MC1]
Length = 398
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 132/297 (44%), Positives = 193/297 (64%), Gaps = 4/297 (1%)
Query: 208 LSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN 267
++SE+P PL+ +R+L+L R++AGP+ LADLGA VIKVE+P GD+ R WGPPF+ +
Sbjct: 2 MTSESPK-PLAGLRVLELARVLAGPWAGQTLADLGASVIKVERPDGGDDTRAWGPPFIAD 60
Query: 268 TE---LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYK 324
+ + YF NR K+S+ +D+ +P G++ LAKQ DV++ENF G L + L Y
Sbjct: 61 DDGAGSAAYFHATNRGKRSIALDYDSPAGRETAVALAKQADVIIENFKVGGLAKYGLDYP 120
Query: 325 HLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDL 384
+ IN +IYCS+TGFG GPY R GYD I +GG++ +TG PDG P K+G+A D+
Sbjct: 121 AIKAINPGVIYCSITGFGQTGPYAPRAGYDFIVQGMGGIMDLTGAPDGEPQKIGVAFADI 180
Query: 385 ATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHA 444
TG+Y ++AAL + TG+G +D LL TQVS+L N NYL +G +R G +H
Sbjct: 181 FTGIYGTIGILAALNRRNATGEGAHVDMALLDTQVSVLANQAMNYLASGTPPRRLGNAHP 240
Query: 445 NVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
N+VP+QVF+T++G + I G+D Q+ +C ++ L+ LA D R+ T A +A + LI
Sbjct: 241 NIVPYQVFETADGPIIIAAGNDGQFARVCDLLGLKGLAADERFKTNARRVANRAELI 297
>gi|375134344|ref|YP_004994994.1| L-carnitine dehydrogenase [Acinetobacter calcoaceticus PHEA-2]
gi|325121789|gb|ADY81312.1| L-carnitine dehydrogenase [Acinetobacter calcoaceticus PHEA-2]
Length = 405
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 132/284 (46%), Positives = 190/284 (66%), Gaps = 9/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ +T+ +
Sbjct: 4 LNGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPRVGDDTRSWGPPWMKDDSGQDTQEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK SV +D +P+GQ++IK L + DV++EN+ G L + L Y+ LS +N
Sbjct: 64 AYYQSTNRNKLSVAIDIASPDGQELIKALIQDTDVVIENYKAGSLKKYGLDYESLSAVNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TGFG GP + PGYD I +GGL+ +TG P G P KVG+A DLATG
Sbjct: 124 KLVYCSITGFGQTGPRAEEPGYDFIIQGMGGLMSVTGERDDLPGGGPQKVGVAFSDLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL+++ TG GQ ID LL Q++ + N G NYL++G KR+G +HAN+V
Sbjct: 184 LYSTIAIQAALLNRHVTGLGQYIDMALLDVQIATMANQGMNYLSSGNIPKRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P+QVFK S+ I G+D Q+ +C+ + L L D R+ A
Sbjct: 244 PYQVFKASDRDFIIACGNDTQFIQLCRSIGLPDLPNDARFARNA 287
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 78/140 (55%), Gaps = 2/140 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + L L D R+ A R+++R+ + ++ + KT +EW+ P +N
Sbjct: 268 LCRSIGLPDLPNDARFARNADRIKHRDEIIGILQTHFLTKTADEWVDAIYAAKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q F + + +++ E++H + +K++G + S T E +T PP LGEHT VL
Sbjct: 328 NLEQAFQEPQVIAREMLVEMNHPQREKLKVIGSPIKLSRTPVEYKTAPPLLGEHTQAVLG 387
Query: 121 DLLNYDETTIAKLKEKKILG 140
+++ ++ +A+LKEK ++G
Sbjct: 388 RVVSSEK--LAELKEKGVIG 405
>gi|23014759|ref|ZP_00054560.1| COG1804: Predicted acyl-CoA transferases/carnitine dehydratase
[Magnetospirillum magnetotacticum MS-1]
Length = 403
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 130/277 (46%), Positives = 180/277 (64%), Gaps = 5/277 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TEL 270
PLS++R+LDL+R++AGP+ LLADLGAEVIKVE+P GD+ R WGPPFL + T
Sbjct: 4 PLSHLRVLDLSRVLAGPWSGQLLADLGAEVIKVERPGEGDDTRGWGPPFLKDKDGKDTAE 63
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
S Y+ NR K+SV +DF PEGQ++++ LA + D+++ENF G L + L Y L +
Sbjct: 64 SAYYLSTNRGKRSVTIDFTQPEGQELVRRLAAKSDIVLENFKLGGLAKYGLDYAGLKAVK 123
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYA 390
+IYCS+TGFG GPY R GYD + +GGL+ +TG P G P KVG+A D+ TG+YA
Sbjct: 124 PDIIYCSITGFGQDGPYAQRAGYDFLIQGMGGLMSLTGEPGGQPMKVGVALTDIFTGMYA 183
Query: 391 HGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQ 450
AV+AAL H+ +TG GQ ID +LL QV++L N NYL G R G +H N+VP+Q
Sbjct: 184 STAVLAALAHRDRTGVGQHIDLSLLDVQVAVLANQATNYLVGGKVPNRLGNAHPNIVPYQ 243
Query: 451 VFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
F T +G++ + G+D Q++ +V L DP +
Sbjct: 244 AFATKDGHIILAVGNDGQFRRFTQVAGRPELGTDPLF 280
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 61/139 (43%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V L DP + RV NR L +E ++ + W+ + P +N
Sbjct: 265 FTQVAGRPELGTDPLFAANVDRVRNRAQLVPILEELIAQRPSARWIDELEQAGVPCGPIN 324
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ QVFAD ++ + ++H + G++ +V + S T PP+LG + VL
Sbjct: 325 TLDQVFADPQVRHRGMAVNMAHPQAGEVTLVANPIKMSETPVAYDRAPPSLGADSSEVLT 384
Query: 121 DLLNYDETTIAKLKEKKIL 139
LL D + +L K I+
Sbjct: 385 TLLGLDTDELGRLGAKGII 403
>gi|421654995|ref|ZP_16095320.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-72]
gi|408509749|gb|EKK11419.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-72]
Length = 405
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 132/284 (46%), Positives = 190/284 (66%), Gaps = 9/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ +T+ +
Sbjct: 4 LNGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPKVGDDTRSWGPPWMKDDSGQDTQEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK SV +D +P+GQ++IK L + DV++EN+ G L + L Y+ LS +N
Sbjct: 64 AYYQSTNRNKLSVAIDIASPDGQELIKALIQDTDVVIENYKAGSLKKYGLDYESLSAVNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TGFG GP + PGYD I +GGL+ +TG P G P KVG+A DLATG
Sbjct: 124 KLVYCSITGFGQTGPRAEEPGYDFIIQGMGGLMSVTGERDDLPGGGPQKVGVAFSDLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL+++ TG GQ ID LL Q++ + N G NYL++G KR+G +HAN+V
Sbjct: 184 LYSTIAIQAALLNRHVTGLGQYIDMALLDVQIATMANQGMNYLSSGNIPKRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P+QVFK S+ I G+D Q+ +C+ + L L D R+ A
Sbjct: 244 PYQVFKASDRDFIIACGNDTQFIQLCRSIGLPDLPNDARFARNA 287
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 78/140 (55%), Gaps = 2/140 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + L L D R+ A R+++R+ + ++ + KT +EW+ P +N
Sbjct: 268 LCRSIGLPDLPNDARFARNADRIKHRDEIIGILQTHFLTKTADEWVDAIYAAKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q F + + +++ E++H + +K++G + S T E +T PP LGEHT VL
Sbjct: 328 NLEQAFQEPQVIAREMLVEMNHPQRKKLKVIGSPIKLSRTPVEYKTAPPLLGEHTQAVLG 387
Query: 121 DLLNYDETTIAKLKEKKILG 140
+++ ++ +A+LKEK ++G
Sbjct: 388 RVVSSEK--LAELKEKGVIG 405
>gi|448236725|ref|YP_007400783.1| CoA-transferase [Geobacillus sp. GHH01]
gi|445205567|gb|AGE21032.1| CoA-transferase [Geobacillus sp. GHH01]
Length = 393
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 131/273 (47%), Positives = 184/273 (67%), Gaps = 2/273 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L VR+LDL+R++AGP+ TM+L DLGA+VIK+E P D+ R WGPPF N +S Y+T
Sbjct: 5 LDGVRVLDLSRVLAGPYATMILGDLGADVIKIEAPGGSDDTRFWGPPFQNG--MSAYYTA 62
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
VNRNK+SV VD KT +G++ ++ LA+ DV++ NF G +D+ L Y+ LS +N +LIYC
Sbjct: 63 VNRNKRSVTVDLKTEQGRETVRRLAETADVVIHNFKTGTMDKWGLDYEALSRLNPRLIYC 122
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S+TGFG GP PGYD I ++ G + I G D P KVG+A D+ TGLYA AV A
Sbjct: 123 SITGFGETGPLASLPGYDYIIQAMSGWMSINGTADTGPLKVGVAVTDVFTGLYAAIAVEA 182
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
ALL + KTG+GQKID +L VS L+NV ANYL +G + G H N+VP+ ++ S+
Sbjct: 183 ALLAREKTGRGQKIDLSLFDCAVSALVNVAANYLMSGDIPQPLGNEHPNIVPYSTYEASD 242
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
G + I G+D+Q+Q +C +++ + + DPR+ T
Sbjct: 243 GPIVIAVGNDRQFQALCSLLSDRSIGSDPRFQT 275
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 52/116 (44%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C +++ + + DPR+ T RV +R+ L + + + +T EW + P V
Sbjct: 258 LCSLLSDRSIGSDPRFQTNPGRVAHRDELNRRLNEEIKRRTRAEWQRLLAEKGIPCGPVQ 317
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTD 116
++ ++F + + H G +K+V + S T R PPP GEH +
Sbjct: 318 TMDELFRHPQTDARHMTVTMHHPTVGPLKLVASPLKLSGTPVSYRLPPPLAGEHNN 373
>gi|254502166|ref|ZP_05114317.1| CAIB/BAIF family [Labrenzia alexandrii DFL-11]
gi|222438237|gb|EEE44916.1| CAIB/BAIF family [Labrenzia alexandrii DFL-11]
Length = 392
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 135/292 (46%), Positives = 188/292 (64%), Gaps = 5/292 (1%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN----TE 269
+ PL +++++L RI+AGP+ L+DLGA+VIKVE P GD+ R WGPPFLN
Sbjct: 2 TAPLKGIKVVELARILAGPWIGQTLSDLGADVIKVEAP-QGDDTRGWGPPFLNTEGGEAG 60
Query: 270 LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEI 329
+ YF NR K+S+ VDF+T EGQ+I++ L DVLVENF G L + L Y+ LS++
Sbjct: 61 DAAYFHSCNRGKRSITVDFRTEEGQEIVRRLVADADVLVENFKVGGLAKYGLDYESLSKV 120
Query: 330 NSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLY 389
N +LIYCSVTGFG GPY R GYD + +GG++ +TG PDG P K+G+A D+ TGLY
Sbjct: 121 NPKLIYCSVTGFGQDGPYAHRAGYDFMIQGMGGIMDLTGDPDGAPQKIGVAFADIFTGLY 180
Query: 390 AHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPH 449
V+AAL + +TG+G+ +D LL QV +L N NY G KR G +H N+VP+
Sbjct: 181 GVIGVLAALRRRDETGEGEWVDMALLDAQVGVLANQALNYFVTGKTPKRLGNAHPNIVPY 240
Query: 450 QVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
QVF S+G++ I G+D QY+ +C V+ LA DP++ T A +A + L+
Sbjct: 241 QVFSASDGHLIIAVGNDGQYKRLCGVLGRPELADDPKFATNAARVASRTELV 292
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 60/129 (46%), Gaps = 2/129 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C V+ LA DP++ T A RV +R L + +T + ++ L + P +N
Sbjct: 263 LCGVLGRPELADDPKFATNAARVASRTELVAILTEETAARARDDLLAALEMEGVPAGPIN 322
Query: 61 SISQVFADEHI--QDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
S+ VF D+ I +++K+ + G + V + + + PALGEHT +
Sbjct: 323 SVEDVFEDKQINHREMKVDLPATDVDGGSVTSVRTPIRFKNGSLVLERAAPALGEHTAEI 382
Query: 119 LKDLLNYDE 127
L +L DE
Sbjct: 383 LAELGLTDE 391
>gi|398943536|ref|ZP_10670837.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM41(2012)]
gi|398159130|gb|EJM47446.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM41(2012)]
Length = 406
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 139/294 (47%), Positives = 187/294 (63%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWAGQILADLGAEVIKVERPGNGDDTRAWGPPFLKDAYGENTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ++++DLA + D+L+ENF G L L Y+ L IN
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQKLVRDLAAKSDILIENFKVGGLAAYGLDYESLKAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 NLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPEGDEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ G GQ ID LL QV+ L N NYL G KR G +H N+V
Sbjct: 184 LYSTVAILAALAHRDHDGGGQHIDMALLDVQVACLANQAMNYLTTGNAPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ T L +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAEVAGQPQWADDPRFATNKLRVANRAVLI 297
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 69/139 (49%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ T LRV NR +L I T+ KTT EW+L + P +N
Sbjct: 268 FAEVAGQPQWADDPRFATNKLRVANRAVLIPLIRQATVFKTTAEWVLQLEQAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++Q+FAD ++ L E+ H G + V + S T E R PP LGEHT VL+
Sbjct: 328 DLAQMFADPQVKARGLAIELPHVLAGMVPQVASPIRLSETPVEYRNAPPLLGEHTLEVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L D +A KE +L
Sbjct: 388 RVLGLDAGVVAAFKEAGVL 406
>gi|119175999|ref|XP_001240140.1| hypothetical protein CIMG_09761 [Coccidioides immitis RS]
Length = 399
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 126/263 (47%), Positives = 187/263 (71%), Gaps = 4/263 (1%)
Query: 231 GPFCTMLLADLGAEVIKVEQPVTGDECRKW---GPPFLNNTE-LSTYFTCVNRNKKSVCV 286
GPFCT +LAD GA+VIKVEQP GDE R W G E +S YF CVNRNK+++ +
Sbjct: 15 GPFCTQILADYGADVIKVEQPGKGDETRYWRIHGESEKWKEEGISCYFACVNRNKRAITL 74
Query: 287 DFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGP 346
D K+ +G++I+ DL K+ DV+V+NFVPGK+D+L +GY LS++N +I+ S++G+G+ GP
Sbjct: 75 DLKSEKGREILLDLVKKVDVIVDNFVPGKMDQLGIGYDTLSKVNPSIIHASISGYGAGGP 134
Query: 347 YKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGK 406
Y R GYDIIAA+ GGLLH+TG GPP K G+ DL TGL+ HGA+++AL + +TGK
Sbjct: 135 YSKRAGYDIIAAAEGGLLHVTGEAQGPPTKPGVGLTDLCTGLFMHGAIVSALHARNRTGK 194
Query: 407 GQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSD 466
GQK+D +L TQ+++++N+ + +LN G E KRWGT+H ++VP++ F T + Y+ +G ++
Sbjct: 195 GQKVDGSLFETQLALMVNIASVWLNMGREAKRWGTAHPSIVPYEAFPTKDSYLVMGATNN 254
Query: 467 KQYQDMCKVMNLQHLALDPRYLT 489
+Q+ + + + LA D R+ T
Sbjct: 255 RQFAILAERLGQPDLARDERFRT 277
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 62/115 (53%), Gaps = 2/115 (1%)
Query: 10 LALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADE 69
LA D R+ T R+ENR L K + +TT+EWL +F+ PY +NSI + F
Sbjct: 269 LARDERFRTNDARIENRVELNKILHELFQTRTTDEWLTVFENSGMPYGPINSIEKAFGHA 328
Query: 70 HIQDIKLVKEISHEKY--GDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDL 122
Q +V + + G+ K+ G V +S ++P VR PP LG+HT+ VL +L
Sbjct: 329 QAQARDMVNTLQMDSAADGEFKVTGFPVKFSESKPSVRINPPLLGQHTEEVLAEL 383
>gi|430805525|ref|ZP_19432640.1| L-carnitine dehydratase/bile acid-inducible protein F [Cupriavidus
sp. HMR-1]
gi|429502229|gb|ELA00544.1| L-carnitine dehydratase/bile acid-inducible protein F [Cupriavidus
sp. HMR-1]
Length = 394
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 134/282 (47%), Positives = 182/282 (64%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
L +R+LDL+RI+AGP+CT LADLGAEV+KVE P GD+ R WGPP+L+ + LS
Sbjct: 6 LEGIRVLDLSRILAGPWCTQNLADLGAEVVKVEHPQRGDDTRGWGPPYLDAADGSDARLS 65
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NR K+SVC+D+ PEG + +LA+ DVLVEN+ G L R L Y L IN
Sbjct: 66 AYFISCNRGKQSVCIDYGQPEGVAQLLELARNADVLVENYKVGTLKRYGLDYASLKAINP 125
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIY S+TGFG GP D+PGYD + +GGL+ TG PDG P + G+A +D++TG
Sbjct: 126 RLIYLSITGFGQDGPMADKPGYDYVFQGMGGLMSYTGQPDGSPGAGPLRTGVAVVDVSTG 185
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA AV+AAL + +TG+GQ +D LL V++ N GANYL +G +R G +H N
Sbjct: 186 MYATSAVLAALFQRQQTGEGQHLDIALLDVAVALNANQGANYLVSGKNPQRSGNAHPNCA 245
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P++VF ++GY+ + G+D Q+ C V LA DPRY+T
Sbjct: 246 PYEVFGCADGYLILAIGNDTQFARFCDVAGRPDLAQDPRYVT 287
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 46/91 (50%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C V LA DPRY+T + R+E+ L K + A ++ +W F P+ ++
Sbjct: 270 FCDVAGRPDLAQDPRYVTNSGRIEHLTELRKVLTALFPTRSRADWTAAFDVAGVPWGPIH 329
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIV 91
++ +VFA +Q +L + +H G++ +V
Sbjct: 330 TMEEVFAHPQVQHRQLRQVATHPVMGEVPMV 360
>gi|154284438|ref|XP_001543014.1| hypothetical protein HCAG_00060 [Ajellomyces capsulatus NAm1]
gi|150406655|gb|EDN02196.1| hypothetical protein HCAG_00060 [Ajellomyces capsulatus NAm1]
Length = 451
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 132/303 (43%), Positives = 193/303 (63%), Gaps = 8/303 (2%)
Query: 198 YENFYSLDLALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDEC 257
+ +F + + +LPL+ +R+LD++R++AGP+CT +L DLGAEVIK+E P GD+
Sbjct: 30 WRSFVTAATTTAQSVDNLPLAGIRVLDMSRVLAGPYCTQILGDLGAEVIKIEHPTRGDDT 89
Query: 258 RKWGPPFLNNTE-------LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVEN 310
R WGPPF E S Y+ VNRNKKS+ + F P G +I+ L K+CD+LVEN
Sbjct: 90 RAWGPPFAKYKEDGKEGPGESAYYLSVNRNKKSLGLSFAHPSGIEILHKLVKECDILVEN 149
Query: 311 FVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHP 370
++PG L + + Y + IN +LIY S+TG+G GPY R GYD+I + GL+HITG
Sbjct: 150 YIPGSLKKYKMDYDTVKVINPKLIYASITGYGQTGPYSQRGGYDVIVEAEMGLMHITGSR 209
Query: 371 DGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYL 430
DGPP KVG+A DL TGLY A+MAALL + KTGKGQ ID L QV+ L N+ ++ L
Sbjct: 210 DGPPVKVGVAVTDLTTGLYTSNAIMAALLARAKTGKGQHIDACLSDCQVATLSNLASSAL 269
Query: 431 NAG-IEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+G + RWGT+H ++VP++ ++T + + +G G+DK + +C + +D R+++
Sbjct: 270 ISGEKDSGRWGTAHPSIVPYRAYETKDSDILLGGGNDKLFGVLCDRLGQPEWKVDERFVS 329
Query: 490 GAL 492
L
Sbjct: 330 NNL 332
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 86/139 (61%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + +D R+++ LRV+NRE+L IE KT +KTT+EWL IF+G PY+ +N
Sbjct: 312 LCDRLGQPEWKVDERFVSNNLRVKNREVLDIMIENKTKQKTTQEWLEIFEGSGIPYSAIN 371
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I + H+ +V EI H G IK+V V +S +P +RT PP LG+H+D VL+
Sbjct: 372 DIQGTLNNPHVLARGMVVEIEHPSCGPIKLVNTPVKFSDAKPGIRTSPPMLGQHSDDVLR 431
Query: 121 DLLNYDETTIAKLKEKKIL 139
DL+ E IA+LKE+KI+
Sbjct: 432 DLVGLGEDKIAQLKEQKIV 450
>gi|421485161|ref|ZP_15932723.1| CoA-transferase [Achromobacter piechaudii HLE]
gi|400196591|gb|EJO29565.1| CoA-transferase [Achromobacter piechaudii HLE]
Length = 410
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 140/294 (47%), Positives = 183/294 (62%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL-----S 271
LS++R+LDL+R++AGP+ + LLADLGAEVIK+E+P GD+ R WGPP++ + + S
Sbjct: 4 LSHLRVLDLSRVLAGPWASQLLADLGAEVIKIERPGVGDDTRGWGPPWIRDPQWGEVAQS 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NRNKKSV VD T +GQ+++ LA QCDVL+ENF G L L Y L +
Sbjct: 64 AYFAGANRNKKSVAVDIATDDGQRLVAALAAQCDVLIENFKVGGLQAYGLDYATLKARHP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
L+YCS+TGFG GPY RPGYD + +GGL+ ITG DG P KVG+A D+ TG
Sbjct: 124 GLVYCSITGFGQTGPYAARPGYDFLIQGMGGLMSITGRGDGEPGAGPLKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA + AAL H+ +TG GQ ID LL QV+ L N NYL +G R G +H N+V
Sbjct: 184 LYATAGIQAALAHRDRTGAGQHIDVALLDVQVAALANQAMNYLASGNAPDRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T +G+V + G+D Q++ C + LA D RY T LA LI
Sbjct: 244 PYQDFATRDGHVIVTVGNDGQFRRFCGAIGRPELADDARYATNTARLASRETLI 297
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 69/141 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C + LA D RY T R+ +RE L +I+A+ + ++ WL + ++ P +N
Sbjct: 268 FCGAIGRPELADDARYATNTARLASRETLIPQIQAQMAQHSSAHWLRTLEALAVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ VFAD + + + + G +VG + S T R+ PP LG HT+ VL+
Sbjct: 328 GMADVFADPQVLQRGMRVPMPDAQAGCTDLVGNPLHLSATPVAYRSAPPVLGAHTETVLR 387
Query: 121 DLLNYDETTIAKLKEKKILGL 141
D+L + + +L+ + +
Sbjct: 388 DMLGLEPHRLDELRRNGAIAV 408
>gi|218889186|ref|YP_002438050.1| putative acyl-CoA transferase [Pseudomonas aeruginosa LESB58]
gi|218769409|emb|CAW25169.1| putative acyl-CoA transferase [Pseudomonas aeruginosa LESB58]
Length = 407
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 133/282 (47%), Positives = 187/282 (66%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIK+E+P +GD+ R WGPPFL N+T +
Sbjct: 5 LSHIRVLDLSRVLAGPWAGQILADLGAEVIKIERPGSGDDTRAWGPPFLKDAEGNDTSEA 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNKKSV VDF PEGQ+I+++LA + D+L+ENF G L L Y+ L ++N
Sbjct: 65 AYYLSANRNKKSVTVDFTQPEGQRIVRELAAKADILLENFKVGGLKAYGLDYESLKQVNP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG D P KVG+A D+ TG
Sbjct: 125 KLIYCSITGFGQSGPYAKRAGYDFMIQGLGGLMSLTGRADSEEGAGPVKVGVALTDILTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ AV+AAL H+ +G GQ ID LL QV+ L N NYL G+ +R G +H N+V
Sbjct: 185 LYSSTAVLAALAHRDVSGIGQHIDMALLDVQVACLANQTLNYLTTGVPPRRLGNAHPNIV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F T++G + + G+D Q++ ++ + A DPR+ T
Sbjct: 245 PYQDFPTADGDMILTVGNDSQFRKFAELADHPEWADDPRFAT 286
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 70/129 (54%)
Query: 11 ALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEH 70
A DPR+ T RV NRE+L I T+ TT EW+L + P +N ++QVFAD
Sbjct: 279 ADDPRFATNKARVANREVLIPLIRQATVLHTTAEWILSLERAGVPCGPINDLAQVFADPQ 338
Query: 71 IQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETTI 130
+Q L E+ H G + V + S T E R PPP LG+HTD VL+ LL D +
Sbjct: 339 VQARGLRVELPHPLAGTVPQVASPIRLSETPVEYRNPPPTLGQHTDEVLETLLGLDAAAL 398
Query: 131 AKLKEKKIL 139
+L++ K++
Sbjct: 399 ERLRDGKVI 407
>gi|241766999|ref|ZP_04764790.1| L-carnitine dehydratase/bile acid-inducible protein F [Acidovorax
delafieldii 2AN]
gi|241362497|gb|EER58410.1| L-carnitine dehydratase/bile acid-inducible protein F [Acidovorax
delafieldii 2AN]
Length = 441
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 136/284 (47%), Positives = 188/284 (66%), Gaps = 10/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
L ++R+LDL+R++AGP+CT LAD+GA+VIK+E+P GD+ R WGPPF + TE +
Sbjct: 31 LGHLRVLDLSRVLAGPWCTQNLADMGADVIKIEKPGEGDDTRHWGPPFFADAAGTPTEHA 90
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NRNK+SV VD TPEGQ++I++LA+Q DVLVENF G L R L Y+ L +N
Sbjct: 91 CYFAACNRNKRSVTVDMATPEGQELIRELARQSDVLVENFKTGGLARYGLDYESLRNLNP 150
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+LIYCSVTGFG GPY R GYD++ ++ GL+ ITG P G P +VG+A IDL TG
Sbjct: 151 RLIYCSVTGFGQTGPYAQRAGYDLLVQAMSGLMSITGRADSEPGGGPLRVGVAVIDLFTG 210
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA A+++AL ++ TG+GQ ID LL +++L N G YLN+G R G +H +VV
Sbjct: 211 MYATSAILSALEARHHTGRGQHIDMALLDVAMAVLANQGTGYLNSGSVPGRQGNTHPSVV 270
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P+Q F T++G + + G+D Q+ C + A D R+ T A
Sbjct: 271 PYQDFPTADGNMLLAIGNDGQFARFCAAAGVD-WAKDTRFATNA 313
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 13/140 (9%)
Query: 11 ALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEH 70
A D R+ T A RV +RE+L + A T + T +W+ + + + P +N I Q F D
Sbjct: 304 AKDTRFATNAGRVTHREILVPLMAAITRTRPTADWINLLEDKAVPCGPINHIGQAFDDPQ 363
Query: 71 IQDIKLVKEISHEKYGDI---------KIVGPAVAYSL--TQPEVRTPPPALGEHTDYVL 119
+Q L + E+Y ++V A L T P +R PPALG+HT+ VL
Sbjct: 364 VQHRGL--RVEQERYPGAQPPAGEHINRVVTTASPMRLSDTPPTLRHAPPALGQHTEQVL 421
Query: 120 KDLLNYDETTIAKLKEKKIL 139
++ L D +A L+ K ++
Sbjct: 422 REHLGVDAQRMAALRAKGVV 441
>gi|258563606|ref|XP_002582548.1| hypothetical protein UREG_07321 [Uncinocarpus reesii 1704]
gi|237908055|gb|EEP82456.1| hypothetical protein UREG_07321 [Uncinocarpus reesii 1704]
Length = 444
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 131/287 (45%), Positives = 189/287 (65%), Gaps = 8/287 (2%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-------N 266
+LPL+ +R++D+TR++AGP+CT +L DLGAEVIK+E PV GD+ R WGPP+ +
Sbjct: 40 TLPLAGIRVVDMTRVLAGPYCTQILGDLGAEVIKIEHPVRGDDTRAWGPPYAKYKKGTKD 99
Query: 267 NTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHL 326
S Y+ VNRNKKS+ + F P G I+ L K DVLVEN++PG L + L Y+ L
Sbjct: 100 GPGESAYYLAVNRNKKSLALSFAHPRGIDILHKLVKDADVLVENYIPGSLKKYKLDYETL 159
Query: 327 SEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLAT 386
+ +N +LIY S+TG+G GPY R GYD++ + GL+HITG DGPP KVG+A DL T
Sbjct: 160 NSLNPRLIYASITGYGQTGPYSQRAGYDVMVEAEMGLMHITGARDGPPVKVGVAVTDLTT 219
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAG-IEGKRWGTSHAN 445
GLY A+MAALL + +TG+GQ ID L QV+ L N+ ++ L +G + RWGT+H +
Sbjct: 220 GLYTSNAIMAALLARARTGQGQHIDSALSDCQVATLSNLASSALISGEKDSGRWGTAHPS 279
Query: 446 VVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
+VP++ +KT +G + +G G+D + +C+ + DPR++T L
Sbjct: 280 IVPYRGYKTKDGDILLGGGNDNLFGILCQRLGHPEWKTDPRFVTNNL 326
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 80/139 (57%), Gaps = 1/139 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + DPR++T LRV+NR ++ IE +KTT+EWL I +G PY+ VN
Sbjct: 306 LCQRLGHPEWKTDPRFVTNNLRVKNRPVIDGLIEETVKQKTTQEWLEILEGSGMPYSAVN 365
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I H++ +V+EI H G I++V V YS P +R PPP LG+HT+ VL+
Sbjct: 366 DIQGTLNHTHVRARGMVQEIEHPVCGPIELVNTPVKYSHATPGIRLPPPTLGQHTNEVLQ 425
Query: 121 DLLNYDETTIAKLKEKKIL 139
D L + I +L+++ I+
Sbjct: 426 D-LGFGSENIDRLRQEGIV 443
>gi|424067860|ref|ZP_17805316.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
syringae pv. avellanae str. ISPaVe013]
gi|407999581|gb|EKG39962.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
syringae pv. avellanae str. ISPaVe013]
Length = 412
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 141/302 (46%), Positives = 190/302 (62%), Gaps = 17/302 (5%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL--NNTELST-- 272
L+ R+LDL+R++AGP+C LADLGAEVIKVE+P GD+ R WGPP++ + EL+T
Sbjct: 4 LTGYRVLDLSRVLAGPWCGQTLADLGAEVIKVERPGVGDDTRGWGPPWMKGQSEELTTEA 63
Query: 273 -YFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NR K SV ++ +P+GQ++++ LA CDVL+EN+ G L + L Y LS++N
Sbjct: 64 SYYQSTNRGKLSVALNLASPQGQELVRALATDCDVLIENYKAGSLAKYGLDYASLSQLNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCSVTGFG GP PGYD I IGGL+ ITG P G P KVG+A DL TG
Sbjct: 124 RLVYCSVTGFGQTGPRAAEPGYDFIVQGIGGLMSITGERDDLPGGGPQKVGVAFSDLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL + KTG GQ ID LL QV+ L N NYL +G R+G +HAN+V
Sbjct: 184 LYSTVAIQAALLSREKTGMGQHIDMALLDVQVATLCNQSQNYLASGKPPGRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTG--------ALILAMTSH 499
P+QVF+ S+ I G+D Q+ +C + L HL DPR+ A+I ++ H
Sbjct: 244 PYQVFRASDQDFIIACGNDSQFVALCDAIGLGHLPADPRFTRNADRVANREAIIEILSGH 303
Query: 500 LI 501
I
Sbjct: 304 FI 305
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 72/145 (49%), Gaps = 3/145 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L HL DPR+ A RV NRE + + + +E +EW+ P +N
Sbjct: 268 LCDAIGLGHLPADPRFTRNADRVANREAIIEILSGHFIEGRAQEWIDRVHPRGVPIGAIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI+Q + ++ ++ +I H D VG + S T E P P LGEHTD VLK
Sbjct: 328 SIAQALDEPQVKARNMLVKIPHPLKADFVTVGSPIKMSGTPVEYLRPAPMLGEHTDEVLK 387
Query: 121 DLLNYDETTIAKLKEKKILGLIERL 145
L D+ +A+LK G+IE+L
Sbjct: 388 RQLGLDDERLAQLKSS---GVIEQL 409
>gi|399003318|ref|ZP_10705984.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM18]
gi|398123161|gb|EJM12732.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM18]
Length = 406
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 138/294 (46%), Positives = 188/294 (63%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGA+VIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWAGQILADLGADVIKVERPGNGDDTRAWGPPFLKDAYGENTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQQ++++LA + D+L+ENF G L L Y+ L N
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQQLVRELAAKSDILIENFKVGGLAAYGLDYESLKVANP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 KLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPEGDEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ G GQ ID LL QV+ L N NYL GI KR G +H N+V
Sbjct: 184 LYSTVAILAALAHRDHGGGGQHIDMALLDVQVACLANQAMNYLTTGIAPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ T L +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAEVAGQPQWADDPRFATNKLRVANRAVLI 297
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 72/139 (51%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ T LRV NR +L I T+ KTT EW++ + P +N
Sbjct: 268 FAEVAGQPQWADDPRFATNKLRVANRAVLIPLIRQATVFKTTAEWVMQLEQAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD +Q +L E+ H G + V + S T E R+ PP LGEHT VL+
Sbjct: 328 DLAQVFADPQVQARRLAIELPHALAGIVPQVASPIRLSETPVEYRSAPPLLGEHTLEVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L D +A LKE +L
Sbjct: 388 RVLGLDAGAVAALKEAGVL 406
>gi|452751323|ref|ZP_21951069.1| L-carnitine dehydratase/bile acid-inducible protein F [alpha
proteobacterium JLT2015]
gi|451961473|gb|EMD83883.1| L-carnitine dehydratase/bile acid-inducible protein F [alpha
proteobacterium JLT2015]
Length = 409
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 132/286 (46%), Positives = 187/286 (65%), Gaps = 4/286 (1%)
Query: 209 SSENPS-LPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN 267
S+E P PL+ R+LDL+R++AGP+CTM+L DLGAEV+KVE P GD+ R WGPPF
Sbjct: 4 SAETPRPAPLAGRRVLDLSRVLAGPWCTMILGDLGAEVVKVENPRGGDDTRGWGPPFAAG 63
Query: 268 TELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLS 327
+ Y+ C NRNKKS+ +DF PEGQ I++ LA D+LVEN+ G L + L Y L+
Sbjct: 64 E--AAYYLCANRNKKSLALDFSEPEGQAILRSLAADADILVENYKAGGLGKYGLDYASLA 121
Query: 328 EINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATG 387
++N +L+YCSVTG+G P RPGYD + + GGL+ +TG DG P KVG+A DL TG
Sbjct: 122 KVNPRLVYCSVTGYGHASPLAARPGYDYVIQAEGGLMSVTGPADGAPHKVGVAVADLFTG 181
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+ A A +A L+ + G+GQ ID L +Q++ML NVG+ YL +G E R+G HA V+
Sbjct: 182 MAAAQACLAGLIAADRDGRGQHIDMALYDSQLAMLANVGSAYLVSGKEPARYGNGHATVL 241
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKV-MNLQHLALDPRYLTGAL 492
P+ +F ++G + + G+D+Q++ +V M LA D R+ T A+
Sbjct: 242 PYDLFDAADGQIVVAVGNDRQFRVFAEVLMKRPDLAADARFATNAV 287
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 1/137 (0%)
Query: 4 VMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSIS 63
+M LA D R+ T A+RVENR+ L E+ + + + W+ + P +V S+
Sbjct: 270 LMKRPDLAADARFATNAVRVENRDALLSELRREIAGRPADYWIAGMRENGIPCGEVRSVG 329
Query: 64 QVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLL 123
+ + +V+ + H G+I +VG + + T PP LG+H+D +L
Sbjct: 330 EALTAPETEARDMVRRVPHPAAGEISLVGSPLKFGATPVVEPRAPPLLGQHSDEILAG-A 388
Query: 124 NYDETTIAKLKEKKILG 140
Y++ IA L+ I+G
Sbjct: 389 GYNDNAIAALRADGIVG 405
>gi|398392555|ref|XP_003849737.1| hypothetical protein MYCGRDRAFT_47917 [Zymoseptoria tritici IPO323]
gi|339469614|gb|EGP84713.1| hypothetical protein MYCGRDRAFT_47917 [Zymoseptoria tritici IPO323]
Length = 455
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 128/280 (45%), Positives = 189/280 (67%), Gaps = 7/280 (2%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKW-----GPPFLNNT--E 269
L+ V+ILDL+R++A P+CT +LAD GA+VIK+E P GD+ R W G +
Sbjct: 47 LAGVKILDLSRVLAAPYCTQILADYGADVIKIEDPERGDDTRYWTVTGEGKGMWKDGIGP 106
Query: 270 LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEI 329
+S YF+ VNRNKKSV ++ K G++I ++AK+ DV+VEN PG +DRL +GY+ L ++
Sbjct: 107 MSNYFSAVNRNKKSVALNLKHKRGREIFLEMAKEADVVVENLRPGNMDRLKIGYEDLRKV 166
Query: 330 NSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLY 389
N ++I S +G+G+ GP + R GYD+IA + GLLH+TG G P + G+ D++TGLY
Sbjct: 167 NKRIILASTSGYGAGGPMEKRAGYDMIAGAEAGLLHLTGERGGGPVRPGLGLTDMSTGLY 226
Query: 390 AHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPH 449
HGA+MAAL + +TG+GQKID +L TQV++L NVG ++LN G+E +RWG H +VVP+
Sbjct: 227 MHGAIMAALYARERTGEGQKIDGSLFETQVALLTNVGLSWLNMGVEAERWGAQHPSVVPY 286
Query: 450 QVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
FKT + Y G +DKQ+ ++ K++ LA D R+ +
Sbjct: 287 DAFKTKDLYFVCGATNDKQFANLVKILGRPELAQDERFTS 326
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+ K++ LA D R+ + RV NR L ++ K+T EW F+G PYA +N
Sbjct: 309 LVKILGRPELAQDERFTSNGQRVTNRNDLYPILQELFAAKSTTEWEQEFEGSGMPYAPIN 368
Query: 61 SISQVFA--DEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
++ +VF H +D+ + G IK++GPA+ +S T+ +RT PP GEHT+ V
Sbjct: 369 TMQRVFEHPQTHARDMIAEVPLDSAASGKIKLIGPAIKFSHTKATIRTQPPLHGEHTNEV 428
Query: 119 L 119
L
Sbjct: 429 L 429
>gi|15595643|ref|NP_249137.1| hypothetical protein PA0446 [Pseudomonas aeruginosa PAO1]
gi|107099430|ref|ZP_01363348.1| hypothetical protein PaerPA_01000442 [Pseudomonas aeruginosa PACS2]
gi|116054175|ref|YP_788619.1| hypothetical protein PA14_05820 [Pseudomonas aeruginosa UCBPP-PA14]
gi|254237323|ref|ZP_04930646.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|296386943|ref|ZP_06876442.1| hypothetical protein PaerPAb_02367 [Pseudomonas aeruginosa PAb1]
gi|313111929|ref|ZP_07797718.1| putative acyl-CoA transferase [Pseudomonas aeruginosa 39016]
gi|355646775|ref|ZP_09054610.1| hypothetical protein HMPREF1030_03696 [Pseudomonas sp. 2_1_26]
gi|386056513|ref|YP_005973035.1| putative acyl-CoA transferase [Pseudomonas aeruginosa M18]
gi|386068644|ref|YP_005983948.1| hypothetical protein NCGM2_5752 [Pseudomonas aeruginosa NCGM2.S1]
gi|392981856|ref|YP_006480443.1| hypothetical protein PADK2_02240 [Pseudomonas aeruginosa DK2]
gi|416874968|ref|ZP_11918461.1| hypothetical protein PA15_10298 [Pseudomonas aeruginosa 152504]
gi|418584986|ref|ZP_13149043.1| hypothetical protein O1O_09950 [Pseudomonas aeruginosa MPAO1/P1]
gi|418591708|ref|ZP_13155599.1| hypothetical protein O1Q_13843 [Pseudomonas aeruginosa MPAO1/P2]
gi|419755926|ref|ZP_14282278.1| hypothetical protein CF510_23244 [Pseudomonas aeruginosa
PADK2_CF510]
gi|420137028|ref|ZP_14645030.1| hypothetical protein PACIG1_0527 [Pseudomonas aeruginosa CIG1]
gi|421157469|ref|ZP_15616837.1| hypothetical protein PABE173_0460 [Pseudomonas aeruginosa ATCC
25324]
gi|421165312|ref|ZP_15623648.1| hypothetical protein PABE177_0469 [Pseudomonas aeruginosa ATCC
700888]
gi|421172210|ref|ZP_15629986.1| hypothetical protein PACI27_0462 [Pseudomonas aeruginosa CI27]
gi|421178355|ref|ZP_15635970.1| hypothetical protein PAE2_0416 [Pseudomonas aeruginosa E2]
gi|421515062|ref|ZP_15961748.1| hypothetical protein A161_02280 [Pseudomonas aeruginosa PAO579]
gi|424943135|ref|ZP_18358898.1| putative acyl-CoA transferase [Pseudomonas aeruginosa NCMG1179]
gi|9946305|gb|AAG03835.1|AE004482_2 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|115589396|gb|ABJ15411.1| putative acyl-CoA transferase [Pseudomonas aeruginosa UCBPP-PA14]
gi|126169254|gb|EAZ54765.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|310884220|gb|EFQ42814.1| putative acyl-CoA transferase [Pseudomonas aeruginosa 39016]
gi|334842521|gb|EGM21127.1| hypothetical protein PA15_10298 [Pseudomonas aeruginosa 152504]
gi|346059581|dbj|GAA19464.1| putative acyl-CoA transferase [Pseudomonas aeruginosa NCMG1179]
gi|347302819|gb|AEO72933.1| putative acyl-CoA transferase [Pseudomonas aeruginosa M18]
gi|348037203|dbj|BAK92563.1| hypothetical protein NCGM2_5752 [Pseudomonas aeruginosa NCGM2.S1]
gi|354828314|gb|EHF12437.1| hypothetical protein HMPREF1030_03696 [Pseudomonas sp. 2_1_26]
gi|375045318|gb|EHS37904.1| hypothetical protein O1O_09950 [Pseudomonas aeruginosa MPAO1/P1]
gi|375049434|gb|EHS41930.1| hypothetical protein O1Q_13843 [Pseudomonas aeruginosa MPAO1/P2]
gi|384397588|gb|EIE43999.1| hypothetical protein CF510_23244 [Pseudomonas aeruginosa
PADK2_CF510]
gi|392317361|gb|AFM62741.1| hypothetical protein PADK2_02240 [Pseudomonas aeruginosa DK2]
gi|403250204|gb|EJY63658.1| hypothetical protein PACIG1_0527 [Pseudomonas aeruginosa CIG1]
gi|404348790|gb|EJZ75127.1| hypothetical protein A161_02280 [Pseudomonas aeruginosa PAO579]
gi|404538071|gb|EKA47628.1| hypothetical protein PACI27_0462 [Pseudomonas aeruginosa CI27]
gi|404542285|gb|EKA51611.1| hypothetical protein PABE177_0469 [Pseudomonas aeruginosa ATCC
700888]
gi|404548685|gb|EKA57632.1| hypothetical protein PAE2_0416 [Pseudomonas aeruginosa E2]
gi|404550573|gb|EKA59311.1| hypothetical protein PABE173_0460 [Pseudomonas aeruginosa ATCC
25324]
Length = 407
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 133/282 (47%), Positives = 187/282 (66%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIK+E+P +GD+ R WGPPFL N+T +
Sbjct: 5 LSHIRVLDLSRVLAGPWAGQILADLGAEVIKIERPGSGDDTRAWGPPFLKDAEGNDTSEA 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNKKSV VDF PEGQ+I+++LA + D+L+ENF G L L Y+ L ++N
Sbjct: 65 AYYLSANRNKKSVTVDFTQPEGQRIVRELAAKADILLENFKVGGLKAYGLDYESLKQVNP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG D P KVG+A D+ TG
Sbjct: 125 KLIYCSITGFGQSGPYAKRAGYDFMIQGLGGLMSLTGRADNEEGAGPVKVGVALTDILTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ AV+AAL H+ +G GQ ID LL QV+ L N NYL G+ +R G +H N+V
Sbjct: 185 LYSSTAVLAALAHRDVSGIGQHIDMALLDVQVACLANQTLNYLTTGVPPRRLGNAHPNIV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F T++G + + G+D Q++ ++ + A DPR+ T
Sbjct: 245 PYQDFPTADGDMILTVGNDSQFRKFAELADHPEWADDPRFAT 286
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 70/129 (54%)
Query: 11 ALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEH 70
A DPR+ T RV NRE+L I T+ TT EW+L + P +N ++QVFAD
Sbjct: 279 ADDPRFATNKARVANREVLIPLIRQATVLHTTAEWILSLERAGVPCGPINDLAQVFADPQ 338
Query: 71 IQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETTI 130
+Q L E+ H G + V + S T E R PPP LG+HTD VL+ LL D +
Sbjct: 339 VQARGLRVELPHPLAGTVPQVASPIRLSETPVEYRNPPPTLGQHTDEVLETLLGLDAAAL 398
Query: 131 AKLKEKKIL 139
+L++ K++
Sbjct: 399 ERLRDGKVI 407
>gi|416856293|ref|ZP_11911937.1| hypothetical protein PA13_08790 [Pseudomonas aeruginosa 138244]
gi|451988169|ref|ZP_21936308.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
aeruginosa 18A]
gi|334842168|gb|EGM20781.1| hypothetical protein PA13_08790 [Pseudomonas aeruginosa 138244]
gi|451754145|emb|CCQ88831.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
aeruginosa 18A]
gi|453045824|gb|EME93542.1| hypothetical protein H123_13490 [Pseudomonas aeruginosa PA21_ST175]
Length = 407
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 133/282 (47%), Positives = 187/282 (66%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIK+E+P +GD+ R WGPPFL N+T +
Sbjct: 5 LSHIRVLDLSRVLAGPWAGQILADLGAEVIKIERPGSGDDTRAWGPPFLKDAEGNDTSEA 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNKKSV VDF PEGQ+I+++LA + D+L+ENF G L L Y+ L ++N
Sbjct: 65 AYYLSANRNKKSVTVDFTQPEGQRIVRELAAKADILLENFKVGGLKAYGLDYESLKQVNP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG D P KVG+A D+ TG
Sbjct: 125 KLIYCSITGFGQSGPYAKRAGYDFMIQGLGGLMSLTGRADNEEGAGPVKVGVALTDILTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ AV+AAL H+ +G GQ ID LL QV+ L N NYL G+ +R G +H N+V
Sbjct: 185 LYSSTAVLAALAHRDVSGIGQHIDMALLDVQVACLANQTLNYLTTGVPPRRLGNAHPNIV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F T++G + + G+D Q++ ++ + A DPR+ T
Sbjct: 245 PYQDFPTADGDMILTVGNDSQFRKFAELADHPEWADDPRFAT 286
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 71/129 (55%)
Query: 11 ALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEH 70
A DPR+ T RV NRE+L I T+ TT EW+L + P +N ++QVFAD
Sbjct: 279 ADDPRFATNKARVANREVLIPLIRQATVLHTTAEWILSLERAGVPCGPINDLAQVFADPQ 338
Query: 71 IQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETTI 130
+Q L E+ H G + V + S T E R PPP LG+HTD VL+ LL D T +
Sbjct: 339 VQARGLRVELPHPLAGTVPQVASPIRLSETPVEYRNPPPTLGQHTDEVLETLLGLDATAL 398
Query: 131 AKLKEKKIL 139
+L++ K++
Sbjct: 399 ERLRDGKVI 407
>gi|184157704|ref|YP_001846043.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii ACICU]
gi|332876389|ref|ZP_08444158.1| III protein, CoA-transferase family [Acinetobacter baumannii
6014059]
gi|384131791|ref|YP_005514403.1| L-carnitine dehydrogenase [Acinetobacter baumannii 1656-2]
gi|384142791|ref|YP_005525501.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii MDR-ZJ06]
gi|385237102|ref|YP_005798441.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii TCDC-AB0715]
gi|387124337|ref|YP_006290219.1| putative acyl-CoA transferase/carnitine dehydratase [Acinetobacter
baumannii MDR-TJ]
gi|407932422|ref|YP_006848065.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii TYTH-1]
gi|416147985|ref|ZP_11602110.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii AB210]
gi|417568106|ref|ZP_12218969.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC189]
gi|417579082|ref|ZP_12229915.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-17]
gi|417869623|ref|ZP_12514607.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii ABNIH1]
gi|417873082|ref|ZP_12517962.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii ABNIH2]
gi|417878786|ref|ZP_12523384.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii ABNIH3]
gi|417881548|ref|ZP_12525865.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii ABNIH4]
gi|421204747|ref|ZP_15661864.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii AC12]
gi|421534862|ref|ZP_15981130.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii AC30]
gi|421627711|ref|ZP_16068516.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC180]
gi|421687169|ref|ZP_16126898.1| CoA-transferase family III protein [Acinetobacter baumannii IS-143]
gi|421703230|ref|ZP_16142696.1| L-carnitine dehydrogenase [Acinetobacter baumannii ZWS1122]
gi|421706953|ref|ZP_16146355.1| L-carnitine dehydrogenase [Acinetobacter baumannii ZWS1219]
gi|421791747|ref|ZP_16227918.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-2]
gi|424052770|ref|ZP_17790302.1| hypothetical protein W9G_01459 [Acinetobacter baumannii Ab11111]
gi|424064253|ref|ZP_17801738.1| hypothetical protein W9M_01536 [Acinetobacter baumannii Ab44444]
gi|425753308|ref|ZP_18871197.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-113]
gi|445471760|ref|ZP_21452297.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC338]
gi|445485015|ref|ZP_21456892.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-78]
gi|183209298|gb|ACC56696.1| predicted acyl-CoA transferases/carnitine dehydratase
[Acinetobacter baumannii ACICU]
gi|322508011|gb|ADX03465.1| L-carnitine dehydrogenase [Acinetobacter baumannii 1656-2]
gi|323517599|gb|ADX91980.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii TCDC-AB0715]
gi|332735399|gb|EGJ66457.1| III protein, CoA-transferase family [Acinetobacter baumannii
6014059]
gi|333365253|gb|EGK47267.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii AB210]
gi|342230061|gb|EGT94904.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii ABNIH1]
gi|342231325|gb|EGT96135.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii ABNIH3]
gi|342232355|gb|EGT97134.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii ABNIH2]
gi|342238844|gb|EGU03268.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii ABNIH4]
gi|347593284|gb|AEP06005.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii MDR-ZJ06]
gi|385878829|gb|AFI95924.1| putative acyl-CoA transferase/carnitine dehydratase [Acinetobacter
baumannii MDR-TJ]
gi|395554401|gb|EJG20403.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC189]
gi|395568220|gb|EJG28894.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-17]
gi|398325735|gb|EJN41896.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii AC12]
gi|404566016|gb|EKA71178.1| CoA-transferase family III protein [Acinetobacter baumannii IS-143]
gi|404671115|gb|EKB38976.1| hypothetical protein W9G_01459 [Acinetobacter baumannii Ab11111]
gi|404673347|gb|EKB41139.1| hypothetical protein W9M_01536 [Acinetobacter baumannii Ab44444]
gi|407192723|gb|EKE63899.1| L-carnitine dehydrogenase [Acinetobacter baumannii ZWS1122]
gi|407193087|gb|EKE64258.1| L-carnitine dehydrogenase [Acinetobacter baumannii ZWS1219]
gi|407901003|gb|AFU37834.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii TYTH-1]
gi|408711097|gb|EKL56316.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC180]
gi|409987199|gb|EKO43384.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii AC30]
gi|410402438|gb|EKP54556.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-2]
gi|425498278|gb|EKU64362.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-113]
gi|444767239|gb|ELW91491.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-78]
gi|444771020|gb|ELW95156.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC338]
Length = 405
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 133/284 (46%), Positives = 189/284 (66%), Gaps = 9/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ +T+ +
Sbjct: 4 LNGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPKVGDDTRSWGPPWMKDDSGQDTQEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK SV +D P+GQ++IK L + DV++EN+ G L + L Y+ LS IN
Sbjct: 64 AYYQSTNRNKLSVAIDIANPDGQELIKALIQDTDVVIENYKAGSLKKYGLDYESLSAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TGFG GP + PGYD I +GGL+ +TG P G P KVG+A DLATG
Sbjct: 124 KLVYCSITGFGQTGPRAEEPGYDFIIQGMGGLMSVTGERDDLPGGGPQKVGVAFSDLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL+++ TG GQ ID LL Q++ + N G NYL++G KR+G +HAN+V
Sbjct: 184 LYSTIAIQAALLNRHVTGLGQYIDMALLDVQIATMANQGMNYLSSGNIPKRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P+QVFK S+ I G+D Q+ +C+ + L L D R+ A
Sbjct: 244 PYQVFKASDRDFIIACGNDTQFIQLCRSIGLPDLPNDARFARNA 287
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 78/140 (55%), Gaps = 2/140 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + L L D R+ A R+++R+ + ++ + KT +EW+ P +N
Sbjct: 268 LCRSIGLPDLPNDARFARNANRIKHRDEIIGILQTHFLTKTADEWVDAIYAAKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q F + + +++ E++H + +K++G + S T E +T PP LGEHT VL
Sbjct: 328 NLEQAFQEPQVIAREMLVEMNHPQREKLKVIGSPIKLSRTPVEYKTAPPLLGEHTQAVLG 387
Query: 121 DLLNYDETTIAKLKEKKILG 140
+++ ++ +A+LKEK ++G
Sbjct: 388 RIVSSEK--LAELKEKGVIG 405
>gi|346992164|ref|ZP_08860236.1| CAIB/BAIF family protein [Ruegeria sp. TW15]
Length = 394
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 131/280 (46%), Positives = 185/280 (66%), Gaps = 6/280 (2%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTG-DECRKWGPPFL-----NNTE 269
PL V++LDL+RI+AGP CT LL DLGA VIK+E P TG D+ R+WGPP++ N ++
Sbjct: 7 PLKGVKVLDLSRILAGPTCTQLLGDLGATVIKIENPATGGDDTRQWGPPYIEYADGNRSD 66
Query: 270 LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEI 329
LS YF NRNKKSV +D + EGQ I+ LA D+L+ENF PG L + L Y LS+
Sbjct: 67 LSAYFMSSNRNKKSVALDIASAEGQAEIRRLASHADILIENFKPGGLAKYGLDYATLSKE 126
Query: 330 NSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLY 389
L+YCS++G+G GP +PGYD++A GG++ +TG P+G P KVG+ D+ G+Y
Sbjct: 127 FPSLVYCSISGYGQTGPNASKPGYDLMAQGYGGVMSLTGDPEGAPMKVGVGIADVMCGMY 186
Query: 390 AHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPH 449
A ++AAL H+ TG+GQ++D L+ +QV+ LIN G NYL +G +R G H N+VP+
Sbjct: 187 ACVGILAALRHRDLTGEGQQVDLALVDSQVAWLINEGVNYLTSGNVPQRRGNGHPNIVPY 246
Query: 450 QVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
V+ TS+G+V + G+D Q++ C + LA DPR+ T
Sbjct: 247 DVYATSDGHVILAVGNDSQFKRFCSFIQHPELADDPRFAT 286
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 1/119 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C + LA DPR+ T R+ENR+ L + T + + + P V
Sbjct: 269 FCSFIQHPELADDPRFATNPARLENRDALNAILRPAVQALDTSRVIAGLEELKVPVGPVQ 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVL 119
++ QVF + + + ++ G+++++G + S T R+ PP G T VL
Sbjct: 329 TLDQVFTSDQVA-ARRMQVTMQAAPGEVQLIGNPLNLSRTPVTYRSAPPVCGADTQAVL 386
>gi|359408052|ref|ZP_09200524.1| putative acyl-CoA transferase/carnitine dehydratase [SAR116 cluster
alpha proteobacterium HIMB100]
gi|356676809|gb|EHI49158.1| putative acyl-CoA transferase/carnitine dehydratase [SAR116 cluster
alpha proteobacterium HIMB100]
Length = 398
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 132/281 (46%), Positives = 187/281 (66%), Gaps = 8/281 (2%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE----LST 272
L++VR+LDL+RI+AGP T +L DLGA+V+K+E P GD+ R+WGPPF++ ++ +
Sbjct: 11 LADVRVLDLSRILAGPSATQILGDLGADVVKIEHPAGGDDTRRWGPPFIDTSDGLRAEAA 70
Query: 273 YFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQ 332
YF C NRNK+SV +DF PE + +K + + DVLVENF G L++ L + L +IN +
Sbjct: 71 YFACCNRNKRSVALDFSKPEDIETLKKMVRVADVLVENFKFGGLEKYGLDFASLQKINPK 130
Query: 333 LIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATGL 388
LIYCS+TGFG GPY RPGYD + +GGL+ ITG PDG P KVG+A DL TGL
Sbjct: 131 LIYCSITGFGHSGPYAHRPGYDFLIQGMGGLMSITGQPDGTSGAEPMKVGVAICDLFTGL 190
Query: 389 YAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVP 448
A A++AAL ++ +TG GQ IDC LL +Q +ML N +N+LN + +R G H ++VP
Sbjct: 191 NAVSAILAALHYRTRTGVGQHIDCALLDSQAAMLANQSSNWLNCQVVPERMGNHHPSIVP 250
Query: 449 HQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
++VF+ S+GY+ I G+D Q+ + + LA D R+ T
Sbjct: 251 YRVFEVSDGYIIINCGNDGQFTRLVTALGRPELADDDRFKT 291
>gi|73539066|ref|YP_299433.1| L-carnitine dehydratase/bile acid-inducible protein F [Ralstonia
eutropha JMP134]
gi|72122403|gb|AAZ64589.1| L-carnitine dehydratase/bile acid-inducible protein F [Ralstonia
eutropha JMP134]
Length = 385
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 133/282 (47%), Positives = 182/282 (64%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
L VR+LDL+RI+AGP+CT LADLGAEV KVE P GD+ R WGPP+++ + LS
Sbjct: 6 LEGVRVLDLSRILAGPWCTQNLADLGAEVTKVEHPERGDDTRGWGPPYMSAADGSDARLS 65
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NR K+SV +D+ TPEG +++LA++ DVLVEN+ G L R L Y L IN
Sbjct: 66 GYFISCNRGKRSVAIDYGTPEGAAQVRELAREADVLVENYKVGTLRRYGLDYDRLKAINP 125
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+L+Y S+TGFG GP D+PGYD + +GGL+ TG PDG P + G+A +DL+TG
Sbjct: 126 RLVYLSITGFGQDGPMADKPGYDYVFQGMGGLMSYTGQPDGSPGAGPLRTGVAVVDLSTG 185
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA AV+AAL ++ TG GQ +D LL V++ N GANYL +G +R G +H N
Sbjct: 186 MYATSAVLAALYQRHATGVGQHLDIALLDVAVALNANQGANYLVSGENPQRSGNAHPNCA 245
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P++VF+ ++GY+ + G+D Q+ C V + LA D RY T
Sbjct: 246 PYEVFRCADGYLILAIGNDGQFARFCAVAGMADLAQDARYAT 287
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 2/115 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C V + LA D RY T + R+EN L + +T W F P+ ++
Sbjct: 270 FCAVAGMADLAQDARYATNSARIENLPQLRALLTEIFPTRTRTAWTDAFDAAGVPWGPIH 329
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHT 115
++ +VFA ++ L + H G + +V + T P PPP LGEHT
Sbjct: 330 TMEEVFAHPQVRHRGLQQFAEHPVMGTVPMVRNPMLAGHTGPS--QPPPLLGEHT 382
>gi|395492611|ref|ZP_10424190.1| L-carnitine dehydratase/bile acid-inducible protein F [Sphingomonas
sp. PAMC 26617]
Length = 415
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 129/278 (46%), Positives = 186/278 (66%), Gaps = 5/278 (1%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-NNTELSTYFT 275
L V++LDL+R++AGP+ T +L DLGA+++K+EQP GD+ R+WG P L + + S YF
Sbjct: 15 LEGVKVLDLSRVLAGPWATQMLGDLGADILKIEQPGQGDDTRRWGGPALADGSGDSAYFL 74
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
C NRNK+S+ +D TPEG +I+ LA Q D++VENF G L + L + LS +N +LIY
Sbjct: 75 CANRNKRSLAIDLSTPEGAALIRRLALQSDIVVENFRVGGLAKYGLDHAALSALNPRLIY 134
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATGLYAH 391
CS+TGFG GPY D+ GYD + ++GGL+ ITG PD G P KVG+ +DL TG YA
Sbjct: 135 CSITGFGQTGPYADKGGYDFLIQAMGGLMSITGLPDGVPGGGPMKVGVPIVDLFTGTYAT 194
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A++AAL H+ TG+GQ IDC LL TQ+SML N + YLN G R G H ++VP++
Sbjct: 195 VAILAALRHRDATGQGQHIDCALLDTQLSMLSNQASRYLNGGAVPGRLGNDHPDIVPYRD 254
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+ ++G + + G+D+Q++D ++ L L DPR+ +
Sbjct: 255 YACADGDIVVALGNDRQFRDFAAILGLGALLEDPRFAS 292
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 57/139 (41%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
++ L L DPR+ + +LR NR L + ++ ++ + P +V
Sbjct: 275 FAAILGLGALLEDPRFASVSLRSANRAALHDLVGPAVARWQVDDLVVAMEAAKLPAGKVQ 334
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I ++ AD + V+ ++ + +++VG V S T PP G T VL
Sbjct: 335 GIPEILADPQVAARGAVQTLARDDGTPLRVVGFPVILSETPARYDRAPPRAGTDTRAVLA 394
Query: 121 DLLNYDETTIAKLKEKKIL 139
++L E + L ++
Sbjct: 395 EVLGVSEVELDALAAGGVI 413
>gi|83747683|ref|ZP_00944718.1| CAIB/BAIF family protein [Ralstonia solanacearum UW551]
gi|207744019|ref|YP_002260411.1| acyl-coa transferases/carnitine dehydratase protein [Ralstonia
solanacearum IPO1609]
gi|83725593|gb|EAP72736.1| CAIB/BAIF family protein [Ralstonia solanacearum UW551]
gi|206595421|emb|CAQ62348.1| acyl-coa transferases/carnitine dehydratase protein [Ralstonia
solanacearum IPO1609]
Length = 406
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 134/282 (47%), Positives = 187/282 (66%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDLTR++AGP+C LAD GA+VIKVE+P GD+ R WGPP+L N+T +
Sbjct: 4 LSHLRVLDLTRVLAGPWCAQNLADFGADVIKVERPGAGDDTRAWGPPWLKDGAGNDTAEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+S+ VD TPEGQ+I++ LA DV++EN+ G+L + L Y+ L +
Sbjct: 64 AYYLAANRNKRSITVDISTPEGQEIVRRLAAHSDVVLENYKVGQLKKYGLDYEALKAVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCS+TGFG GPY R GYD I +GG + +TG P G P K G+A DL TG
Sbjct: 124 DLVYCSITGFGQTGPYAARAGYDFIVQGMGGFMSLTGERDDLPGGGPQKAGVAISDLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA AV+AAL H+ +TG+GQ ID LL QV+ML N+ NYL +G +RWG +H N+V
Sbjct: 184 MYATVAVLAALAHRDRTGEGQYIDMALLDVQVAMLANMNTNYLASGQAPRRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+T++G++ + G+D Q++ L LA DPR+ T
Sbjct: 244 PYQTFQTADGWIIVAVGNDGQFRRFVDAGGLPELADDPRFAT 285
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 68/134 (50%)
Query: 6 NLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQV 65
L LA DPR+ T RV NR++L + EW+ + P +N++ +V
Sbjct: 273 GLPELADDPRFATNPQRVANRDVLVPILAGMVRRLGKAEWIERLEAAGVPCGPINTLDEV 332
Query: 66 FADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNY 125
F +E ++ L ++ H G + +VG V S T P PP LGEHT+ VL+D+L+
Sbjct: 333 FDNEQVRARGLRVDLPHPSAGAVPLVGSPVRMSATPPRAVAHPPLLGEHTEAVLRDVLDL 392
Query: 126 DETTIAKLKEKKIL 139
+T I L+ + ++
Sbjct: 393 PQTRIDALRAQGVI 406
>gi|445491018|ref|ZP_21459502.1| CoA-transferase family III protein [Acinetobacter baumannii AA-014]
gi|444765116|gb|ELW89420.1| CoA-transferase family III protein [Acinetobacter baumannii AA-014]
Length = 405
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 133/284 (46%), Positives = 190/284 (66%), Gaps = 9/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
L+ +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ + T+ +
Sbjct: 4 LNGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPKVGDDTRSWGPPWMKDDSGKDTQEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK SV +D +P+GQ++IK L + DV++EN+ G L + L Y+ LS IN
Sbjct: 64 AYYQSTNRNKLSVAIDIASPDGQELIKALIQDTDVVIENYKAGSLKKYGLDYESLSAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TGFG GP + PGYD I +GGL+ +TG P G P KVG+A DLATG
Sbjct: 124 KLVYCSITGFGQTGPRAEEPGYDFIIQGMGGLMSVTGERDDLPGGGPQKVGVAFSDLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL+++ TG GQ ID LL Q++ + N G NYL++G KR+G +HAN+V
Sbjct: 184 LYSTIAIQAALLNRHVTGLGQYIDMALLDVQIATMANQGMNYLSSGNIPKRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P+QVFK S+ I G+D Q+ +C+ + L L D R+ A
Sbjct: 244 PYQVFKASDRDFIIACGNDTQFIQLCRSIGLPDLPNDVRFARNA 287
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 78/140 (55%), Gaps = 2/140 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + L L D R+ A R+++R+ + ++ + KT +EW+ P +N
Sbjct: 268 LCRSIGLPDLPNDVRFARNADRIKHRDEIIGILQTHFLTKTADEWVDAIYAAKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q F + + +++ E++H + +K++G + S T E +T PP LGEHT VL
Sbjct: 328 NLEQAFEEPQVIAREMLVEMNHPQREKLKVIGSPIKLSRTPVEYKTAPPLLGEHTQAVLG 387
Query: 121 DLLNYDETTIAKLKEKKILG 140
+++ ++ +A+LKEK ++G
Sbjct: 388 RVVSSEK--LAELKEKGVIG 405
>gi|386713218|ref|YP_006179541.1| CAIB/BAIF family protein [Halobacillus halophilus DSM 2266]
gi|384072774|emb|CCG44264.1| CAIB/BAIF family protein [Halobacillus halophilus DSM 2266]
Length = 398
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 129/273 (47%), Positives = 182/273 (66%), Gaps = 2/273 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L +R+LDLTR++AGP+C+M+L DLGA+VIKVE P D+ RKWGPPF +S Y+ C
Sbjct: 8 LEGIRVLDLTRVLAGPYCSMILGDLGADVIKVEAPGGSDDTRKWGPPFQEG--VSAYYAC 65
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
NRNKKS+ ++ K +G II+ L + DV++ NF G ++RL LGY L ++N ++YC
Sbjct: 66 ANRNKKSLTINLKAEKGTNIIRQLVSESDVILHNFKTGTMERLGLGYDQLKKVNEGIVYC 125
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S+TGFG GPYK PGYD I ++ GL+ ITG+ + P K G+A D+ TGLYA V A
Sbjct: 126 SITGFGETGPYKHLPGYDFIIQAMSGLMSITGNEESGPQKTGVAITDILTGLYACIGVQA 185
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
ALL + +G GQ++D +L VS L+N+G+NYL +G R G HAN+VP+Q F+T +
Sbjct: 186 ALLERSHSGYGQQLDLSLYDAAVSSLVNIGSNYLMSGDIPGRLGNHHANIVPYQTFRTKD 245
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
G + I G+D Q+ +C+V+ LA D R+ T
Sbjct: 246 GDMVIAVGNDIQFASLCQVIQKPELAADIRFRT 278
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 77/139 (55%), Gaps = 1/139 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+V+ LA D R+ T RV +R+ L ++ +EK T+ W QG + P+ +
Sbjct: 261 LCQVIQKPELAADIRFRTNPDRVSHRQELIPLLQEGFLEKPTDYWKEKCQGANIPFGPIY 320
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ +F D +++ ++ + H K G IK++G + S ++ +++ PP GEHTD +LK
Sbjct: 321 TLDDLFLDPQLKEREMFLKAEHPKAGPIKMIGSPLKLSRSKVKLKRHPPEPGEHTDEILK 380
Query: 121 DLLNYDETTIAKLKEKKIL 139
L Y + I +L++ ++
Sbjct: 381 S-LGYKKKEIEELRKMSVI 398
>gi|431800185|ref|YP_007227088.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
putida HB3267]
gi|430790950|gb|AGA71145.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
putida HB3267]
Length = 406
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 134/294 (45%), Positives = 191/294 (64%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGA+VIKVE+P +GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWSGQILADLGADVIKVERPGSGDDTRSWGPPFLKDAEGENTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF EGQ+++++LA++ D+++ENF G L L Y+ L IN
Sbjct: 64 AYYLSANRNKRSVTIDFTQAEGQRLVRELAEKSDIVIENFKVGGLAAYGLDYQSLKAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 RLIYCSITGFGQTGPYARRAGYDFMIQGLGGLMSLTGRPEGEEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ +TG GQ +D LL QV+ L N NYL G +R G +H N+V
Sbjct: 184 LYSTVAILAALAHREQTGVGQHVDMALLDVQVACLANQAMNYLTTGNPPRRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ T L +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDSQFRKFAEVAGQPQWADDPRFATNKLRVANRAELI 297
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 65/139 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ T LRV NR L I T+ KTT EW+ + P +N
Sbjct: 268 FAEVAGQPQWADDPRFATNKLRVANRAELIPLIRQATVFKTTAEWVSQLEAAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++Q+F D + L I H G + V + S T E R PP LGEHT+ VL+
Sbjct: 328 DLAQMFQDPQVLARGLAVSIPHPLAGSVPQVASPIRLSETPVEYRRAPPLLGEHTEVVLE 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
D+L + +L+ +L
Sbjct: 388 DVLGLGAGEVQRLRSAGVL 406
>gi|77456346|ref|YP_345851.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
fluorescens Pf0-1]
gi|77380349|gb|ABA71862.1| putative CoA-transferase [Pseudomonas fluorescens Pf0-1]
Length = 406
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 138/294 (46%), Positives = 187/294 (63%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWAGQILADLGAEVIKVERPGNGDDTRAWGPPFLKDAYGENTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++++LA + D+L+ENF G L L Y+ L IN
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQKLVRELAAKSDILIENFKVGGLAAYGLDYESLKAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 DLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPEGDEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ G GQ ID LL QV+ L N NYL G KR G +H N+V
Sbjct: 184 LYSTVAILAALAHRDHDGGGQHIDMALLDVQVACLANQAMNYLTTGTAPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ T L +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAEVAGQPQWADDPRFATNKLRVANRAVLI 297
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 67/139 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ T LRV NR +L I T+ KTT EW+ + P +N
Sbjct: 268 FAEVAGQPQWADDPRFATNKLRVANRAVLIPLIRQATVFKTTAEWVAQLEQAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+SQVF D ++ L E+ H G + V + S T E R PP LGEHT VL+
Sbjct: 328 DLSQVFEDPQVKSRGLAIELPHALAGMVPQVASPIRLSRTPVEYRHAPPLLGEHTLEVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L +A +KE +L
Sbjct: 388 RVLGLGAGAVAAMKEDGVL 406
>gi|395795534|ref|ZP_10474839.1| alpha-methylacyl-CoA racemase [Pseudomonas sp. Ag1]
gi|421142493|ref|ZP_15602468.1| single-strand DNA-binding protein [Pseudomonas fluorescens BBc6R8]
gi|395340320|gb|EJF72156.1| alpha-methylacyl-CoA racemase [Pseudomonas sp. Ag1]
gi|404506392|gb|EKA20387.1| single-strand DNA-binding protein [Pseudomonas fluorescens BBc6R8]
Length = 410
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 135/294 (45%), Positives = 191/294 (64%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ +R+LDL+R++AGP+C +LADLGAEVIK+E+P +GD+ R WGPP++ ++ +
Sbjct: 4 LTGLRVLDLSRVLAGPWCGQVLADLGAEVIKIERPQSGDDTRGWGPPWMKTDTGESSGQA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+Y+ NR K SV +D T EGQ++++ LA DVL+EN+ G L R L Y L+EIN
Sbjct: 64 SYYQSTNRGKLSVAIDLATSEGQELVRALAASSDVLIENYKAGSLARYGLDYATLAEINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TGFG GP + PGYD I IGGL+ ITG P G P KVG+A DL TG
Sbjct: 124 RLVYCSITGFGQTGPRAEEPGYDFIIQGIGGLMSITGERDDLPGGGPQKVGVAFSDLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL + +TG GQ ID LL QV+ L N NYL +G +R+G +HAN+V
Sbjct: 184 LYSTVAIQAALLSRERTGVGQHIDMALLDVQVATLANQSMNYLASGKVPQRFGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+QVF+ ++ I G+D Q+ +C + L HL DPR+ A +A + ++
Sbjct: 244 PYQVFRAADRDFIIACGNDSQFVALCHSIGLPHLPEDPRFRRNADRVAHRAEIV 297
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 71/145 (48%), Gaps = 3/145 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L HL DPR+ A RV +R + + + A + +T +EW+ P +N
Sbjct: 268 LCHSIGLPHLPEDPRFRRNADRVAHRAEIVELLSAHFLGRTADEWVASIHASKVPVGAIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I+Q + + L+ +I H + ++VG + S T E P P LG+HTD VL
Sbjct: 328 NIAQSLEEPQVIARGLMVKIPHPRNPQFEMVGSPIKMSGTPVEYVRPAPMLGQHTDEVLG 387
Query: 121 DLLNYDETTIAKLKEKKILGLIERL 145
+ L + +LK G+IE+L
Sbjct: 388 ERLGLSAEQLGQLKAG---GVIEQL 409
>gi|388544220|ref|ZP_10147509.1| family III CoA-transferase [Pseudomonas sp. M47T1]
gi|388278048|gb|EIK97621.1| family III CoA-transferase [Pseudomonas sp. M47T1]
Length = 406
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 188/294 (63%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWAGQILADLGAEVIKVERPGNGDDTRAWGPPFLRDIEGENTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++++LA + D+++ENF G L L Y L IN
Sbjct: 64 AYYLSANRNKQSVTIDFTQPEGQRLVRELAAKSDIVIENFKVGGLAAYGLDYVSLKAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
LIYCS+TGFG GPY R GYD + +GGL+ +TG P+ P KVG+A D+ TG
Sbjct: 124 HLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPEAAEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL ++ + G GQ ID LL QV+ L N NYL G+ KR G +H N+V
Sbjct: 184 LYSTVAILAALAYRDQNGGGQHIDMALLDVQVACLANQAMNYLTTGVAPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+LT L +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDSQFRRFTEVAGQPQWADDPRFLTNKLRVANRAELI 297
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 68/139 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+LT LRV NR L I T+ KTT EW+ + V P +N
Sbjct: 268 FTEVAGQPQWADDPRFLTNKLRVANRAELIPLIRQATVFKTTTEWVTQLEAVGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD ++ L E+ H G + V + S T E R PP LGEHT VL
Sbjct: 328 DLAQVFADPQVKARGLAVELPHALAGIVPQVASPIRLSETPVEYRRAPPLLGEHTQEVLA 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
LL D AKL+ ++
Sbjct: 388 SLLGVDGEWFAKLRGDGVV 406
>gi|418531982|ref|ZP_13097891.1| L-carnitine dehydratase/bile acid-inducible [Comamonas testosteroni
ATCC 11996]
gi|371450777|gb|EHN63820.1| L-carnitine dehydratase/bile acid-inducible [Comamonas testosteroni
ATCC 11996]
Length = 415
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 135/298 (45%), Positives = 187/298 (62%), Gaps = 9/298 (3%)
Query: 213 PSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE--- 269
P+ L ++++LDL+R++AGP+ L DLGAEVIKVE+P +GD+ R WGPP++ +TE
Sbjct: 8 PAQALQHIKVLDLSRVLAGPWAAQTLGDLGAEVIKVERPGSGDDTRAWGPPYVADTEGLP 67
Query: 270 --LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLS 327
S Y+ C NRNK+S+ VDF EGQ+I++ LA +CDVL+ENF G L + L Y LS
Sbjct: 68 TGESAYYMCTNRNKQSISVDFTRGEGQEIVRQLAARCDVLIENFKTGGLAQYGLDYASLS 127
Query: 328 EINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASID 383
+N +L+YCSVTGFG GPY R GYD + +GGL+ I+GH P G P KVG+A D
Sbjct: 128 ALNPRLVYCSVTGFGQDGPYAHRAGYDFLIQGMGGLMSISGHADGQPGGGPMKVGVALTD 187
Query: 384 LATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSH 443
+ TGLYA A++AAL + TG+GQ ID LL V+ L N NYL +R G +H
Sbjct: 188 ILTGLYASTAILAALQAREHTGRGQHIDLALLDVGVACLANQSMNYLYGDQVPQRMGNAH 247
Query: 444 ANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
N VP+Q F T +G++ + G+D Q+ C+ A D R+ + A LA + L+
Sbjct: 248 PNTVPYQEFPTEDGHMILAVGNDGQFARFCQAAGRSEWAEDERFCSNAARLAHRAELV 305
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 66/140 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+ A D R+ + A R+ +R L + I T+ ++T W+ + + + P +N
Sbjct: 276 FCQAAGRSEWAEDERFCSNAARLAHRAELVEMIRRVTLTRSTRAWVQLLEQHAVPCGPIN 335
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ +VF D ++ + ++H K G + +V + S T R PP LG+HT VL+
Sbjct: 336 TVREVFEDPQVRARGMQIAMTHPKAGQVPLVASPIRLSDTPVTYRHAPPQLGQHTQEVLE 395
Query: 121 DLLNYDETTIAKLKEKKILG 140
L + +E +LG
Sbjct: 396 RHLGLSAQQMQAYQESGVLG 415
>gi|387891367|ref|YP_006321664.1| CoA-transferase, family III [Pseudomonas fluorescens A506]
gi|387161458|gb|AFJ56657.1| CoA-transferase, family III [Pseudomonas fluorescens A506]
Length = 406
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 188/294 (63%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIKVE+P +GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWSGQILADLGAEVIKVERPSSGDDTRAWGPPFLKDADGENTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ++++DLA + D+L+ENF G L L Y+ L E+N
Sbjct: 64 AYYLSANRNKESVTIDFTRPEGQKLVRDLAAKSDILIENFKVGGLAAYGLDYESLKEVNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 ELIYCSITGFGQTGPYAMRAGYDFMIQGLGGLMSLTGRPEGDEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ G GQ ID LL QV+ L N NYL G KR G +H N+V
Sbjct: 184 LYSTVAILAALAHRDHDGGGQHIDMALLDVQVACLANQAMNYLTTGAPPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A D R+ T +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAEVAGQPQWADDVRFATNRARVANRAELI 297
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 67/139 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A D R+ T RV NR L I T+ KTT EW+ + V P +N
Sbjct: 268 FAEVAGQPQWADDVRFATNRARVANRAELIPLIRQATVFKTTAEWVSQLEQVGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVF+D +Q L E+ H G + V + S T E R+ PP LGEHT VL+
Sbjct: 328 DLAQVFSDPQVQARGLAIELPHALAGTVPQVASPIRLSKTPVEYRSAPPLLGEHTLEVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L +A LKE ++
Sbjct: 388 GVLGLGAAHVAALKEAGVI 406
>gi|217968861|ref|YP_002354095.1| L-carnitine dehydratase/bile acid-inducible protein F [Thauera sp.
MZ1T]
gi|217506188|gb|ACK53199.1| L-carnitine dehydratase/bile acid-inducible protein F [Thauera sp.
MZ1T]
Length = 407
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 132/282 (46%), Positives = 183/282 (64%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
LS+VR+LDL+RI+AGP+ +LADLGA+VIKVE+P GD+ R WGPP+L + T+++
Sbjct: 5 LSHVRVLDLSRILAGPWAGQMLADLGADVIKVERPGAGDDTRGWGPPWLKDEQGADTDVA 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ C NRNK+S+ +D EGQ +++ LA + DV++ENF G L + L Y L +N
Sbjct: 65 AYYLCANRNKRSITIDITQAEGQALVRRLAAESDVVLENFKVGGLAQYGLDYDSLKAVNP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+L+YCS+TGFG GPY R GYD + +GGL+ ITG PDG P KVG+A D+ TG
Sbjct: 125 RLVYCSITGFGQDGPYAPRAGYDFLIQGLGGLMSITGRPDGEEGGGPMKVGVALTDILTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA AV+AAL + ++G+GQ ID LL QV+ L N NYL G +R G +H N+V
Sbjct: 185 LYATNAVLAALAWRERSGEGQYIDMALLDVQVACLANQAGNYLATGQSPQRLGNAHPNIV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F T++GY+ + G+D Q+ C LA D R+ T
Sbjct: 245 PYQDFPTADGYMILAIGNDGQFARFCAAAGAPQLATDERFAT 286
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 70/139 (50%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C LA D R+ T RV NR L ++ T+E+ T EW+ + ++ P +N
Sbjct: 269 FCAAAGAPQLATDERFATNRARVVNRATLIPLLKKLTVERGTAEWIAKLEALAVPCGPIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+++ VFAD +Q ++ + H G + +V + S T + R PPP LGEHTD +L
Sbjct: 329 TLADVFADPQVQAREMKVTMPHPVAGQVPLVASPMKLSATPVDYRLPPPMLGEHTDEILA 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
L D IA+L+ ++
Sbjct: 389 ATLGLDAGAIARLRADGVV 407
>gi|440738592|ref|ZP_20918119.1| putative CoA-transferase [Pseudomonas fluorescens BRIP34879]
gi|447919314|ref|YP_007399882.1| putative CoA-transferase [Pseudomonas poae RE*1-1-14]
gi|440380905|gb|ELQ17459.1| putative CoA-transferase [Pseudomonas fluorescens BRIP34879]
gi|445203177|gb|AGE28386.1| putative CoA-transferase [Pseudomonas poae RE*1-1-14]
Length = 406
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 135/294 (45%), Positives = 187/294 (63%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWAGQILADLGAEVIKVERPGKGDDTRAWGPPFLKDAYGENTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++++LA + D+L+ENF G L L Y+ L IN
Sbjct: 64 AYYLSANRNKESVTIDFTRPEGQKLVRELAAKSDILIENFKVGGLAAYGLDYESLKAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 ELIYCSITGFGQTGPYASRAGYDFMIQGLGGLMSLTGRPEGEEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ G GQ ID LL QV+ L N NYL G+ KR G +H N+V
Sbjct: 184 LYSSVAILAALAHRDHDGGGQHIDMALLDVQVACLANQAMNYLTTGVSPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ + A D R+ T + +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAEAAGQSQWADDARFATNQMRVANRAQLI 297
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 65/127 (51%)
Query: 13 DPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEHIQ 72
D R+ T +RV NR L I T+ KTT EW+ + + + P +N ++QVFAD ++
Sbjct: 280 DARFATNQMRVANRAQLIPLIRQVTVFKTTAEWVSLLERIGVPCGPINDLAQVFADPQVK 339
Query: 73 DIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETTIAK 132
L E+ H G + V + S T E R+ PP LGEHT VL+ +L +A
Sbjct: 340 ARGLAMELPHVLAGRVPQVASPMRLSKTPVEYRSAPPLLGEHTAQVLQTVLGLGPEKVAV 399
Query: 133 LKEKKIL 139
L+ ++
Sbjct: 400 LRAAGVV 406
>gi|398990944|ref|ZP_10694107.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM24]
gi|399012062|ref|ZP_10714390.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM16]
gi|398116668|gb|EJM06427.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM16]
gi|398142232|gb|EJM31135.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM24]
Length = 412
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 136/284 (47%), Positives = 183/284 (64%), Gaps = 9/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
L+ R+LDL+R++AGP+C LADLGAEVIKVE+P GD+ R WGPP++ T +
Sbjct: 4 LTGYRVLDLSRVLAGPWCGQTLADLGAEVIKVERPGVGDDTRGWGPPWMKGQSDELTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+Y+ NR K SV ++ +PEGQ +++ LA CDVL+EN+ G L + L Y L+E+N
Sbjct: 64 SYYQSTNRGKLSVALNLASPEGQALVRALATDCDVLIENYKAGSLAKYGLDYASLAELNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCSVTGFG GP PGYD I IGGL+ ITG P G P KVG+A DL TG
Sbjct: 124 RLVYCSVTGFGQTGPRAAEPGYDFIVQGIGGLMSITGERDDLPGGGPQKVGVAFSDLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL + KTG GQ ID LL QV+ L N N+L +G R+G +HAN+V
Sbjct: 184 LYSTVAIQAALLSREKTGLGQHIDMALLDVQVATLCNQSQNFLASGKPPGRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P+QVF+ S+ I G+D Q+ +C+ ++L HL DPR+ A
Sbjct: 244 PYQVFRASDQDFIIACGNDSQFVALCEAIDLAHLPEDPRFTRNA 287
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 71/145 (48%), Gaps = 3/145 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ ++L HL DPR+ A RV NRE + + + +E + W+ P +N
Sbjct: 268 LCEAIDLAHLPEDPRFTRNADRVANREAIIEILSRHFLEGRAQAWIDRIHPRGVPIGAIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI Q + ++ ++ I H D VG + S T E P P LGEHTD VLK
Sbjct: 328 SIDQALDEPQVKARNMLVTIPHPLKADFVTVGSPIKMSGTPVEYLRPAPMLGEHTDEVLK 387
Query: 121 DLLNYDETTIAKLKEKKILGLIERL 145
L D+ +A+LK G+IE+L
Sbjct: 388 RQLGLDDERLAQLKAS---GVIEQL 409
>gi|407367591|ref|ZP_11114123.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
mandelii JR-1]
Length = 406
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 138/294 (46%), Positives = 187/294 (63%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWAGQILADLGAEVIKVERPGNGDDTRAWGPPFLKDAYGENTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++++LA + D+L+ENF G L L Y+ L IN
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQKLVRELAAKSDILIENFKVGGLAAYGLDYESLKAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 NLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPEGDEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ G GQ ID LL QV+ L N NYL G KR G +H N+V
Sbjct: 184 LYSTVAILAALAHREHDGGGQHIDMALLDVQVACLANQAMNYLTTGNAPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ T L +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAEVAGQPQWADDPRFATNKLRVANRAVLI 297
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 69/139 (49%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ T LRV NR +L I T+ KTT EW+L + P +N
Sbjct: 268 FAEVAGQPQWADDPRFATNKLRVANRAVLIPLIRQATVFKTTAEWVLQLEQAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++Q+FAD ++ L E+ H G + V + S T E R PP LGEHT VL+
Sbjct: 328 DLAQMFADPQVKARGLAIELPHVLAGMVPQVASPIRLSETPVEYRNAPPLLGEHTLEVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L D T+A K +L
Sbjct: 388 RVLGLDAETVAAFKVAGVL 406
>gi|421653199|ref|ZP_16093540.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC0162]
gi|408503436|gb|EKK05206.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC0162]
Length = 405
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 133/284 (46%), Positives = 189/284 (66%), Gaps = 9/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ +T+ +
Sbjct: 4 LNGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPKVGDDTRSWGPPWMKDDSGQDTQEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK SV +D + EGQ++IK L + DV++EN+ G L + L Y+ LS IN
Sbjct: 64 AYYQSTNRNKLSVAIDIASSEGQELIKALIQDTDVVIENYKAGSLKKYGLDYESLSAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TGFG GP + PGYD I +GGL+ +TG P G P KVG+A DLATG
Sbjct: 124 KLVYCSITGFGQNGPRAEEPGYDFIIQGMGGLMSVTGERDDLPGGGPQKVGVAFSDLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL+++ TG GQ ID LL Q++ + N G NYL++G KR+G +HAN+V
Sbjct: 184 LYSTIAIQAALLNRHVTGLGQYIDMALLDVQIATMANQGMNYLSSGNIPKRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P+QVFK S+ I G+D Q+ +C+ + L L D R+ A
Sbjct: 244 PYQVFKASDRDFIIACGNDTQFTQLCRSIGLPDLPNDVRFARNA 287
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 78/140 (55%), Gaps = 2/140 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + L L D R+ A R+++R+ + ++ + KT +EW+ P +N
Sbjct: 268 LCRSIGLPDLPNDVRFARNADRIKHRDEIIGILQTHFLTKTADEWVEAIYAAKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q F + + +++ E++H + +K++G + S T E +T PP LGEHT VL
Sbjct: 328 NLEQAFQEPQVIAREMLVEMNHPQREKLKVIGSPIKLSRTPVEYKTAPPLLGEHTQAVLG 387
Query: 121 DLLNYDETTIAKLKEKKILG 140
+++ ++ +A+LKEK ++G
Sbjct: 388 RMVSSEK--LAELKEKGVIG 405
>gi|374371746|ref|ZP_09629677.1| L-carnitine dehydratase/bile acid-inducible protein F [Cupriavidus
basilensis OR16]
gi|373096690|gb|EHP37880.1| L-carnitine dehydratase/bile acid-inducible protein F [Cupriavidus
basilensis OR16]
Length = 390
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 135/290 (46%), Positives = 187/290 (64%), Gaps = 11/290 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE------- 269
L+ +++LDL+RI+AGP+CT LADLGAEV KVE+P GD+ R WGPP+L E
Sbjct: 6 LAGIKVLDLSRILAGPWCTQNLADLGAEVTKVERPGHGDDTRGWGPPYLQAPEGADGADG 65
Query: 270 LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEI 329
LS YF C NR K+SV +D+ TPEG I++LA+Q DVLVEN+ G L R L Y L +
Sbjct: 66 LSAYFICCNRGKQSVAIDYATPEGAAQIRELARQADVLVENYKVGTLRRYGLDYDTLKAL 125
Query: 330 NSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLA 385
N +L+Y S+TGFG GP D+PGYD + +GGL+ TGH DG P + G+A +DL
Sbjct: 126 NPRLVYLSITGFGQSGPMADKPGYDYVFQGMGGLMSYTGHADGEPGAGPLRTGVAVVDLT 185
Query: 386 TGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHAN 445
TG+YA AV+AALL ++ TG G+ +D LL V++ N +NYL +G +R G +H N
Sbjct: 186 TGMYATSAVLAALLRRHATGAGEYLDIALLDVAVALNANQASNYLVSGKAPQRSGNAHPN 245
Query: 446 VVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILA 495
P++VF+ ++GY+ + G+D Q+ C+V L LA D RY T + +A
Sbjct: 246 CAPYEVFRCADGYLILAIGNDTQFARFCEVAGLGVLATDTRYATNSARIA 295
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 3/115 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V L LA D RY T + R+ N L K + + + W F P+ ++
Sbjct: 272 FCEVAGLGVLATDTRYATNSARIANLPALRKLLTEVFPTRDRQSWTQAFDAAGVPWGPIH 331
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIV-GPAVAYSLTQPEVRTPPPALGEH 114
S+ +VFA + +LV+E H G + ++ P +A S + PPP L EH
Sbjct: 332 SMEEVFAHPQVAHRQLVQEAEHPVLGRVPMIRNPMLAGSGAR--ALAPPPLLDEH 384
>gi|330934733|ref|XP_003304679.1| hypothetical protein PTT_17328 [Pyrenophora teres f. teres 0-1]
gi|311318561|gb|EFQ87180.1| hypothetical protein PTT_17328 [Pyrenophora teres f. teres 0-1]
Length = 454
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 131/287 (45%), Positives = 189/287 (65%), Gaps = 9/287 (3%)
Query: 215 LPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPP---FLNNTEL- 270
LPL+ +++LD+TR++AGP+CT +L DLGA+VIK+E P GD+ R WGPP +++ E
Sbjct: 49 LPLAGIKVLDMTRVLAGPYCTQILGDLGADVIKIEHPTRGDDTRSWGPPDAPYIDGVERQ 108
Query: 271 ----STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHL 326
S Y+ VNRNK+SV + F P G I+ LA++CDVLVEN++PG L + L Y L
Sbjct: 109 FPGESAYYLSVNRNKRSVGLAFNNPTGISILHQLAQKCDVLVENYLPGSLAKYQLDYATL 168
Query: 327 SEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLAT 386
+++N LIY SVTG+G GPY+DR GYD++ + GL+HITG DGPP KVG+A D+ T
Sbjct: 169 AKLNPSLIYASVTGYGQTGPYRDRAGYDVMVEAEMGLMHITGERDGPPVKVGVAVTDIMT 228
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGI-EGKRWGTSHAN 445
G+Y + AAL + +TG GQ ID +L QV+ L N+ ++ L G + RWGT+HA
Sbjct: 229 GMYTAIGIQAALYSRKETGLGQWIDASLSDVQVAGLANIASSALVTGKGDSGRWGTAHAT 288
Query: 446 VVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
VVP++ +KT + + +G +D+ Y +C ++ DPR+LT AL
Sbjct: 289 VVPYRAYKTKDTNIAVGGCNDRLYGILCDKLSRPEWKTDPRFLTNAL 335
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 88/139 (63%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ DPR+LT ALRV++R + +EA+ M KTT+EWL IF+G PYA VN
Sbjct: 315 LCDKLSRPEWKTDPRFLTNALRVKHRTTIDALVEAELMTKTTQEWLEIFEGSGMPYAAVN 374
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I EH+ +++E+ H G +K+V V YS +P++R+PPP LG+HTD +L+
Sbjct: 375 DIKGTMEHEHVLARNMIEEVEHPAVGKVKLVNHPVKYSRVEPKIRSPPPLLGQHTDEILR 434
Query: 121 DLLNYDETTIAKLKEKKIL 139
++L Y E I +L+E K++
Sbjct: 435 EVLGYGEAEIKELREGKVV 453
>gi|225556561|gb|EEH04849.1| CAIB/BAIF family enzyme [Ajellomyces capsulatus G186AR]
Length = 390
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 131/303 (43%), Positives = 193/303 (63%), Gaps = 8/303 (2%)
Query: 198 YENFYSLDLALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDEC 257
+ +F + + +LPL+ +R+LD++R++AGP+CT +L DLGAEVIK+E P GD+
Sbjct: 30 WRSFVTAATTTAQSIDNLPLAGIRVLDMSRVLAGPYCTQILGDLGAEVIKIEHPTRGDDT 89
Query: 258 RKWGPPFL-------NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVEN 310
R WGPPF S Y+ VNRNKKS+ + F P G +I+ L K+CD+LVEN
Sbjct: 90 RAWGPPFAKYKVDGKEGPGESAYYLSVNRNKKSLGLSFAHPSGVEILHKLVKECDILVEN 149
Query: 311 FVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHP 370
++PG L + + Y + IN +LIY S+TG+G GPY R GYD++ + GL+HITG
Sbjct: 150 YIPGSLKKYKMDYDTVKVINPKLIYASITGYGQTGPYSQRAGYDVMVEAEMGLMHITGSR 209
Query: 371 DGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYL 430
DGPP KVG+A DL TGLY A+MAALL + KTGKGQ ID L QV+ L N+ ++ L
Sbjct: 210 DGPPVKVGVAVTDLTTGLYTSNAIMAALLARAKTGKGQHIDACLSDCQVATLSNLASSAL 269
Query: 431 NAG-IEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+G + RWGT+H ++VP++ ++T +G + +G G+DK + +C + +D R+++
Sbjct: 270 ISGEKDSGRWGTAHPSIVPYRAYETKDGDILLGGGNDKLFGLLCDGLGQPEWKVDERFVS 329
Query: 490 GAL 492
L
Sbjct: 330 NNL 332
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 43/70 (61%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + +D R+++ LRV+NRE+L K IE KT +KTT+EWL IF+G PY+ +N
Sbjct: 312 LCDGLGQPEWKVDERFVSNNLRVKNREVLDKMIENKTKQKTTQEWLEIFEGSGMPYSAIN 371
Query: 61 SISQVFADEH 70
I + H
Sbjct: 372 DIQGTLNNPH 381
>gi|425751091|ref|ZP_18869045.1| CoA-transferase family III protein [Acinetobacter baumannii WC-348]
gi|445457193|ref|ZP_21446338.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC047]
gi|425484876|gb|EKU51276.1| CoA-transferase family III protein [Acinetobacter baumannii WC-348]
gi|444776773|gb|ELX00810.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC047]
Length = 405
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 133/284 (46%), Positives = 189/284 (66%), Gaps = 9/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ +T+ +
Sbjct: 4 LNGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPKVGDDTRSWGPPWMKDDSGQDTQEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK SV +D + EGQ++IK L + DV++EN+ G L + L Y+ LS IN
Sbjct: 64 AYYQSTNRNKLSVAIDIASSEGQELIKALIQDTDVVIENYKAGSLKKYGLDYESLSAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TGFG GP + PGYD I +GGL+ +TG P G P KVG+A DLATG
Sbjct: 124 KLVYCSITGFGQNGPRAEEPGYDFIIQGMGGLMSVTGERDDLPGGGPQKVGVAFSDLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL+++ TG GQ ID LL Q++ + N G NYL++G KR+G +HAN+V
Sbjct: 184 LYSTIAIQAALLNRHVTGLGQYIDMALLDVQIATMANQGMNYLSSGNIPKRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P+QVFK S+ I G+D Q+ +C+ + L L D R+ A
Sbjct: 244 PYQVFKASDRDFIIACGNDTQFTQLCRSIGLPDLPNDVRFARNA 287
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 78/140 (55%), Gaps = 2/140 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + L L D R+ A R+++R+ + ++ + KT +EW+ P +N
Sbjct: 268 LCRSIGLPDLPNDVRFARNADRIKHRDEIIGILQTHFLTKTADEWVDAIYAAKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q F + + +++ E++H + +K++G + S T E +T PP LGEHT VL
Sbjct: 328 NLEQAFQEPQVIAREMLVEMNHPQREKLKVIGSPIKLSRTPVEYKTAPPLLGEHTQAVLG 387
Query: 121 DLLNYDETTIAKLKEKKILG 140
+++ ++ +A+LKEK ++G
Sbjct: 388 RMVSSEK--LAELKEKGVIG 405
>gi|260574057|ref|ZP_05842062.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhodobacter
sp. SW2]
gi|259023523|gb|EEW26814.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhodobacter
sp. SW2]
Length = 371
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 133/287 (46%), Positives = 186/287 (64%), Gaps = 4/287 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNT--ELSTY 273
PL+ V++++L RI+AGP+ LADLGAEVIKVE P GD+ R+WGPPF+++ + Y
Sbjct: 3 PLAGVKVVELARILAGPWAGQTLADLGAEVIKVEAP-EGDDTRRWGPPFIDHEGERSAAY 61
Query: 274 FTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQL 333
F NR K+SV DF+TPEGQ +++ L DV++ENF G L + L Y L +N +L
Sbjct: 62 FHATNRGKRSVVCDFRTPEGQALVRALVADADVVIENFKVGGLAKYGLDYASLRAVNPRL 121
Query: 334 IYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGA 393
+YCS+TGFG GPY R GYD I + GL+ +TG PDGPP KVG+A D+ TG+YA A
Sbjct: 122 VYCSITGFGQTGPYAHRAGYDFIIQGMSGLMSVTGEPDGPPEKVGVAVTDIFTGVYAATA 181
Query: 394 VMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFK 453
++AAL + TG GQ+ID LL S++ N NYL G+ R G +H N+ P+ VF+
Sbjct: 182 ILAALHQRATTGVGQQIDMALLDVATSIMANQAMNYLATGVAPNRMGNAHPNLTPYAVFE 241
Query: 454 TSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHL 500
++G++ I TG+D QYQ +C ++ L LA +P Y T A +A + L
Sbjct: 242 CADGWIIIATGNDGQYQRLCGLLGLPELASEP-YQTNADRVANRAEL 287
>gi|386334230|ref|YP_006030401.1| formyl-coenzyme a transferase (formyl-CoA transferase) [Ralstonia
solanacearum Po82]
gi|334196680|gb|AEG69865.1| formyl-coenzyme a transferase (formyl-CoA transferase) [Ralstonia
solanacearum Po82]
Length = 406
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 134/282 (47%), Positives = 188/282 (66%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDLTR++AGP+C LAD GA+VIKVE+P GD+ R WGPP+L N+T +
Sbjct: 4 LSHLRVLDLTRVLAGPWCAQNLADFGADVIKVERPGAGDDTRAWGPPWLKDAAGNDTAEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+S+ VD TPEGQ+I++ LA DV++EN+ G+L + L Y+ L +
Sbjct: 64 AYYLAANRNKRSITVDISTPEGQEIVRRLAAHSDVVLENYKVGQLKKYGLDYEALKVVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCS+TGFG GPY R GYD I +GG + +TG P G P K G+A DL TG
Sbjct: 124 DLVYCSITGFGQTGPYAARAGYDFIVQGMGGFMSLTGERDDLPGGGPQKAGVAISDLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA AV+AAL H+ +TG+GQ ID LL QV+ML N+ NYL +G +RWG +H N+V
Sbjct: 184 MYATVAVLAALAHRDRTGEGQYIDMALLDVQVAMLANMNTNYLASGQAPRRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+T++G++ + G+D Q++ + L LA DPR+ T
Sbjct: 244 PYQTFQTADGWIIVAVGNDGQFRRFAEAGGLPGLADDPRFAT 285
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+ L LA DPR+ T RV NR++L + EW+ + P +N
Sbjct: 268 FAEAGGLPGLADDPRFATNPQRVANRDVLVPILAGMVRRLGKAEWIERLEAAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ +VF +E +Q L ++ H G + +VG V S T P PP LGEHT+ VL+
Sbjct: 328 TLDEVFDNEQVQARGLRIDLPHPSAGAVPLVGNPVRMSATPPRAVAHPPLLGEHTEAVLR 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
D+L+ + I L+ + ++
Sbjct: 388 DVLDLPQAQIDALRAQGVI 406
>gi|294955456|ref|XP_002788514.1| Protein C7orf10, putative [Perkinsus marinus ATCC 50983]
gi|239904055|gb|EER20310.1| Protein C7orf10, putative [Perkinsus marinus ATCC 50983]
Length = 440
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 136/295 (46%), Positives = 188/295 (63%), Gaps = 8/295 (2%)
Query: 195 ISLYENFYSLDLALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTG 254
I+L+ F SS LPL VR++DLTRI+AGP+ M+LAD GAEVIKVE+P G
Sbjct: 19 ITLWRGF-------SSSTAPLPLHGVRVIDLTRILAGPYGGMMLADYGAEVIKVEKPGVG 71
Query: 255 DECRKWGPPFLNNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPG 314
D+ R WGPPF + S YF NRNK S+ V+ KTPEGQQIIKDL K D+++EN+VPG
Sbjct: 72 DDARAWGPPFTHKGRESAYFIAPNRNKHSIGVNLKTPEGQQIIKDLVKVSDIVIENYVPG 131
Query: 315 KLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPP 374
L + L Y+ L + N L+Y S+TG+G GP KDRPGY ++ G++ TG D P
Sbjct: 132 TLAKYGLDYESLRKFNPALVYGSLTGYGDTGPDKDRPGYALMVEGRCGMMACTGIGD-QP 190
Query: 375 CKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGI 434
K+G+A D+ GL+ HG V+AAL + TG+G+ + C+LL +QVS + NV + YL G+
Sbjct: 191 VKIGVAWTDILAGLHLHGGVLAALYNAKVTGQGRHVKCSLLESQVSAMANVASGYLIGGV 250
Query: 435 EGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
E R GT H N+VP+ F T++G++ G +D Q++ C V+ L D ++ T
Sbjct: 251 ECARMGTQHPNIVPYGAFPTADGHIVAGALNDAQWKSFCNVLGRPDLEEDEKFKT 305
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 73/148 (49%), Gaps = 6/148 (4%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGV----SFPY 56
C V+ L D ++ T R +R+ L + K TEEW+ + + +
Sbjct: 288 FCNVLGRPDLEEDEKFKTNEARCNHRDELNGILNEILKTKRTEEWMALLDVLPHKERLAH 347
Query: 57 AQVNSISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAY--SLTQPEVRTPPPALGEH 114
++ ++ VF+D + + + H G I +VGPAV + + + E PPPALGEH
Sbjct: 348 DKLQNMQGVFSDPQVLARGMKLTVEHATAGPIDVVGPAVKFEPAPLKGEKSLPPPALGEH 407
Query: 115 TDYVLKDLLNYDETTIAKLKEKKILGLI 142
T +VL+ L Y + IA+L E +I+ ++
Sbjct: 408 TKWVLQKCLGYSDEKIARLAEDRIVHIM 435
>gi|410474288|ref|YP_006897569.1| hypothetical protein BN117_3807 [Bordetella parapertussis Bpp5]
gi|408444398|emb|CCJ51140.1| conserved hypothetical protein [Bordetella parapertussis Bpp5]
Length = 408
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 132/286 (46%), Positives = 182/286 (63%), Gaps = 9/286 (3%)
Query: 213 PSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NN 267
P+ PL R+LDLTR++AGP+CT LADLGAEVIKVE+P GDE R WGPP++ +
Sbjct: 2 PNKPLQKYRVLDLTRVLAGPWCTQNLADLGAEVIKVERPGVGDETRGWGPPWIPAGAASK 61
Query: 268 TELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLS 327
S YF NR KKS+ +DF T +GQ +++ LA CDVLVEN+ G L R LGY+ L
Sbjct: 62 RRDSAYFGSANRGKKSITIDFTTAQGQALVRQLAADCDVLVENYKTGTLARYGLGYEDLK 121
Query: 328 EINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASID 383
+N L+YCSVTGFG GPY+ +PGYD + ++ GL+ ITG P G P KVGIA D
Sbjct: 122 AVNPGLVYCSVTGFGHTGPYRHKPGYDFVFQAMSGLMSITGERDDLPGGGPQKVGIAVAD 181
Query: 384 LATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSH 443
+ TG+Y+ AV+AALL + G+GQ +D LL ++ N NY+ +G +R+G +H
Sbjct: 182 ITTGMYSTVAVLAALLERESHGRGQHLDMALLDCAIAFNSNQAVNYMASGSMPRRYGNAH 241
Query: 444 ANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+N VP+QVF T +G + + G+D + C+ L+ D R++T
Sbjct: 242 SNAVPYQVFDTRDGQIVVAVGNDALFAAYCRAAQRPDLSADARFVT 287
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 66/138 (47%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C+ L+ D R++T + R++NR+ L ++ KT+ +WL + P A +N
Sbjct: 271 CRAAQRPDLSADARFVTVSGRLQNRDELLSQLAVVMAGKTSAQWLAVLDAAGVPCAPIND 330
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
Q AD ++ + I+ E + + + +S T + PP LG+HT VL++
Sbjct: 331 FKQALADPQVKARNIETHIALEDGAVFRTIASPLRFSETPLDHLAGPPTLGQHTADVLRE 390
Query: 122 LLNYDETTIAKLKEKKIL 139
L DE A L++ ++
Sbjct: 391 RLGLDEAQQAGLRQAGVI 408
>gi|395499604|ref|ZP_10431183.1| alpha-methylacyl-CoA racemase [Pseudomonas sp. PAMC 25886]
Length = 410
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 135/294 (45%), Positives = 191/294 (64%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ +R+LDL+R++AGP+C +LADLGAEVIK+E+P +GD+ R WGPP++ ++ +
Sbjct: 4 LTGLRVLDLSRVLAGPWCGQVLADLGAEVIKIERPQSGDDTRGWGPPWMKTDTGESSGQA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+Y+ NR K SV +D T EGQ++++ LA DVL+EN+ G L R L Y L+EIN
Sbjct: 64 SYYQSTNRGKLSVAIDLATREGQELVRALAASSDVLIENYKAGSLARYGLDYATLAEINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TGFG GP + PGYD I IGGL+ ITG P G P KVG+A DL TG
Sbjct: 124 RLVYCSITGFGQTGPRAEEPGYDFIIQGIGGLMSITGERDDLPGGGPQKVGVAFSDLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL + +TG GQ ID LL QV+ L N NYL +G +R+G +HAN+V
Sbjct: 184 LYSTVAIQAALLSRERTGVGQHIDMALLDVQVATLANQSMNYLASGKVPQRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+QVF+ ++ I G+D Q+ +C + L HL DPR+ A +A + ++
Sbjct: 244 PYQVFRAADRDFIIACGNDSQFIALCHSIGLPHLPQDPRFRRNADRVAHRAEIV 297
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 72/145 (49%), Gaps = 3/145 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L HL DPR+ A RV +R + + + A + +T +EW+ P +N
Sbjct: 268 LCHSIGLPHLPQDPRFRRNADRVAHRAEIVELLSAHFLGRTADEWVASIHASKVPVGAIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I+Q + + L+ +I H K + ++VG + S T E P P LG+HTD VL
Sbjct: 328 NIAQSLEEPQVIARGLMVKIPHPKNPEFEMVGSPIKMSGTPVEYVRPAPMLGQHTDEVLG 387
Query: 121 DLLNYDETTIAKLKEKKILGLIERL 145
+ L + +LK G+IE+L
Sbjct: 388 ERLGLSAEQLGQLKAG---GVIEQL 409
>gi|397698268|ref|YP_006536151.1| CAIB/BAIF family protein [Pseudomonas putida DOT-T1E]
gi|397334998|gb|AFO51357.1| CAIB/BAIF family protein [Pseudomonas putida DOT-T1E]
Length = 412
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 137/284 (48%), Positives = 182/284 (64%), Gaps = 9/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
L+ R+LDL+R++AGP+C LADLGAEVIKVE+P GD+ R WGPP++ T +
Sbjct: 4 LTGYRVLDLSRVLAGPWCGQTLADLGAEVIKVERPGAGDDTRGWGPPWMKGQHDQLTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+Y+ NR K SV ++ +PEGQ +++ LA CDVL+EN+ G L + L Y LS++N
Sbjct: 64 SYYQSTNRGKLSVALNLASPEGQALVRALATDCDVLIENYKTGSLAKYGLDYASLSQLNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCSVTGFG GP PGYD I IGGL+ ITG P G P KVG+A DL TG
Sbjct: 124 RLVYCSVTGFGQTGPRAAEPGYDFIVQGIGGLMSITGERDDLPGGGPQKVGVAFSDLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL + KTG GQ ID LL QV+ L N NYL +G R+G +HAN+V
Sbjct: 184 LYSTVAIQAALLSREKTGVGQHIDMALLDVQVATLCNQSQNYLASGKPPGRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P+QVF+ S+ I G+D Q+ +C+ + L HL DPR+ A
Sbjct: 244 PYQVFRASDQDFIIACGNDSQFVALCEAIGLPHLPEDPRFTRNA 287
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 73/145 (50%), Gaps = 3/145 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + L HL DPR+ A RV NRE++ + +E E+W+ P +N
Sbjct: 268 LCEAIGLPHLPEDPRFTRNADRVANREVIIGILSRHFLEGRAEDWISRVHPRGVPIGAIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI+Q + ++ ++ I H D VG + S T E P P LGEHTD VLK
Sbjct: 328 SIAQALDEPQVKARNMLVTIPHPLQPDFVTVGSPIKLSGTPVEYLRPAPMLGEHTDEVLK 387
Query: 121 DLLNYDETTIAKLKEKKILGLIERL 145
L D+ +A+LK LG+IE+L
Sbjct: 388 RQLGLDDERLAQLKA---LGVIEQL 409
>gi|332527499|ref|ZP_08403551.1| CaiB/BaiF family protein [Rubrivivax benzoatilyticus JA2]
gi|332111906|gb|EGJ11884.1| CaiB/BaiF family protein [Rubrivivax benzoatilyticus JA2]
Length = 415
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 131/289 (45%), Positives = 190/289 (65%), Gaps = 14/289 (4%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVT-----GDECRKWGPPFL-----N 266
L+ +R+LDL+R++AGP+CT LADLGA+V+KVE+P + GD+ R WGPPFL +
Sbjct: 9 LAGLRVLDLSRVLAGPWCTQTLADLGADVVKVERPRSARHPGGDDTRGWGPPFLKDAAGH 68
Query: 267 NTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHL 326
++ + YF NRNK+SV +D P+GQ +++ LA DV++ENF G + R L + +
Sbjct: 69 DSAEAAYFVGTNRNKRSVTIDIAHPDGQALVRRLADTADVMIENFKVGDMARYGLDAQAM 128
Query: 327 SEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDG----PPCKVGIASI 382
+L+YCS+TG+G GPY+DR GYD +GGL+ +TG DG P KVG+A
Sbjct: 129 RATRPRLVYCSITGYGQSGPYQDRAGYDYAIQGLGGLMSVTGERDGLPGAGPQKVGVAVA 188
Query: 383 DLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTS 442
DL TG+YA A++AAL H+ TG+GQ ID LL TQV+ML N+GANYL +R G +
Sbjct: 189 DLFTGMYATVAILAALRHRDATGEGQAIDMALLDTQVAMLANLGANYLATKTPPRRVGNA 248
Query: 443 HANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
HAN+VP+QVF+ ++G++ + G+D Q++ C++ LA D R+ T A
Sbjct: 249 HANIVPYQVFEVADGHLILAVGNDSQFRRFCEIAGCAELATDERFATNA 297
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C++ LA D R+ T A RV NR+ L +E + +WL P +N
Sbjct: 278 FCEIAGCAELATDERFATNAARVRNRQTLIPLLEPLLHARPRADWLAALDAAGVPCGPIN 337
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ +VFADE ++ +V + H G I +V + S T P +R PP LGEHTD VL+
Sbjct: 338 DLGEVFADEQVRARGMVTQAEHPLLGTIDLVASPMKLSATPPTLRRAPPLLGEHTDEVLR 397
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ + E IA L + ++
Sbjct: 398 E-IGLTEAEIADLHARGVV 415
>gi|260555428|ref|ZP_05827649.1| formyl-CoA transferase [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|260411970|gb|EEX05267.1| formyl-CoA transferase [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|452953610|gb|EME59029.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii MSP4-16]
Length = 405
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 133/284 (46%), Positives = 189/284 (66%), Gaps = 9/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ +T+ +
Sbjct: 4 LNGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPKVGDDTRSWGPPWMKDDSGQDTQEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK SV +D P+GQ++IK L + DV++EN+ G L + L Y+ LS IN
Sbjct: 64 AYYQSTNRNKLSVAIDIANPDGQELIKALIQDTDVVIENYKAGSLKKYGLDYESLSAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TGFG GP + PGYD I +GGL+ +TG P G P KVG+A DLATG
Sbjct: 124 KLVYCSITGFGQTGPRAEEPGYDFIIQGMGGLMSVTGERDDLPGGGPQKVGVAFSDLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL+++ TG GQ ID LL Q++ + N G NYL++G KR+G +HAN+V
Sbjct: 184 LYSTIAIQAALLNRHVTGLGQYIDMALLDVQIATMANQGMNYLSSGNIPKRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P+QVFK S+ I G+D Q+ +C+ + L L D R+ A
Sbjct: 244 PYQVFKASDRDFIIACGNDTQFIQLCRSIGLPDLPNDVRFARNA 287
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 78/140 (55%), Gaps = 2/140 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + L L D R+ A R+++R+ + ++ + KT +EW+ P +N
Sbjct: 268 LCRSIGLPDLPNDVRFARNADRIKHRDEIIGILQTHFLTKTADEWVDAIYAAKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q F + + +++ E++H + +K++G + S T E +T PP LGEHT VL
Sbjct: 328 NLEQAFQEPQVIAREMLVEMNHPQREKLKVIGSPIKLSRTPVEYKTAPPLLGEHTQAVLG 387
Query: 121 DLLNYDETTIAKLKEKKILG 140
+++ ++ +A+LKEK ++G
Sbjct: 388 RIVSSEK--LAELKEKGVIG 405
>gi|225628685|ref|ZP_03786719.1| CAIB/BAIF family protein [Brucella ceti str. Cudo]
gi|225616531|gb|EEH13579.1| CAIB/BAIF family protein [Brucella ceti str. Cudo]
Length = 415
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 135/280 (48%), Positives = 182/280 (65%), Gaps = 9/280 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ R+LD++R++AGP+C +LADLGAEVIK+E+P TGD+ R WGPP++ N T +
Sbjct: 6 LTGYRVLDMSRVLAGPWCGQILADLGAEVIKIERPRTGDDTRDWGPPWMKDEQGNPTREA 65
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+Y+ NR K SV ++ +PEGQ +++ + +CDVL+EN+ G L + L Y+ LS IN
Sbjct: 66 SYYQSANRGKFSVALNIASPEGQDLLRKMVAECDVLIENYKAGSLAKYGLDYETLSAINP 125
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCSVTGFG GP PGYD I IGGL+ ITG P G P KVG+A DL TG
Sbjct: 126 GLVYCSVTGFGQTGPRAPEPGYDFIIQGIGGLMSITGERDDKPGGGPQKVGVAVADLMTG 185
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL + KTGKGQ ID LL QV+ L N NYL +G R+G +HAN+V
Sbjct: 186 LYSAIAIEAALLSRAKTGKGQHIDMALLDVQVAALCNQSQNYLASGRPPGRYGNAHANIV 245
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
P+QVF+ S+ I G+D Q+ +C + L L DPR+
Sbjct: 246 PYQVFRASDRDFIIACGNDAQFVSLCDAIGLPDLPKDPRF 285
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L L DPR+ + RV +R+ + + A + T +EW+ S P +N
Sbjct: 270 LCDAIGLPDLPKDPRFTRNSDRVIHRDEIIGILAAHFLTGTADEWIGRIHPRSVPVGAIN 329
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I++ + ++ ++ +I H D VG + S T E + P LGEHTD +L+
Sbjct: 330 DIARALDEPQVKARNMLVQIPHPLNKDFVTVGSPIKLSGTPVEYKRAAPMLGEHTDTLLQ 389
Query: 121 DLLNYDETTIAKLKEKKIL 139
L D+ + LK + I+
Sbjct: 390 QLAKLDDDRLNDLKSRGII 408
>gi|451847524|gb|EMD60831.1| hypothetical protein COCSADRAFT_174163 [Cochliobolus sativus
ND90Pr]
Length = 1110
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 128/295 (43%), Positives = 193/295 (65%), Gaps = 9/295 (3%)
Query: 207 ALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN 266
A S + LPL+ +++LD+TR++AGP+CT +L DLGA+VIK+E P GD+ R WGPP+
Sbjct: 37 AASGDGSDLPLAGIKVLDMTRVLAGPYCTQILGDLGADVIKIEHPTRGDDTRAWGPPYAK 96
Query: 267 NTEL------STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLN 320
T+ S Y+ VNRNK+S+ + F+ P G I+ L K+CDVLVEN++PG L +
Sbjct: 97 YTDEQEGPGESAYYLGVNRNKRSMGLSFQHPAGVDILHRLVKECDVLVENYLPGSLAKYA 156
Query: 321 LGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIA 380
+ Y +S+IN ++Y S+TG+G GPY++R GYD++ + GL+HITG DGPP KVG+A
Sbjct: 157 MDYDTVSKINPNIVYASITGYGQTGPYRNRAGYDVMVEAEMGLMHITGTRDGPPVKVGVA 216
Query: 381 SIDLATGLYAHGAVMAALLHKYKT--GKGQKIDCNLLSTQVSMLINVGANYLNAG-IEGK 437
DL TGLY +++AAL ++++ GQ ID L QV+ L N+ ++ L +G +
Sbjct: 217 VTDLTTGLYTSNSIIAALFRRFRSPGSGGQHIDVALSDCQVATLANIASSCLISGQRDSG 276
Query: 438 RWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
RWGTSH ++VP++ FKT++G + +G G+DK Y +C + D ++ T AL
Sbjct: 277 RWGTSHPSIVPYKAFKTADGDILLGGGNDKLYGTLCNRLGKPEWITDEKFKTNAL 331
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 80/140 (57%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + D ++ T ALRV++R+ L + IEA+T +K+T+E L IF+G PYA +N
Sbjct: 311 LCNRLGKPEWITDEKFKTNALRVKHRDELEELIEAETRKKSTQELLDIFEGSGMPYAAIN 370
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ EH+ +VKE+ H G IK+V V +S + P +R PPP LG+HT+ +L
Sbjct: 371 DVQDTLNHEHVLARNMVKEVEHPACGPIKLVNTPVKWSQSTPGIRLPPPLLGQHTNEILS 430
Query: 121 DLLNYDETTIAKLKEKKILG 140
D L + + L+ + ++
Sbjct: 431 DTLGMSKEDVEALRSEGVVA 450
>gi|421900283|ref|ZP_16330646.1| acyl-coa transferases/carnitine dehydratase protein [Ralstonia
solanacearum MolK2]
gi|206591489|emb|CAQ57101.1| acyl-coa transferases/carnitine dehydratase protein [Ralstonia
solanacearum MolK2]
Length = 406
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 134/282 (47%), Positives = 187/282 (66%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDLTR++AGP+C LAD GA+VIKVE+P GD+ R WGPP+L N+T +
Sbjct: 4 LSHLRVLDLTRVLAGPWCAQNLADFGADVIKVERPGAGDDTRAWGPPWLKDGAGNDTAEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+S+ VD TPEGQ+I++ LA DV++EN+ G+L + L Y+ L +
Sbjct: 64 AYYLAANRNKRSITVDISTPEGQEIVRRLAAHSDVVLENYKVGQLKKYGLDYEALKAVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCS+TGFG GPY R GYD I +GG + +TG P G P K G+A DL TG
Sbjct: 124 DLVYCSITGFGQTGPYAARAGYDFIVQGMGGFMSLTGERDDLPGGGPQKAGVAISDLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA AV+AAL H+ +TG+GQ ID LL QV+ML N+ NYL +G +RWG +H N+V
Sbjct: 184 MYATVAVLAALAHRDRTGEGQYIDMALLDVQVAMLANMNTNYLASGQAPRRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+T++G++ + G+D Q++ L LA DPR+ T
Sbjct: 244 PYQTFQTADGWIIVAVGNDGQFRRFVDAGGLPGLADDPRFAT 285
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 68/134 (50%)
Query: 6 NLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQV 65
L LA DPR+ T RV NR++L + EW+ + P +N++ +V
Sbjct: 273 GLPGLADDPRFATNPQRVANRDVLVPILAGMVRRLDKAEWIERLEAAGVPCGPINTLDEV 332
Query: 66 FADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNY 125
F +E ++ L ++ H G + +VG V S T P PP LGEHT+ VL+D+L+
Sbjct: 333 FDNEQVRARGLRVDLPHPSAGAVPLVGSPVRMSATPPRAVAHPPLLGEHTEAVLRDVLDL 392
Query: 126 DETTIAKLKEKKIL 139
+T I L+ + ++
Sbjct: 393 PQTRIDALRAQGVI 406
>gi|421674290|ref|ZP_16114222.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC065]
gi|421693224|ref|ZP_16132867.1| CoA-transferase family III protein [Acinetobacter baumannii IS-116]
gi|404558373|gb|EKA63656.1| CoA-transferase family III protein [Acinetobacter baumannii IS-116]
gi|410384520|gb|EKP37028.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC065]
Length = 405
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 133/284 (46%), Positives = 189/284 (66%), Gaps = 9/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ +T+ +
Sbjct: 4 LNGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPKVGDDTRSWGPPWMKDDSGQDTQEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK SV +D + EGQ++IK L + DV++EN+ G L + L Y+ LS IN
Sbjct: 64 AYYQSTNRNKLSVAIDIASSEGQELIKALIQDTDVVIENYKAGSLKKYGLDYESLSAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TGFG GP + PGYD I +GGL+ +TG P G P KVG+A DLATG
Sbjct: 124 KLVYCSITGFGQNGPRAEEPGYDFIIQGMGGLMSVTGERDDLPGGGPQKVGVAFSDLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL+++ TG GQ ID LL Q++ + N G NYL++G KR+G +HAN+V
Sbjct: 184 LYSTIAIQAALLNRHVTGLGQYIDMALLDVQIATMANQGMNYLSSGNIPKRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P+QVFK S+ I G+D Q+ +C+ + L L D R+ A
Sbjct: 244 PYQVFKASDRDFIIACGNDTQFIQLCRSIGLPDLPNDARFARNA 287
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 78/140 (55%), Gaps = 2/140 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + L L D R+ A R+++R+ + ++ + KT +EW+ P +N
Sbjct: 268 LCRSIGLPDLPNDARFARNADRIKHRDEIIGILQTHFLTKTADEWVDAIYAAKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q F + + +++ E++H + +K++G + S T E +T PP LGEHT VL
Sbjct: 328 NLEQAFQEPQVIAREMLVEMNHPQREKLKVIGSPIKLSRTPVEYKTAPPLLGEHTQAVLG 387
Query: 121 DLLNYDETTIAKLKEKKILG 140
+++ ++ +A+LKEK ++G
Sbjct: 388 RVVSSEK--LAELKEKGVIG 405
>gi|395764195|ref|ZP_10444864.1| L-carnitine dehydratase/bile acid-inducible protein F
[Janthinobacterium lividum PAMC 25724]
Length = 415
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 140/304 (46%), Positives = 190/304 (62%), Gaps = 9/304 (2%)
Query: 207 ALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL- 265
AL+S PL+ +R+LDL+R++AGP+ LLADLGA+V+KVEQP GD+ R WGPP+L
Sbjct: 3 ALASTLRPAPLTGLRVLDLSRVLAGPWAGQLLADLGADVVKVEQPGRGDDTRSWGPPYLK 62
Query: 266 ----NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNL 321
+T + YF C NRNK+S+C+D PEGQ +++ LA + DVL+ENF L + L
Sbjct: 63 DEDGRDTAEAAYFQCANRNKRSLCIDLAAPEGQALVRKLAGEADVLLENFKLDGLKQYGL 122
Query: 322 GYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPC----KV 377
L +N +L+YCS+TGFG GPY R GYD + +GGL+ ITG PDG P KV
Sbjct: 123 DAASLMALNPRLVYCSITGFGQDGPYAARAGYDFLIQGMGGLMSITGLPDGQPGAGPQKV 182
Query: 378 GIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGK 437
G+A D+ TGLYA AV AAL + ++G GQ ID LL QV+ L N ANYL G +
Sbjct: 183 GVAQTDIMTGLYATIAVQAALAERQRSGLGQHIDLALLDVQVAALGNQAANYLCGGKVPQ 242
Query: 438 RWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMT 497
R G +H N+VP+Q F T++G + + G+D Q+ C ++ ALD RY T +A
Sbjct: 243 RMGNAHPNIVPYQDFPTADGDMILAIGNDGQFSRFCAIVGHPEWALDERYATNPQRVAHR 302
Query: 498 SHLI 501
+ LI
Sbjct: 303 ATLI 306
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 70/139 (50%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C ++ ALD RY T RV +R L + T+ +TT EW+ F+ + P VN
Sbjct: 277 FCAIVGHPEWALDERYATNPQRVAHRATLIPLLRQATVMRTTAEWISAFEAQAVPCGPVN 336
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I QVFAD + L ++ H G + +V V S + + R PPP LG+HT VL
Sbjct: 337 RIDQVFADPQVLARGLKVQMPHPTAGTVALVANPVRLSGSPVQYRLPPPLLGQHTQEVLH 396
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ L D I L+E+K++
Sbjct: 397 EWLGLDGCQIDGLRERKVV 415
>gi|152988325|ref|YP_001345943.1| hypothetical protein PSPA7_0548 [Pseudomonas aeruginosa PA7]
gi|150963483|gb|ABR85508.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
Length = 407
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 133/282 (47%), Positives = 187/282 (66%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIK+E+P +GD+ R WGPPFL N+T +
Sbjct: 5 LSHIRVLDLSRVLAGPWAGQILADLGAEVIKIERPGSGDDTRAWGPPFLKDAEGNDTGEA 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNKKSV VDF PEGQ+I+++LA + D+L+ENF G L L Y+ L ++N
Sbjct: 65 AYYLSANRNKKSVTVDFTQPEGQRIVRELAAKADILLENFKVGGLKAYGLDYESLKQVNP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG D P KVG+A D+ TG
Sbjct: 125 KLIYCSITGFGQSGPYAKRAGYDFMIQGLGGLMSLTGRADNEEGAGPVKVGVALTDILTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ AV+AAL H+ +G GQ ID LL QV+ L N NYL G+ +R G +H N+V
Sbjct: 185 LYSSTAVLAALAHRDVSGIGQHIDMALLDVQVACLANQTLNYLTTGVPPRRLGNAHPNIV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F T++G + + G+D Q++ ++ + A DPR+ T
Sbjct: 245 PYQDFPTADGDMILTVGNDSQFRKFAELADHPEWADDPRFAT 286
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 70/129 (54%)
Query: 11 ALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEH 70
A DPR+ T RV NRE+L I T+ +T EW+L + P +N ++QVFAD
Sbjct: 279 ADDPRFATNKARVANREVLIPLIRQATVLHSTAEWILSLERAGVPCGPINDLAQVFADPQ 338
Query: 71 IQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETTI 130
+Q L E+ H G + V + S T E R PPP LG+HTD VL+ LL D +
Sbjct: 339 VQARGLRVELPHPLGGTVPQVASPIRLSETPVEYRNPPPTLGQHTDDVLETLLGLDAAAL 398
Query: 131 AKLKEKKIL 139
+L++ K++
Sbjct: 399 ERLRDGKVI 407
>gi|423689203|ref|ZP_17663723.1| CoA-transferase, family III [Pseudomonas fluorescens SS101]
gi|387998842|gb|EIK60171.1| CoA-transferase, family III [Pseudomonas fluorescens SS101]
Length = 406
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 188/294 (63%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIKVE+P +GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWSGQILADLGAEVIKVERPGSGDDTRAWGPPFLKDADGENTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ++++DLA + D+L+ENF G L L Y+ L E+N
Sbjct: 64 AYYLSANRNKESVTIDFTRPEGQKLVRDLAAKSDILIENFKVGGLAAYGLDYESLKEVNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 ELIYCSITGFGQTGPYAMRAGYDFMIQGLGGLMSLTGRPEGDEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ G GQ ID LL QV+ L N NYL G KR G +H N+V
Sbjct: 184 LYSTVAILAALAHRDHDGGGQHIDMALLDVQVACLANQAMNYLTTGTPPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A D R+ T +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAEVAGQPQWADDVRFATNRARVANRTELI 297
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 67/139 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A D R+ T RV NR L I T+ KTT EW+ + V P +N
Sbjct: 268 FAEVAGQPQWADDVRFATNRARVANRTELIPLIRQATVFKTTAEWVSQLEQVGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVF+D +Q L E+ H G + V + S T E R+ PP LGEHT VL+
Sbjct: 328 DLAQVFSDPQVQARGLAIELPHALAGTVPQVASPIRLSKTPVEYRSAPPLLGEHTLEVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L +A LKE ++
Sbjct: 388 GVLGLGAAHVAALKEAGVI 406
>gi|398874226|ref|ZP_10629450.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM74]
gi|398195977|gb|EJM82997.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM74]
Length = 406
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 138/294 (46%), Positives = 187/294 (63%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWAGQILADLGAEVIKVERPGNGDDTRAWGPPFLKDAYGENTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++++LA + D+L+ENF G L L Y+ L IN
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQKLVRELAAKSDILIENFKVGGLAAYGLDYESLKAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 DLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPEGEEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ G GQ ID LL QV+ L N NYL G KR G +H N+V
Sbjct: 184 LYSTVAILAALAHRDHDGGGQHIDMALLDVQVACLANQAMNYLTTGNAPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ T L +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAEVAGQPQWADDPRFATNKLRVANRAVLI 297
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 67/139 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ T LRV NR +L I T+ KTT EW+ + P +N
Sbjct: 268 FAEVAGQPQWADDPRFATNKLRVANRAVLIPLIRQATVFKTTAEWVAQLEQAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++Q+FAD ++ L E+ H G + V + S T E R PP LGEHT VL+
Sbjct: 328 DVAQMFADPQVKARGLAIELPHALAGMVPQVASPIRLSETPVEYRFAPPLLGEHTLEVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L D ++ K +L
Sbjct: 388 RVLGLDAGAVSAFKASGVL 406
>gi|398920219|ref|ZP_10659136.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM49]
gi|398168228|gb|EJM56249.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM49]
Length = 406
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 138/294 (46%), Positives = 187/294 (63%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWAGQILADLGAEVIKVERPGNGDDTRAWGPPFLKDAYGENTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++++LA + D+L+ENF G L L Y+ L IN
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQKLVRELAAKSDILIENFKVGGLAAYGLDYESLKAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 DLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPEGEEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ G GQ ID LL QV+ L N NYL G KR G +H N+V
Sbjct: 184 LYSTVAILAALAHRDHDGGGQHIDMALLDVQVACLANQAMNYLTTGNAPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ T L +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAEVAGQPQWADDPRFATNKLRVANRAVLI 297
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 66/139 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ T LRV NR +L I T+ KTT EW+ + P +N
Sbjct: 268 FAEVAGQPQWADDPRFATNKLRVANRAVLIPLIRQATVFKTTAEWVAQLEQAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++Q+FAD ++ L E+ H G + V + S T E R PP LGEHT VL+
Sbjct: 328 DVAQMFADPQVKARGLAIELPHALAGMVPQVASPIRLSETPVEYRFAPPLLGEHTLEVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L D + K +L
Sbjct: 388 RVLGLDAGAVTAFKASGVL 406
>gi|298294067|ref|YP_003696006.1| L-carnitine dehydratase/bile acid-inducible protein F [Starkeya
novella DSM 506]
gi|296930578|gb|ADH91387.1| L-carnitine dehydratase/bile acid-inducible protein F [Starkeya
novella DSM 506]
Length = 412
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 128/290 (44%), Positives = 188/290 (64%), Gaps = 5/290 (1%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ +R+LDL+R++AGP+ T +L DLGAEVIK+E+P GD+ R WGPP+L N T S
Sbjct: 14 LTGIRVLDLSRVLAGPWATQILGDLGAEVIKIEKPGAGDDTRGWGPPWLEDGEGNATRES 73
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF C NR+K+SV +D PEGQ +I+ LA Q DV++ENF G L R L ++ L+ +N
Sbjct: 74 AYFLCANRSKRSVTIDMAQPEGQALIRRLAAQSDVVIENFKVGGLKRYGLDHESLAALNP 133
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+L+YCS+TGFG GP R GYD + + GL+ +TG P+ P K+G+A +D+ TGL A
Sbjct: 134 RLVYCSITGFGQDGPEAGRAGYDFMIQGMSGLMSVTGSPEAEPQKIGVALVDVLTGLNAA 193
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
AV+AAL + +TG+GQ ID L ++ L N N+L G +R G +H N+VP+Q
Sbjct: 194 IAVLAALQQRERTGRGQHIDVALFDVAMASLANQALNFLVGGTAPRRLGNAHPNIVPYQA 253
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
F+T++G++ + G+D Q+ C++ +L +A D R+ T A +A LI
Sbjct: 254 FETADGHLILAVGNDAQFARFCRIADLPDIAGDARFATNAGRVAERDLLI 303
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 66/143 (46%), Gaps = 8/143 (5%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C++ +L +A D R+ T A RV R+LL + A +TT EWL + P +N
Sbjct: 274 FCRIADLPDIAGDARFATNAGRVAERDLLIPIVAAALKRQTTGEWLAMLDAAGIPAGPIN 333
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAV--AYSLTQPEVRTP--PPALGEHTD 116
+I+Q FA+ L + H G + P V L+ + P PP LG+ T+
Sbjct: 334 TIAQAFAEPQAIARGLAMNLPHALGG----LAPGVRSPLRLSDSPIGGPLAPPTLGQDTE 389
Query: 117 YVLKDLLNYDETTIAKLKEKKIL 139
+VL+ +L +L+ I+
Sbjct: 390 FVLESVLGLSAQERDRLRGAGII 412
>gi|261220075|ref|ZP_05934356.1| L-carnitine dehydrogenase [Brucella ceti B1/94]
gi|261756392|ref|ZP_06000101.1| CAIB/BAIF family protein [Brucella sp. F5/99]
gi|265996577|ref|ZP_06109134.1| L-carnitine dehydrogenase [Brucella ceti M490/95/1]
gi|260918659|gb|EEX85312.1| L-carnitine dehydrogenase [Brucella ceti B1/94]
gi|261736376|gb|EEY24372.1| CAIB/BAIF family protein [Brucella sp. F5/99]
gi|262550874|gb|EEZ07035.1| L-carnitine dehydrogenase [Brucella ceti M490/95/1]
Length = 413
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 135/280 (48%), Positives = 182/280 (65%), Gaps = 9/280 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ R+LD++R++AGP+C +LADLGAEVIK+E+P TGD+ R WGPP++ N T +
Sbjct: 4 LTGYRVLDMSRVLAGPWCGQILADLGAEVIKIERPRTGDDTRDWGPPWMKDEQGNPTREA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+Y+ NR K SV ++ +PEGQ +++ + +CDVL+EN+ G L + L Y+ LS IN
Sbjct: 64 SYYQSANRGKFSVALNIASPEGQDLLRKMVAECDVLIENYKAGSLAKYGLDYETLSAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCSVTGFG GP PGYD I IGGL+ ITG P G P KVG+A DL TG
Sbjct: 124 GLVYCSVTGFGQTGPRAPEPGYDFIIQGIGGLMSITGERDDKPGGGPQKVGVAVADLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL + KTGKGQ ID LL QV+ L N NYL +G R+G +HAN+V
Sbjct: 184 LYSAIAIEAALLSRAKTGKGQHIDMALLDVQVAALCNQSQNYLASGRPPGRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
P+QVF+ S+ I G+D Q+ +C + L L DPR+
Sbjct: 244 PYQVFRASDRDFIIACGNDAQFVSLCDAIGLPDLPKDPRF 283
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L L DPR+ + RV +R+ + + A + T +EW+ S P +N
Sbjct: 268 LCDAIGLPDLPKDPRFTRNSDRVIHRDEIIGILAAHFLTGTADEWIGRIHPRSVPVGAIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I++ + ++ ++ +I H D VG + S T E + P LGEHTD +L+
Sbjct: 328 DIARALDEPQVKARNMLVQIPHPLNKDFVTVGSPIKLSGTPVEYKRAAPMLGEHTDTLLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
L D+ + LK + I+
Sbjct: 388 QLAKLDDDRLNDLKSRGII 406
>gi|333916084|ref|YP_004489816.1| fomryl-CoA transferase [Delftia sp. Cs1-4]
gi|333746284|gb|AEF91461.1| Formyl-CoA transferase [Delftia sp. Cs1-4]
Length = 415
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 135/290 (46%), Positives = 187/290 (64%), Gaps = 9/290 (3%)
Query: 209 SSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL--- 265
S+ + L+ +++LDL+R++AGP+CT LADLGA+VIKVE+PV GD+ R WGPPFL
Sbjct: 3 STSSAPAALAGIKVLDLSRVLAGPWCTQTLADLGADVIKVERPVAGDDTRHWGPPFLPRD 62
Query: 266 --NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGY 323
T+ ++YFT NRNK+SV +D TP+GQQ+I+ +A DVLVENF G L + L Y
Sbjct: 63 DGQATQEASYFTACNRNKRSVTIDMSTPDGQQLIRQMAAGADVLVENFKVGGLAQYGLDY 122
Query: 324 KHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGI 379
+ L +N +LIYCSVTGFG GPY +R GYD++ ++ GL+ ITGH P G P KVG+
Sbjct: 123 ESLKALNPRLIYCSVTGFGQTGPYAERAGYDLMVQAMCGLMSITGHADEAPGGGPLKVGV 182
Query: 380 ASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRW 439
A ID+ TGLYA A++AAL + +G+GQ ID LL +++L N A +L G R
Sbjct: 183 AVIDVFTGLYASNAILAALHARQASGRGQHIDMALLDVGMAVLANQAAGFLATGESPGRA 242
Query: 440 GTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
G H ++ P+Q F T+NG V + G+D Q+ C + A D R+ T
Sbjct: 243 GNIHPSLAPYQDFATANGNVLLAIGNDGQFARFCAAVGEAGWAQDERFAT 292
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C + A D R+ T RV NR+ L + + + T EW+ + + + P +N
Sbjct: 275 FCAAVGEAGWAQDERFATNTARVRNRQALLERMVPLMKTRGTAEWIALLEDKAVPCGPIN 334
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDI-KIVGPAVAYSL--TQPEVRTPPPALGEHTDY 117
+I+Q F D ++ + E+ E I +I G A L T P +R+ PP+LG+HTD
Sbjct: 335 TIAQAFDDPQVRARGIRVELPREAGDGISRIAGVASPMRLSDTPPVLRSAPPSLGQHTDE 394
Query: 118 VLKDLLNYDETTIAKLKEKKIL 139
VL + L I L+ + ++
Sbjct: 395 VLGE-LGIAPMAIQALRSRGVV 415
>gi|73541363|ref|YP_295883.1| L-carnitine dehydratase/bile acid-inducible protein F [Ralstonia
eutropha JMP134]
gi|72118776|gb|AAZ61039.1| L-carnitine dehydratase/bile acid-inducible protein F [Ralstonia
eutropha JMP134]
Length = 406
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 137/282 (48%), Positives = 184/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
L ++R+LDLTR++AGP+ T LAD+GA+VIK+E+P GD+ R WGPPFL + T S
Sbjct: 5 LGHLRVLDLTRVLAGPWATQNLADMGADVIKIERPGAGDDTRAWGPPFLRDAQGEETRDS 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+YF NR K+SV VD TP GQ II+DLA++ DV+VEN+ G L R LGY+ L IN
Sbjct: 65 SYFLSANRGKRSVTVDIATPAGQVIIRDLAREADVVVENYKVGTLARYGLGYEDLRAINP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+L+YCS+TGFG GPY PGYD + +GGL+ ITG PDG P K GIA DL TG
Sbjct: 125 RLVYCSITGFGQSGPYASLPGYDFVFQGMGGLMSITGMPDGEPGGGPVKSGIAITDLLTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA A++AAL H++ +G GQ ID LL V++ NY +G +R G +H+N+V
Sbjct: 185 MYATTAILAALEHRHVSGVGQYIDMALLDCVVTINSYQAINYFLSGKIPQRMGNAHSNMV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+QVF+ G V + G+D QY+ +CKV+ L D R+ T
Sbjct: 245 PYQVFRCKEGDVIVAVGNDGQYRALCKVIGRHDLGEDERFAT 286
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 66/139 (47%), Gaps = 1/139 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CKV+ L D R+ T R NRE+L ++ + +T EW+ + + + P +
Sbjct: 269 LCKVIGRHDLGEDERFATAGNRNRNREVLIPQVAEAMLARTMTEWVELLEAANVPCGPIY 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ QVF D ++ ++ + H + + S T P LGEHTD VL
Sbjct: 329 NMQQVFEDPQVRHREMQLSLPHSAGVSAPGLANPIRLSDTPVTYERSAPTLGEHTDAVLG 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ L YD IA L+++ +L
Sbjct: 389 E-LGYDAARIAALRKEGVL 406
>gi|398891482|ref|ZP_10644858.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM55]
gi|398187163|gb|EJM74517.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM55]
Length = 406
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 138/294 (46%), Positives = 187/294 (63%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWAGQILADLGAEVIKVERPGNGDDTRAWGPPFLKDAYGENTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++++LA + D+L+ENF G L L Y+ L IN
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQKLVRELAAKSDILIENFKVGGLAAYGLDYESLKAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 DLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPEGEEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ G GQ ID LL QV+ L N NYL G KR G +H N+V
Sbjct: 184 LYSTVAILAALAHRDHDGGGQHIDMALLDVQVACLANQAMNYLTTGNAPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ T L +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAEVAGQPQWADDPRFATNKLRVANRAVLI 297
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 68/139 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ T LRV NR +L I T+ KTT EW+ + P +N
Sbjct: 268 FAEVAGQPQWADDPRFATNKLRVANRAVLIPLIRQATVFKTTAEWVAQLEQAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++Q+FAD ++ L E+ H G + V + S T E R PP LGEHT VL+
Sbjct: 328 DLAQMFADPQVKARGLAIELPHALAGMVPQVASPIRLSETPVEYRYAPPLLGEHTLEVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L D T++ K +L
Sbjct: 388 RVLGLDAGTVSAFKASGVL 406
>gi|406040797|ref|ZP_11048152.1| L-carnitine dehydrogenase [Acinetobacter ursingii DSM 16037 = CIP
107286]
Length = 415
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 137/290 (47%), Positives = 184/290 (63%), Gaps = 5/290 (1%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
L+ + +LDL+R++AGP+C +LADLGAEVIKVE+P GD+ R WGPP++ N T+ +
Sbjct: 4 LTGLTVLDLSRVLAGPWCGQILADLGAEVIKVERPKVGDDTRMWGPPWMLNDQGRPTKEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK SV +D T EGQQ+I+++ K DVL+EN+ G L + L Y LS+IN
Sbjct: 64 GYYQAANRNKYSVAIDIATEEGQQLIQEMIKDADVLIENYKAGSLAKYGLDYATLSQINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
QL+YCS+TGFG GP + PGYD + + GL+ ITG + P KVG+A D+ TGLYA
Sbjct: 124 QLVYCSITGFGQTGPRAEEPGYDFVIQGMSGLMSITGEQNQEPQKVGVAVADIQTGLYAT 183
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A+ AAL + TGKGQ ID LL QV+ L N G N+L G R G SH N+VP+QV
Sbjct: 184 VAIQAALWSRLSTGKGQHIDLALLDVQVATLANQGMNFLTTGKSPVRMGNSHPNIVPYQV 243
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
FK + I G+DKQ++D+C ++ L P YLT +A LI
Sbjct: 244 FKAKDKDFIIACGNDKQFKDLCIAIDRADLLGQPNYLTNKDRVAHRHELI 293
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 2/139 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ L P YLT RV +R L + + W+ P +N
Sbjct: 264 LCIAIDRADLLGQPNYLTNKDRVAHRHELIGVLSEHFQTQDANHWVAQIHAKKVPVGMIN 323
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI + + I ++V I H + K++ + S T E PP LGEHT +LK
Sbjct: 324 SIEEALNEPQILARQMVVNIPHPQNQRFKVIASPIKLSGTPVEYHHAPPQLGEHTYKILK 383
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ D+ + + EK I+
Sbjct: 384 RYKSNDQ--LNQFNEKGII 400
>gi|398934186|ref|ZP_10666201.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM48]
gi|398159301|gb|EJM47610.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM48]
Length = 406
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 138/294 (46%), Positives = 187/294 (63%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWAGQILADLGAEVIKVERPGNGDDTRAWGPPFLKDAYGENTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++++LA + D+L+ENF G L L Y+ L IN
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQKLVRELAAKSDILIENFKVGGLAAYGLDYESLKAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 DLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPEGEEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ G GQ ID LL QV+ L N NYL G KR G +H N+V
Sbjct: 184 LYSTVAILAALAHRDHDGGGQHIDMALLDVQVACLANQAMNYLTTGNAPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ T L +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAEVAGQPQWADDPRFATNKLRVANRAVLI 297
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 67/139 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ T LRV NR +L I T+ KTT EW+ + + P +N
Sbjct: 268 FAEVAGQPQWADDPRFATNKLRVANRAVLIPLIRQATVFKTTAEWVALLEQAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++Q+FAD ++ L E+ H G + V + S T E R PP LGEHT VL+
Sbjct: 328 DLAQMFADPQVKARGLAIELPHALAGMVPQVASPIRLSETPVEYRFAPPLLGEHTLEVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L D + K +L
Sbjct: 388 RVLGLDAGAVTAFKASGVL 406
>gi|116696468|ref|YP_842044.1| acyl-CoA transferase/carnitine dehydratase [Ralstonia eutropha H16]
gi|113530967|emb|CAJ97314.1| predicted acyl-CoA transferase/carnitine dehydratase [Ralstonia
eutropha H16]
Length = 387
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 134/284 (47%), Positives = 180/284 (63%), Gaps = 11/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE------- 269
L VR+LDL+RI+AGP+CT LADLGAEV KVE P GD+ R WGPP+L E
Sbjct: 6 LEGVRVLDLSRILAGPWCTQNLADLGAEVTKVEHPERGDDTRGWGPPYLEAPEGSGDTRR 65
Query: 270 LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEI 329
LS YF C NR K+SV +D+ TPEG +++LA++ DVLVEN+ G L R L Y L +
Sbjct: 66 LSGYFICCNRGKRSVAIDYGTPEGAAQVRELAREADVLVENYKVGTLRRYGLDYDTLKAL 125
Query: 330 NSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLA 385
N +L+Y S+TGFG GP D+PGYD + +GGL+ TG PDG P + G+A +DL+
Sbjct: 126 NPRLVYLSITGFGQSGPMADKPGYDYVFQGMGGLMSYTGQPDGTPGAGPLRTGVAVVDLS 185
Query: 386 TGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHAN 445
TG+YA AV+AAL + TG G +D LL V+M N ANYL +G +R G +H N
Sbjct: 186 TGMYATSAVLAALYQRQATGLGAHLDIALLDVAVAMNANQAANYLVSGQNPQRSGNAHPN 245
Query: 446 VVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P++VF+ ++G++ + G+D Q+ C V + LA DPRY T
Sbjct: 246 CAPYEVFRCADGHLILAIGNDSQFARFCAVAGMPDLAQDPRYAT 289
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 42/91 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C V + LA DPRY T + R+E+ L + +T W F P+ ++
Sbjct: 272 FCAVAGMPDLAQDPRYATNSARIEHLPALRALLTDLFPTRTRAAWTDAFDAAGVPWGPIH 331
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIV 91
++++VFA +Q L++ H G + +V
Sbjct: 332 TMAEVFAHPQVQHRGLMQMAEHPVMGRVPMV 362
>gi|398868463|ref|ZP_10623862.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM78]
gi|398233433|gb|EJN19367.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM78]
Length = 406
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 138/294 (46%), Positives = 187/294 (63%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWSGQILADLGAEVIKVERPGNGDDTRAWGPPFLKDAYGENTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++++LA + D+L+ENF G L L Y+ L IN
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQKLVRELASKSDILIENFKVGGLAAYGLDYESLKAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 DLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPEGEEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ G GQ ID LL QV+ L N NYL G KR G +H N+V
Sbjct: 184 LYSTVAILAALAHRDHDGGGQHIDMALLDVQVACLANQAMNYLTTGNAPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ T L +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFSEVAGQPQWADDPRFATNKLRVANRAVLI 297
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 67/139 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ T LRV NR +L I T+ KTT EW+ + P +N
Sbjct: 268 FSEVAGQPQWADDPRFATNKLRVANRAVLIPLIRQATVFKTTAEWVAQLEQAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++Q+F D ++ L E+ H G + V + S T E R PP LGEHT VL+
Sbjct: 328 DLAQMFEDPQVKARGLAIELPHALAGSVPQVASPIRLSETPVEYRYAPPLLGEHTLEVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L D ++ LK +L
Sbjct: 388 RVLGLDAGAVSVLKTSGVL 406
>gi|417547596|ref|ZP_12198678.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-18]
gi|417564957|ref|ZP_12215831.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC143]
gi|395556713|gb|EJG22714.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC143]
gi|400389345|gb|EJP52416.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-18]
Length = 405
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 133/284 (46%), Positives = 189/284 (66%), Gaps = 9/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ +T+ +
Sbjct: 4 LNGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPKVGDDTRSWGPPWMKDDSGQDTQEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK SV +D + EGQ++IK L + DV++EN+ G L + L Y+ LS IN
Sbjct: 64 AYYQSTNRNKLSVAIDIASSEGQELIKALIQDTDVVIENYKAGSLKKYGLDYESLSAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TGFG GP + PGYD I +GGL+ +TG P G P KVG+A DLATG
Sbjct: 124 KLVYCSITGFGQTGPRAEEPGYDFIIQGMGGLMSVTGERDDLPGGGPQKVGVAFSDLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL+++ TG GQ ID LL Q++ + N G NYL++G KR+G +HAN+V
Sbjct: 184 LYSTIAIQAALLNRHVTGLGQYIDMALLDVQIATMANQGMNYLSSGNIPKRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P+QVFK S+ I G+D Q+ +C+ + L L D R+ A
Sbjct: 244 PYQVFKASDRDFIIACGNDTQFIQLCRSIGLPDLPNDSRFARNA 287
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 78/140 (55%), Gaps = 2/140 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + L L D R+ A R+++R+ + ++ + KT +EW+ P +N
Sbjct: 268 LCRSIGLPDLPNDSRFARNADRIKHRDEIIGILQTHFLTKTADEWVDAIYAAKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q F + + +++ E++H + +K++G + S T E +T PP LGEHT VL
Sbjct: 328 NLEQAFQEPQVIAREMLVEMNHPQREKLKVIGSPIKLSRTPVEYKTAPPLLGEHTQAVLG 387
Query: 121 DLLNYDETTIAKLKEKKILG 140
+++ ++ +A+LKEK ++G
Sbjct: 388 RVVSSEK--LAELKEKGVIG 405
>gi|23499983|ref|NP_699423.1| CAIB/BAIF family protein [Brucella suis 1330]
gi|148558519|ref|YP_001257272.1| CAIB/BAIF family protein [Brucella ovis ATCC 25840]
gi|256015010|ref|YP_003105019.1| CAIB/BAIF family protein [Brucella microti CCM 4915]
gi|261749970|ref|ZP_05993679.1| L-carnitine dehydrogenase [Brucella suis bv. 5 str. 513]
gi|261753223|ref|ZP_05996932.1| L-carnitine dehydrogenase [Brucella suis bv. 3 str. 686]
gi|376278205|ref|YP_005108238.1| CAIB/BAIF family protein [Brucella suis VBI22]
gi|384222767|ref|YP_005613932.1| CAIB/BAIF family protein [Brucella suis 1330]
gi|23463566|gb|AAN33428.1| CAIB/BAIF family protein [Brucella suis 1330]
gi|148369804|gb|ABQ62676.1| CAIB/BAIF family protein [Brucella ovis ATCC 25840]
gi|255997670|gb|ACU49357.1| CAIB/BAIF family protein [Brucella microti CCM 4915]
gi|261739723|gb|EEY27649.1| L-carnitine dehydrogenase [Brucella suis bv. 5 str. 513]
gi|261742976|gb|EEY30902.1| L-carnitine dehydrogenase [Brucella suis bv. 3 str. 686]
gi|343384215|gb|AEM19706.1| CAIB/BAIF family protein [Brucella suis 1330]
gi|358259643|gb|AEU07376.1| CAIB/BAIF family protein [Brucella suis VBI22]
Length = 413
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 135/280 (48%), Positives = 182/280 (65%), Gaps = 9/280 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ R+LD++R++AGP+C +LADLGAEVIK+E+P TGD+ R WGPP++ N T +
Sbjct: 4 LTGYRVLDMSRVLAGPWCGQILADLGAEVIKIERPRTGDDTRDWGPPWMKDEQGNPTREA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+Y+ NR K SV ++ +PEGQ +++ + +CDVL+EN+ G L + L Y+ LS IN
Sbjct: 64 SYYQSANRGKFSVALNIASPEGQDLLRKMVAECDVLIENYKAGSLAKYGLDYETLSAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCSVTGFG GP PGYD I IGGL+ ITG P G P KVG+A DL TG
Sbjct: 124 GLVYCSVTGFGQTGPRAPEPGYDFIIQGIGGLMSITGERDDKPGGGPQKVGVAVADLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL + KTGKGQ ID LL QV+ L N NYL +G R+G +HAN+V
Sbjct: 184 LYSAIAIEAALLSRAKTGKGQHIDMALLDVQVAALCNQSQNYLASGRPPGRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
P+QVF+ S+ I G+D Q+ +C + L L DPR+
Sbjct: 244 PYQVFRASDRDFIIACGNDAQFVSLCDAIGLPDLPKDPRF 283
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L L DPR+ + RV +R+ + + A + T +EW+ P +N
Sbjct: 268 LCDAIGLPDLPKDPRFTRNSDRVIHRDEIIGILAAHFLTGTADEWIGRIHPRGVPVGAIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I++ + ++ ++ +I H D VG + S T E + P LGEHTD +L+
Sbjct: 328 DIARALDEPQVKARNMLVQIPHPLNKDFVTVGSPIKLSGTPVEYKRAAPMLGEHTDTLLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
L D+ + LK + I+
Sbjct: 388 QLAKLDDDRLNDLKSRGII 406
>gi|225686075|ref|YP_002734047.1| L-carnitine dehydrogenase [Brucella melitensis ATCC 23457]
gi|265993323|ref|ZP_06105880.1| L-carnitine dehydrogenase [Brucella melitensis bv. 3 str. Ether]
gi|384212756|ref|YP_005601839.1| L-carnitine dehydrogenase [Brucella melitensis M5-90]
gi|384409856|ref|YP_005598476.1| L-carnitine dehydrogenase [Brucella melitensis M28]
gi|384446386|ref|YP_005660604.1| L-carnitine dehydrogenase [Brucella melitensis NI]
gi|225642180|gb|ACO02093.1| L-carnitine dehydrogenase [Brucella melitensis ATCC 23457]
gi|262764193|gb|EEZ10225.1| L-carnitine dehydrogenase [Brucella melitensis bv. 3 str. Ether]
gi|326410403|gb|ADZ67467.1| L-carnitine dehydrogenase [Brucella melitensis M28]
gi|326553696|gb|ADZ88335.1| L-carnitine dehydrogenase [Brucella melitensis M5-90]
gi|349744383|gb|AEQ09925.1| L-carnitine dehydrogenase [Brucella melitensis NI]
Length = 413
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 135/280 (48%), Positives = 182/280 (65%), Gaps = 9/280 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ R+LD++R++AGP+C +LADLGAEVIK+E+P TGD+ R WGPP++ N T +
Sbjct: 4 LTGYRVLDMSRVLAGPWCGQILADLGAEVIKIERPRTGDDTRDWGPPWMKDEQGNPTREA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+Y+ NR K SV ++ +PEGQ +++ + +CDVL+EN+ G L + L Y+ LS IN
Sbjct: 64 SYYQSANRGKFSVALNIASPEGQDLLRKMVAECDVLIENYKAGSLAKYGLDYETLSAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCSVTGFG GP PGYD I IGGL+ ITG P G P KVG+A DL TG
Sbjct: 124 GLVYCSVTGFGQTGPRAPEPGYDFIIQGIGGLMSITGERDDKPGGGPQKVGVAVADLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL + KTGKGQ ID LL QV+ L N NYL +G R+G +HAN+V
Sbjct: 184 LYSAIAIEAALLSRAKTGKGQHIDMALLDVQVAALCNQSQNYLASGRPPGRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
P+QVF+ S+ I G+D Q+ +C + L L DPR+
Sbjct: 244 PYQVFRASDRDFIIACGNDAQFVSLCDAIGLPDLPKDPRF 283
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L L DPR+ + RV +R+ + + A + T +EW+ P +N
Sbjct: 268 LCDAIGLPDLPKDPRFTRNSDRVIHRDEIIGILAAHFLTGTADEWIGRIHPRGVPVGAIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I++ + ++ ++ +I H D VG S T E + P LGEHTD +L+
Sbjct: 328 DIARTLDEPQVKARNMLVQIPHPLNKDFVTVGSPFKLSGTPVEYKRAAPMLGEHTDTLLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
L D+ + LK + I+
Sbjct: 388 QLAKLDDDRLNDLKSRGII 406
>gi|338740264|ref|YP_004677226.1| L-carnitine dehydratase/bile acid-inducible protein F
[Hyphomicrobium sp. MC1]
gi|337760827|emb|CCB66660.1| L-carnitine dehydratase/bile acid-inducible protein F
[Hyphomicrobium sp. MC1]
Length = 397
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 133/297 (44%), Positives = 193/297 (64%), Gaps = 4/297 (1%)
Query: 208 LSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN 267
++SE+P PL+ +R+L+L R++AGP+ LADLGA VIKVE+P GD+ R WGPPF+ +
Sbjct: 2 MTSESPK-PLAGLRVLELARVLAGPWAGQTLADLGASVIKVERPDGGDDTRAWGPPFVAD 60
Query: 268 TE---LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYK 324
+ + YF NR K+S+ +D+ P G++ LAKQ DV++ENF G L + L Y
Sbjct: 61 DDGPGSAAYFHATNRGKRSIALDYDNPAGREAAVALAKQADVIIENFKVGGLAKYGLDYP 120
Query: 325 HLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDL 384
+ IN +IYCS+TGFG GPY R GYD I +GG++ +TG PDG P K+G+A D+
Sbjct: 121 AIKAINPGVIYCSITGFGQTGPYAPRAGYDFIVQGMGGIMDLTGAPDGEPQKIGVAFADI 180
Query: 385 ATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHA 444
TG+YA ++AAL + TG+G ID LL TQVS+L N NYL +G +R G +H
Sbjct: 181 FTGIYATIGILAALNRRNATGEGAIIDMALLDTQVSVLANQAMNYLASGTPPRRLGNAHP 240
Query: 445 NVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
N+VP+QVF+ ++G + I G+D Q+ +C ++ L++LA D R+ T A +A + LI
Sbjct: 241 NIVPYQVFEAADGPIIIAAGNDGQFARVCDLLGLKNLATDERFKTNARRVANRAELI 297
>gi|327307134|ref|XP_003238258.1| hypothetical protein TERG_00246 [Trichophyton rubrum CBS 118892]
gi|326458514|gb|EGD83967.1| hypothetical protein TERG_00246 [Trichophyton rubrum CBS 118892]
Length = 446
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 139/316 (43%), Positives = 197/316 (62%), Gaps = 14/316 (4%)
Query: 191 NENKISLYENFYSLDLA---LSSENPS---LPLSNVRILDLTRIIAGPFCTMLLADLGAE 244
N +K+S + N + A S PS LPL+ +R+LD+TR++AGP+CT +L DLGAE
Sbjct: 12 NTDKLSRFANNKAFTAACKRYSIAAPSVDTLPLAGIRVLDMTRVLAGPYCTQILGDLGAE 71
Query: 245 VIKVEQPVTGDECRKWGPPFL-------NNTELSTYFTCVNRNKKSVCVDFKTPEGQQII 297
V+K+E P GD+ R WGPP+ S Y+ VNRNKKSV + F G +I+
Sbjct: 72 VVKIEHPTRGDDTRAWGPPYAIYKDGTKEGPGESAYYLGVNRNKKSVGLSFAHESGIEIL 131
Query: 298 KDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIA 357
LAK+ DV VEN++PG L + + Y+ L IN +LIY SVTG+G GPY R GYD++
Sbjct: 132 HKLAKESDVFVENYIPGSLKKYKMDYESLRAINPRLIYASVTGYGQTGPYSKRAGYDVMV 191
Query: 358 ASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLST 417
+ GL+HITG DGPP KVG+A DL TGLY A+MAAL+ + +TGKGQ ID L
Sbjct: 192 EAEMGLMHITGSRDGPPVKVGVAVTDLTTGLYTSNAIMAALIARGRTGKGQYIDACLSDC 251
Query: 418 QVSMLINVGANYLNAG-IEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVM 476
Q++ L N+ ++ L +G + RWGT+H ++VP++ FKT +G + +G G+D+ + +C +
Sbjct: 252 QIATLANLASSALISGEKDSGRWGTAHPSIVPYRSFKTKDGDILLGGGNDRLFGVLCDRL 311
Query: 477 NLQHLALDPRYLTGAL 492
D R+ T AL
Sbjct: 312 GHPEWKTDARFTTNAL 327
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 83/139 (59%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + D R+ T ALRV+NRE++ K IE T ++TT+EWL + +G PYA VN
Sbjct: 307 LCDRLGHPEWKTDARFTTNALRVKNREIIDKLIEDLTEQRTTQEWLEVMEGSGMPYAAVN 366
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I H+ +V+E+ H G IK+V V YS P +RTPPP LG+HTD VLK
Sbjct: 367 DIQGALNHSHVLARGMVQEVDHPDCGPIKLVNTPVKYSHATPGIRTPPPTLGQHTDEVLK 426
Query: 121 DLLNYDETTIAKLKEKKIL 139
+++ YD+ IA+LK I+
Sbjct: 427 NVMGYDKEKIAQLKADGIV 445
>gi|332285678|ref|YP_004417589.1| hypothetical protein PT7_2425 [Pusillimonas sp. T7-7]
gi|330429631|gb|AEC20965.1| hypothetical protein PT7_2425 [Pusillimonas sp. T7-7]
Length = 406
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 130/283 (45%), Positives = 184/283 (65%), Gaps = 9/283 (3%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTEL 270
PL+ +R+LDLTR++AGP+CT LADLGAEVIK+E+P GD+ R WGPP++ +T
Sbjct: 7 PLTGIRVLDLTRVLAGPWCTQNLADLGAEVIKIERPGAGDDTRSWGPPYIKDANGQDTTE 66
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
+ Y+ NRNKKSV +D + G ++++ LA QCD+LVENF G L + L Y+ + +N
Sbjct: 67 AAYYASANRNKKSVAIDIASERGAELVRKLAVQCDILVENFKVGGLRKYGLDYESIKAVN 126
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLAT 386
LIYCS+TGFG GPY RPGYD + +GGL+ ITG P G P K G+A DL T
Sbjct: 127 PALIYCSITGFGQTGPYASRPGYDFMIQGMGGLMSITGEHDDLPGGGPQKAGVAVADLMT 186
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANV 446
G+Y+ ++AAL + ++G GQ ID LL QV+ML N NY +G+ KR G +H N+
Sbjct: 187 GMYSVVGILAALHERGRSGLGQHIDMALLDCQVAMLANQNLNYFTSGVAPKRAGNAHQNL 246
Query: 447 VPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
VP+QVF ++G++ + G+D Q++ C+V+ L D R+ T
Sbjct: 247 VPYQVFAAADGHLIVAVGNDTQFRAYCQVIERPGLPDDIRFGT 289
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 63/134 (47%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C+V+ L D R+ T RV NR++L + ++ + WL + P +N+
Sbjct: 273 CQVIERPGLPDDIRFGTNPNRVVNRDVLVPMLAEAMKTQSRDYWLEALERAGVPAGPINT 332
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
I QV+ + +Q + +E+ H G + + +S + R P LGEHT+ VL++
Sbjct: 333 IDQVYDNPQVQARGMRQELPHSAAGTAPVGASPLRFSGSPVSYRHAAPLLGEHTEQVLRE 392
Query: 122 LLNYDETTIAKLKE 135
L + I +L +
Sbjct: 393 QLGMSDEEIRQLAQ 406
>gi|169602303|ref|XP_001794573.1| hypothetical protein SNOG_04148 [Phaeosphaeria nodorum SN15]
gi|111066788|gb|EAT87908.1| hypothetical protein SNOG_04148 [Phaeosphaeria nodorum SN15]
Length = 451
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 135/290 (46%), Positives = 186/290 (64%), Gaps = 9/290 (3%)
Query: 212 NPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE-- 269
N LPL+ +R+LD+TR++AGP CT +L DLGAE+IK+E P GD+ R WGPP L T+
Sbjct: 43 NEKLPLAGIRVLDMTRVLAGPTCTQILGDLGAEIIKIEHPTRGDDTRAWGPPDLAYTDGV 102
Query: 270 ------LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGY 323
S Y+ VNRNKKS+ + F P G +I+ LA++CDVLVEN++PG L + L Y
Sbjct: 103 ERSFPGESAYYLSVNRNKKSLGLSFNNPTGIEILHKLAQKCDVLVENYLPGSLAKYQLDY 162
Query: 324 KHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASID 383
+S+IN LIY SVTG+G GPY DR GYD++ + GL+HITG D PP KVG+A D
Sbjct: 163 ATMSKINPSLIYASVTGYGQTGPYSDRAGYDVMVEAEMGLMHITGERDRPPVKVGVAVTD 222
Query: 384 LATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAG-IEGKRWGTS 442
++TG+Y V+AAL + TG GQ ID +L QV+ L N+ + L G + RWGT+
Sbjct: 223 ISTGMYTAIGVLAALYSRRDTGLGQWIDASLSDCQVAGLANIASGCLVTGKKDSGRWGTA 282
Query: 443 HANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
HA VVP++ +KT N + +G +DK Y +C+ + D R++T AL
Sbjct: 283 HATVVPYRAYKTKNTNIAVGGCNDKLYGILCRKLGKPEWITDERFITNAL 332
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 90/139 (64%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + D R++T ALRV++RE+L +EA+ +TT+EWL IF+G PYA VN
Sbjct: 312 LCRKLGKPEWITDERFITNALRVKHREVLDAMVEAELQTRTTQEWLEIFEGSGMPYAAVN 371
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I EH+ +++E+ H G +K++ V YS +P++R+PPP LGEHTD VL+
Sbjct: 372 DIQGTINHEHVLARNMIEEVDHPACGKVKLINHPVKYSRVEPKIRSPPPLLGEHTDEVLR 431
Query: 121 DLLNYDETTIAKLKEKKIL 139
+LL YDE I++++E+K +
Sbjct: 432 ELLGYDEGEISEMRERKTV 450
>gi|383760253|ref|YP_005439239.1| L-carnitine dehydratase/bile acid-inducible protein F [Rubrivivax
gelatinosus IL144]
gi|381380923|dbj|BAL97740.1| L-carnitine dehydratase/bile acid-inducible protein F [Rubrivivax
gelatinosus IL144]
Length = 415
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 131/289 (45%), Positives = 191/289 (66%), Gaps = 14/289 (4%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVT-----GDECRKWGPPFL-----N 266
L+ +R+LDL+R++AGP+CT LADLGA+V+KVE+P + GD+ R WGPPFL +
Sbjct: 9 LAGLRVLDLSRVLAGPWCTQTLADLGADVVKVERPRSARHPGGDDTRGWGPPFLKDADGH 68
Query: 267 NTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHL 326
++ + YF NRNK+SV +D P+GQ +++ LA DV++ENF G + R L + +
Sbjct: 69 DSAEAAYFVGTNRNKRSVTIDIAHPDGQALVRRLADTADVMIENFKVGDMARYGLDAQTI 128
Query: 327 SEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDG----PPCKVGIASI 382
+ +L+YCS+TG+G GPY+DR GYD +GGL+ +TG DG P KVG+A
Sbjct: 129 RATHPRLVYCSITGYGQTGPYRDRAGYDYAIQGLGGLMSVTGERDGLPGAGPQKVGVAVA 188
Query: 383 DLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTS 442
DL TG+YA A++AAL H+ TG+GQ ID LL TQV+ML N+GANYL +R G +
Sbjct: 189 DLFTGMYATVAILAALRHRDATGEGQAIDMALLDTQVAMLANLGANYLATKTPPRRVGNA 248
Query: 443 HANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
HAN+VP+QVF+ ++G++ + G+D Q++ C++ LA D R+ T A
Sbjct: 249 HANIVPYQVFEVADGHMILAVGNDGQFKRFCEIAGCAQLAADERFATNA 297
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 75/139 (53%), Gaps = 1/139 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C++ LA D R+ T A RV NR+ L +E + +WL P +N
Sbjct: 278 FCEIAGCAQLAADERFATNAARVRNRQTLIPLLEPLLHSRPRADWLAALDAAGVPCGPIN 337
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ +VFADE ++D +V + +H + G+I++V + S T P VR PP LGEHTD VL+
Sbjct: 338 DLGEVFADEQVRDRGMVTQATHPQLGEIELVASPMKLSATPPTVRRAPPLLGEHTDEVLR 397
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ + E IA L+E+ ++
Sbjct: 398 E-IGLAEAEIAALRERGVV 415
>gi|389625157|ref|XP_003710232.1| formyl-coenzyme A transferase [Magnaporthe oryzae 70-15]
gi|351649761|gb|EHA57620.1| formyl-coenzyme A transferase [Magnaporthe oryzae 70-15]
Length = 448
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 135/303 (44%), Positives = 192/303 (63%), Gaps = 11/303 (3%)
Query: 201 FYSLDLALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKW 260
YS A + +LPL R+LD+TR++AGP+CT +L DLGAEVIK+E PV GD+ R W
Sbjct: 27 LYSSAAAKPNSAGALPLEGYRVLDMTRVLAGPYCTQILGDLGAEVIKIEHPVRGDDTRAW 86
Query: 261 GPPF--------LNNTEL--STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVEN 310
GPP+ L T S Y+ VNRNKKS+ + F+ P G +I+ L +CD+LVEN
Sbjct: 87 GPPYAAYKPDSPLAGTSPGESAYYLTVNRNKKSIGLSFQDPAGVEILHKLMAKCDILVEN 146
Query: 311 FVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHP 370
++PG L + L Y ++IN LIY S+TG+G GPY DR GYD++ + GL+HITG
Sbjct: 147 YLPGALKKYKLDYATAAKINPSLIYASITGYGQTGPYSDRAGYDVMVEAEFGLMHITGTR 206
Query: 371 DGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYL 430
DGPP KVG+A DL TGLY ++MAALL + K+G+GQ +D L Q + L N+ ++ L
Sbjct: 207 DGPPVKVGVAVTDLTTGLYTSNSIMAALLARQKSGRGQHLDVALSDCQTATLANIASSCL 266
Query: 431 NAG-IEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+G + RWGT+H ++VP++ F+T + V +G G+D+ + +C + L + RY T
Sbjct: 267 ISGKKDTGRWGTAHPSIVPYRAFQTRDSAVLLGGGNDRLFAVLCDRIGRPDLKTNERYTT 326
Query: 490 GAL 492
AL
Sbjct: 327 NAL 329
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 79/139 (56%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L + RY T ALRV++R+ L ++IEA T +TT+EWL + G PYA VN
Sbjct: 309 LCDRIGRPDLKTNERYTTNALRVQHRDELEEQIEAVTRSRTTQEWLDVLAGCGMPYAAVN 368
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ EH +V E+ H G +K+V V YS + P +RT PP LG+HT+ VL
Sbjct: 369 DVQGALNHEHTIARDMVVEVEHPSCGTVKMVNTPVKYSESTPGIRTAPPTLGQHTNEVLG 428
Query: 121 DLLNYDETTIAKLKEKKIL 139
+LL D I L+EK ++
Sbjct: 429 ELLGMDGEQIEGLREKGVV 447
>gi|347975947|ref|XP_003437303.1| unnamed protein product [Podospora anserina S mat+]
gi|170940161|emb|CAP65388.1| unnamed protein product [Podospora anserina S mat+]
Length = 447
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 134/296 (45%), Positives = 189/296 (63%), Gaps = 9/296 (3%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPF--------L 265
+LPL R+LD+TR++AGP+CT +L DLGAEVIK+E PV GD+ R WGPP+ L
Sbjct: 41 TLPLEGYRVLDMTRVLAGPYCTQILGDLGAEVIKIEHPVRGDDTRAWGPPYASYKSGSAL 100
Query: 266 NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKH 325
S YF VNRNKKS+ + F+ P G +I+ LA +CD+LVEN++PG L + L ++
Sbjct: 101 EGPGESAYFLGVNRNKKSLALSFQDPAGIEILHKLAAKCDILVENYIPGALKKYGLDFET 160
Query: 326 LSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLA 385
+ +IN LIY S+TG+G GPY R GYD++ + GL+HITG DGPP KVG+A DL
Sbjct: 161 IHKINPALIYASITGYGQNGPYSKRAGYDVMVEAEFGLMHITGARDGPPVKVGVAVTDLT 220
Query: 386 TGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAG-IEGKRWGTSHA 444
TGLY ++MAALL + KTGKGQ ID L Q + L N+ ++ L +G + RWGT+H
Sbjct: 221 TGLYTSNSIMAALLARAKTGKGQHIDAALSDCQTATLANIASSSLISGEKDTGRWGTAHP 280
Query: 445 NVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHL 500
++VP++ F+T +G + G G+D+ + +C + D RY A +A + L
Sbjct: 281 SIVPYKSFETKDGDILFGGGNDRLFGILCDGLGRPEWKEDERYKINASRVAHRNEL 336
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 78/139 (56%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + D RY A RV +R L EIE T+ KTT+EWL IF+G PYA VN
Sbjct: 308 LCDGLGRPEWKEDERYKINASRVAHRNELEAEIEKITVTKTTQEWLDIFEGKGMPYAAVN 367
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ EH Q +V E+ H G IK+V + YS ++P VRTPPP LG++T+ +L+
Sbjct: 368 DVLTTLTHEHTQARNMVVEVEHGDCGPIKLVNTPIKYSHSKPRVRTPPPTLGQNTNEILR 427
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ L D+ I L+E ++
Sbjct: 428 EHLGMDDNQIQALRESGVV 446
>gi|347841756|emb|CCD56328.1| similar to caib/baif family protein [Botryotinia fuckeliana]
Length = 464
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/301 (43%), Positives = 195/301 (64%), Gaps = 9/301 (2%)
Query: 209 SSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNT 268
S+ + +LPL ++LD+TR++AGP+CT +L DLGAEVIKVE P GD+ R WGPP+
Sbjct: 53 STNDMTLPLKGYKVLDMTRVLAGPYCTQILGDLGAEVIKVEHPTKGDDTRHWGPPYAKYL 112
Query: 269 E--------LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLN 320
+ S YF VNRNKKS+ + FK P +I+ LA + D+LVEN++PG L +
Sbjct: 113 DGSGKEGPGESAYFFAVNRNKKSLGLSFKHPSAVKILHKLAAESDILVENYLPGSLKKYG 172
Query: 321 LGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIA 380
+ Y+ L EIN +LIY S+TG+G GPY++R GYD++ + GL+HITG DGPP KVG+A
Sbjct: 173 MDYETLREINPRLIYASITGYGQTGPYRNRAGYDVMVEAEMGLMHITGSRDGPPVKVGVA 232
Query: 381 SIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGK-RW 439
DL TGLY ++MAALL + +TG+GQ ID L QV+ L N+ ++ L +G + + RW
Sbjct: 233 VTDLTTGLYTSNSIMAALLARGRTGRGQHIDVALSDCQVATLSNLASSCLISGEKDEGRW 292
Query: 440 GTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSH 499
GT+H ++VP++ +KT +G + G G+D+ + +C + DPR++ +A +
Sbjct: 293 GTAHPSIVPYRSYKTKDGDILFGGGNDRLFGLLCNGLGRSEWKEDPRFVVNTARVAHRAE 352
Query: 500 L 500
L
Sbjct: 353 L 353
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 78/134 (58%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + DPR++ RV +R L IE T +KTT+EWL IF+G PYA +N
Sbjct: 325 LCNGLGRSEWKEDPRFVVNTARVAHRAELDSSIEKITQDKTTKEWLDIFEGSGLPYAAIN 384
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ EH+ +VKE+ HE G IK+V V YS ++P +RT PP LG+HTD +L+
Sbjct: 385 DVQGTLNHEHVLARDMVKEMDHEYCGPIKMVNTPVKYSESKPSIRTVPPMLGQHTDEILR 444
Query: 121 DLLNYDETTIAKLK 134
D+L DE+ I LK
Sbjct: 445 DILGMDESDIEALK 458
>gi|146275495|ref|YP_001165656.1| L-carnitine dehydratase/bile acid-inducible protein F
[Novosphingobium aromaticivorans DSM 12444]
gi|145322186|gb|ABP64130.1| L-carnitine dehydratase/bile acid-inducible protein F
[Novosphingobium aromaticivorans DSM 12444]
Length = 388
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 135/299 (45%), Positives = 193/299 (64%), Gaps = 5/299 (1%)
Query: 207 ALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL- 265
A + +PS PL VR+L+L RI+AGP+C LLADLGAEVIK+E+P GD+ R WGPPF+
Sbjct: 8 AAVTGDPSKPLDGVRVLELARILAGPWCGQLLADLGAEVIKIERPGAGDDTRHWGPPFVT 67
Query: 266 --NNTEL-STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLG 322
+ T L + YF NR K+S +D + EGQ II++LA D+++EN+ G L + L
Sbjct: 68 AEDGTSLGAAYFHSTNRGKRSFAIDIASAEGQAIIRELANGADIVIENYKVGGLAKYGLD 127
Query: 323 YKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASI 382
+ LSE+N +LI CS+TGFG GPY R GYD IA ++GG++ +TG PD P K GIA
Sbjct: 128 HAALSELNPRLITCSITGFGQTGPYAHRAGYDFIAQAMGGMMSMTGEPDREPQKAGIAVA 187
Query: 383 DLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTS 442
DL TG+Y+ A++AAL + +TG G ID LL TQV+++ N N++ +G +R+G
Sbjct: 188 DLFTGMYSTVAILAALNRRDRTGSGAHIDMALLDTQVAVMANQAMNWMTSGKVPRRFGNG 247
Query: 443 HANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
HAN+ P+Q F T +G + I G+D Q+ +C+V+ L DPR+ T L+ + L+
Sbjct: 248 HANLAPYQAFPTLDGPLVIAAGNDGQFASLCRVLRCS-LHEDPRFATNPARLSNRAELV 305
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+V+ L DPR+ T R+ NR L +E +T + + + V P +N
Sbjct: 277 LCRVLRCS-LHEDPRFATNPARLSNRAELVTTVEGRTAQWNRQALFDALEEVGVPAGPIN 335
Query: 61 SISQVFADEHI 71
+ +VFAD +
Sbjct: 336 ELDEVFADPQV 346
>gi|398806699|ref|ZP_10565599.1| putative acyl-CoA transferase/carnitine dehydratase [Polaromonas
sp. CF318]
gi|398087251|gb|EJL77844.1| putative acyl-CoA transferase/carnitine dehydratase [Polaromonas
sp. CF318]
Length = 406
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 136/295 (46%), Positives = 188/295 (63%), Gaps = 9/295 (3%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTEL 270
PLS +R+LDL+R++AGP+ LLADLGA+V+KVE+P GD+ R WGPP+L +T
Sbjct: 12 PLSGIRVLDLSRVLAGPWAGQLLADLGADVVKVEKPQGGDDTRAWGPPYLKDASGRDTGE 71
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
++YF C NRNK+SV +D TPEGQ ++ LA Q DVL+ENF G L R L Y L + +
Sbjct: 72 ASYFLCANRNKRSVAIDIATPEGQAQVRALAGQADVLLENFKVGGLKRYGLDYASLKDGH 131
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPC----KVGIASIDLAT 386
+L+YCS+TGFG GPY R GYD + +GGL+ +TG DG P KVG+A D+ T
Sbjct: 132 PRLVYCSITGFGQTGPYAARAGYDFLIQGMGGLMSVTGGADGEPGAGPQKVGVALTDIMT 191
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANV 446
GLYA AV AAL + ++G GQ ID LL Q++ L N +NYL G +R G +H N+
Sbjct: 192 GLYATVAVQAALAERERSGLGQHIDLALLDVQIACLANQASNYLAGGQLPRRMGNAHPNI 251
Query: 447 VPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
VP+Q F T++G + + G+D+Q+ C V A DPR+ + A +A + L+
Sbjct: 252 VPYQDFPTADGDIILAVGNDEQFARFCAVAGHAEWARDPRFASNAQRVAHRAVLL 306
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 58/123 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C V A DPR+ + A RV +R +L + T+ +++ +W+ + P +N
Sbjct: 277 FCAVAGHAEWARDPRFASNAQRVAHRAVLLPLLRQATVMRSSPDWIAALEAAGVPCGPIN 336
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I +VFAD +Q L + H G++ +V + S + PPP LG+HT VL
Sbjct: 337 RIDEVFADPQVQARGLRMALPHPLAGEVPLVANPIRLSGSPVSYHRPPPLLGQHTAEVLA 396
Query: 121 DLL 123
L
Sbjct: 397 QWL 399
>gi|374704613|ref|ZP_09711483.1| CoA-transferase [Pseudomonas sp. S9]
Length = 407
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 187/294 (63%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIKVE+P GD+ R WGPPFL + T +
Sbjct: 5 LSHLRVLDLSRVLAGPWAGQILADLGAEVIKVERPGVGDDTRHWGPPFLQDAAGEDTSEA 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF P GQQ++++LA + DVL+ENF G L L Y L +N
Sbjct: 65 AYYLSANRNKQSVTIDFTQPRGQQLVRELAAKSDVLIENFKVGGLAAYGLDYASLKALNP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITG----HPDGPPCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG P P KVG+A D+ TG
Sbjct: 125 RLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRADDQPGAGPVKVGVALTDILTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL + +TGKGQ ID LL QV+ L N NYL G+ KR G +H N+V
Sbjct: 185 LYSTSAILAALASRGETGKGQHIDMALLDVQVACLANQAMNYLATGMAPKRLGNAHPNIV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D+Q++ C+V A D R+ T +A + LI
Sbjct: 245 PYQDFPTADGDFILTVGNDRQFKKFCEVAGKPEWADDSRFATNQARVAHRTELI 298
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 66/139 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V A D R+ T RV +R L I T+ KTT +W+ + P VN
Sbjct: 269 FCEVAGKPEWADDSRFATNQARVAHRTELIPLIRQVTVFKTTAQWVGDLEQAGVPCGPVN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I QVFAD + +L E+ H G + V + S T + R PP LGEHTD VL+
Sbjct: 329 DIEQVFADPQVMARQLQIELPHALAGSVPQVASPIRLSETPVQYRNAPPLLGEHTDQVLQ 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
L IA+L++ +L
Sbjct: 389 RWLGLSHAEIAQLRDGAVL 407
>gi|76253781|ref|NP_001028898.1| dermal papilla derived protein 13 [Danio rerio]
gi|66911675|gb|AAH96924.1| Zgc:113390 [Danio rerio]
Length = 231
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 126/216 (58%), Positives = 167/216 (77%), Gaps = 2/216 (0%)
Query: 236 MLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTCVNRNKKSVCVDFKTPEGQQ 295
M+L DLGAEVIKVE+P +GD+ R WGPPFL E S YF VNRNKKS+ V+ K P+G +
Sbjct: 1 MILGDLGAEVIKVERPGSGDDTRAWGPPFLG--EESAYFLSVNRNKKSIAVNLKYPKGIK 58
Query: 296 IIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDI 355
++ +LAK CDVL+EN++PGKL + LGY+ L ++ +LIYCS+TG+G GP +PGYD
Sbjct: 59 VVTELAKICDVLLENYLPGKLGEMGLGYEELRKVAPRLIYCSITGYGQTGPESHKPGYDS 118
Query: 356 IAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLL 415
IA ++ G++HITG DG P + G+A DLATGLY HGA+MAALL + KTG+G IDCNLL
Sbjct: 119 IACAVSGMMHITGPEDGDPVRPGVAMTDLATGLYTHGAIMAALLQRQKTGRGLHIDCNLL 178
Query: 416 STQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
S+QV+ L ++ ANYLNAGIE +RWGT+H ++VP+Q+
Sbjct: 179 SSQVACLTHIAANYLNAGIEARRWGTAHGSIVPYQI 214
>gi|398883410|ref|ZP_10638367.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM60]
gi|398197072|gb|EJM84062.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM60]
Length = 406
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 138/294 (46%), Positives = 187/294 (63%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWSGQILADLGAEVIKVERPGNGDDTRAWGPPFLKDAYGENTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++++LA + D+L+ENF G L L Y+ L E N
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQKLVRELAAKSDILIENFKVGGLAAYGLDYESLKEANP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 NLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPEGDDGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ G GQ ID LL QV+ L N NYL G KR G +H N+V
Sbjct: 184 LYSTVAILAALAHRDHDGGGQHIDMALLDVQVACLANQAMNYLTTGNSPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ T L +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAEVAGQPQWADDPRFATNKLRVANRAVLI 297
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 68/139 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ T LRV NR +L I T+ KTT EW+ + P +N
Sbjct: 268 FAEVAGQPQWADDPRFATNKLRVANRAVLIPLIRQATVFKTTAEWVSQLERAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD ++ L E+ H G + V + S T E R PP LGEHT VL+
Sbjct: 328 DLAQVFADPQVKARGLAIELPHALAGMVPQVASPIRLSETPVEYRNAPPLLGEHTMAVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L D + LK+ +L
Sbjct: 388 RVLGLDACAVTALKDAGVL 406
>gi|149201442|ref|ZP_01878417.1| L-carnitine dehydratase/bile acid-inducible protein F [Roseovarius
sp. TM1035]
gi|149145775|gb|EDM33801.1| L-carnitine dehydratase/bile acid-inducible protein F [Roseovarius
sp. TM1035]
Length = 391
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 134/291 (46%), Positives = 183/291 (62%), Gaps = 6/291 (2%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTEL 270
PL + +LDL+RI+AGP CT LL DLGAEVIK+E + GD+ R+WGPPF T+L
Sbjct: 4 PLDGLVVLDLSRILAGPTCTQLLGDLGAEVIKIES-LEGDDTRQWGPPFALDADGTPTDL 62
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
S YF NRNKKSV VD PE Q+++ LA + DV++ENF PG L + L ++ L
Sbjct: 63 SAYFMSSNRNKKSVAVDLTDPEVQRLLHALAARADVVIENFKPGGLRKYGLDHETLCAAY 122
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYA 390
L+YCS++GFG GP +D+PGYD++A GG++ ITG G P KVG+ D+ GLYA
Sbjct: 123 PGLVYCSISGFGQTGPNRDKPGYDLMAQGYGGIMSITGEAAGEPMKVGVGVADVVCGLYA 182
Query: 391 HGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQ 450
++AAL H+ TG+GQ ID L+ ++ L+N G NYL +G+ R G +H N+VP+Q
Sbjct: 183 ATGILAALRHRDATGEGQHIDIALVDATMAWLVNQGLNYLTSGVSPTRAGNAHPNIVPYQ 242
Query: 451 VFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
VF T++G+V + G+D QY C + A DPRY T LA L+
Sbjct: 243 VFATADGHVIVAVGNDSQYARFCDYLGQPDWATDPRYATNTARLAQRDTLV 293
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 51/124 (41%), Gaps = 2/124 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C + A DPRY T R+ R+ L I +TT + + P VN
Sbjct: 264 FCDYLGQPDWATDPRYATNTARLAQRDTLVPMIAEVLATRTTAHVIAGLEARKVPVGPVN 323
Query: 61 SISQVFADEHIQ--DIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
+I Q E Q + + H GD++++G + +S T R+ PP G T+ V
Sbjct: 324 TIGQALETEQAQARGMTITMTAPHTAKGDVRLIGNPLKFSRTPVSYRSAPPTTGADTEAV 383
Query: 119 LKDL 122
L L
Sbjct: 384 LGPL 387
>gi|163844412|ref|YP_001622067.1| hypothetical protein BSUIS_B0230 [Brucella suis ATCC 23445]
gi|163675135|gb|ABY39245.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
Length = 413
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 135/280 (48%), Positives = 182/280 (65%), Gaps = 9/280 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ R+LD++R++AGP+C +LADLGAEVIK+E+P TGD+ R WGPP++ N T +
Sbjct: 4 LTGYRVLDMSRVLAGPWCGQILADLGAEVIKIERPRTGDDTRDWGPPWMKDEQGNPTREA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+Y+ NR K SV ++ +PEGQ +++ + +CDVL+EN+ G L + L Y+ LS IN
Sbjct: 64 SYYQSANRGKFSVALNIASPEGQDLLRKMVAECDVLIENYKAGSLAKYGLDYETLSAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCSVTGFG GP PGYD I IGGL+ ITG P G P KVG+A DL TG
Sbjct: 124 GLVYCSVTGFGQTGPRAPEPGYDFIIQGIGGLMSITGERDDKPGGGPQKVGVAVADLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL + KTGKGQ ID LL QV+ L N NYL +G R+G +HAN+V
Sbjct: 184 LYSAIAIEAALLSRAKTGKGQHIDMALLDVQVAALCNQSQNYLASGRPPGRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
P+QVF+ S+ I G+D Q+ +C + L L DPR+
Sbjct: 244 PYQVFRASDRDFIIACGNDAQFVSLCDAIGLPDLPKDPRF 283
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L L DPR+ + RV +R+ + + A + T +EW+ P +N
Sbjct: 268 LCDAIGLPDLPKDPRFTRNSDRVIHRDEIIGILAAHFLTGTADEWIGRIHPRGVPVGAIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I++ + ++ ++ +I H D VG + S T E + P LGEHTD +L+
Sbjct: 328 DIARALDEPQVKARNMLVQIPHPLNKDFVTVGSPIKLSGTPVEYKRAAPMLGEHTDTLLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
L D+ + LK + I+
Sbjct: 388 QLAKLDDDRLNDLKSRGII 406
>gi|260568453|ref|ZP_05838922.1| CAIB/BAIF family protein [Brucella suis bv. 4 str. 40]
gi|260155118|gb|EEW90199.1| CAIB/BAIF family protein [Brucella suis bv. 4 str. 40]
Length = 413
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 135/280 (48%), Positives = 182/280 (65%), Gaps = 9/280 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ R+LD++R++AGP+C +LADLGAEVIK+E+P TGD+ R WGPP++ N T +
Sbjct: 4 LTGYRVLDMSRVLAGPWCGQILADLGAEVIKIERPRTGDDTRDWGPPWMKDEQGNPTREA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+Y+ NR K SV ++ +PEGQ +++ + +CDVL+EN+ G L + L Y+ LS IN
Sbjct: 64 SYYQSANRGKFSVALNIASPEGQDLLRKMVAECDVLIENYKAGSLAKYGLDYETLSAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCSVTGFG GP PGYD I IGGL+ ITG P G P KVG+A DL TG
Sbjct: 124 GLVYCSVTGFGQTGPRAPEPGYDFIIQGIGGLMSITGERDDKPGGGPQKVGVAVADLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL + KTGKGQ ID LL QV+ L N NYL +G R+G +HAN+V
Sbjct: 184 LYSAIAIEAALLSRAKTGKGQHIDMALLDVQVAALCNQSQNYLASGRPPGRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
P+QVF+ S+ I G+D Q+ +C + L L DPR+
Sbjct: 244 PYQVFRASDRDFIIACGNDAQFVSLCDAIGLPDLPKDPRF 283
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L L DPR+ + RV +R+ + + A + T +EW+ P +N
Sbjct: 268 LCDAIGLPDLPKDPRFTRNSDRVIHRDEIIGILAAHFLTGTADEWIGRIHPRGVPVGAIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I++ + ++ ++ +I H D VG + S T E + P LGEHTD +L+
Sbjct: 328 DIARALDEPQVKARNMLVQIPHPLNKDFVTVGSPIKLSGTPVEYKRAAPMLGEHTDTLLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
L D+ + LK + I+
Sbjct: 388 QLAKLDDDRLNDLKSRGII 406
>gi|398963804|ref|ZP_10679871.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM30]
gi|398149325|gb|EJM37978.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM30]
Length = 406
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 138/294 (46%), Positives = 186/294 (63%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWAGQILADLGAEVIKVERPGNGDDTRAWGPPFLKDAYGENTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ ++++LA + D+L+ENF G L L Y+ L IN
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQNLVRELAAKSDILIENFKVGGLAAYGLDYESLKAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 DLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPEGDEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ G GQ ID LL QV+ L N NYL G KR G +H N+V
Sbjct: 184 LYSTVAILAALAHRDHDGGGQHIDMALLDVQVACLANQAMNYLTTGNAPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ T L +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAEVAGQPQWADDPRFATNKLRVANRAVLI 297
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 65/139 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ T LRV NR +L I T+ KTT EW+ + P +N
Sbjct: 268 FAEVAGQPQWADDPRFATNKLRVANRAVLIPLIRQATVFKTTAEWVTQLEQAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+SQVF D ++ L E+ H G + V + S T E R PP LGEHT VL+
Sbjct: 328 DLSQVFEDPQVKARGLAIELPHALAGMVPQVASPIRLSQTPVEYRRAPPLLGEHTLEVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L + LK +L
Sbjct: 388 RVLGLGAGAVEALKADGVL 406
>gi|398947653|ref|ZP_10672289.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM33]
gi|398161565|gb|EJM49792.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM33]
Length = 406
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 138/294 (46%), Positives = 187/294 (63%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWSGQILADLGAEVIKVERPGNGDDTRAWGPPFLKDAYGENTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++++LA + D+L+ENF G L L Y+ L IN
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQKLVRELAAKSDILIENFKVGGLAAYGLDYESLKAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 DLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPEGEEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ G GQ ID LL QV+ L N NYL G KR G +H N+V
Sbjct: 184 LYSTVAILAALAHRDHDGGGQHIDMALLDVQVACLANQAMNYLTTGNAPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ T L +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAEVAGQPQWADDPRFATNKLRVANRAVLI 297
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 67/139 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ T LRV NR +L I T+ KTT EW+ + P +N
Sbjct: 268 FAEVAGQPQWADDPRFATNKLRVANRAVLIPLIRQATVFKTTAEWVAQLEQAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++Q+FAD ++ L E+ H G + V + S T E R PP LGEHT VL
Sbjct: 328 DLAQMFADPQVKARGLAIELPHALAGMVPQVASPIRLSETPVEYRFAPPLLGEHTLEVLH 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L D ++ LK +L
Sbjct: 388 RVLGLDAGAVSALKASGVL 406
>gi|403053282|ref|ZP_10907766.1| L-carnitine dehydrogenase [Acinetobacter bereziniae LMG 1003]
Length = 405
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 133/280 (47%), Positives = 185/280 (66%), Gaps = 9/280 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ +R+LDL+R++AGP+C +LADLGAEVIKVE+P GD+ R WGPP++ ++T +
Sbjct: 4 LNGIRVLDLSRVLAGPWCGQILADLGAEVIKVERPKLGDDTRSWGPPWMKDDAGHDTREA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK SV +D PEGQ +IK L + DV++EN+ G L + L Y LSEIN
Sbjct: 64 AYYQSTNRNKLSVAIDIANPEGQALIKTLIQDTDVVIENYKTGSLKKYGLDYATLSEINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TGFG GP + PGYD I +GGL+ ITG P G P KVG+A DL+TG
Sbjct: 124 RLVYCSITGFGQNGPRAEEPGYDFIIQGMGGLMSITGEKDDLPGGGPQKVGVAFSDLSTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL+++ TG GQ ID LL Q++ + N G NY ++G R+G +HAN+V
Sbjct: 184 LYSTIAIQAALLNRHITGLGQYIDMALLDVQIATMANQGMNYFSSGKIPVRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
P+Q+FK S+ I G+D Q+ +C + L L DPR+
Sbjct: 244 PYQLFKASDREFIIACGNDSQFIQLCNSIGLADLPNDPRF 283
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 70/140 (50%), Gaps = 2/140 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L L DPR+ A R+++RE + + + KT +EW+ P +N
Sbjct: 268 LCNSIGLADLPNDPRFSRNADRIKHREEVIDILSKHFLSKTADEWVNAIYAAKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q F + + +++ E+ H + +VG + S T E R PP LGEHT +L
Sbjct: 328 NLEQAFNEPQVIAREMLVEMPHPLREKMTVVGSPIKLSRTPVEYRNAPPLLGEHTQTILG 387
Query: 121 DLLNYDETTIAKLKEKKILG 140
+++ + A+LK + ++G
Sbjct: 388 RIIS--DEKFAELKAQGVIG 405
>gi|306845541|ref|ZP_07478110.1| CAIB/BAIF family protein [Brucella inopinata BO1]
gi|306273862|gb|EFM55689.1| CAIB/BAIF family protein [Brucella inopinata BO1]
Length = 413
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 135/280 (48%), Positives = 182/280 (65%), Gaps = 9/280 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ R+LD++R++AGP+C +LADLGAEVIK+E+P TGD+ R WGPP++ N T +
Sbjct: 4 LTGYRVLDMSRVLAGPWCGQILADLGAEVIKIERPRTGDDTRDWGPPWMKDEQGNPTREA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+Y+ NR K SV ++ +PEGQ +++ + +CDVL+EN+ G L + L Y+ LS IN
Sbjct: 64 SYYQSANRGKFSVALNIASPEGQDLLRKMVAECDVLIENYKAGSLAKYGLDYETLSAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCSVTGFG GP PGYD I IGGL+ ITG P G P KVG+A DL TG
Sbjct: 124 GLVYCSVTGFGQTGPRAPEPGYDFIIQGIGGLMTITGERDDKPGGGPQKVGVAVADLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL + KTGKGQ ID LL QV+ L N NYL +G R+G +HAN+V
Sbjct: 184 LYSAIAIEAALLSRAKTGKGQHIDMALLDVQVAALCNQSQNYLASGRPPGRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
P+QVF+ S+ I G+D Q+ +C + L L DPR+
Sbjct: 244 PYQVFRASDRDFIIACGNDAQFVSLCDAIGLPDLPKDPRF 283
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L L DPR+ + RV +R+ + + A + T +EW+ P +N
Sbjct: 268 LCDAIGLPDLPKDPRFTRNSDRVIHRDEIIGILAAHFLTGTADEWIGRIHPRGVPVGAIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I++ + ++ ++ +I H D VG + S T E + P LGEHTD +L+
Sbjct: 328 DIARALDEPQVKARNMLVQIPHPLNKDFVTVGSPIKLSGTPVEYKRAAPMLGEHTDTLLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
L D+ + LK + I+
Sbjct: 388 QLAKLDDDRLNDLKSRGII 406
>gi|408396044|gb|EKJ75212.1| hypothetical protein FPSE_04603 [Fusarium pseudograminearum CS3096]
Length = 440
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 134/292 (45%), Positives = 188/292 (64%), Gaps = 9/292 (3%)
Query: 209 SSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNT 268
S+ LPL +R+LD+TR++AGP+CT +L DLGAEVIK+E P GD+ R WGPP+
Sbjct: 29 SAVGTGLPLEGIRVLDMTRVLAGPYCTQILGDLGAEVIKIEHPTRGDDTRAWGPPYAKYK 88
Query: 269 ELST--------YFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLN 320
E S+ YF NRNKKS+ + F+ EG Q++ LA +CDVLVEN++PG L + +
Sbjct: 89 EGSSAKGPGESAYFLGANRNKKSLGLSFQHEEGVQVLHKLAAKCDVLVENYLPGTLKKYS 148
Query: 321 LGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIA 380
+ Y+ L +IN LIY S+TG+G GPY R GYD++ + GL+HITG DGPP KVG+A
Sbjct: 149 MDYETLRKINPGLIYASITGYGQTGPYASRAGYDVMVEAEFGLMHITGERDGPPVKVGVA 208
Query: 381 SIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAG-IEGKRW 439
DL TGLY +VMAALL + K+GKGQ ID L Q + L N+ ++ L +G + RW
Sbjct: 209 VTDLTTGLYTSNSVMAALLGRAKSGKGQHIDVALSDCQTATLANIASSCLISGKKDSGRW 268
Query: 440 GTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
GT+H ++VP++ F+T +G + G G+D+ + +C + D RY T A
Sbjct: 269 GTAHPSIVPYKSFETKDGGILFGGGNDRLFGVLCDGLGQPQWKDDVRYKTNA 320
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 81/140 (57%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + D RY T A RV+NR L +IEA T KTT+EWL IF+G PYA +N
Sbjct: 301 LCDGLGQPQWKDDVRYKTNADRVKNRNDLETKIEAMTELKTTQEWLEIFEGKGLPYAAIN 360
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ EH + +V E+ H++ G +K+V V +S T P +R+ PP LG+HT+ VL+
Sbjct: 361 DVQGTLNHEHTKARNMVIEMEHDECGPLKMVNTPVKFSETPPTIRSAPPMLGQHTNEVLQ 420
Query: 121 DLLNYDETTIAKLKEKKILG 140
+ L E + L+EK ++G
Sbjct: 421 EHLGLSEAEVDVLREKGVIG 440
>gi|421664763|ref|ZP_16104899.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC110]
gi|421694474|ref|ZP_16134096.1| CoA-transferase family III protein [Acinetobacter baumannii WC-692]
gi|404567936|gb|EKA73049.1| CoA-transferase family III protein [Acinetobacter baumannii WC-692]
gi|408711934|gb|EKL57126.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC110]
Length = 405
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 133/284 (46%), Positives = 189/284 (66%), Gaps = 9/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ +T+ +
Sbjct: 4 LNGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPKVGDDTRSWGPPWMKDDSGQDTQEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK SV +D + EGQ++IK L + DV++EN+ G L + L Y+ LS IN
Sbjct: 64 AYYQSTNRNKLSVAIDIASSEGQELIKALIQDTDVVIENYKAGSLKKYGLDYESLSAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TGFG GP + PGYD I +GGL+ +TG P G P KVG+A DLATG
Sbjct: 124 KLVYCSITGFGQNGPRAEEPGYDFIIQGMGGLMSVTGERDDLPGGGPQKVGVAFSDLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL+++ TG GQ ID LL Q++ + N G NYL++G KR+G +HAN+V
Sbjct: 184 LYSTIAIQAALLNRHVTGLGQYIDMALLDVQIATMANQGMNYLSSGNIPKRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P+QVFK S+ I G+D Q+ +C+ + L L D R+ A
Sbjct: 244 PYQVFKASDRDFIIACGNDTQFIQLCRSIGLPDLPNDVRFARNA 287
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 78/140 (55%), Gaps = 2/140 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + L L D R+ A R+++R+ + ++ + KT +EW+ P +N
Sbjct: 268 LCRSIGLPDLPNDVRFARNADRIKHRDEIIGILQTHFLTKTADEWVDAIYAAKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q F + + +++ E++H + +K++G + S T E +T PP LGEHT VL
Sbjct: 328 NLEQAFEEPQVIAREMLVEMNHPQREKLKVIGSPIKLSRTPVEYKTAPPLLGEHTQAVLG 387
Query: 121 DLLNYDETTIAKLKEKKILG 140
+++ ++ +A+LKEK ++G
Sbjct: 388 RIVSSEK--LAELKEKGVIG 405
>gi|340520962|gb|EGR51197.1| predicted protein [Trichoderma reesei QM6a]
Length = 428
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 139/312 (44%), Positives = 193/312 (61%), Gaps = 19/312 (6%)
Query: 207 ALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL- 265
A + NP LPL R+LD+TR++AGP+CT +L DLGAEVIK+E P GD+ R WGPP+
Sbjct: 7 AAVNANP-LPLEGYRVLDMTRVLAGPYCTQILGDLGAEVIKIEHPTRGDDTRAWGPPYAK 65
Query: 266 -------NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDR 318
S YF VNRNK+S+ + F+ P+G I+ LA +CD+LVEN++PG L +
Sbjct: 66 YKPGSGREGPGESAYFLGVNRNKRSLGLSFQHPQGVDILHKLAAKCDILVENYLPGTLSK 125
Query: 319 LNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVG 378
+ Y+ L +IN LIY S+TG+G GPY +R GYD++ + GL+HITG DGPP KVG
Sbjct: 126 YQMDYESLRKINPGLIYASITGYGQTGPYSNRAGYDVMVEAEFGLMHITGSRDGPPVKVG 185
Query: 379 IASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAG-IEGK 437
+A DL TGLY ++MAALL + KTGKGQ ID L Q + L N+ ++ L +G +
Sbjct: 186 VAVTDLTTGLYTSNSIMAALLSRAKTGKGQHIDVALSDCQTATLANIASSALISGKKDSG 245
Query: 438 RWGTSH---------ANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYL 488
RWGT+H ++VP++ FKT +G + IG G+D+ + +C + H D RY
Sbjct: 246 RWGTAHRKSAQSLKPTSIVPYRAFKTKDGDILIGGGNDRLFGILCDGIGKSHWKDDVRYR 305
Query: 489 TGALILAMTSHL 500
T A +A L
Sbjct: 306 TNADRVAHRDEL 317
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 84/139 (60%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + H D RY T A RV +R+ L EIEA T ++TT+EWL +F+G PYA +N
Sbjct: 289 LCDGIGKSHWKDDVRYRTNADRVAHRDELEAEIEAITKQRTTQEWLDVFEGSGMPYAAIN 348
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I H + ++V EI HE G IK+V V +S TQP+VRTPPP LG+HTD +L
Sbjct: 349 DIQGTLNHSHTKAREMVVEIDHEYCGPIKMVNTPVKWSETQPKVRTPPPVLGQHTDEILS 408
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ L E IA LK++ ++
Sbjct: 409 EHLGMSEEDIAALKDQGVV 427
>gi|427813211|ref|ZP_18980275.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
gi|410564211|emb|CCN21755.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
Length = 408
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/286 (46%), Positives = 182/286 (63%), Gaps = 9/286 (3%)
Query: 213 PSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NN 267
P+ PL R+LDLTR++AGP+CT LADLGAEVIKVE+P GDE R WGPP++ +
Sbjct: 2 PNKPLQKYRVLDLTRVLAGPWCTQNLADLGAEVIKVERPGVGDETRGWGPPWIPAGAASK 61
Query: 268 TELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLS 327
S YF NR KKS+ +DF T +GQ +++ LA CDVLVEN+ G L R +LGY+ L
Sbjct: 62 RRDSAYFGSANRGKKSITIDFTTAQGQALVRQLAADCDVLVENYKTGTLARYDLGYEDLK 121
Query: 328 EINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASID 383
+N L+YCSVTGFG GPY+ +PGYD + ++ GL+ ITG P G P KVGIA D
Sbjct: 122 AVNPGLVYCSVTGFGHTGPYRHKPGYDFVFQAMSGLMSITGERDDLPGGGPQKVGIAVAD 181
Query: 384 LATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSH 443
+ TG+Y+ AV+AALL + G+GQ +D LL ++ N NY+ +G +R+G +H
Sbjct: 182 ITTGMYSTVAVLAALLERESHGRGQHLDMALLDCAMAFNSNQAVNYMASGSMPRRYGNAH 241
Query: 444 ANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+N VP+QVF T +G + + G+D + C+ L D R++T
Sbjct: 242 SNAVPYQVFDTRDGQIVVAVGNDALFAAYCRAAQRPDLCADARFVT 287
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 65/138 (47%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C+ L D R++T + R++NR+ L ++ KT+ +WL + P A +N
Sbjct: 271 CRAAQRPDLCADARFVTVSGRLQNRDELLSQLAVVMAGKTSAQWLAVLDAAGVPCAPIND 330
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
Q AD ++ + I+ E + + + +S T + PP LG+HT VL++
Sbjct: 331 FEQALADPQVKARNIETHIALEDGAVFRTIASPLRFSETPLDHLAGPPMLGQHTADVLRE 390
Query: 122 LLNYDETTIAKLKEKKIL 139
L DE A L++ ++
Sbjct: 391 RLGLDEAQQAGLRQAGVI 408
>gi|160897649|ref|YP_001563231.1| L-carnitine dehydratase/bile acid-inducible protein F [Delftia
acidovorans SPH-1]
gi|160363233|gb|ABX34846.1| L-carnitine dehydratase/bile acid-inducible protein F [Delftia
acidovorans SPH-1]
Length = 415
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 135/290 (46%), Positives = 187/290 (64%), Gaps = 9/290 (3%)
Query: 209 SSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL--- 265
S+ + L+ +++LDL+R++AGP+CT LADLGA+VIKVE+PV GD+ R WGPPFL
Sbjct: 3 STSSAPAALAGIKVLDLSRVLAGPWCTQTLADLGADVIKVERPVAGDDTRHWGPPFLARD 62
Query: 266 --NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGY 323
T+ ++YFT NRNK+SV +D TP+GQQ+I+ +A DVLVENF G L + L Y
Sbjct: 63 DGQATQEASYFTACNRNKRSVTIDMSTPDGQQLIRQMAAGADVLVENFKVGGLAQYGLDY 122
Query: 324 KHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGI 379
+ L +N +LIYCSVTGFG GPY +R GYD++ ++ GL+ ITGH P G P KVG+
Sbjct: 123 ESLKALNPRLIYCSVTGFGQTGPYAERAGYDLMVQAMCGLMSITGHADEAPGGGPLKVGV 182
Query: 380 ASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRW 439
A ID+ TGLYA A++AAL + +G+GQ ID LL +++L N A +L G R
Sbjct: 183 AVIDVFTGLYASNAILAALHARQASGRGQHIDMALLDVGMAVLGNQAAGFLATGESPGRA 242
Query: 440 GTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
G H ++ P+Q F T+NG V + G+D Q+ C + A D R+ T
Sbjct: 243 GNIHPSLAPYQDFATANGNVLLAIGNDGQFARFCAAVGEAGWAQDERFAT 292
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C + A D R+ T RV NR+ L + + + T EW+ + + + P +N
Sbjct: 275 FCAAVGEAGWAQDERFATNTARVRNRQALLERMVPLMKTRGTAEWIALLEDKAVPCGPIN 334
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDI-KIVGPAVAYSL--TQPEVRTPPPALGEHTDY 117
+I+Q F D ++ + E+ E I +I G A L T P +R+ PP+LG+HTD
Sbjct: 335 TIAQAFDDPQVRARGIRVELPREAGDGISRIAGVASPMRLSDTPPVLRSAPPSLGQHTDE 394
Query: 118 VLKDLLNYDETTIAKLKEKKIL 139
VL + L I L+ + ++
Sbjct: 395 VLGE-LGIAPMAIQALRSRGVV 415
>gi|255320469|ref|ZP_05361650.1| L-carnitine dehydrogenase [Acinetobacter radioresistens SK82]
gi|262378365|ref|ZP_06071522.1| formyl-CoA transferase [Acinetobacter radioresistens SH164]
gi|255302441|gb|EET81677.1| L-carnitine dehydrogenase [Acinetobacter radioresistens SK82]
gi|262299650|gb|EEY87562.1| formyl-CoA transferase [Acinetobacter radioresistens SH164]
Length = 409
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/282 (46%), Positives = 184/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L +R+LDL+R++AGP+C +LADLGAEVIKVE+P TGD+ R WGPP++ T S
Sbjct: 4 LQGIRVLDLSRVLAGPWCGQILADLGAEVIKVERPGTGDDTRMWGPPWMPDQNGEQTRES 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF C NRNK SV +D T EGQ++I+++AK DV++EN+ G L R L Y L +N
Sbjct: 64 GYFQCTNRNKHSVAIDMATHEGQELIREMAKTADVVIENYKAGSLVRYGLDYDSLKVLNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPC----KVGIASIDLATG 387
QL+YCS+TGFG GP PGYD I + GL+ ITG PD P KVG+A +DL TG
Sbjct: 124 QLVYCSITGFGQDGPRAAEPGYDFIIQGMAGLMSITGEPDSIPGGGAQKVGVAVVDLQTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA A+ AALL + TG+GQ ID +LL Q++ L N G NYL++G +R G +H N+V
Sbjct: 184 LYATIAIQAALLARQHTGRGQYIDMSLLDVQIAGLANQGMNYLSSGKAPQRMGNTHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+ + + G+D+Q++++C ++ + L +LT
Sbjct: 244 PYQTFRAKDKEFIVACGNDRQFRELCIAIDRKDLLGRSEFLT 285
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 2/139 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ + L +LT RV++R L + +++ + W+ V P +N
Sbjct: 268 LCIAIDRKDLLGRSEFLTNQSRVKHRHELVGILSDYFLQENAQYWVERIHAVKVPVGMIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI + FA+ +Q +++ ++ H +++G + S T E PP LGEHT +L+
Sbjct: 328 SIEEAFAEPQVQARQMLVKLPHVLNPAFRVIGSPIKLSDTPVEYWQAPPRLGEHTGQILR 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ E + L+E K++
Sbjct: 388 EFKT--EEQLQLLRENKVI 404
>gi|398880894|ref|ZP_10635912.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM67]
gi|398190967|gb|EJM78172.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM67]
Length = 406
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 138/294 (46%), Positives = 187/294 (63%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWSGQILADLGAEVIKVERPGNGDDTRAWGPPFLKDAYGENTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++++LA + D+L+ENF G L L Y+ L E N
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQKLVRELAAKSDILIENFKVGGLAAYGLDYESLKEANP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 NLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPEGDDGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ G GQ ID LL QV+ L N NYL G KR G +H N+V
Sbjct: 184 LYSTVAILAALAHRDHDGGGQHIDMALLDVQVACLANQAMNYLTTGNAPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ T L +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAEVAGQPQWADDPRFATNKLRVANRAVLI 297
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 68/139 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ T LRV NR +L I T+ KTT EW+ + P +N
Sbjct: 268 FAEVAGQPQWADDPRFATNKLRVANRAVLIPLIRQATVFKTTAEWVSQLERAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD ++ L E+ H G + V + S T E R PP LGEHT VL+
Sbjct: 328 DLAQVFADPQVKARGLAIELPHALAGIVPQVASPIRLSETPVEYRNAPPLLGEHTMAVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L D + LK+ +L
Sbjct: 388 RVLGLDACAVTALKDAGVL 406
>gi|121603140|ref|YP_980469.1| L-carnitine dehydratase/bile acid-inducible protein F [Polaromonas
naphthalenivorans CJ2]
gi|120592109|gb|ABM35548.1| L-carnitine dehydratase/bile acid-inducible protein F [Polaromonas
naphthalenivorans CJ2]
Length = 415
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 135/285 (47%), Positives = 185/285 (64%), Gaps = 14/285 (4%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
L+ +RILDL+R++AGP+CT LADLGA+VIK+E+P +GD+ R WGPPFL + T +
Sbjct: 4 LNGIRILDLSRVLAGPWCTQTLADLGADVIKIERPGSGDDTRTWGPPFLKDDEGAETHEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV D P+GQ +I++LA+ CDV VENF G + R L Y L +N
Sbjct: 64 AYYLGANRNKRSVTCDIAKPDGQALIRELARHCDVFVENFKVGDMARYGLDYASLKLLNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD---GPPCKVGIASIDLATGL 388
+L+YCSVTGFG GPY +R GYD +GGL+ +TG D G P KVG+A DL TG+
Sbjct: 124 RLVYCSVTGFGQNGPYAERAGYDYAIQGMGGLMSVTGERDDLGGGPQKVGVAVADLMTGM 183
Query: 389 YAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVP 448
YA ++AAL H KTG GQ +D LL TQV+ML N+GANYL +G +R G +H N+VP
Sbjct: 184 YATVGILAALRHAEKTGVGQLVDLALLDTQVAMLANLGANYLVSGKVPQRVGNAHMNIVP 243
Query: 449 HQVFKT------SNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
+QVF+ S ++ + G+D QY C + + L ++P +
Sbjct: 244 YQVFEVAPAADGSKDHLILAVGNDAQYVKFCAIAGIPELGVNPLF 288
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 73/145 (50%), Gaps = 8/145 (5%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C + + L ++P + RV NR L +E+ + +WL + P +N
Sbjct: 273 FCAIAGIPELGVNPLFAKNRDRVHNRAQLVPILESVMKLRGKADWLAALEAAKVPCGAIN 332
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRT------PPPALGEH 114
++++VFAD I+ +V H D+ +V + S T VRT PPP LG+H
Sbjct: 333 NLAEVFADPQIEARDMVTHWRHPLKSDLPLVASPIKLSAT--PVRTPGQGGLPPPLLGQH 390
Query: 115 TDYVLKDLLNYDETTIAKLKEKKIL 139
T+ VL++LL+Y + +++LK +++
Sbjct: 391 TEEVLRELLDYSDAQLSQLKTARVI 415
>gi|17989364|ref|NP_541997.1| alpha-methylacyl-CoA racemase [Brucella melitensis bv. 1 str. 16M]
gi|17985235|gb|AAL54261.1| alpha-methylacyl-CoA racemase [Brucella melitensis bv. 1 str. 16M]
Length = 415
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 135/280 (48%), Positives = 182/280 (65%), Gaps = 9/280 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ R+LD++R++AGP+C +LADLGAEVIK+E+P TGD+ R WGPP++ N T +
Sbjct: 6 LTGYRVLDMSRVLAGPWCGQILADLGAEVIKIERPRTGDDTRDWGPPWMKDEQGNPTREA 65
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+Y+ NR K SV ++ +PEGQ +++ + +CDVL+EN+ G L + L Y+ LS IN
Sbjct: 66 SYYQSANRGKFSVALNIASPEGQDLLRKMVAECDVLIENYKAGSLAKYGLDYETLSAINP 125
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCSVTGFG GP PGYD I IGGL+ ITG P G P KVG+A DL TG
Sbjct: 126 GLVYCSVTGFGQTGPRAPEPGYDFIIQGIGGLMSITGERDDKPGGGPQKVGVAVADLMTG 185
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL + KTGKGQ ID LL QV+ L N NYL +G R+G +HAN+V
Sbjct: 186 LYSAIAIEAALLSRAKTGKGQHIDMALLDVQVAALCNQSQNYLVSGRPPGRYGNAHANIV 245
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
P+QVF+ S+ I G+D Q+ +C + L L DPR+
Sbjct: 246 PYQVFRASDRDFIIACGNDAQFVSLCDAIGLPDLPKDPRF 285
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L L DPR+ + RV +R+ + + A + T +EW+ P +N
Sbjct: 270 LCDAIGLPDLPKDPRFTRNSDRVIHRDEIIGILAAHFLTGTADEWIGRIHPRGVPVGAIN 329
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I++ + ++ ++ +I H D VG S T E + P LGEHTD +L+
Sbjct: 330 DIARTLDEPQVKARNMLVQIPHPLNKDFVTVGSPFKLSGTPVEYKRAAPMLGEHTDTLLQ 389
Query: 121 DLLNYDETTIAKLKEKKIL 139
L D+ + LK + I+
Sbjct: 390 QLAKLDDDRLNDLKSRGII 408
>gi|254470752|ref|ZP_05084155.1| caib/baif family protein [Pseudovibrio sp. JE062]
gi|211959894|gb|EEA95091.1| caib/baif family protein [Pseudovibrio sp. JE062]
Length = 428
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 190/301 (63%), Gaps = 8/301 (2%)
Query: 209 SSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-- 266
SS N PL + +LDL+RI+AGP CT LL D+GAE+IK+E P GD+ RKWGPPFL
Sbjct: 12 SSNNAKGPLDGLVVLDLSRILAGPTCTQLLGDMGAEIIKIEHPQRGDDTRKWGPPFLKGK 71
Query: 267 ---NTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGY 323
+T S Y+ NRNK S+ +D ++ EG +++K+LA DV++ENF G L R LGY
Sbjct: 72 DGADTGESAYYLSSNRNKHSLGIDMRSEEGVEMLKELAATADVVIENFKVGDLARKGLGY 131
Query: 324 KHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD---GPPCKVGIA 380
L N +LIYCS+TGFG GPY R GYD + ++GG++ ITG P+ G P K+G+
Sbjct: 132 DDLRAKNDRLIYCSITGFGQTGPYSHRAGYDALIQAMGGIMSITGLPEEEGGSPTKIGVG 191
Query: 381 SIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWG 440
D+ G+YA A++AAL H+ KTG+GQ ID +LL QV+ LIN G +YL G KR G
Sbjct: 192 IADVMCGMYACNAILAALHHREKTGEGQHIDISLLDCQVAWLINQGLSYLTDGNIPKRLG 251
Query: 441 TSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHL 500
+H +VP++ F S+ + G+D QYQ C+V+ L+ DPR+ T A + S L
Sbjct: 252 NAHPTIVPYETFPASDKDFMVAVGNDAQYQRFCEVLGCPELSTDPRFATNADRVRNRSEL 311
Query: 501 I 501
+
Sbjct: 312 V 312
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 66/143 (46%), Gaps = 2/143 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V+ L+ DPR+ T A RV NR L + T+++ + W + V P VN
Sbjct: 283 FCEVLGCPELSTDPRFATNADRVRNRSELVPLLRQFTIKQGAQHWTDELEAVGVPCGPVN 342
Query: 61 SISQVFADEHIQDIKLVKEISHEKY--GDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
++ VF+D I + + H++ G + ++G + YS T R PP LGE + V
Sbjct: 343 DLAGVFSDPQILHRGMKISLPHKQSEDGQVSLIGNPINYSKTPVTYRKAPPTLGEDSLEV 402
Query: 119 LKDLLNYDETTIAKLKEKKILGL 141
L L I L + ++ L
Sbjct: 403 LTKYLQKTREEIDDLAARGVVSL 425
>gi|288961556|ref|YP_003451866.1| acyl-CoA transferase/carnitine dehydratase [Azospirillum sp. B510]
gi|288913836|dbj|BAI75322.1| acyl-CoA transferase/carnitine dehydratase [Azospirillum sp. B510]
Length = 400
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 130/290 (44%), Positives = 186/290 (64%), Gaps = 6/290 (2%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PLS++R+L+L+R++AGP+ LADLGA+VIKVE+P GD+ R WGPP+ + S YF
Sbjct: 4 PLSHIRVLELSRVLAGPWSAQTLADLGADVIKVERPGAGDDTRAWGPPWAGDQ--SAYFL 61
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
NR K+S+ +DF+ PEGQ++++ LA Q DV++ENF G L + L Y L +N +L+Y
Sbjct: 62 STNRGKRSITIDFERPEGQELVRGLAAQADVVIENFKVGGLVKYGLDYDSLKAVNPRLVY 121
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATGLYAH 391
CS+TGFG GPY++R GYD + +GGL+ +TG P G P KVG+A D+ TGLYA
Sbjct: 122 CSITGFGQTGPYRNRAGYDFMIQGMGGLMSVTGQTDGEPGGGPVKVGVAVTDIFTGLYAT 181
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
+M AL H+ +TG+GQ++D LL QV++L N N L G +R G +H N+VP+Q
Sbjct: 182 IGIMGALAHRDRTGEGQQVDLALLDVQVAVLANQAMNCLVGGKPPQRLGNAHPNIVPYQA 241
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
F T +G++ + G+D Q+ C V LA D RY T +A L+
Sbjct: 242 FATCDGHIILAVGNDGQFAKFCAVAGHPELAADERYATNPARVANRKELV 291
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 70/139 (50%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C V LA D RY T RV NR+ L +EA + +++WL + V P +N
Sbjct: 262 FCAVAGHPELAADERYATNPARVANRKELVPLLEALIRTRDSQDWLTALERVGVPCGPIN 321
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ VFAD +Q + +++ H G + V + YS T T PP LG+HTD VL
Sbjct: 322 DLAAVFADPQVQARAIRQDLPHPTQGSVPTVASPIRYSGTPLVHDTAPPTLGQHTDAVLA 381
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ L E IA L++K ++
Sbjct: 382 ESLGLGEADIAALRDKGVI 400
>gi|424920740|ref|ZP_18344101.1| acyl-CoA transferase/carnitine dehydratase [Pseudomonas fluorescens
R124]
gi|404301900|gb|EJZ55862.1| acyl-CoA transferase/carnitine dehydratase [Pseudomonas fluorescens
R124]
Length = 406
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 138/294 (46%), Positives = 186/294 (63%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWAGQILADLGAEVIKVERPGNGDDTRAWGPPFLKDAYGENTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ ++++LA + D+L+ENF G L L Y+ L IN
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQNLVRELAAKSDILIENFKVGGLAAYGLDYESLKAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 DLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPEGDEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ G GQ ID LL QV+ L N NYL G KR G +H N+V
Sbjct: 184 LYSTVAILAALAHRDHDGGGQHIDMALLDVQVACLANQAMNYLTTGNAPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ T L +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAEVAGQPQWADDPRFATNKLRVANRAVLI 297
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 66/139 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ T LRV NR +L I T+ KTT EW+ + P +N
Sbjct: 268 FAEVAGQPQWADDPRFATNKLRVANRAVLIPLIRQATVFKTTAEWVAQLEQAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+SQVF D ++ L E+ H G + V + S T E R PP LGEHT VL+
Sbjct: 328 DLSQVFEDPQVKARGLAIELPHALAGMVPQVASPIRLSQTPVEYRRAPPLLGEHTLEVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L T+ L+ +L
Sbjct: 388 RVLGLGAGTVDALRADGVL 406
>gi|306838547|ref|ZP_07471385.1| CAIB/BAIF family protein [Brucella sp. NF 2653]
gi|306406414|gb|EFM62655.1| CAIB/BAIF family protein [Brucella sp. NF 2653]
Length = 413
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 135/280 (48%), Positives = 181/280 (64%), Gaps = 9/280 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ R+LD++R++AGP+C +LADLGAEVIK+E+P TGD+ R WGPP++ N T +
Sbjct: 4 LTGYRVLDMSRVLAGPWCGQILADLGAEVIKIERPRTGDDTRDWGPPWMKDEQGNPTREA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+Y+ NR K SV ++ +PEGQ +++ + +CDVL+EN+ G L + L Y LS IN
Sbjct: 64 SYYQSANRGKFSVALNIASPEGQDLLRKMVAECDVLIENYKAGSLAKYGLDYATLSAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCSVTGFG GP PGYD I IGGL+ ITG P G P KVG+A DL TG
Sbjct: 124 GLVYCSVTGFGQTGPRAPEPGYDFIIQGIGGLMSITGERDDKPGGGPQKVGVAVADLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL + KTGKGQ ID LL QV+ L N NYL +G R+G +HAN+V
Sbjct: 184 LYSAIAIEAALLSRAKTGKGQHIDMALLDVQVAALCNQSQNYLASGRPPGRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
P+QVF+ S+ I G+D Q+ +C + L L DPR+
Sbjct: 244 PYQVFRASDRDFIIACGNDAQFVSLCDAIGLPDLPKDPRF 283
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L L DPR+ + RV +R+ + + A + T +EW+ P +N
Sbjct: 268 LCDAIGLPDLPKDPRFTRNSDRVIHRDEIIGILAAHFLTGTADEWIGRIHPRGVPVGAIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I++ + ++ ++ +I H D VG + S T E + P LGEHTD +L+
Sbjct: 328 DIARALDEPQVKARNMLVQIPHPLNKDFVTVGSPIKLSGTPVEYKRAAPMLGEHTDTLLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
L D+ + LK + I+
Sbjct: 388 QLAKLDDDRLNDLKSRGII 406
>gi|260564366|ref|ZP_05834851.1| CAIB/BAIF family protein [Brucella melitensis bv. 1 str. 16M]
gi|265989576|ref|ZP_06102133.1| L-carnitine dehydrogenase [Brucella melitensis bv. 1 str. Rev.1]
gi|260152009|gb|EEW87102.1| CAIB/BAIF family protein [Brucella melitensis bv. 1 str. 16M]
gi|263000245|gb|EEZ12935.1| L-carnitine dehydrogenase [Brucella melitensis bv. 1 str. Rev.1]
Length = 413
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 135/280 (48%), Positives = 182/280 (65%), Gaps = 9/280 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ R+LD++R++AGP+C +LADLGAEVIK+E+P TGD+ R WGPP++ N T +
Sbjct: 4 LTGYRVLDMSRVLAGPWCGQILADLGAEVIKIERPRTGDDTRDWGPPWMKDEQGNPTREA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+Y+ NR K SV ++ +PEGQ +++ + +CDVL+EN+ G L + L Y+ LS IN
Sbjct: 64 SYYQSANRGKFSVALNIASPEGQDLLRKMVAECDVLIENYKAGSLAKYGLDYETLSAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCSVTGFG GP PGYD I IGGL+ ITG P G P KVG+A DL TG
Sbjct: 124 GLVYCSVTGFGQTGPRAPEPGYDFIIQGIGGLMSITGERDDKPGGGPQKVGVAVADLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL + KTGKGQ ID LL QV+ L N NYL +G R+G +HAN+V
Sbjct: 184 LYSAIAIEAALLSRAKTGKGQHIDMALLDVQVAALCNQSQNYLVSGRPPGRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
P+QVF+ S+ I G+D Q+ +C + L L DPR+
Sbjct: 244 PYQVFRASDRDFIIACGNDAQFVSLCDAIGLPDLPKDPRF 283
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L L DPR+ + RV +R+ + + A + T +EW+ P +N
Sbjct: 268 LCDAIGLPDLPKDPRFTRNSDRVIHRDEIIGILAAHFLTGTADEWIGRIHPRGVPVGAIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I++ + ++ ++ +I H D VG S T E + P LGEHTD +L+
Sbjct: 328 DIARTLDEPQVKARNMLVQIPHPLNKDFVTVGSPFKLSGTPVEYKRAAPMLGEHTDTLLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
L D+ + LK + I+
Sbjct: 388 QLAKLDDDRLNDLKSRGII 406
>gi|94314067|ref|YP_587276.1| L-carnitine dehydratase/bile acid-inducible protein F [Cupriavidus
metallidurans CH34]
gi|93357919|gb|ABF12007.1| L-carnitine dehydratase/bile acid-inducible protein F [Cupriavidus
metallidurans CH34]
Length = 407
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 135/284 (47%), Positives = 186/284 (65%), Gaps = 9/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L ++++LDL+R++AGP+ T LAD+GAEVIKVE+P GD+ R WGPPFL N T+ S
Sbjct: 5 LGHIKVLDLSRVLAGPWATQNLADMGAEVIKVERPGAGDDTRGWGPPFLKDPQGNETDDS 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+YF NR KKS+ +D +P+GQ II+ LA++CDV+VEN+ G L R L Y+ L ++N
Sbjct: 65 SYFLSANRGKKSITIDLASPKGQDIIRALARECDVVVENYKVGTLARYGLSYEDLRKLNP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+L+YCS+TGFG GPY PGYD + +GGL+ ITG PDG P K GIA DL TG
Sbjct: 125 RLVYCSITGFGQTGPYAALPGYDFVFQGMGGLMSITGMPDGEPGAGPVKSGIAITDLLTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA A++AAL H+ +G+GQ ID +LL V++ NY +G +R G +H+N+V
Sbjct: 185 MYATSAILAALEHRNVSGEGQYIDISLLDCVVTINSYQAINYFLSGKVPQRMGNAHSNMV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P+QVF+ G V + G+D QY C V+ LA D R+ T A
Sbjct: 245 PYQVFRCKEGDVIVAVGNDTQYAAFCGVIGRPDLAEDARFTTAA 288
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 71/141 (50%), Gaps = 4/141 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C V+ LA D R+ T A R NRE L ++ + +T EW+ + + + P +
Sbjct: 269 FCGVIGRPDLAEDARFTTAAQRNRNRETLIPQVAEAMLARTMTEWVTLMEAANVPCGPIY 328
Query: 61 SISQVFADEHIQ--DIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
++ QVF D ++ D++LV E H + + +S T + P LGEHTD V
Sbjct: 329 NMKQVFEDPQVRHRDMQLVLE--HSSGSKAPSLANPIRFSDTPIRYQRSAPTLGEHTDRV 386
Query: 119 LKDLLNYDETTIAKLKEKKIL 139
L+D+L + TI L+E+ ++
Sbjct: 387 LQDMLAFSAETIDALREQGVI 407
>gi|426407024|ref|YP_007027123.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
sp. UW4]
gi|426265241|gb|AFY17318.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
sp. UW4]
Length = 406
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 187/294 (63%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWAGQILADLGAEVIKVERPGNGDDTRAWGPPFLKDAYGENTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++++LA + D+L+ENF G L L Y+ + IN
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQKLVRELAAKSDILIENFKVGGLAAYGLDYESMKAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 DLIYCSITGFGQTGPYARRAGYDFMIQGLGGLMSLTGRPEGEEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ G GQ ID LL QV+ L N NYL G KR G +H N+V
Sbjct: 184 LYSTVAILAALAHRDHDGGGQHIDMALLDVQVACLANQAMNYLTTGNAPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ T L +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAEVAGQPQWADDPRFATNKLRVANRALLI 297
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 68/139 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ T LRV NR LL I T+ KTT EW+ + P +N
Sbjct: 268 FAEVAGQPQWADDPRFATNKLRVANRALLIPLIRQATVFKTTAEWVAQLEQAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++Q+FAD ++ L E+ H G + V + S T E R PP LGEHT VL
Sbjct: 328 DLAQMFADPQVKARGLAIELPHALAGMVPQVASPIRLSETPVEYRFAPPLLGEHTLEVLH 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L D +++ LK +L
Sbjct: 388 RVLGLDAGSVSALKASGVL 406
>gi|329849516|ref|ZP_08264362.1| coA-transferase family III family protein [Asticcacaulis
biprosthecum C19]
gi|328841427|gb|EGF90997.1| coA-transferase family III family protein [Asticcacaulis
biprosthecum C19]
Length = 384
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 133/289 (46%), Positives = 188/289 (65%), Gaps = 4/289 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL----S 271
PLS +++L+L RI+AGP+C LLADLGAEVIK+E+P TGD+ R WGPPF+ ++E +
Sbjct: 9 PLSGLKVLELARILAGPWCGQLLADLGAEVIKIERPETGDDTRTWGPPFVTDSEGNVWGA 68
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NR K SV V F+TPEGQ II+ LA + D+++ENF G L + L Y L +N
Sbjct: 69 AYFHSCNRGKSSVAVAFETPEGQAIIRTLAAEADIVIENFKVGGLKKYGLDYDSLKAVNQ 128
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+LIY S+TGFG GPY R GYD I + GL+ ITG P+ P KVG+A +D+ TG+Y
Sbjct: 129 RLIYASITGFGQTGPYAARAGYDYIIQGMSGLMDITGEPEREPQKVGVAIVDIFTGVYTA 188
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A++AAL ++ TG+G ID +L T ++L N +NYL +G R G +H N+ P+QV
Sbjct: 189 TAILAALNGRHTTGQGCHIDMSLYDTATAVLANQASNYLVSGKSPSRLGNAHPNIAPYQV 248
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHL 500
F+ ++G+V I G+D Q+ +C + +A +P Y T AL +A + L
Sbjct: 249 FQVADGHVIIAVGNDGQFYKLCAALCAPEIAANPAYATNALRVATRTDL 297
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + +A +P Y T ALRV R L ++ ++ T E L + + P +N
Sbjct: 269 LCAALCAPEIAANPAYATNALRVATRTDLQSILQPFLLQHTRAELLDLLERHGVPAGPIN 328
Query: 61 SISQVFADEHI 71
I VF+D I
Sbjct: 329 RIEDVFSDPQI 339
>gi|398847692|ref|ZP_10604584.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM84]
gi|398251325|gb|EJN36590.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM84]
Length = 406
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 134/294 (45%), Positives = 188/294 (63%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGA+VIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWSGQILADLGADVIKVERPGNGDDTRSWGPPFLKDAQGENTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++++LA + D+++ENF G L L Y+ L +N
Sbjct: 64 AYYLSANRNKRSVTIDFTQPEGQRLVRELAARSDIVIENFKVGGLAAYGLDYQSLKAVNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG PDG P KVG+A D+ TG
Sbjct: 124 KLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPDGEEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ + G GQ ID LL QV+ L N NYL G +R G +H N+V
Sbjct: 184 LYSTVAILAALAHRDQAGVGQHIDMALLDVQVACLANQAMNYLTTGNPPRRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ T +A + LI
Sbjct: 244 PYQDFPTADGNFILTVGNDGQFRKFAEVAGQPQWADDPRFATNKQRVANRAALI 297
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 63/139 (45%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ T RV NR L I T+ KTT EW+ + P +N
Sbjct: 268 FAEVAGQPQWADDPRFATNKQRVANRAALIPLIRQATVFKTTTEWVQQLEAAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++Q+F D + L + H G + V + S T E R PP LGEHT+ VL
Sbjct: 328 DLAQMFQDPQVLARGLAVNLPHALAGSVPQVASPIRLSETPVEYRHAPPLLGEHTERVLA 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
D+L D + L+ +L
Sbjct: 388 DVLGLDAEAVQLLRGAGVL 406
>gi|260426045|ref|ZP_05780024.1| L-carnitine dehydratase/bile acid-inducible protein F [Citreicella
sp. SE45]
gi|260420537|gb|EEX13788.1| L-carnitine dehydratase/bile acid-inducible protein F [Citreicella
sp. SE45]
Length = 373
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 136/290 (46%), Positives = 183/290 (63%), Gaps = 3/290 (1%)
Query: 213 PSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN--NTEL 270
P PL VR+++L RI+AGP+ +L+DLGAEVIK+E GD+ RKWGPPF++ +
Sbjct: 5 PRGPLEGVRVIELARILAGPWAGQILSDLGAEVIKIEAD-RGDDTRKWGPPFIDRGDERS 63
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
+ YF C NR K SV VD TPEGQ I+++ + D+L+ENF G L + L + L+++N
Sbjct: 64 AAYFHCCNRGKHSVVVDISTPEGQAQIREMVQDADILIENFKVGGLAKYGLDFASLAQVN 123
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYA 390
LIYCS+TGFG GPY R GYD I + G + ITG+PDG P + G+A DL TGLY+
Sbjct: 124 PGLIYCSITGFGQDGPYAHRAGYDYIIQGMSGFMSITGNPDGQPQRTGVAITDLFTGLYS 183
Query: 391 HGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQ 450
++AAL K +TGKGQ +D LL V+ N NYL G R G H N+ P+Q
Sbjct: 184 VSGILAALHQKQRTGKGQHVDMALLDCAVAATANQAMNYLATGEAPGRTGNYHPNLTPYQ 243
Query: 451 VFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHL 500
VF S+GY+ I TG+D QYQ +C+++ L LA P YLT A +A + L
Sbjct: 244 VFDCSDGYIIIATGNDPQYQRLCRLLGLDDLAEHPDYLTNADRIANRTAL 293
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+++ L LA P YLT A R+ NR L ++ A+T + + L + P +N
Sbjct: 265 LCRLLGLDDLAEHPDYLTNADRIANRTALEAQLMAETRNWSKADLLTGCEREGIPAGPIN 324
Query: 61 SISQVFADEHIQ 72
+S+V AD +Q
Sbjct: 325 DLSEVMADPQVQ 336
>gi|76803448|ref|YP_327717.1| crotonobetainyl-CoA:carnitine CoA-transferase /alpha-methylacyl-CoA
racemase 1 [Natronomonas pharaonis DSM 2160]
gi|76559263|emb|CAI50871.1| family 3 CoA transferase [Natronomonas pharaonis DSM 2160]
Length = 404
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 128/290 (44%), Positives = 191/290 (65%), Gaps = 4/290 (1%)
Query: 206 LALSSENP---SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGP 262
+A + NP + PL + +LD +R++ GPFCTM L DLGA+VIK+E+P GD+ R W P
Sbjct: 1 MAGEARNPNGDTGPLDGLTVLDASRVLVGPFCTMQLGDLGADVIKIERPDGGDQTRAWHP 60
Query: 263 PFLNNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLG 322
P ++E S Y+T +NRNK+SV ++ ++ EGQ ++LA + DVLVENF GK++ LG
Sbjct: 61 PTYGDSEESAYYTSINRNKRSVALNLQSDEGQAAFRELAAEADVLVENFRVGKMEEWGLG 120
Query: 323 YKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASI 382
Y+ L+E N +LI+CS++G+G GP KDRP YDI+ + GGL+ ITG +GPP +VG+A
Sbjct: 121 YETLAEENPELIFCSLSGYGEWGPDKDRPAYDIMMQAEGGLMSITGEENGPPVRVGVAIA 180
Query: 383 DLATGLYAHGAVMAALLHK-YKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGT 441
D+ G+YA A++AALLH+ G GQKID +LL QV+ + + + Y G +R G+
Sbjct: 181 DIGAGMYATQAILAALLHRELGDGTGQKIDVSLLDGQVAWMTYMASYYFATGDPPERMGS 240
Query: 442 SHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
H + P+Q F+T++GYV I +GS+ + C ++ + L D R+ T A
Sbjct: 241 KHPTIAPYQAFETADGYVVIASGSEHIWPRFCIAIDREELIDDERFATNA 290
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 62/121 (51%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C ++ + L D R+ T A RVE+R+ L +E + + +TEE L P ++V
Sbjct: 271 FCIAIDREELIDDERFATNAARVEHRDELDPLLEEELRQYSTEEVLARMDEAGVPASKVR 330
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ VF +Q + K +SH GD+++ G + +S T + PP LGEHT+ V +
Sbjct: 331 DMEDVFEHPQVQARGMHKTVSHPTIGDVEMPGSPMHFSETPTSIEKHPPLLGEHTEEVFE 390
Query: 121 D 121
+
Sbjct: 391 E 391
>gi|163854332|ref|YP_001628630.1| acyl-CoA transferase/carnitine dehydratase [Bordetella petrii DSM
12804]
gi|163258060|emb|CAP40359.1| putative acyl-CoA transferase/carnitine dehydratase [Bordetella
petrii]
Length = 389
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 133/286 (46%), Positives = 184/286 (64%), Gaps = 8/286 (2%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE---- 269
S L N+R+LDL+RI+AGP+CT LADLGA+VIKVE+P GD+ RKWGPP+L + +
Sbjct: 3 SRALDNIRVLDLSRILAGPWCTQNLADLGADVIKVERPGQGDDTRKWGPPYLQSRDGQEA 62
Query: 270 LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEI 329
LS YFTC NRNK+S+C+DF P+GQ+ + L CDVLVEN+ G L R L Y L +
Sbjct: 63 LSAYFTCCNRNKRSICLDFSQPQGQRALLKLLATCDVLVENYKSGTLKRYGLDYDSLKAL 122
Query: 330 NSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLA 385
L+Y S+TG+G GP +PGYD I +GGL+ TG DG P + GI +D++
Sbjct: 123 RPDLVYVSITGYGQDGPRAAQPGYDYIFQGMGGLMSHTGIADGEPGAGPLRAGIPVVDIS 182
Query: 386 TGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHAN 445
TG+YA AV+AALL + +TG+G +D LL V++ N GAN+L +G KR G +H N
Sbjct: 183 TGMYATSAVLAALLQRTRTGQGAHLDIALLDVAVAINANQGANFLVSGRNPKRSGNAHPN 242
Query: 446 VVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
+ P++VF +G+ + G+D Q+ C + + LA DPR+ T A
Sbjct: 243 LAPYEVFAARDGFFILAVGNDSQFAKFCALCDEPALAQDPRFATNA 288
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 3/122 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C + + LA DPR+ T A RV+N L + + + W + + VN
Sbjct: 269 FCALCDEPALAQDPRFATNAARVQNMPALRETLSRIIATQDRAYWASGLEAAGIAWGPVN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIV-GPAVAYSLTQPEVRTPPPALGEHTDYVL 119
+ +VFADE ++ ++K SH ++GDI +V P + T P +R PP +GEHT +L
Sbjct: 329 GLDEVFADEQVRHRAMLKHASHPRFGDIPLVRNPMLGREDTSP-MRA-PPLMGEHTREIL 386
Query: 120 KD 121
+
Sbjct: 387 GE 388
>gi|17545515|ref|NP_518917.1| transmembrane protein [Ralstonia solanacearum GMI1000]
gi|17427808|emb|CAD14498.1| putative acyl-coa transferases/carnitine dehydratase transmembrane
protein [Ralstonia solanacearum GMI1000]
Length = 420
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 136/297 (45%), Positives = 191/297 (64%), Gaps = 16/297 (5%)
Query: 209 SSENPSLP-------LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWG 261
S+ P++P LS++R+LDLTR++AGP+C LAD GA+VIKVE+P GD+ R WG
Sbjct: 3 SARVPTMPKRLPMGALSHLRVLDLTRVLAGPWCAQNLADFGADVIKVERPGAGDDTRAWG 62
Query: 262 PPFLNN-----TELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKL 316
PP+L N T + Y+ NRNK+S+ VD TPEGQ+I++ LA DV++EN+ G+L
Sbjct: 63 PPWLRNAAGSDTAEAAYYLAANRNKRSITVDISTPEGQEIVRRLAAHSDVVLENYKVGQL 122
Query: 317 DRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDG 372
+ L Y L + L+YCS+TGFG GPY R GYD I +GG + +TG P G
Sbjct: 123 KKYGLDYDALKAVRPDLVYCSITGFGQTGPYAARAGYDFIVQGMGGFMSLTGERDDLPGG 182
Query: 373 PPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNA 432
P K G+A DL TG+YA AV+AAL H+ +TG+GQ ID LL QV+ML N+ NYL +
Sbjct: 183 GPQKAGVAISDLMTGMYATVAVLAALAHRDRTGEGQYIDMALLDVQVAMLANMNTNYLAS 242
Query: 433 GIEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
G +RWG +H N+VP+Q F+T++G++ + G+D Q++ + LA DPR+ T
Sbjct: 243 GQAPRRWGNAHPNIVPYQTFQTADGWIIVAVGNDGQFRRFVEAGANPELADDPRFAT 299
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 68/131 (51%)
Query: 9 HLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFAD 68
LA DPR+ T RV NR++L + EW+ + P +NS+ +VF +
Sbjct: 290 ELADDPRFATNPQRVANRDVLVPILADMVRRLGKAEWIRRLEAAGVPCGPINSLDEVFDN 349
Query: 69 EHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDET 128
E ++ L ++ H G + +VG V S T P+ PP LGEHT+ VL+D+L+ +
Sbjct: 350 EQVKARGLRVDLPHPSAGTVPLVGSPVRMSATPPQAVAHPPLLGEHTEAVLRDVLDLPQA 409
Query: 129 TIAKLKEKKIL 139
IA L+ + ++
Sbjct: 410 QIAALRAQGVI 420
>gi|421808734|ref|ZP_16244576.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC035]
gi|410415285|gb|EKP67075.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC035]
Length = 405
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 133/284 (46%), Positives = 189/284 (66%), Gaps = 9/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ +T+ +
Sbjct: 4 LNGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPKVGDDTRSWGPPWMKDDSGQDTQEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK SV +D + EGQ++IK L + DV++EN+ G L + L Y+ LS IN
Sbjct: 64 AYYQSTNRNKLSVVIDIASSEGQELIKALIQDTDVVIENYKAGSLKKYGLDYESLSAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TGFG GP + PGYD I +GGL+ +TG P G P KVG+A DLATG
Sbjct: 124 KLVYCSITGFGQTGPRAEEPGYDFIIQGMGGLMSVTGERDDLPGGGPQKVGVAFSDLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL+++ TG GQ ID LL Q++ + N G NYL++G KR+G +HAN+V
Sbjct: 184 LYSTIAIQAALLNRHVTGLGQYIDMALLDVQIATMANQGMNYLSSGNIPKRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P+QVFK S+ I G+D Q+ +C+ + L L D R+ A
Sbjct: 244 PYQVFKASDRDFIIACGNDTQFIQLCRSIGLPDLPNDVRFARNA 287
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 78/140 (55%), Gaps = 2/140 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + L L D R+ A R+++R+ + ++ + KT +EW+ P +N
Sbjct: 268 LCRSIGLPDLPNDVRFARNADRIKHRDEIIGILQTHFLTKTADEWVDAIYAAKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q F + + +++ E++H + +K++G + S T E +T PP LGEHT VL
Sbjct: 328 NLEQAFQEPQVIAREMLVEMNHPQREKLKVIGSPIKLSRTPVEYKTAPPLLGEHTQAVLG 387
Query: 121 DLLNYDETTIAKLKEKKILG 140
+++ ++ +A+LKEK ++G
Sbjct: 388 RMVSSEK--LAELKEKGVIG 405
>gi|421619734|ref|ZP_16060685.1| putative lipid metabolism-related protein [Pseudomonas stutzeri
KOS6]
gi|409778346|gb|EKN58048.1| putative lipid metabolism-related protein [Pseudomonas stutzeri
KOS6]
Length = 407
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 141/294 (47%), Positives = 189/294 (64%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+C +L DLGAEVIKVE+P TGD+ R WGPP+L NT +
Sbjct: 5 LSHIRVLDLSRVLAGPWCGQVLGDLGAEVIKVERPETGDDTRHWGPPYLKDQHGENTSEA 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+S+ VDF PEGQ+II++L Q DVL+ENF G L L Y+ L IN
Sbjct: 65 AYYLTANRNKQSLTVDFTRPEGQRIIRELVTQSDVLLENFKVGGLAAYGLDYQSLKAINP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG D P KVG+A D+ TG
Sbjct: 125 RLIYCSITGFGQDGPYASRAGYDFMIQGLGGLMSLTGRSDAEEGAGPVKVGVALTDILTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA V+AAL H+ +G+GQ ID LL QV+ L N NYL G+ KR G +H N+V
Sbjct: 185 LYAAVGVLAALAHREHSGEGQHIDTALLDVQVACLGNQALNYLTTGVAPKRMGNAHPNIV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + + G+D Q++ C+V A DPR+ T +A + LI
Sbjct: 245 PYQDFPTADGDIILTVGNDGQFRKFCEVAGHAEWAADPRFATNRARVAHRAELI 298
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 73/139 (52%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V A DPR+ T RV +R L I T+ +TT EW+ + P +N
Sbjct: 269 FCEVAGHAEWAADPRFATNRARVAHRAELIPLIRQVTVFRTTAEWVRALEQAGVPCGPIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD +Q L ++ H G + +V + S + + R PPP LGEH++ +L+
Sbjct: 329 DLAQVFADPQVQQRALKIDMPHPLSGTVPLVASPLRLSASPVDYRNPPPLLGEHSEALLQ 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
LL ++ IA+L++ ++
Sbjct: 389 RLLGMNDEQIARLRQAGVI 407
>gi|421889017|ref|ZP_16320082.1| putative Formyl-CoA transferase, CaiB/BaiF family [Ralstonia
solanacearum K60-1]
gi|378965624|emb|CCF96830.1| putative Formyl-CoA transferase, CaiB/BaiF family [Ralstonia
solanacearum K60-1]
Length = 406
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 133/282 (47%), Positives = 186/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDLTR++AGP+C LAD GA+VIKVE+P GD+ R WGPP+L N+T +
Sbjct: 4 LSHLRVLDLTRVLAGPWCAQNLADFGADVIKVERPGAGDDTRAWGPPWLKDAAGNDTAEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+S+ +D TPEGQ I++ LA DV++EN+ G+L + L Y+ L +
Sbjct: 64 AYYLAANRNKRSITLDISTPEGQDIVRRLAAHSDVVLENYKVGQLKKYGLDYEALKAVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCS+TGFG GPY R GYD I +GG + +TG P G P K G+A DL TG
Sbjct: 124 DLVYCSITGFGQTGPYAARAGYDFIVQGMGGFMSLTGERDDLPGGGPQKAGVAISDLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA AV+AAL H+ +TG+GQ ID LL QV+ML N+ NYL +G +RWG +H N+V
Sbjct: 184 MYATVAVLAALAHRDRTGEGQYIDMALLDVQVAMLANMNTNYLASGQAPRRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+T++G++ + G+D Q++ L LA DPR+ T
Sbjct: 244 PYQTFQTADGWIIVAVGNDGQFRRFVDAGGLPELADDPRFAT 285
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 68/134 (50%)
Query: 6 NLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQV 65
L LA DPR+ T RV NR++L + EW+ + P +N++ +V
Sbjct: 273 GLPELADDPRFATNPRRVANRDVLVPILAGMVRRLGKAEWIERLEAAGVPCGPINTLDEV 332
Query: 66 FADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNY 125
F +E I+ L ++ H G + +VG V S T P PP LGEHT+ VL+D+L+
Sbjct: 333 FDNEQIKARGLRVDLPHPSAGAVPLVGSPVRMSATPPRAVAHPPLLGEHTEAVLRDVLDL 392
Query: 126 DETTIAKLKEKKIL 139
+T I L+ + ++
Sbjct: 393 PQTQIDALRAQGVI 406
>gi|319943207|ref|ZP_08017490.1| formyl-CoA transferase [Lautropia mirabilis ATCC 51599]
gi|319743749|gb|EFV96153.1| formyl-CoA transferase [Lautropia mirabilis ATCC 51599]
Length = 411
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 132/282 (46%), Positives = 185/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+RI+AGP+ +LADLGA+VIKVE+P GD+ R WGPP++ +T ++
Sbjct: 10 LSHIRVLDLSRILAGPWAGQILADLGADVIKVERPGPGDDTRGWGPPWIKDDQGQDTSVA 69
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ C NRNK+S+ VD PEGQ I++ LA + DV++ENF G L + L Y L +N
Sbjct: 70 AYYLCANRNKRSITVDITQPEGQDIVRRLAAKSDVVLENFKLGGLKQYGLDYDSLKAVNP 129
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+L+YCS+TGFG GPY R GYD + +GGL+ ITG PDG P KVG+A D+ TG
Sbjct: 130 RLVYCSITGFGQDGPYAPRAGYDFLIQGLGGLMSITGRPDGEPGAGPMKVGVALTDILTG 189
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA AV+AAL + ++G+GQ ID LL QV+ L N NYL G +R G +H ++V
Sbjct: 190 LYATNAVLAALAWREQSGEGQYIDMALLDVQVACLANQAMNYLATGNSPRRMGNAHPSIV 249
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F T++G++ + G+D Q+ C+V LA D R+ T
Sbjct: 250 PYQDFPTADGHMILAIGNDGQFARFCEVAGRPELAADVRFAT 291
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 1/139 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V LA D R+ T RVENR L + T +TT EW+ + + P +N
Sbjct: 274 FCEVAGRPELAADVRFATNRARVENRAELIPLLNEITATRTTAEWIGQLEARAVPCGPIN 333
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+++VFAD +Q L + H + G++ +V + S T E R PP +GEHTD +L
Sbjct: 334 GLAEVFADPQVQARGLAVTLPHPEAGEVPLVASPIRLSKTPVEYRRAPPLVGEHTDEILA 393
Query: 121 DLLNYDETTIAKLKEKKIL 139
D L D IA L+E+ ++
Sbjct: 394 D-LGVDAAGIAGLRERGVV 411
>gi|452879192|ref|ZP_21956324.1| hypothetical protein G039_22322 [Pseudomonas aeruginosa VRFPA01]
gi|452184216|gb|EME11234.1| hypothetical protein G039_22322 [Pseudomonas aeruginosa VRFPA01]
Length = 407
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 133/282 (47%), Positives = 187/282 (66%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIK+E+P +GD+ R WGPPFL N+T +
Sbjct: 5 LSHIRVLDLSRVLAGPWAGQILADLGAEVIKIERPGSGDDTRAWGPPFLKDAEGNDTGEA 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNKKSV VDF PEGQ+I+++LA + D+L+ENF G L L Y+ L ++N
Sbjct: 65 AYYLSANRNKKSVTVDFTQPEGQRIVRELAAKADILLENFKVGGLKAYCLDYESLKQVNP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG D P KVG+A D+ TG
Sbjct: 125 KLIYCSITGFGQSGPYAKRAGYDFMIQGLGGLMSLTGRADNEEGAGPVKVGVALTDILTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ AV+AAL H+ +G GQ ID LL QV+ L N NYL G+ +R G +H N+V
Sbjct: 185 LYSSTAVLAALAHRDVSGIGQHIDMALLDVQVACLANQTLNYLTTGVPPRRLGNAHPNIV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F T++G + + G+D Q++ ++ + A DPR+ T
Sbjct: 245 PYQDFPTADGDMILTVGNDSQFRKFAELADHPEWADDPRFAT 286
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 70/129 (54%)
Query: 11 ALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEH 70
A DPR+ T RV NRE+L I T+ +T EW+L + P +N ++QVFAD
Sbjct: 279 ADDPRFATNKARVANREVLIPLIRQATVLHSTAEWILSLERAGVPCGPINDLAQVFADPQ 338
Query: 71 IQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETTI 130
+Q L E+ H G + V + S T E R PPP LG+HTD VL+ LL D +
Sbjct: 339 VQARGLRVELPHPLGGTVPQVASPIRLSETPVEYRNPPPTLGQHTDEVLETLLGLDAAAL 398
Query: 131 AKLKEKKIL 139
+L++ K++
Sbjct: 399 ERLRDGKVI 407
>gi|169768954|ref|XP_001818947.1| CAIB/BAIF family enzyme [Aspergillus oryzae RIB40]
gi|238501380|ref|XP_002381924.1| CAIB/BAIF family enzyme [Aspergillus flavus NRRL3357]
gi|83766805|dbj|BAE56945.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220692161|gb|EED48508.1| CAIB/BAIF family enzyme [Aspergillus flavus NRRL3357]
gi|391863784|gb|EIT73083.1| putative L-carnitine dehydratase/alpha-methylacyl-CoA racemase
[Aspergillus oryzae 3.042]
Length = 447
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 131/284 (46%), Positives = 189/284 (66%), Gaps = 8/284 (2%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELS-- 271
+LPL VR+LD+TR++AGP+CT +L DLGA+VIK+E PV GD+ R WGPP+ + S
Sbjct: 42 TLPLKGVRVLDMTRVLAGPYCTQILGDLGADVIKIEHPVRGDDTRAWGPPYAKYQDESRQ 101
Query: 272 -----TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHL 326
Y+ VNRNKKS+ + F+ G +I+ LAK+CDVLVEN++PG L + N+ Y+ L
Sbjct: 102 GPGESAYYLGVNRNKKSLGLSFQHKSGVEILHRLAKECDVLVENYLPGSLKKYNMDYETL 161
Query: 327 SEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLAT 386
EIN +LIY S+TG+G GPY +R GYD++ + GL+HITG G P KVG+A DL T
Sbjct: 162 REINPKLIYASITGYGQTGPYSNRAGYDVMVEAEMGLMHITGARGGDPVKVGVAVTDLTT 221
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAG-IEGKRWGTSHAN 445
GLY A+MAALL + +TG GQ ID L QV+ L N+ ++ L +G + RWGT+H +
Sbjct: 222 GLYTSNAIMAALLARVRTGMGQHIDACLSDCQVATLANIASSALISGEKDTGRWGTAHPS 281
Query: 446 VVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+VP++ ++T +G + G G+D+ + +C + DPR++T
Sbjct: 282 IVPYRSYQTLDGDILFGGGNDRLFGVLCDRLGHPEWKTDPRFVT 325
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 81/139 (58%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + DPR++T + RV+NR + IE K +KTT+EWL I +G PYA VN
Sbjct: 308 LCDRLGHPEWKTDPRFVTNSDRVKNRGEIDGLIEEKVKQKTTQEWLEILEGSGMPYAAVN 367
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I H+Q +V E+ H G IK+V + YS P VRTPPP LG+HTD +L+
Sbjct: 368 DIQGTLNHSHVQARGMVTEVDHPACGPIKLVNTPIKYSHATPGVRTPPPTLGQHTDEILE 427
Query: 121 DLLNYDETTIAKLKEKKIL 139
++L Y + IA+LK+ ++
Sbjct: 428 EILEYGKDDIARLKQDGVV 446
>gi|325087571|gb|EGC40881.1| CAIB/BAIF family enzyme [Ajellomyces capsulatus H88]
Length = 451
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 131/303 (43%), Positives = 195/303 (64%), Gaps = 8/303 (2%)
Query: 198 YENFYSLDLALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDEC 257
+ +F + + +LPL+ +R+LD++R++AGP+CT +L DLGAEVIK+E P GD+
Sbjct: 30 WRSFVTAATTTAQSIDNLPLAGIRVLDMSRVLAGPYCTQILGDLGAEVIKIEHPTRGDDT 89
Query: 258 RKWGPPF----LNNTE---LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVEN 310
R WGPPF ++ E S Y+ VNRNKKS+ + F P G +I+ L K+CD+LVEN
Sbjct: 90 RAWGPPFAKYKVDGKEGPGESAYYLSVNRNKKSLGLSFAHPSGIEILHKLVKECDILVEN 149
Query: 311 FVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHP 370
++PG L + + Y + IN +LIY S+TG+G GPY R GYD++ + GL+HITG
Sbjct: 150 YIPGSLKKYKMDYDTVKVINPKLIYASITGYGQTGPYSQRAGYDVMVEAEMGLMHITGSR 209
Query: 371 DGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYL 430
DGPP KVG+A DL TGLY A+MAALL + KT KGQ ID L QV+ L N+ ++ L
Sbjct: 210 DGPPVKVGVAVTDLTTGLYTSNAIMAALLARAKTAKGQHIDACLSDCQVATLSNLASSAL 269
Query: 431 NAG-IEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+G + RWGT+H ++VP++ ++T +G + +G G+DK + +C + +D R+++
Sbjct: 270 ISGEKDSGRWGTAHPSIVPYRAYETKDGDILLGGGNDKLFGLLCDGLGQPEWKVDERFVS 329
Query: 490 GAL 492
L
Sbjct: 330 NNL 332
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 87/139 (62%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + +D R+++ LRV+NRE+L K IE KT +KTT+EWL IF+G PY+ +N
Sbjct: 312 LCDGLGQPEWKVDERFVSNNLRVKNREVLDKMIENKTKQKTTQEWLEIFEGSGMPYSAIN 371
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I + H+ +V EI H G IK+V V +S +P +RT PP LG+H+D VL+
Sbjct: 372 DIQGTLNNPHVLARGMVVEIEHPSCGPIKLVNTPVKFSDAKPGIRTSPPMLGQHSDEVLR 431
Query: 121 DLLNYDETTIAKLKEKKIL 139
DL+ E IA+LKE+KI+
Sbjct: 432 DLVGLGEDKIAQLKEQKIV 450
>gi|412339763|ref|YP_006968518.1| hypothetical protein BN112_2461 [Bordetella bronchiseptica 253]
gi|408769597|emb|CCJ54378.1| conserved hypothetical protein [Bordetella bronchiseptica 253]
Length = 408
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 132/286 (46%), Positives = 181/286 (63%), Gaps = 9/286 (3%)
Query: 213 PSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NN 267
P+ PL R+LDLTR++AGP+CT LADLGAEVIKVE+P GDE R WGPP++ +
Sbjct: 2 PNKPLQKYRVLDLTRVLAGPWCTQNLADLGAEVIKVERPGVGDETRGWGPPWIPAGKASK 61
Query: 268 TELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLS 327
S YF NR KKS+ +DF T +GQ +++ LA CDVLVEN+ G L R LGY+ L
Sbjct: 62 RRDSAYFGSANRGKKSITIDFTTAQGQALVRQLAADCDVLVENYKTGTLARYGLGYEDLK 121
Query: 328 EINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASID 383
+N L+YCSVTGFG GPY+ +PGYD + ++ GL+ ITG P G P KVGIA D
Sbjct: 122 AVNPGLVYCSVTGFGHTGPYRHKPGYDFVFQAMSGLMSITGERDDLPGGGPQKVGIAVAD 181
Query: 384 LATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSH 443
+ TG+Y+ AV+AALL + G+GQ +D LL ++ N NY+ +G +R+G +H
Sbjct: 182 ITTGMYSTVAVLAALLERESHGRGQHLDMALLDCAMAFNSNQAVNYMASGSMPRRYGNAH 241
Query: 444 ANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+N VP+QVF T +G + + G+D + C+ L D R++T
Sbjct: 242 SNAVPYQVFDTRDGQIVVAVGNDALFAAYCRAAQRPDLCADARFVT 287
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 65/138 (47%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C+ L D R++T + R++NR+ L ++ KT+ +WL + P A +N
Sbjct: 271 CRAAQRPDLCADARFVTVSGRLQNRDELLSQLAVVMAGKTSAQWLAVLDAAGVPCAPIND 330
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
Q AD ++ + I+ E + + + +S T + PP LG+HT VL++
Sbjct: 331 FEQALADPQVKARNIETHIALEDGAVFRTIASPLRFSETPLDHLAGPPMLGQHTADVLRE 390
Query: 122 LLNYDETTIAKLKEKKIL 139
L DE A L++ ++
Sbjct: 391 RLGLDEAQQAGLRQAGVI 408
>gi|50084839|ref|YP_046349.1| L-carnitine dehydrogenase [Acinetobacter sp. ADP1]
gi|49530815|emb|CAG68527.1| L-carnitine dehydrogenase [Acinetobacter sp. ADP1]
Length = 405
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 135/284 (47%), Positives = 186/284 (65%), Gaps = 9/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L R+LDL+R++AGP+C +LADLGAEVIKVE+P GD+ R WGPP++ +T +
Sbjct: 4 LEGFRVLDLSRVLAGPWCGQVLADLGAEVIKVERPKHGDDTRAWGPPWMKDDEGRDTHEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK SV +D TPEGQ+I++ LA + DVL+EN+ G L + L Y+ LS++N
Sbjct: 64 AYYQSTNRNKLSVAIDISTPEGQEIVRALALESDVLIENYKSGSLKKYGLDYETLSKLNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TGFG GP PGYD I +GGL+ +TG P G P K+GIA D+ATG
Sbjct: 124 KLVYCSITGFGQTGPRAQEPGYDFIIQGMGGLMSVTGEKDDLPGGGPQKLGIAFSDIATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL++ TG GQ ID LL Q++ L N G NYL +G R+G +HAN+V
Sbjct: 184 LYSTIAIQAALLNRNITGLGQYIDMALLDVQIATLANQGMNYLASGKVPGRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P+QVFK S+ I G+D Q+ +C+ + L L DP++ A
Sbjct: 244 PYQVFKASDRDFIIACGNDTQFIQLCQAIGLPELPNDPKFTRNA 287
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 78/140 (55%), Gaps = 2/140 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + L L DP++ A R++ RE + + + KT +EW+ I Q P +N
Sbjct: 268 LCQAIGLPELPNDPKFTRNADRIKYREEIIHLLSTHFLTKTADEWVGIIQAAKVPVGCIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q F + + + K++ ++SH + +K++G + S T E + PP LG+HT+ +L
Sbjct: 328 NLEQAFEEPQVIERKMLVDMSHPQREHLKVIGSPIKMSRTPVEYKNAPPMLGQHTEEILS 387
Query: 121 DLLNYDETTIAKLKEKKILG 140
++L+ + ++LK K I+G
Sbjct: 388 NILSRER--FSELKSKGIIG 405
>gi|328872630|gb|EGG20997.1| CoA-transferase family III protein [Dictyostelium fasciculatum]
Length = 435
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 126/267 (47%), Positives = 185/267 (69%), Gaps = 5/267 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL---NNTELST 272
PL+ +ILD++R++AGP+CT L DLGA+VIK+E P GD+ R+WGPPF N +
Sbjct: 6 PLNGFKILDMSRVLAGPWCTQTLGDLGADVIKIEHP-HGDDTRQWGPPFYKDPNGNIQTA 64
Query: 273 YFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQ 332
YF C NRNK+S+ +D +GQ++I +LAK+CDV++ENF G L + NL Y+ LS IN +
Sbjct: 65 YFACTNRNKRSIAIDISKDQGQKVIHNLAKECDVVIENFKSGSLKKYNLDYQSLSHINPK 124
Query: 333 LIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHG 392
++YCS+TGFG GP KD PGYD ++GGL+ ITG D P KVG+A +DL TG+YA+
Sbjct: 125 IVYCSITGFGLTGPLKDLPGYDFAIQAMGGLMSITGSED-QPYKVGVAVVDLMTGMYANV 183
Query: 393 AVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVF 452
A+ AAL H+ +TG+GQ ID +LL Q + L N+ +++L G + KR G SH ++ P+
Sbjct: 184 AIQAALHHRNQTGRGQHIDISLLEVQAAFLANIASSHLVTGNDPKRIGNSHPSISPYDSV 243
Query: 453 KTSNGYVTIGTGSDKQYQDMCKVMNLQ 479
KTS+G++ + G+D Q++ +C + L+
Sbjct: 244 KTSDGFIVLAVGNDSQFKSLCLTLGLE 270
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 67/158 (42%), Gaps = 33/158 (20%)
Query: 14 PRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEHIQD 73
P +L+ + RV NR L I K+ TT++ ++ + P + VN +SQV++ I
Sbjct: 278 PLFLSNSDRVANRPQLLHLITEKSQLWTTDQLVVSLGKANVPCSPVNKLSQVYSHPQIVS 337
Query: 74 IKLVKEISHEK----------------------------YGDIKIVGPAVAYSLTQPEV- 104
LV +I +K ++ VG + +S T
Sbjct: 338 RGLVWDIPLKKEEEGEGGNNNVEKQEKEKIVTNDGKYYNLDTLRTVGSPIHFSETNLHTD 397
Query: 105 ---RTPPPALGEHTDYVLKDLLNYDETTIAKLKEKKIL 139
TPPP LG+HT + + L Y + I KLK+ KI+
Sbjct: 398 DKQNTPPPTLGQHTIEICQQ-LGYTKDEIDKLKDSKII 434
>gi|33599970|ref|NP_887530.1| hypothetical protein BB0982 [Bordetella bronchiseptica RB50]
gi|33567568|emb|CAE31481.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
Length = 408
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 132/286 (46%), Positives = 181/286 (63%), Gaps = 9/286 (3%)
Query: 213 PSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NN 267
P+ PL R+LDLTR++AGP+CT LADLGAEVIKVE+P GDE R WGPP++ +
Sbjct: 2 PNKPLQKYRVLDLTRVLAGPWCTQNLADLGAEVIKVERPGVGDETRGWGPPWIPAGAASK 61
Query: 268 TELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLS 327
S YF NR KKS+ +DF T +GQ +++ LA CDVLVEN+ G L R LGY+ L
Sbjct: 62 RRDSAYFGSANRGKKSITIDFTTAQGQALVRQLAADCDVLVENYKTGTLARYGLGYEDLK 121
Query: 328 EINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASID 383
+N L+YCSVTGFG GPY+ +PGYD + ++ GL+ ITG P G P KVGIA D
Sbjct: 122 AVNPGLVYCSVTGFGHTGPYRHKPGYDFVFQAMSGLMSITGERDDLPGGGPQKVGIAVAD 181
Query: 384 LATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSH 443
+ TG+Y+ AV+AALL + G+GQ +D LL ++ N NY+ +G +R+G +H
Sbjct: 182 ITTGMYSTVAVLAALLERESHGRGQHLDMALLDCAMAFNSNQAVNYMASGSMPRRYGNAH 241
Query: 444 ANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+N VP+QVF T +G + + G+D + C+ L D R++T
Sbjct: 242 SNAVPYQVFDTRDGQIVVAVGNDALFAAYCRAAQRPDLCADARFVT 287
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 65/138 (47%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C+ L D R++T + R++NR+ L ++ KT+ +WL + P A +N
Sbjct: 271 CRAAQRPDLCADARFVTVSGRLQNRDELLSQLAVVMAGKTSAQWLAVLDAAGVPCAPIND 330
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
Q AD ++ + I+ E + + + +S T + PP LG+HT VL++
Sbjct: 331 FEQALADPQVKARNIETHIALEDGAVFRTIASPLRFSETPLDHLAGPPTLGQHTADVLRE 390
Query: 122 LLNYDETTIAKLKEKKIL 139
L DE A L++ ++
Sbjct: 391 RLGLDEAQQAGLRQAGVI 408
>gi|156740577|ref|YP_001430706.1| formyl-CoA transferase [Roseiflexus castenholzii DSM 13941]
gi|156231905|gb|ABU56688.1| Formyl-CoA transferase [Roseiflexus castenholzii DSM 13941]
Length = 396
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 131/287 (45%), Positives = 184/287 (64%), Gaps = 2/287 (0%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTY 273
+LPL +R+LDL+R +AGPFC+M+L DLGA++IKVEQP GD R WGPPF STY
Sbjct: 2 TLPLEGLRVLDLSRALAGPFCSMMLGDLGADIIKVEQPGIGDHTRAWGPPFEGGE--STY 59
Query: 274 FTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQL 333
F VNRNK+S+ +DF+ G +++ L DVL+ENFVPG LDR GY+ I L
Sbjct: 60 FLSVNRNKRSLALDFRNERGAAVLRRLIASSDVLLENFVPGTLDRRGFGYEACRAIRPDL 119
Query: 334 IYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGA 393
+YCS++GFG GP ++R YD IA +GGL+ + G P GPP +VGIA D+ G++A A
Sbjct: 120 VYCSISGFGQTGPDRERAAYDQIAQGLGGLMSLIGEPGGPPMRVGIAITDIMAGMFAAYA 179
Query: 394 VMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFK 453
++AAL H+ +TG+GQ +D +LL Q++ML NY G R G H ++VP+ V++
Sbjct: 180 ILAALYHRARTGEGQWVDTSLLEGQLAMLTYQAGNYFATGRAPDRPGNQHPSIVPYGVYR 239
Query: 454 TSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHL 500
++GY T+G G+D ++ C + L L DPR+ T LA + L
Sbjct: 240 AADGYFTLGVGTDDLWERFCDALELTALRNDPRFRTNVSRLAHRAEL 286
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 63/139 (45%), Gaps = 1/139 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C + L L DPR+ T R+ +R L +E + P V
Sbjct: 258 FCDALELTALRNDPRFRTNVSRLAHRAELNALLEPVFASLRVADVERHLNAAGVPCGAVR 317
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVF D +Q + V I H G I++V P +S T P +R PP LG+HTD +L
Sbjct: 318 DLAQVFTDPQVQALGSVVTIDHPTAGSIRVVAPPYHFSATPPAIRRSPPLLGQHTDEILA 377
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ + Y+ IA L+ ++
Sbjct: 378 E-IGYEPHEIATLRSAGVV 395
>gi|260553823|ref|ZP_05826092.1| L-carnitine dehydrogenase [Acinetobacter sp. RUH2624]
gi|260405033|gb|EEW98534.1| L-carnitine dehydrogenase [Acinetobacter sp. RUH2624]
Length = 409
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 131/281 (46%), Positives = 183/281 (65%), Gaps = 9/281 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ N T S
Sbjct: 4 LQGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPRVGDDTRMWGPPWMPDQDGNMTRES 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF C NRNK SV VD TPEGQ +I ++AK DV++EN+ G L + L Y LSE+N
Sbjct: 64 GYFQCTNRNKYSVAVDITTPEGQAVIYEIAKTADVVIENYKTGSLAKYGLDYASLSELNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
++YCS+TGFG GP + PGYD I + GL+ ITG PD G KVG+A +D+ TG
Sbjct: 124 NIVYCSITGFGQDGPRAEEPGYDFIIQGMSGLMSITGEPDDVAGGGAQKVGVAVVDIQTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AAL+ + +TG+GQ ID +LL QV+ L N G NYL +G +R G H ++V
Sbjct: 184 LYSTIAIQAALIARSQTGRGQYIDMSLLDVQVAALANQGMNYLASGKAPQRMGNQHPSIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYL 488
P+Q FK + I G+DKQ++D+C + L + +++
Sbjct: 244 PYQTFKAKDKEFIIACGNDKQFKDLCVAIGYPELLENEKFV 284
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 2/139 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L + +++ RV+ R+ L + ++KT +EW+ + + P +N
Sbjct: 268 LCVAIGYPELLENEKFVRNQDRVKYRDELIPLLSEHFLQKTAKEWVDMIHALKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI A+ I LV I H + + +G + S T E PP LGEHT +L
Sbjct: 328 SIEDALAEPQIVHRNLVVNIPHRLNENFQTIGSPIKLSDTPVEYHHAPPELGEHTAQILS 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+E +A LKEK I+
Sbjct: 388 RFKTAEE--LAALKEKGII 404
>gi|299770630|ref|YP_003732656.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
oleivorans DR1]
gi|298700718|gb|ADI91283.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
oleivorans DR1]
Length = 405
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 132/284 (46%), Positives = 189/284 (66%), Gaps = 9/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ +T+ +
Sbjct: 4 LNGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPKVGDDTRSWGPPWMKDDSGQDTQEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK SV +D + +GQ++IK L + DV++EN+ G L + L Y+ LS IN
Sbjct: 64 AYYQSTNRNKLSVAIDIASSDGQELIKALIQDTDVVIENYKAGSLKKYGLDYESLSAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TGFG GP + PGYD I +GGL+ +TG P G P KVG+A DLATG
Sbjct: 124 KLVYCSITGFGQNGPRAEEPGYDFIIQGMGGLMSVTGERDDLPGGGPQKVGVAFSDLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL+++ TG GQ ID LL Q++ + N G NYL++G KR+G +HAN+V
Sbjct: 184 LYSTIAIQAALLNRHVTGLGQYIDMALLDVQIATMANQGMNYLSSGNIPKRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P+QVFK S+ I G+D Q+ +C+ + L L D R+ A
Sbjct: 244 PYQVFKASDRDFIIACGNDTQFIQLCRSIGLPDLPNDARFARNA 287
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 78/140 (55%), Gaps = 2/140 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + L L D R+ A R+++R+ + ++ + KT +EW+ P +N
Sbjct: 268 LCRSIGLPDLPNDARFARNADRIKHRDEIIGILQTHFLTKTADEWVDAIYAAKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q F + + +++ E++H + +K++G + S T E +T PP LGEHT VL
Sbjct: 328 NLEQAFQEPQVIAREMLVEMNHPQREKLKVIGSPIKLSRTPVEYKTAPPLLGEHTQAVLG 387
Query: 121 DLLNYDETTIAKLKEKKILG 140
+++ ++ +A+LKEK ++G
Sbjct: 388 RVVSSEK--LAELKEKGVIG 405
>gi|293608477|ref|ZP_06690780.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|427422821|ref|ZP_18912995.1| CoA-transferase family III protein [Acinetobacter baumannii WC-136]
gi|292829050|gb|EFF87412.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|425700456|gb|EKU70039.1| CoA-transferase family III protein [Acinetobacter baumannii WC-136]
Length = 405
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 132/284 (46%), Positives = 189/284 (66%), Gaps = 9/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ +T+ +
Sbjct: 4 LNGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPKVGDDTRSWGPPWMKDDSGQDTQEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK SV +D + +GQ++IK L + DV++EN+ G L + L Y+ LS IN
Sbjct: 64 AYYQSTNRNKLSVAIDIASSDGQELIKALIQDTDVVIENYKAGSLKKYGLDYESLSAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TGFG GP + PGYD I +GGL+ +TG P G P KVG+A DLATG
Sbjct: 124 KLVYCSITGFGQTGPRAEEPGYDFIIQGMGGLMSVTGERDDLPGGGPQKVGVAFSDLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL+++ TG GQ ID LL Q++ + N G NYL++G KR+G +HAN+V
Sbjct: 184 LYSTIAIQAALLNRHVTGLGQYIDMALLDVQIATMANQGMNYLSSGNIPKRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P+QVFK S+ I G+D Q+ +C+ + L L D R+ A
Sbjct: 244 PYQVFKASDRDFIIACGNDTQFIQLCRSIGLPDLPNDARFARNA 287
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 78/140 (55%), Gaps = 2/140 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + L L D R+ A R+++R+ + ++ + KT +EW+ P +N
Sbjct: 268 LCRSIGLPDLPNDARFARNADRIKHRDEIIGILQTHFLTKTADEWVDAIYAAKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q F + + +++ E++H + +K++G + S T E +T PP LGEHT VL
Sbjct: 328 NLEQAFQEPQVIAREMLVEMNHPQREKLKVIGSPIKLSRTPVEYKTAPPLLGEHTQAVLG 387
Query: 121 DLLNYDETTIAKLKEKKILG 140
+++ ++ +A+LKEK ++G
Sbjct: 388 RVVSSEK--LAELKEKGVIG 405
>gi|339323722|ref|YP_004682616.1| acyl-CoA transferase/carnitine dehydratase [Cupriavidus necator
N-1]
gi|338170330|gb|AEI81384.1| acyl-CoA transferase/carnitine dehydratase [Cupriavidus necator
N-1]
Length = 387
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 134/284 (47%), Positives = 180/284 (63%), Gaps = 11/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE------- 269
L VR+LDL+RI+AGP+CT LADLGAEV KVE P GD+ R WGPP+L E
Sbjct: 6 LEGVRVLDLSRILAGPWCTQNLADLGAEVTKVEHPERGDDTRGWGPPYLEAPEGSGDTQR 65
Query: 270 LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEI 329
LS YF C NR K+SV +D+ TPEG +++LA++ DVLVEN+ G L R L Y L I
Sbjct: 66 LSGYFICCNRGKRSVAIDYGTPEGAAQVRELAREADVLVENYKVGTLRRYGLDYDTLKAI 125
Query: 330 NSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLA 385
N +L+Y S+TGFG GP D+PGYD + +GGL+ TG PDG P + G+A +DL+
Sbjct: 126 NPRLVYLSITGFGQSGPMADKPGYDYVFQGMGGLMSYTGQPDGTPGAGPLRTGVAVVDLS 185
Query: 386 TGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHAN 445
TG+YA AV+AAL + TG G +D LL V++ N ANYL +G +R G +H N
Sbjct: 186 TGMYATSAVLAALYQRQATGLGAHLDIALLDVAVAINANQAANYLVSGQNPQRSGNAHPN 245
Query: 446 VVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P++VF+ ++G++ + G+D Q+ C V + LA DPRY T
Sbjct: 246 CAPYEVFRCADGHLILAIGNDSQFARFCAVAGMPDLAQDPRYAT 289
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 41/91 (45%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C V + LA DPRY T + R+E+ L + +T W F P+ ++
Sbjct: 272 FCAVAGMPDLAQDPRYATNSARIEHLPALRAVLTDLFPTRTRAAWTDAFDAAGVPWGPIH 331
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIV 91
++ +VFA +Q L++ H G + +V
Sbjct: 332 TMDEVFAHPQVQHRGLMQVAEHPVMGKVPMV 362
>gi|84516880|ref|ZP_01004238.1| CAIB/BAIF family protein [Loktanella vestfoldensis SKA53]
gi|84509348|gb|EAQ05807.1| CAIB/BAIF family protein [Loktanella vestfoldensis SKA53]
Length = 393
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 133/279 (47%), Positives = 178/279 (63%), Gaps = 6/279 (2%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTG-DECRKWGPPFLNNT-----EL 270
L +R+LDLTRI+AGP CT LL DLGAEVIK+E P TG D+ R WGPP + +T +L
Sbjct: 5 LDGIRVLDLTRILAGPTCTQLLGDLGAEVIKIENPATGGDDTRGWGPPNVCDTNGQPTDL 64
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
S YF NRNKKSV +D T GQQ ++ LA+ DV+VENF PG L + LG L
Sbjct: 65 SAYFMAANRNKKSVSIDISTELGQQQVRALARSADVVVENFKPGGLAKYGLGPDDLLTRQ 124
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYA 390
LIYCS++GFG GP +D+PGYD++A GG++ +TG PDG P KVG+ D+ G+YA
Sbjct: 125 PGLIYCSISGFGQTGPNRDKPGYDLMAQGFGGIMSLTGEPDGAPMKVGVGVADVMCGMYA 184
Query: 391 HGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQ 450
++AAL HK TG+GQ ID L+ +Q++ LIN G NYL +G +R G H N+VP+
Sbjct: 185 TVGILAALRHKEHTGEGQHIDIALVDSQLAWLINEGTNYLESGDLPQRRGNGHPNIVPYH 244
Query: 451 VFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
VF ++G+ I G+D Q+ C + + D R+ T
Sbjct: 245 VFAVADGHAIIAVGNDSQFARFCDFLGCADIVTDARFAT 283
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 49/124 (39%), Gaps = 2/124 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C + + D R+ T R +NR+ L I + + + + P VN
Sbjct: 266 FCDFLGCADIVTDARFATNLARTQNRDALLAVIGPRLAARPLAAVIAGLEARKVPVGPVN 325
Query: 61 SISQVFADEHIQDIKLVKEISHE--KYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
+I + Q +V + + G ++++G + S T R PPP G+ ++ +
Sbjct: 326 TIDLALGSDQAQARDMVVAMPRVDVQKGQVRLLGNPLKLSRTPVTYRLPPPHCGQDSEEI 385
Query: 119 LKDL 122
L L
Sbjct: 386 LAQL 389
>gi|163855461|ref|YP_001629759.1| hypothetical protein Bpet1155 [Bordetella petrii DSM 12804]
gi|163259189|emb|CAP41489.1| unnamed protein product [Bordetella petrii]
Length = 428
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 130/283 (45%), Positives = 184/283 (65%), Gaps = 9/283 (3%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL----- 270
PLS++R+LDL+RI+AGP+ T LADLGAEVIKVE+P GD+ R+ GPPFL + +
Sbjct: 26 PLSHIRVLDLSRILAGPWATQNLADLGAEVIKVEKPDVGDDTRQMGPPFLKDRQSGENGD 85
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
+ YF NR KKS+ +DF P GQ+I+++LA++ DV VEN+ G L R L Y L EIN
Sbjct: 86 AAYFMSCNRGKKSLAIDFSNPRGQEILRELARKADVFVENYKVGALKRYGLDYASLREIN 145
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLAT 386
QL+YCSVTGFG GPYKDR GYD + +GGL+ +TG P G P + G+A DL
Sbjct: 146 PQLVYCSVTGFGQTGPYKDRAGYDYLIQGMGGLMSVTGERDDLPGGGPQRAGVAVADLLA 205
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANV 446
G+YA A++AAL H+ + GQ ID +LL V L+N NYL +G +R G+ H N+
Sbjct: 206 GMYATTAILAALQHRDRGHGGQHIDISLLDCMVGSLVNQSMNYLVSGRVPQRMGSGHPNI 265
Query: 447 VPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+ V+ ++G++ + G+D Q++ +C+ + + DPR+ T
Sbjct: 266 APYAVYPAADGHLVLAVGNDTQFRRLCQAVGQPEIGTDPRFAT 308
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + + DPR+ T A RV NR L + T + +W + + P +N
Sbjct: 291 LCQAVGQPEIGTDPRFATIADRVHNRAELDAWLVPVTRSRRLADWTALLERAQVPGGPIN 350
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ QVFADEH+ + E+ H YG + V + +S T + PP+LG+H + VL+
Sbjct: 351 GMDQVFADEHVVARGMRAELEHPLYGPVPTVRNPIRFSETPLDPAGAPPSLGQHNEEVLQ 410
Query: 121 DLLNYDETTIAKLKEKKIL 139
L E +A+L+ +L
Sbjct: 411 SLGIATE-QMAELRAAGVL 428
>gi|85705763|ref|ZP_01036860.1| CAIB/BAIF family protein [Roseovarius sp. 217]
gi|85669753|gb|EAQ24617.1| CAIB/BAIF family protein [Roseovarius sp. 217]
Length = 393
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 132/279 (47%), Positives = 178/279 (63%), Gaps = 6/279 (2%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTEL 270
PL + +LDL+RI+AGP CT LL DLGAEVIK+E + GD+ R+WGPPF N T+L
Sbjct: 6 PLEGLVVLDLSRILAGPTCTQLLGDLGAEVIKIES-LEGDDTRQWGPPFALNSEGNPTDL 64
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
S YF NRNKKSV VD PE Q+++ LA + DV++ENF PG L + L + L
Sbjct: 65 SAYFMSSNRNKKSVAVDLTDPEMQRVLHALAGRADVVIENFKPGGLRKYGLDHDTLCAAY 124
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYA 390
L+YCS++GFG GP +D+PGYD++A GG++ ITG DG P KVG+ D+ GLYA
Sbjct: 125 PGLVYCSISGFGQTGPNRDKPGYDLMAQGYGGIMSITGEADGEPMKVGVGVADVVCGLYA 184
Query: 391 HGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQ 450
++AAL H+ TG+GQ ID L+ ++ L+N G NYL +G R G +H N+VP+Q
Sbjct: 185 STGILAALRHRDATGEGQHIDIALVDATMAWLVNQGLNYLTSGTSPTRAGNAHPNIVPYQ 244
Query: 451 VFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
VF T++G+V + G+D QY C + A DP Y T
Sbjct: 245 VFATADGHVIVAVGNDSQYARFCDYLGQPDWATDPHYAT 283
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 52/124 (41%), Gaps = 2/124 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C + A DP Y T R+ +R+ L I +TT + + P VN
Sbjct: 266 FCDYLGQPDWATDPHYATNTARLTHRDTLVPMIVEVLATRTTAHVIEGLEARKVPVGPVN 325
Query: 61 SISQVFADEHIQ--DIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
+I Q E Q + + + H GD++++G + +S T R+ PP G TD V
Sbjct: 326 TIGQALETEQAQARGMTITMPVPHTAKGDVRLIGNPLKFSRTPVSYRSAPPTTGADTDAV 385
Query: 119 LKDL 122
L L
Sbjct: 386 LGPL 389
>gi|429771181|ref|ZP_19303210.1| III protein, CoA-transferase family, partial [Brevundimonas
diminuta 470-4]
gi|429182367|gb|EKY23474.1| III protein, CoA-transferase family, partial [Brevundimonas
diminuta 470-4]
Length = 337
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 135/301 (44%), Positives = 187/301 (62%), Gaps = 11/301 (3%)
Query: 203 SLDLALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGP 262
+ + + + + S PL VR+LDL+R++AGP+ T LADLGAEVIK+E+P GD+ R WGP
Sbjct: 4 AASIPVPAPSASGPLHGVRVLDLSRVLAGPWATQTLADLGAEVIKIERPGAGDDTRHWGP 63
Query: 263 PFLNNTELS----TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDR 318
PF E + YF C NR KKSV +D +P+G + ++ LA CDV+VENF G L +
Sbjct: 64 PFTTTAEGAPGDAAYFLCANRGKKSVELDIASPDGAEAVRRLAATCDVVVENFKTGGLKK 123
Query: 319 LNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----P 374
L Y L+ +N +L+YCS+TGFG GP R GYD + ++GGL+ ITG PDG P
Sbjct: 124 YGLDYAALAAVNPKLVYCSITGFGQDGPDAHRAGYDYMIQAMGGLMSITGQPDGAPGAEP 183
Query: 375 CKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGI 434
KVG+A +DL TGLYA A++AAL H TG+GQ +D L Q +ML N NY +G
Sbjct: 184 MKVGVAVVDLFTGLYASNAILAALWHARATGEGQHVDIALFDVQAAMLANQATNYFVSGK 243
Query: 435 EGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALIL 494
R G +H N+ P+Q F S+G V I G+D Q++ +C + L+ + R+ T AL +
Sbjct: 244 APTRMGNAHPNLAPYQPFACSDGMVIIAVGNDGQFRALCGALGLEA---EDRFATNALRV 300
Query: 495 A 495
A
Sbjct: 301 A 301
>gi|264678329|ref|YP_003278236.1| bile acid-inducible L-carnitine dehydratase [Comamonas testosteroni
CNB-2]
gi|262208842|gb|ACY32940.1| L-carnitine dehydratase/bile acid-inducible [Comamonas testosteroni
CNB-2]
Length = 415
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 134/299 (44%), Positives = 185/299 (61%), Gaps = 9/299 (3%)
Query: 212 NPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE-- 269
P+ L ++++LDL+R++AGP+ L DLGAEVIKVE+P TGD+ R WGPP++ + E
Sbjct: 7 QPAQALQHIKVLDLSRVLAGPWAAQTLGDLGAEVIKVERPGTGDDTRAWGPPYVADAEGQ 66
Query: 270 ---LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHL 326
S Y+ C NRNK+S+ VDF EGQ+I++ L +CDVL+ENF G L + L Y L
Sbjct: 67 PTGESAYYMCTNRNKQSISVDFTRGEGQEIVRQLVARCDVLIENFKTGGLAQYGLDYTSL 126
Query: 327 SEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASI 382
S +N +L+YCSVTGFG GPY R GYD + +GGL+ I+GH P G P KVG+A
Sbjct: 127 SALNPRLVYCSVTGFGQDGPYAHRAGYDFLIQGMGGLMSISGHADGQPGGGPMKVGVALT 186
Query: 383 DLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTS 442
D+ TGLYA A++AAL + TG+GQ ID LL V+ L N NYL +R G +
Sbjct: 187 DILTGLYASTAILAALQAREHTGRGQHIDLALLDVGVACLANQSMNYLYGDQVPQRMGNA 246
Query: 443 HANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
H N VP+Q F T +G++ + G+D Q+ C+ A D R+ + A LA + L+
Sbjct: 247 HPNTVPYQEFPTEDGHMILAVGNDGQFARFCQAAGRSEWAEDERFRSNAARLAHRAELV 305
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 66/140 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+ A D R+ + A R+ +R L + I T+ ++T W+ + + + P +N
Sbjct: 276 FCQAAGRSEWAEDERFRSNAARLAHRAELVEMIRRVTLTRSTRAWVQLLEQHAVPCGPIN 335
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ +VF D ++ + ++H K G + +V + S T R PP LG+HT +L+
Sbjct: 336 TVREVFEDPQVRARGMQIAMTHPKAGQVPLVASPIRLSDTPVTYRHAPPQLGQHTLELLE 395
Query: 121 DLLNYDETTIAKLKEKKILG 140
L + ++ +LG
Sbjct: 396 RHLGLSVQQMQAYRDSGVLG 415
>gi|430806997|ref|ZP_19434112.1| L-carnitine dehydratase/bile acid-inducible protein F [Cupriavidus
sp. HMR-1]
gi|429500731|gb|EKZ99090.1| L-carnitine dehydratase/bile acid-inducible protein F [Cupriavidus
sp. HMR-1]
Length = 407
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 135/284 (47%), Positives = 186/284 (65%), Gaps = 9/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L ++++LDL+R++AGP+ T LAD+GAEVIKVE+P GD+ R WGPPFL N T+ S
Sbjct: 5 LGHIKVLDLSRVLAGPWATQNLADMGAEVIKVERPGAGDDTRGWGPPFLKDPQGNETDDS 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+YF NR KKS+ +D +P+GQ II+ LA++CDV+VEN+ G L R L Y+ L ++N
Sbjct: 65 SYFLSANRGKKSITIDLASPKGQDIIRALARECDVVVENYKVGTLARYGLSYEDLRKLNP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+L+YCS+TGFG GPY PGYD + +GGL+ ITG PDG P K GIA DL TG
Sbjct: 125 RLVYCSITGFGQTGPYAALPGYDFVFQGMGGLMSITGMPDGEPGAGPVKSGIAITDLLTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA A++AAL H+ +G+GQ ID +LL V++ NY +G +R G +H+N+V
Sbjct: 185 MYATSAILAALEHRNVSGEGQYIDISLLDCVVTINSYQAINYFLSGKVPQRMGNAHSNMV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P+QVF+ G V + G+D QY C V+ LA D R+ T A
Sbjct: 245 PYQVFRCKEGDVIVAVGNDTQYVAFCGVIGRPDLAEDARFTTAA 288
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 72/141 (51%), Gaps = 4/141 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C V+ LA D R+ T A R NRE L ++ + +T EW+ + + + P +
Sbjct: 269 FCGVIGRPDLAEDARFTTAAQRNRNRETLIPQVAEAMLARTMTEWVTLMEAANVPCGPIY 328
Query: 61 SISQVFADEHIQ--DIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
++ QVF D ++ D++LV E H + + +S T + P LGEHTD V
Sbjct: 329 NMKQVFEDPQVRHRDMQLVLE--HNSGSKAPSLANPIRFSDTPIRYQRSAPTLGEHTDRV 386
Query: 119 LKDLLNYDETTIAKLKEKKIL 139
L+D+L + E TI L+E+ ++
Sbjct: 387 LQDMLAFSEETIDALREQGVI 407
>gi|440638808|gb|ELR08727.1| hypothetical protein GMDG_03409 [Geomyces destructans 20631-21]
Length = 457
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 134/294 (45%), Positives = 188/294 (63%), Gaps = 9/294 (3%)
Query: 207 ALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPF-- 264
AL ++ LPL VR+LD+TR++AGP+CT +L DLGAEVIKVE P+ GD+ R WGPP+
Sbjct: 44 ALEEDDGKLPLKGVRVLDMTRVLAGPYCTQILGDLGAEVIKVEHPIRGDDTRAWGPPYAP 103
Query: 265 ------LNNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDR 318
L+ S Y+ VNRNKKS+ + F+ P G + L D+LVEN++P L +
Sbjct: 104 YTKESGLSGPGESAYYLSVNRNKKSLALSFQHPSGVAALHKLLPTIDILVENYLPNTLAK 163
Query: 319 LNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVG 378
+L Y LS +N +LIY SVTG+G GPY R GYD++ + GL+HITG DGPP KVG
Sbjct: 164 YSLDYATLSALNPKLIYASVTGYGQTGPYAPRAGYDVMVEAEMGLMHITGSRDGPPVKVG 223
Query: 379 IASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAG-IEGK 437
+A DL TGLY A+MAALL + +TG+GQ ID L QV+ L N+ ++ L +G +
Sbjct: 224 VAVTDLTTGLYTSNAIMAALLARARTGRGQHIDAALSDCQVATLSNLASSSLVSGERDSG 283
Query: 438 RWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
RWGT+H ++VP++ F T +G +G G+D+ + +C+ + A D R+ T A
Sbjct: 284 RWGTAHPSIVPYRAFATKDGEFLVGGGNDRLFGILCEGLGRGEWAGDERFKTNA 337
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 75/136 (55%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + A D R+ T A RV NR +L IE T +TT+EWL F+G PYA VN
Sbjct: 318 LCEGLGRGEWAGDERFKTNAERVANRVVLEGMIEEVTRGRTTQEWLEAFEGKGLPYAAVN 377
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ EH++ +V + H G++++V V YS P +RT PP LGEHT+ VL+
Sbjct: 378 DVRNTLDHEHVRARGMVVNVGHGACGEVQMVNTPVKYSEALPGIRTAPPLLGEHTEEVLR 437
Query: 121 DLLNYDETTIAKLKEK 136
++L I ++++
Sbjct: 438 EMLGMSTGEIEAMRKE 453
>gi|375137187|ref|YP_004997837.1| L-carnitine dehydrogenase [Acinetobacter calcoaceticus PHEA-2]
gi|325124632|gb|ADY84155.1| L-carnitine dehydrogenase [Acinetobacter calcoaceticus PHEA-2]
Length = 409
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 131/281 (46%), Positives = 183/281 (65%), Gaps = 9/281 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ N T S
Sbjct: 4 LQGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPRVGDDTRMWGPPWMPDQDGNMTRES 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF C NRNK SV VD TPEGQ +I ++AK DV++EN+ G L + L Y LSE+N
Sbjct: 64 GYFQCTNRNKYSVAVDITTPEGQALIYEIAKTADVVIENYKTGSLAKYGLDYASLSELNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
++YCS+TGFG GP + PGYD I + GL+ ITG PD G KVG+A +D+ TG
Sbjct: 124 NIVYCSITGFGQDGPRAEEPGYDFIIQGMSGLMSITGEPDDVAGGGAQKVGVAVVDIQTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AAL+ + +TG+GQ ID +LL QV+ L N G NYL +G +R G H ++V
Sbjct: 184 LYSTIAIQAALIARSQTGRGQYIDMSLLDVQVAALANQGMNYLASGKAPQRMGNQHPSIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYL 488
P+Q FK + I G+DKQ++D+C + L + +++
Sbjct: 244 PYQTFKAKDKEFIIACGNDKQFKDLCIAIGYAELLENEKFV 284
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 2/139 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L + +++ RV+ R+ L + ++KT +EW+ + + P +N
Sbjct: 268 LCIAIGYAELLENEKFVRNQDRVKYRDELIPLLSEHFLQKTAKEWVDMIHALKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI A+ I LV I H + + +G + S T E PP LGEHT +L
Sbjct: 328 SIEDALAEPQIVHRNLVVNIPHRLNENFQTIGSPIKLSDTPVEYHHAPPELGEHTAQILS 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+E +A LKEK I+
Sbjct: 388 RFKTAEE--LATLKEKGII 404
>gi|410664217|ref|YP_006916588.1| acyl-CoA transferase/carnitine dehydratase [Simiduia agarivorans
SA1 = DSM 21679]
gi|409026574|gb|AFU98858.1| acyl-CoA transferase/carnitine dehydratase [Simiduia agarivorans
SA1 = DSM 21679]
Length = 394
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 132/294 (44%), Positives = 186/294 (63%), Gaps = 9/294 (3%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTEL 270
PL +++LD++RI+AGP+ LLADLGA+V+KVE+P GD+ R WGPP+L +TE
Sbjct: 4 PLHGLKVLDMSRILAGPWAGQLLADLGADVVKVERPGAGDDTRHWGPPYLKDRNGEDTED 63
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
+ YF NR K+S+ +D P+ Q+II LA++ DV++EN+ G L + L Y L N
Sbjct: 64 AAYFMAANRGKRSIALDITQPDDQKIIHQLAQKADVILENYKVGGLKKYGLDYDALKSAN 123
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPC----KVGIASIDLAT 386
+L+YCS+TGFG GPY R GYD + +GGL+ ITG PDG P KVG+A DL T
Sbjct: 124 PRLVYCSITGFGQTGPYSQRAGYDFMIQGMGGLMSITGEPDGMPGAGPQKVGVAVTDLFT 183
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANV 446
GLYA A+ +ALL + ++G+GQ ID L Q ++L N NYL GI KR G +H N+
Sbjct: 184 GLYATIAIQSALLERERSGQGQYIDLALFDVQAAVLANQATNYLVGGITPKRMGNAHPNI 243
Query: 447 VPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHL 500
VP+Q F T++G++ + G+D Q++ C+ LA DPRY T +A H+
Sbjct: 244 VPYQAFATADGHMILAVGNDGQFKKFCQAAGKPELADDPRYATNPARIAHREHI 297
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 62/126 (49%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+ LA DPRY T R+ +RE +C E+ A TT+ WL + + + P +N
Sbjct: 269 FCQAAGKPELADDPRYATNPARIAHREHICAEVAALLAANTTQAWLDLLEPLGVPCGPIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
S+ QVF+D I + E+ H G + + G + + + +R PP L EH V+
Sbjct: 329 SVDQVFSDPQILHRGMRVELEHPVTGTVTLPGNPIHFGRSDLNLRQAPPKLAEHQSEVIT 388
Query: 121 DLLNYD 126
D LN D
Sbjct: 389 DWLNGD 394
>gi|239503628|ref|ZP_04662938.1| CoA-transferase family III family protein [Acinetobacter baumannii
AB900]
gi|421679252|ref|ZP_16119130.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC111]
gi|410391484|gb|EKP43852.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC111]
Length = 405
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 132/284 (46%), Positives = 188/284 (66%), Gaps = 9/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ +T+ +
Sbjct: 4 LNGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPKVGDDTRSWGPPWMKDDSGQDTQEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK SV +D + EGQ++IK L + DV++EN+ G L + L Y+ LS IN
Sbjct: 64 AYYQSTNRNKLSVAIDIASSEGQELIKALIQDTDVVIENYKAGSLKKYGLDYESLSAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TGFG GP + PGYD I +GGL+ +TG P G P KVG+A DLATG
Sbjct: 124 KLVYCSITGFGQTGPRAEEPGYDFIIQGMGGLMSVTGERDDLPGGGPQKVGVAFSDLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ ALL+++ TG GQ ID LL Q++ + N G NYL++G KR+G +HAN+V
Sbjct: 184 LYSTIAIQTALLNRHVTGLGQYIDMALLDVQIATMANQGMNYLSSGNIPKRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P+QVFK S+ I G+D Q+ +C+ + L L D R+ A
Sbjct: 244 PYQVFKASDRDFIIACGNDTQFIQLCRSIGLPDLPNDARFARNA 287
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 77/140 (55%), Gaps = 2/140 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + L L D R+ A R+++R+ + ++ + KT +EW+ P +N
Sbjct: 268 LCRSIGLPDLPNDARFARNADRIKHRDEIIGILQTHFLTKTADEWVDAIYAAKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q + + +++ E++H + +K++G + S T E +T PP LGEHT VL
Sbjct: 328 NLEQALQEPQVIAREMLVEMNHPQREKLKVIGSPIKLSRTPVEYKTAPPLLGEHTQAVLG 387
Query: 121 DLLNYDETTIAKLKEKKILG 140
+++ ++ +A+LKEK ++G
Sbjct: 388 RIVSSEK--LAELKEKGVIG 405
>gi|421464017|ref|ZP_15912710.1| CoA-transferase family III protein [Acinetobacter radioresistens
WC-A-157]
gi|400206391|gb|EJO37368.1| CoA-transferase family III protein [Acinetobacter radioresistens
WC-A-157]
Length = 409
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 131/282 (46%), Positives = 183/282 (64%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L +R+LDL+R++AGP+C +LADLGAEVIKVE+P TGD+ R WGPP++ T S
Sbjct: 4 LQGIRVLDLSRVLAGPWCGQILADLGAEVIKVERPGTGDDTRMWGPPWMLDQNGEQTRES 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF C NRNK SV +D T EGQ++I+++AK DV++EN+ G L R L Y +N
Sbjct: 64 GYFQCTNRNKHSVAIDMATHEGQELIREMAKTADVVIENYKAGSLVRYGLDYDSFKVLNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPC----KVGIASIDLATG 387
QL+YCS+TGFG GP PGYD I + GL+ ITG PD P KVG+A +DL TG
Sbjct: 124 QLVYCSITGFGQDGPRAAEPGYDFIIQGMAGLMSITGEPDSIPGGGAQKVGVAVVDLQTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA A+ AALL + TG+GQ ID +LL Q++ L N G NYL++G +R G +H N+V
Sbjct: 184 LYATIAIQAALLARQHTGRGQYIDMSLLDVQIAGLANQGMNYLSSGKAPQRMGNTHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+ + + G+D+Q++++C ++ + L +LT
Sbjct: 244 PYQTFRAKDKEFIVACGNDRQFRELCIAIDRKDLLGRSEFLT 285
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 2/139 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ + L +LT RV++R L + +++ + W+ V P +N
Sbjct: 268 LCIAIDRKDLLGRSEFLTNQSRVKHRHELVGILSDYFLQENAQYWVERIHAVKVPVGMIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI + FA+ +Q +++ ++ H +++G + S T E PP LGEHT +L+
Sbjct: 328 SIEEAFAEPQVQARQMLVKLPHVLNPAFRVIGSPIKLSDTPVEYWQAPPRLGEHTGQILR 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ E + L+E K++
Sbjct: 388 EFKT--EEQLQLLRENKVI 404
>gi|425769874|gb|EKV08355.1| CAIB/BAIF family enzyme [Penicillium digitatum Pd1]
gi|425771452|gb|EKV09895.1| CAIB/BAIF family enzyme [Penicillium digitatum PHI26]
Length = 452
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 132/290 (45%), Positives = 191/290 (65%), Gaps = 14/290 (4%)
Query: 214 SLPLSNVRILDLTRIIAG------PFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN 267
SLPL+ +R+LD+TR++AG P+CT +L DLGA+V+KVE PV GD+ R WGPP+
Sbjct: 41 SLPLAGIRVLDMTRVLAGASTPLEPYCTQILGDLGADVVKVEHPVRGDDTRAWGPPYAKY 100
Query: 268 TELS-------TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLN 320
+ S Y+ VNRNKKS+ + F+ G +I+ LAK+CDVLVEN++PG L +
Sbjct: 101 EDASRKGPGESAYYLAVNRNKKSLGLSFQHKSGVEILHKLAKECDVLVENYLPGGLKKYG 160
Query: 321 LGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIA 380
+ Y+ L EIN +LIY S+TG+G GPY R GYD++ + GL+HITG DG P KVG+A
Sbjct: 161 MDYESLREINPKLIYASITGYGQTGPYSTRAGYDVMVEAEMGLMHITGARDGAPVKVGVA 220
Query: 381 SIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGI-EGKRW 439
DL TGLY A+MAAL+ + +TG+GQ ID L QV+ L N+ ++ L +G + RW
Sbjct: 221 VTDLTTGLYTSNAIMAALIARGRTGRGQHIDVCLSDCQVATLSNLASSALISGQKDSGRW 280
Query: 440 GTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
GT+H ++VP++ +KTS+G + G G+D+ + +C + L D R++T
Sbjct: 281 GTAHPSIVPYRSYKTSDGDILFGGGNDRLFGVLCDRLGFSELKSDARFVT 330
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 83/139 (59%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L D R++T + RV++R + IE+ TM+KTT+EWL +F+G PYA VN
Sbjct: 313 LCDRLGFSELKSDARFVTNSNRVQHRAEIDDIIESTTMQKTTQEWLDVFEGSGMPYAAVN 372
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I +H+ +V E+ H G IK+V + YS P VR PPP LG+HTD +L
Sbjct: 373 DIQGTLNHKHVLARGMVTEVDHPACGPIKMVNTPIKYSEATPGVRMPPPTLGQHTDEILS 432
Query: 121 DLLNYDETTIAKLKEKKIL 139
+LNY E IA+LK++ ++
Sbjct: 433 TVLNYGEADIARLKDEGVV 451
>gi|294853240|ref|ZP_06793912.1| alpha-methylacyl-CoA racemase [Brucella sp. NVSL 07-0026]
gi|294818895|gb|EFG35895.1| alpha-methylacyl-CoA racemase [Brucella sp. NVSL 07-0026]
Length = 411
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 134/276 (48%), Positives = 180/276 (65%), Gaps = 9/276 (3%)
Query: 221 RILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELSTYFT 275
R+LD++R++AGP+C +LADLGAEVIK+E+P TGD+ R WGPP++ N T ++Y+
Sbjct: 6 RVLDMSRVLAGPWCGQILADLGAEVIKIERPRTGDDTRDWGPPWMKDEQGNPTREASYYQ 65
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
NR K SV ++ +PEGQ +++ + +CDVL+EN+ G L + L Y+ LS IN L+Y
Sbjct: 66 SANRGKFSVALNIASPEGQDLLRKMVAECDVLIENYKAGSLAKYGLDYETLSAINPGLVY 125
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATGLYAH 391
CSVTGFG GP PGYD I IGGL+ ITG P G P KVG+A DL TGLY+
Sbjct: 126 CSVTGFGQTGPRAPEPGYDFIIQGIGGLMSITGERDDKPGGGPQKVGVAVADLMTGLYSA 185
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A+ AALL + KTGKGQ ID LL QV+ L N NYL +G R+G +HAN+VP+QV
Sbjct: 186 IAIEAALLSRAKTGKGQHIDMALLDVQVAALCNQSQNYLASGRPPGRYGNAHANIVPYQV 245
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
F+ S+ I G+D Q+ +C + L L DPR+
Sbjct: 246 FRASDRDFIIACGNDAQFVSLCDAIGLPDLPKDPRF 281
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L L DPR+ + RV +R+ + + A + T +EW+ P +N
Sbjct: 266 LCDAIGLPDLPKDPRFTRNSDRVIHRDEIIGILAAHFLTGTADEWIGRIHPRGIPVGAIN 325
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I++ + ++ ++ +I H D VG + S T E + P LGEHTD +L+
Sbjct: 326 DIARALDEPQVKARNMLVQIPHPLNKDFVTVGSPIKLSGTPVEYKRAAPMLGEHTDTLLQ 385
Query: 121 DLLNYDETTIAKLKEKKIL 139
L D+ + LK + I+
Sbjct: 386 QLAKLDDDRLNDLKSRGII 404
>gi|70991050|ref|XP_750374.1| CAIB/BAIF family enzyme [Aspergillus fumigatus Af293]
gi|66848006|gb|EAL88336.1| CAIB/BAIF family enzyme [Aspergillus fumigatus Af293]
gi|159130848|gb|EDP55961.1| CAIB/BAIF family enzyme [Aspergillus fumigatus A1163]
Length = 448
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 132/302 (43%), Positives = 193/302 (63%), Gaps = 19/302 (6%)
Query: 207 ALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL- 265
A+ + + +LPL +R+LD+TR++AGP+CT +L DLGA++IKVE PV GD+ R WGPP+
Sbjct: 25 AIPTSDETLPLKGIRVLDMTRVLAGPYCTQILGDLGADIIKVEHPVRGDDTRAWGPPYAK 84
Query: 266 ------NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRL 319
+ S YF VNRNK+S+ + F G +I+ LAK+CDVLVEN++PG L +
Sbjct: 85 YIDGSHDGPGESAYFLAVNRNKRSIGLSFAHKSGVEILHKLAKECDVLVENYLPGTLKKY 144
Query: 320 NLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGI 379
L Y+ L IN +LIY S+TG+G GPY +R GYD++ + GL+HITG DG P KVG+
Sbjct: 145 GLDYETLRSINPRLIYASITGYGQTGPYSNRAGYDVMVEAEMGLMHITGSRDGDPVKVGV 204
Query: 380 ASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAG-IEGKR 438
A DL TGLY A+MAALL + +TG+GQ ID L QV+ L N+ ++ L +G + R
Sbjct: 205 AVTDLTTGLYTSNAIMAALLARMRTGQGQHIDACLSDCQVATLANIASSALISGEKDSGR 264
Query: 439 WGTSH-----------ANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
WGT+H A++VP++ ++T +G + G G+D+ + +C + DPR+
Sbjct: 265 WGTAHRKLMDMVLPALASIVPYRSYQTLDGDILFGGGNDRLFGVLCDRLGFPEWKTDPRF 324
Query: 488 LT 489
+T
Sbjct: 325 IT 326
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 81/139 (58%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + DPR++T RV++RE L IE + +KTT+EWL I +G PYA +N
Sbjct: 309 LCDRLGFPEWKTDPRFITNRDRVKHREELDDLIEKRVKQKTTQEWLEILEGSGMPYAAIN 368
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I H+Q +V E+ H G +K+V + YS P VR PPP LG+HTD +LK
Sbjct: 369 DIQGTLNHSHVQARGMVTEVDHPACGPVKLVNTPIKYSHATPGVRRPPPTLGQHTDEILK 428
Query: 121 DLLNYDETTIAKLKEKKIL 139
+LLNYD+ I LK++ I+
Sbjct: 429 ELLNYDKADIDLLKKEGIV 447
>gi|421618400|ref|ZP_16059377.1| CAIB/BAIF family protein [Pseudomonas stutzeri KOS6]
gi|409779731|gb|EKN59384.1| CAIB/BAIF family protein [Pseudomonas stutzeri KOS6]
Length = 410
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 134/284 (47%), Positives = 183/284 (64%), Gaps = 9/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ +R+LDL+R++AGP+C +LADLGAEVIKVE+P GD+ R WGPP++ N+ +
Sbjct: 4 LNGIRVLDLSRVLAGPWCGQVLADLGAEVIKVERPRVGDDTRGWGPPYMKTPDGENSIEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+Y+ NRNK SV V+ TPEGQ++++ LA DVL+EN+ G L + L Y LS+IN
Sbjct: 64 SYYQSANRNKLSVAVNIATPEGQELVRALAATSDVLIENYKAGSLAKYGLDYASLSQINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPC----KVGIASIDLATG 387
+L+YCS+TGFG GP + PGYD I +GGL+ +TG DG P KVG+A D+ TG
Sbjct: 124 RLVYCSITGFGQTGPRAEEPGYDFIIQGMGGLMSVTGEKDGVPGAGPQKVGVAVADVMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL + KTG+GQ D LL QV+ L N NYL+ G R G +H N+V
Sbjct: 184 LYSTVAIQAALLAREKTGRGQHCDMALLDVQVAALGNQSQNYLSTGRSPGRQGNAHVNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P+QVF S+ I G+D Q+ +C + L L LDPR+ A
Sbjct: 244 PYQVFTASDMDFIIACGNDTQFVALCDAIGLPELPLDPRFTRNA 287
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 69/145 (47%), Gaps = 3/145 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L L LDPR+ A RV NRE + + + ++ T + W+ P +N
Sbjct: 268 LCDAIGLPELPLDPRFTRNADRVRNREAIVGLLAERFLKDTADNWVSRIHAAKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I + A+ + ++ I H D ++VG V S T E + P P LGEHT+ VLK
Sbjct: 328 DIGRALAEPQVLARDMLVNIPHAMNPDFRMVGSPVKLSDTPVEYQRPAPMLGEHTEQVLK 387
Query: 121 DLLNYDETTIAKLKEKKILGLIERL 145
L + LK K G+IE+L
Sbjct: 388 SRLGLSADALEVLKSK---GVIEQL 409
>gi|421856491|ref|ZP_16288856.1| putative CoA-transferase [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
gi|403188067|dbj|GAB75057.1| putative CoA-transferase [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
Length = 409
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 132/282 (46%), Positives = 183/282 (64%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L +R+LDL+R++AGP+C +LADLGAEVIKVE+P TGD+ R WGPP++ T S
Sbjct: 4 LQGIRVLDLSRVLAGPWCGQILADLGAEVIKVERPGTGDDTRMWGPPWMLDQNGEQTRES 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF C NRNK SV +D T EGQ++I+++AK DV++EN+ G L R L Y L +N
Sbjct: 64 GYFQCTNRNKHSVAIDMATHEGQELIREMAKTADVVIENYKAGSLVRYGLDYDSLKVLNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPC----KVGIASIDLATG 387
QL+YCS+TGFG GP PGYD I + GL+ ITG PD P KVG+A +DL TG
Sbjct: 124 QLVYCSITGFGQDGPRAAEPGYDFIIQGMAGLMSITGEPDSIPGGGAQKVGVAVVDLQTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA A+ AALL + TG+GQ ID +LL Q++ L N G NYL++G +R G +H N+V
Sbjct: 184 LYATIAIQAALLARQHTGRGQYIDMSLLDVQIAGLANQGMNYLSSGKAPQRMGNTHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+ + + G+D+Q++++C + + L +LT
Sbjct: 244 PYQTFRAKDKEFIVACGNDRQFRELCIAIYRKDLLGRSEFLT 285
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 66/139 (47%), Gaps = 2/139 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + + L +LT RV++R L + +++ + W+ V P +N
Sbjct: 268 LCIAIYRKDLLGRSEFLTNQSRVKHRHELVGILSDYFLQENAQYWVERIHAVKVPVGMIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI + FA+ +Q +++ ++ H +++G + S T E PP LGEHT +L+
Sbjct: 328 SIEEAFAEPQVQARQMLVKLPHVLNPAFRVIGSPIKLSDTPVEYWQAPPRLGEHTGQILR 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ E + L+E K++
Sbjct: 388 EFKT--EEQLQLLRENKVI 404
>gi|451996593|gb|EMD89059.1| hypothetical protein COCHEDRAFT_1196007 [Cochliobolus
heterostrophus C5]
Length = 1110
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 126/287 (43%), Positives = 190/287 (66%), Gaps = 9/287 (3%)
Query: 215 LPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL---- 270
LPL+ +++LD+TR++AGP+CT +L DLGA+VIK+E P GD+ R WGPP+ T+
Sbjct: 45 LPLAGIKVLDMTRVLAGPYCTQILGDLGADVIKIEHPTRGDDTRAWGPPYAKYTDEQEGP 104
Query: 271 --STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSE 328
S Y+ VNRNK+S+ + F+ P G I+ L K+CDVLVEN++PG L + + Y +S+
Sbjct: 105 GESAYYLGVNRNKRSMGLSFQHPAGVDILHRLVKECDVLVENYLPGSLAKYAMDYDTVSK 164
Query: 329 INSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGL 388
IN ++Y S+TG+G GPY++R GYD++ + GL+HITG DGPP KVG+A DL TGL
Sbjct: 165 INPDIVYASITGYGQTGPYRNRAGYDVMVEAEMGLMHITGTRDGPPVKVGVAVTDLTTGL 224
Query: 389 YAHGAVMAALLHKYKT--GKGQKIDCNLLSTQVSMLINVGANYLNAG-IEGKRWGTSHAN 445
Y +++AAL ++++ GQ ID L QV+ L N+ ++ L +G + RWGTSH +
Sbjct: 225 YTSNSIIAALFRRFRSPGSGGQHIDVALSDCQVATLANIASSCLISGQRDSGRWGTSHPS 284
Query: 446 VVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
+VP++ FKT++G + +G G+DK Y +C + D ++ T AL
Sbjct: 285 IVPYKAFKTADGDILLGGGNDKLYGTLCSRLGKPEWITDEKFKTNAL 331
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 80/140 (57%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + D ++ T ALRV++R+ L + IEA+T +K+T+E L IF+G PYA +N
Sbjct: 311 LCSRLGKPEWITDEKFKTNALRVQHRDELEELIEAETRKKSTQELLEIFEGSGMPYAAIN 370
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ EH+ +VKE+ H G IK+V V +S + P +R PPP LG+HT+ +L
Sbjct: 371 DVQDTLNHEHVLARNMVKEVEHPACGPIKLVNTPVKWSQSTPGIRLPPPLLGQHTNEILN 430
Query: 121 DLLNYDETTIAKLKEKKILG 140
D L + + L+ + ++
Sbjct: 431 DTLGMSKEDVEALRSEGVVA 450
>gi|395646989|ref|ZP_10434839.1| CAIB/BAIF family protein [Pseudomonas extremaustralis 14-3 substr.
14-3b]
Length = 412
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 135/284 (47%), Positives = 183/284 (64%), Gaps = 9/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ R+LDL+R++AGP+C LADLGAEVIKVE+P GD+ R WGPP++ T +
Sbjct: 4 LTGYRVLDLSRVLAGPWCGQTLADLGAEVIKVERPGAGDDTRGWGPPWMKGQNDETTREA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+Y+ NR K SV ++ + EGQ++++ LA CDVL+EN+ G L + L Y LS++N
Sbjct: 64 SYYQSTNRGKLSVALNLASAEGQELVRALATDCDVLIENYKAGSLAKYGLDYASLSQLNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCSVTGFG GP PGYD I IGGL+ ITG P G P KVG+A DL TG
Sbjct: 124 RLVYCSVTGFGQTGPRAAEPGYDFIIQGIGGLMSITGERDDLPGGGPQKVGVAFSDLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL + K+G GQ ID LL QV+ L N NYL++G R+G +HAN+V
Sbjct: 184 LYSTVAIQAALLSREKSGVGQYIDMALLDVQVATLCNQSQNYLSSGKAPGRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P+QVF+ S+ I G+D Q+ +C+ + L L LDPR+ A
Sbjct: 244 PYQVFRASDQDFVIACGNDSQFVGLCEAIGLTDLPLDPRFARNA 287
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 73/145 (50%), Gaps = 3/145 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + L L LDPR+ A RV NRE + + + + T +EW+ P +N
Sbjct: 268 LCEAIGLTDLPLDPRFARNADRVTNREAVIEILAQHFLGATADEWVRRIHPQGVPIGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI+Q + ++ ++ I H D VG + S T E P P LGEHTD VLK
Sbjct: 328 SIAQALDEPQVKARNMLVNIPHPLKADFVTVGSPIKLSGTPVEYLRPAPMLGEHTDEVLK 387
Query: 121 DLLNYDETTIAKLKEKKILGLIERL 145
L D+ +A+LK + G+IE+L
Sbjct: 388 RQLGLDDERLAELKAR---GVIEQL 409
>gi|310797053|gb|EFQ32514.1| CoA-transferase family III [Glomerella graminicola M1.001]
Length = 437
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 134/295 (45%), Positives = 188/295 (63%), Gaps = 9/295 (3%)
Query: 215 LPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-------- 266
LPL R+LD+TR++AGP+CT +L DLGAEVIKVE PV GD+ R WGPP+
Sbjct: 32 LPLDGYRVLDMTRVLAGPYCTQILGDLGAEVIKVEHPVRGDDTRAWGPPYATYKAGSSKE 91
Query: 267 NTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHL 326
S YF VNRNKKS+ ++F+ P G +I+ L +CD+LVEN++PG L + + Y+ L
Sbjct: 92 GPGESAYFLAVNRNKKSLGLNFQHPSGTEILHKLVAKCDMLVENYLPGTLGKYRMDYETL 151
Query: 327 SEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLAT 386
IN LIY S+TG+G GPY DR GYD++ + GL+HITG DG P KVG+A DL T
Sbjct: 152 RAINPGLIYASITGYGQTGPYSDRAGYDVMVEAEFGLMHITGARDGEPVKVGVAVTDLTT 211
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAG-IEGKRWGTSHAN 445
GLY ++MAALL + +TG+GQ ID L Q + L N+ ++ L +G + RWGT+H +
Sbjct: 212 GLYTSNSIMAALLARARTGRGQHIDVALSDCQTATLTNIASSCLISGEKDSGRWGTAHPS 271
Query: 446 VVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHL 500
+VP++ FKT +G + G G+D+ Y +C+ + D +Y T A +A + L
Sbjct: 272 IVPYRSFKTKDGDILFGGGNDRLYGILCEGLGRPEWRDDAKYKTNAQRVANRAEL 326
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 78/140 (55%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + D +Y T A RV NR L IEA T+ +TT EWL +F+G PYA VN
Sbjct: 298 LCEGLGRPEWRDDAKYKTNAQRVANRAELEALIEAVTVTRTTAEWLAVFEGRGMPYAAVN 357
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ EH +V E+ H + G IK+V V YS ++P +RTPPP LG+HT VL
Sbjct: 358 DVQGTLGHEHTLARNMVVEMEHGECGPIKMVNTPVKYSESEPTIRTPPPTLGQHTGEVLG 417
Query: 121 DLLNYDETTIAKLKEKKILG 140
+ L + E I L++ ++G
Sbjct: 418 EHLGFSEEQIRSLRDSGVVG 437
>gi|118587764|ref|ZP_01545174.1| putative conserved membrane-anchored protein [Stappia aggregata IAM
12614]
gi|118439386|gb|EAV46017.1| putative conserved membrane-anchored protein [Stappia aggregata IAM
12614]
Length = 394
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 131/292 (44%), Positives = 189/292 (64%), Gaps = 5/292 (1%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN----TE 269
+ PL +++++L RI+AGP+ LADLGA+VIKVE P GD+ R WGPPF+ +
Sbjct: 2 TAPLKGIKVVELARILAGPWTGQTLADLGADVIKVESP-QGDDTRGWGPPFVRDETGADR 60
Query: 270 LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEI 329
+ YF NR K+S+ VDF+T EGQ++++ L D+L+ENF G L + L Y LS++
Sbjct: 61 DAAYFHACNRGKRSIAVDFRTQEGQELVRRLVADADILIENFKVGGLAKYGLDYDSLSKV 120
Query: 330 NSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLY 389
N +LIYCS+TGFG GPY R GYD + +GG++ +TG P+G P K+G+A D+ TGLY
Sbjct: 121 NPKLIYCSITGFGQDGPYAHRAGYDFMIQGMGGIMDLTGDPEGDPQKIGVAFADIFTGLY 180
Query: 390 AHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPH 449
V+AAL + +TG+G+ +D LL QV +L N NY +G KR G +H N+VP+
Sbjct: 181 GVVGVLAALRRRDETGEGEWVDMALLDAQVGVLANQALNYFVSGKAPKRLGNAHPNIVPY 240
Query: 450 QVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
QVF S+G++ I G+D Q++ +C V+ L LA +PRY T A +A S L+
Sbjct: 241 QVFPASDGHLIIAVGNDGQFRRLCAVLGLPGLADNPRYATNAARVAARSDLV 292
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C V+ L LA +PRY T A RV R L + A+T + ++ L +G P +N
Sbjct: 263 LCAVLGLPGLADNPRYATNAARVAARSDLVPILTAETATRARDDLLAALEGEGVPAGPIN 322
Query: 61 SISQVFADEHI--QDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
S+ VF D+ + + +K+ + G + V + + Q + PALGEHTD +
Sbjct: 323 SVEDVFNDKQVLHRQMKVDLPATGVDGGSVASVRTPIRFKNGQLVLDRAAPALGEHTDEI 382
Query: 119 LKDL 122
L +L
Sbjct: 383 LMEL 386
>gi|260544404|ref|ZP_05820225.1| CAIB/BAIF family protein [Brucella abortus NCTC 8038]
gi|260759670|ref|ZP_05872018.1| acyl-CoA transferase/carnitine dehydratase [Brucella abortus bv. 4
str. 292]
gi|260762912|ref|ZP_05875244.1| L-carnitine dehydrogenase [Brucella abortus bv. 2 str. 86/8/59]
gi|260882769|ref|ZP_05894383.1| L-carnitine dehydrogenase [Brucella abortus bv. 9 str. C68]
gi|261215727|ref|ZP_05930008.1| CAIB/BAIF family CoA transferase [Brucella abortus bv. 3 str.
Tulya]
gi|260097675|gb|EEW81549.1| CAIB/BAIF family protein [Brucella abortus NCTC 8038]
gi|260669988|gb|EEX56928.1| acyl-CoA transferase/carnitine dehydratase [Brucella abortus bv. 4
str. 292]
gi|260673333|gb|EEX60154.1| L-carnitine dehydrogenase [Brucella abortus bv. 2 str. 86/8/59]
gi|260872297|gb|EEX79366.1| L-carnitine dehydrogenase [Brucella abortus bv. 9 str. C68]
gi|260917334|gb|EEX84195.1| CAIB/BAIF family CoA transferase [Brucella abortus bv. 3 str.
Tulya]
Length = 381
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 135/280 (48%), Positives = 182/280 (65%), Gaps = 9/280 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ R+LD++R++AGP+C +LADLGAEVIK+E+P TGD+ R WGPP++ N T +
Sbjct: 6 LTGYRVLDMSRVLAGPWCGQILADLGAEVIKIERPRTGDDTRDWGPPWMKDEQGNPTREA 65
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+Y+ NR K SV ++ +PEGQ +++ + +CDVL+EN+ G L + L Y+ LS IN
Sbjct: 66 SYYQSANRGKFSVALNIASPEGQDLLRKMVAECDVLIENYKAGSLAKYGLDYETLSAINP 125
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCSVTGFG GP PGYD I IGGL+ ITG P G P KVG+A DL TG
Sbjct: 126 GLVYCSVTGFGQTGPRAPEPGYDFIIQGIGGLMSITGERDDKPGGGPQKVGVAVADLMTG 185
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL + KTGKGQ ID LL QV+ L N NYL +G R+G +HAN+V
Sbjct: 186 LYSAIAIEAALLSRAKTGKGQHIDMALLDVQVAALCNQSQNYLASGRPPGRYGNAHANIV 245
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
P+QVF+ S+ I G+D Q+ +C + L L DPR+
Sbjct: 246 PYQVFRASDRDFIIACGNDAQFVSLCDAIGLPDLPKDPRF 285
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 41/92 (44%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L L DPR+ + RV +R+ + + A + T +EW+ P +N
Sbjct: 270 LCDAIGLPDLPKDPRFTRNSDRVIHRDEIIGILAAHFLTGTADEWIGRIHPRGVPVGAIN 329
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVG 92
I++ + ++ ++ +I H D VG
Sbjct: 330 DIARTLDEPQVKARNMLVQIPHPLNKDFVTVG 361
>gi|299134386|ref|ZP_07027579.1| L-carnitine dehydratase/bile acid-inducible protein F [Afipia sp.
1NLS2]
gi|298591133|gb|EFI51335.1| L-carnitine dehydratase/bile acid-inducible protein F [Afipia sp.
1NLS2]
Length = 426
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 135/295 (45%), Positives = 186/295 (63%), Gaps = 9/295 (3%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTEL 270
PL R+LDL+RI+AGP+ LL+DLGAEV KVE+P TGD+ R+WGPPFL NT
Sbjct: 19 PLVGYRVLDLSRILAGPWLGQLLSDLGAEVWKVERPGTGDDTRQWGPPFLKDDNAANTTE 78
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
S YF NR K S+C+D T EG I++ LA+ D+++EN+ G + R L Y+ L +
Sbjct: 79 SAYFLSANRGKHSICIDISTEEGGTIVRKLAQHADIVIENYKVGDMARYGLDYETLKKSK 138
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITG----HPDGPPCKVGIASIDLAT 386
+IYCS+TG+G GP K GYD+ +IGGL+ ITG +P G P KVG+ +D+ T
Sbjct: 139 PDIIYCSITGYGQTGPMKAIAGYDMAIQAIGGLMSITGESDDNPGGGPQKVGVPIVDILT 198
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANV 446
G+Y+ V++ALLH+ +TG+GQ ID LL QV++L N NYL G KR+G +H N+
Sbjct: 199 GMYSATGVISALLHRERTGEGQHIDMALLDVQVAVLANQNLNYLTTGTPPKRYGNAHPNI 258
Query: 447 VPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
VP+Q FKT +G + G+D+Q++ C L HLA D R+ T L + LI
Sbjct: 259 VPYQTFKTKDGSFVLAVGNDQQFKKFCAASRLTHLATDSRFATNTDRLNNRNQLI 313
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 71/139 (51%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C L HLA D R+ T R+ NR L ++A ++TTE W+ I + V P A +N
Sbjct: 284 FCAASRLTHLATDSRFATNTDRLNNRNQLIPLLDAHLAQETTEHWISILEPVGVPCAPIN 343
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ QVFA + + +SH +V + +S T+ E PP GE T VLK
Sbjct: 344 RLDQVFAHPQVIHRGMQINLSHSSGATAPLVANPIKFSATKIEYAKSPPRRGEDTKSVLK 403
Query: 121 DLLNYDETTIAKLKEKKIL 139
+LN+++T I +L + +I+
Sbjct: 404 SILNFNDTDIRRLSDLRII 422
>gi|10957014|ref|NP_049234.1| unknown [Novosphingobium aromaticivorans]
gi|3378447|gb|AAD04030.1| unknown [Novosphingobium aromaticivorans]
Length = 388
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 134/299 (44%), Positives = 192/299 (64%), Gaps = 5/299 (1%)
Query: 207 ALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL- 265
A + +PS PL VR+L+L RI+AGP+C LLADLGAEVIK+E+P GD+ R WGPPF+
Sbjct: 8 AAVTGDPSKPLDGVRVLELARILAGPWCGQLLADLGAEVIKIERPGAGDDTRHWGPPFVT 67
Query: 266 --NNTEL-STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLG 322
+ T L + YF NR K+S +D + EGQ II++LA D+++EN+ G L + L
Sbjct: 68 AEDGTSLGAAYFHSTNRGKRSFAIDIASAEGQAIIRELANGADIVIENYKVGGLAKYGLD 127
Query: 323 YKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASI 382
+ LSE+N +LI CS+TGFG GPY R GYD IA ++GG++ +TG PD P K GIA
Sbjct: 128 HAALSELNPRLITCSITGFGQTGPYAHRAGYDFIAQAMGGMMSMTGEPDREPQKAGIAVA 187
Query: 383 DLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTS 442
DL TG+Y+ A++AAL + +TG G ID +L TQV+++ N N++ +G +R+G
Sbjct: 188 DLFTGMYSTVAILAALNRRDRTGSGAHIDMAVLDTQVAVMANQAMNWMTSGKVPRRFGNG 247
Query: 443 HANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
HAN+ P+Q F T +G + I G+D Q+ +C+V+ L DPR+ T L + L+
Sbjct: 248 HANLAPYQAFPTLDGPLVIAAGNDGQFASLCRVLRCS-LHEDPRFATNPARLTNRAELV 305
>gi|422319341|ref|ZP_16400416.1| hypothetical protein HMPREF0005_02615 [Achromobacter xylosoxidans
C54]
gi|317405954|gb|EFV86232.1| hypothetical protein HMPREF0005_02615 [Achromobacter xylosoxidans
C54]
Length = 430
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 131/280 (46%), Positives = 185/280 (66%), Gaps = 9/280 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL-----S 271
LS++R+LDLTR++AGP+CT +LADLGA+VIKVE+PV GD+ R WGPP++ N E S
Sbjct: 15 LSHLRVLDLTRVLAGPWCTQMLADLGADVIKVERPVLGDDTRHWGPPWIVNNEGERVGDS 74
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YFT NRNK+SV +D TP GQ+++++LA+QCDV+VEN+ G L R L Y L E+N
Sbjct: 75 AYFTSANRNKRSVAIDISTPRGQELVRELARQCDVVVENYKVGDLARYGLSYSDLRELNP 134
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TG+G GP PGYD I GGL+ ITG P G P K IA D+ TG
Sbjct: 135 RLVYCSITGYGQDGPCAHLPGYDFIFQGEGGLMSITGERDDKPGGGPMKSAIAVADVLTG 194
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
L A +++A+ +++ TG GQ ID LL T V+ N A+Y G +RWG H N+
Sbjct: 195 LNATIGILSAIENRHATGNGQHIDVALLDTVVNFGANQIASYFANGSIPRRWGNEHPNLA 254
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
P+Q F T++G++ IG G+D Q++ +C+++ + D R+
Sbjct: 255 PYQTFPTADGHIIIGCGNDGQFRRLCELIGTPEMISDSRF 294
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 61/139 (43%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+++ + D R+ R NR L +E KT+ WL + P +N
Sbjct: 279 LCELIGTPEMISDSRFADVPGRNINRTALVDALERVIRTKTSRHWLDLLANSEVPNGSIN 338
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ +QVF + L ++ H + +V + S T E R PPP G+HT VL
Sbjct: 339 NYAQVFEHPQVVHRGLRVDMPHPGGATVGMVANPIRMSDTPVEYRYPPPLRGQHTAEVLA 398
Query: 121 DLLNYDETTIAKLKEKKIL 139
LLN + I L+ +I+
Sbjct: 399 SLLNKSDADIEALEANRII 417
>gi|62317169|ref|YP_223022.1| CAIB/BAIF family protein [Brucella abortus bv. 1 str. 9-941]
gi|189022429|ref|YP_001932170.1| CAIB/BAIF family protein [Brucella abortus S19]
gi|260756956|ref|ZP_05869304.1| L-carnitine dehydrogenase [Brucella abortus bv. 6 str. 870]
gi|376270767|ref|YP_005113812.1| L-carnitine dehydrogenase [Brucella abortus A13334]
gi|423168952|ref|ZP_17155654.1| hypothetical protein M17_02641 [Brucella abortus bv. 1 str. NI435a]
gi|423171615|ref|ZP_17158289.1| hypothetical protein M19_02147 [Brucella abortus bv. 1 str. NI474]
gi|423174655|ref|ZP_17161325.1| hypothetical protein M1A_02052 [Brucella abortus bv. 1 str. NI486]
gi|423176532|ref|ZP_17163198.1| hypothetical protein M1E_00794 [Brucella abortus bv. 1 str. NI488]
gi|423181044|ref|ZP_17167684.1| hypothetical protein M1G_02143 [Brucella abortus bv. 1 str. NI010]
gi|423184177|ref|ZP_17170813.1| hypothetical protein M1I_02145 [Brucella abortus bv. 1 str. NI016]
gi|423187326|ref|ZP_17173939.1| hypothetical protein M1K_02143 [Brucella abortus bv. 1 str. NI021]
gi|423189748|ref|ZP_17176357.1| hypothetical protein M1M_01429 [Brucella abortus bv. 1 str. NI259]
gi|62197362|gb|AAX75661.1| CAIB/BAIF family protein [Brucella abortus bv. 1 str. 9-941]
gi|189021003|gb|ACD73724.1| CAIB/BAIF family protein [Brucella abortus S19]
gi|260677064|gb|EEX63885.1| L-carnitine dehydrogenase [Brucella abortus bv. 6 str. 870]
gi|363401939|gb|AEW18908.1| L-carnitine dehydrogenase [Brucella abortus A13334]
gi|374536037|gb|EHR07557.1| hypothetical protein M19_02147 [Brucella abortus bv. 1 str. NI474]
gi|374538158|gb|EHR09668.1| hypothetical protein M17_02641 [Brucella abortus bv. 1 str. NI435a]
gi|374539224|gb|EHR10730.1| hypothetical protein M1A_02052 [Brucella abortus bv. 1 str. NI486]
gi|374545634|gb|EHR17094.1| hypothetical protein M1G_02143 [Brucella abortus bv. 1 str. NI010]
gi|374546477|gb|EHR17936.1| hypothetical protein M1I_02145 [Brucella abortus bv. 1 str. NI016]
gi|374553547|gb|EHR24962.1| hypothetical protein M1E_00794 [Brucella abortus bv. 1 str. NI488]
gi|374555130|gb|EHR26539.1| hypothetical protein M1K_02143 [Brucella abortus bv. 1 str. NI021]
gi|374555788|gb|EHR27193.1| hypothetical protein M1M_01429 [Brucella abortus bv. 1 str. NI259]
Length = 379
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 135/280 (48%), Positives = 182/280 (65%), Gaps = 9/280 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ R+LD++R++AGP+C +LADLGAEVIK+E+P TGD+ R WGPP++ N T +
Sbjct: 4 LTGYRVLDMSRVLAGPWCGQILADLGAEVIKIERPRTGDDTRDWGPPWMKDEQGNPTREA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+Y+ NR K SV ++ +PEGQ +++ + +CDVL+EN+ G L + L Y+ LS IN
Sbjct: 64 SYYQSANRGKFSVALNIASPEGQDLLRKMVAECDVLIENYKAGSLAKYGLDYETLSAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCSVTGFG GP PGYD I IGGL+ ITG P G P KVG+A DL TG
Sbjct: 124 GLVYCSVTGFGQTGPRAPEPGYDFIIQGIGGLMSITGERDDKPGGGPQKVGVAVADLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL + KTGKGQ ID LL QV+ L N NYL +G R+G +HAN+V
Sbjct: 184 LYSAIAIEAALLSRAKTGKGQHIDMALLDVQVAALCNQSQNYLASGRPPGRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
P+QVF+ S+ I G+D Q+ +C + L L DPR+
Sbjct: 244 PYQVFRASDRDFIIACGNDAQFVSLCDAIGLPDLPKDPRF 283
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 41/92 (44%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L L DPR+ + RV +R+ + + A + T +EW+ P +N
Sbjct: 268 LCDAIGLPDLPKDPRFTRNSDRVIHRDEIIGILAAHFLTGTADEWIGRIHPRGVPVGAIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVG 92
I++ + ++ ++ +I H D VG
Sbjct: 328 DIARTLDEPQVKARNMLVQIPHPLNKDFVTVG 359
>gi|319763876|ref|YP_004127813.1| l-carnitine dehydratase/bile acid-inducible protein f
[Alicycliphilus denitrificans BC]
gi|330823860|ref|YP_004387163.1| formyl-CoA transferase [Alicycliphilus denitrificans K601]
gi|317118437|gb|ADV00926.1| L-carnitine dehydratase/bile acid-inducible protein F
[Alicycliphilus denitrificans BC]
gi|329309232|gb|AEB83647.1| Formyl-CoA transferase [Alicycliphilus denitrificans K601]
Length = 408
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 133/281 (47%), Positives = 179/281 (63%), Gaps = 9/281 (3%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTEL 270
PL R+LD+TR++AGP+CT LADLGAEVIKVE+P GDE R WGPP++ +
Sbjct: 5 PLQKYRVLDMTRVLAGPWCTQNLADLGAEVIKVERPRLGDETRGWGPPWMPAAADSERRD 64
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
S YF NR KKSV +DF T +GQ ++KDL +QCDVLVEN+ G L R LGY L I+
Sbjct: 65 SAYFGSANRGKKSVTIDFTTAQGQALVKDLVRQCDVLVENYKAGTLARYGLGYDDLKAIH 124
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLAT 386
L+YCSVTGFG GPY +PGYD + ++ GL+ ITG P G P KVGIA D+ T
Sbjct: 125 PGLVYCSVTGFGHTGPYSHKPGYDFVFQAMSGLMSITGERDDLPGGGPQKVGIAVADITT 184
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANV 446
G+YA AV+AALL + +G+GQ +D LL ++ N NY+ +G +R+G +H+N
Sbjct: 185 GMYATVAVLAALLWREGSGQGQHLDMALLDCAMAFNSNQAVNYMASGKLPRRYGNAHSNA 244
Query: 447 VPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
VP+QVF T +G + + G+D + C+ + L D R+
Sbjct: 245 VPYQVFDTRDGQIVVAVGNDALFAAYCQAIGRPDLGADARF 285
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 59/138 (42%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C+ + L D R+ + R++NR+ L E+ + + EWL P A +N
Sbjct: 271 CQAIGRPDLGADARFAKVSGRLQNRDALLPELCRAMAGQASAEWLARLDAAGVPCAPIND 330
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
Q AD ++ + I+ + + + +S T + PP LG+HTD VL++
Sbjct: 331 FEQALADPQVRARGIETPITLHDGATFRAIASPLRFSATPLDYPAGPPTLGQHTDAVLRE 390
Query: 122 LLNYDETTIAKLKEKKIL 139
L A L+ ++
Sbjct: 391 RLGLTPQQQAALRASGVI 408
>gi|261216858|ref|ZP_05931139.1| L-carnitine dehydrogenase [Brucella ceti M13/05/1]
gi|261319725|ref|ZP_05958922.1| acyl-CoA transferase [Brucella ceti M644/93/1]
gi|260921947|gb|EEX88515.1| L-carnitine dehydrogenase [Brucella ceti M13/05/1]
gi|261292415|gb|EEX95911.1| acyl-CoA transferase [Brucella ceti M644/93/1]
Length = 413
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 134/280 (47%), Positives = 181/280 (64%), Gaps = 9/280 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ R+LD++R++AGP+C +LADLGAEVIK+E+P TGD+ R WGPP++ N T +
Sbjct: 4 LTGYRVLDMSRVLAGPWCGQILADLGAEVIKIERPRTGDDTRDWGPPWMKDEQGNPTREA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+Y+ NR K SV ++ +PEGQ +++ + +CDVL+EN+ L + L Y+ LS IN
Sbjct: 64 SYYQSANRGKFSVALNIASPEGQDLLRKMVAECDVLIENYKAASLAKYGLDYETLSAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCSVTGFG GP PGYD I IGGL+ ITG P G P KVG+A DL TG
Sbjct: 124 GLVYCSVTGFGQTGPRAPEPGYDFIIQGIGGLMSITGERDDKPGGGPQKVGVAVADLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL + KTGKGQ ID LL QV+ L N NYL +G R+G +HAN+V
Sbjct: 184 LYSAIAIEAALLSRAKTGKGQHIDMALLDVQVAALCNQSQNYLASGRPPGRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
P+QVF+ S+ I G+D Q+ +C + L L DPR+
Sbjct: 244 PYQVFRASDRDFIIACGNDAQFVSLCDAIGLPDLPKDPRF 283
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L L DPR+ + RV +R+ + + A + T +EW+ S P +N
Sbjct: 268 LCDAIGLPDLPKDPRFTRNSDRVIHRDEIIGILAAHFLTGTADEWIGRIHPRSVPVGAIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I++ + ++ ++ +I H D VG + S T E + P LGEHTD +L+
Sbjct: 328 DIARALDEPQVKARNMLVQIPHPLNKDFVTVGSPIKLSGTPVEYKRAAPMLGEHTDTLLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
L D+ + LK + I+
Sbjct: 388 QLAKLDDDRLNDLKSRGII 406
>gi|254463809|ref|ZP_05077220.1| L-carnitine dehydratase/bile acid-inducible protein F
[Rhodobacterales bacterium Y4I]
gi|206684717|gb|EDZ45199.1| L-carnitine dehydratase/bile acid-inducible protein F
[Rhodobacterales bacterium Y4I]
Length = 400
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 131/290 (45%), Positives = 189/290 (65%), Gaps = 6/290 (2%)
Query: 206 LALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTG-DECRKWGPPF 264
+A S P L V++LDL+RI+AGP CT LL DLGA VIKVE P TG D+ R+WGPP+
Sbjct: 2 MAASDMLPHGALKGVKVLDLSRILAGPTCTQLLGDLGATVIKVENPKTGGDDTRQWGPPY 61
Query: 265 L-----NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRL 319
+ N ++LS YF NRNK+SV +D T +GQQ I+ LA + D+L+ENF PG L +
Sbjct: 62 VMDADGNQSDLSAYFMAANRNKRSVAIDIATEDGQQAIRRLAAEADILIENFKPGGLAKY 121
Query: 320 NLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGI 379
L Y L + LIYCS++G+G GP +PGYDI+A GG++ +TG P+G P K G+
Sbjct: 122 ELDYASLKDEFPSLIYCSISGYGQTGPNSHKPGYDIMAQGFGGIMSLTGEPEGQPMKAGV 181
Query: 380 ASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRW 439
D+ G+YA +++AL H+ KTG+GQ+ID L+ Q++ LIN G YLN G KR
Sbjct: 182 GIADVMCGMYACIGILSALHHREKTGEGQQIDLALVDAQIAWLINEGVAYLNTGQNPKRR 241
Query: 440 GTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
G H +++P+ V++T++G+V + G+D Q++ + + L+ LA D R+ T
Sbjct: 242 GNEHPSIMPYGVYETADGHVILAVGNDSQFRRFMEFLKLEGLAEDARFAT 291
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 5/120 (4%)
Query: 3 KVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSI 62
+ + L+ LA D R+ T R+ NR+ L + TT+ L + P V ++
Sbjct: 276 EFLKLEGLAEDARFATNPARLHNRDALNAILIPAVQRFTTDTVLAAMEDRKVPAGPVQTL 335
Query: 63 SQVFADEHI--QDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+FA + + + + ++ + G +K++G + +S T R PPA GE T +L
Sbjct: 336 DTLFATSQVAARGMAIGRDTAA---GPVKLLGNPLKFSRTPVTYRHAPPACGEGTGEILS 392
>gi|420253025|ref|ZP_14756091.1| putative acyl-CoA transferase/carnitine dehydratase [Burkholderia
sp. BT03]
gi|398052859|gb|EJL45097.1| putative acyl-CoA transferase/carnitine dehydratase [Burkholderia
sp. BT03]
Length = 412
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 128/282 (45%), Positives = 185/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
L +R+LDL+R++AGP+ + LLADLGA+V+KVE+P TGD+ R WGPP+L++ T S
Sbjct: 10 LDGLRVLDLSRVLAGPWASQLLADLGADVVKVERPGTGDDTRAWGPPWLSDEDGESTGES 69
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ C NRNK+SV +D P+GQ+++KDLA + DV+VENF G L + L Y L E+N
Sbjct: 70 AYYLCANRNKRSVTIDLSEPDGQRLVKDLASKADVVVENFKVGGLSQYGLDYASLKELNP 129
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+L+YCS+TGFG GPY R GYD + +GGL+ +TG DG P KVG+A D+ TG
Sbjct: 130 RLVYCSITGFGQTGPYAARVGYDFLIQGMGGLMSLTGRADGTEGDGPLKVGVALTDITTG 189
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA A++AAL + ++G GQ ID LL Q++ L N NY+ G+ +R G +H N+V
Sbjct: 190 LYATVAILAALARRERSGIGQHIDLALLDVQIACLANQATNYIVGGVVPRRIGNAHPNIV 249
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F T++G++ I G+D Q+ +C + D R+ +
Sbjct: 250 PYQDFPTADGHMIIAVGNDSQFASLCTALGKPEWGKDERFAS 291
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 66/139 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + D R+ + RV+NR L I T+ + T +W+ + P +N
Sbjct: 274 LCTALGKPEWGKDERFASNPRRVKNRNELIAMICGITVSRATGDWIAAMEAAGVPCGPIN 333
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ QVF D +Q + E+SH + +V + S + + R PP LG+HT VL+
Sbjct: 334 NLDQVFEDPQVQSRNVRIEMSHPLAKHVALVANPIRMSESPVQYRQSPPTLGQHTGEVLQ 393
Query: 121 DLLNYDETTIAKLKEKKIL 139
D L+ I +L+ K+L
Sbjct: 394 DWLDMAAADIDELRRTKLL 412
>gi|443474173|ref|ZP_21064194.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
pseudoalcaligenes KF707]
gi|442905108|gb|ELS30023.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
pseudoalcaligenes KF707]
Length = 407
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 187/294 (63%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIKVE+P GD+ R WGPPFL +T +
Sbjct: 5 LSHIRVLDLSRVLAGPWSGQILADLGAEVIKVERPGAGDDTRAWGPPFLKGADGRDTSEA 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NRNK+SV +DF PEGQ ++++LA + D+L+ENF G L L Y+ L +N
Sbjct: 65 AYFLSANRNKQSVTIDFTKPEGQALVRELASRSDILIENFKVGGLAAYGLDYESLKALNP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ ITG D P KVG+A D+ TG
Sbjct: 125 RLIYCSITGFGQFGPYAKRAGYDFMIQGLGGLMSITGRSDQEEGAGPVKVGVALTDILTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL + TGKGQ ID LL QV+ L N N+L G +R G +H N+V
Sbjct: 185 LYSSVAMLAALASRELTGKGQHIDMALLDVQVACLANQAMNFLTTGNPPRRLGNAHPNIV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ C+V + A DPR+ T +A + LI
Sbjct: 245 PYQDFPTADGDFILTVGNDGQFRKFCEVAGHREWADDPRFSTNKARVAHRAELI 298
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 71/139 (51%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V + A DPR+ T RV +R L I T+ KTT EW+ + V P +N
Sbjct: 269 FCEVAGHREWADDPRFSTNKARVAHRAELIPLIRQATVFKTTAEWVAALEAVGVPCGPIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ VFAD +Q L E+ H G + V + S T E R PPP LGEHTD VL
Sbjct: 329 DLAAVFADPQVQARGLRVELEHALAGVVPQVASPLRLSETPVEYRLPPPLLGEHTDQVLA 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L E IA+L ++++
Sbjct: 389 RVLGLTEERIAQLHREQVI 407
>gi|389693452|ref|ZP_10181546.1| putative acyl-CoA transferase/carnitine dehydratase [Microvirga sp.
WSM3557]
gi|388586838|gb|EIM27131.1| putative acyl-CoA transferase/carnitine dehydratase [Microvirga sp.
WSM3557]
Length = 390
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 126/290 (43%), Positives = 186/290 (64%), Gaps = 4/290 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE----LS 271
PL +++L+L RI+AGP+ LLADLGA+V+KVE+P GD+ R WGPPF+ E +
Sbjct: 3 PLEGLKVLELARILAGPWVGQLLADLGADVVKVERPGAGDDTRGWGPPFVEGAEGEHLSA 62
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NR K+S+ VDF+TPEGQ++++ LA DV++ENF G L + L Y+ L +N
Sbjct: 63 AYFHSCNRGKRSIAVDFETPEGQELVRKLASHADVVIENFKVGGLKKYGLDYESLKAVNP 122
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+L+YCS+TGFG GPY R GYD + +GG++ +TG PDG P K+G+A +D+ TG+Y+
Sbjct: 123 RLVYCSITGFGQDGPYASRAGYDFMIQGLGGIMDLTGDPDGEPQKIGVAYVDIFTGVYSV 182
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
++AAL + TG+G +D LL Q S+L N NYL +G +R G +H N+VP+QV
Sbjct: 183 VGILAALRKRDVTGEGAHLDMALLDVQTSVLANQAMNYLASGKSPRRMGNAHPNIVPYQV 242
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
F ++G+V + G+D Q+ V+ LA D R+ T A + + L+
Sbjct: 243 FPVADGHVIVAVGNDGQFGRFVSVLGRPELAQDERFRTNAGRVGHRAELV 292
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 52/123 (42%), Gaps = 2/123 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
V+ LA D R+ T A RV +R L + T+ T E+ L + P +N
Sbjct: 263 FVSVLGRPELAQDERFRTNAGRVGHRAELVPVLTELTLHFTREDLLAALEKQGVPAGPIN 322
Query: 61 SISQVFADEHI--QDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
+++ VF D + + +K+ + G I V + P P LGEHTD V
Sbjct: 323 TVADVFDDPQVIARGMKIDLSSQAARGGAIPSVRSPIVMDGQAMAASRPSPRLGEHTDEV 382
Query: 119 LKD 121
L D
Sbjct: 383 LGD 385
>gi|319780010|ref|YP_004139486.1| L-carnitine dehydratase/bile acid-inducible protein F
[Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317165898|gb|ADV09436.1| L-carnitine dehydratase/bile acid-inducible protein F
[Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 423
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 127/283 (44%), Positives = 191/283 (67%), Gaps = 3/283 (1%)
Query: 207 ALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN 266
A ++E LPL +++LDL+R++AGP+ TM LADLGAE+ K+E GD+ R W P
Sbjct: 9 AGTAEPARLPLEGIKVLDLSRVLAGPWATMSLADLGAEIWKIENIDGGDDTRAWSVPSYK 68
Query: 267 NTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHL 326
+STY+ C NR K+S+ +D K+P+G I+++LA + D++VENF G DRL +G+K L
Sbjct: 69 G--VSTYYLCANRGKQSIALDMKSPQGLAIVRELAAKADIVVENFRSGTADRLGVGFKEL 126
Query: 327 SEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLAT 386
S N +LIYCS++G+G GP RPGYD + + GL+ ITG +G P +VG+A D+
Sbjct: 127 SASNPRLIYCSISGYGQTGPDAGRPGYDFVMQAESGLMAITGESNGEPMRVGVAITDIVC 186
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANV 446
G+ A +++AAL + TGKGQ +D +L+ +S+LINVG+ YLN G E R+G +H V
Sbjct: 187 GMVATQSILAALYERATTGKGQFLDLSLIDCALSLLINVGSGYLNTGQEVARYGNAHPTV 246
Query: 447 VPHQVFKTSNGYVTIGTGSDKQYQDMC-KVMNLQHLALDPRYL 488
VP+Q+F+ S+G + G+D+Q+ +C KV++L HLA D R++
Sbjct: 247 VPYQIFEASDGSFALAVGNDRQFAALCEKVVDLPHLAGDARFI 289
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 72/150 (48%), Gaps = 3/150 (2%)
Query: 3 KVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSI 62
KV++L HLA D R++ R NRE L ++ A K + W+ S P V SI
Sbjct: 275 KVVDLPHLAGDARFIKAGARATNREALIPQLAAVFKTKPRDHWMATCAAASVPAGTVKSI 334
Query: 63 SQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDL 122
+VF ++++ LV+ + H G + +V PA + T PP LG+ T VL D+
Sbjct: 335 PEVFDSSNVRERGLVQTLPHPHLGSVAMVRPAQGLAAQLTADFTAPPMLGQDTAAVLADV 394
Query: 123 LNYDETTIAKLKEKKILGLIERLTKNADPV 152
L Y I +L +G+ T A+P+
Sbjct: 395 LGYSAEIIDQLIGTGAIGV---YTPAAEPI 421
>gi|445397918|ref|ZP_21429442.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-57]
gi|444783976|gb|ELX07811.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-57]
Length = 409
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 131/281 (46%), Positives = 182/281 (64%), Gaps = 9/281 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ N T S
Sbjct: 4 LQGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPRVGDDTRMWGPPWMPDQDGNMTRES 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF C NRNK SV VD TPEGQ +I ++AK DV++EN+ G L + L Y LSE+N
Sbjct: 64 GYFQCTNRNKYSVAVDITTPEGQALIYEIAKTADVVIENYKTGSLAKYGLDYASLSELNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
++YCS+TGFG GP + PGYD I + GL+ ITG PD G KVG+A +D+ TG
Sbjct: 124 NIVYCSITGFGQDGPRAEEPGYDFIIQGMSGLMSITGEPDDVAGGGAQKVGVAVVDIQTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AAL+ + TG+GQ ID +LL QV+ L N G NYL +G +R G H ++V
Sbjct: 184 LYSTIAIQAALIARSHTGRGQYIDMSLLDVQVAALANQGMNYLASGKAPQRMGNQHPSIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYL 488
P+Q FK + I G+DKQ++D+C + L + +++
Sbjct: 244 PYQTFKAKDKEFIIACGNDKQFKDLCIAIGYSELLENEKFV 284
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 2/139 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L + +++ RV+ R+ L + ++KT +EW+ + + P +N
Sbjct: 268 LCIAIGYSELLENEKFVRNQDRVKYRDELIPLLSEHFLQKTAKEWVDMIHALKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI A+ I LV I H + + +G + S T E PP LGEHT +L
Sbjct: 328 SIEDALAEPQIVHRNLVVNIPHRLNENFQTIGSPIKLSDTPVEYHHAPPELGEHTAQILS 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+E +A LKEK I+
Sbjct: 388 RFKTAEE--LAALKEKGII 404
>gi|293609180|ref|ZP_06691483.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292829753|gb|EFF88115.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 409
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 131/266 (49%), Positives = 176/266 (66%), Gaps = 9/266 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ N T S
Sbjct: 4 LQGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPRVGDDTRMWGPPWMPDQDGNMTRES 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF C NRNK SV VD TPEGQ +I ++AK DV++EN+ G L + L Y LSE+N
Sbjct: 64 GYFQCTNRNKYSVAVDITTPEGQALIYEIAKTADVVIENYKTGSLAKYGLDYASLSELNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
+IYCS+TGFG GP + PGYD I + GL+ ITG PD G KVG+A +D+ TG
Sbjct: 124 NIIYCSITGFGQDGPRAEEPGYDFIIQGVSGLMSITGEPDDVVGGGAQKVGVAVVDIQTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AAL+ + TG+GQ ID +LL QV+ L N G NYL +G +R G H ++V
Sbjct: 184 LYSTIAIQAALIARSHTGRGQYIDMSLLDVQVAALANQGMNYLASGKAPQRMGNQHPSIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMC 473
P+Q FK + I G+DKQ++D+C
Sbjct: 244 PYQTFKAKDKEFIIACGNDKQFKDLC 269
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 2/139 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L + +++ RV+ R+ L + ++KT +EW+ + + P +N
Sbjct: 268 LCIGIGYSELLENEKFVRNQDRVKYRDELIPLLSEHFLQKTAKEWVEMIHALKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI + A+ I LV I H + + +G + S T E PP LGEHT +L
Sbjct: 328 SIEEALAEPQIVHRNLVVNIPHRLNENFQTIGSPIKLSDTPVEYHHAPPELGEHTAQILS 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+E +A LKEK I+
Sbjct: 388 RFKTAEE--LATLKEKGII 404
>gi|445449021|ref|ZP_21444113.1| CoA-transferase family III protein [Acinetobacter baumannii
WC-A-92]
gi|444757231|gb|ELW81759.1| CoA-transferase family III protein [Acinetobacter baumannii
WC-A-92]
Length = 405
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 133/284 (46%), Positives = 188/284 (66%), Gaps = 9/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ +T+ +
Sbjct: 4 LNGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPKVGDDTRSWGPPWMKDDSGQDTQEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK SV +D + EGQ++IK L + DV++EN+ G L + L Y+ LS IN
Sbjct: 64 AYYQSTNRNKLSVAIDIASSEGQELIKALIQDTDVVIENYKAGSLKKYGLDYESLSVINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TGFG GP + PGYD I +GGL+ +TG P G P KVG+A DLATG
Sbjct: 124 KLVYCSITGFGQTGPRAEEPGYDFIIQGMGGLMSVTGERDDLPGGGPQKVGVAFSDLATG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL+++ TG GQ ID LL Q++ + N G NYL++G KR+G +HAN+V
Sbjct: 184 LYSTIAIQAALLNRHVTGLGQYIDMALLDVQIATMANQGMNYLSSGNIPKRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P+QVFK S+ I G+D Q+ +C + L L D R+ A
Sbjct: 244 PYQVFKASDRDFIIACGNDTQFIQLCHSIGLPDLPNDARFARNA 287
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 77/140 (55%), Gaps = 2/140 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L L D R+ A R+++RE + + + KT +EW+ + P +N
Sbjct: 268 LCHSIGLPDLPNDARFARNADRIKHREEIIGILSKHFLTKTADEWVDVIYAAKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q F + + +++ E++H + +K++G + S T E +T PP LGEHT VL
Sbjct: 328 NLEQAFQEPQVIAREMLVEMNHPQREKLKVIGSPIKLSRTPVEYKTAPPLLGEHTQAVLG 387
Query: 121 DLLNYDETTIAKLKEKKILG 140
+++ ++ +A+LKEK ++G
Sbjct: 388 RIVSSEK--LAELKEKGVIG 405
>gi|238563869|ref|ZP_00438138.2| caib/baif family protein [Burkholderia mallei GB8 horse 4]
gi|238519795|gb|EEP83262.1| caib/baif family protein [Burkholderia mallei GB8 horse 4]
Length = 430
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 128/254 (50%), Positives = 176/254 (69%), Gaps = 9/254 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
LS++R+LDL+R++AGP+C LADLGA+VIKVE+P GD+ R WGPP+L +T +
Sbjct: 175 LSHIRVLDLSRVLAGPWCAQTLADLGADVIKVERPECGDDTRHWGPPYLKTPDGADTREA 234
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV VD TPEGQ+II++LA QCDV++EN+ G+L + L Y L+ +
Sbjct: 235 AYYLAANRNKRSVTVDIATPEGQRIIRELAAQCDVVLENYKVGQLAKYGLDYASLAAVKP 294
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCSVTGFG GPY R GYD I +GG + ITG P G P K G+A DLATG
Sbjct: 295 GLVYCSVTGFGQTGPYAHRAGYDFIIQGMGGFMSITGERDGLPGGGPQKAGVAIADLATG 354
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ +TG+GQ ID LL QV++L N+ N+L +G RWG +H N+V
Sbjct: 355 LYSTIAILAALAHRDRTGEGQHIDMALLDVQVALLANMNTNFLASGKPPVRWGNAHPNIV 414
Query: 448 PHQVFKTSNGYVTI 461
P+Q F+TS+G++ +
Sbjct: 415 PYQTFETSDGWIIV 428
>gi|393760209|ref|ZP_10349021.1| hypothetical protein QWA_13832 [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
gi|393162021|gb|EJC62083.1| hypothetical protein QWA_13832 [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
Length = 410
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 131/277 (47%), Positives = 187/277 (67%), Gaps = 5/277 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TEL 270
PL+ +R+LDLTR++AGP+CT LADLGAEVIKVE+P TGD+ R WGPP+L + TE
Sbjct: 9 PLAGLRVLDLTRVLAGPWCTQNLADLGAEVIKVERPGTGDDTRGWGPPYLKDGHRADTED 68
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
+ YF NRNK+S+ +D T +G +++ L ++CD+LVENF G L + L Y+ L IN
Sbjct: 69 AAYFGAANRNKESIVLDIGTAQGADLVRQLVRRCDILVENFKVGGLKKYGLDYESLQAIN 128
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYA 390
LIYCS+TGFG GPY RPGYD + +GGL+ +TG P G P K G+A D+ TG+YA
Sbjct: 129 PALIYCSITGFGQTGPYASRPGYDFMIQGLGGLMSLTGEPRGEPQKAGVAVADVMTGMYA 188
Query: 391 HGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQ 450
AV+AA++ ++++G GQ +D LL QV+M+ N NYL G +R G +H N+VP+Q
Sbjct: 189 TVAVLAAVVERHRSGLGQHLDIALLDCQVAMMANQNMNYLCTGQAPQRPGNAHQNLVPYQ 248
Query: 451 VFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
VF+ S+G++ + G+D Q++ + + A DPR+
Sbjct: 249 VFEASDGHLIVAVGNDAQFRSFAQELGHPEWADDPRF 285
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 55/113 (48%)
Query: 11 ALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEH 70
A DPR+ + RV +R+ L + + +T + WL + V P +N++ QV+ D
Sbjct: 280 ADDPRFSRNSGRVMHRDELVPMLAQVMLSRTRDSWLQALEAVGIPAGPINTMEQVYQDPQ 339
Query: 71 IQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLL 123
+ L ++ + G + V + S T + R+ PP LGEHT VL +L
Sbjct: 340 VLARGLRLDLPTGQGGSVPSVASPLRLSATPVQYRSAPPRLGEHTREVLARVL 392
>gi|83950889|ref|ZP_00959622.1| Putative acyl-CoA transferase/carnitine dehydratase [Roseovarius
nubinhibens ISM]
gi|83838788|gb|EAP78084.1| Putative acyl-CoA transferase/carnitine dehydratase [Roseovarius
nubinhibens ISM]
Length = 368
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 132/278 (47%), Positives = 181/278 (65%), Gaps = 3/278 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN--NTELSTY 273
PL +++++L RI+AGP+ L+DLGA+VIKVE P GD+ R WGPPF+ + + Y
Sbjct: 4 PLDGLKVIELARILAGPWAGQTLSDLGADVIKVESPA-GDDTRNWGPPFIEREDDRSAAY 62
Query: 274 FTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQL 333
F NR K SV VDF+T EGQ ++++ + D+L+ENF G L++ L Y L EIN +L
Sbjct: 63 FHGCNRGKTSVAVDFRTEEGQAQVREMVRDADILIENFKVGGLEKYGLDYASLREINPRL 122
Query: 334 IYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGA 393
IYCS+TGFG GPY R GYD I + GL+ ITG P G P KVG+A D+ TG+YA A
Sbjct: 123 IYCSITGFGQDGPYAHRAGYDYIIQGMSGLMSITGDPAGQPQKVGVAITDVFTGVYATTA 182
Query: 394 VMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFK 453
++AAL + +TG+GQ+ID LL V++ N NYL+ G +R G H N+ P+QVF
Sbjct: 183 ILAALHQRERTGEGQQIDMALLDVAVAVTANQAMNYLSTGDAPQRMGNYHPNLSPYQVFD 242
Query: 454 TSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
S+G++ I TG+D QYQ +C ++ L LA P YLT A
Sbjct: 243 CSDGHIIIATGNDPQYQRLCDLLGLPELAQAPEYLTNA 280
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ L LA P YLT A RV+NRE L + A + + L + P +N
Sbjct: 261 LCDLLGLPELAQAPEYLTNADRVKNREALTARLNAASARYSKAALLAACEAQGVPAGPIN 320
Query: 61 SISQVFADEHIQ 72
+ +VFAD +Q
Sbjct: 321 DMDEVFADPQVQ 332
>gi|33601241|ref|NP_888801.1| hypothetical protein BB2258 [Bordetella bronchiseptica RB50]
gi|410472792|ref|YP_006896073.1| hypothetical protein BN117_2136 [Bordetella parapertussis Bpp5]
gi|412337424|ref|YP_006966179.1| hypothetical protein BN112_0086 [Bordetella bronchiseptica 253]
gi|427815115|ref|ZP_18982179.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
gi|33575676|emb|CAE32754.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
gi|408442902|emb|CCJ49469.1| conserved hypothetical protein [Bordetella parapertussis Bpp5]
gi|408767258|emb|CCJ52004.1| conserved hypothetical protein [Bordetella bronchiseptica 253]
gi|410566115|emb|CCN23675.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
Length = 407
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 135/282 (47%), Positives = 183/282 (64%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L ++++LDLTRI+AGP+ T LAD+GAEV+KVE+P GD+ R WGPPFL N T S
Sbjct: 5 LGHIKVLDLTRILAGPWATQTLADMGAEVVKVERPRVGDDTRAWGPPFLKDSEGNETADS 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+YF NR KKS+ VD P+GQ +I+DLA DV+VEN+ G L R L Y+ L IN
Sbjct: 65 SYFLAANRGKKSITVDLAHPDGQALIRDLAATADVVVENYKVGTLARYGLDYESLKAINP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+L+YCS+TGFG GPY PGYD + +GGL+ ITG P+G P KVGIA DL TG
Sbjct: 125 RLVYCSITGFGQDGPYASLPGYDFVFQGMGGLMSITGQPEGTPGDEPMKVGIAISDLLTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA A++AAL ++ +G GQ +D +LL VS+ N+ +G +R G +H+N+V
Sbjct: 185 MYATTAILAALERRHVSGTGQHVDMSLLDCVVSISSYQAINHFLSGKIPRRMGNAHSNMV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+QVF+ G V + G+D QY+ +CK++ LA D RY T
Sbjct: 245 PYQVFRCKEGDVIVAVGNDGQYRALCKLIERDDLATDERYAT 286
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 63/136 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK++ LA D RY T R NR+ L EI + +T +EW+ + + + P +
Sbjct: 269 LCKLIERDDLATDERYATPGQRNRNRDTLIPEIAQAMLARTMQEWVALMEAANVPCGPIY 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q+F D H+Q + + H V + S T + P LGEHTD VL
Sbjct: 329 NMQQMFEDPHVQHRGMRLSLPHSAGVQAPAVASPIRLSDTPIQYGRSAPLLGEHTDSVLA 388
Query: 121 DLLNYDETTIAKLKEK 136
L IA+L+ +
Sbjct: 389 QRLGLAPARIAELRAR 404
>gi|357976699|ref|ZP_09140670.1| L-carnitine dehydratase/bile acid-inducible protein F [Sphingomonas
sp. KC8]
Length = 411
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 129/277 (46%), Positives = 182/277 (65%), Gaps = 5/277 (1%)
Query: 220 VRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-TELSTYFTCVN 278
+++LDL+R++AGP+ T +L DLGAEV K+EQP GD+ R WGPPFL++ + + Y+ +N
Sbjct: 1 MKVLDLSRVLAGPWATQMLGDLGAEVFKIEQPGKGDDTRHWGPPFLDDGSNDAAYYLAIN 60
Query: 279 RNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSV 338
RNK+S+ +D PEG +++ LA CD++VENF G L + L Y LS LIYCS+
Sbjct: 61 RNKQSLAIDLAQPEGAALVRRLAMACDIVVENFRVGGLAKYGLDYNTLSAAKPGLIYCSI 120
Query: 339 TGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATGLYAHGAV 394
TGFG GPY DR GYD + + GL+ +TG PDG P KVG+ DL TGL+A A+
Sbjct: 121 TGFGQDGPYADRGGYDFLVQGMSGLMSVTGRPDGEPGAGPMKVGVPVSDLFTGLHAVIAI 180
Query: 395 MAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKT 454
AAL H+ T +GQ IDC LL TQV++L N +N+LN G+ R G H NVVP++ F+T
Sbjct: 181 QAALRHRDATDEGQHIDCALLDTQVNILANQASNWLNGGMVPGRLGNDHPNVVPYRDFRT 240
Query: 455 SNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
++G V + G+D+Q+ C+++ L L DPR+ A
Sbjct: 241 ADGNVLVALGNDRQFFRFCRLLGLDGLTEDPRFRNNA 277
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 67/140 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+++ L L DPR+ A R NR L +E+ T+ E + + P VN
Sbjct: 258 FCRLLGLDGLTEDPRFRNNASRAANRPALMAALESAIATWTSAELIAAMEQEGLPGGPVN 317
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI Q+F D I+ +LV+ + + +++ G S T R PP LGE TD VL
Sbjct: 318 SIPQIFDDPQIKARQLVQTLHRDTGAQVRVPGFPARLSRTPATYRQAPPRLGEDTDDVLA 377
Query: 121 DLLNYDETTIAKLKEKKILG 140
+ L D IA+L+ ILG
Sbjct: 378 EQLGLDGGEIARLRAAGILG 397
>gi|403675077|ref|ZP_10937274.1| L-carnitine dehydrogenase [Acinetobacter sp. NCTC 10304]
Length = 409
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 131/281 (46%), Positives = 182/281 (64%), Gaps = 9/281 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ N T S
Sbjct: 4 LQGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPRVGDDTRMWGPPWMPDQDGNMTRES 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF C NRNK SV VD TPEGQ +I ++AK DV++EN+ G L + L Y LSE+N
Sbjct: 64 GYFQCTNRNKYSVAVDITTPEGQTLIYEIAKTADVVIENYKTGSLAKYGLDYASLSELNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
++YCS+TGFG GP + PGYD I + GL+ ITG PD G KVG+A +D+ TG
Sbjct: 124 NIVYCSITGFGQDGPRAEEPGYDFIIQGMSGLMSITGEPDDVAGGGAQKVGVAVVDIQTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AAL+ + TG+GQ ID +LL QV+ L N G NYL +G +R G H ++V
Sbjct: 184 LYSTIAIQAALIARSHTGRGQYIDMSLLDVQVAALANQGMNYLASGKAPQRMGNQHPSIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYL 488
P+Q FK + I G+DKQ++D+C + L + +++
Sbjct: 244 PYQTFKAKDKEFIIACGNDKQFKDLCIAIGYSELLENEKFV 284
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 62/139 (44%), Gaps = 2/139 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L + +++ RV+ R L + + KT +EW+ + + P +N
Sbjct: 268 LCIAIGYSELLENEKFVRNQDRVKFRNELIPLLSEHFLRKTAKEWVDMIHALKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI A+ I LV I H + + +G + S T E PP LGEHT +L
Sbjct: 328 SIEDALAEPQIVHRNLVVNIPHRLNENFQTIGSPIKLSDTPVEYHHAPPELGEHTAQILS 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+E +A LKEK I+
Sbjct: 388 RFKTAEE--LATLKEKGII 404
>gi|402702068|ref|ZP_10850047.1| CoA-transferase [Pseudomonas fragi A22]
Length = 406
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 129/282 (45%), Positives = 184/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIKVE+P GD+ R WGPPFL + T +
Sbjct: 4 LSHLRVLDLSRVLAGPWAGQILADLGAEVIKVERPGNGDDTRAWGPPFLKDAYGESTGEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++++LA + D+L+ENF G L+ L Y L +N
Sbjct: 64 AYYLSANRNKQSVTIDFTKPEGQRLVRELAAKSDILIENFKVGGLEAYGLDYGSLKALNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 ELIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPEGDEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ + G GQ ID LL QV+ L N NYL G+ +R G +H N+V
Sbjct: 184 LYSTVAILAALAHRQQGGHGQHIDMALLDVQVACLANQAMNYLTTGVAAQRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F T++G + G+D Q++ +V + DPR+ +
Sbjct: 244 PYQDFPTADGDFILTVGNDSQFRKFAEVAGRPEWSDDPRFAS 285
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 65/127 (51%)
Query: 13 DPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEHIQ 72
DPR+ + RV NR +L I T+ KTT EW+ + V P +N ++QVFAD +Q
Sbjct: 280 DPRFASNKQRVANRAVLVPLIRQATVFKTTAEWVSQLEAVGVPCGPINDLAQVFADPQVQ 339
Query: 73 DIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETTIAK 132
L ++ H G + V + S T E R PP LGEHT VL+ +L D +
Sbjct: 340 ARGLSMQLPHALAGLVPQVASPIRLSETPVEYRNAPPLLGEHTQQVLERVLGLDHGMVEA 399
Query: 133 LKEKKIL 139
L+E +L
Sbjct: 400 LREAGVL 406
>gi|33600028|ref|NP_887588.1| hypothetical protein BB1040 [Bordetella bronchiseptica RB50]
gi|412339709|ref|YP_006968464.1| hypothetical protein BN112_2407 [Bordetella bronchiseptica 253]
gi|427813269|ref|ZP_18980333.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
gi|33567626|emb|CAE31539.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
gi|408769543|emb|CCJ54324.1| conserved hypothetical protein [Bordetella bronchiseptica 253]
gi|410564269|emb|CCN21813.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
Length = 402
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 132/279 (47%), Positives = 177/279 (63%), Gaps = 9/279 (3%)
Query: 222 ILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE-----LSTYFTC 276
+LDLTRI+AGP+CT +LAD GA VIKVE+P GD+ R WGPP++ + STYF
Sbjct: 2 VLDLTRILAGPWCTQILADFGARVIKVERPGVGDDTRSWGPPWMPGADGEQARHSTYFAA 61
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
NRNK+SV VD T EGQ+I++ LA + DVL+ENF G L R L Y LS +N +L+YC
Sbjct: 62 ANRNKQSVSVDIATAEGQEIVRALAMRADVLIENFKVGDLARHGLDYASLSAVNPRLVYC 121
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITG----HPDGPPCKVGIASIDLATGLYAHG 392
S+TG+G GPY DRPGYD+I GGL+ +TG P G P KVG+A D+ TG+YA
Sbjct: 122 SITGYGQTGPYADRPGYDLIFQGEGGLMSVTGERDDRPGGGPQKVGVAIADIVTGMYASS 181
Query: 393 AVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVF 452
AV+AAL + TG GQ ID LL + N+ N++ G R+G +H +VP++V
Sbjct: 182 AVLAALQRRAATGAGQYIDIALLDCMAAFGANLAFNHVATGAVPPRYGNAHPTLVPYEVL 241
Query: 453 KTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
S+G+V + G+D Q++ C + LA D RY TG+
Sbjct: 242 AASDGHVIVAAGNDAQWRRFCAALGRPDLAADARYATGS 280
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 59/140 (42%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C + LA D RY TG+ R+ +R+ L EI + WL P ++N
Sbjct: 261 FCAALGRPDLAADARYATGSGRIVHRDALMPEIARTFATEPAAHWLARLTEHGIPNGRIN 320
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
QVF + + E+ + + V V +S + R PALG+HT VL
Sbjct: 321 DYKQVFEHPQLLHRGMRVEMPDGEGNPVAGVANPVKFSASAVAYRHAAPALGQHTREVLC 380
Query: 121 DLLNYDETTIAKLKEKKILG 140
LL DE + L + +LG
Sbjct: 381 GLLRMDEARVQALAARGVLG 400
>gi|424779075|ref|ZP_18206008.1| hypothetical protein C660_19527 [Alcaligenes sp. HPC1271]
gi|422886097|gb|EKU28528.1| hypothetical protein C660_19527 [Alcaligenes sp. HPC1271]
Length = 410
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 131/281 (46%), Positives = 187/281 (66%), Gaps = 5/281 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TEL 270
PL+ +R+LDLTR++AGP+CT LADLGAEVIKVE+P GD+ R WGPP+L + TE
Sbjct: 9 PLAGLRVLDLTRVLAGPWCTQNLADLGAEVIKVERPGAGDDTRGWGPPYLQDGHRADTED 68
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
+ YF NRNK+S+ +D T +G ++++ L +CD+LVENF G L + L Y+ L IN
Sbjct: 69 AAYFGAANRNKESIILDIGTAQGAEVVRQLVSRCDILVENFKVGGLKKYGLDYESLQAIN 128
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYA 390
LIYCS+TGFG GPY RPGYD + +GGL+ +TG P G P K G+A D+ TG+YA
Sbjct: 129 PALIYCSITGFGQTGPYASRPGYDFMIQGLGGLMSLTGEPGGEPQKAGVAVADVMTGMYA 188
Query: 391 HGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQ 450
AV+AA++ ++++G GQ +D LL QV+M+ N NYL G +R G +H N+VP+Q
Sbjct: 189 TVAVLAAVVERHRSGLGQHLDIALLDCQVAMMANQNMNYLCTGQAPQRPGNAHQNLVPYQ 248
Query: 451 VFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
VF+ S+G++ + G+D Q++ + + A DPR+ A
Sbjct: 249 VFEASDGHLIVAVGNDAQFRSFARELGHPEWADDPRFARNA 289
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 55/123 (44%)
Query: 11 ALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEH 70
A DPR+ A RV +R+ L + + + WL + V P +N++ QV+ D
Sbjct: 280 ADDPRFARNAGRVMHRDELVPMLAQIMRSRRRDSWLQTLEAVGIPAGPINTMEQVYQDPQ 339
Query: 71 IQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETTI 130
+ L ++ + G + V + S T + R+ PP LGEHT VL +L +
Sbjct: 340 VLARGLRLDLPTGQGGSVPSVASPLRLSATPVQYRSAPPRLGEHTREVLARVLELSPDKV 399
Query: 131 AKL 133
L
Sbjct: 400 EAL 402
>gi|417548588|ref|ZP_12199669.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-18]
gi|417565372|ref|ZP_12216246.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC143]
gi|395557128|gb|EJG23129.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC143]
gi|400388887|gb|EJP51959.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-18]
Length = 409
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 131/281 (46%), Positives = 183/281 (65%), Gaps = 9/281 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ N T S
Sbjct: 4 LQGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPRVGDDTRMWGPPWMPDQDGNMTRES 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF C NRNK SV VD TPEGQ +I ++AK DV++EN+ G L + L Y LSE+N
Sbjct: 64 GYFQCTNRNKYSVAVDITTPEGQALIYEIAKTADVVIENYKTGSLAKYGLDYASLSELNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
++YCS+TGFG GP + PGYD I + GL+ ITG PD G KVG+A +D+ TG
Sbjct: 124 NIVYCSITGFGQDGPRAEEPGYDFIIQGMSGLMSITGEPDDVAGGGAQKVGVAVVDIQTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AAL+ + TG+GQ ID +LL QV+ L N G NYL +G +R G H ++V
Sbjct: 184 LYSTIAIQAALIARSHTGRGQYIDMSLLDVQVAALANQGMNYLASGKAPQRMGNQHPSIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYL 488
P+Q FK + I G+DKQ++D+C ++ L + +++
Sbjct: 244 PYQTFKAKDKEFIIACGNDKQFKDLCIAISYPELLENDKFV 284
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 2/139 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ L + +++ RV+ R L + ++KT +EW+ + P +N
Sbjct: 268 LCIAISYPELLENDKFVRNQDRVKYRNELIPLLSEHFLQKTAKEWVERIHALKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI A+ I LV I H + + +G + S T E PP LGEHT +L
Sbjct: 328 SIEDALAEPQIVHRNLVVNIPHRLNENFQTIGSPIKLSDTPVEYHHAPPELGEHTAQILS 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+E +A LKEK I+
Sbjct: 388 RFKTAEE--LAALKEKGII 404
>gi|260555619|ref|ZP_05827839.1| formyl-CoA transferase [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|260410530|gb|EEX03828.1| formyl-CoA transferase [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|452948324|gb|EME53803.1| L-carnitine dehydrogenase [Acinetobacter baumannii MSP4-16]
Length = 409
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 131/281 (46%), Positives = 182/281 (64%), Gaps = 9/281 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ N T S
Sbjct: 4 LQEIRVLDLSRVLAGPWCGQILADLGAEVIKIERPRVGDDTRMWGPPWMPDQDGNMTRES 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF C NRNK SV VD TPEGQ +I ++AK DV++EN+ G L + L Y LSE+N
Sbjct: 64 GYFQCTNRNKYSVAVDITTPEGQALIYEIAKTADVVIENYKTGSLAKYGLDYASLSELNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
++YCS+TGFG GP + PGYD I + GL+ ITG PD G KVG+A +D+ TG
Sbjct: 124 NIVYCSITGFGQDGPRAEEPGYDFIIQGMSGLMSITGEPDDVAGGGAQKVGVAVVDIQTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AAL+ + TG+GQ ID +LL QV+ L N G NYL +G +R G H ++V
Sbjct: 184 LYSTIAIQAALIARSHTGRGQYIDMSLLDVQVAALANQGMNYLASGKAPQRMGNQHPSIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYL 488
P+Q FK + I G+DKQ++D+C + L + +++
Sbjct: 244 PYQTFKAKDKEFIIACGNDKQFKDLCIAIGYPELLENEKFV 284
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 62/139 (44%), Gaps = 2/139 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L + +++ RV+ R L + ++KT +EW+ + P +N
Sbjct: 268 LCIAIGYPELLENEKFVRNQDRVKYRNELIPLLSEHFLQKTAKEWVERIHALKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI A+ I LV I H + + +G + S T E PP LGEHT +L
Sbjct: 328 SIEDALAEPQIVHRNLVVNIPHRLNENFQTIGSPIKLSDTPVEYHHAPPELGEHTAQILS 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+E +A LKEK I+
Sbjct: 388 RFKTAEE--LAVLKEKGII 404
>gi|339485067|ref|YP_004699595.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
putida S16]
gi|338835910|gb|AEJ10715.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
putida S16]
Length = 406
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 133/294 (45%), Positives = 190/294 (64%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGA+VIKVE+P +GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWSGQILADLGADVIKVERPGSGDDTRSWGPPFLKDTQGENTGEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF EGQ+++ +LA + D+++ENF G L L Y+ L +N
Sbjct: 64 AYYLSANRNKRSVTIDFTQSEGQRLVHELAAKSDIVIENFKVGGLAAYGLDYQSLKAVNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 RLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPEGEEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ +TG GQ +D LL QV+ L N NYL G +R G +H N+V
Sbjct: 184 LYSTVAILAALAHRDQTGVGQHVDMALLDVQVACLANQAMNYLTTGNPPRRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR++T L +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDSQFRRFAEVAGQPQWADDPRFVTNKLRVANRAELI 297
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 66/139 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR++T LRV NR L I T+ KTT EW+ + P +N
Sbjct: 268 FAEVAGQPQWADDPRFVTNKLRVANRAELIPLIRQATVFKTTAEWVSQLEAAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++Q+F D + L I H G + V + S T E R PP LGEHT+ VL
Sbjct: 328 DLAQMFQDPQVLARGLAVNIPHPLAGSVPQVASPIRLSETPVEYRRAPPLLGEHTEMVLG 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
++L D + +L+ +L
Sbjct: 388 EVLGLDTAEVQRLRGAGVL 406
>gi|299771465|ref|YP_003733491.1| L-carnitine dehydrogenase [Acinetobacter oleivorans DR1]
gi|298701553|gb|ADI92118.1| L-carnitine dehydrogenase [Acinetobacter oleivorans DR1]
Length = 409
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 131/281 (46%), Positives = 182/281 (64%), Gaps = 9/281 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ N T S
Sbjct: 4 LQGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPRVGDDTRMWGPPWMPDQDGNMTRES 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF C NRNK SV VD TPEGQ +I ++AK DV++EN+ G L + L Y LSE+N
Sbjct: 64 GYFQCTNRNKYSVAVDITTPEGQALIYEIAKTADVVIENYKTGSLAKYGLDYASLSELNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
++YCS+TGFG GP + PGYD I + GL+ ITG PD G KVG+A +D+ TG
Sbjct: 124 NIVYCSITGFGQDGPRAEEPGYDFIIQGMSGLMSITGEPDDVAGGGAQKVGVAVVDIQTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AAL+ + TG+GQ ID +LL QV+ L N G NYL +G +R G H ++V
Sbjct: 184 LYSTIAIQAALIARSHTGRGQYIDMSLLDVQVAALANQGMNYLASGKAPQRMGNQHPSIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYL 488
P+Q FK + I G+DKQ++D+C + L + +++
Sbjct: 244 PYQTFKAKDKEFIIACGNDKQFKDLCIAIGYPELLENEKFM 284
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 63/139 (45%), Gaps = 2/139 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L + +++ RV+ R+ L + ++KT +EW+ + + P +N
Sbjct: 268 LCIAIGYPELLENEKFMRNQDRVKYRDELIPLLSEHFLQKTAKEWVDMIHALKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI + I LV I H + + +G + S T E PP LGEHT +L
Sbjct: 328 SIEDALVEPQIVHRNLVVNIPHRLNENFQTIGSPIKLSDTPVEYHHAPPELGEHTAQILS 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+E +A LKEK I+
Sbjct: 388 RFKTAEE--LATLKEKGII 404
>gi|410418786|ref|YP_006899235.1| hypothetical protein BN115_0990 [Bordetella bronchiseptica MO149]
gi|427820940|ref|ZP_18988003.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
gi|427823586|ref|ZP_18990648.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
gi|408446081|emb|CCJ57746.1| conserved hypothetical protein [Bordetella bronchiseptica MO149]
gi|410571940|emb|CCN20190.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
gi|410588851|emb|CCN03912.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
Length = 402
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 132/279 (47%), Positives = 177/279 (63%), Gaps = 9/279 (3%)
Query: 222 ILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE-----LSTYFTC 276
+LDLTRI+AGP+CT +LAD GA VIKVE+P GD+ R WGPP++ + STYF
Sbjct: 2 VLDLTRILAGPWCTQILADFGARVIKVERPGVGDDTRSWGPPWMPGADGEQARHSTYFAA 61
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
NRNK+SV VD T EGQ+I++ LA + DVL+ENF G L R L Y LS +N +L+YC
Sbjct: 62 ANRNKQSVSVDIATAEGQEIVRALAMRADVLIENFKVGDLARHGLDYASLSAVNPRLVYC 121
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITG----HPDGPPCKVGIASIDLATGLYAHG 392
S+TG+G GPY DRPGYD+I GGL+ +TG P G P KVG+A D+ TG+YA
Sbjct: 122 SITGYGQTGPYADRPGYDLIFQGEGGLMSVTGERDDRPGGGPQKVGVAIADIVTGMYASS 181
Query: 393 AVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVF 452
AV+AAL + TG GQ ID LL + N+ N++ G R+G +H +VP++V
Sbjct: 182 AVLAALQRRAATGAGQYIDIALLDCMAAFGANLAFNHVATGAVPPRYGNAHPTLVPYEVL 241
Query: 453 KTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
S+G+V + G+D Q++ C + LA D RY TG+
Sbjct: 242 AASDGHVIVAAGNDAQWRRFCAALGRPDLAADARYATGS 280
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 57/139 (41%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C + LA D RY TG+ R+ +R+ L EI + WL P ++N
Sbjct: 261 FCAALGRPDLAADARYATGSGRIVHRDALMPEIARTFATEPAAHWLARLTEHGIPNGRIN 320
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
QVF + + E+ + V V +S + R PALG+HT VL
Sbjct: 321 DYKQVFEHPQLLHRGMRVEMPDGAGNPVAGVANPVKFSASAVAYRHAAPALGQHTREVLC 380
Query: 121 DLLNYDETTIAKLKEKKIL 139
LL DE + L + +L
Sbjct: 381 GLLRMDEARVQALAARGVL 399
>gi|333898419|ref|YP_004472292.1| formyl-CoA transferase [Pseudomonas fulva 12-X]
gi|333113684|gb|AEF20198.1| Formyl-CoA transferase [Pseudomonas fulva 12-X]
Length = 407
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 140/294 (47%), Positives = 192/294 (65%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
LS++R+LDL+R++AGP+C LADLGAEVIKVE+P GD+ R+WGPP+L + T +
Sbjct: 5 LSHLRVLDLSRVLAGPWCGQNLADLGAEVIKVERPKVGDDTRQWGPPYLRDGEGRDTSEA 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NRNK+S+ +DF EGQ+++++LA + D+L+ENF G L L Y L IN
Sbjct: 65 AYFLAANRNKQSLTLDFTQAEGQRLVRELAAKSDILIENFKVGGLAAYGLDYASLKAINP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ +TG PDG P KVG+A D+ TG
Sbjct: 125 RLIYCSITGFGQNGPYAKRAGYDFMIQGLGGLMSLTGQPDGGEGGGPVKVGVALTDILTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA AV+AAL H+ KTG+GQ ID LL QV+ L N NYL G+ KR G +H N+V
Sbjct: 185 LYATVAVLAALAHREKTGEGQHIDMALLDVQVACLANQAMNYLTTGVSPKRLGNAHPNIV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + + G+D Q++ C+V +DPR++T +A LI
Sbjct: 245 PYQAFPTADGDLILTVGNDSQFRKFCEVAGHPEWGVDPRFVTNGQRVAHRGDLI 298
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 68/139 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V +DPR++T RV +R L I T+ +TT +W+ + + P VN
Sbjct: 269 FCEVAGHPEWGVDPRFVTNGQRVAHRGDLIPLIRQATVFRTTAQWVDLLEAAGVPCGPVN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ QVFAD + L ++ H G+ V + S + E R PP LGEHT+ VL
Sbjct: 329 DLQQVFADPQVIARGLRLDLPHPLAGNTPQVASPLRLSASPVEYRQAPPLLGEHTERVLG 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
++L D I L+ + ++
Sbjct: 389 EVLGLDTEQIQALRAQGVI 407
>gi|387814501|ref|YP_005429987.1| CoA-transferase family III [Marinobacter hydrocarbonoclasticus ATCC
49840]
gi|381339517|emb|CCG95564.1| putative CoA-transferase family III [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 413
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 141/283 (49%), Positives = 180/283 (63%), Gaps = 9/283 (3%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNT 268
S PL+ +R+LDL+R++AGP+CT +LADLGAEVIK+E+P GD+ R WGPP+L N T
Sbjct: 8 SGPLAGIRVLDLSRVMAGPWCTQILADLGAEVIKIERPGLGDDTRHWGPPWLKDKEGNPT 67
Query: 269 ELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSE 328
S Y+ NR K SV VD PEGQ++I++LA +CDVLVENF G L R LGY+ L E
Sbjct: 68 RQSAYYLSANRGKHSVTVDLGQPEGQKLIRELAAECDVLVENFKTGGLARKGLGYESLCE 127
Query: 329 INSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPC----KVGIASIDL 384
N LIYCSVTGFG GP GYD + + GL+ ITG DG P +VG+A DL
Sbjct: 128 TNPGLIYCSVTGFGHTGPMASYAGYDYLIQAQSGLMSITGAADGQPGAGPQRVGMAVADL 187
Query: 385 ATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHA 444
TG+ A A+++AL H+ KTG+GQ ID LL QVS L N NY +G R G H
Sbjct: 188 TTGMNAVIAILSALHHRTKTGEGQHIDMALLDVQVSWLANQALNYFCSGDVPGRTGEYHP 247
Query: 445 NVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
N+ P+Q F T +G V I G+D Q+Q +C+ M LA D R+
Sbjct: 248 NLAPYQPFPTKDGQVIIAVGNDGQFQRLCQAMGRPELAEDERF 290
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ M LA D R+ + RV +R L ++ T +T+ EW+ V P +
Sbjct: 275 LCQAMGRPELAEDERFSSNPQRVLHRPELVGKLCEITRTRTSREWMDSLVNVHVPCGPIQ 334
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I++VF D + ++ E+ H G + + + +S T R PP LGE TD VL
Sbjct: 335 NIAEVFEDPQVLAREMKLELEHPVVGKVPGIANPIKFSKTPQNYRKAPPLLGEDTDAVLA 394
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L + I KL+ IL
Sbjct: 395 RVLGKNAEDIQKLRSSGIL 413
>gi|346978631|gb|EGY22083.1| formyl-coenzyme A transferase [Verticillium dahliae VdLs.17]
Length = 396
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 131/280 (46%), Positives = 183/280 (65%), Gaps = 9/280 (3%)
Query: 225 LTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELST--------YFTC 276
+TR++AGP+CT +L DLGAEVIK+E P GD+ R WGPP+ E ST YF
Sbjct: 1 MTRVLAGPYCTQILGDLGAEVIKIEHPTRGDDTRAWGPPYAAYKEGSTQKGPGESAYFLA 60
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
VNRNKKS+ ++F+ P G +I+ L CD+LVEN++PG L + L Y L IN LIY
Sbjct: 61 VNRNKKSLGLNFQHPSGTKILHKLVASCDILVENYLPGTLKKYKLDYDTLRAINPALIYA 120
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S+TG+G GPY +R GYD++ + GL+HITG DGPP KVG+A DL TGLY ++MA
Sbjct: 121 SITGYGQTGPYSNRAGYDVMVEAEFGLMHITGSRDGPPVKVGVAVTDLTTGLYTSNSIMA 180
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAG-IEGKRWGTSHANVVPHQVFKTS 455
ALL + KTG+GQ ID +L Q + L N+ ++ L +G + RWGT+H ++VP++ FKT
Sbjct: 181 ALLARAKTGRGQHIDVSLSDCQTATLANIASSCLISGKKDSGRWGTAHPSIVPYRSFKTQ 240
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILA 495
+G + G G+D+ Y +C+ + L DP+Y+T A +A
Sbjct: 241 DGDILFGGGNDRLYGILCEGLGRPELKDDPKYITNAQRVA 280
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 78/139 (56%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + L DP+Y+T A RV NR L IE +M KTTEEWL +F+G PYA VN
Sbjct: 257 LCEGLGRPELKDDPKYITNAQRVANRIELEALIEGISMTKTTEEWLQVFEGKGMPYAAVN 316
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ EH + +V E+ HE G IK+V V YS ++P +R+ PP LG+HT+ VL
Sbjct: 317 DVQATMEHEHTKARNMVVEMDHEHCGTIKMVNTPVKYSESEPRIRSVPPTLGQHTEEVLT 376
Query: 121 DLLNYDETTIAKLKEKKIL 139
L I L+ + ++
Sbjct: 377 QQLGLSAEGIEALRSEGVV 395
>gi|320451468|ref|YP_004203564.1| caib/baif family protein [Thermus scotoductus SA-01]
gi|320151637|gb|ADW23015.1| caib/baif family protein [Thermus scotoductus SA-01]
Length = 400
Score = 277 bits (708), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 128/266 (48%), Positives = 179/266 (67%), Gaps = 3/266 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PLS +++LDL+R++AGP CTM+LADLGAEVIKVE P GDE R WGPPF+ S YF
Sbjct: 3 PLSGIQVLDLSRVLAGPLCTMILADLGAEVIKVEPP-WGDETRGWGPPFVKGE--SAYFL 59
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNR KKS+ +D KT EGQ++++ LA++ DVLVENF G L R L Y+ L E+N +L+Y
Sbjct: 60 SVNRGKKSLALDLKTLEGQEVVRRLAQRADVLVENFKTGDLRRYGLDYESLRELNPRLVY 119
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
S+TGFG GP PGYD G++ +TG P+GPP KVG+A ID+ TG+ AV+
Sbjct: 120 LSITGFGHTGPRAQEPGYDAALQGYTGIMSVTGEPEGPPMKVGVAWIDVMTGMMGAVAVL 179
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
+AL + K+G GQ ID +L + L N+G +YL G KR G +HA +VP+ F +
Sbjct: 180 SALYEREKSGLGQHIDLSLFDVGLFALANLGESYLLTGKPPKRLGNAHAQIVPYGAFPAA 239
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHL 481
+G++ + G+D+Q+ +C+V++L L
Sbjct: 240 DGWLVLAVGNDEQFARLCQVLDLPDL 265
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 4/140 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+V++L L R+ T A RVE R+ + + I + WL F+ P A VN
Sbjct: 256 LCQVLDLPDLLA--RFPTNAERVEARKEVVEAISQVLKTQPRGHWLERFREKGIPAAPVN 313
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDI-KIVGPAVAYSLTQPEVRTPPPALGEHTDYVL 119
+++ F D Q + + H + + P S T PPP LGEHT+ VL
Sbjct: 314 DLAEAFQDPQAQARGAIWTLPHPLLEALPTLANPLRFLSRTPASPSLPPPLLGEHTEAVL 373
Query: 120 KDLLNYDETTIAKLKEKKIL 139
++ Y +A+L EK ++
Sbjct: 374 RE-AGYTPEEVARLVEKGVV 392
>gi|407711345|ref|YP_006836118.1| CoA-transferase [Burkholderia phenoliruptrix BR3459a]
gi|407240028|gb|AFT90225.1| CoA-transferase [Burkholderia phenoliruptrix BR3459a]
Length = 406
Score = 277 bits (708), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 127/281 (45%), Positives = 180/281 (64%), Gaps = 5/281 (1%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
L+ +++LDL+RI+AGP T LL DLGA+V+KVE+P GD+ RKWGPP++ TE S
Sbjct: 9 LAGIKVLDLSRILAGPSATQLLGDLGADVVKVEKPDEGDDTRKWGPPYVRGKSGEETEES 68
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+S+ +D + G+Q++ L DVLVEN+ G L R L Y+ + +
Sbjct: 69 AYYLAANRNKRSIAIDIGSAAGRQLVHQLIAHADVLVENYKVGGLARYGLAYEQIRDRYP 128
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+L+YCSVTGFG GPY RPGYD + +GG++ +TG PDG P K G+ D+ TG+YA
Sbjct: 129 RLVYCSVTGFGQTGPYASRPGYDFLIQGMGGIMSLTGVPDGEPMKAGVGIADVMTGMYAA 188
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
++AAL H+ +TGKGQ ID +LL TQ+S L+N G NYL R G H N+VP+QV
Sbjct: 189 VGILAALQHRERTGKGQHIDISLLDTQISWLVNAGTNYLADRQLPARLGNGHPNIVPYQV 248
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
F T++ + + G+D Q+ C V + LA D R+ T ++
Sbjct: 249 FSTADAPMILAVGNDAQFGRFCDVAGINELASDERFATNSM 289
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 2/130 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C V + LA D R+ T ++R+ NR LC+ ++ + WL + V P VN
Sbjct: 269 FCDVAGINELASDERFATNSMRIRNRAALCELVDNTLRTRHRATWLQQLEAVGVPCGPVN 328
Query: 61 SISQVFADEHI--QDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
++ VFAD H+ + +L G+++++ + S T P R PPP L EH V
Sbjct: 329 NLEDVFADPHVKARGAELHMPCEWAMDGELRLLANPLRMSATPPSYRRPPPRLNEHAAEV 388
Query: 119 LKDLLNYDET 128
L D L +++
Sbjct: 389 LTDWLGTNQS 398
>gi|398851691|ref|ZP_10608371.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM80]
gi|398246143|gb|EJN31640.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM80]
Length = 406
Score = 277 bits (708), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 185/294 (62%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWAGQILADLGAEVIKVERPGNGDDTRAWGPPFLKDAYGENTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF PEGQ+++++LA + D+L+ENF G L L Y L IN
Sbjct: 64 AYYLSANRNKQSVTIDFTRPEGQKLVRELAAKSDILIENFKVGGLAAYGLDYGSLKAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 NLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPEGDEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ ++AAL H+ G GQ ID LL QV+ L N NYL G KR G +H N+V
Sbjct: 184 LYSTVGILAALAHRDHDGGGQHIDMALLDVQVACLANQAMNYLTTGNAPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ T L +A + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAEVAGQPQWADDPRFATNKLRVANRTVLI 297
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 67/139 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ T LRV NR +L I T+ KTT EW+ + P +N
Sbjct: 268 FAEVAGQPQWADDPRFATNKLRVANRTVLIPLIRQATVFKTTAEWVAELEQAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+SQVF D ++ L E+ H G + V + S T E R PP LGEHT VL+
Sbjct: 328 DLSQVFEDPQVKARGLAIELPHALAGMVPQVASPIRMSQTPVEYRRAPPLLGEHTLEVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L +A+LK +L
Sbjct: 388 GVLGLGAGAVAELKAAGVL 406
>gi|299532172|ref|ZP_07045566.1| L-carnitine dehydratase/bile acid-inducible [Comamonas testosteroni
S44]
gi|298719834|gb|EFI60797.1| L-carnitine dehydratase/bile acid-inducible [Comamonas testosteroni
S44]
Length = 415
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 134/299 (44%), Positives = 186/299 (62%), Gaps = 9/299 (3%)
Query: 212 NPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE-- 269
P+ L ++++LDL+R++AGP+ L DLGAEVIKVE+P +GD+ R WGPP++ + E
Sbjct: 7 QPAQALQHIKVLDLSRVLAGPWAAQTLGDLGAEVIKVERPGSGDDTRAWGPPYVVDPEGL 66
Query: 270 ---LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHL 326
S Y+ C NRNK+S+ VDF EGQ+I++ LA +CDVL+ENF G L + L Y L
Sbjct: 67 PTGESAYYMCTNRNKQSISVDFTRGEGQEIVRQLAARCDVLIENFKTGGLAQYGLDYTSL 126
Query: 327 SEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASI 382
S +N +L+YCSVTGFG GPY R GYD + +GGL+ I+GH P G P KVG+A
Sbjct: 127 SALNPRLVYCSVTGFGQDGPYAHRAGYDFLIQGMGGLMSISGHADGQPGGGPMKVGVALT 186
Query: 383 DLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTS 442
D+ TGLYA A++AAL + TG+GQ ID LL V+ L N NYL +R G +
Sbjct: 187 DILTGLYASTAILAALQAREHTGRGQHIDLALLDVGVACLANQSMNYLYGDQVPQRMGNA 246
Query: 443 HANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
H N VP+Q F T +G++ + G+D Q+ C+ A D R+ + A LA + L+
Sbjct: 247 HPNTVPYQEFPTEDGHMILAVGNDGQFARFCQAAGRSQWAEDQRFSSNAARLAHRAELV 305
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 66/140 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+ A D R+ + A R+ +R L + I T+ ++T W+ + + + P +N
Sbjct: 276 FCQAAGRSQWAEDQRFSSNAARLAHRAELVEMIRRVTLTRSTRAWVQLLEQHAVPCGPIN 335
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ +VF D ++ + ++H K G + +V + S T R PP LG+HT +L+
Sbjct: 336 TVREVFEDPQVRARGMQIAMTHPKAGQVPLVASPIRLSDTPVTYRHAPPQLGQHTLELLE 395
Query: 121 DLLNYDETTIAKLKEKKILG 140
L + ++ +LG
Sbjct: 396 RHLGLSTQQMQAYRDSGVLG 415
>gi|421655760|ref|ZP_16096074.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-72]
gi|424061052|ref|ZP_17798543.1| hypothetical protein W9K_02166 [Acinetobacter baumannii Ab33333]
gi|404669004|gb|EKB36913.1| hypothetical protein W9K_02166 [Acinetobacter baumannii Ab33333]
gi|408506783|gb|EKK08487.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-72]
Length = 409
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 131/281 (46%), Positives = 182/281 (64%), Gaps = 9/281 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ N T S
Sbjct: 4 LQGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPRVGDDTRMWGPPWMPDQDGNMTRES 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF C NRNK SV VD TPEGQ +I ++AK DV++EN+ G L + L Y LSE+N
Sbjct: 64 GYFQCTNRNKYSVAVDITTPEGQALIYEIAKTADVVIENYKTGSLAKYGLDYASLSELNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
++YCS+TGFG GP + PGYD I + GL+ ITG PD G KVG+A +D+ TG
Sbjct: 124 NIVYCSITGFGQDGPRAEEPGYDFIIQGMSGLMSITGEPDDVAGGGAQKVGVAVVDIQTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AAL+ + TG+GQ ID +LL QV+ L N G NYL +G +R G H ++V
Sbjct: 184 LYSTIAIQAALIARSHTGRGQYIDMSLLDVQVAALANQGMNYLASGKAPQRMGNQHPSIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYL 488
P+Q FK + I G+DKQ++D+C + L + +++
Sbjct: 244 PYQTFKAKDKEFIIACGNDKQFKDLCIAIGYPELLENEKFV 284
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 2/139 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L + +++ RV+ R L + + KT +EW+ + + P +N
Sbjct: 268 LCIAIGYPELLENEKFVRNQDRVKYRNELIPLLSEHFLRKTAKEWVDMIHALKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI A+ I LV I H + + +G + S T E R PP LGEHT +L
Sbjct: 328 SIEDALAEPQILHRNLVVNIPHRLNENFQTIGSPIKLSDTPVEYRHAPPELGEHTTQILS 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+E +A LKEK I+
Sbjct: 388 RFKTAEE--LATLKEKGII 404
>gi|239501347|ref|ZP_04660657.1| L-carnitine dehydrogenase [Acinetobacter baumannii AB900]
gi|421677140|ref|ZP_16117033.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC111]
gi|410393418|gb|EKP45771.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC111]
Length = 409
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 131/281 (46%), Positives = 182/281 (64%), Gaps = 9/281 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ N T S
Sbjct: 4 LQGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPRVGDDTRMWGPPWMPDQDGNMTRES 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF C NRNK SV VD TPEGQ +I ++AK DV++EN+ G L + L Y LSE+N
Sbjct: 64 GYFQCTNRNKYSVAVDITTPEGQALIYEIAKTADVVIENYKTGSLAKYGLDYASLSELNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
++YCS+TGFG GP + PGYD I + GL+ ITG PD G KVG+A +D+ TG
Sbjct: 124 NIVYCSITGFGQDGPRAEEPGYDFIIQGMSGLMSITGEPDDVAGGGAQKVGVAVVDIQTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AAL+ + TG+GQ ID +LL QV+ L N G NYL +G +R G H ++V
Sbjct: 184 LYSTIAIQAALIARSHTGRGQYIDMSLLDVQVAALANQGMNYLASGKAPQRMGNQHPSIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYL 488
P+Q FK + I G+DKQ++D+C + L + +++
Sbjct: 244 PYQTFKAKDKEFIIACGNDKQFKDLCIAIGYPELLENEKFV 284
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 63/139 (45%), Gaps = 2/139 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L + +++ RV+ R L + ++K+ +EW+ + + P +N
Sbjct: 268 LCIAIGYPELLENEKFVRNQDRVKYRNELIPLLSEHFLQKSAKEWVDMIHALKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI A+ I LV I H + + +G + S T E PP LGEHT +L
Sbjct: 328 SIEDALAEPQILHRNLVVNIPHRLNENFQTIGSPIKLSDTPVEYHHAPPELGEHTAQILS 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+E +A LKEK I+
Sbjct: 388 RFKTAEE--LAALKEKGII 404
>gi|46199828|ref|YP_005495.1| acyl-CoA transferase [Thermus thermophilus HB27]
gi|55981856|ref|YP_145153.1| CAIB/BAIF family protein [Thermus thermophilus HB8]
gi|46197455|gb|AAS81868.1| Predicted acyl-CoA transferases/carnitine dehydratase [Thermus
thermophilus HB27]
gi|55773269|dbj|BAD71710.1| CAIB/BAIF family protein [Thermus thermophilus HB8]
Length = 407
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 131/277 (47%), Positives = 181/277 (65%), Gaps = 5/277 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PLS +++LDL+R++AGP CTM+LADLGAEV+KVE P GDE R WGPPF+ S YF
Sbjct: 3 PLSGLKVLDLSRVLAGPLCTMILADLGAEVVKVEPP-WGDETRGWGPPFVEGE--SAYFL 59
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNR K+SV +D K PEGQ+ ++ LA++ DVLVENF G L R L Y+ L +N +LIY
Sbjct: 60 AVNRGKRSVALDLKRPEGQEAVRRLAQKADVLVENFKTGDLRRFGLDYESLKPLNPRLIY 119
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
S+TGFG GP PGYD G++ +TG P+GPP KVG+A ID+ TG+ AV+
Sbjct: 120 LSITGFGHTGPRAKEPGYDAALQGYTGIMSVTGEPEGPPMKVGVAWIDVMTGMMGALAVL 179
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
AAL + ++G GQ ID +L + L N+G ++L G KR G +HA +VP+ F
Sbjct: 180 AALWERERSGLGQHIDLSLFDVGLFALANLGESFLLTGKPPKRLGNAHAQIVPYGAFPAE 239
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
+G++ + G+D+Q+ +C+V+ L LA R+ T AL
Sbjct: 240 DGWLVLAVGNDEQFARLCQVVGLPDLAR--RFPTNAL 274
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 68/156 (43%), Gaps = 11/156 (7%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+V+ L LA R+ T ALRVE+RE + + + ++ WL F+ P A VN
Sbjct: 256 LCQVVGLPDLAR--RFPTNALRVEHREEVVEALSRALKARSRAHWLERFKEAGVPAAPVN 313
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIK-IVGPAVAYSLTQPEVRTPPPALGEHTDYVL 119
+ + F D + V + H G + + P S T PPP LGEHT VL
Sbjct: 314 DLKEAFQDPQARARGAVWTLPHPLLGALPTLANPLRFLSRTPAGPGLPPPLLGEHTREVL 373
Query: 120 KDLLNYDETTIAKLKEKKILGLIERLTKNADPVCTR 155
+ Y +A L ++ I K A P R
Sbjct: 374 LE-AGYTPEAVADLVQRGI-------AKEAPPASQR 401
>gi|342879736|gb|EGU80973.1| hypothetical protein FOXB_08532 [Fusarium oxysporum Fo5176]
Length = 514
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 134/293 (45%), Positives = 191/293 (65%), Gaps = 10/293 (3%)
Query: 209 SSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNT 268
S+ LPL +R+LD+TR++AGP+CT +L DLGAEVIK+E PV GD+ R WGPP+
Sbjct: 102 SAVKTGLPLEGIRVLDMTRVLAGPYCTQILGDLGAEVIKIEHPVRGDDTRAWGPPYAKYK 161
Query: 269 ELST--------YFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLN 320
+ S+ YF NRNKKS+ + F+ EG +++ LA +CDVLVEN++PG L + +
Sbjct: 162 DGSSAKGPGESAYFLGANRNKKSLGLSFQHKEGVEVLHKLATKCDVLVENYLPGTLKKYS 221
Query: 321 LGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIA 380
+ Y+ L +IN LIY S+TG+G GPY +R GYD++ + GL+HITG DGPP KVG+A
Sbjct: 222 MDYETLRKINPGLIYASITGYGQTGPYSNRAGYDVMVEAEFGLMHITGERDGPPVKVGVA 281
Query: 381 SIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAG-IEGKRW 439
DL TGLY +VMAALL + K+GKGQ ID L Q + L N+ ++ L +G + RW
Sbjct: 282 VTDLTTGLYTSNSVMAALLGRAKSGKGQHIDVALSDCQTATLANIASSCLVSGKKDSGRW 341
Query: 440 GTSH-ANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
GT+H A++VP++ F+T +G + G G+D+ + +C + D RY T A
Sbjct: 342 GTAHQASIVPYKSFETKDGGILFGGGNDRLFGVLCDGLGQPQWKDDARYKTNA 394
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 82/140 (58%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + D RY T A RVE+R L +IEA T KTT+EWL IF+G PYA +N
Sbjct: 375 LCDGLGQPQWKDDARYKTNADRVEHRNDLEAKIEAITKLKTTQEWLEIFEGKGMPYAAIN 434
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ EH + +V E+ H++ G +K+V + S T P +R+ PP LG+HT+ VL+
Sbjct: 435 DVQGTLNHEHTKARNMVVEMEHDECGPLKMVNTPIKLSETPPTIRSAPPMLGQHTNEVLQ 494
Query: 121 DLLNYDETTIAKLKEKKILG 140
+ L +ET I L+EK I+G
Sbjct: 495 EHLGLNETDITALREKGIVG 514
>gi|308048862|ref|YP_003912428.1| L-carnitine dehydratase/bile acid-inducible protein F [Ferrimonas
balearica DSM 9799]
gi|307631052|gb|ADN75354.1| L-carnitine dehydratase/bile acid-inducible protein F [Ferrimonas
balearica DSM 9799]
Length = 380
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/288 (45%), Positives = 182/288 (63%), Gaps = 3/288 (1%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE---LSTY 273
L +R+LDL+R++AGP+ LLADLGAEVIKVE+P GD+ R WGPPFL + S Y
Sbjct: 4 LQGIRVLDLSRVLAGPWAGQLLADLGAEVIKVERPGRGDDTRHWGPPFLEGPDGPPESAY 63
Query: 274 FTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQL 333
F C NR K+SVC+D + +GQQ + LA+QCDV++ENF G R+ L Y +LS N L
Sbjct: 64 FLCANRGKRSVCLDLASAQGQQRCRQLAQQCDVVIENFKVGDAARMGLDYPNLSADNPGL 123
Query: 334 IYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGA 393
IYCS+TGFG GPY+ RPGYD++ ++GGL+ ITG P+G P KVG+A D+ TGLYA
Sbjct: 124 IYCSITGFGQTGPYRHRPGYDLLVQAMGGLMSITGAPEGEPQKVGVALTDIMTGLYATVG 183
Query: 394 VMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFK 453
++AA+ + +G GQ ID LL + L N N L GIE R G +H ++VP+Q F
Sbjct: 184 ILAAVNERQHSGLGQHIDLALLDVTAATLANQATNALIGGIEPGRLGNAHPSIVPYQSFV 243
Query: 454 TSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
++G + + G+D Q+ +C + A D R+ T A + L+
Sbjct: 244 CADGELVLAVGNDAQFARLCAALGEPQWASDRRFATNAARVTHRDQLV 291
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + A D R+ T A RV +R+ L + + + WL + + P +N
Sbjct: 262 LCAALGEPQWASDRRFATNAARVTHRDQLVPMLTRIFLTSPRQHWLAVLELAGVPCGPIN 321
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDY 117
S+ +VFAD IQ ++V ++H ++K+ G + S T PPP LG +
Sbjct: 322 SVGEVFADPQIQARQMVVSMTHGNGAELKLPGNPIKLSRTPVRYGQPPPQLGADQAW 378
>gi|410420622|ref|YP_006901071.1| hypothetical protein BN115_2838 [Bordetella bronchiseptica MO149]
gi|427819397|ref|ZP_18986460.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
gi|408447917|emb|CCJ59594.1| conserved hypothetical protein [Bordetella bronchiseptica MO149]
gi|410570397|emb|CCN18570.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
Length = 407
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 135/282 (47%), Positives = 183/282 (64%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L ++++LDLTRI+AGP+ T LAD+GAEV+KVE+P GD+ R WGPPFL N T S
Sbjct: 5 LGHIKVLDLTRILAGPWATQTLADMGAEVVKVERPRVGDDTRAWGPPFLKDCEGNETADS 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+YF NR KKS+ VD P+GQ +I+DLA DV+VEN+ G L R L Y+ L IN
Sbjct: 65 SYFLAANRGKKSITVDLAHPDGQALIRDLAATADVVVENYKVGTLARYGLDYESLKAINP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+L+YCS+TGFG GPY PGYD + +GGL+ ITG P+G P KVGIA DL TG
Sbjct: 125 RLVYCSITGFGQDGPYASLPGYDFVFQGMGGLMSITGQPEGTPGDEPMKVGIAISDLLTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA A++AAL ++ +G GQ +D +LL VS+ N+ +G +R G +H+N+V
Sbjct: 185 MYATTAILAALERRHVSGMGQHVDMSLLDCVVSISSYQAINHFLSGKIPRRMGNAHSNMV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+QVF+ G V + G+D QY+ +CK++ LA D RY T
Sbjct: 245 PYQVFRCKEGDVIVAVGNDGQYRALCKLIERDDLATDERYAT 286
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 64/136 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK++ LA D RY T R NR+ L EI + +T +EW+ + + + P +
Sbjct: 269 LCKLIERDDLATDERYATPGQRNRNRDTLIPEIAQAMLARTMQEWVALMEAANVPCGPIY 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q+F D H+Q + + H V + S T + P LGEHTD VL
Sbjct: 329 NMQQMFEDPHVQHRGMRLSLPHSAGVQAPAVASPIRLSDTPIQYGRSAPLLGEHTDSVLA 388
Query: 121 DLLNYDETTIAKLKEK 136
+ L IA+L+ +
Sbjct: 389 ERLGLAPARIAELRAR 404
>gi|421650769|ref|ZP_16091142.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC0162]
gi|425747575|ref|ZP_18865578.1| CoA-transferase family III protein [Acinetobacter baumannii WC-348]
gi|445457657|ref|ZP_21446645.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC047]
gi|408509534|gb|EKK11205.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC0162]
gi|425493493|gb|EKU59725.1| CoA-transferase family III protein [Acinetobacter baumannii WC-348]
gi|444776274|gb|ELX00320.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC047]
Length = 409
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 131/281 (46%), Positives = 182/281 (64%), Gaps = 9/281 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ N T S
Sbjct: 4 LQGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPRVGDDTRMWGPPWMPDQDGNMTRES 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF C NRNK SV VD TPEGQ +I ++AK DV++EN+ G L + L Y LSE+N
Sbjct: 64 GYFQCTNRNKYSVAVDITTPEGQALIYEIAKTADVVIENYKTGSLAKYGLDYASLSELNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
++YCS+TGFG GP + PGYD I + GL+ ITG PD G KVG+A +D+ TG
Sbjct: 124 NIVYCSITGFGQDGPRAEEPGYDFIIQGMSGLMSITGEPDDAAGGGAQKVGVAVVDIQTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AAL+ + TG+GQ ID +LL QV+ L N G NYL +G +R G H ++V
Sbjct: 184 LYSTIAIQAALIARSHTGRGQYIDMSLLDVQVAALANQGMNYLASGKAPQRMGNQHPSIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYL 488
P+Q FK + I G+DKQ++D+C + L + +++
Sbjct: 244 PYQTFKAKDKEFIIACGNDKQFKDLCIAIGYPELLENEKFV 284
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 2/139 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L + +++ RV+ R+ L + + KT +EW+ + + P +N
Sbjct: 268 LCIAIGYPELLENEKFVRNQDRVKYRDELIPLLSEHFLRKTAKEWVEMIHVLKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI A+ I LV I H + + +G + S T E PP LGEHT +L
Sbjct: 328 SIEDALAEPQIVHRNLVVNIPHRLNENFQTIGSPIKLSDTPVEYHHAPPELGEHTAQILS 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+E +A LKEK I+
Sbjct: 388 RFKTAEE--LAALKEKGII 404
>gi|417545662|ref|ZP_12196748.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC032]
gi|421666104|ref|ZP_16106197.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC087]
gi|421670361|ref|ZP_16110359.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC099]
gi|400383550|gb|EJP42228.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC032]
gi|410385040|gb|EKP37535.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC099]
gi|410388511|gb|EKP40947.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC087]
Length = 409
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 131/281 (46%), Positives = 182/281 (64%), Gaps = 9/281 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ N T S
Sbjct: 4 LQGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPRVGDDTRMWGPPWMPDQDGNMTRES 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF C NRNK SV VD TPEGQ +I ++AK DV++EN+ G L + L Y LSE+N
Sbjct: 64 GYFQCTNRNKYSVAVDITTPEGQALIYEIAKTADVVIENYKTGSLAKYGLDYASLSELNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
++YCS+TGFG GP + PGYD I + GL+ ITG PD G KVG+A +D+ TG
Sbjct: 124 NIVYCSITGFGQDGPRAEEPGYDFIIQGMSGLMSITGEPDDVAGGGAQKVGVAVVDIQTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AAL+ + TG+GQ ID +LL QV+ L N G NYL +G +R G H ++V
Sbjct: 184 LYSTIAIQAALIARSHTGRGQYIDMSLLDVQVAALANQGMNYLASGKAPQRMGNQHPSIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYL 488
P+Q FK + I G+DKQ++D+C + L + +++
Sbjct: 244 PYQTFKAKDKEFIIACGNDKQFKDLCIAIGYPELLENDKFV 284
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 62/139 (44%), Gaps = 2/139 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L + +++ RV+ R L + ++KT +EW+ + P +N
Sbjct: 268 LCIAIGYPELLENDKFVRNQDRVKYRNELIPLLSEHFLQKTAKEWVERIHALKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI A+ I LV I H + + +G + S T E PP LGEHT +L
Sbjct: 328 SIEDALAEPQIVHRNLVVNIPHRLNENFQTIGSPIKLSDTPVEYHHAPPELGEHTAQILS 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+E +A LKEK I+
Sbjct: 388 RFKTAEE--LAALKEKGII 404
>gi|193076511|gb|ABO11163.2| L-carnitine dehydrogenase [Acinetobacter baumannii ATCC 17978]
Length = 409
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 131/281 (46%), Positives = 182/281 (64%), Gaps = 9/281 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ N T S
Sbjct: 4 LQGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPRVGDDTRMWGPPWMPDQDGNMTRES 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF C NRNK SV VD TPEGQ +I ++AK DV++EN+ G L + L Y LSE+N
Sbjct: 64 GYFQCTNRNKYSVAVDITTPEGQALIYEIAKTADVVIENYKTGSLAKYGLDYASLSELNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
++YCS+TGFG GP + PGYD I + GL+ ITG PD G KVG+A +D+ TG
Sbjct: 124 NIVYCSITGFGQDGPRAEEPGYDFIIQGMSGLMSITGEPDDVAGGGAQKVGVAVVDIQTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AAL+ + TG+GQ ID +LL QV+ L N G NYL +G +R G H ++V
Sbjct: 184 LYSTIAIQAALIARSHTGRGQYIDMSLLDVQVAALANQGMNYLASGKAPQRMGNQHPSIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYL 488
P+Q FK + I G+DKQ++D+C + L + +++
Sbjct: 244 PYQTFKAKDKEFIIACGNDKQFKDLCIAIGYPELLENEKFV 284
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 62/139 (44%), Gaps = 2/139 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L + +++ RV+ R L + + KT +EW+ + + P +N
Sbjct: 268 LCIAIGYPELLENEKFVRNQDRVKYRNELIPLLSEHFLRKTAKEWVDMIHALKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI A+ I LV I H + + +G + S T E PP LGEHT +L
Sbjct: 328 SIEDALAEPQIVYRNLVVNIPHRLNENFQTIGSPIKLSDTPVEYHHAPPELGEHTAQILS 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+E +A LKEK I+
Sbjct: 388 RFKTAEE--LAALKEKGII 404
>gi|184156984|ref|YP_001845323.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii ACICU]
gi|332875825|ref|ZP_08443619.1| III protein, CoA-transferase family [Acinetobacter baumannii
6014059]
gi|384130661|ref|YP_005513273.1| caiB [Acinetobacter baumannii 1656-2]
gi|384141943|ref|YP_005524653.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii MDR-ZJ06]
gi|385236253|ref|YP_005797592.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii TCDC-AB0715]
gi|387125102|ref|YP_006290984.1| putative acyl-CoA transferase/carnitine dehydratase [Acinetobacter
baumannii MDR-TJ]
gi|407931589|ref|YP_006847232.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii TYTH-1]
gi|416145314|ref|ZP_11600353.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii AB210]
gi|417570829|ref|ZP_12221686.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC189]
gi|417576329|ref|ZP_12227174.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-17]
gi|417870714|ref|ZP_12515668.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii ABNIH1]
gi|417872372|ref|ZP_12517277.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii ABNIH2]
gi|417876773|ref|ZP_12521525.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii ABNIH3]
gi|417883472|ref|ZP_12527713.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii ABNIH4]
gi|421204599|ref|ZP_15661719.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii AC12]
gi|421536820|ref|ZP_15983047.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii AC30]
gi|421628068|ref|ZP_16068854.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC180]
gi|421675140|ref|ZP_16115065.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC065]
gi|421687365|ref|ZP_16127092.1| CoA-transferase family III protein [Acinetobacter baumannii IS-143]
gi|421692807|ref|ZP_16132457.1| CoA-transferase family III protein [Acinetobacter baumannii IS-116]
gi|421702395|ref|ZP_16141877.1| caiB [Acinetobacter baumannii ZWS1122]
gi|421706133|ref|ZP_16145551.1| caiB [Acinetobacter baumannii ZWS1219]
gi|421792978|ref|ZP_16229116.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-2]
gi|424053585|ref|ZP_17791117.1| hypothetical protein W9G_02274 [Acinetobacter baumannii Ab11111]
gi|424062759|ref|ZP_17800244.1| hypothetical protein W9M_00042 [Acinetobacter baumannii Ab44444]
gi|425752655|ref|ZP_18870562.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-113]
gi|445468671|ref|ZP_21450884.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC338]
gi|445480515|ref|ZP_21455590.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-78]
gi|183208578|gb|ACC55976.1| predicted acyl-CoA transferases/carnitine dehydratase
[Acinetobacter baumannii ACICU]
gi|322506881|gb|ADX02335.1| caiB [Acinetobacter baumannii 1656-2]
gi|323516751|gb|ADX91132.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii TCDC-AB0715]
gi|332735952|gb|EGJ66985.1| III protein, CoA-transferase family [Acinetobacter baumannii
6014059]
gi|333366860|gb|EGK48874.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii AB210]
gi|342227172|gb|EGT92113.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii ABNIH1]
gi|342233789|gb|EGT98496.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii ABNIH2]
gi|342235752|gb|EGU00321.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii ABNIH4]
gi|342237084|gb|EGU01575.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii ABNIH3]
gi|347592436|gb|AEP05157.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii MDR-ZJ06]
gi|385879594|gb|AFI96689.1| putative acyl-CoA transferase/carnitine dehydratase [Acinetobacter
baumannii MDR-TJ]
gi|395551277|gb|EJG17286.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC189]
gi|395569550|gb|EJG30212.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-17]
gi|398325892|gb|EJN42050.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii AC12]
gi|404559452|gb|EKA64709.1| CoA-transferase family III protein [Acinetobacter baumannii IS-116]
gi|404565551|gb|EKA70717.1| CoA-transferase family III protein [Acinetobacter baumannii IS-143]
gi|404667723|gb|EKB35636.1| hypothetical protein W9G_02274 [Acinetobacter baumannii Ab11111]
gi|404675129|gb|EKB42845.1| hypothetical protein W9M_00042 [Acinetobacter baumannii Ab44444]
gi|407194137|gb|EKE65281.1| caiB [Acinetobacter baumannii ZWS1122]
gi|407194565|gb|EKE65704.1| caiB [Acinetobacter baumannii ZWS1219]
gi|407900170|gb|AFU37001.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii TYTH-1]
gi|408708589|gb|EKL53862.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC180]
gi|409985241|gb|EKO41467.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii AC30]
gi|410382687|gb|EKP35226.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC065]
gi|410398238|gb|EKP50460.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-2]
gi|425498886|gb|EKU64952.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-113]
gi|444771531|gb|ELW95660.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-78]
gi|444774906|gb|ELW98977.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC338]
Length = 409
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 131/281 (46%), Positives = 182/281 (64%), Gaps = 9/281 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ N T S
Sbjct: 4 LQGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPRVGDDTRMWGPPWMPDQDGNMTRES 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF C NRNK SV VD TPEGQ +I ++AK DV++EN+ G L + L Y LSE+N
Sbjct: 64 GYFQCTNRNKYSVAVDITTPEGQALIYEIAKTADVVIENYKTGSLAKYGLDYASLSELNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
++YCS+TGFG GP + PGYD I + GL+ ITG PD G KVG+A +D+ TG
Sbjct: 124 NIVYCSITGFGQDGPRAEEPGYDFIIQGMSGLMSITGEPDDVTGGGAQKVGVAVVDIQTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AAL+ + TG+GQ ID +LL QV+ L N G NYL +G +R G H ++V
Sbjct: 184 LYSTIAIQAALIARSHTGRGQYIDMSLLDVQVAALANQGMNYLASGKAPQRMGNQHPSIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYL 488
P+Q FK + I G+DKQ++D+C + L + +++
Sbjct: 244 PYQTFKAKDKEFIIACGNDKQFKDLCIAIGYPELLENEKFV 284
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 2/139 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L + +++ RV+ R L + + KT +EW+ + + P +N
Sbjct: 268 LCIAIGYPELLENEKFVRNQDRVKYRNELIPLLSEHFLRKTAKEWVDMIHALKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI A+ I LV I H + + +G + S T E R PP LGEHT +L
Sbjct: 328 SIEDALAEPQIVHRNLVVNIPHRLNENFQTIGSPIKLSDTPVEYRHAPPELGEHTTQILS 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+E +A LKEK I+
Sbjct: 388 RFKTAEE--LATLKEKGII 404
>gi|169634199|ref|YP_001707935.1| L-carnitine dehydrogenase [Acinetobacter baumannii SDF]
gi|332854858|ref|ZP_08435594.1| III protein, CoA-transferase family [Acinetobacter baumannii
6013150]
gi|332867822|ref|ZP_08437860.1| III protein, CoA-transferase family [Acinetobacter baumannii
6013113]
gi|169152991|emb|CAP02045.1| L-carnitine dehydrogenase [Acinetobacter baumannii]
gi|332727747|gb|EGJ59153.1| III protein, CoA-transferase family [Acinetobacter baumannii
6013150]
gi|332733722|gb|EGJ64877.1| III protein, CoA-transferase family [Acinetobacter baumannii
6013113]
Length = 409
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 131/281 (46%), Positives = 182/281 (64%), Gaps = 9/281 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ N T S
Sbjct: 4 LQGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPRVGDDTRMWGPPWMPDQDGNMTRES 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF C NRNK SV VD TPEGQ +I ++AK DV++EN+ G L + L Y LSE+N
Sbjct: 64 GYFQCTNRNKYSVAVDITTPEGQALIYEIAKTADVVIENYKTGSLAKYGLDYASLSELNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
++YCS+TGFG GP + PGYD I + GL+ ITG PD G KVG+A +D+ TG
Sbjct: 124 NIVYCSITGFGQDGPRAEEPGYDFIIQGMSGLMSITGEPDDVAGGGAQKVGVAVVDIQTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AAL+ + TG+GQ ID +LL QV+ L N G NYL +G +R G H ++V
Sbjct: 184 LYSTIAIQAALIARSHTGRGQYIDMSLLDVQVAALANQGMNYLASGKAPQRMGNQHPSIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYL 488
P+Q FK + I G+DKQ++D+C + L + +++
Sbjct: 244 PYQTFKAKDKEFIIACGNDKQFKDLCIAIGYPELLENEKFV 284
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 63/139 (45%), Gaps = 2/139 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L + +++ RV+ R L + ++K+ +EW+ + + P +N
Sbjct: 268 LCIAIGYPELLENEKFVRNQDRVKYRNELIPLLSEHFLQKSAKEWVDMIHALKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI A+ I LV I H + + +G + S T E PP LGEHT +L
Sbjct: 328 SIEDALAEPQIVHRNLVVNIPHRLNENFQTIGSPIKLSDTPVEYHHAPPELGEHTAQILS 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+E +A LKEK I+
Sbjct: 388 RFKTAEE--LAALKEKGII 404
>gi|424056815|ref|ZP_17794332.1| hypothetical protein W9I_00141 [Acinetobacter nosocomialis Ab22222]
gi|425740261|ref|ZP_18858435.1| CoA-transferase family III protein [Acinetobacter baumannii WC-487]
gi|407440348|gb|EKF46865.1| hypothetical protein W9I_00141 [Acinetobacter nosocomialis Ab22222]
gi|425495028|gb|EKU61218.1| CoA-transferase family III protein [Acinetobacter baumannii WC-487]
Length = 409
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 131/281 (46%), Positives = 182/281 (64%), Gaps = 9/281 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ N T S
Sbjct: 4 LQGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPRVGDDTRMWGPPWMPDQDGNMTRES 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF C NRNK SV VD TPEGQ +I ++AK DV++EN+ G L + L Y LSE+N
Sbjct: 64 GYFQCTNRNKYSVAVDITTPEGQALIYEIAKTADVVIENYKTGSLAKYGLDYASLSELNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
++YCS+TGFG GP + PGYD I + GL+ ITG PD G KVG+A +D+ TG
Sbjct: 124 NIVYCSITGFGQDGPRAEEPGYDFIIQGMSGLMSITGEPDDAAGGGAQKVGVAVVDIQTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AAL+ + TG+GQ ID +LL QV+ L N G NYL +G +R G H ++V
Sbjct: 184 LYSTIAIQAALIARSHTGRGQYIDMSLLDVQVAALANQGMNYLASGKAPQRMGNQHPSIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYL 488
P+Q FK + I G+DKQ++D+C + L + +++
Sbjct: 244 PYQTFKAKDKEFIIACGNDKQFKDLCIAIGYPELLENEKFV 284
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 2/139 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L + +++ RV+ R L + ++KT +EW+ + + P +N
Sbjct: 268 LCIAIGYPELLENEKFVRNQDRVKYRNELIPLLSEHFLQKTAKEWVDMIHALKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI A+ I LV I H + + +G + S T E PP L EHT +L
Sbjct: 328 SIEDALAEPQIVHRNLVVNIPHRLNENFQTIGSPIKLSDTPVEYHHAPPELCEHTAQILS 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+E +A LKEK I+
Sbjct: 388 RFKTAEE--LAALKEKGII 404
>gi|126724765|ref|ZP_01740608.1| Putative acyl-CoA transferase/carnitine dehydratase
[Rhodobacterales bacterium HTCC2150]
gi|126705929|gb|EBA05019.1| Putative acyl-CoA transferase/carnitine dehydratase
[Rhodobacteraceae bacterium HTCC2150]
Length = 385
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 135/295 (45%), Positives = 190/295 (64%), Gaps = 7/295 (2%)
Query: 212 NPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL--NNTE 269
N PL+ +++L+L RI+AGP+ LADLGA+VIKVE GD+ RKWGPPF+ + +
Sbjct: 6 NADGPLAGLKVLELARILAGPWAGQTLADLGADVIKVES-ANGDDTRKWGPPFVERDGAQ 64
Query: 270 LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEI 329
++YF NR K+S+ VDF T +GQ+ IK LA + DVL+ENF G L + L Y L+ I
Sbjct: 65 SASYFNSTNRGKRSIVVDFTTSDGQEEIKKLAAEADVLIENFKLGGLAKYGLDYVSLAAI 124
Query: 330 NSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLY 389
N +L+YCS+TGFG GPY R GYD I + GL+ ITG PDG P KVG+A D+ TGLY
Sbjct: 125 NPKLVYCSITGFGQTGPYAHRAGYDFILQGMSGLMSITGEPDGQPQKVGVAVTDIFTGLY 184
Query: 390 AHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPH 449
+ A+ AAL H+ KTG+GQ ID LL ++ N N+L G R G +H N+ P+
Sbjct: 185 SVIAIQAALAHRAKTGEGQHIDMALLDVATAVTANQAMNFLTTGTAPHRMGNAHPNLTPY 244
Query: 450 QVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILA----MTSHL 500
QVF ++G++ I TG+D QY +C++++L + D +++T A +A MT+ L
Sbjct: 245 QVFDCADGHIIIATGNDPQYGRLCELLDLVDMIEDAKFVTNASRIANRDEMTARL 299
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C++++L + D +++T A R+ NR+ + + ++TM T + L + P +N
Sbjct: 267 LCELLDLVDMIEDAKFVTNASRIANRDEMTARLTSRTMTFTKADLLAACEERGIPAGPIN 326
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEH 114
+ +VF D +Q + EI G I P V +S T + P P LGEH
Sbjct: 327 DMQEVFQDPQVQFRGMAGEIE----GVPTIRSPMV-FSKTPTQYPRPAPNLGEH 375
>gi|417554979|ref|ZP_12206048.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-81]
gi|417562154|ref|ZP_12213033.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC137]
gi|421201337|ref|ZP_15658496.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC109]
gi|421454216|ref|ZP_15903565.1| CoA-transferase family III protein [Acinetobacter baumannii IS-123]
gi|421632327|ref|ZP_16072985.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-13]
gi|421804625|ref|ZP_16240531.1| CoA-transferase family III protein [Acinetobacter baumannii
WC-A-694]
gi|395524736|gb|EJG12825.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC137]
gi|395563369|gb|EJG25022.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC109]
gi|400212983|gb|EJO43940.1| CoA-transferase family III protein [Acinetobacter baumannii IS-123]
gi|400391396|gb|EJP58443.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-81]
gi|408709639|gb|EKL54881.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-13]
gi|410410974|gb|EKP62858.1| CoA-transferase family III protein [Acinetobacter baumannii
WC-A-694]
Length = 409
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 131/281 (46%), Positives = 182/281 (64%), Gaps = 9/281 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ N T S
Sbjct: 4 LQGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPRVGDDTRMWGPPWMPDQDGNMTRES 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF C NRNK SV VD TPEGQ +I ++AK DV++EN+ G L + L Y LSE+N
Sbjct: 64 GYFQCTNRNKYSVAVDITTPEGQALIYEIAKTADVVIENYKTGSLAKYGLDYASLSELNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
++YCS+TGFG GP + PGYD I + GL+ ITG PD G KVG+A +D+ TG
Sbjct: 124 NIVYCSITGFGQDGPRAEEPGYDFIIQGMSGLMSITGEPDDVAGGGAQKVGVAVVDIQTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AAL+ + TG+GQ ID +LL QV+ L N G NYL +G +R G H ++V
Sbjct: 184 LYSTIAIQAALIARSHTGRGQYIDMSLLDVQVAALANQGMNYLASGKAPQRMGNQHPSIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYL 488
P+Q FK + I G+DKQ++D+C + L + +++
Sbjct: 244 PYQTFKAKDKEFIIACGNDKQFKDLCIAIGYPELLENEKFV 284
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 62/139 (44%), Gaps = 2/139 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L + +++ RV+ R L + + KT +EW+ + + P +N
Sbjct: 268 LCIAIGYPELLENEKFVRNQDRVKYRNELIPLLSEHFLRKTAKEWVDMIHALKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI A+ I LV I H + + +G + S T E PP LGEHT +L
Sbjct: 328 SIEDALAETQIVHRNLVVNIPHRLNENFQTIGSPIKLSDTPVEYHHAPPELGEHTAQILS 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+E +A LKEK I+
Sbjct: 388 RFKTAEE--LAALKEKGII 404
>gi|386361371|ref|YP_006059616.1| acyl-CoA transferase/carnitine dehydratase [Thermus thermophilus
JL-18]
gi|383510398|gb|AFH39830.1| putative acyl-CoA transferase/carnitine dehydratase [Thermus
thermophilus JL-18]
Length = 407
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 131/277 (47%), Positives = 181/277 (65%), Gaps = 5/277 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PLS +++LDL+R++AGP CTM+LADLGAEV+KVE P GDE R WGPPF+ S YF
Sbjct: 3 PLSGLKVLDLSRVLAGPLCTMILADLGAEVVKVEPP-WGDETRGWGPPFVEGE--SAYFL 59
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNR K+SV +D K PEGQ+ ++ LA++ DVLVENF G L R L Y+ L +N +LIY
Sbjct: 60 AVNRGKRSVALDLKRPEGQEAVRRLAQKADVLVENFKTGDLRRFGLDYESLKPLNPRLIY 119
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
S+TGFG GP PGYD G++ +TG P+GPP KVG+A ID+ TG+ AV+
Sbjct: 120 LSITGFGHTGPRAKEPGYDAALQGYTGIMSVTGEPEGPPMKVGVAWIDVMTGMMGALAVL 179
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
AAL + ++G GQ ID +L + L N+G ++L G KR G +HA +VP+ F
Sbjct: 180 AALWERERSGLGQHIDLSLFDVGLFALANLGESFLLTGKPPKRLGNAHAQIVPYGAFPAE 239
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
+G++ + G+D+Q+ +C+V+ L LA R+ T AL
Sbjct: 240 DGWLVLAVGNDEQFARLCQVVGLPDLAR--RFPTNAL 274
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 68/156 (43%), Gaps = 11/156 (7%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+V+ L LA R+ T ALRVE+RE + + + ++ WL F+ P A VN
Sbjct: 256 LCQVVGLPDLAR--RFPTNALRVEHREEVVEALSRALRARSRAHWLERFKEAGVPAAPVN 313
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIK-IVGPAVAYSLTQPEVRTPPPALGEHTDYVL 119
+ + F D + V + H G + + P S T PPP LGEHT VL
Sbjct: 314 DLKEAFQDPQARARGAVWTLPHPLLGALPTLANPLRFLSRTPAGPGLPPPLLGEHTREVL 373
Query: 120 KDLLNYDETTIAKLKEKKILGLIERLTKNADPVCTR 155
+ Y +A L ++ I K A P R
Sbjct: 374 LE-AGYTPEAVADLVQRGI-------AKEAPPASQR 401
>gi|351702089|gb|EHB05008.1| hypothetical protein GW7_09877 [Heterocephalus glaber]
Length = 305
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 139/286 (48%), Positives = 185/286 (64%), Gaps = 34/286 (11%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL V+ILDLTR++AGPF TM L DLGAEVIKVE+P GD+ R WGPPF+ TE STYF
Sbjct: 13 PLVGVKILDLTRVLAGPFATMNLGDLGAEVIKVERPGVGDDTRTWGPPFVG-TE-STYFL 70
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNKKS+ V+ K P+G +I+K+LA CDV VEN+VPGKL + LGY+ + ++ ++Y
Sbjct: 71 SVNRNKKSIAVNIKDPKGVKIVKELATVCDVFVENYVPGKLTAMGLGYEDVDKVAPHIVY 130
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TG+G GP R GYD +A++I G++HITG DG P + G+A DLATGLYA+GAVM
Sbjct: 131 CSITGYGHTGPMSQRAGYDAVASAISGMMHITGPEDGDPVRPGVAMTDLATGLYAYGAVM 190
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
A L+ + KTGKG IDCNLLS+ Q FKT
Sbjct: 191 AGLIQRCKTGKGLFIDCNLLSS--------------------------------QAFKTK 218
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
+G++ +G G+++Q+ +CK++NL L D +Y T L + LI
Sbjct: 219 DGHLVVGAGNNQQFATLCKILNLPELIDDSKYKTNHLRVQNRKELI 264
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK++NL L D +Y T LRV+NR+ L K + A+ E+ T WL +F+G PY +N
Sbjct: 235 LCKILNLPELIDDSKYKTNHLRVQNRKELIKILSARFEEEMTATWLCLFEGCGIPYGPIN 294
Query: 61 SISQVFADEHI 71
++ VFAD +
Sbjct: 295 NMKGVFADPQV 305
>gi|421625057|ref|ZP_16065913.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC098]
gi|408699482|gb|EKL44958.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC098]
Length = 409
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 131/281 (46%), Positives = 182/281 (64%), Gaps = 9/281 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ N T S
Sbjct: 4 LQGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPRVGDDTRMWGPPWMPDQDGNMTRES 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF C NRNK SV VD TPEGQ +I ++AK DV++EN+ G L + L Y LSE+N
Sbjct: 64 GYFQCTNRNKYSVAVDITTPEGQALIYEIAKTADVVIENYKTGSLAKYGLDYASLSELNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
++YCS+TGFG GP + PGYD I + GL+ ITG PD G KVG+A +D+ TG
Sbjct: 124 NIVYCSITGFGQDGPRAEEPGYDFIIQGMSGLMSITGEPDDVAGGGAQKVGVAVVDIQTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AAL+ + TG+GQ ID +LL QV+ L N G NYL +G +R G H ++V
Sbjct: 184 LYSTIAIQAALIARSHTGRGQYIDMSLLDVQVAALANQGMNYLASGKAPQRMGNQHPSIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYL 488
P+Q FK + I G+DKQ++D+C + L + +++
Sbjct: 244 PYQTFKAKDKEFIIACGNDKQFKDLCIAIGYPELLENEKFV 284
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 62/139 (44%), Gaps = 2/139 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L + +++ RV+ R L + + KT +EW+ + + P +N
Sbjct: 268 LCIAIGYPELLENEKFVRNQDRVKYRNELIPLLSEHFLRKTAKEWVDMIHALKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI A+ I LV I H + + +G + S T E PP LGEHT +L
Sbjct: 328 SIEDALAEPQIVHRNLVVNIPHSLNENFQTIGSPIKLSDTPVEYHHAPPELGEHTAQILS 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+E +A LKEK I+
Sbjct: 388 RFKTAEE--LAALKEKGII 404
>gi|421695827|ref|ZP_16135425.1| CoA-transferase family III protein [Acinetobacter baumannii WC-692]
gi|404564183|gb|EKA69370.1| CoA-transferase family III protein [Acinetobacter baumannii WC-692]
Length = 409
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 131/281 (46%), Positives = 182/281 (64%), Gaps = 9/281 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ N T S
Sbjct: 4 LQGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPRVGDDTRMWGPPWMPDQDGNMTRES 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF C NRNK SV VD TPEGQ +I ++AK DV++EN+ G L + L Y LSE+N
Sbjct: 64 GYFQCTNRNKYSVAVDITTPEGQALIYEIAKTADVVIENYKTGSLAKYGLDYASLSELNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
++YCS+TGFG GP + PGYD I + GL+ ITG PD G KVG+A +D+ TG
Sbjct: 124 NIVYCSITGFGQDGPRAEEPGYDFIIQGMSGLMSITGEPDDVAGGGAQKVGVAVVDIQTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AAL+ + TG+GQ ID +LL QV+ L N G NYL +G +R G H ++V
Sbjct: 184 LYSTIAIQAALIARSHTGRGQYIDMSLLDVQVAALANQGMNYLASGKAPQRMGNQHPSIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYL 488
P+Q FK + I G+DKQ++D+C + L + +++
Sbjct: 244 PYQTFKAKDKEFIIACGNDKQFKDLCIAIGYPELLENDKFV 284
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 2/139 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L + +++ RV+ R L + ++KT +EW+ + + P +N
Sbjct: 268 LCIAIGYPELLENDKFVRNQDRVKYRNELIPLLSEHFLQKTAKEWVDMIHALKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI A+ I LV I H + + +G + S T E PP LGEHT +L
Sbjct: 328 SIEDALAEPQIVYRNLVVNIPHRLNENFQTIGSPIKLSDTPVEYHHAPPELGEHTAQILS 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+E +A LKEK I+
Sbjct: 388 RFKTAEE--LAVLKEKGII 404
>gi|445440801|ref|ZP_21441845.1| CoA-transferase family III protein [Acinetobacter baumannii
WC-A-92]
gi|444765580|gb|ELW89871.1| CoA-transferase family III protein [Acinetobacter baumannii
WC-A-92]
Length = 409
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 131/281 (46%), Positives = 182/281 (64%), Gaps = 9/281 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ N T S
Sbjct: 4 LQGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPRVGDDTRMWGPPWMPDQDGNMTRES 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF C NRNK SV VD TPEGQ +I ++AK DV++EN+ G L + L Y LSE+N
Sbjct: 64 GYFQCTNRNKYSVAVDITTPEGQALIYEIAKTADVVIENYKTGSLAKYGLDYASLSELNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
++YCS+TGFG GP + PGYD I + GL+ ITG PD G KVG+A +D+ TG
Sbjct: 124 NIVYCSITGFGQDGPRAEEPGYDFIIQGMSGLMSITGEPDDVTGGGAQKVGVAVVDIQTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AAL+ + TG+GQ ID +LL QV+ L N G NYL +G +R G H ++V
Sbjct: 184 LYSTIAIQAALIARSHTGRGQYIDMSLLDVQVAALANQGMNYLASGKAPQRMGNQHPSIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYL 488
P+Q FK + I G+DKQ++D+C + L + +++
Sbjct: 244 PYQTFKAKDKEFIIACGNDKQFKDLCIAIGYPELLENEKFV 284
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 62/139 (44%), Gaps = 2/139 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L + +++ RV+ R L + + KT +EW+ + + P +N
Sbjct: 268 LCIAIGYPELLENEKFVRNQDRVKYRNELIPLLSEHFLRKTAKEWVDMIHALKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI A+ I LV I H + + +G + S T E PP LGEHT +L
Sbjct: 328 SIEDALAEPQILHRNLVVNIPHRLNENFQTIGSPIKLSDTPVEYHHAPPELGEHTTQILS 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+E +A LKEK I+
Sbjct: 388 RFKTAEE--LATLKEKGII 404
>gi|390567423|ref|ZP_10247761.1| hypothetical protein WQE_04062 [Burkholderia terrae BS001]
gi|389940614|gb|EIN02405.1| hypothetical protein WQE_04062 [Burkholderia terrae BS001]
Length = 412
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 127/282 (45%), Positives = 185/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
L +R+LDL+R++AGP+ + LLADLGA+V+KVE+P TGD+ R WGPP+L++ T S
Sbjct: 10 LDGLRVLDLSRVLAGPWASQLLADLGADVVKVERPGTGDDTRAWGPPWLSDEDGESTGES 69
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ C NRNK+SV +D P+GQ+++K+LA + DV+VENF G L + L Y L E+N
Sbjct: 70 AYYLCANRNKRSVTIDLSEPDGQRLVKELASKADVVVENFKVGGLSQYGLDYASLKELNP 129
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+L+YCS+TGFG GPY R GYD + +GGL+ +TG DG P KVG+A D+ TG
Sbjct: 130 RLVYCSITGFGQTGPYAARAGYDFLIQGMGGLMSLTGRADGTEGEGPLKVGVALTDITTG 189
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA A++AAL + ++G GQ ID LL Q++ L N NY+ G+ +R G +H N+V
Sbjct: 190 LYATVAILAALARRERSGIGQHIDLALLDVQIACLANQATNYIVGGVVPRRIGNAHPNIV 249
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F T++G++ I G+D Q+ +C + D R+ +
Sbjct: 250 PYQDFPTADGHMIIAVGNDSQFASLCTALGKPEWGKDERFAS 291
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 66/139 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + D R+ + RV+NR L I T+ + T +W+ + P +N
Sbjct: 274 LCTALGKPEWGKDERFASNPRRVKNRNELIAMICGITVSRATGDWIAAMEAAGVPCGPIN 333
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ QVF D +Q + E+SH + +V + S + + R PP LG+HT VL+
Sbjct: 334 NLDQVFEDPQVQSRNVRIEMSHPLAKHVALVANPIRMSESPVQYRQSPPTLGQHTGEVLQ 393
Query: 121 DLLNYDETTIAKLKEKKIL 139
D L+ I +L+ K+L
Sbjct: 394 DWLDMAAADIDELRRTKLL 412
>gi|33596626|ref|NP_884269.1| hypothetical protein BPP2010 [Bordetella parapertussis 12822]
gi|33573327|emb|CAE37310.1| conserved hypothetical protein [Bordetella parapertussis]
Length = 407
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 135/282 (47%), Positives = 183/282 (64%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L ++++LDLTRI+AGP+ T LAD+GAEV+KVE+P GD+ R WGPPFL N T S
Sbjct: 5 LGHIKVLDLTRILAGPWATQTLADMGAEVVKVERPRVGDDTRAWGPPFLKDSEGNETADS 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+YF NR KKS+ VD P+GQ +I+DLA DV+VEN+ G L R L Y+ L IN
Sbjct: 65 SYFLAANRGKKSITVDLAHPDGQALIRDLAATADVVVENYKVGTLARYGLDYESLKAINP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+L+YCS+TGFG GPY PGYD + +GGL+ ITG P+G P KVGIA DL TG
Sbjct: 125 RLVYCSITGFGQDGPYASLPGYDFVFQGMGGLMSITGQPEGTPGDEPMKVGIAISDLLTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA A++AAL ++ +G GQ +D +LL VS+ N+ +G +R G +H+N+V
Sbjct: 185 MYATTAILAALERRHVSGTGQHVDMSLLDCVVSISSYQAINHFLSGKIPRRMGNAHSNMV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+QVF+ G V + G+D QY+ +CK++ LA D RY T
Sbjct: 245 PYQVFRCKEGDVIVAVGNDGQYRALCKLIERDDLATDERYAT 286
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 61/136 (44%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK++ LA D RY T R N + L EI + +T +EW + + + P +
Sbjct: 269 LCKLIERDDLATDERYATPGQRNRNCDTLIPEIAQAMLARTMQEWGALMEAANVPCGPIY 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q+F D H+Q + + H V + S T + P LGEHTD VL
Sbjct: 329 NMQQMFEDPHVQHRGMRLSLPHSAGVQAPAVASPIRLSDTPIQYGRSAPLLGEHTDSVLA 388
Query: 121 DLLNYDETTIAKLKEK 136
L IA+L+ +
Sbjct: 389 QWLGLAPARIAELRAR 404
>gi|169797088|ref|YP_001714881.1| L-carnitine dehydrogenase [Acinetobacter baumannii AYE]
gi|213156505|ref|YP_002318166.1| L-carnitine dehydrogenase [Acinetobacter baumannii AB0057]
gi|215484551|ref|YP_002326786.1| CoA-transferase family III family protein [Acinetobacter baumannii
AB307-0294]
gi|301346696|ref|ZP_07227437.1| CoA-transferase family III family protein [Acinetobacter baumannii
AB056]
gi|301510077|ref|ZP_07235314.1| CoA-transferase family III family protein [Acinetobacter baumannii
AB058]
gi|417571771|ref|ZP_12222625.1| CoA-transferase family III protein [Acinetobacter baumannii Canada
BC-5]
gi|421621976|ref|ZP_16062887.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC074]
gi|421642500|ref|ZP_16083016.1| CoA-transferase family III protein [Acinetobacter baumannii IS-235]
gi|421649070|ref|ZP_16089466.1| CoA-transferase family III protein [Acinetobacter baumannii IS-251]
gi|421659018|ref|ZP_16099244.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-83]
gi|421699147|ref|ZP_16138682.1| CoA-transferase family III protein [Acinetobacter baumannii IS-58]
gi|421795186|ref|ZP_16231270.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-21]
gi|421798859|ref|ZP_16234867.1| CoA-transferase family III protein [Acinetobacter baumannii Canada
BC1]
gi|169150015|emb|CAM87909.1| L-carnitine dehydrogenase [Acinetobacter baumannii AYE]
gi|213055665|gb|ACJ40567.1| L-carnitine dehydrogenase [Acinetobacter baumannii AB0057]
gi|213986094|gb|ACJ56393.1| CoA-transferase family III family protein [Acinetobacter baumannii
AB307-0294]
gi|400207339|gb|EJO38309.1| CoA-transferase family III protein [Acinetobacter baumannii Canada
BC-5]
gi|404571774|gb|EKA76823.1| CoA-transferase family III protein [Acinetobacter baumannii IS-58]
gi|408513227|gb|EKK14861.1| CoA-transferase family III protein [Acinetobacter baumannii IS-235]
gi|408514319|gb|EKK15926.1| CoA-transferase family III protein [Acinetobacter baumannii IS-251]
gi|408696739|gb|EKL42268.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC074]
gi|408708957|gb|EKL54219.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-83]
gi|410402073|gb|EKP54202.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-21]
gi|410411070|gb|EKP62950.1| CoA-transferase family III protein [Acinetobacter baumannii Canada
BC1]
Length = 409
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 131/281 (46%), Positives = 182/281 (64%), Gaps = 9/281 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ N T S
Sbjct: 4 LQGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPRVGDDTRMWGPPWMPDHNGNMTRES 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF C NRNK SV VD TPEGQ +I ++AK DV++EN+ G L + L Y LSE+N
Sbjct: 64 GYFQCTNRNKYSVAVDITTPEGQALIYEIAKTADVVIENYKTGSLAKYGLDYASLSELNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
++YCS+TGFG GP + PGYD I + GL+ ITG PD G KVG+A +D+ TG
Sbjct: 124 NIVYCSITGFGQDGPRAEEPGYDFIIQGMSGLMSITGEPDDVAGGGAQKVGVAVVDIQTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AAL+ + TG+GQ ID +LL QV+ L N G NYL +G +R G H ++V
Sbjct: 184 LYSTIAIQAALIARSHTGRGQYIDMSLLDVQVAALANQGMNYLASGKAPQRMGNQHPSIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYL 488
P+Q FK + I G+DKQ++D+C + L + +++
Sbjct: 244 PYQTFKAKDKEFIIACGNDKQFKDLCIAIGYPELLENEKFV 284
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 63/139 (45%), Gaps = 2/139 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L + +++ RV+ R L + ++K+ +EW+ + + P +N
Sbjct: 268 LCIAIGYPELLENEKFVRNQDRVKYRNELIPLLSEHFLQKSAKEWVDMIHALKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI A+ I LV I H + + +G + S T E PP LGEHT +L
Sbjct: 328 SIEDALAEPQIVHRNLVVNIPHRLNENFQTIGSPIKLSDTPVEYHHAPPELGEHTAQILS 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+E +A LKEK I+
Sbjct: 388 RFKTAEE--LAALKEKGII 404
>gi|421787684|ref|ZP_16224023.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-82]
gi|410406229|gb|EKP58242.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-82]
Length = 409
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 131/281 (46%), Positives = 182/281 (64%), Gaps = 9/281 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ N T S
Sbjct: 4 LQGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPRVGDDTRMWGPPWMPDQDGNMTRES 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF C NRNK SV VD TPEGQ +I ++AK DV++EN+ G L + L Y LSE+N
Sbjct: 64 GYFQCTNRNKYSVAVDITTPEGQALIYEIAKTADVVIENYKTGSLAKYGLDYASLSELNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
++YCS+TGFG GP + PGYD I + GL+ ITG PD G KVG+A +D+ TG
Sbjct: 124 NIVYCSITGFGQDGPRAEEPGYDFIIQGMSGLMSITGEPDDVVGGGAQKVGVAVVDIQTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AAL+ + TG+GQ ID +LL QV+ L N G NYL +G +R G H ++V
Sbjct: 184 LYSTIAIQAALIARSHTGRGQYIDMSLLDVQVAALANQGMNYLASGKAPQRMGNQHPSIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYL 488
P+Q FK + I G+DKQ++D+C + L + +++
Sbjct: 244 PYQTFKAKDKEFIIACGNDKQFKDLCIAIGYPELLENEKFV 284
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 2/139 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L + +++ RV+ R L + + KT +EW+ + + P +N
Sbjct: 268 LCIAIGYPELLENEKFVRNQDRVKYRNELIPLLSEHFLRKTAKEWVDMIHALKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI + I LV I H + + +G + S T E PP LGEHT +L
Sbjct: 328 SIEDALVEPQIVHRNLVVNIPHRLNENFQTIGSPIKLSDTPVEYHHAPPELGEHTAQILS 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+E +A LKEK I+
Sbjct: 388 RFKTAEE--LAALKEKGII 404
>gi|334344642|ref|YP_004553194.1| formyl-CoA transferase [Sphingobium chlorophenolicum L-1]
gi|334101264|gb|AEG48688.1| Formyl-CoA transferase [Sphingobium chlorophenolicum L-1]
Length = 417
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 125/281 (44%), Positives = 179/281 (63%), Gaps = 6/281 (2%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE------L 270
L V++LDL+R++AGP+ T +LAD GA+VIK+E P GD+ R WGPP+L +
Sbjct: 6 LEGVKVLDLSRVLAGPWSTQILADFGADVIKIELPGHGDDTRAWGPPYLTGADGEPEIGT 65
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
S Y+ NRNK+S ++ TP+G +I+ LA + D+LVENF G L + L Y+ L +N
Sbjct: 66 SAYYLSCNRNKRSAAINLATPQGADLIRKLAAEADILVENFKVGGLKKYGLDYESLRGVN 125
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYA 390
+L+YCS+TGFG GPY DR GYD +A +GG + ITG DG P + G+A DL+TG++A
Sbjct: 126 PRLVYCSITGFGQTGPYADRGGYDFVAQGMGGFMSITGEEDGGPLRAGVAMADLSTGMFA 185
Query: 391 HGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQ 450
++M AL H +TG+GQ+ID +LL TQ++ML N G N+L R G H VVP++
Sbjct: 186 TVSIMVALRHAERTGEGQQIDVSLLDTQIAMLANQGMNWLVGKEVPGRLGNRHPTVVPYK 245
Query: 451 VFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
F ++G + I G+D+Q++ C M L DPR+ T A
Sbjct: 246 TFDVADGMMIIAIGNDRQFRAFCTEMGHPELGTDPRFATSA 286
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKT----TEEWLLIFQGVSFPY 56
C M L DPR+ T A R+ NRE EIEAK E +E + F P
Sbjct: 267 FCTEMGHPELGTDPRFATSAQRLINRE----EIEAKVQEIVRPFPRDELMARFVATGVPA 322
Query: 57 AQVNSISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAY----SLTQPEVRTPPPALG 112
VN+I VF D ++ + V E+ G ++I P VAY S T + R PP +G
Sbjct: 323 GPVNTIEDVFEDPFVEARQTVHRFRREEDG-VEI--PTVAYPGKLSATPADYRYCPPRVG 379
Query: 113 EHTDYVL 119
EH+ +L
Sbjct: 380 EHSREIL 386
>gi|148657958|ref|YP_001278163.1| formyl-CoA transferase [Roseiflexus sp. RS-1]
gi|148570068|gb|ABQ92213.1| Formyl-CoA transferase [Roseiflexus sp. RS-1]
Length = 396
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 131/286 (45%), Positives = 183/286 (63%), Gaps = 2/286 (0%)
Query: 215 LPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYF 274
LPL +R+LDL+R +AGPFC+M+L DLGA+VIKVEQP GD R WGPPF STYF
Sbjct: 3 LPLEGLRVLDLSRALAGPFCSMMLGDLGADVIKVEQPGIGDHTRAWGPPFEGGE--STYF 60
Query: 275 TCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLI 334
VNRNK+S+ +DF+ G +++ L DVL+ENFVPG LDR GY I L+
Sbjct: 61 LSVNRNKRSLALDFRDERGAAVLRRLIASSDVLLENFVPGTLDRRGFGYDACRAIRPDLV 120
Query: 335 YCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAV 394
YCS++GFG GP ++R YD IA +GGL+ + G P GPP +VGIA D+ G++A A+
Sbjct: 121 YCSISGFGQVGPDRERAAYDQIAQGLGGLMSLIGEPGGPPMRVGIAITDIMAGMFAAYAI 180
Query: 395 MAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKT 454
+AAL H+ +TG+GQ++D +LL Q++ML NY G +R G H ++VP+ V++
Sbjct: 181 LAALYHRARTGEGQRVDTSLLEGQLAMLTYQAGNYFATGRAPERPGNQHPSIVPYGVYRA 240
Query: 455 SNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHL 500
++GY T+G G+D + C ++L L PR+ T LA + L
Sbjct: 241 ADGYFTLGVGTDDLWLRFCDALDLADLRDHPRFRTNVARLAHRAEL 286
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 1/139 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C ++L L PR+ T R+ +R L +E + P V+
Sbjct: 258 FCDALDLADLRDHPRFRTNVARLAHRAELNALLEPVFASLRVADIEQRLNAAGVPCGAVH 317
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVF D +Q + V I H G I++V P +S T P +R PPP LG+HTD +L
Sbjct: 318 DLAQVFTDPQVQALGSVVTIEHPTAGAIRVVAPPYHFSATPPAIRRPPPLLGQHTDEILA 377
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ + Y++ IA L+ ++
Sbjct: 378 E-IGYEQHEIATLRSIGVV 395
>gi|421663800|ref|ZP_16103944.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC110]
gi|408713139|gb|EKL58314.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC110]
Length = 409
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 131/281 (46%), Positives = 182/281 (64%), Gaps = 9/281 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ N T S
Sbjct: 4 LQGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPRVGDDTRMWGPPWMPDQDGNMTRES 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF C NRNK SV VD TPEGQ +I ++AK DV++EN+ G L + L Y LSE+N
Sbjct: 64 GYFQCTNRNKYSVAVDITTPEGQALIYEIAKTADVVIENYKTGSLAKYGLDYASLSELNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
++YCS+TGFG GP + PGYD I + GL+ ITG PD G KVG+A +D+ TG
Sbjct: 124 NIVYCSITGFGQDGPRAEEPGYDFIIQGMSGLMSITGEPDDVAGGGAQKVGVAVVDIQTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AAL+ + TG+GQ ID +LL QV+ L N G NYL +G +R G H ++V
Sbjct: 184 LYSTIAIQAALIARSHTGRGQYIDMSLLDVQVAALANQGMNYLASGKAPQRMGNQHPSIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYL 488
P+Q FK + I G+DKQ++D+C + L + +++
Sbjct: 244 PYQTFKAKDKEFIIACGNDKQFKDLCIAIGYPELLENDKFV 284
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 2/139 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L + +++ RV+ R L + ++KT +EW+ + + P +N
Sbjct: 268 LCIAIGYPELLENDKFVRNQDRVKYRNELIPLLSEHFLQKTAKEWVDMIHALKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI A+ I LV I H + + +G + S T E PP LGEHT +L
Sbjct: 328 SIEDALAEPQIVHRNLVVNIPHRLNENFQTIGSPIKLSDTPVEYHHAPPELGEHTAQILS 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+E +A LKEK I+
Sbjct: 388 RFKTAEE--LAALKEKGII 404
>gi|110634386|ref|YP_674594.1| L-carnitine dehydratase/bile acid-inducible protein F
[Chelativorans sp. BNC1]
gi|110285370|gb|ABG63429.1| L-carnitine dehydratase/bile acid-inducible protein F
[Chelativorans sp. BNC1]
Length = 390
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 134/289 (46%), Positives = 181/289 (62%), Gaps = 4/289 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE----LS 271
PLSN+R+++L RI+AGP+ LLADLGAEVIKVE P GD+ RKWGPPF+ + +
Sbjct: 5 PLSNIRVIELARILAGPWAGQLLADLGAEVIKVENPDGGDDTRKWGPPFVTGKDGENLSA 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NR K+S+ +DF E + ++ L DVL+ENF G L + L Y+ L IN
Sbjct: 65 AYFHSCNRGKRSIALDFTREEDRAVLLKLIASADVLIENFKLGGLKKYGLDYESLKAINP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+L+YCS+TGFG GPY R GYD I + GL+ ITG DG P KVG+A D+ TGLY+
Sbjct: 125 RLVYCSITGFGQDGPYAPRAGYDFIIQGMSGLMSITGPADGEPQKVGVAVTDIFTGLYSV 184
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A+ AAL H KTG+GQ ID L TQVS+L N NYL +GI R G +H N+ P++V
Sbjct: 185 IAIQAALRHAEKTGEGQHIDMALFDTQVSVLANQNLNYLVSGIAPVRMGNAHPNISPYEV 244
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHL 500
F+ +G+ + G+D Q++ C V+ + LA +P + T A +A L
Sbjct: 245 FEVVDGHFILAVGNDGQFERFCAVIGREELAANPEFSTNAARVANRERL 293
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 55/122 (45%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C V+ + LA +P + T A RV NRE L EI + + L + P + +N
Sbjct: 265 FCAVIGREELAANPEFSTNAARVANRERLRSEIALRLKTFARDLLLKSLEEAGVPASPIN 324
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I+ +FAD + ++ + V + S T P P LGEHT+ +L+
Sbjct: 325 TIADMFADPQTIARGMRLDLKDADGNALPSVRAPMVMSQTPLAYTRPSPRLGEHTEEILR 384
Query: 121 DL 122
+L
Sbjct: 385 EL 386
>gi|427821912|ref|ZP_18988974.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
gi|410587177|emb|CCN02210.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
Length = 407
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 135/282 (47%), Positives = 183/282 (64%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L ++++LDLTRI+AGP+ T LAD+GAEV+KVE+P GD+ R WGPPFL N T S
Sbjct: 5 LGHIKVLDLTRILAGPWATQTLADMGAEVVKVERPRVGDDTRAWGPPFLKDCEGNETADS 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+YF NR KKS+ VD P+GQ +I+DLA DV+VEN+ G L R L Y+ L IN
Sbjct: 65 SYFLAANRGKKSITVDLAHPDGQALIRDLAATADVVVENYKVGTLARYGLDYESLKAINP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+L+YCS+TGFG GPY PGYD + +GGL+ ITG P+G P KVGIA DL TG
Sbjct: 125 RLVYCSITGFGQDGPYASLPGYDFVFQGMGGLMSITGQPEGTPGDEPMKVGIAISDLLTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA A++AAL ++ +G GQ +D +LL VS+ N+ +G +R G +H+N+V
Sbjct: 185 MYATTAILAALERRHVSGMGQHVDMSLLDCVVSISSYQAINHFLSGKIPRRMGNAHSNMV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+QVF+ G V + G+D QY+ +CK++ LA D RY T
Sbjct: 245 PYQVFRCKEGDVIVAVGNDGQYRALCKLIERDDLATDERYAT 286
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 63/136 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK++ LA D RY T R NR+ L EI + +T +EW+ + + + P +
Sbjct: 269 LCKLIERDDLATDERYATPGQRNRNRDTLIPEIAQAMLARTMQEWVALMEAANVPCGPIY 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q+F D H+Q + + H V + S T + P LGEHTD VL
Sbjct: 329 NMQQMFEDPHVQHRGMRLSLPHSAGVQAPAVASPIRLSDTPIQYGCSAPLLGEHTDSVLA 388
Query: 121 DLLNYDETTIAKLKEK 136
L IA+L+ +
Sbjct: 389 QRLGLAPARIAELRAR 404
>gi|261323510|ref|ZP_05962707.1| L-carnitine dehydrogenase [Brucella neotomae 5K33]
gi|261299490|gb|EEY02987.1| L-carnitine dehydrogenase [Brucella neotomae 5K33]
Length = 413
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 134/280 (47%), Positives = 180/280 (64%), Gaps = 9/280 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ R+LD++R++AGP+C +LADLGAEVIK+E+P TGD+ R WGPP++ N T
Sbjct: 4 LTGYRVLDMSRVLAGPWCGQILADLGAEVIKIERPRTGDDTRDWGPPWMKDEQGNPTREV 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+Y+ NR K SV ++ +PEGQ +++ + +CDVL+EN+ G L + L Y+ LS IN
Sbjct: 64 SYYQSANRGKFSVALNIASPEGQDLLRKMVAECDVLIENYKAGSLAKYGLDYETLSAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCSVTGFG GP PGYD I I GL+ ITG P G P KVG+A DL TG
Sbjct: 124 GLVYCSVTGFGQTGPRAPEPGYDFIIQGISGLMSITGERDDKPGGGPQKVGVAVADLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL + KTGKGQ ID LL QV+ L N NYL +G R+G +HAN+V
Sbjct: 184 LYSAIAIEAALLSRAKTGKGQDIDMALLDVQVAALCNQSQNYLASGRPPGRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
P+QVF+ S+ I G+D Q+ +C + L L DPR+
Sbjct: 244 PYQVFRASDRDFIIACGNDAQFVSLCDAIGLPDLPKDPRF 283
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L L DPR+ + RV +R+ + + A + T +EW+ P +N
Sbjct: 268 LCDAIGLPDLPKDPRFTRNSDRVIHRDEIIGILAAHFLTGTADEWIGRIHPRGVPVGAIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I++ + ++ ++ +I H D VG + S T E + P LGEHTD +L+
Sbjct: 328 DIARALDEPQVKARNMLVQIPHPLNKDFVTVGSPIKLSGTPVEYKRAAPMLGEHTDTLLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
L D+ + LK + I+
Sbjct: 388 QLAKLDDDRLNDLKSRGII 406
>gi|262281484|ref|ZP_06059264.1| L-carnitine dehydrogenase [Acinetobacter calcoaceticus RUH2202]
gi|262257072|gb|EEY75810.1| L-carnitine dehydrogenase [Acinetobacter calcoaceticus RUH2202]
Length = 409
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 131/281 (46%), Positives = 182/281 (64%), Gaps = 9/281 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ N T S
Sbjct: 4 LQGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPRVGDDTRMWGPPWMPDQDGNMTRES 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF C NRNK SV VD TPEGQ +I ++AK DV++EN+ G L + L Y L+E+N
Sbjct: 64 GYFQCTNRNKYSVAVDITTPEGQALIYEIAKTADVVIENYKTGSLAKYGLDYASLNELNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
L+YCS+TGFG GP + PGYD I + GL+ ITG PD G KVG+A +D+ TG
Sbjct: 124 NLVYCSITGFGQDGPRAEEPGYDFIIQGMSGLMSITGEPDDVAGGGAQKVGVAVVDIQTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AAL+ + TG+GQ ID +LL QV+ L N G NYL +G +R G H ++V
Sbjct: 184 LYSTIAIQAALIARSHTGRGQYIDMSLLDVQVAALANQGMNYLASGKAPQRMGNQHPSIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYL 488
P+Q FK + I G+DKQ++D+C + L + +++
Sbjct: 244 PYQTFKAKDKEFIIACGNDKQFKDLCIAIGYPELLENEKFV 284
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 2/139 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L + +++ RV+ R+ L + ++KT +EW+ + + P +N
Sbjct: 268 LCIAIGYPELLENEKFVRNQDRVKYRDELIPLLSEHFLQKTAKEWVEMIHALKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI A+ I LV I H + + +G + S T E PP LGEHT +L
Sbjct: 328 SIEDALAEPQIVHRNLVVNIPHHLNENFQTIGSPIKLSDTPVEYHHAPPELGEHTAKILS 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
E +A LKEK I+
Sbjct: 388 RFKTVQE--LAALKEKGII 404
>gi|410459512|ref|ZP_11313262.1| L-carnitine dehydratase/bile acid-inducible protein F [Bacillus
azotoformans LMG 9581]
gi|409930248|gb|EKN67251.1| L-carnitine dehydratase/bile acid-inducible protein F [Bacillus
azotoformans LMG 9581]
Length = 395
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 123/275 (44%), Positives = 188/275 (68%), Gaps = 2/275 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L VR+LDLTR++AGP+CTM+L DLGAE+IKVE P D+ R WGPP+ TE S Y+ C
Sbjct: 5 LEGVRVLDLTRVLAGPYCTMILGDLGAEIIKVEGPGGSDDTRYWGPPY-KGTE-SAYYLC 62
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
NRNK+++ ++ KT +G++++K L + D+++ENF G +++ LGY L E+N ++I+C
Sbjct: 63 ANRNKRAITLNLKTEQGREVLKKLLIESDIVIENFKSGTMEKWGLGYSELKELNPRIIHC 122
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S+TGFG GPY+ PGYD I ++ GL+ ITG P KVG+A DL TGLYA+ ++A
Sbjct: 123 SITGFGHNGPYRQLPGYDFIIQAMSGLMSITGSEQSGPVKVGVAISDLFTGLYANIGILA 182
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
AL + ++G+GQ ID +L +Q+S L N+ +NYL +G G +H N+VP+Q F T +
Sbjct: 183 ALNERNQSGEGQSIDISLFDSQLSALANIASNYLISGKIPGLLGNNHPNIVPYQPFDTKD 242
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
G + + G+D Q++ +C V+ ++ + +D RY T +
Sbjct: 243 GKMVVAVGNDGQFRKLCSVLGIEDIGVDERYATNS 277
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 78/139 (56%), Gaps = 1/139 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C V+ ++ + +D RY T + R+ENR+ L + + + KT++EWL+ P +
Sbjct: 258 LCSVLGIEDIGVDERYATNSKRLENRDELTEILSLQFKVKTSKEWLIHLNESGIPAGPIQ 317
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ +VF D + +V E++H G+IK+VG + S T +VR+ PP GEH+ VL
Sbjct: 318 NMKEVFEDPQVAARNMVYEMNHPTIGEIKLVGSPLKLSRTPVQVRSHPPVAGEHSKEVLL 377
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ + Y I ++KE I+
Sbjct: 378 E-IGYTNEMIEEMKELNII 395
>gi|300704798|ref|YP_003746401.1| formyl-CoA transferase, caib/baif family [Ralstonia solanacearum
CFBP2957]
gi|299072462|emb|CBJ43812.1| putative Formyl-CoA transferase, CaiB/BaiF family [Ralstonia
solanacearum CFBP2957]
Length = 406
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 132/282 (46%), Positives = 185/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDLTR++AGP+C LAD GA+VIKVE+P GD+ R WGPP+L N+T +
Sbjct: 4 LSHLRVLDLTRVLAGPWCAQNLADFGADVIKVERPGAGDDTRAWGPPWLKDTAGNDTAEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+S+ +D TPEGQ I++ LA DV++EN+ G+L + L Y+ L +
Sbjct: 64 AYYLAANRNKRSITLDISTPEGQDIVRRLAAHSDVVLENYKVGQLKKYGLDYEALKAVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCS+TGFG GPY R GYD I +GG + +TG P G P K G+A DL TG
Sbjct: 124 DLVYCSITGFGQTGPYAARAGYDFIVQGMGGFMSLTGERDDLPGGGPQKAGVAISDLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA AV+AAL H+ +TG+GQ ID LL QV+ML N+ NYL + +RWG +H N+V
Sbjct: 184 MYATVAVLAALAHRDRTGEGQYIDMALLDVQVAMLANMNTNYLASSQAPRRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+T++G++ + G+D Q++ L LA DPR+ T
Sbjct: 244 PYQTFQTADGWIIVAVGNDGQFRRFVDAGGLPELADDPRFAT 285
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 68/134 (50%)
Query: 6 NLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQV 65
L LA DPR+ T RV NR++L + EW+ + P +N++ +V
Sbjct: 273 GLPELADDPRFATNPQRVANRDVLVPILADMVRHLGKAEWIERLEAAGVPCGPINTLDEV 332
Query: 66 FADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNY 125
F +E ++ L ++ H G + +VG V S T P PP LGEHT+ VL+D+L+
Sbjct: 333 FDNEQVKARGLRVDLPHPSAGTVPLVGSPVRMSATPPRAVAHPPLLGEHTEAVLRDVLDL 392
Query: 126 DETTIAKLKEKKIL 139
+T I L+ + ++
Sbjct: 393 PQTQIDALRAQGVI 406
>gi|344173990|emb|CCA89181.1| putative Formyl-CoA transferase, CaiB/BaiF family [Ralstonia
syzygii R24]
Length = 406
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/282 (47%), Positives = 186/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDLTR++AGP+C LAD GA+VIKVE+P GD+ R WGPP+L N+T +
Sbjct: 4 LSHLRVLDLTRVLAGPWCAQNLADFGADVIKVERPGAGDDTRTWGPPWLKDAAGNDTAEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+S+ VD TPEGQ+I++ LA + DV++EN+ G+L + L Y L +
Sbjct: 64 AYYLAANRNKRSITVDISTPEGQEIVRRLAARSDVVLENYKVGQLKKYGLDYDALKAVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCS+TGFG GPY R GYD I +GG + +TG P G P K G+A DL TG
Sbjct: 124 DLVYCSITGFGQTGPYAARAGYDFIVQGMGGFMSLTGERDELPGGGPQKAGVAISDLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA AV+AAL H+ +TG+GQ ID LL QV+ML N+ NYL +G RWG +H N+V
Sbjct: 184 MYATVAVLAALAHRDRTGEGQYIDMALLDVQVAMLANMNTNYLASGQAPGRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+T++G++ + G+D Q++ + LA DPR+ T
Sbjct: 244 PYQTFQTADGWIIVAVGNDGQFRRFVEAGGSPGLADDPRFAT 285
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 64/130 (49%)
Query: 10 LALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADE 69
LA DPR+ T RV +R++L + EW+ + P +N++ +VF +
Sbjct: 277 LADDPRFATNPQRVAHRDVLVPILAGMVRRFGKAEWIGRLEAAGVPCGPINTLDEVFDNA 336
Query: 70 HIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETT 129
++ L ++ H G + +VG V S T P PP LGEHT+ VL+D+L+
Sbjct: 337 QVKARGLRIDLPHPSAGTVPLVGSPVRMSATPPRAVAHPPLLGEHTEAVLRDVLDLPPAQ 396
Query: 130 IAKLKEKKIL 139
+ L+ + I+
Sbjct: 397 VEALRAQGII 406
>gi|167527287|ref|XP_001747976.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773725|gb|EDQ87363.1| predicted protein [Monosiga brevicollis MX1]
Length = 597
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 130/283 (45%), Positives = 184/283 (65%), Gaps = 2/283 (0%)
Query: 219 NVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTCVN 278
NV L I+AGP T LL GA++IK+E P GDE R+WGPPFL N S YFT VN
Sbjct: 217 NVVASLLAMILAGPLATQLLGAYGADIIKIEPPA-GDETRRWGPPFLPNGTAS-YFTAVN 274
Query: 279 RNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSV 338
NK+S+ +D K ++ ++ + DVL+ NF P +L + Y L +NS+LIYC +
Sbjct: 275 SNKRSLTLDLKQEREREALRKMVASSDVLLHNFTPATAKKLGVDYDTLGALNSRLIYCEL 334
Query: 339 TGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAAL 398
TG+GS GP +RPGYD+IAAS+ GL+HITG PDGPP K G+A D+ TGLY HGA++AAL
Sbjct: 335 TGYGSSGPLANRPGYDLIAASLSGLMHITGEPDGPPAKTGVAITDVVTGLYTHGAILAAL 394
Query: 399 LHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNGY 458
+ +G GQKI+ +LL Q+S++ N G N L A G+R G++H ++VP+Q F G+
Sbjct: 395 YEREHSGLGQKIETSLLEAQLSVMANTGVNALQAQQPGRRHGSAHPSIVPYQSFPAKQGH 454
Query: 459 VTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
++I S++Q+Q +C+++ HLA D R+ + AL + LI
Sbjct: 455 ISIAATSERQFQHLCQLLQCDHLAQDERFASNALRVQHRDALI 497
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 65/124 (52%), Gaps = 2/124 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIF-QG-VSFPYAQ 58
+C+++ HLA D R+ + ALRV++R+ L ++ +++ EW+ F QG F Y +
Sbjct: 468 LCQLLQCDHLAQDERFASNALRVQHRDALITKLTDTLAQRSACEWVSHFEQGEAKFAYGE 527
Query: 59 VNSISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
+ ++ + +A Q +V+ +S DI + G AV ++ T + PP L +H +
Sbjct: 528 ILNVCEAYAQPQAQARDMVQSVSMADGHDISVPGLAVKFARTPATLHMGPPDLDQHRHSL 587
Query: 119 LKDL 122
+ +
Sbjct: 588 IAEF 591
>gi|342870876|gb|EGU73799.1| hypothetical protein FOXB_15707 [Fusarium oxysporum Fo5176]
Length = 434
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 129/306 (42%), Positives = 197/306 (64%), Gaps = 7/306 (2%)
Query: 197 LYENFYSLDLALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDE 256
L+ + S ++ P LPL+ +R+LD++R++AGP+C +L DLGAEVIK+E P GD+
Sbjct: 12 LWRSALSRRGNATAATPRLPLTGIRVLDISRVLAGPYCAQILGDLGAEVIKIEHPTRGDD 71
Query: 257 CRKWGPPF------LNNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVEN 310
R WGPPF S Y+ VNRNK+SV V FK EG ++I+ LA + D++VEN
Sbjct: 72 TRAWGPPFSPYKDGRGGEGESAYYLSVNRNKRSVAVSFKEKEGAKLIQTLAAKADIIVEN 131
Query: 311 FVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHP 370
++PG L + L Y L++ N +LIY S+TG+G GPY +R G+D++ + GL+HITG
Sbjct: 132 YLPGTLKKYGLDYNTLAKTNPRLIYASITGYGQTGPYSNRAGFDVMVEAEMGLMHITGPR 191
Query: 371 DGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYL 430
DGPP KVG+A DL TGLYA +++AA++ + +G+GQ +D L QV+ L N+ + L
Sbjct: 192 DGPPVKVGVAVTDLTTGLYAVNSILAAVIERSHSGQGQALDVCLSDCQVATLANMAQSVL 251
Query: 431 NAG-IEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
G +G R+GTSH +VVP++ F+T +G + IG +D+ + +C+ + + A D R+ T
Sbjct: 252 VTGKRDGGRYGTSHPSVVPYRAFRTKDGDILIGGANDRLFGVLCQCLGQEEWADDERFST 311
Query: 490 GALILA 495
+ +A
Sbjct: 312 NSARVA 317
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 84/140 (60%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + + A D R+ T + RV NR++L + IE T K ++EWL IF+ YA++N
Sbjct: 294 LCQCLGQEEWADDERFSTNSARVANRDVLERMIEDITSSKLSKEWLDIFEDTGLAYAKIN 353
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I H+ ++KEI H G +K++ V YS TQP +RTPPP LGEHTD VL+
Sbjct: 354 DIKDTLEHSHVVARDMIKEIKHPACGQLKVLNSPVKYSRTQPSIRTPPPLLGEHTDEVLR 413
Query: 121 DLLNYDETTIAKLKEKKILG 140
D+L D T I +L+E K +G
Sbjct: 414 DVLGLDPTEIKRLRENKAVG 433
>gi|163792869|ref|ZP_02186845.1| CAIB/BAIF family protein [alpha proteobacterium BAL199]
gi|159181515|gb|EDP66027.1| CAIB/BAIF family protein [alpha proteobacterium BAL199]
Length = 411
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 124/278 (44%), Positives = 178/278 (64%), Gaps = 5/278 (1%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ +R++D +RI+AGP CT L DLGA+++K+E+P GD+ RKWGPPFL +T S
Sbjct: 11 LAGIRVIDCSRILAGPICTQTLGDLGADIVKIERPGMGDDTRKWGPPFLKDADGQDTSES 70
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +D PEG +++ L + DV +ENF G + R L ++ L E
Sbjct: 71 AYYLSCNRNKRSVGLDISRPEGCEVLLKLVETADVFIENFKVGDMARYGLSFEQLRERFP 130
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+L+Y S+TGFG GPY R GYD +A +GG++ +TG G P KVG+A D+ TG++
Sbjct: 131 RLVYASITGFGQTGPYAPRAGYDFLAQGMGGIMSVTGEDGGEPMKVGVAIADVMTGMHTA 190
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A++AAL H+ TG+GQ ID LL TQVS L+N G NYL G R G +H N+ P+QV
Sbjct: 191 TAILAALRHRDATGRGQYIDAALLDTQVSWLVNQGLNYLVGGTAPTRLGNAHPNITPYQV 250
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
F T++G+V +G G+D+Q+ C+ + DPR+ T
Sbjct: 251 FATADGHVILGVGNDQQFAKFCRFAGRADIVADPRFTT 288
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 66/143 (46%), Gaps = 6/143 (4%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+ + DPR+ T RV NR + A ++T +W+ + V P VN
Sbjct: 271 FCRFAGRADIVADPRFTTNVARVRNRAESVATVAAIMQTRSTADWVAGLESVGVPCGPVN 330
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSL----TQPEVRTPPPALGEHTD 116
I QVFAD +Q + + I + + P++AY L T E R PPP LG+HT+
Sbjct: 331 DIDQVFADPQVQARGMQQTIPGHPFSPDGV--PSIAYPLKLSDTPAEYRRPPPILGQHTE 388
Query: 117 YVLKDLLNYDETTIAKLKEKKIL 139
VL L +AKLKE +
Sbjct: 389 EVLGGELGLSVDELAKLKESGAI 411
>gi|187927839|ref|YP_001898326.1| L-carnitine dehydratase/bile acid-inducible protein F [Ralstonia
pickettii 12J]
gi|187724729|gb|ACD25894.1| L-carnitine dehydratase/bile acid-inducible protein F [Ralstonia
pickettii 12J]
Length = 406
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 131/282 (46%), Positives = 183/282 (64%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDLTR++AGP+C LAD GA+VIKVE+P GD+ R WGPP+L +T +
Sbjct: 4 LSHLRVLDLTRVLAGPWCAQNLADFGADVIKVERPGAGDDTRTWGPPWLKDEAGQDTAEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+S+ VD TPEGQ I++ LA DV++EN+ G+L + L Y + +
Sbjct: 64 AYYLAANRNKRSITVDISTPEGQDIVRQLAAHADVVLENYKVGQLAKYGLDYASIKAVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
++YCS+TGFG GPY R GYD I +GG + +TG P G P K G+A DL TG
Sbjct: 124 DVVYCSITGFGQTGPYAARAGYDFIVQGMGGFMSLTGERDDLPGGGPQKAGVAISDLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA AV+AAL H+ +TG+GQ ID LL QV+ML N+ NYL +G KRWG +H N+V
Sbjct: 184 MYATVAVLAALAHRDRTGEGQYIDMALLDVQVAMLANMNTNYLASGQAPKRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+ +NG++ + G+D Q++ + LA DPR+ T
Sbjct: 244 PYQTFQAANGWIIVAVGNDGQFRRFVDAGGMPELADDPRFAT 285
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 71/133 (53%)
Query: 7 LQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVF 66
+ LA DPR+ T RV NR++L + + EW+ + P +NS+ +VF
Sbjct: 274 MPELADDPRFATNPQRVANRDVLVPILAEMVKRLSKGEWIDKLEAAGVPCGPINSLDEVF 333
Query: 67 ADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYD 126
+E +Q L ++ H G +K+VG V S T P+ + PP LGEHT+ VL+D+LN +
Sbjct: 334 NNEQVQARGLRVDLPHPSAGTVKLVGSPVKMSATPPKAASHPPLLGEHTEAVLRDVLNLN 393
Query: 127 ETTIAKLKEKKIL 139
I L+ + ++
Sbjct: 394 REQIETLRARGVI 406
>gi|406922231|gb|EKD59807.1| hypothetical protein ACD_54C01124G0003 [uncultured bacterium]
Length = 376
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 126/280 (45%), Positives = 185/280 (66%), Gaps = 3/280 (1%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL--NNTELS 271
+ PL+ V++++L RI+AGP+ LADLGA+VIKVE P GD+ R+WGPPF+ + + +
Sbjct: 2 TTPLAGVKVIELARILAGPWAGQTLADLGADVIKVEAP-EGDDTRRWGPPFITRDGDKSA 60
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NR K+S+ DF+TPEGQ+ ++ L DVL+ENF G L + L Y+ L ++N
Sbjct: 61 AYFYATNRGKRSITCDFRTPEGQETVRKLVADADVLIENFKVGGLAKYGLDYESLRKVNP 120
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+L+YCSVTGFG GPY R GYD I + GL+ +TG PDG P KVG+A D+ TG+Y+
Sbjct: 121 RLVYCSVTGFGQTGPYAHRAGYDFIIQGMAGLMSVTGEPDGQPQKVGVAVTDVFTGVYSA 180
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A++AALL + +TG+GQ ID +LL S++ N NYL +G G +H N+ P+ V
Sbjct: 181 TAILAALLQRSRTGQGQHIDMSLLDVATSIMANQSMNYLVSGKPPGMMGNAHPNLAPYAV 240
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
F ++G++ + TG+D QY+ +C +++L +A YLT A
Sbjct: 241 FDCADGWIILATGNDAQYRRLCGILHLSDMAEAAEYLTNA 280
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 5/119 (4%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C +++L +A YLT A R+ NR L I A T + + L + P +N
Sbjct: 261 LCGILHLSDMAEAAEYLTNADRIANRVALTARITAATKTWSKADLLAACEAEGVPAGPIN 320
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVL 119
S+ +VF D + L +++ G + P + +S + + P P LGEH VL
Sbjct: 321 SLDEVFTDPQV----LARQMQIAPEGLPGVRSP-MTFSGAELSLARPAPKLGEHQAEVL 374
>gi|56477121|ref|YP_158710.1| CoA-transferase [Aromatoleum aromaticum EbN1]
gi|56313164|emb|CAI07809.1| CoA-transferase [Aromatoleum aromaticum EbN1]
Length = 407
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/282 (47%), Positives = 186/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+RI+AGP+ +LADLGA+VIKVE+P GD+ R WGPPFL ++T+++
Sbjct: 5 LSHIRVLDLSRILAGPWAGQILADLGADVIKVERPGEGDDTRHWGPPFLKDTHGHDTDVA 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF C NRNK+S+ VD P+G+Q+++DLA +CDV++ENF G L R L Y L +N
Sbjct: 65 AYFLCANRNKRSITVDMTKPDGRQLLRDLAGKCDVVLENFKQGGLARHGLDYASLKTVNP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TGFG GPY R GYD + +GGL+ +TG P G P KVG+A D+ TG
Sbjct: 125 RLVYCSITGFGQDGPYAARAGYDFLIQGLGGLMSLTGRPGDEPGGGPMKVGVALTDILTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA AV AAL + +TG+GQ ID LL Q++ L N NYL G+ R G +H N+V
Sbjct: 185 LYAANAVQAALAARDRTGEGQHIDLALLDVQIACLANQAMNYLTTGVSPGRLGNAHPNIV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F T +GY+ + G+D Q+ C+ LA D R+ T
Sbjct: 245 PYQDFPTDDGYMILAIGNDAQFARFCEAAGDPSLATDARFAT 286
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 70/139 (50%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+ LA D R+ T RV +R +L + T+ +TT +W+ + + P +N
Sbjct: 269 FCEAAGDPSLATDARFATNKARVGHRAVLIPLLNKLTIRRTTTDWIARLEALGVPCGPIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+++ VFAD ++ L ++ H G + V + S T E R PPP LGEHTD +L
Sbjct: 329 TLADVFADPQVRARGLRIDLPHPLAGRVPQVASPMRLSATPVEYRLPPPLLGEHTDEILA 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
LL IA+L+ +++
Sbjct: 389 SLLGLPAERIARLRHDEVI 407
>gi|445487554|ref|ZP_21457825.1| CoA-transferase family III protein [Acinetobacter baumannii AA-014]
gi|444768444|gb|ELW92659.1| CoA-transferase family III protein [Acinetobacter baumannii AA-014]
Length = 409
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 131/281 (46%), Positives = 182/281 (64%), Gaps = 9/281 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ N T S
Sbjct: 4 LQGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPRVGDDTRMWGPPWMPDQDGNMTRES 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF C NRNK SV VD TPEGQ +I ++AK DV++EN+ G L + L Y LSE+N
Sbjct: 64 GYFQCTNRNKYSVAVDITTPEGQALIYEIAKTADVVIENYKTGSLAKYGLDYASLSELNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
++YCS+TGFG GP + PGYD I + GL+ ITG PD G KVG+A +D+ TG
Sbjct: 124 NIVYCSITGFGQDGPRAEEPGYDFIIQGMSGLMSITGEPDDVVGGGAQKVGVAVVDIQTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AAL+ + TG+GQ ID +LL QV+ L N G NYL +G +R G H ++V
Sbjct: 184 LYSTIAIQAALIARSHTGRGQYIDMSLLDVQVAALANQGMNYLVSGKAPQRMGNQHPSIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYL 488
P+Q FK + I G+DKQ++D+C + L + +++
Sbjct: 244 PYQTFKAKDKEFIIACGNDKQFKDLCIAIGYPELLENEKFV 284
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 60/139 (43%), Gaps = 2/139 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L + +++ RV+ R L + + KT +EW+ + + P +N
Sbjct: 268 LCIAIGYPELLENEKFVRNQDRVKYRNELIPLLSEHFLRKTAKEWVDMIHALKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI A+ I LV I H + +G + S T E PP LGEHT +L
Sbjct: 328 SIEDALAEPQIVHRNLVVNIPHRLNEKFQTIGSPIKLSDTPVEYHHAPPELGEHTARILS 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+E T LKEK I+
Sbjct: 388 RFKTAEELT--ALKEKGII 404
>gi|161620301|ref|YP_001594187.1| acyl-CoA transferase [Brucella canis ATCC 23365]
gi|376277062|ref|YP_005153123.1| Protein C7orf10 [Brucella canis HSK A52141]
gi|161337112|gb|ABX63416.1| Protein C7orf10 [Brucella canis ATCC 23365]
gi|363405436|gb|AEW15730.1| Protein C7orf10 [Brucella canis HSK A52141]
Length = 413
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 134/280 (47%), Positives = 181/280 (64%), Gaps = 9/280 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ R+LD++R++AGP+ +LADLGAEVIK+E+P TGD+ R WGPP++ N T +
Sbjct: 4 LTGYRVLDMSRVLAGPWFGQILADLGAEVIKIERPRTGDDTRDWGPPWMKDEQGNPTREA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+Y+ NR K SV ++ +PEGQ +++ + +CDVL+EN+ G L + L Y+ LS IN
Sbjct: 64 SYYQSANRGKFSVALNIASPEGQDLLRKMVAECDVLIENYKAGSLAKYGLDYETLSAINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCSVTGFG GP PGYD I IGGL+ ITG P G P KVG+A DL TG
Sbjct: 124 GLVYCSVTGFGQTGPRAPEPGYDFIIQGIGGLMSITGERDDKPGGGPQKVGVAVADLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL + KTGKGQ ID LL QV+ L N NYL +G R+G +HAN+V
Sbjct: 184 LYSAIAIEAALLSRAKTGKGQHIDMALLDVQVAALCNQSQNYLASGRPPGRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
P+QVF+ S+ I G+D Q+ +C + L L DPR+
Sbjct: 244 PYQVFRASDRDFIIACGNDAQFVSLCDAIGLPDLPKDPRF 283
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L L DPR+ + RV +R+ + + A + T +EW+ P +N
Sbjct: 268 LCDAIGLPDLPKDPRFTRNSDRVIHRDEIIGILAAHFLTGTADEWIGRIHPRGVPVGAIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I++ + ++ ++ +I H D VG + S T E + P LGEHTD +L+
Sbjct: 328 DIARALDEPQVKARNMLVQIPHPLNKDFVTVGSPIKLSGTPVEYKRAAPMLGEHTDTLLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
L D+ + LK + I+
Sbjct: 388 QLAKLDDDRLNDLKSRGII 406
>gi|300692181|ref|YP_003753176.1| formyl-CoA transferase, CaiB/BaiF family [Ralstonia solanacearum
PSI07]
gi|299079241|emb|CBJ51913.1| putative Formyl-CoA transferase, CaiB/BaiF family [Ralstonia
solanacearum PSI07]
gi|344170356|emb|CCA82764.1| putative Formyl-CoA transferase, CaiB/BaiF family [blood disease
bacterium R229]
Length = 406
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/282 (47%), Positives = 185/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDLTR++AGP+C LAD GA+VIKVE+P GD+ R WGPP+L N+T +
Sbjct: 4 LSHLRVLDLTRVLAGPWCAQNLADFGADVIKVERPGAGDDTRTWGPPWLKDAAGNDTAEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+S+ VD TPEGQ+I++ LA DV++EN+ G+L + L Y L +
Sbjct: 64 AYYLAANRNKRSITVDISTPEGQEIVRRLAAHSDVVLENYKVGQLKKYGLDYDALKAVKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCS+TGFG GPY R GYD I +GG + +TG P G P K G+A DL TG
Sbjct: 124 DLVYCSITGFGQTGPYAARAGYDFIVQGMGGFMSLTGERDDLPGGGPQKAGVAISDLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA AV+AAL H+ +TG+GQ ID LL QV+ML N+ NYL +G RWG +H N+V
Sbjct: 184 MYATVAVLAALAHRDRTGEGQYIDMALLDVQVAMLANMNTNYLASGQAPGRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+T++G++ + G+D Q++ + LA DPR+ T
Sbjct: 244 PYQTFQTADGWIIVAVGNDGQFRRFVEAGGSPGLADDPRFAT 285
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 64/130 (49%)
Query: 10 LALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADE 69
LA DPR+ T RV +R++L + EW+ + P +N++ +VF +
Sbjct: 277 LADDPRFATNPQRVAHRDVLVPILAGMVRRFGKAEWIDRLEAAGVPCGPINTLDEVFDNA 336
Query: 70 HIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETT 129
++ L ++ H G + +VG V S T P PP LGEHT+ VL+D+L+
Sbjct: 337 QVKARGLRIDLPHPSAGTVPLVGSPVRMSATPPRAVAHPPLLGEHTEAVLRDVLDLPSAQ 396
Query: 130 IAKLKEKKIL 139
I L+ + ++
Sbjct: 397 IEALRAQGVI 406
>gi|429215914|ref|ZP_19207073.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
sp. M1]
gi|428153567|gb|EKX00121.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
sp. M1]
Length = 411
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 132/284 (46%), Positives = 185/284 (65%), Gaps = 9/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ +++ +
Sbjct: 4 LSGYRVLDLSRVLAGPWCGQILADLGAEVIKIERPGAGDDTRGWGPPYMKAADGSDSPEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+Y+ NRNK SV ++ +PEGQ +++ LA +CDVL+EN+ G L + L Y+ LS++N
Sbjct: 64 SYYQSTNRNKLSVALNLASPEGQALVRALAGECDVLIENYKAGSLAKYGLDYESLSKLNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPC----KVGIASIDLATG 387
+L+YCS+TGFG GP + PGYD I +GGL+ ITG DG P KVG+A D+ TG
Sbjct: 124 RLVYCSITGFGQTGPRAEEPGYDFIIQGMGGLMSITGEKDGVPGAGPQKVGVAVSDVMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL + KTG+GQ D LL QV+ML N NYL G R G +H N+V
Sbjct: 184 LYSVVAIQAALLAREKTGRGQHCDMALLDVQVAMLGNQSQNYLATGRSPGRQGNAHVNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P+QVF S+ I G+D Q+ +C+ + L L DPR+ A
Sbjct: 244 PYQVFSGSDRDFIIACGNDSQFVALCEAIGLPELPKDPRFARNA 287
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 3/147 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + L L DPR+ A RV NRE + ++ + + + W+ V P +N
Sbjct: 268 LCEAIGLPELPKDPRFARNADRVRNREAIVGQLAEHFRKDSADNWVARIHAVKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I + + + ++ EI H ++VG + S T + + P P LGEHTD VLK
Sbjct: 328 DIGRALEEPQVLARDMLVEIPHALNPGFRMVGSPLKLSETPVQYQRPAPMLGEHTDEVLK 387
Query: 121 DLLNYDETTIAKLKEKKILGLIERLTK 147
L DE +A+LK + G+IE+L +
Sbjct: 388 RRLGLDEARLAELKAQ---GVIEQLGE 411
>gi|312112296|ref|YP_003990612.1| Formyl-CoA transferase [Geobacillus sp. Y4.1MC1]
gi|311217397|gb|ADP76001.1| Formyl-CoA transferase [Geobacillus sp. Y4.1MC1]
Length = 387
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 132/273 (48%), Positives = 185/273 (67%), Gaps = 2/273 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L VRILD+TR++AGP+ TM+L DLGA+VIKVE P D+ R WGPPF N +S Y+T
Sbjct: 5 LDGVRILDMTRVLAGPYATMILGDLGADVIKVEAPGGSDDTRFWGPPFQNG--MSAYYTA 62
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
VNRNK+S+ V+ K +G+ II+ LAK DV++ NF G +++ LGY LS +N +LIYC
Sbjct: 63 VNRNKRSITVNLKEEKGKTIIRRLAKTADVIIHNFKTGTMEKFGLGYDELSSLNPRLIYC 122
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S+TGFG GPY+ PGYD I ++ G + I G P P KVG+A D+ TGLYA A+ A
Sbjct: 123 SITGFGETGPYRHLPGYDYIIQAMSGWMSINGTPSSGPLKVGVAITDVFTGLYAAIAIEA 182
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
ALL + KTG+GQKID +L + +S L+NV ANYL +G G H N+VP+ ++ S+
Sbjct: 183 ALLARMKTGRGQKIDLSLFDSAISALVNVAANYLMSGNVPAPLGNEHPNIVPYSTYEASD 242
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
G + I G+D+Q+Q C++++ + +DPR+ T
Sbjct: 243 GPIVIAVGNDRQFQAFCELLSDPTIGMDPRFQT 275
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 66/127 (51%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C++++ + +DPR+ T RV +RE L K I +T ++T EW + P V
Sbjct: 258 FCELLSDPTIGMDPRFQTNPGRVAHREELNKRINEETKKRTRAEWKRLLDQKGIPCGPVQ 317
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q+F +V + H K G +++VG + S T+ R PPP GEH D V+K
Sbjct: 318 NLEQLFQHPQTLARDMVITMHHGKIGPLQLVGSPIKLSDTKVSYRLPPPLAGEHNDEVIK 377
Query: 121 DLLNYDE 127
+++N E
Sbjct: 378 EIMNETE 384
>gi|240273674|gb|EER37194.1| CAIB/BAIF family enzyme [Ajellomyces capsulatus H143]
Length = 331
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 129/298 (43%), Positives = 189/298 (63%), Gaps = 8/298 (2%)
Query: 198 YENFYSLDLALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDEC 257
+ +F + + +LPL+ +R+LD++R++AGP+CT +L DLGAEVIK+E P GD+
Sbjct: 30 WRSFVTAATTTAQSIDNLPLAGIRVLDMSRVLAGPYCTQILGDLGAEVIKIEHPTRGDDT 89
Query: 258 RKWGPPFL-------NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVEN 310
R WGPPF S Y+ VNRNKKS+ + F P G +I+ L K+CD+LVEN
Sbjct: 90 RAWGPPFAKYKVDGKEGPGESAYYLSVNRNKKSLGLSFAHPSGIEILHKLVKECDILVEN 149
Query: 311 FVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHP 370
++PG L + + Y + IN +LIY S+TG+G GPY R GYD++ + GL+HITG
Sbjct: 150 YIPGSLKKYKMDYDTVKVINPKLIYASITGYGQTGPYSQRAGYDVMVEAEMGLMHITGSR 209
Query: 371 DGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYL 430
DGPP KVG+A DL TGLY A+MAALL + KT KGQ ID L QV+ L N+ ++ L
Sbjct: 210 DGPPVKVGVAVTDLTTGLYTSNAIMAALLARAKTTKGQHIDACLSDCQVATLSNLASSAL 269
Query: 431 NAG-IEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
+G + RWGT+H ++VP++ ++T +G + +G G+DK + +C + +D R+
Sbjct: 270 ISGEKDSGRWGTAHPSIVPYRAYETKDGDILLGGGNDKLFGVLCDGLGQPEWKVDERF 327
>gi|359400473|ref|ZP_09193454.1| L-carnitine dehydratase/bile acid-inducible protein F
[Novosphingobium pentaromativorans US6-1]
gi|357598153|gb|EHJ59890.1| L-carnitine dehydratase/bile acid-inducible protein F
[Novosphingobium pentaromativorans US6-1]
Length = 367
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 127/267 (47%), Positives = 174/267 (65%), Gaps = 4/267 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELS---T 272
PL +R+++ RI+AGP+ + ADLGAEVIKVE P GD+ R+WGPPF+ + + S
Sbjct: 6 PLHGLRVVEFARILAGPWAGQIFADLGAEVIKVESP-AGDDTRRWGPPFVEHEDGSREAA 64
Query: 273 YFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQ 332
YF NR K+ V +DF TPEGQ ++LA DVL+ENF G L R L Y LS IN +
Sbjct: 65 YFHATNRGKQFVTIDFATPEGQAQARELAANADVLIENFKVGGLVRYGLDYPSLSAINPR 124
Query: 333 LIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHG 392
L+YCS+TGFG GPY RPGYD IA + G++ +TG PDGPP K+G+A D+ TGLYA
Sbjct: 125 LVYCSITGFGQDGPYAARPGYDFIAQGLSGIMDLTGEPDGPPQKIGVAYADIMTGLYAVI 184
Query: 393 AVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVF 452
A+ AAL + ++G GQ+ID LL V L N NYL +G+ R G H N+ P+Q +
Sbjct: 185 AIHAALAERERSGMGQQIDMALLDVMVGTLANQAMNYLVSGVAPSRAGNVHPNIAPYQSY 244
Query: 453 KTSNGYVTIGTGSDKQYQDMCKVMNLQ 479
TS+G++ + G+D+Q+Q C V+ ++
Sbjct: 245 ATSDGWIILAVGNDEQFQRCCAVLGVE 271
>gi|311106609|ref|YP_003979462.1| CoA-transferase [Achromobacter xylosoxidans A8]
gi|310761298|gb|ADP16747.1| CoA-transferase family III family protein 24 [Achromobacter
xylosoxidans A8]
Length = 413
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 136/286 (47%), Positives = 180/286 (62%), Gaps = 5/286 (1%)
Query: 209 SSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN- 267
++ P LS+++ILDLTR++AGP+ T LAD+GA+VIKVE+P GD+ R WGPPFL
Sbjct: 7 AAAQPRGALSHLKILDLTRVLAGPWATQTLADMGADVIKVERPEHGDDTRGWGPPFLTGA 66
Query: 268 ----TELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGY 323
T S+YF NR K+S+ VD T EGQ +I +LAK DVLVEN+ G L R L Y
Sbjct: 67 DGAETRDSSYFLSANRGKRSITVDLATAEGQALIAELAKDSDVLVENYKVGTLARFGLDY 126
Query: 324 KHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASID 383
+ L IN +LIYCS+TGFG GPY PGYD + +GGL+ ITG P G P K GIA D
Sbjct: 127 ESLRAINPRLIYCSITGFGQDGPYAPLPGYDFVFQGMGGLMSITGDPAGEPMKSGIAITD 186
Query: 384 LATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSH 443
L TG+YA A++AA+ H+ +G GQ ID +LL +++ NY +G +R G +H
Sbjct: 187 LLTGVYASTAILAAVEHRRVSGVGQYIDMSLLDCVITISSYQAINYFLSGRVPQRMGNAH 246
Query: 444 ANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+N+VP+QVF G V + G+D QY+ C + LA D RY T
Sbjct: 247 SNMVPYQVFACKEGSVIVAVGNDGQYRAFCGAIGRADLAADERYAT 292
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 64/139 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C + LA D RY T R NR+ L I +T EW+ I Q V+ P +
Sbjct: 275 FCGAIGRADLAADERYATAGQRNRNRDTLIPPIAEAMRARTMLEWVEILQAVNVPCGPIY 334
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I QVF D H++ + + H D V + T P LG+HTD VL+
Sbjct: 335 NIEQVFQDPHVRHRGMQLSLPHAAGVDTPAVANPIRMRDTPMRYDRAAPTLGQHTDSVLR 394
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ L D++ IA+LK + I+
Sbjct: 395 ERLGLDDSRIAELKTRGII 413
>gi|33595571|ref|NP_883214.1| hypothetical protein BPP0889 [Bordetella parapertussis 12822]
gi|33565649|emb|CAE40297.1| conserved hypothetical protein [Bordetella parapertussis]
Length = 408
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 131/286 (45%), Positives = 180/286 (62%), Gaps = 9/286 (3%)
Query: 213 PSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NN 267
P+ PL R+LDLTR++AGP+CT LADLGAEVIKVE+P GDE R WGPP++ +
Sbjct: 2 PNKPLQKYRVLDLTRVLAGPWCTQNLADLGAEVIKVERPGVGDETRGWGPPWIPAGAASK 61
Query: 268 TELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLS 327
S YF NR KKS+ +DF T +GQ +++ LA CDVLVEN+ G L R LGY+ L
Sbjct: 62 RRDSAYFGSANRGKKSITIDFTTAQGQALVRQLAADCDVLVENYKTGTLARYGLGYEDLK 121
Query: 328 EINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASID 383
+N L+YCSVTGFG PY+ +PGYD + ++ GL+ ITG P G P KVGIA D
Sbjct: 122 AVNPGLVYCSVTGFGHTDPYRHKPGYDFVFQAMSGLMSITGERDDLPGGGPQKVGIAVAD 181
Query: 384 LATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSH 443
+ TG+Y+ AV+AALL + G+GQ +D LL ++ N NY+ +G +R+G +H
Sbjct: 182 ITTGMYSTVAVLAALLERESHGRGQHLDMALLDCAMAFNSNQAVNYMASGSMPRRYGNAH 241
Query: 444 ANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+N VP+QVF T +G + + G+D + C+ L D R++T
Sbjct: 242 SNAVPYQVFDTRDGQIVVAVGNDALFAAYCRAAQRPDLCADARFVT 287
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 65/138 (47%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C+ L D R++T + R++NR+ L ++ KT+ +WL + P A +N
Sbjct: 271 CRAAQRPDLCADARFVTVSGRLQNRDELLSQLAVVMAGKTSAQWLAVLDAAGVPCAPIND 330
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
Q AD ++ + I+ E + + + +S T + PP LG+HT VL++
Sbjct: 331 FEQALADPQVKARNIETHIALEDGAVFRTIASPLRFSETPLDHLAGPPMLGQHTADVLRE 390
Query: 122 LLNYDETTIAKLKEKKIL 139
L DE A L++ ++
Sbjct: 391 RLGLDEAQQAGLRQAGVI 408
>gi|423721165|ref|ZP_17695347.1| acyl-CoA transferase [Geobacillus thermoglucosidans TNO-09.020]
gi|383365880|gb|EID43172.1| acyl-CoA transferase [Geobacillus thermoglucosidans TNO-09.020]
Length = 387
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 132/273 (48%), Positives = 184/273 (67%), Gaps = 2/273 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L VRILD+TR++AGP+ TM+L DLGA+VIKVE P D+ R WGPPF N +S Y+T
Sbjct: 5 LDGVRILDMTRVLAGPYATMILGDLGADVIKVEAPGGSDDTRFWGPPFQNG--MSAYYTA 62
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
VNRNK+S+ V+ K G+ II+ LAK DV++ NF G +++ LGY LS +N +LIYC
Sbjct: 63 VNRNKRSITVNLKEENGKTIIRRLAKTADVIIHNFKTGTMEKFGLGYDELSSLNPRLIYC 122
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S+TGFG GPY+ PGYD I ++ G + I G P P KVG+A D+ TGLYA A+ A
Sbjct: 123 SITGFGETGPYRHLPGYDYIIQAMSGWMSINGTPSSGPLKVGVAITDVFTGLYAAIAIEA 182
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
ALL + KTG+GQKID +L + +S L+NV ANYL +G G H N+VP+ ++ S+
Sbjct: 183 ALLARMKTGRGQKIDLSLFDSAISALVNVAANYLMSGNVPAPLGNEHPNIVPYSTYEASD 242
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
G + I G+D+Q+Q C++++ + +DPR+ T
Sbjct: 243 GPIVIAVGNDRQFQAFCELLSDPTIGMDPRFQT 275
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 66/127 (51%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C++++ + +DPR+ T RV +RE L K I +T ++T EW + P V
Sbjct: 258 FCELLSDPTIGMDPRFQTNPGRVAHREELNKRINEETKKRTRSEWKRLLDQKGIPCGPVQ 317
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q+F +V + H K G +++VG + S T+ R PPP GEH D V+K
Sbjct: 318 NLEQLFQHPQTLARDMVITMHHGKIGPLQLVGSPIKLSDTKVSYRLPPPLAGEHNDEVIK 377
Query: 121 DLLNYDE 127
+++N E
Sbjct: 378 EIMNETE 384
>gi|445432843|ref|ZP_21439516.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC021]
gi|444758181|gb|ELW82683.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC021]
Length = 409
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 131/281 (46%), Positives = 181/281 (64%), Gaps = 9/281 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ N T S
Sbjct: 4 LQGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPRVGDDTRMWGPPWMPDQDGNMTRES 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF C NRNK SV VD TPEGQ +I ++AK DV++EN+ G L + L Y LSE+N
Sbjct: 64 GYFQCTNRNKYSVAVDITTPEGQALIYEIAKTADVVIENYKTGSLAKYGLDYASLSELNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
++YCS+TGFG GP PGYD I + GL+ ITG PD G KVG+A +D+ TG
Sbjct: 124 NIVYCSITGFGQDGPRAAEPGYDFIIQGMSGLMSITGEPDDVAGGGAQKVGVAVVDIQTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AAL+ + TG+GQ ID +LL QV+ L N G NYL +G +R G H ++V
Sbjct: 184 LYSTIAIQAALIARSHTGRGQYIDMSLLDVQVAALANQGMNYLASGKAPQRMGNQHPSIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYL 488
P+Q FK + I G+DKQ++D+C + L + +++
Sbjct: 244 PYQTFKAKDKEFIIACGNDKQFKDLCIAIGYPELLENEKFV 284
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 2/139 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L + +++ RV+ R+ L + ++KT +EW+ + + P +N
Sbjct: 268 LCIAIGYPELLENEKFVRNQDRVKYRDELIPLLSEYFLQKTAKEWVDMIHALKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI A+ I LV I H + + +G + S T E PP LGEHT +L
Sbjct: 328 SIEDALAEPQIVHRNLVVNIPHRLNENFQTIGSPIKLSDTPVEYHHAPPELGEHTAQILS 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+E +A LKEK I+
Sbjct: 388 RFKTAEE--LAALKEKGII 404
>gi|336236715|ref|YP_004589331.1| formyl-CoA transferase [Geobacillus thermoglucosidasius C56-YS93]
gi|335363570|gb|AEH49250.1| Formyl-CoA transferase [Geobacillus thermoglucosidasius C56-YS93]
Length = 387
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 132/273 (48%), Positives = 184/273 (67%), Gaps = 2/273 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L VRILD+TR++AGP+ TM+L DLGA+VIKVE P D+ R WGPPF N +S Y+T
Sbjct: 5 LDGVRILDMTRVLAGPYATMILGDLGADVIKVEAPGGSDDTRFWGPPFQNG--MSAYYTA 62
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
VNRNK+S+ V+ K G+ II+ LAK DV++ NF G +++ LGY LS +N +LIYC
Sbjct: 63 VNRNKRSITVNLKEENGKTIIRRLAKTADVIIHNFKTGTMEKFGLGYDELSSLNPRLIYC 122
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S+TGFG GPY+ PGYD I ++ G + I G P P KVG+A D+ TGLYA A+ A
Sbjct: 123 SITGFGETGPYRHLPGYDYIIQAMSGWMSINGTPSSGPLKVGVAITDVFTGLYAAIAIEA 182
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
ALL + KTG+GQKID +L + +S L+NV ANYL +G G H N+VP+ ++ S+
Sbjct: 183 ALLARMKTGRGQKIDLSLFDSAISALVNVAANYLMSGNVPAPLGNEHPNIVPYSTYEASD 242
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
G + I G+D+Q+Q C++++ + +DPR+ T
Sbjct: 243 GPIVIAVGNDRQFQAFCELLSDPTIGMDPRFQT 275
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 66/127 (51%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C++++ + +DPR+ T RV +RE L K I +T ++T EW + P V
Sbjct: 258 FCELLSDPTIGMDPRFQTNPGRVAHREELNKRINEETKKRTQAEWKRLLDQKGIPCGPVQ 317
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q+F +V + H K G +++VG + S T+ R PPP GEH D V+K
Sbjct: 318 NLEQLFQHPQTLARDMVITMHHGKIGPLQLVGSPIKLSDTKVSYRLPPPLAGEHNDEVIK 377
Query: 121 DLLNYDE 127
+++N E
Sbjct: 378 EIMNETE 384
>gi|299067647|emb|CBJ38856.1| putative Formyl-CoA transferase, CaiB/BaiF family [Ralstonia
solanacearum CMR15]
Length = 406
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 132/282 (46%), Positives = 186/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDLTR++AGP+C LAD GA+VIKVE+P GD+ R WGPP+L ++T +
Sbjct: 4 LSHLRVLDLTRVLAGPWCAQNLADFGADVIKVERPGAGDDTRTWGPPWLKDAAGSDTAEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+S+ VD TPEGQ+I++ LA DV++EN+ G+L + L Y L +
Sbjct: 64 AYYLAANRNKRSITVDISTPEGQEIVRRLAAHSDVVLENYKVGQLKKYGLDYDALKAVRP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCS+TGFG GPY R GYD I +GG + +TG P G P K G+A DL TG
Sbjct: 124 DLVYCSITGFGQTGPYAARAGYDFIVQGMGGFMSLTGERDDLPGGGPQKAGVAISDLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA AV+AAL H+ +TG+GQ ID LL QV+ML N+ NYL +G +RWG +H N+V
Sbjct: 184 MYATVAVLAALAHRDRTGEGQYIDMALLDVQVAMLANMNTNYLASGQAPRRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+T++G++ + G+D Q++ + LA DPR+ T
Sbjct: 244 PYQTFQTADGWIIVAVGNDGQFRRFVEAGANPELADDPRFAT 285
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 68/131 (51%)
Query: 9 HLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFAD 68
LA DPR+ T RV NR++L + EW+ + P +NS+ +VF +
Sbjct: 276 ELADDPRFATNPQRVANRDVLVPILADMVRRLGKAEWISRLEAAGVPCGPINSLDEVFDN 335
Query: 69 EHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDET 128
E ++ L ++ H G + +VG V S T P+ PP LGEHT+ VL+D+L+ +
Sbjct: 336 EQVKARGLRVDLPHPSAGTVPLVGSPVRMSATPPQAVAHPPLLGEHTEAVLRDVLDLPQA 395
Query: 129 TIAKLKEKKIL 139
IA L+ + ++
Sbjct: 396 QIAALRAQGVI 406
>gi|421809696|ref|ZP_16245529.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC035]
gi|410414056|gb|EKP65863.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC035]
Length = 409
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 130/281 (46%), Positives = 181/281 (64%), Gaps = 9/281 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ N T S
Sbjct: 4 LQGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPRVGDDTRMWGPPWMPDQDGNMTRES 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF C NRNK SV VD TPEGQ +I ++AK DV++EN+ G L + L Y LSE+N
Sbjct: 64 GYFQCTNRNKYSVAVDITTPEGQALIYEIAKTADVVIENYKTGSLAKYGLDYASLSELNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
++YCS+TGFG GP + PGYD I + GL+ ITG PD G KVG+A +D+ TG
Sbjct: 124 NIVYCSITGFGQDGPRAEEPGYDFIIQGMSGLMSITGEPDDVTGGGAQKVGVAVVDIQTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AAL+ + TG+GQ ID +L QV+ L N G NYL +G +R G H ++V
Sbjct: 184 LYSTIAIQAALIARSHTGRGQYIDMSLFDVQVAALANQGMNYLASGKAPQRMGNQHPSIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYL 488
P+Q FK + I G+DKQ++D+C + L + +++
Sbjct: 244 PYQTFKAKDKEFIIACGNDKQFKDLCIAIGYPELLENDKFV 284
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 2/139 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L + +++ RV+ R +L + ++KT +EW+ + + P +N
Sbjct: 268 LCIAIGYPELLENDKFVRNQDRVKYRNVLIPLLSEHFLQKTAKEWVDMIHALKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI A+ I LV I H + + +G + S T E PP LGEHT +L
Sbjct: 328 SIEDALAEPQIVHRNLVVNIPHRLNENFQTIGSPIKLSDTPVEYHHAPPELGEHTAQILS 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+E +A LKEK I+
Sbjct: 388 RFKTAEE--LAALKEKGII 404
>gi|395006669|ref|ZP_10390475.1| putative acyl-CoA transferase/carnitine dehydratase [Acidovorax sp.
CF316]
gi|394315369|gb|EJE52177.1| putative acyl-CoA transferase/carnitine dehydratase [Acidovorax sp.
CF316]
Length = 417
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 132/301 (43%), Positives = 192/301 (63%), Gaps = 9/301 (2%)
Query: 210 SENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL---- 265
S P L +++LDL+R++AGP+CT +LADLGA+V+KVE+P GD+ R WGPPFL
Sbjct: 2 STPPVGALDGIKVLDLSRVLAGPWCTQILADLGADVVKVERPGAGDDTRHWGPPFLKDAQ 61
Query: 266 -NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYK 324
N+T ++YFT NRNK+SV +D TPEGQQ+I+D+A Q D++VENF G L + L +
Sbjct: 62 GNDTTQASYFTACNRNKRSVTIDMATPEGQQLIRDMALQSDIVVENFKVGGLKQYGLDHA 121
Query: 325 HLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIA 380
L +N +L+YCSVTGFG GPY +R GYD++ ++ G++ ITG P G P +VG+A
Sbjct: 122 SLRALNPRLVYCSVTGFGQDGPYAERAGYDLMIQAMTGMMSITGRGDAEPGGGPLRVGVA 181
Query: 381 SIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWG 440
DL TG+YA A++AAL +++TG+GQ ID +LL +++L N A +L G R G
Sbjct: 182 LTDLFTGVYASTAIVAALNVRHRTGEGQHIDMSLLDVGMAILANQAAGFLATGNAPTRQG 241
Query: 441 TSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHL 500
SH ++ P+Q F T +G + + G+D Q+ C A D R+ + L + + L
Sbjct: 242 NSHPSLAPYQDFPTQDGAMLLAIGNDGQFARFCAAAGQPQWASDERFASNTLRVKHRAEL 301
Query: 501 I 501
I
Sbjct: 302 I 302
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 70/146 (47%), Gaps = 8/146 (5%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C A D R+ + LRV++R L +EA T +TT +W+ + + + P +N
Sbjct: 273 FCAAAGQPQWASDERFASNTLRVKHRAELIPAMEALTRTRTTADWIALLEDKAVPCGPIN 332
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGD-------IKIVGPAVAYSLTQPEVRTPPPALGE 113
+I+Q F D ++ L + K G+ I V + S P +R PPALG+
Sbjct: 333 TIAQAFDDAQVKARGLAVALPRWKDGEAGDGVAHITGVASPLRLSANPPTLRNAPPALGQ 392
Query: 114 HTDYVLKDLLNYDETTIAKLKEKKIL 139
HTD VL + L D IA+L+ +L
Sbjct: 393 HTDEVLTE-LGLDAARIAQLRAAGVL 417
>gi|424904101|ref|ZP_18327611.1| CAIB/BAIF family protein [Burkholderia thailandensis MSMB43]
gi|390930079|gb|EIP87481.1| CAIB/BAIF family protein [Burkholderia thailandensis MSMB43]
Length = 392
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 128/271 (47%), Positives = 178/271 (65%), Gaps = 9/271 (3%)
Query: 228 IIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELSTYFTCVNRNKK 282
++AGP+C LADLGA+VIKVE+P GD+ R WGPP+L +T + Y+ NRNK+
Sbjct: 1 MLAGPWCAQTLADLGADVIKVERPELGDDTRHWGPPYLKTPDGADTREAAYYLAANRNKR 60
Query: 283 SVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFG 342
SV VD TPEGQ+I+++LA QCDV++EN+ G+L + L Y L+ + L+YCSVTGFG
Sbjct: 61 SVTVDIATPEGQRIVRELAAQCDVVLENYKVGQLAKYGLDYASLAAVKPGLVYCSVTGFG 120
Query: 343 SKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATGLYAHGAVMAAL 398
GPY R GYD I +GG + ITG P G P K G+A DLATGLY+ A++AAL
Sbjct: 121 QTGPYAHRAGYDFIIQGMGGFMSITGERYGLPGGGPQKAGVAIADLATGLYSTIAILAAL 180
Query: 399 LHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNGY 458
H+ +TG+GQ ID LL QV++L N+ N+L +G RWG +H N+VP+Q F+TS+G+
Sbjct: 181 AHRDRTGEGQHIDMALLDVQVALLANMNTNFLASGKPPVRWGNAHPNIVPYQTFETSDGW 240
Query: 459 VTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+ + G+D Q++ + LA D R+ T
Sbjct: 241 IIVAVGNDGQFRKFVEAGGRAALADDARFAT 271
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 73/130 (56%)
Query: 10 LALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADE 69
LA D R+ T RV +R+ L I T +T EWL + + P +N +++VF DE
Sbjct: 263 LADDARFATNPARVRHRDTLVPIIAEMTKTRTKREWLDALEALGVPCGPINDLAEVFDDE 322
Query: 70 HIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETT 129
++ + E+ H +K+V + S T P+ R+ PP LGEHT+ VL+D+L Y +
Sbjct: 323 QVRARGMQVELPHPSGATVKLVRNPIRMSETPPDARSAPPLLGEHTEAVLRDMLGYGDAA 382
Query: 130 IAKLKEKKIL 139
IA L++K+I+
Sbjct: 383 IAALRDKRIV 392
>gi|425744451|ref|ZP_18862508.1| CoA-transferase family III protein [Acinetobacter baumannii WC-323]
gi|425490964|gb|EKU57255.1| CoA-transferase family III protein [Acinetobacter baumannii WC-323]
Length = 406
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 128/280 (45%), Positives = 181/280 (64%), Gaps = 9/280 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
L+ +R+LDL+R++AGP+C+ +LADLGAEVIK+E+P TGD+ R WGPP++ + T +
Sbjct: 4 LTGLRVLDLSRVLAGPWCSQILADLGAEVIKIERPQTGDDTRMWGPPWMKDDAGQPTREA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK SV +D + +GQ +++++ K DVL+EN+ G L + L Y L EIN
Sbjct: 64 GYYQSANRNKYSVTIDLASKQGQALLREMVKDSDVLIENYKVGSLHKYGLDYASLREINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCS+TGFG GP PGYD + + GL+ ITG P G P KVG+A DL TG
Sbjct: 124 GLVYCSITGFGQTGPRASEPGYDFVIQGMAGLMSITGEKDDLPGGGPQKVGVAVTDLQTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA A+ AAL + +TGKGQ ID +LL QV+ L N G NYL G +RWG +HAN+V
Sbjct: 184 LYATIAIQAALWARQRTGKGQHIDLSLLDVQVAGLANHGMNYLITGQAPQRWGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
P+Q FK + I G+D Q++ +C+ + A+ P++
Sbjct: 244 PYQTFKAKDKDFIIACGNDAQFKALCQAIGQAEWAVHPKF 283
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 67/140 (47%), Gaps = 2/140 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + A+ P++ R+ +R L ++ + ++ + W+ V P +N
Sbjct: 268 LCQAIGQAEWAVHPKFRLNQDRIAHRGELTTLMDQHFLTQSAQYWVERIHAVKVPVGMIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ + + +Q ++V I H +Y K++ + S T E R PP LGEHT VL
Sbjct: 328 NVEEALQEPQVQAREMVVSIPHPQYRQFKMIASPLKLSATPVEYRLAPPRLGEHTQQVLA 387
Query: 121 DLLNYDETTIAKLKEKKILG 140
+ + +A+L E+ ++G
Sbjct: 388 QYCSTEH--LAELTEQGVIG 405
>gi|281201665|gb|EFA75873.1| CoA-transferase family III protein [Polysphondylium pallidum PN500]
Length = 422
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 128/290 (44%), Positives = 194/290 (66%), Gaps = 6/290 (2%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE---LST 272
PL ++LDL+R++AGP+ + LL DLGA+VIKVE + GD+ R+WGPPF + + +
Sbjct: 36 PLEGFKVLDLSRVLAGPWSSQLLGDLGADVIKVES-IQGDDTREWGPPFYKDPKGNINTA 94
Query: 273 YFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQ 332
YF+C NRNKKS+ VDF PEGQ+II +L+K+CDVL+ENF G L++ NL YK +S IN +
Sbjct: 95 YFSCTNRNKKSIAVDFSKPEGQKIIHELSKECDVLLENFKVGGLEKYNLDYKSISSINPR 154
Query: 333 LIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHG 392
+IYCS+TGFG GP+ + PGYD ++GGL+ ITG + P K G+A +D+ TG+Y++
Sbjct: 155 IIYCSITGFGQNGPFANLPGYDFAIQAMGGLMSITG-TESEPMKCGVAIVDMMTGMYSNV 213
Query: 393 AVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVF 452
A+ AAL + +T +GQ ID +LL Q + L N +NYL G+ KR G SH ++ P+
Sbjct: 214 AIQAALHLRNQTNRGQHIDVSLLDVQATFLANQASNYLVTGVNPKRIGNSHPSISPYDSL 273
Query: 453 KTSNGYVTIGTGSDKQYQDMCKVMNL-QHLALDPRYLTGALILAMTSHLI 501
K+S+G+ + G+D Q+ +C + + + ++ D R+ + A +A L+
Sbjct: 274 KSSDGFYVVAVGNDSQFHSLCNTLGVDRSISGDARFSSNAKRVANRQELL 323
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 1 MCKVMNL-QHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQV 59
+C + + + ++ D R+ + A RV NR+ L + + A++M +TT+EW+ + + P + +
Sbjct: 293 LCNTLGVDRSISGDARFSSNAKRVANRQELLEHLNARSMMRTTKEWIDLLGKANVPCSPI 352
Query: 60 NSISQVFADEHIQDIKLVKEI 80
N +S+V++ IQ +V E+
Sbjct: 353 NQLSEVYSHPQIQHRNMVWEL 373
>gi|358379759|gb|EHK17438.1| hypothetical protein TRIVIDRAFT_57321 [Trichoderma virens Gv29-8]
Length = 451
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 133/303 (43%), Positives = 190/303 (62%), Gaps = 9/303 (2%)
Query: 207 ALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL- 265
A + LPL R+LD+TR++AGP+CT +L DLGAEVIK+E P GD+ R WGPP+
Sbjct: 38 AAAVSGAPLPLEGYRVLDMTRVLAGPYCTQILGDLGAEVIKIEHPTRGDDTRAWGPPYAK 97
Query: 266 -------NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDR 318
S YF NRNKKS+ + F+ G I+ LA +CD+LVEN++PG L +
Sbjct: 98 YKPESGREGPGESAYFLGANRNKKSLGLSFQHQGGVDILHKLAAKCDILVENYLPGTLKK 157
Query: 319 LNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVG 378
++ Y+ L +IN LIY S+TG+G GPY +R GYD++ + GL+HITG DGPP KVG
Sbjct: 158 YSMDYETLRKINPGLIYASITGYGQTGPYSNRAGYDVMVEAEFGLMHITGSRDGPPVKVG 217
Query: 379 IASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAG-IEGK 437
+A DL TGLY ++MAALL + +TGKGQ ID L Q + L N+ ++ L +G +
Sbjct: 218 VAVTDLTTGLYTSNSIMAALLSRARTGKGQHIDVALSDCQTATLANIASSSLISGKKDSG 277
Query: 438 RWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMT 497
RWGT+H ++VP++ FKT +G + IG G+D+ + +C + H D ++ T A +A
Sbjct: 278 RWGTAHPSIVPYRAFKTKDGDILIGGGNDRLFGVLCDGIGKPHWKDDAKFKTNADRVAHR 337
Query: 498 SHL 500
+ L
Sbjct: 338 NEL 340
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 80/139 (57%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + H D ++ T A RV +R L EIEA T ++TT+EWL +F+G PYA +N
Sbjct: 312 LCDGIGKPHWKDDAKFKTNADRVAHRNELEAEIEAITQQRTTQEWLEVFEGSGMPYAAIN 371
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I H + +V EI HE G IK+V V +S TQP VRTPPP LG+HTD +L
Sbjct: 372 DIQGTLNHSHTKARDMVIEIDHEYCGPIKMVNTPVKWSETQPIVRTPPPVLGQHTDEILS 431
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ L E I LK++ ++
Sbjct: 432 EHLGLSEADITALKDQGVV 450
>gi|406040734|ref|ZP_11048089.1| L-carnitine dehydrogenase [Acinetobacter ursingii DSM 16037 = CIP
107286]
Length = 405
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 132/284 (46%), Positives = 185/284 (65%), Gaps = 9/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L R+LDL+R++AGP+C +LADLGAEVIKVE+P GD+ R WGPP++ +T +
Sbjct: 4 LEGFRVLDLSRVLAGPWCGQILADLGAEVIKVERPKRGDDTRAWGPPWMKDDEGRDTHEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK SV +D TPEGQ++++ LA + DV++EN+ G L + L Y+ LS++N
Sbjct: 64 AYYQSTNRNKLSVAIDIATPEGQEVVRALALESDVVIENYKTGSLKKYGLDYETLSKLNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+LIYCS+TGFG GP + PGYD I +GGL+ +TG P G P K+GIA D+ TG
Sbjct: 124 KLIYCSITGFGQTGPRAEEPGYDFIIQGMGGLMSVTGEKDDLPGGGPQKLGIAFSDITTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL++ TG GQ ID LL Q++ L N G NYL +G R+G +HAN+V
Sbjct: 184 LYSTIAIQAALLNRNITGLGQYIDMALLDVQIATLANQGMNYLASGKVPGRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P+QVFK + I G+D Q+ +C+ + L L DP++ A
Sbjct: 244 PYQVFKACDRDFIIACGNDTQFIQLCQAIGLPELPNDPKFTRNA 287
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + L L DP++ A R+++RE + + KT +EW+ P +N
Sbjct: 268 LCQAIGLPELPNDPKFTRNADRIKHREDITDLLSTHFASKTADEWVAAIHAAKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q F + + + K++ ++ H + +K++G + S T E + PP LG+HTD +L
Sbjct: 328 NLEQAFEEPQVVERKMLVDMPHPQRQHLKVIGSPIKMSRTPIEYKRAPPMLGQHTDEILS 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L+ ++T+ +LK K I+
Sbjct: 388 RILS--KSTLDELKSKGIV 404
>gi|359398786|ref|ZP_09191802.1| putative acyl-CoA transferase/carnitine dehydratase
[Novosphingobium pentaromativorans US6-1]
gi|357600024|gb|EHJ61727.1| putative acyl-CoA transferase/carnitine dehydratase
[Novosphingobium pentaromativorans US6-1]
Length = 409
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 130/277 (46%), Positives = 184/277 (66%), Gaps = 3/277 (1%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTY 273
S PL+ VR+LDL+R++AGP+CT LADLGAEV+KVE P GDE R W PP+ + +S Y
Sbjct: 19 SPPLAGVRVLDLSRVLAGPWCTQCLADLGAEVLKVESPGDGDETRTWAPPYAGD--MSAY 76
Query: 274 FTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQL 333
FTC NR+K S+ VD KT EG+ I LA Q DV++ENF G L+R+ LG + L IN +L
Sbjct: 77 FTCANRSKSSLVVDLKTQEGKDTILALAAQADVVIENFKTGSLERMGLGREDLRRINPRL 136
Query: 334 IYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGA 393
I+CS++G+G GP DR GYD + + GL+ ITG DGPP KVG+A D+ TGLYA A
Sbjct: 137 IHCSISGYGRSGPQPDRAGYDFVIQAESGLMSITGEADGPPVKVGVAVSDIITGLYASQA 196
Query: 394 VMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFK 453
++AAL+ + KTG+G+ +D L Q++ L N+ A+ L G +R+G +HA V P+QV
Sbjct: 197 ILAALVEQRKTGQGRFLDVALFDCQLAALANIQASVLATGQTPRRFGNAHATVGPYQVVD 256
Query: 454 TSNGYVTIGTGSDKQYQDMCK-VMNLQHLALDPRYLT 489
++G I G+ +Q+ C+ +++ +A D R+ T
Sbjct: 257 AADGPFVIALGNSRQFDVFCRQLLDRPDIAEDDRFRT 293
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%)
Query: 3 KVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSI 62
++++ +A D R+ T R+ NRE L I + ++++++EWL +F P V ++
Sbjct: 278 QLLDRPDIAEDDRFRTNGDRLTNREALNALIAPELLKRSSQEWLELFHRHGLPGGLVQTV 337
Query: 63 SQVFADEHIQDIKLVKEISHE 83
Q A E + LV + E
Sbjct: 338 DQALASEQVSGRGLVHRFNEE 358
>gi|393776701|ref|ZP_10364995.1| l-carnitine dehydratase bile acid-inducible protein f [Ralstonia
sp. PBA]
gi|392716058|gb|EIZ03638.1| l-carnitine dehydratase bile acid-inducible protein f [Ralstonia
sp. PBA]
Length = 382
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 129/279 (46%), Positives = 181/279 (64%), Gaps = 8/279 (2%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL----NNTELST 272
L +++LDL+RI+AGP+CT LADLGAEV K+E+P GD+ R WGPP+L + +S+
Sbjct: 6 LQGIKVLDLSRILAGPWCTQNLADLGAEVTKIERPEGGDDTRGWGPPYLESPDGSARMSS 65
Query: 273 YFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQ 332
YF C NR K+S+ +DF TPEG ++ LA + DVLVEN+ G L R L Y L +N +
Sbjct: 66 YFICCNRGKRSMTLDFSTPEGLATLRGLAAEADVLVENYKAGTLARYGLDYDTLRALNPR 125
Query: 333 LIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDG----PPCKVGIASIDLATGL 388
L+Y S+TGFG GP D+PGYD + +GGL+ TG PDG P + G+A ID+ TG+
Sbjct: 126 LVYVSITGFGQTGPMADKPGYDYVFQGMGGLMSYTGQPDGMPGAGPLRTGVAVIDVTTGM 185
Query: 389 YAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVP 448
YA AV+AAL ++ TG G +D LL V++ N GANYL +G +R G +H N P
Sbjct: 186 YATTAVLAALYQRHATGTGVYLDIALLDAAVALNANQGANYLISGKNPERSGNAHPNCAP 245
Query: 449 HQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
++VF+ ++GY+ + G+D Q+ C+V L+ LA D RY
Sbjct: 246 YEVFRCADGYLILAIGNDTQFARFCEVAGLEALAGDARY 284
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 5/117 (4%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V L+ LA D RY + R+EN L + +T + W F P+ +N
Sbjct: 269 FCEVAGLEALAGDARYALNSARIENLPALRAILAEVFPMRTRQAWTDAFDAAGVPWGPIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIV-GPAVAYSLTQPEVR-TPPPALGEHT 115
++ +VFA + +LV+ H G I +V P +A P+ R PPP LGE +
Sbjct: 329 TLEEVFAHPQVVHRRLVQHADHPILGRIPMVRNPMLA---DAPDARLEPPPLLGERS 382
>gi|58262974|ref|XP_568897.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57223547|gb|AAW41590.1| expressed protein [Cryptococcus neoformans var. neoformans JEC21]
Length = 450
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 129/288 (44%), Positives = 187/288 (64%), Gaps = 15/288 (5%)
Query: 212 NPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL------ 265
N PL+ ++++DLTRI+AGP TM+L +VIK+E P GD+ R W PP
Sbjct: 44 NDDRPLAGIKVVDLTRILAGPLATMMLV---TDVIKIESPKNGDDTRSWLPPSAPVPPEG 100
Query: 266 ----NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNL 321
+ S YF NRNK+S+ ++ K+ EGQ+IIK L ++ DVLVEN+VPGKL + L
Sbjct: 101 YPRPDLPPESAYFLQANRNKRSLTLNLKSAEGQKIIKKLIEKADVLVENYVPGKLKKFGL 160
Query: 322 GYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIAS 381
++ + E+N +LIYCS+TG+GS GPY PGYD++ + GL+HITG G P KVG+A
Sbjct: 161 SWEEVKEMNPRLIYCSITGYGSTGPYSQSPGYDVVIEAEAGLMHITGEKGGKPVKVGVAV 220
Query: 382 IDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGT 441
D+ TG +A ++AALL + KTGKG +++C+L +Q++ L N+GANYL AG E RWGT
Sbjct: 221 TDVLTGHHAQSGILAALLKRQKTGKGSRVECSLFESQIASLCNIGANYLIAGEEATRWGT 280
Query: 442 SHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCK--VMNLQHLALDPRY 487
SH ++VP+QVF T + ++ + G+D Q+ +C V+N D R+
Sbjct: 281 SHPSIVPYQVFPTKDSFIMLSAGNDSQFAILCSSAVLNKPDWLNDDRF 328
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 70/119 (58%)
Query: 4 VMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSIS 63
V+N D R+ + RVE+R+++ IE EKTTEEW G P+A +N+I+
Sbjct: 316 VLNKPDWLNDDRFSSNRKRVEHRDVMIALIEEVLSEKTTEEWCQKLVGKGLPFAPINNIA 375
Query: 64 QVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDL 122
Q F+ ++V+E+ H + G IK+ PAV Y ++P++ PPP LGEHT+ VL +L
Sbjct: 376 QTFSHPQAIAREVVEEVIHPRAGKIKLAAPAVTYDGSKPKLYRPPPYLGEHTEEVLTEL 434
>gi|134282694|ref|ZP_01769397.1| CAIB/BAIF family protein [Burkholderia pseudomallei 305]
gi|403518357|ref|YP_006652490.1| CAIB/BAIF family protein [Burkholderia pseudomallei BPC006]
gi|134245780|gb|EBA45871.1| CAIB/BAIF family protein [Burkholderia pseudomallei 305]
gi|403073999|gb|AFR15579.1| CAIB/BAIF family protein [Burkholderia pseudomallei BPC006]
Length = 392
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 129/271 (47%), Positives = 178/271 (65%), Gaps = 9/271 (3%)
Query: 228 IIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELSTYFTCVNRNKK 282
++AGP+C LADLGA+VIKVE+P GD+ R WGPP+L +T + Y+ NRNK+
Sbjct: 1 MLAGPWCAQTLADLGADVIKVERPECGDDTRHWGPPYLKTPDGADTREAAYYLAANRNKR 60
Query: 283 SVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFG 342
SV VD TPEGQ+II++LA QCDV++EN+ G+L + L Y L+ + L+YCSVTGFG
Sbjct: 61 SVTVDIATPEGQRIIRELAAQCDVVLENYKVGQLAKYGLDYASLAAVKPGLVYCSVTGFG 120
Query: 343 SKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATGLYAHGAVMAAL 398
GPY R GYD I +GG + ITG P G P K G+A DLATGLY+ A++AAL
Sbjct: 121 QTGPYAHRAGYDFIIQGMGGFMSITGERDGLPGGGPQKAGVAIADLATGLYSTIAILAAL 180
Query: 399 LHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNGY 458
H+ +TG+GQ ID LL QV++L N+ N+L +G RWG +H N+VP+Q F+TS+G+
Sbjct: 181 AHRDRTGEGQHIDMALLDVQVALLANMNTNFLASGKPPVRWGNAHPNIVPYQTFETSDGW 240
Query: 459 VTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+ + G+D Q++ + LA D R+ T
Sbjct: 241 IIVAVGNDGQFRKFVEAGGRPELADDERFAT 271
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 73/131 (55%)
Query: 9 HLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFAD 68
LA D R+ T RV +R+ L + A T +T EWL + + P +N +++VF D
Sbjct: 262 ELADDERFATNPARVRHRDTLVPIVAAMTKTRTKREWLDALEALGVPCGPINDLAEVFDD 321
Query: 69 EHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDET 128
E ++ + ++ H K+V + S T P+ R+ PP LGEHTD VL+DLL Y +
Sbjct: 322 EQVRARGMQVDLPHPSGASAKLVRNPIRMSATPPDARSAPPLLGEHTDAVLRDLLGYGDA 381
Query: 129 TIAKLKEKKIL 139
IA L++K+++
Sbjct: 382 AIAALRDKRVV 392
>gi|408415566|ref|YP_006626273.1| hypothetical protein BN118_1642 [Bordetella pertussis 18323]
gi|401777736|emb|CCJ63067.1| conserved hypothetical protein [Bordetella pertussis 18323]
Length = 407
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 134/282 (47%), Positives = 182/282 (64%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L ++++LDL RI+AGP+ T LAD+GAEV+KVE+P GD+ R WGPPFL N T S
Sbjct: 5 LGHIKVLDLIRILAGPWATQTLADMGAEVVKVERPRVGDDTRAWGPPFLKDSEGNETADS 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+YF NR KKS+ VD P+GQ +I+DLA DV+VEN+ G L R L Y+ L IN
Sbjct: 65 SYFLAANRGKKSITVDLAHPDGQALIRDLAATADVVVENYKVGTLARYGLDYESLKAINP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+L+YCS+TGFG GPY PGYD + +GGL+ ITG P+G P KVGIA DL TG
Sbjct: 125 RLVYCSITGFGQDGPYASLPGYDFVFQGMGGLMSITGQPEGTPGDEPMKVGIAISDLLTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA A++AAL ++ +G GQ +D +LL VS+ N+ +G +R G +H+N+V
Sbjct: 185 MYATTAILAALERRHVSGTGQHVDMSLLDCVVSISSYQAINHFLSGKIPRRMGNAHSNMV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+QVF+ G V + G+D QY+ +CK++ LA D RY T
Sbjct: 245 PYQVFRCKEGDVIVAVGNDGQYRALCKLIERDDLATDERYAT 286
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 63/136 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK++ LA D RY T R NR+ L EI + +T +EW+ + + + P +
Sbjct: 269 LCKLIERDDLATDERYATPGQRNRNRDTLIPEIAQAMLARTMQEWVALMEAANVPCGPIY 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q+F D H+Q + + H V + S T + P LGEHTD VL
Sbjct: 329 NMQQMFEDPHVQHRGMRLSLPHSAGVQAPAVASPIRLSDTPIQYGRSAPLLGEHTDSVLA 388
Query: 121 DLLNYDETTIAKLKEK 136
L IA+L+ +
Sbjct: 389 QRLGLAPARIAELRAR 404
>gi|226192899|ref|ZP_03788511.1| CAIB/BAIF family protein [Burkholderia pseudomallei Pakistan 9]
gi|225934989|gb|EEH30964.1| CAIB/BAIF family protein [Burkholderia pseudomallei Pakistan 9]
Length = 392
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 129/271 (47%), Positives = 178/271 (65%), Gaps = 9/271 (3%)
Query: 228 IIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELSTYFTCVNRNKK 282
++AGP+C LADLGA+VIKVE+P GD+ R WGPP+L +T + Y+ NRNK+
Sbjct: 1 MLAGPWCAQTLADLGADVIKVERPECGDDTRHWGPPYLKTPDGADTREAAYYLAANRNKR 60
Query: 283 SVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFG 342
SV VD TPEGQ+II++LA QCDV++EN+ G+L + L Y L+ + L+YCSVTGFG
Sbjct: 61 SVTVDIATPEGQRIIRELAAQCDVVLENYKVGQLAKYGLDYASLAAVKPGLVYCSVTGFG 120
Query: 343 SKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATGLYAHGAVMAAL 398
GPY R GYD I +GG + ITG P G P K G+A DLATGLY+ A++AAL
Sbjct: 121 QTGPYAHRAGYDFIIQGMGGFMSITGERDGLPGGGPQKAGVAIADLATGLYSTIAILAAL 180
Query: 399 LHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNGY 458
H+ +TG+GQ ID LL QV++L N+ N+L +G RWG +H N+VP+Q F+TS+G+
Sbjct: 181 AHRDRTGEGQHIDMALLDVQVALLANMNTNFLASGKPPVRWGNAHPNIVPYQTFETSDGW 240
Query: 459 VTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+ + G+D Q++ + LA D R+ T
Sbjct: 241 IIVAVGNDGQFRKFVEAGGRPELADDERFAT 271
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 73/131 (55%)
Query: 9 HLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFAD 68
LA D R+ T RV +R+ L + A T +T EWL + + P +N +++VF D
Sbjct: 262 ELADDERFATNPARVRHRDTLVPIVAAMTKTRTKREWLDALEALGVPCGPINDLAEVFDD 321
Query: 69 EHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDET 128
E ++ + ++ H K+V + S T P+ R+ PP LGEHTD VL+D+L Y +
Sbjct: 322 EQVRARGMQVDLPHPSGASAKLVRNPIRMSATPPDARSAPPLLGEHTDAVLRDMLGYGDA 381
Query: 129 TIAKLKEKKIL 139
IA L++K+++
Sbjct: 382 AIAALRDKRVV 392
>gi|212526908|ref|XP_002143611.1| CAIB/BAIF family enzyme [Talaromyces marneffei ATCC 18224]
gi|210073009|gb|EEA27096.1| CAIB/BAIF family enzyme [Talaromyces marneffei ATCC 18224]
Length = 448
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 129/283 (45%), Positives = 186/283 (65%), Gaps = 8/283 (2%)
Query: 215 LPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELS--- 271
LPL +R+LD+TR++AGP+CT +L DLGA+VIKVE P GD+ R WGPPF + S
Sbjct: 44 LPLEGIRVLDMTRVLAGPYCTQILGDLGADVIKVEHPQRGDDTRAWGPPFAKYQDPSKKG 103
Query: 272 ----TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLS 327
Y+ NRNKKS+ + F G +I+ L K+CDVLVEN++PG L + +GY+ LS
Sbjct: 104 PGESAYYLAANRNKKSIGLSFAHTSGVEILHKLVKECDVLVENYLPGSLKKYAMGYETLS 163
Query: 328 EINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATG 387
+IN +LIY S+TG+G GPY +R GYD++ + GL+HITG DGPP KVG+A DL TG
Sbjct: 164 KINPKLIYASITGYGQTGPYSNRAGYDVMVEAEMGLMHITGSRDGPPVKVGVAVTDLTTG 223
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAG-IEGKRWGTSHANV 446
LY A+MAA++ + +TGKGQ ID L QV+ L N+ ++ L +G + RWGT+H ++
Sbjct: 224 LYTSNAIMAAIIARGRTGKGQYIDACLSDCQVATLANLASSALISGEKDSGRWGTAHPSI 283
Query: 447 VPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
VP++ +KT +G + G G+D+ + + + D R++T
Sbjct: 284 VPYRSYKTLDGDILFGGGNDRLFGVLSDRLGHPEWKTDDRFVT 326
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 78/127 (61%)
Query: 13 DPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEHIQ 72
D R++T + RVENR + IE T KTT+EWL IF+G PYA VN I EH++
Sbjct: 321 DDRFVTNSNRVENRVEIDSLIEEITKTKTTQEWLDIFEGSGMPYAAVNDIQATLNHEHVR 380
Query: 73 DIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETTIAK 132
+V EI H + G +K+V + YS +P VRTPPP LG+HTD VL+ LL+Y +
Sbjct: 381 ARGMVTEIDHPECGPMKLVNTPIKYSHAKPGVRTPPPTLGQHTDEVLQGLLDYSADEVLS 440
Query: 133 LKEKKIL 139
LK++ ++
Sbjct: 441 LKKEGVI 447
>gi|239825999|ref|YP_002948623.1| L-carnitine dehydratase/bile acid-inducible protein F [Geobacillus
sp. WCH70]
gi|239806292|gb|ACS23357.1| L-carnitine dehydratase/bile acid-inducible protein F [Geobacillus
sp. WCH70]
Length = 387
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 134/273 (49%), Positives = 184/273 (67%), Gaps = 2/273 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L VRILD+TR++AGP+ TM+L DLGA+VIKVE P D+ R WGPPF N +S Y+T
Sbjct: 5 LDGVRILDMTRVLAGPYATMILGDLGADVIKVEAPGGSDDTRFWGPPFQNG--MSAYYTA 62
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
VNRNK+S+ V+ K +G+ II+ LAK DV++ NF G +++L L Y HLS INS+LIYC
Sbjct: 63 VNRNKRSITVNLKEEKGKNIIRHLAKTADVVIHNFKTGTMEKLGLDYDHLSSINSRLIYC 122
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S+TGFG GPY+ PGYD I ++ G + I G P KVG+A D+ TGLYA A+ A
Sbjct: 123 SITGFGETGPYRHLPGYDYIIQAMSGWMSINGTASSGPLKVGVAITDVFTGLYAAIAIQA 182
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
ALL + KTG+GQKID +L + +S L+NV ANYL +G G H N+VP+ ++ S+
Sbjct: 183 ALLAREKTGRGQKIDLSLFDSAISALVNVAANYLMSGNVPTPLGNEHPNIVPYSTYEASD 242
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
G + I G+D+Q+Q C +++ + DPR+ T
Sbjct: 243 GPIVIAVGNDRQFQAFCGLLSDPTIGTDPRFQT 275
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 62/124 (50%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C +++ + DPR+ T RV +RE L I + ++T EW + P V
Sbjct: 258 FCGLLSDPTIGTDPRFQTNPDRVAHREELNNRINEEVKKRTRAEWQRLLAEKGIPCGPVQ 317
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q+F +V + HEK G +++VG + S T+ R PPP GEH D +++
Sbjct: 318 NLEQLFQHPQTLARDMVITMKHEKVGSLQLVGSPLKLSDTKISYRLPPPLAGEHNDEIIR 377
Query: 121 DLLN 124
+++N
Sbjct: 378 EIMN 381
>gi|451936934|gb|AGF87244.1| CoA-transferase [uncultured organism]
Length = 407
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 140/294 (47%), Positives = 194/294 (65%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL----NNTE-LS 271
LS++R+LDL+R++AGP+ + LLADLGA+VIKVE+P +GD+ R WGPP+ +TE ++
Sbjct: 5 LSHLRVLDLSRVLAGPWASQLLADLGADVIKVEKPGSGDDTRTWGPPWWKGKDGDTETVA 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF C NRNK+S+ VD PEGQ++I+ LA++ DV++ENF G L R L Y LS N
Sbjct: 65 AYFLCANRNKRSLTVDLTRPEGQELIRRLAEEADVVIENFKVGALARYGLDYASLSARNP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
+L+YCS+TGFG GPY R GYD + +GGL+ ITG PD G P KVG+A D+ TG
Sbjct: 125 RLVYCSITGFGQTGPYAPRAGYDFLIQGMGGLMSITGRPDHEPGGGPMKVGVALTDILTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA A++AAL + ++G+GQ ID LL QV+ L N NYL G + R G +H N+V
Sbjct: 185 LYAANAILAALAWRERSGRGQHIDMALLDVQVACLANQALNYLTTGQDPPRLGNAHPNIV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G++ + G+D Q+ C + LA DPRY T +A + LI
Sbjct: 245 PYQDFPTADGWMILAIGNDGQFARFCAEAGVPELAADPRYATNPARVAHRAELI 298
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 70/139 (50%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C + LA DPRY T RV +R L ++ T + T+ W+ + P +N
Sbjct: 269 FCAEAGVPELAADPRYATNPARVAHRAELIPRLQELTRTRRTDAWIAALERAGVPCGPIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+S+VFAD ++ + + H + G++ V + S T P R PP LGEHT VL+
Sbjct: 329 PLSKVFADPQVRARGMALHLPHGQLGEVPQVANPMRLSATPPAYRRAPPLLGEHTAEVLR 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
++L DE +A L+ K ++
Sbjct: 389 EVLGMDEAEVAALRAKGVV 407
>gi|33592846|ref|NP_880490.1| hypothetical protein BP1779 [Bordetella pertussis Tohama I]
gi|384204145|ref|YP_005589884.1| hypothetical protein BPTD_1757 [Bordetella pertussis CS]
gi|33572494|emb|CAE42066.1| conserved hypothetical protein [Bordetella pertussis Tohama I]
gi|332382259|gb|AEE67106.1| hypothetical protein BPTD_1757 [Bordetella pertussis CS]
Length = 407
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 134/282 (47%), Positives = 182/282 (64%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L ++++LDLTRI+AGP+ T LAD+GAEV+KVE+P GD+ R WGPPFL N T S
Sbjct: 5 LGHIKVLDLTRILAGPWATQTLADMGAEVVKVERPRVGDDTRAWGPPFLKDSEGNETADS 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+YF NR KKS+ VD P+GQ +I+DLA DV+VEN+ G L R L Y+ L IN
Sbjct: 65 SYFLAANRGKKSITVDLAHPDGQALIRDLAATADVVVENYKVGTLARYGLDYESLKAINP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+L+YCS+TGFG GPY P YD + +GGL+ ITG P+G P KVGIA DL TG
Sbjct: 125 RLVYCSITGFGQDGPYASLPDYDFVFQGMGGLMSITGQPEGTPGDEPMKVGIAISDLLTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA A++AAL ++ +G GQ +D +LL VS+ N+ +G +R G +H+N+V
Sbjct: 185 MYATTAILAALERRHVSGTGQHVDMSLLDCVVSISSYQAINHFLSGKIPRRMGNAHSNMV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+QVF+ G V + G+D QY+ +CK++ LA D RY T
Sbjct: 245 PYQVFRCKEGDVIVAVGNDGQYRALCKLIERDDLATDERYAT 286
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 63/136 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK++ LA D RY T R NR+ L EI + +T +EW+ + + + P +
Sbjct: 269 LCKLIERDDLATDERYATPGQRNRNRDTLIPEIAQAMLARTMQEWVALMEAANVPCGPIY 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q+F D H+Q + + H V + S T + P LGEHTD VL
Sbjct: 329 NMQQMFEDPHVQHRGMRLSLPHSAGVQAPAVASPIRLSDTPIQYGRSAPLLGEHTDSVLA 388
Query: 121 DLLNYDETTIAKLKEK 136
L IA+L+ +
Sbjct: 389 QRLGLAPARIAELRAR 404
>gi|398812805|ref|ZP_10571519.1| putative acyl-CoA transferase/carnitine dehydratase [Variovorax sp.
CF313]
gi|398076519|gb|EJL67579.1| putative acyl-CoA transferase/carnitine dehydratase [Variovorax sp.
CF313]
Length = 401
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 127/280 (45%), Positives = 181/280 (64%), Gaps = 7/280 (2%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE---LSTY 273
L +++LDL+RI+AGP+CT LADLGAEV K+E P GD+ R WGPP++ + + LS Y
Sbjct: 6 LQGIKVLDLSRILAGPWCTQNLADLGAEVTKIEHPRGGDDTRGWGPPYVESADGERLSAY 65
Query: 274 FTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQL 333
F C NR K SV +DF PEG++ +K + + DVLVEN+ G L R L Y L E+N +L
Sbjct: 66 FICCNRGKASVAIDFAQPEGREALKTMIRDADVLVENYKAGSLARQGLDYASLRELNPRL 125
Query: 334 IYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDG----PPCKVGIASIDLATGLY 389
+Y S+TGFG GP +PGYD + +GGL+ TG PDG P + G+A +DL+TG+Y
Sbjct: 126 VYVSITGFGQSGPMASKPGYDYVFQGMGGLMSYTGQPDGMPGAGPLRTGVAVVDLSTGMY 185
Query: 390 AHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPH 449
A AV+AAL + +TG+GQ ID LL V++ N ANYL +G +R G +H N P+
Sbjct: 186 ATSAVLAALFQRERTGQGQYIDIALLDVAVALNANQAANYLASGRNPQRSGNAHPNCAPY 245
Query: 450 QVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+VF ++G++ + G+D Q++ C+V LA D R++T
Sbjct: 246 EVFACADGHLILAIGNDPQFRRFCEVAEQPALADDVRFVT 285
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 47/91 (51%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V LA D R++T + R+EN L + +++ W F P+ +N
Sbjct: 268 FCEVAEQPALADDVRFVTNSARIENLPALRVLLTELFPKRSRSSWSTAFDAAGVPWGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIV 91
++ +VFAD +Q ++V+ + H ++G ++ V
Sbjct: 328 TMEEVFADAQVQHRRIVQTLDHPEFGALRTV 358
>gi|149912473|ref|ZP_01901007.1| Putative acyl-CoA transferase/carnitine dehydratase [Roseobacter
sp. AzwK-3b]
gi|149812879|gb|EDM72705.1| Putative acyl-CoA transferase/carnitine dehydratase [Roseobacter
sp. AzwK-3b]
Length = 370
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 131/278 (47%), Positives = 176/278 (63%), Gaps = 3/278 (1%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL--NNTELS 271
S PL+ +++++L RI+AGP+ LADLGAEVIK+E P GD+ R+WGPPF+ + +
Sbjct: 2 SAPLAGLKVVELARILAGPWAGQTLADLGAEVIKIESPA-GDDTRQWGPPFIERDGDRSA 60
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NR K SV VDF+TPEGQ ++D+ + D+++ENF G L + L Y L+ IN
Sbjct: 61 AYFHSTNRGKASVAVDFRTPEGQAHLRDIIRDADIVIENFKVGGLAKYGLDYDSLAAINP 120
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
LIYCS+TGFG GPY R GYD I + GL+ ITG PDG P KVG+A D+ TG+YA
Sbjct: 121 GLIYCSITGFGQDGPYAHRAGYDYIIQGMSGLMSITGDPDGQPTKVGVAVTDVFTGVYAT 180
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A++AAL + TGKGQ ID LL VS+ N NYL+ G R G H N+ P+QV
Sbjct: 181 TAILAALHQRGATGKGQHIDMALLDVAVSITANQAMNYLSTGTPPGRLGNFHPNLSPYQV 240
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
F ++G++ I G+D Q+ C ++ LA DP Y T
Sbjct: 241 FDCADGFIIIAVGNDAQFTRFCALLGCPDLADDPDYAT 278
>gi|399909709|ref|ZP_10778261.1| putative CoA-transferase family III [Halomonas sp. KM-1]
Length = 407
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 137/284 (48%), Positives = 180/284 (63%), Gaps = 10/284 (3%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTEL 270
PL+ +R+LDL+R++AGP+CT +LAD+GAEVIK+E+PV+GD+ R WGPP+L N T
Sbjct: 4 PLTGLRVLDLSRVMAGPWCTQILADMGAEVIKIERPVSGDDTRHWGPPWLKDRDGNETRE 63
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
S Y+ NR K SV VD PEGQ +I++LA + D+LVENF G L R L Y + IN
Sbjct: 64 SAYYLSANRGKHSVTVDMSRPEGQSLIRELAAESDILVENFKSGGLARKGLDYATMEAIN 123
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPC----KVGIASIDLAT 386
LIYCS+TGFG GP GYD + + GGL+ ITG DG P +VG+A DL T
Sbjct: 124 PGLIYCSITGFGQTGPMAALAGYDYLIQAQGGLMSITGAADGEPGAGPQRVGMAVADLTT 183
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANV 446
G+ A A++ AL H++ TG+GQ ID LL QVS L N NY +G R G H N+
Sbjct: 184 GMNATIAILGALHHRHLTGEGQYIDMALLDVQVSWLANQAQNYFCSGTPPTRTGEYHPNL 243
Query: 447 VPHQVFKTSNGY-VTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
VP+Q F T++G V I G+D Q+Q C+ + LA DPR+ T
Sbjct: 244 VPYQPFPTADGEKVIIAIGNDGQFQRFCQAVGRPELAEDPRFAT 287
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 75/139 (53%), Gaps = 1/139 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+ + LA DPR+ T RV +R L K + T +T EW+ + ++ P +
Sbjct: 270 FCQAVGRPELAEDPRFATNPARVRHRLELVKIMVEITRSRTAAEWIALLGEIAVPCGPIQ 329
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+++QVF D ++ ++ E+ ++G + V + YS T+ E R PPALGE TD VL
Sbjct: 330 NVAQVFDDPQVKAREMQIEL-ESRHGPVPGVANPIKYSRTRLEYRKAPPALGEDTDAVLA 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
LL+ +A+L+++ ++
Sbjct: 389 RLLDKAPEEVAELRQRGVI 407
>gi|302895039|ref|XP_003046400.1| hypothetical protein NECHADRAFT_32911 [Nectria haematococca mpVI
77-13-4]
gi|256727327|gb|EEU40687.1| hypothetical protein NECHADRAFT_32911 [Nectria haematococca mpVI
77-13-4]
Length = 438
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 131/284 (46%), Positives = 187/284 (65%), Gaps = 7/284 (2%)
Query: 213 PSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL------N 266
P PL+ +R+LD++R++AGP+C +L DLGAEVIK+E P GD+ R WGPP+ +
Sbjct: 27 PRQPLTGLRVLDMSRVLAGPYCAQILGDLGAEVIKIEHPTRGDDTRAWGPPYAPYLDGRS 86
Query: 267 NTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHL 326
S Y+ VNRNKKS+ + FK G II L K DVLVEN++PG L + L Y+ L
Sbjct: 87 GQGESAYYLSVNRNKKSLALSFKEKAGVDIITKLVKNSDVLVENYLPGSLKKYGLDYESL 146
Query: 327 SEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLAT 386
++IN +LIY S+TG+G GPY DR GYD++ + GL+HITG DGPP KVG+A DL T
Sbjct: 147 AKINPKLIYASITGYGQTGPYSDRAGYDVMVEAEMGLMHITGPRDGPPVKVGVAVTDLTT 206
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAG-IEGKRWGTSHAN 445
GLYA +V+AA++ + ++G+GQ +D L QV+ L N+ + L G +G R+GTSH +
Sbjct: 207 GLYAVNSVLAAIIERGQSGQGQHLDVCLSDCQVATLSNMAQSVLVTGKRDGGRYGTSHPS 266
Query: 446 VVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
VVP++ F+TS+G + IG +D+ + +CK + A D R+ T
Sbjct: 267 VVPYRAFRTSDGDILIGGANDRLFGVLCKCLEKPEWASDERFST 310
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 85/146 (58%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK + A D R+ T + RV NRE+L K IE T KTT+EWL F+G PYA+VN
Sbjct: 293 LCKCLEKPEWASDERFSTNSSRVANREVLEKWIEDTTKSKTTQEWLDTFEGTGLPYAKVN 352
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ H++ +VKE+ H G +K++ V YS T P +RTPPP LG+HT VL
Sbjct: 353 DLKDTLDHPHVRARGMVKELDHPALGKLKVLNSPVQYSRTGPSIRTPPPLLGQHTKEVLA 412
Query: 121 DLLNYDETTIAKLKEKKILGLIERLT 146
++L D I +L+ +++ + + L+
Sbjct: 413 EVLGLDAAEIKQLEHDQVVSVNKGLS 438
>gi|94312721|ref|YP_585930.1| L-carnitine dehydratase/bile acid-inducible protein F [Cupriavidus
metallidurans CH34]
gi|93356573|gb|ABF10661.1| L-carnitine dehydratase/bile acid-inducible protein F
(CoA-transferase family) [Cupriavidus metallidurans
CH34]
Length = 407
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 138/289 (47%), Positives = 185/289 (64%), Gaps = 11/289 (3%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELS---- 271
PLS++R+LDLTR++AGP+CT LADLGAEVIKVE+P GDE R WGPP+L E S
Sbjct: 4 PLSHIRVLDLTRVLAGPWCTQNLADLGAEVIKVERPEVGDETRGWGPPWLPAAEESERRD 63
Query: 272 -TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
+Y+ NR KKS+ V+ + +GQ II+ LA DVLVEN+ G L R LGY L E N
Sbjct: 64 SSYYASANRGKKSITVNLASADGQAIIRRLAASADVLVENYKVGTLARYGLGYDDLREAN 123
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLAT 386
L+YCSVTGFG GPY+ PGYD + +GGL+ ITG P G P KVGIA D+ T
Sbjct: 124 PGLVYCSVTGFGQTGPYRHLPGYDFVFQGMGGLMSITGERDDLPGGGPQKVGIAVADITT 183
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANV 446
G+YA A+ AAL + ++G+GQ ID LL ++ N +YL +G KR G +HAN
Sbjct: 184 GMYASLAIAAALTWRERSGQGQHIDMALLDCMLAFNSNQAVSYLVSGKLPKRQGNAHANA 243
Query: 447 VPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY--LTGALI 493
VP+QVF + +G + + G+D Q+ C+ + LA+D R+ +TG ++
Sbjct: 244 VPYQVFDSLDGKLIVAVGNDSQFAAYCRAVGKPELAIDTRFAKVTGRIV 292
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 60/134 (44%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C+ + LA+D R+ R+ NRE+L + +T WL + P VN
Sbjct: 270 CRAVGKPELAIDTRFAKVTGRIVNREVLLPMLVDVMRTDSTASWLARLKAAGVPCGPVND 329
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
SQ F D ++ + ++ G + + +S T E PPALGEHTD VL +
Sbjct: 330 FSQTFEDPQVRHRGIRVDLPLPDGGICPSIASPMRFSATPLEHSAAPPALGEHTDTVLTE 389
Query: 122 LLNYDETTIAKLKE 135
L +++L+E
Sbjct: 390 CLGLLPAELSRLRE 403
>gi|296412807|ref|XP_002836111.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629917|emb|CAZ80302.1| unnamed protein product [Tuber melanosporum]
Length = 439
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 190/294 (64%), Gaps = 8/294 (2%)
Query: 203 SLDLALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGP 262
SL A+ LPL +R+LDLTR++AGP+CT +L DLGAEVIKVE P GD+ R WGP
Sbjct: 25 SLSEAVDQSKSKLPLKGLRVLDLTRVLAGPYCTQILGDLGAEVIKVEHPTRGDDTRAWGP 84
Query: 263 PFLNNTE----LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDR 318
P+ + + S YF VNRNKKS+ + FK P GQ I++ LAK D+LVEN++PG L +
Sbjct: 85 PYAPSKDGGKGESAYFLAVNRNKKSLGLSFKHPSGQYILQHLAKASDILVENYLPGTLKK 144
Query: 319 LNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVG 378
L Y L E+ LIY S+TG+G GPYKDR GYD++ + GL+HITG P+ PP KVG
Sbjct: 145 YALDYPTLHEMAPHLIYASLTGYGQTGPYKDRTGYDVMVEAEMGLMHITGEPERPPVKVG 204
Query: 379 IASIDLATGLYAHGAVMAALLHKYKTGK-GQKIDCNLLSTQVSMLINVGANYL--NAGIE 435
+A DL TGLY +++AA++ + G GQ ID L QV+ L N+ ++ L G E
Sbjct: 205 VAVTDLTTGLYCSNSILAAVIARAGNGGVGQWIDVALSDCQVATLANIASSALISGKGDE 264
Query: 436 GKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
G R+GT+H ++VP++ F T++G + +G G+D+ Y +C+ + DPR+ T
Sbjct: 265 G-RFGTAHPSIVPYESFPTADGNILLGGGNDRLYAILCQKIGKPEWITDPRFAT 317
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 76/139 (54%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + DPR+ T RV+NR++L + T KTT+EWL IF PYA VN
Sbjct: 300 LCQKIGKPEWITDPRFATNEERVKNRKILVPMMVEITRSKTTQEWLEIFDSSGIPYAAVN 359
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I + H+ +VK + H GDIK+V V YS + P +RTPPP LG+HTD VL
Sbjct: 360 DIQATLSHSHVIARDMVKTVHHPTCGDIKLVNTPVKYSDSTPGIRTPPPTLGQHTDEVLM 419
Query: 121 DLLNYDETTIAKLKEKKIL 139
DLL + +L+ ++
Sbjct: 420 DLLGLSSYAVEELRRDGVV 438
>gi|398997253|ref|ZP_10700081.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM21]
gi|398124348|gb|EJM13860.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM21]
Length = 406
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 135/294 (45%), Positives = 185/294 (62%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+R++AGP+ +LADLGAEVIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHLRVLDLSRVLAGPWAGQILADLGAEVIKVERPGNGDDTRAWGPPFLKDAYGENTSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+SV +DF EGQ+++++LA + D+L+ENF G L L Y+ L +N
Sbjct: 64 AYYLSANRNKQSVTIDFTRAEGQKLVRELAAKSDILIENFKVGGLAAYGLDYESLKAVNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
LIYCS+TGFG GPY R GYD + +GGL+ +TG P+G P KVG+A D+ TG
Sbjct: 124 NLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPEGDEGAGPVKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ G GQ ID LL QV+ L N NYL G KR G +H N+V
Sbjct: 184 LYSTVAILAALAHRDHDGGGQHIDMALLDVQVACLANQAMNYLTTGNAPKRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F T++G + G+D Q++ +V A DPR+ T L + + LI
Sbjct: 244 PYQDFPTADGDFILTVGNDGQFRKFAEVAGQPQWADDPRFATNKLRVTNRAVLI 297
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 68/139 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+V A DPR+ T LRV NR +L I T+ KTT EW+L + P +N
Sbjct: 268 FAEVAGQPQWADDPRFATNKLRVTNRAVLIPLIRQATVFKTTAEWVLQLEQAGVPCGPIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++Q+FAD ++ L E+ H G + V + S T E R PP LGEHT VL+
Sbjct: 328 DLAQMFADPQVKARGLAIEMPHSLAGSVPQVASPIRLSKTPVEYRNAPPLLGEHTQEVLQ 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L +A KE +L
Sbjct: 388 RVLGLGAGAVAAFKESGVL 406
>gi|83858640|ref|ZP_00952162.1| L-carnitine dehydratase/bile acid-inducible protein F [Oceanicaulis
sp. HTCC2633]
gi|83853463|gb|EAP91315.1| L-carnitine dehydratase/bile acid-inducible protein F [Oceanicaulis
sp. HTCC2633]
Length = 402
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 124/276 (44%), Positives = 179/276 (64%), Gaps = 6/276 (2%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELS---- 271
PLS++++LDL+R++AGP+C +L DLGA+VIKVE P +GD+ R+WGPPFL + +
Sbjct: 5 PLSHIKVLDLSRVLAGPWCAQILGDLGADVIKVENPASGDDTRRWGPPFLKDESGAEADA 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ C NRNK+S+ V+ P+GQ I+K LA + DV++EN+ G L + L Y LS IN
Sbjct: 65 AYYLCANRNKRSIAVNITDPDGQAILKRLAAESDVVIENYKTGGLRKYGLDYDSLSAINP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
L+YCSVTGFG GP+ ++PGYD + ++GGL+ +TG + P KVG+ ++DL TG+YA
Sbjct: 125 DLVYCSVTGFGQTGPWSNQPGYDFLIQAMGGLMSVTG--EDAPMKVGVPAVDLFTGVYAA 182
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
GAVMAAL+ + GQ ID L Q +ML N ANY +G R G +H N+VP+Q
Sbjct: 183 GAVMAALIARSTGRGGQHIDMALFDVQAAMLANQAANYFVSGKPPGRAGNAHPNIVPYQD 242
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
F T++G + + G+D Q+Q + D R+
Sbjct: 243 FPTADGRLAVAVGNDGQFQAFASALGRPEWGADSRF 278
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 55/127 (43%)
Query: 13 DPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEHIQ 72
D R+ + RV NRE+L EI + T+ W+ P + + QVF+ E +
Sbjct: 275 DSRFRRNSDRVANREILVAEITLVLATRGTDHWIGALHEAGVPCGPILQLDQVFSHEQAR 334
Query: 73 DIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETTIAK 132
+L + GD ++ + T P+ PP EHT VL + L DE
Sbjct: 335 SRELAFTLPMTGIGDAPMIANPMRLLQTPPQYHRAPPRFAEHTQEVLHERLGVDENEFLA 394
Query: 133 LKEKKIL 139
L+E+ ++
Sbjct: 395 LQERSVV 401
>gi|424743085|ref|ZP_18171399.1| CoA-transferase family III protein [Acinetobacter baumannii WC-141]
gi|422943581|gb|EKU38596.1| CoA-transferase family III protein [Acinetobacter baumannii WC-141]
Length = 409
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 130/281 (46%), Positives = 182/281 (64%), Gaps = 9/281 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ N T S
Sbjct: 4 LQGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPRVGDDTRMWGPPWMPDQDGNMTRES 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF C NRNK SV VD TPEGQ +I ++AK DV++EN+ G L + L Y LS +N
Sbjct: 64 GYFQCTNRNKYSVAVDITTPEGQALIYEIAKTADVVIENYKTGSLVKYGLDYASLSALNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
++YCS+TGFG GP + PGYD I + GL+ ITG PD G KVG+A +D+ TG
Sbjct: 124 NIVYCSITGFGQDGPRAEEPGYDFIIQGMSGLMSITGEPDDVTGGGAQKVGVAVVDIQTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AAL+ + TG+GQ ID +LL QV+ L N G NYL +G +R G H ++V
Sbjct: 184 LYSTIAIQAALIARSHTGRGQYIDMSLLDVQVAALANQGMNYLASGKAPQRMGNQHPSIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYL 488
P+Q FK + I G+DKQ++D+C ++ L + +++
Sbjct: 244 PYQTFKAKDKEFIIACGNDKQFKDLCVAISYPELLENEKFV 284
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 2/139 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ L + +++ RV+ R+ L + ++KT +EW+ + P +N
Sbjct: 268 LCVAISYPELLENEKFVRNQDRVKYRDELIPLLSKHFLQKTAKEWVERIHALKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI + I LV I H + + +G + S T E PP LGEHT +L
Sbjct: 328 SIEDALVEPQIVHRNLVVNIPHRLNENFQTIGSPIKLSDTPVEYHHAPPELGEHTAQILS 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+E + LKEK I+
Sbjct: 388 RFKTAEELIV--LKEKGII 404
>gi|347014741|gb|ACC69030.2| putative acyl-CoA-transferase/carnithin dehydratase [Variovorax
paradoxus]
Length = 398
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 128/287 (44%), Positives = 182/287 (63%), Gaps = 6/287 (2%)
Query: 208 LSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN 267
+S+ PS L+ +++LDL+RI+AGP T LL DLGA+V+KVE+P GD+ RKWGPP++N+
Sbjct: 1 MSNTIPS-ALAGLKVLDLSRILAGPSATQLLGDLGADVVKVERPEEGDDTRKWGPPYVND 59
Query: 268 -----TELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLG 322
T S Y+ NRNK+S+ +D + G + + L + D+LVEN+ G L + L
Sbjct: 60 ADGRETHESAYYLSANRNKRSIAIDIASASGIETVHKLLEHADILVENYKAGGLAKYGLS 119
Query: 323 YKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASI 382
Y L LIYCS+TGFG GPY RPGYD + +GG++ +TG PDG P K G+
Sbjct: 120 YDQLKSRYPTLIYCSITGFGHTGPYASRPGYDFLIQGMGGIMSLTGEPDGQPMKTGVGIA 179
Query: 383 DLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTS 442
D+ TG+YA ++AAL H+ TG+GQ ID +LL TQ++ L+N G NYL + +R G
Sbjct: 180 DVMTGMYAAVGILAALQHRNVTGQGQHIDISLLDTQIAWLVNAGTNYLTDRVVPERLGNG 239
Query: 443 HANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
H N+VP+QVF T++ + + G+D Q+ C+V LQ L D RY T
Sbjct: 240 HPNIVPYQVFSTADSPMILAVGNDAQFAHFCEVAGLQELVTDERYAT 286
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V LQ L D RY T R+ NR+ +C I+ + WL + V P VN
Sbjct: 269 FCEVAGLQELVTDERYATNPKRILNRDAVCAVIDERLRTHPRAHWLRELEAVGVPCGPVN 328
Query: 61 SISQVFADEHI--QDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
++ +VF D H+ + +L + G+I ++ + S T P R PPP L EH D V
Sbjct: 329 NLEEVFNDPHVRARGAELRMPCEWAEGGEIGLLANPLKMSQTPPTYRRPPPRLNEHADDV 388
Query: 119 LKDLL 123
+ D L
Sbjct: 389 IADWL 393
>gi|209964823|ref|YP_002297738.1| CaiB [Rhodospirillum centenum SW]
gi|209958289|gb|ACI98925.1| CaiB [Rhodospirillum centenum SW]
Length = 413
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 124/279 (44%), Positives = 177/279 (63%), Gaps = 5/279 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TEL 270
PL+ VR+LD++R++AGP CT +L DLGA+V+KVE+P GD+ R+WGPP+L + T
Sbjct: 13 PLAGVRVLDMSRVLAGPSCTQILGDLGADVVKVEKPGQGDDTRRWGPPYLEDADGAPTGE 72
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
S+Y+ NRNK+S+ +DF PEGQ + + L DVLVEN+ G L R LGY L
Sbjct: 73 SSYYLSANRNKRSLTLDFTKPEGQALARRLVGHADVLVENYRTGTLARYGLGYDDLHIAY 132
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYA 390
+L+YCS+TGFG GPY R GYD + +GG++ +TG P G P K G+A DL G YA
Sbjct: 133 PRLVYCSITGFGQTGPYATRAGYDFMVQGMGGIMSLTGEPGGQPMKTGVAIADLMAGTYA 192
Query: 391 HGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQ 450
++AAL H+ +G+GQ +D LL TQV+ L N G +L +G R G H +VP+Q
Sbjct: 193 AIGILAALRHRDLSGRGQHLDMALLDTQVAWLSNAGQYFLTSGTPVPRTGNGHPTIVPYQ 252
Query: 451 VFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
F+ ++G++ + G+D+Q++ C LA DPR+ T
Sbjct: 253 TFEAADGWIILAVGNDEQFRRFCTFAGRPELADDPRFAT 291
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 1/140 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C LA DPR+ T RV NRE E+ A + WL + + P +N
Sbjct: 274 FCTFAGRPELADDPRFATNPARVGNREATVAEVAALIRRQPAAHWLEGLERLGVPCGPIN 333
Query: 61 SISQVFADEHIQDIKLVKEISHEKYG-DIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVL 119
I VFAD +Q + + H+ G + ++G V S T R PP LG+HT+ VL
Sbjct: 334 DIPAVFADPQVQARGMRVSLEHDAAGRPVDLIGSPVRLSETPVNYRYAPPTLGQHTEAVL 393
Query: 120 KDLLNYDETTIAKLKEKKIL 139
D L+ +A+L++ ++
Sbjct: 394 SDWLHMQPDEVARLRQTGVI 413
>gi|430810043|ref|ZP_19437158.1| L-carnitine dehydratase/bile acid-inducible protein F [Cupriavidus
sp. HMR-1]
gi|429497511|gb|EKZ96042.1| L-carnitine dehydratase/bile acid-inducible protein F [Cupriavidus
sp. HMR-1]
Length = 407
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 138/289 (47%), Positives = 185/289 (64%), Gaps = 11/289 (3%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELS---- 271
PLS++R+LDLTR++AGP+CT LADLGAEVIKVE+P GDE R WGPP+L E S
Sbjct: 4 PLSHIRVLDLTRVLAGPWCTQNLADLGAEVIKVERPEVGDETRGWGPPWLPAAEESERRD 63
Query: 272 -TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
+Y+ NR KKS+ V+ + +GQ II+ LA DVLVEN+ G L R LGY L E N
Sbjct: 64 SSYYASANRGKKSITVNLASTDGQAIIRRLAASADVLVENYKVGTLARYGLGYDDLRETN 123
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLAT 386
L+YCSVTGFG GPY+ PGYD + +GGL+ ITG P G P KVGIA D+ T
Sbjct: 124 PGLVYCSVTGFGQTGPYRHLPGYDFVFQGMGGLMSITGERDDLPGGGPQKVGIAVADITT 183
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANV 446
G+YA A+ AAL + ++G+GQ ID LL ++ N +YL +G KR G +HAN
Sbjct: 184 GMYASLAIAAALTWRERSGQGQHIDMALLDCMLAFNSNQAVSYLVSGKLPKRQGNAHANA 243
Query: 447 VPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY--LTGALI 493
VP+QVF + +G + + G+D Q+ C+ + LA+D R+ +TG ++
Sbjct: 244 VPYQVFDSLDGKLIVAVGNDSQFAAYCRAVGKPELAIDTRFAKVTGRIV 292
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 60/134 (44%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C+ + LA+D R+ R+ NRE+L + +T WL + P VN
Sbjct: 270 CRAVGKPELAIDTRFAKVTGRIVNREVLLPMLVDVMRTDSTASWLARLKAAGVPCGPVND 329
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
SQ F D ++ + ++ G + + +S T E PPALGEHTD VL +
Sbjct: 330 FSQTFEDPQVRHRGIRVDLPLPDGGVCPSIASPMRFSATPLEHSAAPPALGEHTDTVLTE 389
Query: 122 LLNYDETTIAKLKE 135
L +++L+E
Sbjct: 390 CLGLLPAELSRLRE 403
>gi|86137348|ref|ZP_01055925.1| CAIB/BAIF family protein [Roseobacter sp. MED193]
gi|85825683|gb|EAQ45881.1| CAIB/BAIF family protein [Roseobacter sp. MED193]
Length = 409
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 131/290 (45%), Positives = 188/290 (64%), Gaps = 6/290 (2%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTG-DECRKWGPPFLNN-----TEL 270
L ++++LDL+RI+AGP CT LL DLGA V+KVE P TG D+ R+WGPP++ + ++L
Sbjct: 22 LKDIKVLDLSRILAGPTCTQLLGDLGAIVVKVENPKTGGDDTRQWGPPYVTDADGERSDL 81
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
S YF NRNK+S+ +D + EGQ I+ LA + D+LVENF PG L + L Y L
Sbjct: 82 SAYFMAANRNKRSIALDITSAEGQAQIRRLAAEADILVENFKPGGLAKYGLDYASLRAEF 141
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYA 390
QLIYCS++G+G GP +PGYD++A GGL+ +TG P+G P K G+ D+ G+YA
Sbjct: 142 PQLIYCSISGYGQTGPNSSKPGYDLMAQGYGGLMSLTGEPEGQPVKAGVGIADVMCGMYA 201
Query: 391 HGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQ 450
V+AAL HK TG+GQ+ID L+ QV+ LIN G YLN G +R G H ++VP+
Sbjct: 202 TIGVLAALHHKTLTGEGQQIDLALVDAQVAWLINEGVAYLNTGEVPQRRGNEHPSIVPYG 261
Query: 451 VFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHL 500
+++TS+ +V + G+D Q++ + + L+ LA DPR+ T LA + L
Sbjct: 262 LYQTSDAHVILAVGNDSQFRRFMEFLGLEGLAEDPRFATNPARLAYRAAL 311
>gi|410422129|ref|YP_006902578.1| CaiB/BaiF family protein [Bordetella bronchiseptica MO149]
gi|408449424|emb|CCJ61115.1| CaiB/BaiF family protein [Bordetella bronchiseptica MO149]
Length = 402
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 126/286 (44%), Positives = 181/286 (63%), Gaps = 2/286 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL +R+LDLTR+++GPFCTMLL DLGAEVIK+E+PV GD+ R +GPPF S YF
Sbjct: 3 PLHGIRVLDLTRVVSGPFCTMLLGDLGAEVIKIEEPVHGDDSRAFGPPFSGGE--SAYFL 60
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNK+S +D K PEG+++++ LA+ DV+++NF PG ++RL LGY L N +L+
Sbjct: 61 SVNRNKRSCAIDLKQPEGKELLRALARASDVVIDNFRPGTMERLGLGYDALRAANPRLVS 120
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TGFG GP RPGYD+I G++ ITG P G P K+G + DL TG +A A+
Sbjct: 121 CSITGFGDSGPDAQRPGYDLIIQGESGIMDITGDPAGLPTKIGTSIADLITGQFASQAIT 180
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
AALL + +G+G+ + +L S+L Y G R G +H + P++ F+ +
Sbjct: 181 AALLERASSGQGRHVGIAMLDCMASLLTFNAGIYFTTGASPTRRGNAHPTIAPYETFQAA 240
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
+G++ IG +DK +Q C V+ LA DPRY A +A+ + L+
Sbjct: 241 DGWLNIGVANDKFWQLFCGVIARPDLADDPRYARAADRVALRAELV 286
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 55/139 (39%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C V+ LA DPRY A RV R L I A K W+ + P +
Sbjct: 257 FCGVIARPDLADDPRYARAADRVALRAELVPRIAALIAAKPRAYWIAALREAGVPCGDIR 316
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
S+++V E + +V ++ H G ++ + + PP LGEHT +L
Sbjct: 317 SVAEVCEAEQLVSRGMVFDMPHPSAGQVRNIASPFRFDGAGTAAHRAPPLLGEHTAAILC 376
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ +A L + I+
Sbjct: 377 EHAGLRPERVADLAARGII 395
>gi|224826998|ref|ZP_03700096.1| L-carnitine dehydratase/bile acid-inducible protein F
[Pseudogulbenkiania ferrooxidans 2002]
gi|224600831|gb|EEG07016.1| L-carnitine dehydratase/bile acid-inducible protein F
[Pseudogulbenkiania ferrooxidans 2002]
Length = 397
Score = 274 bits (701), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 134/274 (48%), Positives = 182/274 (66%), Gaps = 2/274 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
LS ++LDLTR++AGP+ LLADLGAEVIKVE+P GD+ R+W PP L + + YF C
Sbjct: 5 LSGFKVLDLTRVLAGPWTGQLLADLGAEVIKVERPGQGDDTRQWAPPSLPDGT-AAYFLC 63
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
NR K+SV VD PEGQ I++ LA++ DVL+EN+ G L + L Y L +N +L+YC
Sbjct: 64 ANRGKRSVTVDITRPEGQAIVRRLAEEADVLLENYKVGGLKKYGLDYDSLKSLNPRLVYC 123
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S+TGFG GPY + PGYD I + GL+ ITG DG P KVG+A DL TGLYA AV A
Sbjct: 124 SITGFGQDGPYAELPGYDYIVQGMSGLMSITGPADGEPHKVGVAVTDLFTGLYAANAVQA 183
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS- 455
ALL + +TG+GQ ID L ++ML NV N+L R G +H N+VP+QVFKT+
Sbjct: 184 ALLARSRTGQGQYIDMALFDCSLAMLANVNMNWLVGRTVPPRLGNAHPNIVPYQVFKTAG 243
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+G+ + G+DKQ++ +C+++ LA D R+ +
Sbjct: 244 DGHFILACGNDKQFRAVCQLIGQPQLADDERFAS 277
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 1/139 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+++ LA D R+ + RV+ RE L + ++ +EWL P +N
Sbjct: 260 VCQLIGQPQLADDERFASNPARVQYREQLVPMLAEAFRARSRDEWLKALDEAGVPCGPIN 319
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++++ FAD I+ + + D+ +VG + S T E PP LG TD VL
Sbjct: 320 NVAEAFADPQIRHRGMEIHLEDSVGQDVPLVGCPIKLSGTPVEYHRAPPKLGADTDEVLG 379
Query: 121 DLLNYDETTIAKLKEKKIL 139
L YD I +L + I+
Sbjct: 380 -ALGYDGEAIVQLHQSGII 397
>gi|427820152|ref|ZP_18987215.1| CaiB/BaiF family protein [Bordetella bronchiseptica D445]
gi|427822741|ref|ZP_18989803.1| CaiB/BaiF family protein [Bordetella bronchiseptica Bbr77]
gi|410571152|emb|CCN19367.1| CaiB/BaiF family protein [Bordetella bronchiseptica D445]
gi|410588006|emb|CCN03058.1| CaiB/BaiF family protein [Bordetella bronchiseptica Bbr77]
Length = 402
Score = 274 bits (701), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 126/286 (44%), Positives = 181/286 (63%), Gaps = 2/286 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL +R+LDLTR+++GPFCTMLL DLGAEVIK+E+PV GD+ R +GPPF S YF
Sbjct: 3 PLHGIRVLDLTRVVSGPFCTMLLGDLGAEVIKIEEPVHGDDSRAFGPPFSGGE--SAYFL 60
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNK+S +D K PEG+++++ LA+ DV+++NF PG ++RL LGY L N +L+
Sbjct: 61 SVNRNKRSCAIDLKQPEGKELLRALARASDVVIDNFRPGTMERLGLGYDALRAANPRLVS 120
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TGFG GP RPGYD+I G++ ITG P G P K+G + DL TG +A A+
Sbjct: 121 CSITGFGDSGPDAQRPGYDLIIQGESGIMDITGDPAGLPTKIGTSIADLITGQFASQAIT 180
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
AALL + +G+G+ + +L S+L Y G R G +H + P++ F+ +
Sbjct: 181 AALLERASSGQGRHVGIAMLDCMASLLTFNAGIYFTTGASPTRRGNAHPTIAPYETFQAA 240
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
+G++ IG +DK +Q C V+ LA DPRY A +A+ + L+
Sbjct: 241 DGWLNIGVANDKFWQLFCGVIARPDLADDPRYARAADRVALRAELV 286
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 55/139 (39%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C V+ LA DPRY A RV R L I A K W+ + P +
Sbjct: 257 FCGVIARPDLADDPRYARAADRVALRAELVPRIAALIAAKPRAYWIAALREAGVPCGDIR 316
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
S+++V E + +V ++ H G ++ + + PP LGEHT +L
Sbjct: 317 SVAEVCEAEQLVARGMVFDMPHPSAGQVRNIASPFRFDGAGTAAHRAPPLLGEHTAAILC 376
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ +A L + I+
Sbjct: 377 EHAGLRPERVADLAARGII 395
>gi|334142551|ref|YP_004535759.1| L-carnitine dehydratase/bile acid-inducible protein F
[Novosphingobium sp. PP1Y]
gi|333940583|emb|CCA93941.1| L-carnitine dehydratase/bile acid-inducible protein F
[Novosphingobium sp. PP1Y]
Length = 375
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 128/278 (46%), Positives = 187/278 (67%), Gaps = 5/278 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL----S 271
PLS VR+L+L RI+AGP+C LLADLGAEVIK+E+P +GD+ R+WGPPF+ + + +
Sbjct: 4 PLSGVRVLELARILAGPWCGQLLADLGAEVIKIERPGSGDDTRQWGPPFMMSDDGENLGA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NR K+SV VD T +GQ+++ DL +Q D+++EN+ G L + L + L+++N
Sbjct: 64 AYYHSTNRGKRSVAVDIATAQGQELVCDLVRQADIVIENYKVGGLAKYGLDHASLAKLNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+LI CS+TGFG GP+ RPGYD IA ++GGL+ +TG P P K GIA+ DL TGLY+
Sbjct: 124 RLITCSITGFGQTGPFAHRPGYDYIAQAMGGLMSMTGEPQREPQKAGIAAADLFTGLYST 183
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A++AAL + TG G ID LL T VS++ N N++ +G+ +R G HAN+VP+Q
Sbjct: 184 VAILAALNRRRDTGLGSHIDMALLDTMVSVMANQALNWMTSGVVPRRVGNGHANLVPYQA 243
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
F T +G + I G+D Q+ +C+V++ L D R+ T
Sbjct: 244 FPTRDGELIIAAGNDGQFASLCRVLD-TPLDRDERFAT 280
>gi|424875813|ref|ZP_18299472.1| putative acyl-CoA transferase/carnitine dehydratase [Rhizobium
leguminosarum bv. viciae WSM1455]
gi|393163416|gb|EJC63469.1| putative acyl-CoA transferase/carnitine dehydratase [Rhizobium
leguminosarum bv. viciae WSM1455]
Length = 403
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 127/288 (44%), Positives = 183/288 (63%), Gaps = 8/288 (2%)
Query: 208 LSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-- 265
+S L +RILDL+RI+AGP CT LLADLGA+VIKVE+P TGD+ R WGPPF+
Sbjct: 1 MSDHQKPTSLGGLRILDLSRILAGPTCTQLLADLGADVIKVERPDTGDDTRSWGPPFVPD 60
Query: 266 ---NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLG 322
+++LS YF NRNK+S+ +D + EG +++ LA DV++EN+ PG LDR LG
Sbjct: 61 ADGGDSDLSAYFLSANRNKRSIAIDLASDEGVALVERLAAVSDVVIENYKPGDLDRRGLG 120
Query: 323 YKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD---GPPCKVGI 379
Y+ + +I +++C+++GFG GPY +R GYD + ++GG++ ITG D G P KVG+
Sbjct: 121 YEDIRKIKPDIVWCAISGFGQTGPYAERTGYDFLVQAMGGIMSITGESDTAGGRPLKVGL 180
Query: 380 ASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRW 439
D+ G+YA ++AAL H+ +TG+GQ ID L TQV+ LIN N+L +G R
Sbjct: 181 GIADVMCGMYATVGILAALRHRDRTGEGQYIDLALYDTQVAWLINAATNHLVSGKVPGRI 240
Query: 440 GTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
G H N+ P+Q F T+ G + I G+D+Q+ C + LA D R+
Sbjct: 241 GNRHPNIAPYQTFATAAGEIAIAVGNDQQFARFCTAIGCPDLAGDERF 288
>gi|160895622|ref|YP_001561204.1| L-carnitine dehydratase/bile acid-inducible protein F [Delftia
acidovorans SPH-1]
gi|160361206|gb|ABX32819.1| L-carnitine dehydratase/bile acid-inducible protein F [Delftia
acidovorans SPH-1]
Length = 433
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 133/284 (46%), Positives = 185/284 (65%), Gaps = 10/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L ++R+LDL+R++AGP+CT LAD+GA+VIK+E+P GD+ R WGPPF N ++ +
Sbjct: 23 LGHLRVLDLSRVLAGPWCTQNLADMGADVIKIEKPGEGDDTRHWGPPFFPDAQGNPSDNA 82
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NRNK+S+ VD T EGQQ+I++LA Q DV+VENF G L R L Y LS +N
Sbjct: 83 VYFAACNRNKRSITVDMSTAEGQQLIRELAMQSDVVVENFKTGGLKRYGLDYASLSALNP 142
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+LIYCSVTGFG GPY R GYD++ ++ GL+ ITG P G P +VG+A IDL TG
Sbjct: 143 RLIYCSVTGFGQTGPYAPRAGYDLLVQAMSGLMSITGRADSEPGGGPLRVGVAVIDLFTG 202
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA A++ A+ ++ TG+GQ ID LL +++L N GA +LN G R G +H +VV
Sbjct: 203 MYATTAILGAVEARHHTGRGQHIDMALLDVAMAVLANQGAGFLNTGHVPGRQGNTHPSVV 262
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P+Q F T++G + + G+D Q+ C + A D R+ T A
Sbjct: 263 PYQDFPTADGRMLLAIGNDGQFARFCGAAGVD-WARDERFATNA 305
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 13/140 (9%)
Query: 11 ALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEH 70
A D R+ T A RV +R+ L + T + T EW+ + + + P +N I Q F D
Sbjct: 296 ARDERFATNAGRVIHRDALIPLMSDLTRGRPTAEWIALLEDKAVPCGPINHIGQAFDDAQ 355
Query: 71 IQDIKLVKEISHEKY-------GDI--KIVGPAVAYSL--TQPEVRTPPPALGEHTDYVL 119
++ L + E+Y G+ ++V A L T +R PPALG+HTD VL
Sbjct: 356 VRARGL--RVEQERYPGATPPAGETINRVVTTASPLRLSDTPTTLRHAPPALGQHTDEVL 413
Query: 120 KDLLNYDETTIAKLKEKKIL 139
++ L D + L+ K ++
Sbjct: 414 RERLGLDAQQLQALRVKGVV 433
>gi|346322887|gb|EGX92485.1| CoA-transferase family III [Cordyceps militaris CM01]
Length = 444
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 132/290 (45%), Positives = 186/290 (64%), Gaps = 10/290 (3%)
Query: 211 ENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL 270
E P LPL R+LD+TR++AGP+CT +L DLGAEVIK+E PV GD+ R WGPP+ T+
Sbjct: 36 ETP-LPLEGYRVLDMTRVLAGPYCTQILGDLGAEVIKIEHPVRGDDTRAWGPPYAKYTQE 94
Query: 271 S--------TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLG 322
S YF NRNKKS+ + F+ +G I+ L +CD+LVEN++PG L + +
Sbjct: 95 SGKSGPGEAAYFLGANRNKKSIGLSFQHKDGVDILHKLVAKCDILVENYLPGTLKKYGMD 154
Query: 323 YKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASI 382
Y+ L +IN LIY S+TG+G GPY R GYD++ + GL+HITG DGPP KVG+A
Sbjct: 155 YETLRKINPSLIYTSITGYGQTGPYSSRAGYDVMVEAEFGLMHITGARDGPPVKVGVAVT 214
Query: 383 DLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAG-IEGKRWGT 441
DL TGLYA ++MAALL + K+GKGQ ID L Q + L N+ ++ L +G + RWGT
Sbjct: 215 DLTTGLYASNSIMAALLGRGKSGKGQHIDVALSDCQTATLANIASSCLVSGKRDTGRWGT 274
Query: 442 SHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
+H ++VP++ FKT +G + G G+D+ + + + + D +Y T A
Sbjct: 275 AHPSIVPYKSFKTKDGDILFGGGNDRLFGILADGLGMPQWKDDAKYKTNA 324
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 76/128 (59%)
Query: 13 DPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEHIQ 72
D +Y T A RV NR L +IEA + +KTT EWL +F+G PYA VN + EH +
Sbjct: 317 DAKYKTNADRVANRVELEDKIEALSQQKTTHEWLAVFEGRGMPYAAVNDVQDTLNLEHTK 376
Query: 73 DIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETTIAK 132
+V E+ H G IK+V V +S TQP VRTPPP LG+HTD +L + L E I
Sbjct: 377 ARNMVVEVQHGDCGLIKLVNSPVKFSETQPGVRTPPPTLGQHTDELLSEHLGMSEAEITA 436
Query: 133 LKEKKILG 140
LKE+ ++G
Sbjct: 437 LKEQGVIG 444
>gi|347538285|ref|YP_004845709.1| formyl-CoA transferase [Pseudogulbenkiania sp. NH8B]
gi|345641462|dbj|BAK75295.1| formyl-CoA transferase [Pseudogulbenkiania sp. NH8B]
Length = 397
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 134/274 (48%), Positives = 182/274 (66%), Gaps = 2/274 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
LS ++LDLTR++AGP+ LLADLGAEVIKVE+P GD+ R+W PP L + + YF C
Sbjct: 5 LSGFKVLDLTRVLAGPWTGQLLADLGAEVIKVERPGQGDDTRQWAPPSLPDGT-AAYFLC 63
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
NR K+SV VD PEGQ I++ LA++ DVL+EN+ G L + L Y L +N +L+YC
Sbjct: 64 ANRGKRSVTVDITRPEGQAIVRRLAEEADVLLENYKVGGLKKYGLDYDSLKSLNPRLVYC 123
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S+TGFG GPY + PGYD I + GL+ ITG DG P KVG+A DL TGLYA AV A
Sbjct: 124 SITGFGQDGPYAELPGYDYIVQGMSGLMSITGPADGEPHKVGVAVTDLFTGLYAANAVQA 183
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS- 455
ALL + +TG+GQ ID L ++ML NV N+L R G +H N+VP+QVFKT+
Sbjct: 184 ALLARSRTGQGQYIDMALFDCSLAMLANVNMNWLIGRTVPPRLGNAHPNIVPYQVFKTAG 243
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+G+ + G+DKQ++ +C+++ LA D R+ +
Sbjct: 244 DGHFILACGNDKQFRAVCQLIGQPQLADDERFAS 277
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 1/139 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+++ LA D R+ + RV+ RE L + + +EWL P +N
Sbjct: 260 VCQLIGQPQLADDERFASNPARVQYREQLVPMLAEAFRTRGRDEWLKALDKAGVPCGPIN 319
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++++ FAD I+ + + D+ +VG + S T E PP LG TD VL
Sbjct: 320 NVAEAFADPQIRHRGMEIHLEDSAGQDVPLVGCPIKLSGTPVEYHRAPPKLGADTDEVLG 379
Query: 121 DLLNYDETTIAKLKEKKIL 139
L YD I +L + I+
Sbjct: 380 -ALGYDGEAIVQLHQSGII 397
>gi|158424423|ref|YP_001525715.1| acyl-CoA transferase [Azorhizobium caulinodans ORS 571]
gi|158331312|dbj|BAF88797.1| putative acyl-CoA transferase [Azorhizobium caulinodans ORS 571]
Length = 388
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 131/280 (46%), Positives = 181/280 (64%), Gaps = 5/280 (1%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL---NNTEL 270
S PL +++L+L RI+AGP+ +LADLGA+V+KVE P GD+ R WGPPF+ + +L
Sbjct: 2 SGPLEGLKVLELARILAGPWVGQVLADLGADVVKVESP-DGDDTRTWGPPFVPAADGGDL 60
Query: 271 ST-YFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEI 329
S YF NR KKSV +DF+TPEGQ+ ++ LA + DVLVENF G L + L + L +
Sbjct: 61 SAAYFHAANRGKKSVVIDFRTPEGQEEVRRLAAKADVLVENFKVGGLKKYGLDAESLKAV 120
Query: 330 NSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLY 389
N +LIYCS+TGFG GPY +R GYD + +GG++ +TG P G P KVG+A D+ TGLY
Sbjct: 121 NPRLIYCSITGFGQTGPYAERAGYDYLVQGMGGIMSLTGEPAGEPMKVGVAFADIYTGLY 180
Query: 390 AHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPH 449
A +++AL + TG+G +D LL QV +L N NYL +G R G +H N+VP+
Sbjct: 181 ATVGILSALRRRDATGQGAVVDMALLDCQVGVLANQAMNYLVSGKAPARLGNAHPNIVPY 240
Query: 450 QVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
QVF ++GYV I G+D Q++ C V+ + DP Y T
Sbjct: 241 QVFPVADGYVIIAVGNDGQFRRFCTVLGIPETGTDPDYAT 280
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 49/121 (40%), Gaps = 10/121 (8%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C V+ + DP Y T RV NR L + + + L + P +N
Sbjct: 263 FCTVLGIPETGTDPDYATNRDRVRNRAALGAILSERMATFQKADLLAKLEAEGVPAGPIN 322
Query: 61 SISQVFADEHI--QDIKLVKEISHEKYGDIKIVGPAVAYSLT---QPEVR-TPPPALGEH 114
++ +VFAD + + +++ E G + P V +T +P V P P LG H
Sbjct: 323 TLDEVFADPQVIARGLRIDMEAPDAAGGTV----PGVRTPITIDGEPMVSGQPSPELGSH 378
Query: 115 T 115
T
Sbjct: 379 T 379
>gi|359430787|ref|ZP_09221772.1| putative CoA-transferase [Acinetobacter sp. NBRC 100985]
gi|358233798|dbj|GAB03311.1| putative CoA-transferase [Acinetobacter sp. NBRC 100985]
Length = 417
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 135/291 (46%), Positives = 184/291 (63%), Gaps = 9/291 (3%)
Query: 206 LALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL 265
L L+ E L +R+LDL+R++AGP+C +L DLGAEVIKVE+P GD+ R WGPP++
Sbjct: 5 LNLTGEISMGALKGIRVLDLSRVLAGPWCGQILGDLGAEVIKVERPKIGDDTRSWGPPWM 64
Query: 266 -----NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLN 320
+ T + Y+ NRNK SV +D T EGQ++IK L DVL+EN+ G L +
Sbjct: 65 QSDDGDETREAAYYQSANRNKLSVAIDISTVEGQELIKKLILDTDVLIENYKAGSLKKYG 124
Query: 321 LGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCK 376
L Y+ + +N +LIYCS+TGFG GP + PGYD I +GGL+ +TG P G P K
Sbjct: 125 LDYESFASLNPKLIYCSITGFGQDGPRAEEPGYDFIIQGMGGLMSVTGERDDFPGGGPQK 184
Query: 377 VGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEG 436
VG+A DL TGLY+ A+ AALL++ TG GQ ID LL Q++ L N G NYL +G
Sbjct: 185 VGVAFSDLTTGLYSTIAIQAALLNRNTTGLGQHIDMALLDVQIATLANQGMNYLTSGNVP 244
Query: 437 KRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
KR+G +HAN+VP+Q+FK + I G+D Q+ +CK + L LA D R+
Sbjct: 245 KRYGNAHANIVPYQLFKACDREFIIACGNDTQFFQLCKSIGLPELADDVRF 295
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 77/140 (55%), Gaps = 2/140 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK + L LA D R+ A R++ R + + A + KT +EW+ + Q V P +N
Sbjct: 280 LCKSIGLPELADDVRFKRNADRIKYRNEVIDILSAHFLTKTADEWVRLIQAVKVPVGLIN 339
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q F + + K++ ++ H + +++VG + S T E R PP LGEHT VLK
Sbjct: 340 NLEQAFQEPQVVARKMLIDMQHTQREKLRMVGSPIKLSRTPVEYRYAPPLLGEHTSDVLK 399
Query: 121 DLLNYDETTIAKLKEKKILG 140
+++ ++ +A+LK ++G
Sbjct: 400 HIVSQEK--LAELKANGVIG 417
>gi|429206689|ref|ZP_19197953.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhodobacter
sp. AKP1]
gi|428190275|gb|EKX58823.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhodobacter
sp. AKP1]
Length = 381
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 123/289 (42%), Positives = 184/289 (63%), Gaps = 3/289 (1%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN--NTELS 271
S PL+ +R+++L RI+AGP+ +LADLGA+V+KVE P GD+ R+WGPPF+ +
Sbjct: 2 SAPLAGIRVVELARILAGPWAGQVLADLGADVVKVEAP-EGDDTRRWGPPFIEREGDRSA 60
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NR K+SV DF+TPEGQ+ ++ L DV++ENF G L + L + L ++N
Sbjct: 61 AYFHAANRGKRSVTADFRTPEGQETVRRLVADADVVIENFKVGGLAKYGLDWPSLQKVNP 120
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+L+YCS+TGFG GPY R GYD I + GL+ +TG +G P KVG+A D+ TG+YA
Sbjct: 121 RLVYCSITGFGQDGPYAHRAGYDFIIQGMAGLMSVTGAAEGQPQKVGVAVTDIFTGIYAA 180
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A++AAL + TG+GQ++D L+ ++ N NYL G+ ++ G H N+ P+ V
Sbjct: 181 TAILAALHQRAGTGRGQQVDMALMDVAAGIMANQAMNYLATGVAPRKMGNEHPNLAPYAV 240
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHL 500
F ++G++ I TG+D QY+ +C ++ L LA P +LT A +A + L
Sbjct: 241 FDCADGWIIIATGNDAQYRRLCTLLGLPGLATAPAFLTNADRVANRAEL 289
>gi|51892392|ref|YP_075083.1| hypothetical protein STH1254 [Symbiobacterium thermophilum IAM
14863]
gi|51856081|dbj|BAD40239.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
14863]
Length = 391
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 123/276 (44%), Positives = 181/276 (65%), Gaps = 9/276 (3%)
Query: 222 ILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL-------STYF 274
+LDL+R++AGP+C +L D GA+VIKVE P GD+ R WGPPFL E S Y+
Sbjct: 1 MLDLSRVLAGPYCAQMLGDAGADVIKVESP-AGDDTRAWGPPFLAGCEPQPGRPGDSAYY 59
Query: 275 TCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKH-LSEINSQL 333
NRNK+ + +D TP GQ+ + L + DVL+ENF PG ++R LGY+ L +N +L
Sbjct: 60 VSCNRNKRGIVLDLTTPHGQEALCRLVARADVLIENFKPGTMERWGLGYEDVLRPLNPRL 119
Query: 334 IYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGA 393
+Y S++G+G GP D PGYD +A ++GG++ ITG P+G P KVG+A DL TG+ A A
Sbjct: 120 VYASISGYGRTGPDADLPGYDFVAQAVGGIMSITGEPEGDPMKVGVAVTDLTTGMMAAFA 179
Query: 394 VMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFK 453
+ AAL+ + TG+GQ++D +LL TQV+ L NVG +YL +G +RWG +HA++VP+++F
Sbjct: 180 ICAALIARQATGRGQRVDLSLLETQVAWLANVGQSYLVSGQPPRRWGNAHASIVPYELFH 239
Query: 454 TSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
++ + +G G+D Q+ C V+ A D R+ T
Sbjct: 240 AADRPIVVGVGNDAQFARFCAVLGRPEWAADERFAT 275
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 55/122 (45%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C V+ A D R+ T R+ +R L I + + EWL + P V
Sbjct: 258 FCAVLGRPEWAADERFATNPARLRHRRELVGLIARELRTRPAAEWLAAMRAAGVPSGPVR 317
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I +VFAD + + E +H G I ++G +S T VR PPP GEHT VL
Sbjct: 318 TIPEVFADPQVLARGMKVECNHPVAGLISLIGIPFKFSDTPATVRRPPPRWGEHTAEVLA 377
Query: 121 DL 122
++
Sbjct: 378 EI 379
>gi|365085312|ref|ZP_09327128.1| formyl-CoA transferase [Acidovorax sp. NO-1]
gi|363417845|gb|EHL24896.1| formyl-CoA transferase [Acidovorax sp. NO-1]
Length = 422
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 132/298 (44%), Positives = 192/298 (64%), Gaps = 13/298 (4%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ +++LDL+R++AGP+CT +LADLGA+V+KVE+P GD+ R+WGPPFL N+T +
Sbjct: 9 LAGIKVLDLSRVLAGPWCTQILADLGADVVKVERPGVGDDTRQWGPPFLKDAEGNDTNQA 68
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+Y+T NRNK+SV +D +PEGQ +IK +A++ D++VENF G L + L ++ L +N
Sbjct: 69 SYYTACNRNKRSVTIDMASPEGQALIKQMAQEADIVVENFKVGGLKQYGLDHESLRALNP 128
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITG----HPDGPPCKVGIASIDLATG 387
+LIYCSVTGFG GPY +R GYD++ ++ GL+ ITG P G P +VG+A IDL TG
Sbjct: 129 RLIYCSVTGFGQDGPYAERAGYDLMVQAMTGLMSITGQADNQPGGGPMRVGVAVIDLFTG 188
Query: 388 LYAHGAVMAALLHK----YKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSH 443
LYA A++AAL + TG+GQ ID LL +++L N + +L G R G SH
Sbjct: 189 LYASNAILAALHVRDNAVNGTGQGQHIDMALLDVGMAVLANQASGFLATGKAPGRMGNSH 248
Query: 444 ANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
++ P+Q F T +G + + G+D Q+Q C A DPR+ T L + + LI
Sbjct: 249 PSLAPYQDFPTQDGNMLLAIGNDGQFQRFCAAAEQPQWASDPRFATNTLRVQNRTALI 306
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 71/147 (48%), Gaps = 9/147 (6%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C A DPR+ T LRV+NR L +EA T +TT +W+ + + + P +N
Sbjct: 277 FCAAAEQPQWASDPRFATNTLRVQNRTALIPAMEAVTRTRTTADWITLLEDKAVPCGPIN 336
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGD--------IKIVGPAVAYSLTQPEVRTPPPALG 112
+I+Q F D +Q L + K G+ I V + S T P +R PPALG
Sbjct: 337 TIAQAFDDAQVQARGLAVTLPRWKDGEAATDNVQQITGVASPLRLSATPPVLRNAPPALG 396
Query: 113 EHTDYVLKDLLNYDETTIAKLKEKKIL 139
+HTD VL++ L D IA L+ +
Sbjct: 397 QHTDEVLRE-LGLDSARIAALRASGVF 422
>gi|400754116|ref|YP_006562484.1| hypothetical protein PGA2_c12320 [Phaeobacter gallaeciensis 2.10]
gi|398653269|gb|AFO87239.1| hypothetical protein PGA2_c12320 [Phaeobacter gallaeciensis 2.10]
Length = 406
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 131/293 (44%), Positives = 187/293 (63%), Gaps = 6/293 (2%)
Query: 203 SLDLALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTG-DECRKWG 261
S D A + P PL+ +++LDL+RI+AGP CT +L DLGA V+KVE P +G D+ R+WG
Sbjct: 3 SSDPAADGKLPHGPLTGIKVLDLSRILAGPTCTQMLGDLGASVLKVENPQSGGDDTRQWG 62
Query: 262 PPFLNNTE-----LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKL 316
PP++ + E LS YF NRNK+SV VD T EGQQ+I+ LA D+L+ENF PG L
Sbjct: 63 PPYVIDAEGQQSDLSAYFMAANRNKRSVEVDISTVEGQQVIRRLAADADILLENFKPGGL 122
Query: 317 DRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCK 376
+ L Y L L+Y S++G+G GP +PGYD++A GG++ +TG PDG P K
Sbjct: 123 AKYGLDYDSLHAEFPHLVYGSISGYGQTGPNAQKPGYDLMAQGYGGIMSLTGEPDGRPMK 182
Query: 377 VGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEG 436
VG+ D+ G+YA ++AAL HK +TG+GQ++D L+ Q++ LIN G LN G
Sbjct: 183 VGVGIADVMCGMYACVGILAALRHKEQTGEGQQVDIALVDAQIAWLINEGVATLNTGTAP 242
Query: 437 KRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
KR G H ++VP+ +++TS+G+V + G+D Q+ + L LA DPR+ T
Sbjct: 243 KRRGNEHPSIVPYGLYETSDGHVILAVGNDAQFGRFLSFLGLDGLARDPRFAT 295
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Query: 5 MNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQ 64
+ L LA DPR+ T R++NR+ L + + +T+ + + P V ++ Q
Sbjct: 282 LGLDGLARDPRFATNPARLQNRDALADILVPALRQYSTDAVIAAMEARKVPAGPVQTLDQ 341
Query: 65 VFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTD 116
VFA + + ++ E++ G ++++G + +S T R PP G+ TD
Sbjct: 342 VFATDQVAAREMTIEMTSAA-GPVRLLGNPLKFSRTPVTYRHAPPTCGDSTD 392
>gi|398959342|ref|ZP_10678099.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM33]
gi|398145395|gb|EJM34182.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM33]
Length = 412
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 131/280 (46%), Positives = 180/280 (64%), Gaps = 9/280 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
L+ R+LDL+R++AGP+C LADLGAEVIK+E+P GD+ R WGPP++ T +
Sbjct: 4 LTGYRVLDLSRVLAGPWCGQTLADLGAEVIKIERPGAGDDTRGWGPPWMKGQNGKTTNEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+Y+ NR K SV ++ + EGQ++++ LA CDVL+EN+ G L + L Y LS +N
Sbjct: 64 SYYQSTNRGKLSVALNLASAEGQELVRALATSCDVLIENYKAGSLAKYGLDYASLSRLNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCSVTGFG GP PGYD I IGGL+ ITG P G P KVG+A DL TG
Sbjct: 124 RLVYCSVTGFGQTGPRAAEPGYDFIIQGIGGLMSITGERDDLPGGGPQKVGVAFSDLMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AALL + KTG GQ +D LL QV+ L N N+L +G R+G +HAN+V
Sbjct: 184 LYSTVAIQAALLSREKTGVGQHVDMALLDVQVATLCNQSQNFLASGKSPGRYGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
P+QVF+ S+ I G+D Q+ +C+ + L L+ DPR+
Sbjct: 244 PYQVFRASDQDFVIACGNDSQFVALCESIGLADLSSDPRF 283
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 72/145 (49%), Gaps = 3/145 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + L L+ DPR+ A RV NRE L + + + T +EW+ P +N
Sbjct: 268 LCESIGLADLSSDPRFSRNADRVTNREALIEMLAQHFLAATADEWVRRIHPQGVPIGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI+Q + ++ ++ I H D VG + S T E P P LGEHTD VLK
Sbjct: 328 SIAQALDEPQVKARNMLVNIPHPLKADFVTVGSPIKLSGTPVEYLRPAPMLGEHTDEVLK 387
Query: 121 DLLNYDETTIAKLKEKKILGLIERL 145
L D+ + +LK + G+IE+L
Sbjct: 388 RQLGLDDERLIELKAR---GVIEQL 409
>gi|309783452|ref|ZP_07678157.1| CAIB/BAIF family protein [Ralstonia sp. 5_7_47FAA]
gi|404397823|ref|ZP_10989610.1| hypothetical protein HMPREF0989_04828 [Ralstonia sp. 5_2_56FAA]
gi|308917783|gb|EFP63475.1| CAIB/BAIF family protein [Ralstonia sp. 5_7_47FAA]
gi|348609991|gb|EGY59700.1| hypothetical protein HMPREF0989_04828 [Ralstonia sp. 5_2_56FAA]
Length = 406
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 134/280 (47%), Positives = 184/280 (65%), Gaps = 9/280 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDLTR++AGP+CT LADLGA+VIK+E+P GD+ R WGPP+ N T +
Sbjct: 4 LSHLRVLDLTRVLAGPWCTQTLADLGADVIKIERPSAGDDTRHWGPPYAKDAEGNATTEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ VNRNKKSV +D TP+GQ +I L + DVLVEN+ G+L + L Y+ L I
Sbjct: 64 AYYLAVNRNKKSVTLDISTPQGQALIAQLVAEADVLVENYKVGQLAKYGLDYESLKAIKP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
LIYCS+TGFG GPY RPGYD I +GG + +TG P G P K G+A DL TG
Sbjct: 124 NLIYCSITGFGQTGPYAPRPGYDFIVQGMGGFMSVTGERDDLPGGGPQKAGVAIADLFTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+A A++AAL H+ +TG+GQ +D LL QV+M+ N+ NYL +RWG +H N+V
Sbjct: 184 AHATIAILAALAHRDRTGEGQHLDICLLDVQVAMMANMATNYLATDTSPQRWGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
P+QVFK ++G+V + G+D Q++ + +V LA D R+
Sbjct: 244 PYQVFKVADGWVIVACGNDGQFRKLVEVGGEPALADDERF 283
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 65/130 (50%)
Query: 10 LALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADE 69
LA D R+ RV NR++L +E + KT +W+ + P +N ++ VF D
Sbjct: 277 LADDERFAINPQRVRNRQVLVPLLEPMMLRKTRAQWIAALESAGVPCGPINDLADVFKDP 336
Query: 70 HIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETT 129
H+ ++ ++ H G I + A+ S + E R PPP LGEHTD VL L +
Sbjct: 337 HVLAREMRLDLPHPTAGHISVPASALKMSGSPVEYRMPPPLLGEHTDSVLGQLAGLSTSE 396
Query: 130 IAKLKEKKIL 139
+ +L+ + ++
Sbjct: 397 LEELRLRAVI 406
>gi|126460892|ref|YP_001042006.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhodobacter
sphaeroides ATCC 17029]
gi|126102556|gb|ABN75234.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhodobacter
sphaeroides ATCC 17029]
Length = 381
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 123/289 (42%), Positives = 184/289 (63%), Gaps = 3/289 (1%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN--NTELS 271
S PL+ +R+++L RI+AGP+ +LADLGA+V+KVE P GD+ R+WGPPF+ +
Sbjct: 2 SAPLAGIRVVELARILAGPWAGQVLADLGADVVKVEAP-EGDDTRRWGPPFIEREGDRSA 60
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NR K+SV DF+TPEGQ+ ++ L DV++ENF G L + L + L ++N
Sbjct: 61 AYFHAANRGKRSVTADFRTPEGQETVRRLVADADVVIENFKVGGLAKYGLDWPSLQKVNP 120
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+L+YCS+TGFG GPY R GYD I + GL+ +TG +G P KVG+A D+ TG+YA
Sbjct: 121 RLVYCSITGFGQDGPYAHRAGYDFIIQGMAGLMSVTGAAEGQPQKVGVAVTDIFTGIYAA 180
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A++AAL + TG+GQ++D L+ ++ N NYL G+ ++ G H N+ P+ V
Sbjct: 181 TAILAALHQRAGTGRGQQVDMALMDVAAGIMANQAMNYLATGVAPRKMGNEHPNLAPYAV 240
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHL 500
F ++G++ I TG+D QY+ +C ++ L LA P +LT A +A + L
Sbjct: 241 FDCADGWIIIATGNDAQYRRLCTLLGLPGLATAPAFLTNADRVANRAEL 289
>gi|452841788|gb|EME43724.1| hypothetical protein DOTSEDRAFT_53044 [Dothistroma septosporum
NZE10]
Length = 456
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 130/279 (46%), Positives = 183/279 (65%), Gaps = 6/279 (2%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKW---GPPFLNNTE---L 270
L+ ++ILDL+R++A P+CT +LAD GA+VIK+E P GD+ R W G N + +
Sbjct: 56 LAGIKILDLSRVLAAPYCTQILADYGADVIKIEDPDRGDDTRYWQVSGEGSSWNPDAGPI 115
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
S YF VNRNK+S+ ++ K + + I L + DV+VEN PG LDRLNLGY LS+IN
Sbjct: 116 SNYFAAVNRNKRSLTLNLKNTKARDIFLKLVAEADVVVENLRPGALDRLNLGYDTLSKIN 175
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYA 390
++I S +G+GS GPY R GYD+IA + GLLH+TG G P + G+ D+ TGLY
Sbjct: 176 PRIILASTSGYGSSGPYARRAGYDMIAGAEAGLLHLTGERGGKPVRPGLGLTDMCTGLYM 235
Query: 391 HGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQ 450
HGA+ AAL + +TG GQK+D +L TQV++L NVG ++LN GIE +RWGT H +VVP+
Sbjct: 236 HGAITAALYARERTGVGQKLDGSLFETQVALLTNVGLSWLNLGIEAERWGTQHPSVVPYD 295
Query: 451 VFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
F+TS+ Y G +DKQ+ + + + L+ D R+ T
Sbjct: 296 AFQTSDLYFVCGATNDKQFAKLVEKLGRPELSSDKRFST 334
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 68/128 (53%), Gaps = 3/128 (2%)
Query: 9 HLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFAD 68
L+ D R+ T RV NRE L + KTT EW F+G PYA +N++ +VF
Sbjct: 325 ELSSDKRFSTNPDRVANREALADILNELFRTKTTAEWEQQFEGSGLPYAPINTMERVFEH 384
Query: 69 EHIQDIKLVKEISHEKY--GDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYD 126
I ++V+E+ + G IK++GPAV +S T +RT PP GEHT +L + L D
Sbjct: 385 PQIDARQMVEEMKFDAASKGAIKVIGPAVKFSKTPATIRTRPPLHGEHTIEILGE-LGID 443
Query: 127 ETTIAKLK 134
T LK
Sbjct: 444 ATEAEALK 451
>gi|440227139|ref|YP_007334230.1| L-carnitine dehydratase [Rhizobium tropici CIAT 899]
gi|440038650|gb|AGB71684.1| L-carnitine dehydratase [Rhizobium tropici CIAT 899]
Length = 400
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 124/278 (44%), Positives = 181/278 (65%), Gaps = 4/278 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE----LS 271
PLS +R+++L R++AGP+ +LADLGA+VIKVE P GD+ R+WGPPF+ + +
Sbjct: 10 PLSGIRVIELARVLAGPWAGQMLADLGADVIKVENPDGGDDTRQWGPPFVEGKDGENLSA 69
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NR K+S+ D KT EGQ++++ L K DV++ENF G L + L Y+ L +INS
Sbjct: 70 AYYHSANRGKRSITADLKTEEGQELVRRLVKTADVVIENFKLGGLVKYGLDYESLRKINS 129
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+++YCS+TGFG GPY GYD I + G + ITG PDG P K G+A D+ TG+YA
Sbjct: 130 RIVYCSITGFGQTGPYASLAGYDYIVQGMSGFMSITGEPDGQPMKAGVAIADIFTGIYAV 189
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A+ AAL+H KTG+GQ ID LL Q ++L N NYL +G R G +H N+ P++V
Sbjct: 190 SAIEAALIHALKTGEGQLIDMALLDVQSAVLANQNMNYLISGKPPVRLGNAHPNISPYEV 249
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
T++GY+ + G+D Q++ +C ++ ++ A D RY T
Sbjct: 250 VPTADGYLILAVGNDGQFRRLCAILGMETNADDERYAT 287
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 55/122 (45%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ ++ A D RY T RV NR + I A+T++ E L + + P +N
Sbjct: 270 LCAILGMETNADDERYATNKARVANRNEVRAFISAETLKWNKAELLKACEANAVPAGAIN 329
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I +FAD I L ++ I V + S T P P LGEH + VL
Sbjct: 330 TIEDMFADPQIVARGLRIDLEDSAGTVIPSVRTPIVLSETPLTYTRPSPRLGEHQEEVLA 389
Query: 121 DL 122
+L
Sbjct: 390 EL 391
>gi|77462002|ref|YP_351506.1| acyl-CoA transferase/carnitine dehydratase [Rhodobacter sphaeroides
2.4.1]
gi|77386420|gb|ABA77605.1| Putative acyl-CoA transferase/carnitine dehydratase [Rhodobacter
sphaeroides 2.4.1]
Length = 381
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 123/289 (42%), Positives = 184/289 (63%), Gaps = 3/289 (1%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN--NTELS 271
S PL+ +R+++L RI+AGP+ +LADLGA+V+KVE P GD+ R+WGPPF+ +
Sbjct: 2 SAPLAGIRVVELARILAGPWAGQVLADLGADVVKVEAP-EGDDTRRWGPPFIEREGDRSA 60
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NR K+SV DF+TPEGQ+ ++ L DV++ENF G L + L + L ++N
Sbjct: 61 AYFHAANRGKRSVTADFRTPEGQETVRRLVADADVVIENFKVGGLAKYGLDWPSLQKVNP 120
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+L+YCS+TGFG GPY R GYD I + GL+ +TG +G P KVG+A D+ TG+YA
Sbjct: 121 RLVYCSITGFGQDGPYAHRAGYDFIIQGMAGLMSVTGAAEGQPQKVGVAVTDIFTGIYAA 180
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A++AAL + TG+GQ++D L+ ++ N NYL G+ ++ G H N+ P+ V
Sbjct: 181 TAILAALHQRAGTGRGQQVDMALMDVAAGIMANQAMNYLATGVAPRKMGNEHPNLAPYAV 240
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHL 500
F ++G++ I TG+D QY+ +C ++ L LA P +LT A +A + L
Sbjct: 241 FDCADGWIIIATGNDAQYRRLCTLLGLPGLATAPAFLTNADRVANRAEL 289
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 5/126 (3%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ L LA P +LT A RV NR L + + A T E L + P +N
Sbjct: 261 LCTLLGLPGLATAPAFLTNADRVANRAELTRALTAVTSGWRKAELLAACEAEGVPAGPIN 320
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+++VFAD I+ + +I+ G + V +S + + P P LGEH VL
Sbjct: 321 DMAEVFADPQIRHRGM--QIAP---GGVPGVRSPFRFSEAELALARPAPRLGEHRAEVLG 375
Query: 121 DLLNYD 126
+ + D
Sbjct: 376 EPADQD 381
>gi|293607723|ref|ZP_06690054.1| CAIB/BAIF family protein [Achromobacter piechaudii ATCC 43553]
gi|292813861|gb|EFF73011.1| CAIB/BAIF family protein [Achromobacter piechaudii ATCC 43553]
Length = 406
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 127/282 (45%), Positives = 185/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LSNV++LDL+RI+AGP+ + +LADLGA+VIKVE+P GD+ R WGPPFL +T
Sbjct: 5 LSNVKVLDLSRILAGPWASQILADLGADVIKVERPGQGDDTRSWGPPFLKDEAGQDTTDG 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NR K+S+ +D +TPEGQ ++K+L + DV++EN+ G L RL L Y LS+IN
Sbjct: 65 AYFIATNRGKRSITLDLQTPEGQALVKELCRDADVVLENYKVGTLARLGLDYDSLSKINP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITG----HPDGPPCKVGIASIDLATG 387
+L+YCSVTGFG GP P YD + ++GGL+ +TG P G P KVG+ +DL TG
Sbjct: 125 RLVYCSVTGFGQTGPRAAEPAYDFLIQAMGGLMSVTGERDDRPGGGPQKVGVPIVDLTTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA ++AALL + +TG+G+ ID +L QV +L N N+L +R GT+H N+
Sbjct: 185 VYAALGIVAALLRRSQTGQGEYIDVAMLDVQVGLLANQAMNFLLGNRVPRRTGTAHPNIQ 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P + F ++G + I G+D Q+ +C+++ LA DPR+++
Sbjct: 245 PQRTFACADGDIVIVVGNDAQFAALCRLLGKPELAEDPRFVS 286
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+++ LA DPR+++ + RV ++ L ++A + + WL + P +N
Sbjct: 269 LCRLLGKPELAEDPRFVSNSKRVTHQATLDPILDAIFITQPRAHWLAALKSAGVPAGSIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ +VF D + +++ + H + V + ++ PP LG+HT VL
Sbjct: 329 TVPEVFDDPQVAHRAMLRHLPHPAAKSVPQVMNPLRFATADLRADRAPPLLGQHTAEVLA 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L E I L+++KI+
Sbjct: 389 ELGKSAE-QIDDLRQRKII 406
>gi|242782098|ref|XP_002479935.1| CAIB/BAIF family enzyme [Talaromyces stipitatus ATCC 10500]
gi|218720082|gb|EED19501.1| CAIB/BAIF family enzyme [Talaromyces stipitatus ATCC 10500]
Length = 448
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 127/282 (45%), Positives = 186/282 (65%), Gaps = 8/282 (2%)
Query: 215 LPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE----- 269
LPL +R+LD+TR++AGP+CT +L DLGA+VIK+E P GD+ R WGPPF +
Sbjct: 44 LPLEGIRVLDMTRVLAGPYCTQILGDLGADVIKIEHPQRGDDTRAWGPPFAKYQDGSKKG 103
Query: 270 --LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLS 327
S Y+ VNRNKKS+ + F G +I+ L K+CDVLVEN++PG L + + Y+ LS
Sbjct: 104 PGESAYYLAVNRNKKSIGLSFAHTSGVEILHKLVKECDVLVENYLPGSLKKYAMDYETLS 163
Query: 328 EINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATG 387
+IN +LIY S+TG+G GPY++R GYD++ + GL+HITG DGPP KVG+A DL TG
Sbjct: 164 KINPKLIYASITGYGQTGPYRNRAGYDVMVEAEFGLMHITGSRDGPPVKVGVAVTDLTTG 223
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAG-IEGKRWGTSHANV 446
LY A+MAA++ + +TGKGQ ID L QV+ L N+ ++ L +G + RWGT+H ++
Sbjct: 224 LYTSNAIMAAIIARGRTGKGQHIDACLSDVQVATLANLASSALISGEKDSGRWGTAHPSI 283
Query: 447 VPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYL 488
VP++ +KT +G + G G+D+ + + + D R++
Sbjct: 284 VPYRSYKTLDGDILFGGGNDRLFGVLSDRLEHPEWKTDDRFV 325
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 77/127 (60%)
Query: 13 DPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEHIQ 72
D R++ + RV NR L IE T KTT+EWL +F+G PYA VN I EH++
Sbjct: 321 DDRFVKNSNRVANRVELDGMIEEITKTKTTQEWLGLFEGSGMPYAAVNDIQGTLNHEHVR 380
Query: 73 DIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETTIAK 132
+V EI H + G +K+V + YS +P VRTPPP LG+HTD VL+ LL+Y + I
Sbjct: 381 ARGMVTEIEHPECGPMKLVNTPIKYSHAKPGVRTPPPTLGQHTDEVLQGLLDYSKDEILS 440
Query: 133 LKEKKIL 139
LK++ ++
Sbjct: 441 LKQEGVI 447
>gi|412341027|ref|YP_006969782.1| CaiB/BaiF family protein [Bordetella bronchiseptica 253]
gi|408770861|emb|CCJ55659.1| CaiB/BaiF family protein [Bordetella bronchiseptica 253]
Length = 402
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 126/286 (44%), Positives = 181/286 (63%), Gaps = 2/286 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL +R+LDLTR+++GPFCTMLL DLGAEVIK+E+PV GD+ R +GPPF S YF
Sbjct: 3 PLHGIRVLDLTRVVSGPFCTMLLGDLGAEVIKIEEPVHGDDSRAFGPPFSGGE--SAYFL 60
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNK+S +D K PEG+++++ LA+ DV+++NF PG + RL LGY L N +L+
Sbjct: 61 SVNRNKRSCAIDLKQPEGKELLRALARASDVVIDNFRPGTMARLGLGYDALRAANPRLVS 120
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TGFG GP RPGYD+I G++ ITG P G P K+G + DL TG +A A+
Sbjct: 121 CSITGFGDSGPDAQRPGYDLIIQGESGIMDITGDPAGLPTKIGTSIADLITGQFASQAIT 180
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
AALL + +G+G+ + +L S+L Y G R G +H ++ P++ F+ +
Sbjct: 181 AALLERASSGQGRHVGIAMLDCMASLLTFNAGIYFTTGASPTRRGNAHPSIAPYETFQAA 240
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
+G++ IG +DK +Q C V+ LA DPRY A +A+ + L+
Sbjct: 241 DGWLNIGVANDKFWQLFCGVIARPDLADDPRYARAADRVALRAELV 286
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 55/139 (39%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C V+ LA DPRY A RV R L I A K W+ + P +
Sbjct: 257 FCGVIARPDLADDPRYARAADRVALRAELVPRIAALIAAKPRAYWIAALREAGVPCGDIR 316
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
S+++V E + +V ++ H G ++ + + PP LGEHT +L
Sbjct: 317 SVAEVCEAEQLVSRGMVFDMPHPSAGQVRNIASPFRFDGAGTAAHRAPPLLGEHTAAILC 376
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ +A L + I+
Sbjct: 377 EHAGLRPERVADLAARGII 395
>gi|403160644|ref|XP_003321117.2| hypothetical protein PGTG_02159 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375170334|gb|EFP76698.2| hypothetical protein PGTG_02159 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 450
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 128/290 (44%), Positives = 192/290 (66%), Gaps = 14/290 (4%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECR--------KWGPP-FLN 266
PL +R+LDL+RI+AGP LL DLGA+VIK+E+P GD+ R + P F
Sbjct: 41 PLKGIRVLDLSRILAGPSAAQLLGDLGADVIKIEEPGRGDDTRWLQTQYEQQQDPQVFKP 100
Query: 267 NTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHL 326
++ LS YF NRNK+S+ ++ K P+G QI+K L + DVL+ENF+ GK++ L LGY L
Sbjct: 101 SSTLSNYFLSCNRNKRSLTLNLKKPDGAQILKKLVAKSDVLIENFIVGKMEELGLGYDTL 160
Query: 327 SEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLAT 386
EIN +LIY S++G+G+ GP GYD+IAA+ G + ITG PDGPP K G+A D+ T
Sbjct: 161 REINPKLIYSSISGYGTTGPKAKAAGYDVIAAAESGFMSITGEPDGPPMKTGVAICDIMT 220
Query: 387 GLYAHGAVMAALLHK-----YKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGT 441
GL+A ++A+L + GQK++ +L + +S+ NVG+++LN+G E +RWGT
Sbjct: 221 GLHAAIGILASLYSRDGGPDGARRSGQKVESSLFESALSLSFNVGSSFLNSGEEAQRWGT 280
Query: 442 SHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
SH ++VP+Q F+ +GY+ IGT +++Q++ +CK + L+ L LD R+ T +
Sbjct: 281 SHPSIVPYQAFEAQDGYMIIGTTNNRQFEKLCKTLELEELKLDSRFGTNS 330
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 2/129 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK + L+ L LD R+ T + RV+NR L + + + + EW+ + P ++VN
Sbjct: 311 LCKTLELEELKLDSRFGTNSQRVKNRVELIEILGERLKSRPASEWVEKLNDLGLPCSRVN 370
Query: 61 SISQVFADEHIQDIKLVKEI--SHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
SI + F ++++E+ H G I ++G + S + +R+ PPAL EHT +
Sbjct: 371 SIQEAFQQPQTHARQMIQEMDCDHSSSGKIHLIGTPIKLSESPLTIRSAPPALSEHTKEI 430
Query: 119 LKDLLNYDE 127
L DL DE
Sbjct: 431 LADLEYTDE 439
>gi|427423576|ref|ZP_18913725.1| CoA-transferase family III protein [Acinetobacter baumannii WC-136]
gi|425699600|gb|EKU69208.1| CoA-transferase family III protein [Acinetobacter baumannii WC-136]
Length = 409
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 130/281 (46%), Positives = 180/281 (64%), Gaps = 9/281 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L +R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPP++ N T S
Sbjct: 4 LQGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPRVGDDTRMWGPPWMPDHDGNMTRES 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF C NRNK SV VD TPEGQ +I ++ K DV++EN+ G L + L Y LSE+N
Sbjct: 64 GYFQCTNRNKYSVAVDITTPEGQALIYEIVKTADVVIENYKTGSLAKYGLDYASLSELNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
+IYCS+TGFG GP + PGYD I + GL+ ITG PD G KVG+A +D+ TG
Sbjct: 124 NIIYCSITGFGQDGPRAEEPGYDFIIQGMSGLMSITGEPDEVAGGGAQKVGVAVVDIQTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AAL+ + TG+GQ ID +LL QV+ L N G NYL + +R G H ++V
Sbjct: 184 LYSTIAIQAALIARSHTGRGQYIDMSLLDVQVAALANQGMNYLASNKAPQRMGNQHPSIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYL 488
P+Q FK + I G+DKQ++D+C + L + +++
Sbjct: 244 PYQTFKAKDKEFIIACGNDKQFKDLCIAIGYPELLENEKFV 284
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 2/139 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L + +++ RV+ R L + ++KT +EW+ + + P +N
Sbjct: 268 LCIAIGYPELLENEKFVRNQDRVKYRNELIPLLSEHFLQKTAKEWVDMIHALKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI A+ I LV I H + + +G + S T E PP LGEHT +L
Sbjct: 328 SIEDALAEPQIVHRNLVVNIPHRLNENFQTIGSPIKLSDTPVEYHHAPPELGEHTAQILS 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
+E +A LKEK I+
Sbjct: 388 RFKTAEE--LAALKEKGII 404
>gi|326317979|ref|YP_004235651.1| formyl-CoA transferase [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323374815|gb|ADX47084.1| Formyl-CoA transferase [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 435
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 132/298 (44%), Positives = 192/298 (64%), Gaps = 13/298 (4%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
L+ +R+LDL+R++AGP+CT +LADLGA+V+KVE+P GD+ R+WGPPFL + T+ +
Sbjct: 22 LAGIRVLDLSRVLAGPWCTQVLADLGADVVKVERPGLGDDTRQWGPPFLKDAEGRETDQA 81
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YFT NRNK+S+ +D PEGQ +++D+A + DV+VENF G L + L ++ L +N
Sbjct: 82 AYFTACNRNKRSITIDMAHPEGQALLRDMALRADVVVENFKVGGLKQYGLDHESLRALNP 141
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+LIYCSVTGFG GPY R GYD++ ++ GL+ ITG P G P +VG+A IDL TG
Sbjct: 142 RLIYCSVTGFGQDGPYAPRAGYDLMVQAMTGLMDITGRADGEPGGGPLRVGVAVIDLFTG 201
Query: 388 LYAHGAVMAALLHK----YKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSH 443
LYA A++AAL + TG+GQ ID LL +++L N A +L+ G +R G SH
Sbjct: 202 LYASNAILAALHARDNAATGTGQGQHIDMALLDVGMAVLANQAAGFLSTGESPRRQGNSH 261
Query: 444 ANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
++VP+Q F T++G + + G+D Q+ C A DPR+ T L + + L+
Sbjct: 262 PSLVPYQDFPTADGAMLLAIGNDGQFARFCMAAGQAAWASDPRFSTNTLRVRHRAELV 319
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 9/147 (6%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C A DPR+ T LRV +R L +EA T +TT +W+ + + + P +N
Sbjct: 290 FCMAAGQAAWASDPRFSTNTLRVRHRAELVPLVEAVTRTRTTAQWVALLEDKAVPCGPIN 349
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGD--------IKIVGPAVAYSLTQPEVRTPPPALG 112
SI+Q F D ++ L E+ G ++ V + S T P +R PPALG
Sbjct: 350 SIAQAFDDPQVRARGLAVELPRRPDGSAGADGIATVRGVASPMRLSATPPVLRNAPPALG 409
Query: 113 EHTDYVLKDLLNYDETTIAKLKEKKIL 139
+HT+ +L D L D +A+L++ ++
Sbjct: 410 QHTEEILAD-LGLDAAAVARLRDAGVV 435
>gi|194292983|ref|YP_002008890.1| formyl-CoA transferase [Cupriavidus taiwanensis LMG 19424]
gi|193226887|emb|CAQ72838.1| putative formyl-CoA transferase [Cupriavidus taiwanensis LMG 19424]
Length = 387
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 132/284 (46%), Positives = 179/284 (63%), Gaps = 11/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-------NTE 269
L VR+LDL+RI+AGP+CT LADLGAEV KVE P GD+ R WGPP+L+ +
Sbjct: 6 LEGVRVLDLSRILAGPWCTQNLADLGAEVTKVEYPERGDDTRGWGPPYLDAPAGSVGDPR 65
Query: 270 LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEI 329
LS YF C NR K+SV +D+ +PEG +++LA+ DVLVEN+ G L R L Y L I
Sbjct: 66 LSGYFICCNRGKRSVAIDYGSPEGAAQVRELARDADVLVENYKVGTLRRYGLDYDTLKAI 125
Query: 330 NSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLA 385
N +L+Y S+TGFG GP D+PGYD + +GGL+ TG PDG P + G+A +DL+
Sbjct: 126 NPRLVYLSITGFGQSGPMADKPGYDYVFQGMGGLMSYTGQPDGTPGAGPLRTGVAVVDLS 185
Query: 386 TGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHAN 445
TG+YA AV+AAL + +TG G +D LL V+M N ANYL +G +R G +H N
Sbjct: 186 TGMYATSAVLAALYQRQQTGVGAHLDIALLDVAVAMNANQAANYLVSGQNPQRSGNAHPN 245
Query: 446 VVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P++VF+ ++G++ + G+D Q+ C V LA DP Y T
Sbjct: 246 CAPYEVFRCADGHLILAIGNDSQFARFCAVAGTPALAQDPCYAT 289
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C V LA DP Y T + R+E+ E L ++ A +T W F P+ ++
Sbjct: 272 FCAVAGTPALAQDPCYATNSARIEHLEALRAQLTALFPTRTRAAWTEAFDAAGVPWGPIH 331
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIV 91
++ +VFA ++ KL++ H G + +V
Sbjct: 332 TMDEVFAHPQVRHRKLMQVAEHPVMGRVPMV 362
>gi|355353805|gb|AER61714.1| CoA-transferase family III [Advenella mimigardefordensis DPN7]
Length = 399
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 124/278 (44%), Positives = 178/278 (64%), Gaps = 5/278 (1%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
L+ +++LDL+RI+AGP LL DLGA+V+KVE+P+ GD+ RKWGPP++ + T+ S
Sbjct: 9 LAGIKVLDLSRILAGPTAAQLLGDLGADVVKVEKPLEGDDTRKWGPPYVADRSGEKTDES 68
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ C NRNK+S+ +D + GQ+ + L DVL+EN+ G L + L Y + +
Sbjct: 69 AYYLCANRNKRSIAIDITSASGQKRVHQLMAHTDVLIENYKVGGLSKYGLAYDQIKDRYP 128
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
LIYCSVTGFG GPY RPGYD + +GG++ +TG P G P KVG+ D+ TG+YA
Sbjct: 129 DLIYCSVTGFGQTGPYAARPGYDFLIQGMGGIMSLTGEPQGTPMKVGVGIADVMTGMYAA 188
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
++AAL H+ +TG+GQ ID LL TQ++ L+N G NYL +R G H N+VP+QV
Sbjct: 189 VGILAALRHREQTGQGQHIDIALLDTQIAWLVNGGTNYLTDRKRPERLGNGHPNIVPYQV 248
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
F T++ + + G+D Q++ C+V LA D RY T
Sbjct: 249 FSTADAPMILAVGNDAQFRRFCQVAGEASLASDERYAT 286
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 2/131 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V LA D RY T +RV +R LC+ ++ ++T WL + + P VN
Sbjct: 269 FCQVAGEASLASDERYATNIMRVRHRIELCRLVDNALRKRTRSHWLQTLEAANVPCGPVN 328
Query: 61 SISQVFADEHI--QDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
S+ +VFAD + + +L G I ++ + S T P PPP L EH V
Sbjct: 329 SLEEVFADPQVIARGAQLTMPCEWAAGGQISLLANPLKMSATPPTYNRPPPRLNEHEAEV 388
Query: 119 LKDLLNYDETT 129
L D L +TT
Sbjct: 389 LADWLKTCKTT 399
>gi|410474234|ref|YP_006897515.1| hypothetical protein BN117_3748 [Bordetella parapertussis Bpp5]
gi|408444344|emb|CCJ51081.1| conserved hypothetical protein [Bordetella parapertussis Bpp5]
Length = 402
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 131/279 (46%), Positives = 176/279 (63%), Gaps = 9/279 (3%)
Query: 222 ILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE-----LSTYFTC 276
+LDLTRI+AGP+CT +LAD GA VIKVE+P GD+ R WGPP++ + STYF
Sbjct: 2 VLDLTRILAGPWCTQILADFGARVIKVERPGVGDDTRSWGPPWMPGADGEQARHSTYFAA 61
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
NRNK+SV VD T EGQ+I++ LA + DVL+ENF G L L Y LS +N +L+YC
Sbjct: 62 ANRNKQSVSVDIATAEGQEIVRALAMRADVLIENFKVGDLACHGLDYASLSAVNPRLVYC 121
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITG----HPDGPPCKVGIASIDLATGLYAHG 392
S+TG+G GPY DRPGYD+I GGL+ +TG P G P KVG+A D+ TG+YA
Sbjct: 122 SITGYGQTGPYADRPGYDLIFQGEGGLMSVTGERDDRPGGGPQKVGVAIADIVTGMYASS 181
Query: 393 AVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVF 452
AV+AAL + TG GQ ID LL + N+ N++ G R+G +H +VP++V
Sbjct: 182 AVLAALQRRAATGAGQYIDIALLDCMAAFGANLAFNHVATGAVPPRYGNAHPTLVPYEVL 241
Query: 453 KTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
S+G+V + G+D Q++ C + LA D RY TG+
Sbjct: 242 AASDGHVIVAAGNDAQWRRFCAALGRPDLAADARYATGS 280
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 59/140 (42%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C + LA D RY TG+ R+ +R+ L EI + WL P ++N
Sbjct: 261 FCAALGRPDLAADARYATGSGRIVHRDALMPEIARTFATEPAAHWLAQLTEHGIPNGRIN 320
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
QVF + + E+ + + V V +S + R PALG+HT VL
Sbjct: 321 DYKQVFEHPQLLHRGMRVEMPDGEGNPVAGVANPVKFSASAVAYRHAAPALGQHTREVLC 380
Query: 121 DLLNYDETTIAKLKEKKILG 140
LL DE + L + +LG
Sbjct: 381 GLLRMDEARVQALAARGVLG 400
>gi|328950136|ref|YP_004367471.1| formyl-CoA transferase [Marinithermus hydrothermalis DSM 14884]
gi|328450460|gb|AEB11361.1| Formyl-CoA transferase [Marinithermus hydrothermalis DSM 14884]
Length = 399
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 130/286 (45%), Positives = 177/286 (61%), Gaps = 3/286 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL +R+LDL+RI+AGP CT +LADLGAEV K+E P GD+ R+WGPPF S Y+
Sbjct: 3 PLEGIRVLDLSRILAGPVCTQILADLGAEVWKLESP-WGDDTRRWGPPFQEGE--SAYYL 59
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
NR KKSV V+ K P GQ ++++LA + DVLVENF G L R L Y L+ +N L+Y
Sbjct: 60 SANRGKKSVAVNLKDPRGQALVRELAARADVLVENFKAGTLARYGLDYASLAPLNPGLVY 119
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TGFG GP PGYD+ I G++ ITG PDGPP KVG+A ID+ TGLYA ++
Sbjct: 120 CSITGFGQTGPRAQEPGYDVALQGITGIMSITGEPDGPPVKVGVAWIDVLTGLYAAIGIL 179
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
AL + +GKGQ ID L ++ L+N YL G R G++H +VP+Q F+
Sbjct: 180 TALWERASSGKGQYIDLALFDVGLASLVNQAQAYLMTGEVPGRLGSAHPQIVPYQAFQAQ 239
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
+ + + G+D+QY+ M + + L DPR+ T A +A L+
Sbjct: 240 DKWFILAVGNDEQYRRMTEAIQHPELWEDPRFQTNAGRVAHREALV 285
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 57/125 (45%), Gaps = 1/125 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
M + + L DPR+ T A RV +RE L + A + + WL +F P VN
Sbjct: 256 MTEAIQHPELWEDPRFQTNAGRVAHREALVGRLAAIFRTRPRQAWLEVFHQAGVPATPVN 315
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVG-PAVAYSLTQPEVRTPPPALGEHTDYVL 119
+++ FAD ++ ++H G + +V P S T PPP LGEHT VL
Sbjct: 316 DLAEAFADPQAAARGVLWRVAHPTLGALPLVANPLQFMSRTPAAPAGPPPLLGEHTRQVL 375
Query: 120 KDLLN 124
+L
Sbjct: 376 GAVLG 380
>gi|392379609|ref|YP_004986768.1| putative L-carnitine dehydrogenase [Azospirillum brasilense Sp245]
gi|356881976|emb|CCD02975.1| putative L-carnitine dehydrogenase [Azospirillum brasilense Sp245]
Length = 431
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 127/286 (44%), Positives = 184/286 (64%), Gaps = 11/286 (3%)
Query: 215 LPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE----- 269
+ L+ +R+LDL+R++AGP+ + +L DLGA++IK+E P GD+ R WGPP L T
Sbjct: 19 MSLAGLRVLDLSRVLAGPWASQILGDLGADIIKIEHPEKGDDTRSWGPPNLRPTPGDRTD 78
Query: 270 --LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLS 327
S Y+ NRNK+S+ +D PEG +++ LA+ CDV++ENF G L R L Y+ L
Sbjct: 79 DPPSAYYLSCNRNKRSLAIDIAKPEGAALVRRLARSCDVVLENFKVGGLSRYGLDYESLK 138
Query: 328 EINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPP----CKVGIASID 383
N L+YCS+TGFG GPY R GYD + + GL+ +TG P+G P KVG+ D
Sbjct: 139 RENPALVYCSITGFGQTGPYAPRGGYDFLIQGMSGLMSVTGQPEGAPGSEPLKVGVPVSD 198
Query: 384 LATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSH 443
L TGLYA AV+AAL H+ + G+GQ IDC LL TQV++L N G N+L G KR G H
Sbjct: 199 LFTGLYATIAVLAALRHRDRAGEGQHIDCALLDTQVAVLANQGMNWLVGGQVPKRLGNGH 258
Query: 444 ANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
NVVP++ F T++G++ + G+D Q++ +C+++N + L D R+ +
Sbjct: 259 PNVVPYRCFATADGHIIVAVGNDGQFRALCRLLNREDLLADERFAS 304
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 62/144 (43%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+++N + L D R+ + R +R L + T+ + + G P +N
Sbjct: 287 LCRLLNREDLLADERFASNPGRQAHRAELEATLADSMARWTSADLIEALSGGGVPAGPIN 346
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I QVF D + LV + + IVG S T R PP LGE TD VL
Sbjct: 347 RIDQVFDDPQVVARGLVHRLETPGGTPVPIVGFPARLSRTPACYRRVPPRLGEQTDEVLS 406
Query: 121 DLLNYDETTIAKLKEKKILGLIER 144
DLL+ + +L+ ++G R
Sbjct: 407 DLLDLTGNELEELRAGGVIGTAGR 430
>gi|126736225|ref|ZP_01751968.1| Putative acyl-CoA transferase/carnitine dehydratase [Roseobacter
sp. CCS2]
gi|126714391|gb|EBA11259.1| Putative acyl-CoA transferase/carnitine dehydratase [Roseobacter
sp. CCS2]
Length = 373
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 127/281 (45%), Positives = 182/281 (64%), Gaps = 3/281 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNT--ELSTY 273
PL+ +++++L R++AGP LADLGAEVIK+E GD+ R+WGPPF+++ + + Y
Sbjct: 3 PLAGLKVIELARVLAGPLAGQTLADLGAEVIKIES-AEGDDTRQWGPPFVDHDGEKSAAY 61
Query: 274 FTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQL 333
F C NR KKSV +D +TPEGQ ++ L D+L+ENF G L + L Y LS +N +L
Sbjct: 62 FHCCNRGKKSVVIDLRTPEGQAQVRKLIADADILIENFKVGGLAKYGLDYTSLSALNPRL 121
Query: 334 IYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGA 393
IYCS+TGFG GPY R GYD I + GL+ +TG PDG P KVG+A D+ TG+YA
Sbjct: 122 IYCSITGFGQDGPYAKRAGYDYIIQGMSGLISVTGPPDGQPQKVGVAVTDIFTGIYACTG 181
Query: 394 VMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFK 453
++AA+ ++ TGKGQ ID L+ +++ N NYL G +R G +H N+VP+QVF
Sbjct: 182 ILAAVNQRHTTGKGQHIDMALMDVATAVMTNQAMNYLATGNAPQRLGNAHPNIVPYQVFD 241
Query: 454 TSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALIL 494
++G++ + +G+D QYQ C +++L LA P Y T A L
Sbjct: 242 CADGHIIVASGNDGQYQQFCTLLDLPDLARHPDYATNAARL 282
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C +++L LA P Y T A R++NR+ L + AKT T + L + P +N
Sbjct: 260 FCTLLDLPDLARHPDYATNAARLKNRDALTLSLTAKTQRWTKADLLAACEEHGVPAGPIN 319
Query: 61 SISQVFADEHI 71
++ + FAD I
Sbjct: 320 NLDETFADPQI 330
>gi|335040179|ref|ZP_08533314.1| L-carnitine dehydratase/bile acid-inducible protein F
[Caldalkalibacillus thermarum TA2.A1]
gi|334179931|gb|EGL82561.1| L-carnitine dehydratase/bile acid-inducible protein F
[Caldalkalibacillus thermarum TA2.A1]
Length = 395
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 126/273 (46%), Positives = 182/273 (66%), Gaps = 2/273 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L+ VR+LDL+R++AGPF TM+L DLGAEVIKVE P D+ R WGPPF S Y+ C
Sbjct: 5 LNGVRVLDLSRVLAGPFSTMILGDLGAEVIKVEAPGGSDDTRAWGPPFKGGE--SAYYLC 62
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
NRNKK++ ++ KT EG+ ++K L + DVL+ NF G +++ LGY+ L ++N +LIYC
Sbjct: 63 TNRNKKAITLNLKTEEGKAVLKRLVVESDVLIHNFKYGTMEKWQLGYEDLKKLNPRLIYC 122
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S+TGFGS GPYK+ GYD I ++ GL+ ITG + P KVG+A D+ TGLYA + +
Sbjct: 123 SITGFGSTGPYKELAGYDYIIQAMSGLMSITGSEESGPLKVGVAITDVITGLYAVIGITS 182
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
AL + ++G+GQ ID L + VS L+NV +NYL +G K G H N+VP+Q F T +
Sbjct: 183 ALYERERSGEGQSIDLALFDSAVSALVNVASNYLISGQLPKLLGNHHPNIVPYQTFPTKD 242
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
G + + G+D+Q++ +C ++ + A D R+ T
Sbjct: 243 GEMVVAVGNDRQFKKLCTLIGKEEWAQDERFAT 275
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 69/139 (49%), Gaps = 1/139 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ + A D R+ T RV +R L + +KT EW + P +N
Sbjct: 258 LCTLIGKEEWAQDERFATNDQRVRHRYELEALLSEVFKQKTAAEWRDLLNQEGIPCGPIN 317
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ ++F D + ++V + H GDI++VG + S T + R PPP GEHT VL+
Sbjct: 318 NMKELFHDPQVAAREMVVSMQHPTAGDIRLVGSPLKLSRTPVQFRCPPPRAGEHTREVLR 377
Query: 121 DLLNYDETTIAKLKEKKIL 139
DL D I LKEK IL
Sbjct: 378 DLGIADR-EIEALKEKGIL 395
>gi|33603650|ref|NP_891210.1| CaiB/BaiF family protein [Bordetella bronchiseptica RB50]
gi|33577775|emb|CAE35040.1| CaiB/BaiF family protein [Bordetella bronchiseptica RB50]
Length = 402
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 126/286 (44%), Positives = 180/286 (62%), Gaps = 2/286 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL +R+LDLTR+++GPFCTMLL DLGAEVIK+E+PV GD+ R +GPPF S YF
Sbjct: 3 PLHGIRVLDLTRVVSGPFCTMLLGDLGAEVIKIEEPVHGDDSRAFGPPFSGGE--SAYFL 60
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNK+S +D K PEG+++++ LA+ DV+++NF PG + RL LGY L N +L+
Sbjct: 61 SVNRNKRSCAIDLKQPEGKELLRALARASDVVIDNFRPGTMARLGLGYDALRAANPRLVS 120
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TGFG GP RPGYD+I G++ ITG P G P K+G + DL TG +A A+
Sbjct: 121 CSITGFGDSGPDAQRPGYDLIIQGESGIMDITGDPAGLPTKIGTSIADLITGQFASQAIT 180
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
AALL + +G+G+ + +L S+L Y G R G +H + P++ F+ +
Sbjct: 181 AALLERASSGQGRHVGIAMLDCMASLLTFNAGIYFTTGASPTRRGNAHPTIAPYETFQAA 240
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
+G++ IG +DK +Q C V+ LA DPRY A +A+ + L+
Sbjct: 241 DGWLNIGVANDKFWQLFCGVIARPDLADDPRYARAADRVALRAELV 286
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 55/139 (39%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C V+ LA DPRY A RV R L I A K W+ + P +
Sbjct: 257 FCGVIARPDLADDPRYARAADRVALRAELVPRIAALIAAKPRAYWIAALREAGVPCGDIR 316
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
S+++V E + +V ++ H G ++ + + PP LGEHT +L
Sbjct: 317 SVAEVCEAEQLVSRGMVFDMPHPSAGQVRNIASPFRFDGAGTAAHRAPPLLGEHTAAILC 376
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ +A L + I+
Sbjct: 377 EHAGLRPERVADLAARGII 395
>gi|334141032|ref|YP_004534238.1| L-carnitine dehydratase/bile acid-inducible protein F
[Novosphingobium sp. PP1Y]
gi|333939062|emb|CCA92420.1| L-carnitine dehydratase/bile acid-inducible protein F
[Novosphingobium sp. PP1Y]
Length = 379
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 130/278 (46%), Positives = 183/278 (65%), Gaps = 5/278 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL----NNTELS 271
PLS VR+L+L RI+AGP+C LLADLGAEVIK+E+PV+GD+ R WGPPF+ +
Sbjct: 4 PLSGVRVLELARILAGPWCGQLLADLGAEVIKIERPVSGDDTRHWGPPFVISDSGENLGA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NR K+S+ VD +P GQQ++++LA D+++EN+ G L + L + LS N
Sbjct: 64 AYYHSTNRGKRSIAVDIASPAGQQLVRELAASADIVIENYKVGGLKKYGLDHPALSAPNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+LI CS+TGFG GPY RPGYD IA ++GGL+ +TG P K GIA DL TG+Y+
Sbjct: 124 RLITCSITGFGQTGPYAHRPGYDYIAQAMGGLMSMTGEAGRQPQKAGIAVADLFTGVYSA 183
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A++AAL +++TG G ID LL TQVS++ N N++ +G +R G HAN+VP+Q
Sbjct: 184 VAILAALNRRHETGLGAHIDMALLDTQVSVMANQALNWMTSGTVPRRVGNGHANLVPYQA 243
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
F TS+G + I G+D Q+ +C+V+ L D R+ T
Sbjct: 244 FPTSDGDLVIAVGNDGQFASLCRVLG-TGLDNDARFAT 280
>gi|150376806|ref|YP_001313402.1| L-carnitine dehydratase/bile acid-inducible protein F
[Sinorhizobium medicae WSM419]
gi|150031353|gb|ABR63469.1| L-carnitine dehydratase/bile acid-inducible protein F
[Sinorhizobium medicae WSM419]
Length = 393
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 131/280 (46%), Positives = 178/280 (63%), Gaps = 5/280 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL----S 271
PL +R+L+L RI+AGP+ LADLGA+VIKVE P GD+ R WGPPF+ +
Sbjct: 4 PLKGIRVLELARILAGPWIGQTLADLGADVIKVESP-AGDDTRSWGPPFVQGEGGERLDA 62
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NR K+SV +DF T EGQ+ ++ LA Q DVL+ENF G L + L Y+ L ++N
Sbjct: 63 AYFHACNRGKRSVVLDFTTEEGQEAVRRLASQSDVLLENFKVGGLAKYGLDYESLRKVNP 122
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+LIYCSVTGFG +GPY R GYD I + G++ +TG PDG P K+G+A D+ TGLY
Sbjct: 123 RLIYCSVTGFGQEGPYAHRAGYDYIVQGMSGIMDLTGEPDGEPQKIGVAFADIFTGLYGV 182
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
AV AAL + + G GQ ID LL +L N N+L +G +R G +H N+ P+QV
Sbjct: 183 IAVQAALAQRERNGAGQHIDMALLDCMTGVLANQALNFLVSGKAPRRLGNAHPNIAPYQV 242
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
F TS+G++ + G+D+Q+ C+++ LA DPRY T A
Sbjct: 243 FPTSDGHLIVAVGNDRQFVKFCELLGRPDLASDPRYRTNA 282
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 62/135 (45%), Gaps = 24/135 (17%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+++ LA DPRY T A RV+NR+ L E+ A+T + + L + P +N
Sbjct: 263 FCELLGRPDLASDPRYRTNADRVQNRDSLTPELAAETAKFERDTLLARLEASGVPGGPIN 322
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTP------------- 107
+++ VFAD I ++ E H A + T P +RTP
Sbjct: 323 TVADVFADPQIIHRQMRVETPHTG-----------AATGTSPGIRTPIRFSDAALALERG 371
Query: 108 PPALGEHTDYVLKDL 122
P LGEHT+ VL ++
Sbjct: 372 VPRLGEHTEEVLAEI 386
>gi|427816661|ref|ZP_18983725.1| CaiB/BaiF family protein [Bordetella bronchiseptica 1289]
gi|410567661|emb|CCN25232.1| CaiB/BaiF family protein [Bordetella bronchiseptica 1289]
Length = 402
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 126/286 (44%), Positives = 180/286 (62%), Gaps = 2/286 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL +R+LDLTR+++GPFCTMLL DLGAEVIK+E+PV GD+ R +GPPF S YF
Sbjct: 3 PLHGIRVLDLTRVVSGPFCTMLLGDLGAEVIKIEEPVHGDDSRAFGPPFSGGE--SAYFL 60
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNK+S +D K PEG+++++ LA+ DV+++NF PG + RL LGY L N +L+
Sbjct: 61 SVNRNKRSCAIDLKQPEGKELLRALARASDVVIDNFRPGTMARLGLGYDALRAANPRLVS 120
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TGFG GP RPGYD+I G++ ITG P G P K+G + DL TG +A A+
Sbjct: 121 CSITGFGDSGPDAQRPGYDLIIQGESGIMDITGDPAGLPTKIGTSIADLITGQFASQAIT 180
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
AALL + +G+G+ + +L S+L Y G R G +H + P++ F+ +
Sbjct: 181 AALLERASSGQGRHVGIAMLDCMASLLTFNAGIYFTTGASPTRRGNAHPTIAPYETFQAA 240
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
+G++ IG +DK +Q C V+ LA DPRY A +A+ + L+
Sbjct: 241 DGWLNIGVANDKFWQLFCGVIARPDLADDPRYARAADRVALRAELV 286
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 55/139 (39%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C V+ LA DPRY A RV R L I A K W+ + P +
Sbjct: 257 FCGVIARPDLADDPRYARAADRVALRAELVPRIAALIAAKPRAYWIAALREAGVPCGDIR 316
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
S+++V E + +V ++ H G ++ + + PP LGEHT +L
Sbjct: 317 SVAEVCEAEQLVSRGMVFDMPHPSAGQVRNIASPFRFDGAGTAAHRAPPLLGEHTAAILC 376
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ +A L + I+
Sbjct: 377 EHAGLQPERVADLAARGII 395
>gi|34499372|ref|NP_903587.1| L-carnitine dehydrogenase-like protein [Chromobacterium violaceum
ATCC 12472]
gi|34105222|gb|AAQ61578.1| probable L-carnitine dehydrogenase-like protein [Chromobacterium
violaceum ATCC 12472]
Length = 396
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 129/285 (45%), Positives = 183/285 (64%), Gaps = 1/285 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
LS ++++DL+R++AGP+ + LLADLGAEVIK+E+P +GD+ R+W PP L + + YF C
Sbjct: 5 LSGIKVVDLSRVLAGPWASQLLADLGAEVIKIEKPGSGDDTRQWAPPSLPDGR-AAYFLC 63
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
NR K+S+ VD P GQ+I++ L DV++EN+ G L + L Y L +N +L+YC
Sbjct: 64 TNRGKRSLTVDIAQPAGQEIVRKLVADADVVLENYKVGGLRKYGLDYDSLKAVNPRLVYC 123
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S+TGFG GPY GYD I + GL+ ITG DG P KVG+A DL TGLYA AV A
Sbjct: 124 SITGFGQTGPYASLAGYDYIVQGMSGLMSITGPADGEPHKVGVAVSDLFTGLYAANAVQA 183
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
AL+ + +TG GQ ID L ++ML NV +N+L R G +HAN+VP+QVF S+
Sbjct: 184 ALIARERTGAGQHIDMALFDCSLAMLANVASNWLVGHNVPPRLGNAHANIVPYQVFAASD 243
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
G+ + G+DKQ+ ++C+++ A DPRY T +A L+
Sbjct: 244 GHFILACGNDKQFAEVCRLVGQAQWARDPRYATNPQRVAHRVQLV 288
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 1/134 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+++ A DPRY T RV +R L + + WL P +N
Sbjct: 259 VCRLVGQAQWARDPRYATNPQRVAHRVQLVPLLAQAFRHHGRDYWLSALDKAGVPCGPIN 318
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++++ FAD Q ++ ++ + + +VG + S T E PP LGEHT+ +L+
Sbjct: 319 NVAEAFADPQAQARQMQLDMRDDAGRQVPLVGCPIKLSGTPVEYNLAPPELGEHTEQILR 378
Query: 121 DLLNYDETTIAKLK 134
L Y ++ I L+
Sbjct: 379 -ALGYVDSDIVALR 391
>gi|410474723|ref|YP_006898004.1| CaiB/BaiF family protein [Bordetella parapertussis Bpp5]
gi|408444833|emb|CCJ51611.1| CaiB/BaiF family protein [Bordetella parapertussis Bpp5]
Length = 402
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 126/286 (44%), Positives = 180/286 (62%), Gaps = 2/286 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL +R+LDLTR+++GPFCTMLL DLGAEVIK+E+PV GD+ R +GPPF S YF
Sbjct: 3 PLHGIRVLDLTRVVSGPFCTMLLGDLGAEVIKIEEPVHGDDSRAFGPPFSGGE--SAYFL 60
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNK+S +D K PEG+++++ LA+ DV+++NF PG + RL LGY L N +L+
Sbjct: 61 SVNRNKRSCAIDLKQPEGKELLRALARASDVVIDNFRPGTMARLGLGYDALRAANPRLVS 120
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TGFG GP RPGYD+I G++ ITG P G P K+G + DL TG +A A+
Sbjct: 121 CSITGFGDSGPDAQRPGYDLIIQGESGIMDITGDPAGLPTKIGTSIADLITGQFASQAIT 180
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
AALL + +G+G+ + +L S+L Y G R G +H + P++ F+ +
Sbjct: 181 AALLERASSGQGRHVGIAMLDCMASLLTFNAGIYFTTGASPTRRGNAHPTIAPYETFQAA 240
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
+G++ IG +DK +Q C V+ LA DPRY A +A+ + L+
Sbjct: 241 DGWLNIGVANDKFWQLFCGVIARPDLADDPRYARAADRVALRTELV 286
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 55/139 (39%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C V+ LA DPRY A RV R L I A K W+ + P +
Sbjct: 257 FCGVIARPDLADDPRYARAADRVALRTELVPRIAALIAAKPRAYWIAALREAGVPCGDIR 316
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
S+++V E + +V ++ H G ++ + + PP LGEHT +L
Sbjct: 317 SVAEVCEAEQLVSRGMVFDMPHPSAGQVRNIASPFRFDGAGTAAHRAPPLLGEHTAAILC 376
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ +A L + I+
Sbjct: 377 EHAGLRPERVADLAARGII 395
>gi|398905790|ref|ZP_10653112.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM50]
gi|398174096|gb|EJM61903.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM50]
Length = 412
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 131/284 (46%), Positives = 181/284 (63%), Gaps = 9/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L R+LDL+R++AGP+C +LADLGAEVIK+E+P GD+ R WGPPF+ +++ +
Sbjct: 4 LKGYRVLDLSRVLAGPWCGQILADLGAEVIKIERPSVGDDTRAWGPPFMKKEDGSDSSEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+Y+ NRNK SV V+ T EGQ+I++ LA +CDVL+EN+ G L++ L YK LSEIN
Sbjct: 64 SYYQSTNRNKLSVAVNIATEEGQEIVRALATECDVLIENYKAGSLEKYGLDYKSLSEINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPC----KVGIASIDLATG 387
QL+YCS+TGFG GP + PGYD I +GGL+ ITG DG P KVG+A D+ TG
Sbjct: 124 QLVYCSITGFGHTGPRAEEPGYDFIIQGMGGLMSITGEKDGVPGAGPQKVGVAVADVMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AAL+ + TG+GQ D LL QV+ L N NYL+ R G +H N+V
Sbjct: 184 LYSTIAIQAALISRQSTGRGQHCDMALLDVQVAALGNQSQNYLSTSESPGRQGNAHVNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P+QVF ++ I G+D Q+ +C + L DP++ A
Sbjct: 244 PYQVFTANDMDFIIACGNDSQFVALCNAIGKPELPSDPKFTKNA 287
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 69/146 (47%), Gaps = 3/146 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L DP++ A RV NRE + + + + T + W+ V P +N
Sbjct: 268 LCNAIGKPELPSDPKFTKNADRVRNREAIVQILANHFLTDTADNWVSRIHAVKVPVGVIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I + + + ++ + H++ ++VG + S T + +P P LGEHT+ VLK
Sbjct: 328 DIGRALNEPQVLARNMLINLPHKQNPGFQMVGSPIKLSHTPVQHLSPAPRLGEHTNRVLK 387
Query: 121 DLLNYDETTIAKLKEKKILGLIERLT 146
L +E +A+L + G+IE+
Sbjct: 388 AALGMNEARLAELTAQ---GVIEQFV 410
>gi|221640953|ref|YP_002527215.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhodobacter
sphaeroides KD131]
gi|221161734|gb|ACM02714.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhodobacter
sphaeroides KD131]
Length = 381
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 123/289 (42%), Positives = 184/289 (63%), Gaps = 3/289 (1%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN--NTELS 271
S PL+ +R+++L RI+AGP+ +LADLGA+V+KVE P GD+ R+WGPPF+ +
Sbjct: 2 SAPLAGIRVVELARILAGPWAGQVLADLGADVVKVEAP-EGDDTRRWGPPFIEREGDHSA 60
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NR K+SV DF+TPEGQ+ ++ L DV++ENF G L + L + L ++N
Sbjct: 61 AYFHAANRGKRSVTADFRTPEGQETVRRLVADADVVIENFKVGGLAKYGLDWPSLQKVNP 120
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+L+YCS+TGFG GPY R GYD I + GL+ +TG +G P KVG+A D+ TG+YA
Sbjct: 121 RLVYCSITGFGQDGPYAHRAGYDFIIQGMAGLMSVTGAAEGQPQKVGVAVTDIFTGIYAA 180
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A++AAL + TG+GQ++D L+ ++ N NYL G+ ++ G H N+ P+ V
Sbjct: 181 TAILAALHQRAGTGRGQQVDMALMDVAAGVMANQAMNYLATGVAPRKMGNEHPNLAPYAV 240
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHL 500
F ++G++ I TG+D QY+ +C ++ L LA P +LT A +A + L
Sbjct: 241 FDCADGWIIIATGNDAQYRRLCTLLGLPGLATAPAFLTNADRVANRAEL 289
>gi|403511180|ref|YP_006642818.1| coA-transferase III family protein [Nocardiopsis alba ATCC
BAA-2165]
gi|402802078|gb|AFR09488.1| coA-transferase III family protein [Nocardiopsis alba ATCC
BAA-2165]
Length = 427
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 125/290 (43%), Positives = 186/290 (64%), Gaps = 9/290 (3%)
Query: 209 SSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNT 268
S+ + LPL+ VRI DL+R++AGP+ TMLLAD+GAEV+K+EQP GD+ R WGPP+ T
Sbjct: 8 STTDAPLPLAGVRIADLSRVLAGPYATMLLADMGAEVVKIEQPGRGDDTRSWGPPYAAPT 67
Query: 269 EL---------STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRL 319
E + YF VNRNK+S+ VD K PEG +++L DV+++NF PG +DRL
Sbjct: 68 EEHEAAHSPGEAAYFLSVNRNKRSLAVDLKDPEGLAAVQELCASSDVVIQNFRPGVIDRL 127
Query: 320 NLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGI 379
LGY+ +SE N ++YCSV+GFG + RPG+DI+ + GL+ TG +GP KVG+
Sbjct: 128 GLGYERISERNPAVVYCSVSGFGPEHEPTGRPGFDIVVQAESGLMATTGPAEGPASKVGV 187
Query: 380 ASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRW 439
A D+ TGL A ++ AL+ +TG+G++I +L+++ +S L+N+ L E R
Sbjct: 188 ALTDVLTGLNAAVGILGALMRARETGRGEEISVSLINSTLSALVNLAQQSLVTDREPARV 247
Query: 440 GTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
G +H +VP+QVF T++ + + G+D Y+ +C ++ LA DPRY T
Sbjct: 248 GNAHTTIVPYQVFPTADAEIVVAAGNDALYRRLCAAIDRPDLAEDPRYGT 297
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 10/144 (6%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ LA DPRY T RV +R+ L E+ + + W+ P +V
Sbjct: 280 LCAAIDRPDLAEDPRYGTNPDRVAHRDALIDELSKVLRSRPADHWMTALVDAGVPVGRVR 339
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ +++ + H G ++ V + T P PP LG+H++ +L
Sbjct: 340 GVLDALRTADTSGDDVLRTVDHPTAGPLEQVRAGFRMAGT-PVPMAAPPLLGQHSEEILT 398
Query: 121 DLLNYDETTIAKLKEKKILGLIER 144
+L L ++I L+ER
Sbjct: 399 EL---------GLTPERIAALVER 413
>gi|420239708|ref|ZP_14744002.1| putative acyl-CoA transferase/carnitine dehydratase [Rhizobium sp.
CF080]
gi|398078989|gb|EJL69867.1| putative acyl-CoA transferase/carnitine dehydratase [Rhizobium sp.
CF080]
Length = 400
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 128/298 (42%), Positives = 186/298 (62%), Gaps = 15/298 (5%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE----LS 271
PL+ +R+++L R++AGP+ +LAD+GA+VIKVE P GD+ R WGPPF+ + +
Sbjct: 9 PLTGIRVIELARVLAGPWAGQMLADMGADVIKVENPDGGDDTRAWGPPFVEGKDGENLSA 68
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NR K+S+ VD KT EGQ+I++ LA DVL+ENF G L + L Y+ L +IN
Sbjct: 69 AYYHSTNRGKRSIAVDLKTEEGQEIVRRLAATADVLIENFKLGGLVKYGLDYESLKKINP 128
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+LIYCS+TGFG GPY + GYD I + G + ITG PDG P K G+A D+ TG+YA
Sbjct: 129 KLIYCSITGFGQNGPYANLAGYDYIVQGMSGFMSITGEPDGQPMKAGVAIADIFTGIYAV 188
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A+ AL+H KTG+GQ +D LL Q +L N NYL +G R G +H N+ P++V
Sbjct: 189 TAIQGALIHAMKTGEGQHVDMALLDVQAGILANQNMNYLVSGEAPVRLGNAHPNISPYEV 248
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTG-----------ALILAMTS 498
T +G++ + G+D Q++ +C+++ ++ +A D R+ T LILA TS
Sbjct: 249 VPTEDGHLILAVGNDGQFRRLCRILGIEQVADDERFATNKARVANRVEVRRLILAQTS 306
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 60/122 (49%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+++ ++ +A D R+ T RV NR + + I A+T + E L + P +N
Sbjct: 269 LCRILGIEQVADDERFATNKARVANRVEVRRLILAQTSKWKKAELLSACGDNAVPAGPIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI+++F D +++ L ++ I V + S T P PALGEHT VL
Sbjct: 329 SIAEMFDDPQVKERGLRIDLEAADGTVIPGVRSPIVLSETPLAYHRPSPALGEHTADVLA 388
Query: 121 DL 122
+L
Sbjct: 389 EL 390
>gi|307728029|ref|YP_003911242.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
sp. CCGE1003]
gi|307588554|gb|ADN61951.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
sp. CCGE1003]
Length = 438
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 132/287 (45%), Positives = 180/287 (62%), Gaps = 9/287 (3%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE---- 269
S PLS++R+LDL+RI+AGP+ +LADLGA+VIKVE+P GD+ R WGPPFL ++
Sbjct: 45 SGPLSHIRVLDLSRIMAGPWSGQILADLGADVIKVERPEVGDDTRSWGPPFLKASDGTPS 104
Query: 270 -LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSE 328
S YF VNR K+SV VD TPEGQ+ ++ LA QCDV++ENF G L R L Y L
Sbjct: 105 KESGYFLSVNRGKRSVAVDLATPEGQETVRALAAQCDVVLENFKVGALKRYGLAYDDLKA 164
Query: 329 INSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITG----HPDGPPCKVGIASIDL 384
+ LIYCS+TGFG GP + YD + ++GGL+ +TG P G P KVG+ +D+
Sbjct: 165 VKPDLIYCSITGFGQDGPKAENAAYDFMIQAMGGLMSVTGERDDEPGGGPQKVGVPIVDI 224
Query: 385 ATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHA 444
TG+YA ++AAL + +TG+G+ ID +L QV+ L N NYL +G R G H
Sbjct: 225 MTGMYATVGILAALARRNETGEGEYIDVAMLDVQVAFLANQAMNYLVSGKTPVRNGNKHP 284
Query: 445 NVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
N+ P VFK +GY+ + G+D Q++ C V+ LA D R+ T A
Sbjct: 285 NIQPQDVFKCRDGYLVLAVGNDGQFRKFCDVIARSELADDERFATNA 331
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 53/122 (43%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C V+ LA D R+ T A RV N L I +E WL + P +N
Sbjct: 312 FCDVIARSELADDERFATNAQRVRNLPALLTMIREALLEDDLAVWLAKLDAATVPCGPIN 371
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ VF D ++ ++++ + H G + V + PP LG+HTD VL+
Sbjct: 372 TVPMVFEDAQVKHREMLRHLPHPVSGTVPQVVSPIRLRNAPLSFDRAPPTLGQHTDQVLR 431
Query: 121 DL 122
+L
Sbjct: 432 EL 433
>gi|389872302|ref|YP_006379721.1| acyl-CoA transferase/carnitine dehydratase [Advenella kashmirensis
WT001]
gi|388537551|gb|AFK62739.1| acyl-CoA transferase/carnitine dehydratase [Advenella kashmirensis
WT001]
Length = 386
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 127/280 (45%), Positives = 181/280 (64%), Gaps = 7/280 (2%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL---NNTELSTY 273
L +R++DL+RI+AGP+CT LADLGAEVIKVE+PV GD+ R+WGPP+L + +S Y
Sbjct: 6 LKGIRVVDLSRILAGPWCTQNLADLGAEVIKVERPVAGDDTRQWGPPYLETESGESMSAY 65
Query: 274 FTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQL 333
F C NRNKKS+C+DFK ++ + +L + DVLVEN+ G L + L Y+ + IN +L
Sbjct: 66 FMCCNRNKKSICLDFKHAPDRERLLELIRGADVLVENYRVGTLKQYGLDYESVRHINPRL 125
Query: 334 IYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATGLY 389
+Y S+TG+G GP RPGYD I +GGL+ TGH DG P + G+A +D+ TG+Y
Sbjct: 126 VYASITGYGQTGPKSARPGYDYIFQGLGGLMSYTGHADGEPGAGPLRTGVAVVDITTGMY 185
Query: 390 AHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPH 449
A A++AAL ++ TG+G +D L V+M N ANYL +G R G +H N+ P+
Sbjct: 186 ATSAILAALFQRHGTGQGTWLDLALFDVAVAMNANQAANYLISGENPARSGNAHPNLAPY 245
Query: 450 QVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+VF+ S+GY+ + G+D Q+ C + LA DPR+ T
Sbjct: 246 EVFRASDGYLILAIGNDTQFARFCAFCDRSELADDPRFST 285
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 3/120 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C + LA DPR+ T + R+ N L + + + W + + VN
Sbjct: 268 FCAFCDRSELADDPRFSTNSERIRNLPSLRAVLADILITEPRNHWTAALDNLGISWGAVN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIV-GPAVAYSLTQPEVRTPPPALGEHTDYVL 119
++ VFADE ++ ++++ + H G I ++ P +A T V PPP LGEHT VL
Sbjct: 328 TLEDVFADEQVRHRQMLQTVVHPTLGQIPLIRNPMLAPGSTPCPV--PPPLLGEHTKAVL 385
>gi|429210556|ref|ZP_19201723.1| putative acyl-CoA transferase [Pseudomonas sp. M1]
gi|428159330|gb|EKX05876.1| putative acyl-CoA transferase [Pseudomonas sp. M1]
Length = 407
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 128/282 (45%), Positives = 185/282 (65%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE-----LS 271
LS++R+LDL+R++AGP+ +LADLGAEVIK+E+P +GD+ R WGPPFL + E +
Sbjct: 5 LSHIRVLDLSRVLAGPWAGQILADLGAEVIKIERPGSGDDTRAWGPPFLKDAEGRDTSEA 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNKKS+ +DF PEGQ+++++LA + D+++ENF G L L Y+ L ++N
Sbjct: 65 AYYLSANRNKKSLTIDFTRPEGQRLVRELAAKADIVLENFKVGGLKSYGLDYESLKQLNP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY R GYD + +GGL+ ITG D P KVG+A D+ TG
Sbjct: 125 KLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSITGRSDAEEGAGPVKVGVALTDILTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ +G GQ ID LL QV+ L N NYL GI +R G +H N+V
Sbjct: 185 LYSSTAILAALAHRDVSGIGQHIDMALLDVQVACLANQTLNYLTTGIPPRRLGNAHPNIV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F T++G + + G+D Q++ C++ A D R+ +
Sbjct: 245 PYQDFPTADGDMILTVGNDGQFRKFCELAGHPEWADDERFAS 286
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C++ A D R+ + RV +R++L I T+ +TT +W+ + P +N
Sbjct: 269 FCELAGHPEWADDERFASNKARVAHRDVLIPLIRQATVMRTTAQWIAALEQAGVPCGPIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++QVFAD + L ++ H G + V + S T E R PP LG+HT+ +L+
Sbjct: 329 DLAQVFADPQVIARGLRVDLPHPLAGTVPQVASPIRLSQTPVEYRNAPPTLGQHTEQILE 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L D I KL+E+ ++
Sbjct: 389 SVLGLDAAAIGKLREQGVI 407
>gi|347735173|ref|ZP_08868103.1| CAIB/BAIF family protein [Azospirillum amazonense Y2]
gi|346921679|gb|EGY02305.1| CAIB/BAIF family protein [Azospirillum amazonense Y2]
Length = 421
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 126/279 (45%), Positives = 177/279 (63%), Gaps = 5/279 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTEL 270
PL+ +++LD++R++AGP T +L DLGA+V+KVE+P GD+ R WGPPFL +T
Sbjct: 11 PLTGLKVLDMSRVLAGPSATQILGDLGADVVKVERPGQGDDTRAWGPPFLKDDAGQDTRE 70
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
S Y+ NRNK+S+ +DF P G+ + L DV+VEN+ G LDR LGY+ L +
Sbjct: 71 SAYYLSANRNKRSLTLDFTNPAGKALALQLIGHADVVVENYKTGTLDRYGLGYEDLRDAF 130
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYA 390
+LIYCS+TGFG GPY R GYD + +GG + +TG P+G P K G+A DL TG YA
Sbjct: 131 PRLIYCSITGFGHTGPYAARAGYDYLVQGMGGFMSLTGEPEGQPLKAGVAIADLMTGTYA 190
Query: 391 HGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQ 450
A++AAL H+ TG+GQ ID +L TQV+ L + G YL +G R G +H +VP+Q
Sbjct: 191 VIAILAALRHRDHTGRGQAIDLSLFDTQVAWLSHPGQYYLTSGHLAPRVGNAHPTIVPYQ 250
Query: 451 VFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
F TS+G++ + G+D+Q+ C + A DPRY T
Sbjct: 251 TFATSDGWIILAVGNDEQFARFCHLTGNAAWASDPRYAT 289
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 11/150 (7%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C + A DPRY T RV NR+ L I A ++++ W+ + + P +N
Sbjct: 272 FCHLTGNAAWASDPRYATNQARVGNRDSLVPAIAAVIQGQSSQFWIDALEPLGVPCGPIN 331
Query: 61 SISQVFADEHIQDIKLVKEISHEKY-----------GDIKIVGPAVAYSLTQPEVRTPPP 109
SI +VFAD + + + H + G ++++G + +S T R PP
Sbjct: 332 SIDKVFADPQVAARGMRVTLPHPQAGGTGAPGAGLPGTVELIGSPMKFSDTPVNYRQAPP 391
Query: 110 ALGEHTDYVLKDLLNYDETTIAKLKEKKIL 139
LG+HTD VL+D L DE I +L+ L
Sbjct: 392 TLGQHTDAVLQDWLRLDEEEIRQLRHTGAL 421
>gi|412337900|ref|YP_006966655.1| hypothetical protein BN112_0572 [Bordetella bronchiseptica 253]
gi|408767734|emb|CCJ52490.1| conserved hypothetical protein [Bordetella bronchiseptica 253]
Length = 415
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 127/286 (44%), Positives = 185/286 (64%), Gaps = 8/286 (2%)
Query: 215 LPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE----L 270
+P+ +R+LDL+R++AGP+CT +LAD GA+VIK+E+P GD+ R WGPPF + + +
Sbjct: 17 MPMDGIRVLDLSRVLAGPWCTQMLADFGADVIKIERPGQGDDSRAWGPPFYESADGHERV 76
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
S YF NR K+SVC+D ++ +Q +++LA + DVLVENF G L R L Y LS +N
Sbjct: 77 SAYFCAANRGKRSVCLDLESEADRQALRELALRSDVLVENFKAGSLARHGLDYATLSALN 136
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLAT 386
+L+YCS+TG+G GPY RPGYD I ++GG++ +TG PD G P K GI IDL T
Sbjct: 137 PRLVYCSITGYGQTGPYAARPGYDSIIQAVGGMMSVTGLPDDAAGGGPQKTGIPIIDLMT 196
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANV 446
G+YA V+ AL + +G+GQ +D +L+ QVS L + AN+L G +R G H V
Sbjct: 197 GVYACCGVLMALREREASGQGQHLDLSLMDVQVSALSTLAANFLACGQAPQRNGNEHPTV 256
Query: 447 VPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
VP + +G + + G+D+Q+Q +C+ ++ + LA DPRY T L
Sbjct: 257 VPGDAVQCLDGPLMLMVGNDRQFQRLCRHLDRESLARDPRYATNEL 302
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 61/122 (50%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ ++ + LA DPRY T LRV+ + L ++ +T + WL P +
Sbjct: 282 LCRHLDRESLARDPRYATNELRVQGKNALMAQLREAFRGQTRQYWLERLLAEDIPCGPIQ 341
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++++V AD H++ LV +G+I+ +G A+ S T P LGEHT+ VL
Sbjct: 342 TVAEVLADPHVRHRALVAAAPDPVFGEIRAMGSALRMSRTPARHGRAPTVLGEHTEAVLS 401
Query: 121 DL 122
L
Sbjct: 402 SL 403
>gi|229089120|ref|ZP_04220421.1| L-carnitine dehydratase/bile acid-inducible protein F [Bacillus
cereus Rock3-44]
gi|228694196|gb|EEL47871.1| L-carnitine dehydratase/bile acid-inducible protein F [Bacillus
cereus Rock3-44]
Length = 395
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 125/285 (43%), Positives = 186/285 (65%), Gaps = 2/285 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L ++I+DL+R++AGPFCTM+L DLGAEVIK+E GD+ R+WGPPFL S YF C
Sbjct: 5 LQGIKIIDLSRVLAGPFCTMILGDLGAEVIKIENTGNGDDTREWGPPFLEGE--SAYFLC 62
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
NRNK+S+ ++ K+ G++++K L DV+V+NF PG L+R+ LGY+ L E+ +I
Sbjct: 63 ANRNKESMTLNLKSEVGKEVLKKLVSHADVVVQNFKPGTLERMGLGYEILQEVKEDIILA 122
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S++GFG KGP PGYD + ++ GL+ ITG + P KVG+A D+ TGL+ ++A
Sbjct: 123 SISGFGQKGPGSRLPGYDYMIQAMSGLMSITGGREEEPTKVGVAISDVLTGLFTCIGILA 182
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
AL H+ +TG+GQ+ID +L +Q++ L+NV +NYL G +R G H N+VP+QVF +
Sbjct: 183 ALQHRNRTGEGQEIDISLFDSQLAALVNVASNYLCTGELPERLGNQHPNIVPYQVFHVED 242
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
G + + G+D+Q+ C ++ Q L+ RY T A L L+
Sbjct: 243 GDLVVAVGNDEQFHKFCLLLGRQELSSLERYKTNAARLQYKDELV 287
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 66/137 (48%), Gaps = 1/137 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C ++ Q L+ RY T A R++ ++ L I + +K EEW + P +
Sbjct: 258 FCLLLGRQELSSLERYKTNAARLQYKDELVNIIAKEMKKKKKEEWKQLLDEAGIPNGPIL 317
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ + E + + H ++K+VG + S T +++ PP GEHT+ +LK
Sbjct: 318 NVKEALETEQAVARDMTIHMEHPTIENLKLVGSPLKLSKTPVQMQKHPPLHGEHTEKILK 377
Query: 121 DLLNYDETTIAKLKEKK 137
+ + Y + +I ++ +K+
Sbjct: 378 N-IGYSQESIMEMTKKQ 393
>gi|33601745|ref|NP_889305.1| hypothetical protein BB2769 [Bordetella bronchiseptica RB50]
gi|427814627|ref|ZP_18981691.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
gi|33576182|emb|CAE33261.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
gi|410565627|emb|CCN23185.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
Length = 415
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 127/286 (44%), Positives = 185/286 (64%), Gaps = 8/286 (2%)
Query: 215 LPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE----L 270
+P+ +R+LDL+R++AGP+CT +LAD GA+VIK+E+P GD+ R WGPPF + + +
Sbjct: 17 MPMDGIRVLDLSRVLAGPWCTQMLADFGADVIKIERPGQGDDSRAWGPPFYESADGHERV 76
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
S YF NR K+SVC+D ++ +Q +++LA + DVLVENF G L R L Y LS +N
Sbjct: 77 SAYFCAANRGKRSVCLDLESEADRQALRELALRSDVLVENFKAGSLARHGLDYATLSALN 136
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLAT 386
+L+YCS+TG+G GPY RPGYD I ++GG++ +TG PD G P K GI IDL T
Sbjct: 137 PRLVYCSITGYGQTGPYAARPGYDSIIQAVGGMMSVTGLPDDAAGGGPQKTGIPIIDLMT 196
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANV 446
G+YA V+ AL + +G+GQ +D +L+ QVS L + AN+L G +R G H V
Sbjct: 197 GVYACCGVLMALREREASGQGQHLDLSLMDVQVSALSTLAANFLACGQAPQRNGNEHPTV 256
Query: 447 VPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
VP + +G + + G+D+Q+Q +C+ ++ + LA DPRY T L
Sbjct: 257 VPGDAVQCLDGPLMLMVGNDRQFQRLCRHLDRESLARDPRYATNEL 302
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 61/122 (50%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ ++ + LA DPRY T LRV+ + L ++ +T + WL P +
Sbjct: 282 LCRHLDRESLARDPRYATNELRVQGKNALMAQLREAFRGQTRQYWLERLLAEGIPCGPIQ 341
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++++V AD H++ LV +G+I+ +G A+ S T P LGEHT+ VL
Sbjct: 342 TVAEVLADPHVRHRALVAAAPDPVFGEIRAMGSALRMSRTPARHGRAPTVLGEHTEAVLS 401
Query: 121 DL 122
L
Sbjct: 402 SL 403
>gi|347821406|ref|ZP_08874840.1| acyl-CoA transferase/carnitine dehydratase [Verminephrobacter
aporrectodeae subsp. tuberculatae At4]
Length = 392
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 128/281 (45%), Positives = 182/281 (64%), Gaps = 8/281 (2%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE----LST 272
L+ +++LDL+RI+AGP+CT LADLGA+VIKVE P GD+ R+WGP E LS+
Sbjct: 6 LAGIKVLDLSRILAGPWCTQNLADLGAQVIKVEHPGRGDDTRQWGPLHTKEEEGGERLSS 65
Query: 273 YFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQ 332
YF+C NR K+SV +DF G Q I+ L + DV VENF G L R L Y+ + IN +
Sbjct: 66 YFSCCNRGKRSVAIDFAGEAGAQAIRTLVQDADVFVENFKVGTLARYGLDYESVRRINPR 125
Query: 333 LIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATGL 388
LIY ++TGFG GP D+PGYD + +GGL+ TG PDG P + G+A +DL TG+
Sbjct: 126 LIYLAITGFGQTGPMADKPGYDYVFQGMGGLMSYTGQPDGAPGSGPLRTGVAVVDLTTGM 185
Query: 389 YAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVP 448
YA AV+AALL + +TG+GQ +D LL V++ N GA+YL +G+ +R G +H + P
Sbjct: 186 YATSAVLAALLQRERTGQGQYLDIALLDVAVALNANQGASYLLSGVNPQRSGNAHPHCAP 245
Query: 449 HQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
++VF+ ++G+V + G+D Q+Q C+V LA D R+ +
Sbjct: 246 YEVFQCADGHVILAIGNDTQFQRFCQVAGAPELATDERFAS 286
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 10/117 (8%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVEN----RELLCKEIEAKTMEKTTEEWLLIFQGVSFPY 56
C+V LA D R+ + + R+ + RELL + + W F P+
Sbjct: 269 FCQVAGAPELATDERFASNSNRIAHLPALRELLANLFKTRVRRS----WTDAFDEAGVPW 324
Query: 57 AQVNSISQVFADEHIQDIKLVKEISHEKYGDIKIV-GPAVAYSLTQPEVR-TPPPAL 111
+NS+ +VF D +Q ++V+ ++H G I+ V P ++ T+ R PP+L
Sbjct: 325 GPINSLEEVFNDPQVQHRQMVQALNHPGLGQIRTVRNPMLSSPHTRSSARVAAPPSL 381
>gi|418531632|ref|ZP_13097543.1| L-carnitine dehydratase/bile acid-inducible [Comamonas testosteroni
ATCC 11996]
gi|371451134|gb|EHN64175.1| L-carnitine dehydratase/bile acid-inducible [Comamonas testosteroni
ATCC 11996]
Length = 416
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 128/286 (44%), Positives = 186/286 (65%), Gaps = 9/286 (3%)
Query: 213 PSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NN 267
P+ L+ +++LDL+R++AGP+ T +LADLGA+V+KVE+PV GD+ R WGPPFL N+
Sbjct: 8 PTGALTGIKVLDLSRVLAGPWATQMLADLGADVVKVERPVAGDDTRHWGPPFLRDDAGND 67
Query: 268 TELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLS 327
T ++YFT NRNK+S+ VD PEG+ ++ +A++ DV+VENF G L + L Y L
Sbjct: 68 TREASYFTACNRNKRSITVDMAHPEGRALLLRMAQEADVVVENFKTGGLKQYGLDYASLK 127
Query: 328 EINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASID 383
+N +L+YCS+TGFG GPY +R GYD++ ++ GL+ ITGH P G P KVG+A ID
Sbjct: 128 ALNPRLVYCSITGFGQDGPYAERAGYDLMVQAMCGLMSITGHADGEPGGGPLKVGVAVID 187
Query: 384 LATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSH 443
+ TGLYA A++AAL ++ TG+GQ ID LL +++L N A +L G R G +H
Sbjct: 188 VFTGLYASNAILAALNARHTTGQGQYIDMALLDVGMAVLANQAAGFLTTGQAPGRAGNTH 247
Query: 444 ANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
++ P+Q F T +G V + G+D Q+ C + A D R+ T
Sbjct: 248 PSLAPYQDFPTLDGNVLLAIGNDGQFARFCAAIEYAEWAQDERFAT 293
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 70/142 (49%), Gaps = 4/142 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C + A D R+ T RV+NR L ++ + ++T +W+ + + + P +N
Sbjct: 276 FCAAIEYAEWAQDERFATNTARVQNRSALLALMKPVMLTRSTTDWIALLEDKAVPCGPIN 335
Query: 61 SISQVFADEHIQDIKLVKEI---SHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDY 117
+I+Q F D ++ + + + + + G I V + S T R PPALG+HTD
Sbjct: 336 TIAQAFEDPQVKARGIQQSLPRNAGDGIGHIATVSNPMRLSATPVTYRRAPPALGQHTDE 395
Query: 118 VLKDLLNYDETTIAKLKEKKIL 139
VL++ D+ IA L E+ ++
Sbjct: 396 VLRE-FGLDDNAIAALHEQGVV 416
>gi|212639076|ref|YP_002315596.1| acyl-CoA transferase [Anoxybacillus flavithermus WK1]
gi|212560556|gb|ACJ33611.1| Predicted acyl-CoA transferase [Anoxybacillus flavithermus WK1]
Length = 428
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 126/275 (45%), Positives = 180/275 (65%), Gaps = 2/275 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L+ +R++DLTR++AGP+ TM+L DLGA+V+K+E P D+ R WGPPF N +S Y+
Sbjct: 49 LNGIRVVDLTRVLAGPYATMILGDLGADVMKIEAPGGSDDTRFWGPPFQNG--MSAYYAA 106
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
VNRNK+S+ V+ K G++ I+ L K DV++ NF G ++RL LGY LS IN +LIYC
Sbjct: 107 VNRNKRSMTVNLKEESGKETIRQLVKTADVIIHNFKTGTMERLGLGYDDLSAINPKLIYC 166
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S+TGFG GPY+ GYD I ++ G + I G P KVG+A D+ TGLYA AV A
Sbjct: 167 SITGFGETGPYRHLAGYDYIIQAMSGWMSINGTEQSGPLKVGVAVTDIFTGLYAAIAVQA 226
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
AL+ + KTG GQKID +L +S L+NV +NYL +G K G H N+VP+ ++ S+
Sbjct: 227 ALIAREKTGSGQKIDLSLFDCAISALVNVASNYLISGEVPKPLGNDHPNIVPYSTYEASD 286
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
G + G+D+Q+Q +C+++ Q + D R+ T A
Sbjct: 287 GLFVVAVGNDRQFQALCELLEDQTIGADERFQTNA 321
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+++ Q + D R+ T A RV R L + + + +K+ EW +F+ P V+
Sbjct: 302 LCELLEDQTIGADERFQTNAGRVTYRHELNQRLNDELKKKSRAEWQRLFEQKGIPCGPVH 361
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ QVF ++ + H G++K+VG + +S T R PP GEH +Y+ +
Sbjct: 362 TLDQVFQHPQTLARNMIIRMDHPDVGELKLVGTPLKFSHTPVTYRLAPPLAGEH-NYLFE 420
Query: 121 DLLNYDE 127
+DE
Sbjct: 421 GGNKHDE 427
>gi|16264596|ref|NP_437388.1| hypothetical protein SM_b21182 [Sinorhizobium meliloti 1021]
gi|384533280|ref|YP_005715944.1| formyl-CoA transferase [Sinorhizobium meliloti BL225C]
gi|384538996|ref|YP_005723080.1| carnitine dehydratase [Sinorhizobium meliloti SM11]
gi|15140734|emb|CAC49248.1| carnitine dehydratase [Sinorhizobium meliloti 1021]
gi|333815456|gb|AEG08123.1| Formyl-CoA transferase [Sinorhizobium meliloti BL225C]
gi|336037649|gb|AEH83579.1| carnitine dehydratase [Sinorhizobium meliloti SM11]
Length = 394
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 131/280 (46%), Positives = 180/280 (64%), Gaps = 5/280 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL----S 271
PL +R+L+L RI+AGP+ LADLGA+VIKVE P GD+ R WGPPF+ + +
Sbjct: 4 PLKGIRVLELARILAGPWIGQTLADLGADVIKVESPA-GDDTRTWGPPFVTGEDDERLDA 62
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NR K+SV +DF T EGQ+ ++ LA Q DVL+ENF G L + L Y+ LS++N
Sbjct: 63 AYFHACNRGKRSVVLDFTTAEGQEAVRRLAAQSDVLLENFKVGGLAKYGLDYESLSKVNP 122
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+LIYCSVTGFG GPY R GYD I + G++ +TG PD P K+G+A D+ TGLY
Sbjct: 123 RLIYCSVTGFGQDGPYAHRAGYDYIVQGMSGIMDLTGEPDREPQKIGVAFADIFTGLYGV 182
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
AV AAL + +TG+GQ+ID LL +L N N+L +G +R G +H N+ P+QV
Sbjct: 183 IAVQAALAQRERTGEGQQIDMALLDCMTGVLANQALNFLVSGKAPRRLGNAHPNIAPYQV 242
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
F TS+G++ + G+D+Q+ C+++ LA D RY T A
Sbjct: 243 FPTSDGHLIVAVGNDRQFVKFCELLGRPDLAADARYRTNA 282
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 60/135 (44%), Gaps = 24/135 (17%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+++ LA D RY T A RV++R+ L E+ A+T + + L + P +N
Sbjct: 263 FCELLGRPDLAADARYRTNADRVQHRDSLTPELAAETAKYERDTLLEKLEASGVPGGPIN 322
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTP------------- 107
+++ VFAD I ++ + H A + T P VRTP
Sbjct: 323 TVADVFADPQIVHRQMRVDTPHTG-----------AAAGTSPGVRTPIRFSGATLALDRG 371
Query: 108 PPALGEHTDYVLKDL 122
P LGEHT VL ++
Sbjct: 372 VPRLGEHTAEVLAEI 386
>gi|351728924|ref|ZP_08946615.1| formyl-CoA transferase [Acidovorax radicis N35]
Length = 424
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 136/307 (44%), Positives = 193/307 (62%), Gaps = 15/307 (4%)
Query: 210 SENPSLP--LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-- 265
+ +PS P L +++LDL+R++AGP+CT +LADLGA+V+KVE+P GD+ R WGPPFL
Sbjct: 2 TTSPSSPGALVGIKVLDLSRVLAGPWCTQILADLGADVVKVERPGAGDDTRHWGPPFLKD 61
Query: 266 ---NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLG 322
N+T ++YFT NRNK+SV +D T EGQQ+I+ +A+Q D+LVENF G L + L
Sbjct: 62 AEGNDTTQASYFTACNRNKRSVTIDMATAEGQQLIRQMAQQADILVENFKVGGLQQYGLD 121
Query: 323 YKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVG 378
++ L +N +LIYCSVTGFG GPY +R GYD++ ++ G++ ITG P G P +VG
Sbjct: 122 HESLRALNPRLIYCSVTGFGQDGPYAERAGYDLMIQAMTGMMSITGRADGEPGGGPLRVG 181
Query: 379 IASIDLATGLYAHGAVMAALLHK----YKTGKGQKIDCNLLSTQVSMLINVGANYLNAGI 434
+A DL TG+YA A++AAL + TG GQ ID +LL +++L N A +L G
Sbjct: 182 VALTDLFTGVYASTAIVAALNVRDNATSGTGLGQHIDMSLLDVGMAILANQAAGFLATGT 241
Query: 435 EGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALIL 494
R G SH ++ P+Q F T +G + + G+D Q+Q C A D RY T L +
Sbjct: 242 APTRQGNSHPSLAPYQDFPTQDGAMLLAIGNDGQFQRFCAAAGQPQWATDARYATNTLRV 301
Query: 495 AMTSHLI 501
+ LI
Sbjct: 302 KHRTDLI 308
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 70/147 (47%), Gaps = 9/147 (6%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C A D RY T LRV++R L +EA T +TT +W+ + + + P +N
Sbjct: 279 FCAAAGQPQWATDARYATNTLRVKHRTDLIPAMEAVTRTRTTADWITLLEDKAVPCGPIN 338
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDI------KIVGPAVAYSLTQ--PEVRTPPPALG 112
+I+Q F D ++ L + GD +I G A L+ P +R PPALG
Sbjct: 339 TIAQAFDDAQVKARGLAVALPRWAEGDTAQDGVQQITGVASPLRLSANPPVLRNAPPALG 398
Query: 113 EHTDYVLKDLLNYDETTIAKLKEKKIL 139
+HTD VL + L D IA L+ +L
Sbjct: 399 QHTDEVLGE-LGLDAARIAALRANGVL 424
>gi|307945456|ref|ZP_07660792.1| L-carnitine dehydratase/bile acid-inducible protein F [Roseibium
sp. TrichSKD4]
gi|307771329|gb|EFO30554.1| L-carnitine dehydratase/bile acid-inducible protein F [Roseibium
sp. TrichSKD4]
Length = 339
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 125/280 (44%), Positives = 182/280 (65%), Gaps = 5/280 (1%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL--- 270
+ PL V++++L RI+AGP+ LADLGA+V+KVE P +GD+ R WGPPF+ + E
Sbjct: 2 TAPLEGVKVVELARILAGPWIGQTLADLGADVVKVESP-SGDDTRGWGPPFVEDEEGEPL 60
Query: 271 -STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEI 329
+ YF NR K+S+ VDF+T EGQ+ ++ L + D+L+ENF G L++ L Y+ L +
Sbjct: 61 DAAYFHSCNRGKRSIAVDFRTSEGQETVRKLVARSDILIENFKVGGLEKYGLDYESLKAV 120
Query: 330 NSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLY 389
N +LIYCSVTGFG GPY R GYD + +GG++ +TG P G P K+G+A D+ TGLY
Sbjct: 121 NPKLIYCSVTGFGQSGPYAHRAGYDFMIQGMGGIMDLTGDPQGEPQKIGVAFADIFTGLY 180
Query: 390 AHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPH 449
V++AL + +TG G+ +D LL QV +L N N++ +G KR G +H N+VP+
Sbjct: 181 GVIGVLSALHRRDRTGHGEHVDMALLDAQVGVLANQAQNFIVSGKSPKRLGNAHPNIVPY 240
Query: 450 QVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
QVF S+G++ I G+D Q+ +C V+ LA DPR+ T
Sbjct: 241 QVFSVSDGHLIIAVGNDGQFAKLCDVLGAAELANDPRFAT 280
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C V+ LA DPR+ T RV NRELL I ++ L+ +G P +N
Sbjct: 263 LCDVLGAAELANDPRFATNKARVGNRELLIGLIAPLIAAFKRDDLLVQLEGKGVPAGPIN 322
Query: 61 SISQVFADEHI 71
S+ VF D +
Sbjct: 323 SVEDVFNDPQV 333
>gi|407940377|ref|YP_006856018.1| formyl-CoA transferase [Acidovorax sp. KKS102]
gi|407898171|gb|AFU47380.1| formyl-CoA transferase [Acidovorax sp. KKS102]
Length = 424
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 134/309 (43%), Positives = 196/309 (63%), Gaps = 14/309 (4%)
Query: 206 LALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL 265
+ SS P L+ +++LDL+R++AGP+CT +LADLGA+V+KVE+P GD+ R+WGPPFL
Sbjct: 1 MTTSSTAPGA-LAGIKVLDLSRVLAGPWCTQVLADLGADVVKVERPGVGDDTRQWGPPFL 59
Query: 266 -----NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLN 320
N+T ++Y+T NRNK+SV +D +PEGQ +I+ +A + D++VENF G L +
Sbjct: 60 KDADGNDTNQASYYTACNRNKRSVTIDMASPEGQALIRQMALEADIVVENFKVGGLKQYG 119
Query: 321 LGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITG----HPDGPPCK 376
L ++ L +N +LIYCSVTGFG GPY +R GYD++ ++ GL+ ITG P G P +
Sbjct: 120 LDHESLRALNPRLIYCSVTGFGQDGPYAERAGYDLMVQAMTGLMSITGQADNQPGGGPMR 179
Query: 377 VGIASIDLATGLYAHGAVMAALLHK----YKTGKGQKIDCNLLSTQVSMLINVGANYLNA 432
VG+A IDL TGLYA A++AAL + TG+GQ ID LL +++L N + +L
Sbjct: 180 VGVAVIDLFTGLYASNAILAALHVRDNAVNGTGQGQHIDMALLDVGMAVLANQASGFLAT 239
Query: 433 GIEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
G R G SH ++ P+Q F T++G + + G+D Q+Q C A DPR+ T L
Sbjct: 240 GKAPGRMGNSHPSLAPYQDFPTADGNMLLAIGNDGQFQRFCAAAEQPQWASDPRFATNTL 299
Query: 493 ILAMTSHLI 501
+ + LI
Sbjct: 300 RVQNRAALI 308
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 72/147 (48%), Gaps = 9/147 (6%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C A DPR+ T LRV+NR L +EA T +TT +W+ + + + P +N
Sbjct: 279 FCAAAEQPQWASDPRFATNTLRVQNRAALIPAMEAVTRTRTTADWITLLENKAVPCGPIN 338
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGD--------IKIVGPAVAYSLTQPEVRTPPPALG 112
+I+Q F D +Q L + K G+ I V + S T P +R PPALG
Sbjct: 339 TIAQAFDDAQVQARGLAVTLPRWKDGEAATDNVQQITGVASPLRLSATPPVLRNAPPALG 398
Query: 113 EHTDYVLKDLLNYDETTIAKLKEKKIL 139
+HTD VL++ + D IA L+ ++
Sbjct: 399 QHTDEVLRE-MGLDAERIAALRASGVV 424
>gi|417859452|ref|ZP_12504508.1| L-carnitine dehydratase [Agrobacterium tumefaciens F2]
gi|338822516|gb|EGP56484.1| L-carnitine dehydratase [Agrobacterium tumefaciens F2]
Length = 400
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 120/278 (43%), Positives = 181/278 (65%), Gaps = 4/278 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE----LS 271
PLS +R+++L R++AGP+ +LAD+GA+VIKVE P GD+ R WGPPF+ +T+ +
Sbjct: 10 PLSGIRVIELARVLAGPWAGQMLADMGADVIKVENPEGGDDTRTWGPPFVESTDGENLSA 69
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NR K+S+ D KTPEG ++++ L + DV++ENF G L + L Y+ L +N
Sbjct: 70 AYYHATNRGKRSIVADLKTPEGCELVRRLVRTADVVIENFKRGGLAKYGLDYESLRALNP 129
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+LIYCS+TGFG GPY D GYD I + G + ITG PDG P K G+A D+ TG+Y+
Sbjct: 130 KLIYCSITGFGQTGPYADFAGYDYIVQGMSGFMSITGEPDGQPMKAGVAVADIFTGIYSV 189
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A+ AAL+H +TG+GQ ID LL Q ++L N NYL +G R G +H N+ P++V
Sbjct: 190 SAIQAALIHAIRTGEGQHIDMALLDVQSAVLANQNMNYLISGKAPVRLGNAHPNISPYEV 249
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
T++G++ + G+D Q++ +C ++ + +A D R+ T
Sbjct: 250 VPTADGFLILAVGNDGQFRRLCNILGIGAIADDERFAT 287
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 62/129 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ + +A D R+ T RV +++ + + + +T++ + L + + P +N
Sbjct: 270 LCNILGIGAIADDERFATNKARVAHKQDVRQIVSTETLKWQKRDLLTACEKNAVPAGPIN 329
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI ++FAD ++ L ++ + I V + S T P P LGEH VL
Sbjct: 330 SIEEMFADPQVKARGLRVDLEAQDGTVIPGVRTPIIMSQTPLHYERPSPKLGEHQAQVLA 389
Query: 121 DLLNYDETT 129
+L N + TT
Sbjct: 390 ELENIERTT 398
>gi|422319887|ref|ZP_16400960.1| hypothetical protein HMPREF0005_01588 [Achromobacter xylosoxidans
C54]
gi|317405395|gb|EFV85710.1| hypothetical protein HMPREF0005_01588 [Achromobacter xylosoxidans
C54]
Length = 398
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 127/278 (45%), Positives = 182/278 (65%), Gaps = 5/278 (1%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L VRILDL+RI+AGP T LL DLGA+V+KVE+P GD+ RKWGPP++ +T+ S
Sbjct: 9 LDGVRILDLSRILAGPSATQLLGDLGADVVKVEKPGEGDDTRKWGPPYVVGKDGRDTDES 68
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+S+ +D T +G+ ++ L + DVLVEN+ G L R L Y L +
Sbjct: 69 AYYLSANRNKRSIAIDIATEDGRALLHRLLARADVLVENYKVGGLARHGLDYPSLRQRYP 128
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
L+YCSVTGFG GPY R GYD + +GG++ +TG DG P KVG+ D+ TG+YA
Sbjct: 129 GLVYCSVTGFGQTGPYARRAGYDFLIQGMGGIMSLTGETDGTPMKVGVGIADVMTGMYAA 188
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
++AAL H+ TG+GQ+ID +LL +Q++ L+N G NYL + KR H N+VP+QV
Sbjct: 189 VGILAALRHRDATGEGQQIDISLLDSQIAWLVNAGTNYLASAEVPKRLANGHPNIVPYQV 248
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
F+T++G + + G+D Q++ C+V ++ +A D RY T
Sbjct: 249 FETADGPMILAVGNDGQFRRFCEVAGIEAVARDERYGT 286
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 2/123 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V ++ +A D RY T RV +RE +C+ ++A ++ + WL + V+ P VN
Sbjct: 269 FCEVAGIEAVARDERYGTNVARVRHREAVCEAVQAALRTRSRQYWLQSLEAVNVPCGPVN 328
Query: 61 SISQVFADEHIQD--IKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
+ +VF D H+Q+ L + G + ++ + S T R PP L EH D +
Sbjct: 329 DLREVFEDPHVQERGAHLRMPCDWARDGAVSLLANPLKLSRTPVSYRRAPPRLNEHVDEI 388
Query: 119 LKD 121
L+D
Sbjct: 389 LRD 391
>gi|433610981|ref|YP_007194442.1| putative acyl-CoA transferases/carnitine dehydratase [Sinorhizobium
meliloti GR4]
gi|429555923|gb|AGA10843.1| putative acyl-CoA transferases/carnitine dehydratase [Sinorhizobium
meliloti GR4]
Length = 394
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 131/280 (46%), Positives = 180/280 (64%), Gaps = 5/280 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL----S 271
PL +R+L+L RI+AGP+ LADLGA+VIKVE P GD+ R WGPPF+ + +
Sbjct: 4 PLKGIRVLELARILAGPWIGQTLADLGADVIKVESPA-GDDTRTWGPPFVTGEDDERLDA 62
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NR K+SV +DF T EGQ+ ++ LA Q DVL+ENF G L + L Y+ LS++N
Sbjct: 63 AYFHACNRGKRSVVLDFTTAEGQEAVRRLAAQSDVLLENFKVGGLAKYGLDYESLSKVNP 122
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+LIYCSVTGFG GPY R GYD I + G++ +TG PD P K+G+A D+ TGLY
Sbjct: 123 RLIYCSVTGFGQDGPYAHRAGYDYIVQGMSGIMDLTGEPDREPQKIGVAFADIFTGLYGV 182
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
AV AAL + +TG+GQ+ID LL +L N N+L +G +R G +H N+ P+QV
Sbjct: 183 IAVQAALAQRERTGEGQQIDMALLDCMTGVLANQALNFLVSGKAPRRLGNAHPNIAPYQV 242
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
F TS+G++ + G+D+Q+ C+++ LA D RY T A
Sbjct: 243 FPTSDGHLIVAVGNDRQFVKFCELLGRPDLAADARYRTNA 282
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 60/135 (44%), Gaps = 24/135 (17%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+++ LA D RY T A RV++R+ L E+ A+T + + L + P +N
Sbjct: 263 FCELLGRPDLAADARYRTNADRVQHRDSLTPELAAETAKYERDTLLEKLEASGVPGGPIN 322
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTP------------- 107
+++ VFAD I ++ + H A + T P VRTP
Sbjct: 323 TVADVFADPQIVHRQMRVDTPHTG-----------AAAGTSPGVRTPIRFSGATLALDCG 371
Query: 108 PPALGEHTDYVLKDL 122
P LGEHT VL ++
Sbjct: 372 VPRLGEHTAEVLAEI 386
>gi|103488357|ref|YP_617918.1| L-carnitine dehydratase/bile acid-inducible protein F [Sphingopyxis
alaskensis RB2256]
gi|98978434|gb|ABF54585.1| L-carnitine dehydratase/bile acid-inducible protein F [Sphingopyxis
alaskensis RB2256]
Length = 375
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 131/290 (45%), Positives = 181/290 (62%), Gaps = 4/290 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL----S 271
PL +R+++L R++AGP+C LLADLGAEV+KVE+P GD+ R+WGPPF+ + +
Sbjct: 6 PLEGIRVVELARVLAGPWCGQLLADLGAEVVKVERPGAGDDTREWGPPFVTGDDGEHLGA 65
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NR K+SV VD + EGQ + L DV++EN+ G L + L L
Sbjct: 66 AYYHSCNRGKRSVAVDIASAEGQAEARALLADADVVIENYKVGGLAKYGLDPAALRADFP 125
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+LI CS+TGFG GPY R GYD I ++ G + +TG PDGPP K GIA D+ TGLY+
Sbjct: 126 RLIVCSITGFGQTGPYAHRAGYDYIIQAMSGFMSLTGEPDGPPQKAGIAYADIFTGLYSA 185
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
AV+AAL + TG G ID LL +QV++L N AN+L +G+ KR G +HANVVP+QV
Sbjct: 186 VAVLAALRRRDVTGSGAHIDMALLDSQVAVLANQAANFLASGVAPKRMGNAHANVVPYQV 245
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
F T++G + I G+D QY+ +C ++ + D R+ T A LA LI
Sbjct: 246 FATADGQLVIAVGNDAQYRRLCAILGVPEWGADSRFATNAARLANRDELI 295
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 33/71 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ + D R+ T A R+ NR+ L + AK + L + P +N
Sbjct: 266 LCAILGVPEWGADSRFATNAARLANRDELIPLLAAKIATWEAQPLSLALEAEGVPAGPIN 325
Query: 61 SISQVFADEHI 71
++Q+FAD +
Sbjct: 326 DLAQLFADPQV 336
>gi|452839377|gb|EME41316.1| hypothetical protein DOTSEDRAFT_135533 [Dothistroma septosporum
NZE10]
Length = 397
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 126/277 (45%), Positives = 187/277 (67%), Gaps = 10/277 (3%)
Query: 225 LTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE--------LSTYFTC 276
+TR++AGP+CT +L DLGAEVIK+E P GD+ R WGPP+ + E S YF
Sbjct: 1 MTRVLAGPYCTQILGDLGAEVIKIEHPTRGDDTRAWGPPYASYKEDSGQQGQGESAYFLA 60
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
VNRNKKS+ + F++P G +I+ LAK CDVLVEN++PG L + N+ Y+ + ++N +IY
Sbjct: 61 VNRNKKSIGLSFQSPAGVEILHKLAKDCDVLVENYLPGALKKYNMDYESVFKVNPGIIYA 120
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S+TG+G GP+ R GYD++ + GL+HITGH DGPP KVG+A DL TGLY ++MA
Sbjct: 121 SITGYGQTGPHSKRAGYDVMVEAEMGLMHITGHRDGPPAKVGVAVTDLTTGLYTSNSIMA 180
Query: 397 ALLHKYKT-GKGQKIDCNLLSTQVSMLINVGANYLNAG-IEGKRWGTSHANVVPHQVFKT 454
AL+ + K G+GQ ID +L Q++ L N+ ++ L +G + RWGT+H ++VP++ F+T
Sbjct: 181 ALIARGKNKGQGQHIDVSLADCQIATLANIASSCLISGKPDTGRWGTAHPSIVPYKGFRT 240
Query: 455 SNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
+G + +G G+D+ + +C+ + + ALD RY T A
Sbjct: 241 KDGDILLGGGNDRLFGVLCEKLGKKEWALDERYRTNA 277
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 81/139 (58%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + + ALD RY T A RV+ R L + IE T KTT+EWL +G PYA +N
Sbjct: 258 LCEKLGKKEWALDERYRTNADRVKRRGELEEMIEEITTTKTTKEWLETLEGSGMPYAPIN 317
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ EH Q +V E+ H G +K+V P V +S ++P +RTPPP LG+HTD VL
Sbjct: 318 DVKATLEHEHTQYRNMVTEVDHPSCGPMKLVSPPVKFSQSKPSIRTPPPTLGQHTDEVLS 377
Query: 121 DLLNYDETTIAKLKEKKIL 139
+LL + I LK++ ++
Sbjct: 378 ELLGLGSSDIEALKKEGVV 396
>gi|333367429|ref|ZP_08459694.1| CAIB/BAIF family protein [Psychrobacter sp. 1501(2011)]
gi|332978711|gb|EGK15405.1| CAIB/BAIF family protein [Psychrobacter sp. 1501(2011)]
Length = 421
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 136/290 (46%), Positives = 183/290 (63%), Gaps = 8/290 (2%)
Query: 207 ALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN 266
A S+ + L +++LDL+R++AGP CT +LADLGAEVIKVE+P+ GDE R W PPF
Sbjct: 16 AAKSKTSTQALQGIKVLDLSRVLAGPSCTQILADLGAEVIKVERPLIGDETRHWTPPFFE 75
Query: 267 NTE------LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLN 320
+ S Y+ VNRNKKS+ VD PEGQ IIK LA + DVLVENF G L +
Sbjct: 76 DIHDDEPQATSAYYATVNRNKKSMTVDMSKPEGQAIIKKLASESDVLVENFKVGGLKKYG 135
Query: 321 LGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIA 380
L Y+ L +N +LIY S+TGFG GP +PGYD I+ + GL+ +TG DG P K+G+
Sbjct: 136 LDYESLKVLNPRLIYASLTGFGQTGPDAHKPGYDFISQGLSGLMSLTGQADGAPQKIGVP 195
Query: 381 SIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWG 440
+DL GL + AALL + TGKGQ +D LL + VSML N G NYL +GI R G
Sbjct: 196 VVDLFAGLELTIGIQAALLARQHTGKGQWVDVALLDSAVSMLANFGMNYLASGITPSRLG 255
Query: 441 TSHANVVPHQVFKTSNG-YVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+H ++ P+QVFK ++ + + G+D Q+ ++ KV+NL+ L D Y T
Sbjct: 256 NAHPSICPYQVFKAADSKHFIVACGNDSQFANLSKVLNLE-LHQDADYST 304
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+ KV+NL+ L D Y T RV+NR+ L +++ + +KT +EWL + Q V+ P A +N
Sbjct: 288 LSKVLNLE-LHQDADYSTNPQRVKNRQSLTQQLAVQFNKKTRDEWLQLLQSVTVPCAPIN 346
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+++ + +V + I+++G + S T + TPPP LG T VL
Sbjct: 347 DVTEAINLPQVTARDMVVGFDNSS---IRVLGSPIKLSETPVKYHTPPPKLGADTHSVLT 403
Query: 121 DLLNYDETTIAKLKEKKIL 139
D L + IA L+ I+
Sbjct: 404 D-LGFSLQQIAALERDHIV 421
>gi|399992430|ref|YP_006572670.1| hypothetical protein PGA1_c12340 [Phaeobacter gallaeciensis DSM
17395 = CIP 105210]
gi|398656985|gb|AFO90951.1| hypothetical protein PGA1_c12340 [Phaeobacter gallaeciensis DSM
17395 = CIP 105210]
Length = 406
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 130/293 (44%), Positives = 187/293 (63%), Gaps = 6/293 (2%)
Query: 203 SLDLALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTG-DECRKWG 261
S D A + P PL+ +++LDL+RI+AGP CT +L DLGA V+KVE P +G D+ R+WG
Sbjct: 3 SSDPAADGKLPHGPLTGIKVLDLSRILAGPTCTQMLGDLGASVLKVENPQSGGDDTRQWG 62
Query: 262 PPFLNNTE-----LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKL 316
PP++ + E LS YF NRNK+SV VD T EGQQ+I+ LA D+L+ENF PG L
Sbjct: 63 PPYVIDAEGQQSDLSAYFMAANRNKRSVEVDISTVEGQQVIRRLAADADILLENFKPGGL 122
Query: 317 DRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCK 376
+ L Y L L+Y S++G+G GP +PGYD++A GG++ +TG PDG P K
Sbjct: 123 AKYGLDYDSLHAEFPHLVYGSISGYGQTGPNAQKPGYDLMAQGYGGIMSLTGEPDGRPMK 182
Query: 377 VGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEG 436
VG+ D+ G+YA ++AAL +K +TG+GQ++D L+ Q++ LIN G LN G
Sbjct: 183 VGVGIADVMCGMYACVGILAALRYKEQTGEGQQVDIALVDAQIAWLINEGVATLNTGTAP 242
Query: 437 KRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
KR G H ++VP+ +++TS+G+V + G+D Q+ + L LA DPR+ T
Sbjct: 243 KRRGNEHPSIVPYGLYETSDGHVILAVGNDAQFGRFLSFLGLDGLARDPRFAT 295
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Query: 5 MNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQ 64
+ L LA DPR+ T R++NR+ L + + +T+ + + P V ++ Q
Sbjct: 282 LGLDGLARDPRFATNPARLQNRDALADILVPALRQYSTDAVIAAMEARKVPAGPVQTLDQ 341
Query: 65 VFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTD 116
VFA + I ++ E++ G ++++G + +S T R PP G+ TD
Sbjct: 342 VFATDQIAAREMTIEMTSAA-GPVRLLGNPLKFSRTPVTYRHAPPTCGDSTD 392
>gi|330826038|ref|YP_004389341.1| formyl-CoA transferase [Alicycliphilus denitrificans K601]
gi|329311410|gb|AEB85825.1| Formyl-CoA transferase [Alicycliphilus denitrificans K601]
Length = 413
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 128/282 (45%), Positives = 181/282 (64%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
L+ +++LDL+R++AGP+CT +LADLGA+V+KVE+P GD+ R WGPPFL + T +
Sbjct: 9 LAGIKVLDLSRVLAGPWCTQMLADLGADVVKVERPAAGDDTRHWGPPFLQDGAGRDTREA 68
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+YFT NRNK+S+ VD PEGQ +++ +A+Q DV+VENF G L R L Y L +N
Sbjct: 69 SYFTACNRNKRSITVDMAHPEGQALLRRMAQQADVVVENFKVGGLTRYGLDYDSLRALNP 128
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TGFG GPY R GYD++ + GL+ ITGH P G P KVG+A ID+ TG
Sbjct: 129 RLVYCSITGFGQTGPYAGRAGYDLMVQAACGLMSITGHADGEPGGGPLKVGVAVIDVFTG 188
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA A++AAL + +G+GQ ID LL +++L N A +L G R G H ++
Sbjct: 189 LYASNAILAALNARNASGEGQHIDMALLDVGMAVLANQAAGFLATGQAPGRAGNIHPSLA 248
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+T +G V + G+D Q+ C + A D R+ T
Sbjct: 249 PYQDFQTRDGNVLLAIGNDGQFARFCAAVGHDAWAQDERFAT 290
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 69/143 (48%), Gaps = 6/143 (4%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C + A D R+ T RV +R L + + +++T EW+ + + + P +N
Sbjct: 273 FCAAVGHDAWAQDERFATNTARVRHRAALLERLAPLMRQRSTAEWIALLEDKAVPCGPIN 332
Query: 61 SISQVFADEHIQ----DIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTD 116
+I+Q F D ++ + L ++ + + + V + S T R PPALG+HTD
Sbjct: 333 TIAQAFDDPQVRARGTRVDLPRD-AGDGIATVATVASPMRLSATPVAYRGAPPALGQHTD 391
Query: 117 YVLKDLLNYDETTIAKLKEKKIL 139
+L++ L D IA L+E + +
Sbjct: 392 EILRE-LGLDAPAIAALRESRAV 413
>gi|359791277|ref|ZP_09294141.1| L-carnitine dehydratase/bile acid-inducible protein F
[Mesorhizobium alhagi CCNWXJ12-2]
gi|359252793|gb|EHK56002.1| L-carnitine dehydratase/bile acid-inducible protein F
[Mesorhizobium alhagi CCNWXJ12-2]
Length = 391
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 127/281 (45%), Positives = 177/281 (62%), Gaps = 4/281 (1%)
Query: 213 PSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE--- 269
P+ PL VR+++L RI+AGP+ LLADLGA+VIKVE P GD+ RKWGPPF+ +
Sbjct: 2 PNPPLQGVRVIELARILAGPWAGQLLADLGADVIKVESPDGGDDTRKWGPPFVKGKDGEN 61
Query: 270 -LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSE 328
+ Y+ NR K+S+ +DF TPEG + ++ L DVL+ENF G L + L Y+ L +
Sbjct: 62 LSAAYYHACNRGKRSIAIDFSTPEGAETVRRLIATADVLIENFKLGGLKKYGLDYESLRK 121
Query: 329 INSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGL 388
IN +L+YCS+TGFG GPY R GYD I + GL+ ITG G P KVG+A D+ TGL
Sbjct: 122 INPKLVYCSITGFGQDGPYAPRAGYDFIIQGMSGLMSITGPAGGEPQKVGVAVTDIFTGL 181
Query: 389 YAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVP 448
Y+ A+ AAL H TG+GQ +D L Q+S+L N N+L +G + G +H N+ P
Sbjct: 182 YSVIAIQAALRHAEATGQGQHVDMALFDAQISVLANQNLNFLVSGTPPVQMGNAHPNIAP 241
Query: 449 HQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
++V S+G+ + G+D Q++ C V+ L+ LA DP Y T
Sbjct: 242 YEVLPVSDGHFILAVGNDSQFRKFCAVVGLEELAGDPAYAT 282
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C V+ L+ LA DP Y T RV NR L + I A+ + +E L + + P + +N
Sbjct: 265 FCAVVGLEELAGDPAYATNEARVANRAALRESIVARLADFDRDELLTLLEKAGVPASPIN 324
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I ++FAD + ++ + V + S T P P LGEHT +L
Sbjct: 325 NIGEMFADPQTIARGMRLDLDDSHGNTLPSVRSPMVLSETPLVYERPSPRLGEHTAEILA 384
Query: 121 DL 122
+L
Sbjct: 385 EL 386
>gi|241765710|ref|ZP_04763658.1| L-carnitine dehydratase/bile acid-inducible protein F [Acidovorax
delafieldii 2AN]
gi|241364427|gb|EER59540.1| L-carnitine dehydratase/bile acid-inducible protein F [Acidovorax
delafieldii 2AN]
Length = 423
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 133/298 (44%), Positives = 189/298 (63%), Gaps = 13/298 (4%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ +++LDL+R++AGP+CT +LADLGA+V+KVE+P GD+ R+WGPPFL N+T +
Sbjct: 11 LAGIKVLDLSRVLAGPWCTQMLADLGADVVKVERPGVGDDTRQWGPPFLKDAEGNDTHQA 70
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+YFT NRNK+SV +D T EGQ +IK +A+Q D++VENF G L + L + L +N
Sbjct: 71 SYFTACNRNKRSVTIDMATAEGQALIKQMAQQADIVVENFKVGGLKQYGLDHASLRALNP 130
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+LIYCSVTGFG GPY +R GYD++ ++ GL+ ITG P G P +VG+A IDL TG
Sbjct: 131 RLIYCSVTGFGQDGPYAERAGYDLMVQAMTGLMSITGQADTEPGGGPMRVGVAVIDLFTG 190
Query: 388 LYAHGAVMAALLHK----YKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSH 443
+YA A++AAL + TG+GQ ID LL +++L N A +L G R G SH
Sbjct: 191 IYASNAILAALHVRDNAVNGTGQGQHIDMALLDVGMAVLANQAAGFLATGQTPGRMGNSH 250
Query: 444 ANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
++ P+Q F T +G + + G+D Q+Q C A D R+ T L + + LI
Sbjct: 251 PSLAPYQDFPTQDGNMLLAIGNDGQFQRFCAAAGQPQWASDARFATNTLRVKHRAELI 308
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 69/146 (47%), Gaps = 8/146 (5%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C A D R+ T LRV++R L +E T +TT W+ + + + P +N
Sbjct: 279 FCAAAGQPQWASDARFATNTLRVKHRAELIPAMETVTRTRTTAAWIALLEDKAVPCGPIN 338
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGD-------IKIVGPAVAYSLTQPEVRTPPPALGE 113
+I+Q F D ++ L + K G+ I V + S T P +R PPALG+
Sbjct: 339 TIAQAFDDAQVKARGLAVSLPRWKDGEAGDGVQHITGVASPLRLSSTPPVLRNAPPALGQ 398
Query: 114 HTDYVLKDLLNYDETTIAKLKEKKIL 139
HTD VL + L D IA L+E K +
Sbjct: 399 HTDEVLSE-LGLDAQAIAALRENKTI 423
>gi|120610661|ref|YP_970339.1| formyl-CoA transferase [Acidovorax citrulli AAC00-1]
gi|120589125|gb|ABM32565.1| Formyl-CoA transferase [Acidovorax citrulli AAC00-1]
Length = 425
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 130/291 (44%), Positives = 187/291 (64%), Gaps = 9/291 (3%)
Query: 220 VRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELSTYF 274
+R+LDL+R++AGP+CT +LADLGA+V+KVE+P GD+ R+WGPPFL + T+ + YF
Sbjct: 19 IRVLDLSRVLAGPWCTQVLADLGADVVKVERPGLGDDTRQWGPPFLKDAQGRETDQAAYF 78
Query: 275 TCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLI 334
T NRNK+S+ +D PEGQ +I+ +A + DV+VENF G L + L ++ L +N +LI
Sbjct: 79 TACNRNKRSITIDMAHPEGQALIRAMALRADVVVENFKVGGLKQYGLDHESLRALNPRLI 138
Query: 335 YCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATGLYA 390
YCSVTGFG GPY R GYD++ ++ GL+ ITG P G P +VG+A IDL TGLYA
Sbjct: 139 YCSVTGFGQDGPYAARAGYDLMVQALTGLMDITGRADGEPGGGPLRVGVAVIDLFTGLYA 198
Query: 391 HGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQ 450
A++AAL + TG+GQ ID LL +++L N A +L G +R G SH ++VP+Q
Sbjct: 199 SNAILAALHARQHTGEGQHIDMALLDVGMAVLANQAAGFLATGESPRRQGNSHPSLVPYQ 258
Query: 451 VFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
F T++G + + G+D Q+ C A D R+ T L + + L+
Sbjct: 259 DFPTADGAMLLAIGNDGQFARFCTAAGRPEWASDARFRTNTLRVVHRAELV 309
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 9/147 (6%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C A D R+ T LRV +R L +E+ T ++T EW+ + + + P +N
Sbjct: 280 FCTAAGRPEWASDARFRTNTLRVVHRAELVPLMESVTRTRSTAEWVALLEDKAVPCGPIN 339
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGD--------IKIVGPAVAYSLTQPEVRTPPPALG 112
SI+Q F D ++ L E+ G ++ V + S T P +R PPALG
Sbjct: 340 SIAQAFNDPQVRARGLAVELPRRPDGSAGADGIATVRGVASPLRLSATPPVLRHAPPALG 399
Query: 113 EHTDYVLKDLLNYDETTIAKLKEKKIL 139
+HT+ +L D + D +A+L+ ++
Sbjct: 400 QHTEEILAD-MGLDAAAVARLRGAGVV 425
>gi|118589598|ref|ZP_01547003.1| CAIB/BAIF family protein [Stappia aggregata IAM 12614]
gi|118437684|gb|EAV44320.1| CAIB/BAIF family protein [Labrenzia aggregata IAM 12614]
Length = 430
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 137/288 (47%), Positives = 176/288 (61%), Gaps = 9/288 (3%)
Query: 208 LSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN 267
LSS P LS + +LDL+RI+AGP CT +L DLGAEVIK+E+P GD+ R WGPPFL +
Sbjct: 4 LSSAAPGA-LSGLVVLDLSRILAGPTCTQILGDLGAEVIKIERPGRGDDTRGWGPPFLKD 62
Query: 268 TE-----LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLG 322
E S Y+ NRNK SV +D +PEGQQ+I DLA + D+LVENF G L R L
Sbjct: 63 GEGRETGESAYYLSSNRNKASVAIDLASPEGQQLIADLAAKADILVENFKVGDLKRRGLD 122
Query: 323 YKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD---GPPCKVGI 379
Y L N +LIYCS+TGFG GPY R GYD + +GG++ +TG PD G K G+
Sbjct: 123 YDTLKARNPRLIYCSITGFGQTGPYAQRAGYDFLIQGMGGIMSLTGFPDEDGGTETKCGV 182
Query: 380 ASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRW 439
D+ G+YA +++AAL H+ TG+GQ ID +LL QVS LIN G YL +G R
Sbjct: 183 GIADVMCGMYATVSILAALNHRNSTGEGQSIDISLLDAQVSWLINQGVAYLTSGKVPGRL 242
Query: 440 GTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
G H +VP++ F S+ + G+D Q+ CKV LA DP Y
Sbjct: 243 GNGHPTIVPYETFPASDQSFILAVGNDSQFVKFCKVAGAPELADDPLY 290
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
CKV LA DP Y A RV NR L +I T++KT W+ + P VN
Sbjct: 275 FCKVAGAPELADDPLYAKNADRVRNRTELIPKIRRLTIKKTAAAWIAELEAAGVPCGPVN 334
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ QVFAD + ++ + H G++ ++G + T R+ PP +G T VL
Sbjct: 335 DLEQVFADPQVMARQMRITLPHPLGGEVDLIGSPINLEKTSVAYRSAPPLVGADTTDVLT 394
Query: 121 DLLNYDETTIAKLKEKKILGL 141
L + T+++L + +L L
Sbjct: 395 RHLGLSQATLSELAGRGVLDL 415
>gi|333911840|ref|YP_004485572.1| fomryl-CoA transferase [Delftia sp. Cs1-4]
gi|333742040|gb|AEF87217.1| Formyl-CoA transferase [Delftia sp. Cs1-4]
Length = 433
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 133/284 (46%), Positives = 184/284 (64%), Gaps = 10/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L ++R+LDL+R++AGP+CT LAD+GA+VIK+E+P GD+ R WGPPF N ++ +
Sbjct: 23 LGHLRVLDLSRVLAGPWCTQNLADMGADVIKIEKPGEGDDTRHWGPPFFPDAQGNPSDNA 82
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NRNK+SV VD T EGQQ+I++LA Q DV+VENF L R L Y LS +N
Sbjct: 83 VYFAACNRNKRSVTVDMATAEGQQLIRELAMQSDVVVENFKTRGLKRYGLDYASLSALNP 142
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+LIYCSVTGFG GPY R GYD++ ++ GL+ ITG P G P +VG+A IDL TG
Sbjct: 143 RLIYCSVTGFGQTGPYAPRAGYDLLVQAMSGLMSITGRADSEPGGGPLRVGVAVIDLFTG 202
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA A++ A+ ++ TG+GQ ID LL +++L N GA +LN G R G +H +VV
Sbjct: 203 MYATTAILGAVEARHHTGRGQHIDMALLDVAMAVLANQGAGFLNTGHVPGRQGNTHPSVV 262
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P+Q F T++G + + G+D Q+ C + A D R+ T A
Sbjct: 263 PYQDFPTADGRMLLAIGNDGQFARFCGAAGVD-WARDERFATNA 305
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 13/140 (9%)
Query: 11 ALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEH 70
A D R+ T A RV +R+ L + T + T EW+ + + + P +N I Q F D
Sbjct: 296 ARDERFATNAGRVIHRDALIPLMAELTRGRPTAEWIALLEDKAVPCGPINHIGQAFDDAQ 355
Query: 71 IQDIKLVKEISHEKY-------GDI--KIVGPAVAYSL--TQPEVRTPPPALGEHTDYVL 119
++ L + E+Y G+ ++V A L T +R PPALG+HTD VL
Sbjct: 356 VRARGL--RVEQERYPGATPPAGETINRVVTTASPLRLSDTPTTLRHAPPALGQHTDEVL 413
Query: 120 KDLLNYDETTIAKLKEKKIL 139
++ L D + L+ K ++
Sbjct: 414 RERLGLDAQQLQALRGKGVV 433
>gi|410420161|ref|YP_006900610.1| hypothetical protein BN115_2374 [Bordetella bronchiseptica MO149]
gi|427818992|ref|ZP_18986055.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
gi|427822366|ref|ZP_18989428.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
gi|408447456|emb|CCJ59130.1| conserved hypothetical protein [Bordetella bronchiseptica MO149]
gi|410569992|emb|CCN18126.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
gi|410587631|emb|CCN02678.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
Length = 415
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 127/286 (44%), Positives = 184/286 (64%), Gaps = 8/286 (2%)
Query: 215 LPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE----L 270
+P+ +R+LDL+R++AGP+CT +LAD GA+VIK+E+P GD+ R WGPPF + + +
Sbjct: 17 MPMDGIRVLDLSRVLAGPWCTQMLADFGADVIKIERPGQGDDSRAWGPPFYESADGHERV 76
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
S YF NR K+SVC+D ++ +Q +++LA + DVLVENF G L R L Y LS +N
Sbjct: 77 SAYFCAANRGKRSVCLDLESEADRQALRELALRSDVLVENFKAGSLARHGLDYATLSALN 136
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLAT 386
+L+YCS+TG+G GPY RPGYD I ++GG++ +TG PD G P K GI IDL T
Sbjct: 137 PRLVYCSITGYGQTGPYAARPGYDSIIQAVGGMMSVTGLPDDAAGGGPQKTGIPIIDLMT 196
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANV 446
G+YA V+ AL + +G+GQ +D +L+ QVS L + AN+L G +R G H V
Sbjct: 197 GVYACCGVLMALREREASGQGQHLDLSLMDVQVSALSTLAANFLACGQAPQRNGNEHPTV 256
Query: 447 VPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
VP + +G + + G+D+Q+Q +C+ + + LA DPRY T L
Sbjct: 257 VPGDAVQCLDGPLMLMVGNDRQFQRLCRHLGRESLARDPRYATNEL 302
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 60/122 (49%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + + LA DPRY T LRV+ + L ++ +T + WL P +
Sbjct: 282 LCRHLGRESLARDPRYATNELRVQGKNALMAQLREAFRGQTRQYWLERLLAEGIPCGPIQ 341
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++++V AD H++ LV +G+I+ +G A+ S T P LGEHT+ VL
Sbjct: 342 TVAEVLADPHVRHRALVAAAPDPVFGEIRAMGSALRMSRTPARHGRAPTVLGEHTEAVLS 401
Query: 121 DL 122
L
Sbjct: 402 SL 403
>gi|307728717|ref|YP_003905941.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
sp. CCGE1003]
gi|307583252|gb|ADN56650.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
sp. CCGE1003]
Length = 395
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 127/287 (44%), Positives = 181/287 (63%), Gaps = 9/287 (3%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE---- 269
+ PLS++R+LDL+RI+AGP+ + ADLGA+VIK+E+P GD+ R WGPPFL ++
Sbjct: 2 TAPLSHIRVLDLSRIMAGPWSGQIFADLGADVIKIERPGAGDDTRSWGPPFLQASDGTPS 61
Query: 270 -LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSE 328
S YF VNR K+SV VD TPEGQ ++ +A QCDV++ENF G L+R LGY L
Sbjct: 62 KESGYFLAVNRGKRSVAVDLATPEGQATVRAIAAQCDVVLENFKAGTLERYGLGYDDLKA 121
Query: 329 INSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDL 384
+ LIYCS+TGFG GP YD + ++GGL+ +TG P G P KVG+ +D+
Sbjct: 122 VRPDLIYCSITGFGQDGPKAGHAAYDFMIQAMGGLMSVTGERDDLPGGGPQKVGVPIVDI 181
Query: 385 ATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHA 444
TG+YA V+AAL + +TG+G+ +D +L QV+ L N NYL +G R G H
Sbjct: 182 MTGMYATIGVLAALARRAETGEGEHVDIAMLDVQVAFLANQAMNYLVSGKVPGRSGNRHP 241
Query: 445 NVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
N+ P VF+ +G++ + G+D Q++ C+V+ LA+D R+ T A
Sbjct: 242 NIQPQDVFRCRDGHLVLAVGNDGQFRKFCEVIARTELAVDERFATNA 288
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V+ LA+D R+ T A RV N L I + WL + V+ P +N
Sbjct: 269 FCEVIARTELAVDERFATNAQRVRNLPELLAIIREALLADDLAVWLAKLEAVAVPCGPIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I VF DE ++ ++++ + H G + V + PP LG+HTD VL+
Sbjct: 329 TIPMVFEDEQVRHREMLRHLPHPVSGRVPQVVSPIRLRNAPLAFDRAPPTLGQHTDEVLR 388
Query: 121 DL 122
+L
Sbjct: 389 EL 390
>gi|259415862|ref|ZP_05739782.1| L-carnitine dehydratase/bile acid-inducible protein F [Silicibacter
sp. TrichCH4B]
gi|259347301|gb|EEW59078.1| L-carnitine dehydratase/bile acid-inducible protein F [Silicibacter
sp. TrichCH4B]
Length = 370
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 129/287 (44%), Positives = 180/287 (62%), Gaps = 3/287 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL--NNTELSTY 273
PL +++++L RI+AGP+ LADLGAEV+KVE P GD+ R+WGPPF+ + + + Y
Sbjct: 3 PLQGLKVVELARILAGPWIGQALADLGAEVVKVESP-EGDDTRRWGPPFVERDGDKTAAY 61
Query: 274 FTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQL 333
+ NR K V DF+TPEGQ ++DL D+L+ENF G L + L Y+ L+E+N +L
Sbjct: 62 YYAANRGKTCVTADFRTPEGQAKVRDLVAGADILIENFKVGGLAKYGLDYESLAEVNPRL 121
Query: 334 IYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGA 393
IYCSVTGFG GPY R GYD + + GL+ ITG +G P KVG+A D+ TGLY
Sbjct: 122 IYCSVTGFGQDGPYASRAGYDFLLQGMSGLMSITGAAEGEPQKVGVAITDVVTGLYGSIG 181
Query: 394 VMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFK 453
++AA+ +++TG+GQ ID +LL +ML N NYL G R G H N+ P+QV
Sbjct: 182 ILAAVEQRHRTGRGQHIDMSLLDCATAMLANQNMNYLVTGNSPTRMGNEHPNIAPYQVMA 241
Query: 454 TSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHL 500
+G+V + G+D Q+ +C V+NL L DPR+LT L +A L
Sbjct: 242 VRDGHVILAVGNDGQFTRLCDVLNLGGLKDDPRFLTNQLRVANRGDL 288
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C V+NL L DPR+LT LRV NR L + A + + + L + + P +N
Sbjct: 260 LCDVLNLGGLKDDPRFLTNQLRVANRGDLTPMLTAALAQWSQADLLAALEAATVPAGPIN 319
Query: 61 SISQVFADEHIQ 72
+I Q F D I+
Sbjct: 320 TIGQAFDDAQIK 331
>gi|424885223|ref|ZP_18308834.1| putative acyl-CoA transferase/carnitine dehydratase [Rhizobium
leguminosarum bv. trifolii WSM2012]
gi|424886253|ref|ZP_18309861.1| putative acyl-CoA transferase/carnitine dehydratase [Rhizobium
leguminosarum bv. trifolii WSM2012]
gi|393175604|gb|EJC75646.1| putative acyl-CoA transferase/carnitine dehydratase [Rhizobium
leguminosarum bv. trifolii WSM2012]
gi|393176985|gb|EJC77026.1| putative acyl-CoA transferase/carnitine dehydratase [Rhizobium
leguminosarum bv. trifolii WSM2012]
Length = 399
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 120/278 (43%), Positives = 178/278 (64%), Gaps = 4/278 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE----LS 271
PL+ +R+++L R++AGP+ +LADLGA+VIKVE P GD+ R+WGPPF+ + +
Sbjct: 9 PLAGIRVIELARVLAGPWAGQMLADLGADVIKVENPDGGDDTRQWGPPFVEGADGKNLSA 68
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NR K+S+ D KTPEGQ +++ L DV++ENF G L + L Y L ++N
Sbjct: 69 AYYHAANRGKRSITADLKTPEGQDLVRRLVSTADVVIENFKLGGLVKYGLDYDSLRKLNP 128
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+L+YCS+TGFG GPY GYD I + G + ITG PDG P K G+A D+ TG+YA
Sbjct: 129 KLVYCSITGFGQTGPYAGLAGYDYIVQGMSGFMSITGEPDGQPMKAGVAIADIFTGIYAV 188
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A+ AAL+H KTG+GQ +D LL Q ++L N NYL +G R G +H N+ P++V
Sbjct: 189 SAIEAALIHALKTGEGQLVDMALLDVQSAVLANQNMNYLVSGAAPTRLGNAHPNISPYEV 248
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
++GY+ + G+D Q++ +C ++ L+ +A D R+ T
Sbjct: 249 VPVADGYLILAVGNDGQFRRLCTILGLETIAGDERFST 286
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ L+ +A D R+ T RV NR + I +T++ + L + + P +N
Sbjct: 269 LCTILGLETIAGDERFSTNKARVANRGDVRLLISTETLKWQKADLLKACEENAVPSGAIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I ++FAD I+ L +++ I V V S T P P LGEH +L
Sbjct: 329 TIEEMFADPQIEARGLRIDLTDAAGTVIPGVRTPVVLSETPLRYTRPSPRLGEHQTEILA 388
Query: 121 DL 122
+L
Sbjct: 389 EL 390
>gi|33598696|ref|NP_886339.1| CaiB/BaiF family protein [Bordetella parapertussis 12822]
gi|33574826|emb|CAE39487.1| CaiB/BaiF family protein [Bordetella parapertussis]
Length = 402
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 125/286 (43%), Positives = 180/286 (62%), Gaps = 2/286 (0%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL +R+L+LTR+++GPFCTMLL DLGAEVIK+E+PV GD+ R +GPPF S YF
Sbjct: 3 PLHGIRVLELTRVVSGPFCTMLLGDLGAEVIKIEEPVHGDDSRAFGPPFSGGE--SAYFL 60
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNRNK+S +D K PEG+++++ LA+ DV+++NF PG + RL LGY L N +L+
Sbjct: 61 SVNRNKRSCAIDLKQPEGKELLRALARASDVVIDNFRPGTMARLGLGYDALRAANPRLVS 120
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
CS+TGFG GP RPGYD+I G++ ITG P G P K+G + DL TG +A A+
Sbjct: 121 CSITGFGDSGPDAQRPGYDLIIQGESGIMDITGDPAGLPTKIGTSIADLITGQFASQAIT 180
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
AALL + +G+G+ + +L S+L Y G R G +H + P++ F+ +
Sbjct: 181 AALLERASSGQGRHVGIAMLDCMASLLTFNAGIYFTTGASPTRRGNAHPTIAPYETFQAA 240
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
+G++ IG +DK +Q C V+ LA DPRY A +A+ + L+
Sbjct: 241 DGWLNIGVANDKFWQLFCGVIARPDLADDPRYARAADRVALRAELV 286
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 55/139 (39%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C V+ LA DPRY A RV R L I A K W+ + P +
Sbjct: 257 FCGVIARPDLADDPRYARAADRVALRAELVPRIAALIAAKPRAYWIAALREAGVPCGDIR 316
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
S+++V E + +V ++ H G ++ + + PP LGEHT +L
Sbjct: 317 SVAEVCEAEQLVSRGMVFDMPHPSAGQVRNIASPFRFDGAGTAAHRAPPLLGEHTAAILC 376
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ +A L + I+
Sbjct: 377 EHAGLQPERVADLAARGII 395
>gi|159900138|ref|YP_001546385.1| L-carnitine dehydratase/bile acid-inducible protein F
[Herpetosiphon aurantiacus DSM 785]
gi|159893177|gb|ABX06257.1| L-carnitine dehydratase/bile acid-inducible protein F
[Herpetosiphon aurantiacus DSM 785]
Length = 388
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 126/276 (45%), Positives = 178/276 (64%), Gaps = 3/276 (1%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTY 273
S PL + +LDL+R++AGP+CTM+L DLGA+VIKVE P GD+ R+WGPPF+ S Y
Sbjct: 3 SSPLDGLLVLDLSRVLAGPYCTMILGDLGADVIKVEAP-QGDDTRRWGPPFVAGE--SAY 59
Query: 274 FTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQL 333
+ VNRNK+S+ D KT +I+ +A D++VENF PG L+R L L E N +L
Sbjct: 60 YLAVNRNKRSLVADLKTATDAALIRTIANHSDIVVENFRPGTLERFGLSLASLREQNPRL 119
Query: 334 IYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGA 393
I +++G G+ GP + PGYD I + GL+ ITG +G KVG+A +DL TG+ A A
Sbjct: 120 ITLTISGMGATGPEAELPGYDFIVQATAGLMSITGPAEGEASKVGVAVVDLTTGMLASNA 179
Query: 394 VMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFK 453
++AAL + +TG GQ ID +LL QV+ L NVG+ YL G E R+G +H +VP+Q F+
Sbjct: 180 ILAALYARERTGLGQHIDISLLEAQVAWLANVGSAYLVTGEEPNRYGNAHPTIVPYQTFE 239
Query: 454 TSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
S+G + G+D+Q+Q +C V+ A DPR+ T
Sbjct: 240 ASDGAFALAVGNDRQWQQLCAVLQQPAWAEDPRFST 275
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 58/118 (49%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C V+ A DPR+ T RV+ R L + + +K + EW+ + Q P V
Sbjct: 258 LCAVLQQPAWAEDPRFSTNPQRVQYRSALVDLLNHQFGQKPSAEWVALIQAAGIPVGAVR 317
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
S+ QV D + ++V + H GD+K++G +S T +R PP LG+H+ +
Sbjct: 318 SVGQVLNDPQVLAREMVVSVPHPTIGDLKVLGIPFKFSATPASIRLAPPLLGQHSQEI 375
>gi|265999194|ref|ZP_05465331.2| CAIB/BAIF family protein [Brucella melitensis bv. 2 str. 63/9]
gi|263092621|gb|EEZ16842.1| CAIB/BAIF family protein [Brucella melitensis bv. 2 str. 63/9]
Length = 402
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 131/272 (48%), Positives = 176/272 (64%), Gaps = 9/272 (3%)
Query: 225 LTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELSTYFTCVNR 279
++R++AGP+C +LADLGAEVIK+E+P TGD+ R WGPP++ N T ++Y+ NR
Sbjct: 1 MSRVLAGPWCGQILADLGAEVIKIERPRTGDDTRDWGPPWMKDEQGNPTREASYYQSANR 60
Query: 280 NKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVT 339
K SV ++ +PEGQ +++ + +CDVL+EN+ G L + L Y+ LS IN L+YCSVT
Sbjct: 61 GKFSVALNIASPEGQDLLRKMVAECDVLIENYKAGSLAKYGLDYETLSAINPGLVYCSVT 120
Query: 340 GFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATGLYAHGAVM 395
GFG GP PGYD I IGGL+ ITG P G P KVG+A DL TGLY+ A+
Sbjct: 121 GFGQTGPRAPEPGYDFIIQGIGGLMSITGERDDKPGGGPQKVGVAVADLMTGLYSAIAIE 180
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
AALL + KTGKGQ ID LL QV+ L N NYL +G R+G +HAN+VP+QVF+ S
Sbjct: 181 AALLSRAKTGKGQHIDMALLDVQVAALCNQSQNYLASGRPPGRYGNAHANIVPYQVFRAS 240
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
+ I G+D Q+ +C + L L DPR+
Sbjct: 241 DRDFIIACGNDAQFVSLCDAIGLPDLPKDPRF 272
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L L DPR+ + RV +R+ + + A + T +EW+ P +N
Sbjct: 257 LCDAIGLPDLPKDPRFTRNSDRVIHRDEIIGILAAHFLTGTADEWIGRIHPRGVPVGAIN 316
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I++ + ++ ++ +I H D VG S T E + P LGEHTD +L+
Sbjct: 317 DIARTLDEPQVKARNMLVQIPHPLNKDFVTVGSPFKLSGTPVEYKRAAPMLGEHTDTLLQ 376
Query: 121 DLLNYDETTIAKLKEKKIL 139
L D+ + LK + I+
Sbjct: 377 QLAKLDDDRLNDLKSRGII 395
>gi|33597298|ref|NP_884941.1| hypothetical protein BPP2729 [Bordetella parapertussis 12822]
gi|33573725|emb|CAE38022.1| conserved hypothetical protein [Bordetella parapertussis]
Length = 399
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 127/286 (44%), Positives = 184/286 (64%), Gaps = 8/286 (2%)
Query: 215 LPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE----L 270
+P+ +R+LDL+R++AGP+CT +LAD GA+VIK+E+P GD+ R WGPPF + + +
Sbjct: 1 MPMDGIRVLDLSRVLAGPWCTQMLADFGADVIKIERPGQGDDSRAWGPPFYESADGHERV 60
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
S YF NR K+SVC+D ++ +Q +++LA + DVLVENF G L R L Y LS +N
Sbjct: 61 SAYFCAANRGKRSVCLDLESEADRQALRELALRSDVLVENFKAGSLARHGLDYATLSALN 120
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLAT 386
+L+YCS+TG+G GPY RPGYD I ++GG++ +TG PD G P K GI IDL T
Sbjct: 121 PRLVYCSITGYGQTGPYAARPGYDSIIQAVGGMMSVTGLPDDAAGGGPQKTGIPIIDLMT 180
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANV 446
G+YA V+ AL + G+GQ +D +L+ QVS L + AN+L G +R G H V
Sbjct: 181 GVYACCGVLMALREREARGQGQHLDLSLMDVQVSALSTLAANFLACGQAPQRNGNEHPTV 240
Query: 447 VPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
VP + +G + + G+D+Q+Q +C+ ++ + LA DPRY T L
Sbjct: 241 VPGDAVQCLDGPLMLMVGNDRQFQRLCRHLDRESLARDPRYATNEL 286
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 61/122 (50%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ ++ + LA DPRY T LRV+ + L ++ +T + WL P +
Sbjct: 266 LCRHLDRESLARDPRYATNELRVQGKNALMAQLREAFRGQTRQYWLERLLAEGIPCGPIQ 325
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++++V AD H++ LV +G+I+ +G A+ S T P LGEHT+ VL
Sbjct: 326 TVAEVLADPHVRHRALVAAAPDPVFGEIRAMGSALRMSRTPARHGRAPTVLGEHTEAVLS 385
Query: 121 DL 122
L
Sbjct: 386 SL 387
>gi|126741237|ref|ZP_01756916.1| CAIB/BAIF family protein [Roseobacter sp. SK209-2-6]
gi|126717642|gb|EBA14365.1| CAIB/BAIF family protein [Roseobacter sp. SK209-2-6]
Length = 409
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 124/279 (44%), Positives = 184/279 (65%), Gaps = 6/279 (2%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTG-DECRKWGPPFL-----NNTEL 270
L V++LDL+RI+AGP CT LL DLGA V+KVE P TG D+ R+WGPP++ ++L
Sbjct: 22 LKGVKVLDLSRILAGPTCTQLLGDLGASVLKVENPRTGGDDTRQWGPPYVVDDMGQESDL 81
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
S YF NRNK+S+ +D + EGQQI++ LA D+L+ENF PG L + L Y L +
Sbjct: 82 SAYFMAANRNKRSLALDIASQEGQQIVRRLAATADILIENFKPGGLAKYGLDYASLKQEF 141
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYA 390
LIYCS++G+G GP +PGYD++A GG++ +TG P G P K G+ D+ G+YA
Sbjct: 142 PNLIYCSISGYGQTGPNSSKPGYDLMAQGYGGIMSLTGEPQGQPVKAGVGIADVMCGMYA 201
Query: 391 HGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQ 450
++AAL H+ KTG+GQ+ID L+ Q++ LIN G YLN G +R G H +++P+
Sbjct: 202 CIGILAALHHREKTGEGQQIDLALVDAQIAWLINEGVAYLNTGKVPERRGNEHPSIMPYG 261
Query: 451 VFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+++TS+ +V + G+D Q++ + + + L+ LA DPR+ T
Sbjct: 262 LYETSDAHVILAVGNDSQFRRLMEFLRLEGLAEDPRFAT 300
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 1/119 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+ + + L+ LA DPR+ T R++NR L + T +E + + P V
Sbjct: 283 LMEFLRLEGLAEDPRFATNPARLQNRAALNDILIPAVRRHTMDEVIAEMEARKVPAGPVQ 342
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVL 119
+ +VFA + + + + G ++++G + +S T R PP G + +L
Sbjct: 343 DLERVFATDQVAARNMSINM-QSSAGPVRLLGNPLNFSRTPVTYRHAPPQCGASSQEIL 400
>gi|291333844|gb|ADD93526.1| L carnitine dehydratase/bile acid inducible protein F [uncultured
marine bacterium MedDCM-OCT-S04-C191]
Length = 310
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 123/268 (45%), Positives = 177/268 (66%), Gaps = 5/268 (1%)
Query: 225 LTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELSTYFTCVNR 279
++RI+AGP LL D+GA+VIK+E+P +GD+ R WGPP+L + T S Y+ C NR
Sbjct: 1 MSRILAGPSSAQLLGDMGADVIKIERPGSGDDTRSWGPPWLKDDKGKETWESAYYLCANR 60
Query: 280 NKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVT 339
NK+S+ +DF PEGQ+++K+LA + DVL+ENF G L + L Y+ L +LIYCSVT
Sbjct: 61 NKRSLTIDFTKPEGQKLLKELASRADVLIENFKVGGLQQYGLDYESLHAQLPELIYCSVT 120
Query: 340 GFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALL 399
GFG GPY PGYD + +GG++ ITG P+G P KVG+A +DL G+YA A++ A+
Sbjct: 121 GFGQTGPYAKNPGYDFMIQGMGGIMSITGEPEGEPMKVGVAIVDLMCGMYASVAILGAIR 180
Query: 400 HKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNGYV 459
H+ + G GQ ID LL T + LINVG NYL +G + R+G HAN+VP+Q + S+GY
Sbjct: 181 HRDQGGGGQHIDLALLDTHAAWLINVGMNYLTSGEDPLRYGNGHANIVPYQPYPASDGYF 240
Query: 460 TIGTGSDKQYQDMCKVMNLQHLALDPRY 487
+ G++ Q++ C + + +DPR+
Sbjct: 241 ILTIGNNVQFRKFCDFAEIPEIPVDPRF 268
>gi|239813138|ref|YP_002942048.1| L-carnitine dehydratase/bile acid-inducible protein F [Variovorax
paradoxus S110]
gi|239799715|gb|ACS16782.1| L-carnitine dehydratase/bile acid-inducible protein F [Variovorax
paradoxus S110]
Length = 413
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 125/285 (43%), Positives = 187/285 (65%), Gaps = 9/285 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L +++LDL+R++AGP+CT +LADLGA+V+K+E+P GD+ R WGPPF+ N+T+ +
Sbjct: 9 LDGIKVLDLSRVLAGPWCTQILADLGADVVKIERPGVGDDTRTWGPPFIKDADGNDTDQA 68
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+YFT NRNK+SV VD TP+GQ ++K +A Q D++VENF G L + L ++ L N
Sbjct: 69 SYFTACNRNKRSVTVDMATPDGQALLKQMAAQADIVVENFKTGGLKQYGLDHESLRAANP 128
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCSVTGFG GPY +R GYD++ ++ G++ ITG PDG P +VG+A DL TG
Sbjct: 129 RLIYCSVTGFGHDGPYAERAGYDLMIQAMTGMMSITGRPDGEPGGGPLRVGVALTDLFTG 188
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA A++AAL + +TG+GQ ID LL +++L N + +LN G +R G +H ++
Sbjct: 189 VYASTAILAALQVRGRTGEGQHIDMALLDVGMAILANQASAFLNTGKAPQRQGNTHPSLA 248
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
P+Q F T +G + + G++ Q+ C+ A D R+ T L
Sbjct: 249 PYQDFPTQDGSMLLAIGNNGQFARFCEAAGHAEWAADARFATNTL 293
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 3/125 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+ A D R+ T LRV++R +L +E T ++T +W+ + + + P +N
Sbjct: 273 FCEAAGHAEWAADARFATNTLRVKHRGVLIPMMEELTRTRSTADWVALLEDKAVPCGPIN 332
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDI-KIVGPAVAYSLTQ--PEVRTPPPALGEHTDY 117
I+Q F D ++ L + + I I G A LT P +R PPALG+HT
Sbjct: 333 DIAQAFDDAQVKSRGLAVTLPRDAGDGIASITGVASPLRLTATPPVLRHAPPALGQHTRE 392
Query: 118 VLKDL 122
VL +
Sbjct: 393 VLAEF 397
>gi|398809624|ref|ZP_10568469.1| putative acyl-CoA transferase/carnitine dehydratase [Variovorax sp.
CF313]
gi|398085347|gb|EJL76006.1| putative acyl-CoA transferase/carnitine dehydratase [Variovorax sp.
CF313]
Length = 414
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 124/294 (42%), Positives = 190/294 (64%), Gaps = 9/294 (3%)
Query: 208 LSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-- 265
++ P+ L +++LDL+R++AGP+CT +LADLGA+V+K+E+P GD+ R WGPPF+
Sbjct: 1 MTMNKPAAALDGIKVLDLSRVLAGPWCTQILADLGADVVKIERPGVGDDTRTWGPPFIKD 60
Query: 266 ---NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLG 322
N+T+ ++YFT NRNK+SV +D TP+GQ +++ +A Q D++VENF G L + L
Sbjct: 61 ADGNDTDQASYFTSCNRNKRSVTIDMATPDGQALLRQMAAQADIVVENFKTGGLKQYGLD 120
Query: 323 YKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVG 378
++ L N +LIYCSVTGFG GPY +R GYD++ ++ G++ ITG PD G P +VG
Sbjct: 121 HESLRAANPRLIYCSVTGFGHDGPYAERAGYDLMIQAMTGMMSITGRPDDVPGGGPLRVG 180
Query: 379 IASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKR 438
+A DL TG+YA A++AAL + +TG+GQ ID LL +++L N + +LN G R
Sbjct: 181 VALTDLFTGVYASTAILAALQVRDRTGEGQHIDMALLDVGMAILANQASAFLNTGKAPGR 240
Query: 439 WGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
G +H ++ P+Q F T +G + + G++ Q+ C+ A D R+ T L
Sbjct: 241 QGNTHPSLAPYQDFPTQDGSMLLAIGNNGQFARFCEAAGHAEWASDARFATNTL 294
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 3/125 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+ A D R+ T LRV++R +L +E T +TT W+ + + + P +N
Sbjct: 274 FCEAAGHAEWASDARFATNTLRVKHRLVLIPMMEELTRTRTTAAWVALLEDKAVPCGPIN 333
Query: 61 SISQVFADEHIQDIKL---VKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDY 117
I+Q F D +Q L + + + I V + S T P +R PPALG+HT
Sbjct: 334 DIAQAFDDAQVQARGLKVTLPRDAGDGIASISGVASPLRLSATPPVLRHAPPALGQHTQE 393
Query: 118 VLKDL 122
VL ++
Sbjct: 394 VLAEM 398
>gi|254475830|ref|ZP_05089216.1| L-carnitine dehydratase/bile acid-inducible protein F [Ruegeria sp.
R11]
gi|214030073|gb|EEB70908.1| L-carnitine dehydratase/bile acid-inducible protein F [Ruegeria sp.
R11]
Length = 370
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 129/287 (44%), Positives = 180/287 (62%), Gaps = 3/287 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL--NNTELSTY 273
PL+ +++++L RI+AGP+ LADLGAEVIKVE P GD+ R+WGPPF+ + + + Y
Sbjct: 3 PLAGLKVVELARILAGPWIGQSLADLGAEVIKVESP-EGDDTRRWGPPFIERDGDKTAAY 61
Query: 274 FTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQL 333
+ NR K V DF+T EG+Q + DL + D+L+ENF G L + L Y L EIN +L
Sbjct: 62 YYAANRGKTCVTADFRTEEGKQTVLDLIRGADILIENFKVGGLAKYGLDYDSLKEINPRL 121
Query: 334 IYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGA 393
IYCSVTGFG GPY R GYD + + GL+ ITG PDG P KVG+A D+ TGLY
Sbjct: 122 IYCSVTGFGQDGPYAARAGYDFLLQGMSGLMSITGAPDGEPQKVGVAITDIVTGLYGTIG 181
Query: 394 VMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFK 453
++AA+ ++ TG+GQ ID +LL ++L N NYL G R G H N+ P+QV
Sbjct: 182 ILAAVEQRHTTGRGQHIDMSLLDCATAVLANQNMNYLATGTSPTRMGNEHPNIAPYQVMA 241
Query: 454 TSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHL 500
+G+V + G+D Q+ +C+V+N+ LA DPR+ + L +A L
Sbjct: 242 VRDGHVILAVGNDGQFARLCEVLNMAGLAADPRFASNQLRVANRGDL 288
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+V+N+ LA DPR+ + LRV NR L + A + + L + + P +N
Sbjct: 260 LCEVLNMAGLAADPRFASNQLRVANRGDLTPMLAAALAQWGQADLLAALEAATVPAGPIN 319
Query: 61 SISQVFADEHIQ 72
+I Q F D IQ
Sbjct: 320 TIGQAFDDPQIQ 331
>gi|418528059|ref|ZP_13094009.1| formyl-CoA transferase [Comamonas testosteroni ATCC 11996]
gi|371454435|gb|EHN67437.1| formyl-CoA transferase [Comamonas testosteroni ATCC 11996]
Length = 427
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 131/284 (46%), Positives = 184/284 (64%), Gaps = 10/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
LS++R+LDL+R++AGP+CT LAD+GA+VIK+E+P GD+ R WGPPF + + +
Sbjct: 17 LSHLRVLDLSRVLAGPWCTQNLADMGADVIKIEKPGEGDDTRHWGPPFFGDALGDASAHA 76
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NRNK+SV VD TPEGQ II++LAK D++VENF G L R L Y L+ +N
Sbjct: 77 CYFAACNRNKRSVTVDMATPEGQAIIRELAKDSDIVVENFKTGGLQRYGLDYASLAALNP 136
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+LIYCSVTGFG GPY R GYD++ ++ GL+ ITG P P +VG+A IDL TG
Sbjct: 137 RLIYCSVTGFGHTGPYAPRAGYDLLIQAMSGLMSITGRADSEPGSGPLRVGVAVIDLFTG 196
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA A+++AL ++ TG+GQ ID LL +++L N G +LN G R G +H +VV
Sbjct: 197 MYATSAILSALEARHHTGRGQHIDMALLDVAMAVLANQGTGFLNTGSIPGRQGNTHPSVV 256
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P+Q F T++G + + G+D Q+ C+ + D R+ T A
Sbjct: 257 PYQDFPTADGNMLLAIGNDGQFARFCEAAGVA-WHQDARFTTNA 299
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 13/138 (9%)
Query: 13 DPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEHIQ 72
D R+ T A RV +R + + T+ ++T +W+ + + + P +N+I Q F D +Q
Sbjct: 292 DARFTTNAGRVIHRVEMVTMMSELTVSRSTADWIALLEARAVPCGPINNIHQAFEDPQVQ 351
Query: 73 DIKLVKEISHEKYGD-----------IKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
L I+ ++Y D + + S T +R PPALG+HT+ VL++
Sbjct: 352 ARGL--RITQQRYPDGQLPQGECINQVVTTASPLRLSDTPATLRYAPPALGQHTEEVLRE 409
Query: 122 LLNYDETTIAKLKEKKIL 139
L D + L+EK++
Sbjct: 410 RLQLDAAQLQALREKQVF 427
>gi|260432302|ref|ZP_05786273.1| L-carnitine dehydratase/bile acid-inducible protein F [Silicibacter
lacuscaerulensis ITI-1157]
gi|260416130|gb|EEX09389.1| L-carnitine dehydratase/bile acid-inducible protein F [Silicibacter
lacuscaerulensis ITI-1157]
Length = 370
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 125/275 (45%), Positives = 177/275 (64%), Gaps = 3/275 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE--LSTY 273
PL+ +++++L RI+AGP+ ADLGA+VIKVE P GD+ R WGPPF+ + + Y
Sbjct: 4 PLAGLKVVELARILAGPWAGQTFADLGAKVIKVESP-AGDDTRAWGPPFVTRDQDVSAAY 62
Query: 274 FTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQL 333
+ NR K SV DF TPEGQ+ ++ L DV++ENF G L + L Y LS++N L
Sbjct: 63 YHSTNRGKVSVIADFSTPEGQEKVRALVADADVVIENFKVGGLKKYGLDYDGLSQLNPGL 122
Query: 334 IYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGA 393
+YCS+TGFG GPY R GYD I + GL+ +TG PDG P K G+A D+ TG+YA
Sbjct: 123 VYCSITGFGQTGPYAHRAGYDFIIQGMSGLMSVTGEPDGQPQKAGVAITDVFTGIYAVAG 182
Query: 394 VMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFK 453
V+AAL + +TG+GQ +D LL V++ N NYL G +R G +H N+ P+QVF
Sbjct: 183 VLAALHQRQRTGRGQHVDMALLDVAVAVTANQALNYLTTGQVPQRMGNAHVNLAPYQVFD 242
Query: 454 TSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYL 488
++G++ I TG+D+QY+ +C+V+NL +A P YL
Sbjct: 243 CADGHIIIATGNDRQYRRLCQVLNLPDMAEAPEYL 277
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+V+NL +A P YL R+ NR L + T + L + P +N
Sbjct: 261 LCQVLNLPDMAEAPEYLHNKDRLANRRTLIARLNGATATWAKADLLAACEAQGIPAGPIN 320
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGE 113
++ +V AD + + + + + G I P V +S + P P LGE
Sbjct: 321 TLDEVMADPQV----IARGMQIDLDGVPGIRAPFV-FSDADLNLSRPAPKLGE 368
>gi|228996564|ref|ZP_04156203.1| L-carnitine dehydratase/bile acid-inducible protein F [Bacillus
mycoides Rock3-17]
gi|228763196|gb|EEM12104.1| L-carnitine dehydratase/bile acid-inducible protein F [Bacillus
mycoides Rock3-17]
Length = 395
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 127/285 (44%), Positives = 184/285 (64%), Gaps = 2/285 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L + I+DL+R++AGPFCTM+L DLGAEVIKVE GD+ R WGPPF+ S YF C
Sbjct: 5 LQGITIIDLSRVLAGPFCTMILGDLGAEVIKVENIGNGDDTRGWGPPFVEGE--SAYFLC 62
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
NRNK+S+ ++ K+ G+ I+K L D++V+NF PG L+R+ LGY L E+ +I
Sbjct: 63 ANRNKESLTLNLKSEMGKDILKKLVSHADIVVQNFKPGTLERMGLGYDVLQEVKGDIILA 122
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S++GFG KGP PGYD + ++ GL+ ITG D P KVG+A D+ TGL+ ++A
Sbjct: 123 SISGFGQKGPASHLPGYDYMIQAMSGLMSITGGKDEEPAKVGVAISDVLTGLFTCIGILA 182
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
AL H+ +TG+GQ+ID +LL +Q++ L+NV +NYL G +R G H N+VP+QVF+ +
Sbjct: 183 ALQHRNRTGEGQEIDISLLDSQLAALVNVASNYLCTGELPERLGNQHPNIVPYQVFEAED 242
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
G + + G+D+Q+ C ++ Q L+ RY T A L L+
Sbjct: 243 GDLVVAVGNDEQFHKFCLLLGRQELSSLERYKTNASRLQHKDELV 287
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 64/137 (46%), Gaps = 1/137 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C ++ Q L+ RY T A R+++++ L I + +K EEW + P +
Sbjct: 258 FCLLLGRQELSSLERYKTNASRLQHKDELVNMIAIEMKKKKKEEWKQLLDEAGIPNGPIL 317
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ + E + + H ++K+VG + S T +++ PP GEHT+ +L+
Sbjct: 318 NVKEALETEQAVARDMTVHMKHPTIENLKLVGSPLKLSRTPVQMQKYPPLHGEHTEKILR 377
Query: 121 DLLNYDETTIAKLKEKK 137
L Y + I ++ + +
Sbjct: 378 K-LGYSQEIITRMTKNQ 393
>gi|265984968|ref|ZP_06097703.1| L-carnitine dehydrogenase [Brucella sp. 83/13]
gi|264663560|gb|EEZ33821.1| L-carnitine dehydrogenase [Brucella sp. 83/13]
Length = 402
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 131/272 (48%), Positives = 175/272 (64%), Gaps = 9/272 (3%)
Query: 225 LTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELSTYFTCVNR 279
++R++AGP+C +LADLGAEVIK+E+P TGD+ R WGPP++ N T ++Y+ NR
Sbjct: 1 MSRVLAGPWCGQILADLGAEVIKIERPRTGDDTRDWGPPWMKDEQGNPTREASYYQSANR 60
Query: 280 NKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVT 339
K SV ++ +PEGQ +++ + +CDVL+EN+ G L + L Y LS IN L+YCSVT
Sbjct: 61 GKFSVALNIASPEGQDLLRKMVAECDVLIENYKAGSLAKYGLDYATLSAINPGLVYCSVT 120
Query: 340 GFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATGLYAHGAVM 395
GFG GP PGYD I IGGL+ ITG P G P KVG+A DL TGLY+ A+
Sbjct: 121 GFGQTGPRAPEPGYDFIIQGIGGLMSITGERDDKPGGGPQKVGVAVADLMTGLYSAIAIE 180
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
AALL + KTGKGQ ID LL QV+ L N NYL +G R+G +HAN+VP+QVF+ S
Sbjct: 181 AALLSRAKTGKGQHIDMALLDVQVAALCNQSQNYLASGRPPGRYGNAHANIVPYQVFRAS 240
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
+ I G+D Q+ +C + L L DPR+
Sbjct: 241 DRDFIIACGNDAQFVSLCDAIGLPDLPKDPRF 272
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L L DPR+ + RV +R+ + + A + T +EW+ P +N
Sbjct: 257 LCDAIGLPDLPKDPRFTRNSDRVIHRDEIIGILAAHFLTGTADEWIGRIHPRGVPVGAIN 316
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I++ + ++ ++ +I H D VG + S T E + P LGEHTD +L+
Sbjct: 317 DIARALDEPQVKARNMLVQIPHPLNKDFVTVGSPIKLSGTPVEYKRAAPMLGEHTDTLLQ 376
Query: 121 DLLNYDETTIAKLKEKKIL 139
L D+ + LK + I+
Sbjct: 377 QLAKLDDDRLNDLKSRGII 395
>gi|299533794|ref|ZP_07047165.1| L-carnitine dehydratase/bile acid-inducible protein F [Comamonas
testosteroni S44]
gi|298718210|gb|EFI59196.1| L-carnitine dehydratase/bile acid-inducible protein F [Comamonas
testosteroni S44]
Length = 438
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 131/284 (46%), Positives = 184/284 (64%), Gaps = 10/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE-----LS 271
LS++R+LDL+R++AGP+CT LAD+GA+VIK+E+P GD+ R WGPPF + + +
Sbjct: 28 LSHLRVLDLSRVLAGPWCTQNLADMGADVIKIEKPGEGDDTRHWGPPFFADAQGDASAHA 87
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NRNK+SV VD TPEGQ II++LAK D++VENF G L R L Y L+ +N
Sbjct: 88 CYFAACNRNKRSVTVDMATPEGQAIIRELAKDSDIVVENFKTGGLQRYGLDYASLAALNP 147
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+LIYCSVTGFG GPY R GYD++ ++ GL+ ITG P P +VG+A IDL TG
Sbjct: 148 RLIYCSVTGFGHTGPYAPRAGYDLLIQAMSGLMSITGRADSEPGSGPLRVGVAVIDLFTG 207
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA A+++AL ++ TG+GQ ID LL +++L N G +LN G R G +H +VV
Sbjct: 208 MYATSAILSALEARHHTGRGQHIDMALLDVAMAVLANQGTGFLNTGSIPGRQGNTHPSVV 267
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P+Q F T++G + + G+D Q+ C+ + D R+ T A
Sbjct: 268 PYQDFPTADGNMLLAIGNDGQFARFCEAAGVA-WHQDARFTTNA 310
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 13/138 (9%)
Query: 13 DPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEHIQ 72
D R+ T A RV +R + + T ++T +W+ + + + P +N+I Q F D H+Q
Sbjct: 303 DARFTTNAGRVIHRVQVVDMMSELTRSRSTADWIALLEARAVPCGPINNIRQAFEDPHVQ 362
Query: 73 DIKLVKEISHEKYGD-----------IKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
L I+ ++Y D + + S T +R PPALG+HT+ VL++
Sbjct: 363 ARGL--RITQQRYPDGQLPEGECINQVTTTASPLRLSDTPATLRYAPPALGQHTEEVLRE 420
Query: 122 LLNYDETTIAKLKEKKIL 139
L D + L++K++L
Sbjct: 421 RLQLDAAQLQALRDKQVL 438
>gi|424918875|ref|ZP_18342239.1| putative acyl-CoA transferase/carnitine dehydratase [Rhizobium
leguminosarum bv. trifolii WSM597]
gi|392855051|gb|EJB07572.1| putative acyl-CoA transferase/carnitine dehydratase [Rhizobium
leguminosarum bv. trifolii WSM597]
Length = 399
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 119/278 (42%), Positives = 178/278 (64%), Gaps = 4/278 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE----LS 271
PL+ +R+++L R++AGP+ +LADLGA+VIKVE P GD+ R+WGPPF+ + +
Sbjct: 9 PLAGIRVIELARVLAGPWAGQMLADLGADVIKVENPDGGDDTRQWGPPFVEGADGENLSA 68
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NR K+SV D K+PEGQ +++ L DV++ENF G L + L Y L ++N
Sbjct: 69 AYYHAANRGKRSVTADLKSPEGQDLVRRLVASADVVIENFKLGGLVKYGLDYDSLRKVNP 128
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+L+YCS+TGFG GPY GYD I + G + ITG PDG P K G+A D+ TG+YA
Sbjct: 129 KLVYCSITGFGQTGPYASLAGYDYIVQGMSGFMSITGEPDGQPMKAGVAIADIFTGIYAV 188
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A+ AAL+H K+G+GQ +D LL Q ++L N NYL +G R G +H N+ P++V
Sbjct: 189 SAIEAALIHALKSGEGQLVDMALLDVQSAVLANQNMNYLISGAAPTRLGNAHPNISPYEV 248
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
++GY+ + G+D Q++ +C ++ L+ +A D R+ T
Sbjct: 249 VPAADGYLILAVGNDGQFRRLCAILGLETIAGDERFAT 286
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 59/122 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ L+ +A D R+ T RV NR L + + +T++ + L + P +N
Sbjct: 269 LCAILGLETIAGDERFATNKARVANRGELRRLVSTETLKWQKADLLKACEENGVPAGPIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I ++FAD ++ L +++ I V V S T P P LGEHT+ +L
Sbjct: 329 TIEEMFADPQVEARGLRIDLADAAGTVIPGVRTPVVLSETPLSYSRPSPRLGEHTEEILA 388
Query: 121 DL 122
+L
Sbjct: 389 EL 390
>gi|229004214|ref|ZP_04162015.1| L-carnitine dehydratase/bile acid-inducible protein F [Bacillus
mycoides Rock1-4]
gi|228757075|gb|EEM06319.1| L-carnitine dehydratase/bile acid-inducible protein F [Bacillus
mycoides Rock1-4]
Length = 395
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 126/285 (44%), Positives = 184/285 (64%), Gaps = 2/285 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L + I+DL+R++AGPFCTM+L DLGAEVIKVE GD+ R WGPPF+ S YF C
Sbjct: 5 LQGITIIDLSRVLAGPFCTMILGDLGAEVIKVENIGNGDDTRGWGPPFVEGE--SAYFLC 62
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
NRNK+S+ ++ K+ G+ I+K L D++V+NF PG L+R+ LGY L E+ +I
Sbjct: 63 ANRNKESLTLNLKSEMGKDILKKLVSHADIVVQNFKPGTLERMGLGYDVLQEVKGDIILA 122
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S++GFG KGP PGYD + ++ GL+ ITG D P KVG+A D+ TGL+ ++A
Sbjct: 123 SISGFGQKGPASHLPGYDYMIQAMSGLMSITGGKDEEPAKVGVAISDVLTGLFTCIGILA 182
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
AL H+ +TG+GQ+ID +L +Q++ L+NV +NYL G +R G H+N+VP+QVF+ +
Sbjct: 183 ALQHRNRTGEGQEIDISLFDSQLAALVNVASNYLCTGELPERLGNQHSNIVPYQVFEAED 242
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
G + + G+D+Q+ C ++ Q L+ RY T A L L+
Sbjct: 243 GDLVVAVGNDEQFHKFCLLLGRQELSSLERYKTNASRLQHKDELV 287
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 64/137 (46%), Gaps = 1/137 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C ++ Q L+ RY T A R+++++ L I + +K EEW + P +
Sbjct: 258 FCLLLGRQELSSLERYKTNASRLQHKDELVNMIAIEMKKKKKEEWKQLLDEAGIPNGPIL 317
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ + E + + H ++K+VG + S T +++ PP GEHT+ +L+
Sbjct: 318 NVKEALETEQAVARDMTVHMKHPTIENLKLVGSPLKLSRTPVQMQKYPPLHGEHTEKILR 377
Query: 121 DLLNYDETTIAKLKEKK 137
L Y + I ++ + +
Sbjct: 378 K-LGYSQEIITRMTKNQ 393
>gi|374329198|ref|YP_005079382.1| acyl-CoA transferase/carnitine dehydratase [Pseudovibrio sp.
FO-BEG1]
gi|359341986|gb|AEV35360.1| acyl-CoA transferase/carnitine dehydratase [Pseudovibrio sp.
FO-BEG1]
Length = 405
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 131/288 (45%), Positives = 184/288 (63%), Gaps = 8/288 (2%)
Query: 222 ILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELSTYFTC 276
+LDL+RI+AGP CT LL D+GAE+IK+E P GD+ RKWGPPFL +T S Y+
Sbjct: 2 VLDLSRILAGPTCTQLLGDMGAEIIKIEHPTRGDDTRKWGPPFLKGKGGTDTGESAYYLS 61
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
NRNK S+ +D ++ EG +++K+LA D+++ENF G L R LGY L N +LIYC
Sbjct: 62 SNRNKHSLGIDMRSEEGVEMLKELAATADMVIENFKVGDLARKGLGYDDLRAKNDRLIYC 121
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD---GPPCKVGIASIDLATGLYAHGA 393
S+TGFG GPY R GYD + ++GG++ ITG P+ G P K+G+ D+ G+YA A
Sbjct: 122 SITGFGQTGPYSHRAGYDALIQAMGGIMSITGLPEEEGGSPTKIGVGIADVMCGMYACNA 181
Query: 394 VMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFK 453
++AAL H+ K+G+GQ ID +LL QV+ LIN G +YL G KR G +H +VP++ F
Sbjct: 182 ILAALHHREKSGEGQHIDISLLDCQVAWLINQGLSYLTDGNIPKRLGNAHPTIVPYETFP 241
Query: 454 TSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
S+ + G+D QYQ C+V+ L+ DPR+ T A + S L+
Sbjct: 242 ASDKDFMVAVGNDAQYQRFCEVLGCPELSTDPRFATNADRVRNRSELV 289
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 2/143 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V+ L+ DPR+ T A RV NR L + T+++ + W +GV P VN
Sbjct: 260 FCEVLGCPELSTDPRFATNADRVRNRSELVPLLRQFTIKQGAQHWTDELEGVGVPCGPVN 319
Query: 61 SISQVFADEHIQDIKLVKEISHEKY--GDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
++ VF+D I + + H++ G + ++G + YS T R PP LGE + V
Sbjct: 320 DLAGVFSDPQILHRGMKISVPHKQSEDGQVNLIGNPINYSKTPVTYRKAPPTLGEDSIEV 379
Query: 119 LKDLLNYDETTIAKLKEKKILGL 141
L L + I L + ++ L
Sbjct: 380 LTKYLQKTKEEINDLAARGVVSL 402
>gi|339327837|ref|YP_004687529.1| CoA-transferase family III family protein 22 [Cupriavidus necator
N-1]
gi|338170438|gb|AEI81491.1| CoA-transferase family III family protein 22 [Cupriavidus necator
N-1]
Length = 398
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 126/282 (44%), Positives = 183/282 (64%), Gaps = 5/282 (1%)
Query: 213 PSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN----- 267
P++ L+ V+ILDL+RI+AGP T LL DLGA+V+KVE+P GD+ RKWGPP++ +
Sbjct: 6 PNMALAGVKILDLSRILAGPSSTQLLGDLGADVVKVERPDAGDDTRKWGPPYVADKDGEL 65
Query: 268 TELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLS 327
T S Y+ NRNK+S+ +D + +G+ +I +L DVLVEN+ G L + L Y+ +
Sbjct: 66 TNESAYYLSANRNKRSIAIDLASEDGRDLIFELLDHADVLVENYKVGGLAQYGLSYEQIK 125
Query: 328 EINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATG 387
+ +LIYCS+TGFG GPY +RPGYD + +GG++ +TG P+G P KVG+ D+ TG
Sbjct: 126 DRYPRLIYCSITGFGQTGPYAERPGYDFLIQGMGGIMSLTGEPEGQPMKVGVGIADVMTG 185
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA V+AAL H+ + G GQ ID +LL Q++ L+N NYL G R G H N+V
Sbjct: 186 MYAAVGVLAALHHRDRLGVGQHIDISLLDAQIAWLVNGATNYLADGKLPTRLGNGHPNIV 245
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+QVF T++ + + G+D Q+ CKV +L HL D ++ T
Sbjct: 246 PYQVFGTADAPMILAVGNDSQFVRFCKVADLLHLTTDLKFST 287
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 67/126 (53%), Gaps = 2/126 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
CKV +L HL D ++ T RV +R+ +C+ IE ++ EWL +GV P VN
Sbjct: 270 FCKVADLLHLTTDLKFSTNPARVAHRQEVCELIEGALRKRKRIEWLSELEGVGVPCGPVN 329
Query: 61 SISQVFADEHIQDIKLVKEI--SHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
++ VF+D H++ E+ + G ++++ + +S T R PPP L EH + V
Sbjct: 330 NLEDVFSDPHVKARGARIEVPCDWARDGHVRLLANPLKFSKTPASYRRPPPRLDEHREDV 389
Query: 119 LKDLLN 124
LKD L+
Sbjct: 390 LKDWLS 395
>gi|355353803|gb|AER61713.1| CoA-transferase family III [Variovorax paradoxus B4]
Length = 412
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 125/285 (43%), Positives = 187/285 (65%), Gaps = 9/285 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L +++LDL+R++AGP+CT +LADLGA+V+K+E+P GD+ R WGPPF+ N+T+ +
Sbjct: 8 LDGIKVLDLSRVLAGPWCTQILADLGADVVKIERPGVGDDTRTWGPPFIRDANGNDTDQA 67
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+YFT NRNK+SV VD TPEGQ ++K +A Q D++VENF G L + L ++ L N
Sbjct: 68 SYFTACNRNKRSVTVDMATPEGQALLKQMAAQADIVVENFKTGGLKQYGLDHESLRAANP 127
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+L+YCSVTGFG GPY +R GYD++ ++ G++ ITG PDG P +VG+A DL TG
Sbjct: 128 RLVYCSVTGFGHDGPYAERAGYDLMIQAMTGMMSITGRPDGEPGGGPLRVGVALTDLFTG 187
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA A++AAL + +TG+GQ ID LL +++L N + +LN G +R G +H ++
Sbjct: 188 VYASTAILAALQVRDRTGEGQHIDMALLDVGMAILANQASAFLNTGKAPQRQGNTHPSLA 247
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
P+Q F T +G + + G++ Q+ C+ A D R+ T L
Sbjct: 248 PYQDFPTLDGSMLLAIGNNGQFARFCEAAGHAEWAADARFATNTL 292
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 62/125 (49%), Gaps = 3/125 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+ A D R+ T LRV++R +L +EA T +TT +W+ + + + P +N
Sbjct: 272 FCEAAGHAEWAADARFATNTLRVKHRGVLIPMMEALTRTRTTTDWVTLLEDKAVPCGPIN 331
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIK-IVGPAVAYSLTQ--PEVRTPPPALGEHTDY 117
I+Q F D ++ L + + I+ I G A LT P +R PPALG+HT
Sbjct: 332 DIAQAFDDAQVKSRGLAVTLPRDAGDGIESITGVASPLRLTATPPVLRHAPPALGQHTRE 391
Query: 118 VLKDL 122
VL +
Sbjct: 392 VLAEF 396
>gi|334320767|ref|YP_004557396.1| formyl-CoA transferase [Sinorhizobium meliloti AK83]
gi|407723431|ref|YP_006843092.1| CaiB/baiF CoA-transferase family protein DDB_G0269880
[Sinorhizobium meliloti Rm41]
gi|334098506|gb|AEG56516.1| Formyl-CoA transferase [Sinorhizobium meliloti AK83]
gi|407323491|emb|CCM72092.1| CaiB/baiF CoA-transferase family protein DDB_G0269880
[Sinorhizobium meliloti Rm41]
Length = 394
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 130/280 (46%), Positives = 180/280 (64%), Gaps = 5/280 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL----S 271
PL +R+L+L RI+AGP+ LADLGA+VIKVE P GD+ R WGPPF+ + +
Sbjct: 4 PLKGIRVLELARILAGPWIGQTLADLGADVIKVESPA-GDDTRTWGPPFVTGEDDERLDA 62
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NR K+SV +DF T EGQ+ ++ LA + DVL+ENF G L + L Y+ LS++N
Sbjct: 63 AYFHACNRGKRSVVLDFTTAEGQEAVRRLAAKSDVLLENFKVGGLAKYGLDYESLSKVNP 122
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+LIYCSVTGFG GPY R GYD I + G++ +TG PD P K+G+A D+ TGLY
Sbjct: 123 RLIYCSVTGFGQDGPYAHRAGYDYIVQGMSGIMDLTGEPDREPQKIGVAFADIFTGLYGV 182
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
AV AAL + +TG+GQ+ID LL +L N N+L +G +R G +H N+ P+QV
Sbjct: 183 IAVQAALAQRERTGEGQQIDMALLDCMTGVLANQALNFLVSGKAPRRLGNAHPNIAPYQV 242
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
F TS+G++ + G+D+Q+ C+++ LA D RY T A
Sbjct: 243 FPTSDGHLIVAVGNDRQFVKFCELLGRPDLAADARYRTNA 282
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 24/135 (17%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+++ LA D RY T A RV++R+ L E+ A+T + E L + P +N
Sbjct: 263 FCELLGRPDLAADARYRTNADRVQHRDSLTPELAAETAKYERETLLEKLEASGVPGGPIN 322
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTP------------- 107
+++ VFAD I ++ + H A + T P VRTP
Sbjct: 323 TVADVFADPQIVHRQMRVDTPHTG-----------AAAGTSPGVRTPIRFSGATLALDRG 371
Query: 108 PPALGEHTDYVLKDL 122
P LGEHT VL ++
Sbjct: 372 VPRLGEHTAEVLAEI 386
>gi|126730848|ref|ZP_01746657.1| Putative acyl-CoA transferase/carnitine dehydratase [Sagittula
stellata E-37]
gi|126708564|gb|EBA07621.1| Putative acyl-CoA transferase/carnitine dehydratase [Sagittula
stellata E-37]
Length = 374
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 125/293 (42%), Positives = 185/293 (63%), Gaps = 3/293 (1%)
Query: 210 SENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN--N 267
+ P PL +++++L RI+AGPF LAD+GA+VIKVE V GD+ R+WGPPF++ +
Sbjct: 2 TSAPRGPLEGLKVVELARILAGPFAGQTLADMGADVIKVEA-VAGDDTRRWGPPFIDRED 60
Query: 268 TELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLS 327
+ YF NR K SV VD T EGQ ++DL D+L+ENF G L + L Y L+
Sbjct: 61 DRSAAYFHSCNRGKTSVAVDLTTEEGQARVRDLVADADILIENFKVGGLAKYGLDYPSLA 120
Query: 328 EINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATG 387
++N +L+YCS+TGFG GPY R GYD I + G + ITG PDG P + G+A DL TG
Sbjct: 121 KLNPRLVYCSITGFGQDGPYAHRAGYDYIIQGMSGFMSITGAPDGEPQRAGVAITDLFTG 180
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AA+ + +TG+GQ ID LL V+ + N NYL+ G +R G H N+
Sbjct: 181 LYSVSAILAAIHQRDRTGRGQHIDMALLDCAVATMANQALNYLSTGTPPERTGNYHPNLT 240
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHL 500
P+QVF+ S+G++ I TG+D Q++ + +V+ ++ + P Y++ A +A + L
Sbjct: 241 PYQVFECSDGHIIIATGNDAQFRRLTRVLGMEDIGTQPEYISNAARIAHRAQL 293
>gi|330824457|ref|YP_004387760.1| formyl-CoA transferase [Alicycliphilus denitrificans K601]
gi|329309829|gb|AEB84244.1| Formyl-CoA transferase [Alicycliphilus denitrificans K601]
Length = 421
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 131/294 (44%), Positives = 184/294 (62%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL-----S 271
L+ +R+LDLTRI+AGP+ T LADLGAEVIK+E P GD+ R+ GPPF+ + +
Sbjct: 15 LAGLRVLDLTRILAGPWATQNLADLGAEVIKIEHPNGGDDTRQMGPPFVRDQHSGEPVDA 74
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NR K+SV +D TPEGQ++++ LA +CD+LVENF G L R L Y L
Sbjct: 75 AYFLAANRGKQSVAIDIATPEGQKLVRALAARCDILVENFKVGGLARYGLDYATLHAELP 134
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATG 387
+L+YCS+TGFG GPYK R GYD + +GGL+ +TG PD G P + G+A D+ +G
Sbjct: 135 RLVYCSITGFGQTGPYKQRAGYDYLIQGMGGLMSVTGEPDDKPGGGPQRAGVALADVMSG 194
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA ++AA+ H+ TG GQ +D +L QV++L+N NYL G R G H N+V
Sbjct: 195 MYAALGILAAMRHRDLTGIGQHLDIGMLDVQVAVLVNQSMNYLTTGKAPTRMGNGHPNIV 254
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F S+G + G+D Q++ +V+ L+ A DPR+ T AL +A L+
Sbjct: 255 PYQYFPASDGQFILAVGNDAQFRRAMQVLGLEAEAADPRFTTIALRVANRDALL 308
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%)
Query: 3 KVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSI 62
+V+ L+ A DPR+ T ALRV NR+ L + +T +T +EW+ + V P +N+I
Sbjct: 281 QVLGLEAEAADPRFTTIALRVANRDALLPLMAERTRTRTVDEWVAAMESVDVPCGPINTI 340
Query: 63 SQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDL 122
+VFAD ++ + ++H++ G+I V + +S T PP LG+HT VL+ +
Sbjct: 341 DRVFADPQVKARGMQLTLAHKRAGEIPSVANPMRFSETPIRYENAPPLLGQHTRDVLRRV 400
Query: 123 LNYDETTIAK 132
L + IA+
Sbjct: 401 LGASDAEIAE 410
>gi|430004112|emb|CCF19903.1| Acyl-CoA transferases/L-carnitine dehydratase protein [Rhizobium
sp.]
Length = 401
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 120/278 (43%), Positives = 177/278 (63%), Gaps = 4/278 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE----LS 271
PL+ +R+++L R++AGP+ +LAD+GA+VIKVE P GD+ R WGPPF+ + +
Sbjct: 10 PLAGIRVIELARVLAGPWAGQMLADMGADVIKVENPDGGDDTRAWGPPFVEGKDGENLSA 69
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NR K+S+ VD KT EGQ+I++ L DV++ENF G L + L Y+ L IN
Sbjct: 70 AYYHSTNRGKRSIAVDLKTEEGQEIVRRLVATADVVIENFKLGGLKKYGLDYESLKAINP 129
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+L+YCS+TGFG GPY GYD I + G + ITG PDG P K G+A D+ TG+YA
Sbjct: 130 KLVYCSITGFGQDGPYASLAGYDYIVQGMSGFMSITGEPDGQPMKAGVAIADIFTGIYAV 189
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A+ AAL+H KTG+GQ +D LL ++L N NYL +G R G +H N+ P++V
Sbjct: 190 TAIQAALIHAMKTGEGQLVDMALLDVMSAVLANQNMNYLISGTAPSRLGNAHPNISPYEV 249
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
++G++ + G+D Q++ C ++ ++HLA D R+ T
Sbjct: 250 IPVADGHIILAVGNDGQFRRFCTLLGVEHLADDERFAT 287
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C ++ ++HLA D R+ T RV NR + + + A+T + T E L + P +N
Sbjct: 270 FCTLLGVEHLADDERFATNKARVANRVEVRRNLLAETEKWTKTELLAACGDNAVPAGPIN 329
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I+++F D I+ L ++ I V + S T P P LGEHT VL
Sbjct: 330 TIAEMFDDPQIKARGLRVDLEAADGTVIPSVRSPIVLSETPLRYERPSPGLGEHTTAVLA 389
Query: 121 DL 122
+L
Sbjct: 390 EL 391
>gi|114765134|ref|ZP_01444279.1| Putative acyl-CoA transferase/carnitine dehydratase [Pelagibaca
bermudensis HTCC2601]
gi|114542538|gb|EAU45564.1| Putative acyl-CoA transferase/carnitine dehydratase [Roseovarius
sp. HTCC2601]
Length = 362
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 131/283 (46%), Positives = 180/283 (63%), Gaps = 3/283 (1%)
Query: 220 VRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN--NTELSTYFTCV 277
+++++L RI+AGP+ +L+DLGAEVIK+E GD+ RKWGPPF++ + + YF C
Sbjct: 1 MKVIELARILAGPWAGQILSDLGAEVIKIEAS-RGDDTRKWGPPFIDREDERSAAYFHCC 59
Query: 278 NRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCS 337
NR K SV VD TPEGQ +++L + D+L+ENF G L + L + L+++N LIYCS
Sbjct: 60 NRGKHSVVVDISTPEGQAQVRELVAEADILIENFKVGGLAKYGLDFASLAQVNPGLIYCS 119
Query: 338 VTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAA 397
+TGFG GPY R GYD I + G + ITG+P+G P + G+A DL TGLY+ ++AA
Sbjct: 120 ITGFGQDGPYAHRAGYDYIIQGMSGFMSITGNPEGQPQRTGVAITDLFTGLYSVSGILAA 179
Query: 398 LLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNG 457
L K +TGKGQ ID LL V+ N NYL G R G H N+ P+QVF S+G
Sbjct: 180 LHQKQRTGKGQHIDMALLDCAVAATANQAMNYLATGEAPGRTGNYHPNLTPYQVFDCSDG 239
Query: 458 YVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHL 500
Y+ I TG+D QYQ +C+++ L LA P YLT A +A + L
Sbjct: 240 YIIIATGNDPQYQRLCRLLGLDDLAEHPDYLTNADRIANRASL 282
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+++ L LA P YLT A R+ NR L + A+T + T E L + P +N
Sbjct: 254 LCRLLGLDDLAEHPDYLTNADRIANRASLEAHLMAETGKWTKAELLAGCEREGIPAGPIN 313
Query: 61 SISQVFADEHIQ 72
+S+V AD +Q
Sbjct: 314 DLSEVMADPQVQ 325
>gi|402488357|ref|ZP_10835169.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhizobium
sp. CCGE 510]
gi|401812748|gb|EJT05098.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhizobium
sp. CCGE 510]
Length = 397
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 119/278 (42%), Positives = 177/278 (63%), Gaps = 4/278 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE----LS 271
PL+ +R+++L R++AGP+ +LADLGA+VIKVE P GDE R+WGPPF+ + +
Sbjct: 7 PLAGIRVIELARVLAGPWAGQMLADLGADVIKVENPDGGDETRQWGPPFVEGADGENLSA 66
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NR K+S+ D K+PEGQ +++ L DV++ENF G L + L Y L ++N
Sbjct: 67 AYYHAANRGKRSITADLKSPEGQDLVRRLVATADVVIENFKLGGLVKYGLDYDSLRQVNP 126
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+L+YCS+TGFG GPY GYD I + G + ITG PDG P K G+A D+ TG+YA
Sbjct: 127 KLVYCSITGFGQTGPYASLAGYDYIVQGMSGFMSITGEPDGQPMKAGVAIADIFTGIYAV 186
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A+ AAL+H K+G+GQ +D LL Q ++L N NYL +G R G +H N+ P++V
Sbjct: 187 SAIEAALIHALKSGEGQLVDMALLDVQSAVLANQNMNYLVSGAAPTRLGNAHPNISPYEV 246
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
T++ Y+ + G+D Q++ +C ++ L +A D R+ T
Sbjct: 247 VPTADSYLILAVGNDGQFRRLCTILGLDAIAGDERFAT 284
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ L +A D R+ T RV NR + I +T++ + L + + P +N
Sbjct: 267 LCTILGLDAIAGDERFATNKARVANRGEVRSLISTETLKWRRADLLKACEKNAVPAGPIN 326
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I ++FAD ++ L +++ I V V S T P P LGEH++ ++
Sbjct: 327 TIEEMFADPQVEARGLRIDLADAAGTVIPGVRTPVVLSQTPLSYLRPSPRLGEHSEEIMA 386
Query: 121 DLLNYDETTIA 131
+L + D A
Sbjct: 387 ELADRDRKASA 397
>gi|209550204|ref|YP_002282121.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|209535960|gb|ACI55895.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 399
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 119/278 (42%), Positives = 177/278 (63%), Gaps = 4/278 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE----LS 271
PL+ +R+++L R++AGP+ +LADLGA+VIKVE P GD+ R+WGPPF+ + +
Sbjct: 9 PLAGIRVIELARVLAGPWAGQMLADLGADVIKVENPDGGDDTRQWGPPFVEGADGENLSA 68
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NR K+SV D K+PEGQ +++ L DV++ENF G L + L Y L ++N
Sbjct: 69 AYYHAANRGKRSVTADLKSPEGQDLVRRLVASADVVIENFKLGGLVKYGLDYDSLRKVNP 128
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+L+YCS+TGFG GPY GYD I + G + ITG PDG P K G+A D+ TG+YA
Sbjct: 129 KLVYCSITGFGQTGPYASLAGYDYIVQGMSGFMSITGEPDGQPMKAGVAIADIFTGIYAV 188
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A+ AAL+H K+G+GQ +D LL Q + L N NYL +G R G +H N+ P++V
Sbjct: 189 SAIEAALIHALKSGEGQLVDMALLDVQSAALANQNMNYLISGAAPTRLGNAHPNISPYEV 248
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
++GY+ + G+D Q++ +C ++ L+ +A D R+ T
Sbjct: 249 VPAADGYLILAVGNDGQFRRLCAILGLETIAGDERFAT 286
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 59/122 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ L+ +A D R+ T RV NR + + + +T++ + L + P +N
Sbjct: 269 LCAILGLETIAGDERFATNKARVANRGEVRRLVSTETLKWQKADLLKACEANGVPAGPIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I ++FAD ++ L +++ I V V S T P P LGEHT+ +L
Sbjct: 329 TIEEMFADPQVEARGLRIDLADAAGTVIPGVRTPVVLSETPLSYSRPSPRLGEHTEEILA 388
Query: 121 DL 122
+L
Sbjct: 389 EL 390
>gi|388568923|ref|ZP_10155332.1| hypothetical protein Q5W_3679 [Hydrogenophaga sp. PBC]
gi|388263879|gb|EIK89460.1| hypothetical protein Q5W_3679 [Hydrogenophaga sp. PBC]
Length = 421
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 140/295 (47%), Positives = 187/295 (63%), Gaps = 24/295 (8%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQP-----VTGDECRKWGPPFL-----N 266
L +RILD +R++AGP+CT LADLGA+V+KVE+P GD+ R WGPPFL
Sbjct: 4 LDGIRILDCSRVLAGPWCTQTLADLGADVVKVERPRGPNHPGGDDTRGWGPPFLRGRDGQ 63
Query: 267 NTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHL 326
+T + Y+ NRNK+S+ D PEGQ +I++LA + DV VEN+ G + R L + L
Sbjct: 64 DTAEAAYYLGANRNKRSITCDLSLPEGQALIRELAAKADVFVENYKVGDMARYGLDFAAL 123
Query: 327 SEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASI 382
IN +L+YCS+TGFG GPYKDR GYD +GGL+ +TG P G P KVG+A
Sbjct: 124 RAINPRLVYCSITGFGQTGPYKDRAGYDYAVQGMGGLMSLTGERDDLPGGGPQKVGVAVA 183
Query: 383 DLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIE-GK---R 438
DL TGLY+ A+ AAL H +TG+GQ ID LL TQV+ML N+GANYL G E GK R
Sbjct: 184 DLFTGLYSTVAIQAALRHAERTGEGQHIDMALLDTQVAMLANLGANYLVRGREDGKVPGR 243
Query: 439 WGTSHANVVPHQVFKT---SNG---YVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
G +HAN+VP+QVF+ ++G ++ + G+D Q+ C+V LA D R+
Sbjct: 244 AGNAHANIVPYQVFEVAPDADGHAQHIILAVGNDGQFAKFCEVAGRPELARDERF 298
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 63/134 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V LA D R+ RV +R +L +EA + +WL + P +N
Sbjct: 283 FCEVAGRPELARDERFARNQSRVRHRAVLVPMLEAVMKARGKADWLAALEAAKVPCGPIN 342
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+++VFAD ++ +V +H + +V + S T PPP +GEHTD VL
Sbjct: 343 DLAEVFADPQVRARGMVHTWAHPLADAVDLVASPIKMSATPVRNDRPPPLMGEHTDEVLA 402
Query: 121 DLLNYDETTIAKLK 134
+ L D +A+L+
Sbjct: 403 EWLGADAARLAQLR 416
>gi|417093873|ref|ZP_11957745.1| putative acyl-CoA transferase/L-carnitine dehydrogenase protein
[Rhizobium etli CNPAF512]
gi|327194805|gb|EGE61643.1| putative acyl-CoA transferase/L-carnitine dehydrogenase protein
[Rhizobium etli CNPAF512]
Length = 400
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 118/278 (42%), Positives = 178/278 (64%), Gaps = 4/278 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE----LS 271
PL+ +R+++L R++AGP+ +LADLGA+VIKVE P GD+ R+WGPPF+ + +
Sbjct: 10 PLAGIRVIELARVLAGPWAGQMLADLGADVIKVENPDGGDDTRQWGPPFVEGADGENLSA 69
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NR K+S+ D K+PEGQ +++ L DV++ENF G L + L Y L ++N
Sbjct: 70 AYYHAANRGKRSIAADLKSPEGQDLVRRLVSTADVVIENFKVGGLVKYGLDYDSLRKLNP 129
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+L+YCS+TGFG GPY + GYD I + G + ITG PDG P K G+A D+ TG+YA
Sbjct: 130 KLVYCSITGFGQTGPYANLAGYDYIVQGMSGFMSITGEPDGQPMKAGVAIADIFTGIYAV 189
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A+ AAL+H KTG+GQ +D LL Q ++L N NYL +G R G +H N+ P++V
Sbjct: 190 SAIEAALIHALKTGEGQLVDMALLDVQSAVLANQNMNYLVSGAAPTRLGNAHPNISPYEV 249
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
++G++ + G+D Q+ +C ++ L+ +A D R+ T
Sbjct: 250 VPAADGFLILAVGNDGQFARLCGILGLEAIAGDERFAT 287
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ L+ +A D R+ T RV NR L + + +T + + L + P +N
Sbjct: 270 LCGILGLEAIAGDERFATNRARVGNRAELRRLVSTETPKWQKADLLKACEENGVPAGAIN 329
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I ++FAD ++ L +++ I V V S T P P L EH + +L
Sbjct: 330 TIEEMFADSQVRARGLRIDLADAAGTLIPGVRTPVVLSETPLHYVRPSPRLDEHREEILA 389
Query: 121 DL 122
+L
Sbjct: 390 EL 391
>gi|378731881|gb|EHY58340.1| hypothetical protein HMPREF1120_06352 [Exophiala dermatitidis
NIH/UT8656]
Length = 496
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 136/302 (45%), Positives = 190/302 (62%), Gaps = 32/302 (10%)
Query: 215 LPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKW-------------- 260
LPLS +++LDL+R++AGPFCT +LAD GA+VIKVEQP GDE R+W
Sbjct: 77 LPLSGLKVLDLSRVLAGPFCTQILADYGADVIKVEQPGQGDETRQWRTHGETQQKWRAST 136
Query: 261 ----GPPFLNNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKL 316
G P +S YF VNRNK+S+ VD K+P G++++K LA++ DVLV NF+PGK+
Sbjct: 137 TGNQGQP-----TMSLYFAAVNRNKRSMTVDLKSPGGKEVVKALARRSDVLVNNFLPGKM 191
Query: 317 DRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCK 376
++L LGY L N LIY SV+G+G+ GP +DR GYD IA + GLLHITG +G P K
Sbjct: 192 EQLGLGYDELRRDNKGLIYASVSGYGASGPSRDRAGYDAIALAEAGLLHITGDEEGGPTK 251
Query: 377 VGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIE- 435
G+A DL TGLY HGA++AAL +++TG G KI+ +L + +S+LINVG LN ++
Sbjct: 252 PGVAIADLCTGLYTHGAILAALNQRHRTGVGCKIEASLFESALSLLINVGLAALNLDLDK 311
Query: 436 -------GKRWGTSHANVVPHQVFKT-SNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
GKR G H N+VP+ F+T N + +++Q++ C + + L D R+
Sbjct: 312 GPSKRRRGKRLGLGHPNLVPYGGFETKDNKMFFVAANNNRQWKGFCARLGIDGLGDDVRF 371
Query: 488 LT 489
T
Sbjct: 372 ST 373
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 72/139 (51%), Gaps = 8/139 (5%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C + + L D R+ T RVENR+ + ++ + EKT +EWL I +G PY +N
Sbjct: 356 FCARLGIDGLGDDVRFSTNDGRVENRDEINAILQKRFKEKTKDEWLAILEGSGLPYGAIN 415
Query: 61 SISQVFADEHIQ----DIKL-VKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHT 115
+ V A EH Q D+ + + + + G +K++ PAV + VR PP LG+HT
Sbjct: 416 DV--VDALEHPQAKARDMVIDIDDFEAARDGVLKLIAPAVKFEGADMSVRIKPPLLGQHT 473
Query: 116 DYVLKDLLNYDETTIAKLK 134
D +L L Y +A+L+
Sbjct: 474 DEILAG-LGYGPAEVAELR 491
>gi|227819569|ref|YP_002823540.1| acyl-CoA transferase/carnitine dehydratase [Sinorhizobium fredii
NGR234]
gi|227338568|gb|ACP22787.1| acyl-CoA transferase/carnitine dehydratase-like conserved
hypothetical protein [Sinorhizobium fredii NGR234]
Length = 395
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 132/280 (47%), Positives = 176/280 (62%), Gaps = 5/280 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL----S 271
PL +R+L+L RI+AGP+ LADLGAEVIKVE P GD+ R WGPPF+ +
Sbjct: 4 PLKGIRVLELARILAGPWIGQTLADLGAEVIKVESP-AGDDTRTWGPPFVEGEGGEKLDA 62
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NR K+SV +DF T EGQ+ ++ LA Q DVL+ENF G L + L Y L +IN
Sbjct: 63 AYFHACNRGKRSVVLDFTTGEGQEAVRRLAAQSDVLLENFKVGGLSKYGLDYASLKKINP 122
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+LIYCSVTGFG GPY R GYD I + G++ +TG PD P K+G+A D+ TGLY
Sbjct: 123 RLIYCSVTGFGQDGPYAHRAGYDYIVQGMSGIMDLTGEPDREPQKIGVAFADIFTGLYGV 182
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
AV AAL + +TG+GQ+ID LL +L N N+L +G +R G +H N+ P+QV
Sbjct: 183 IAVQAALAQRERTGEGQQIDMALLDCMTGVLANQALNFLVSGKAPRRLGNAHPNIAPYQV 242
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
F TS+G++ + G+D+Q+ C ++ LA D RY T A
Sbjct: 243 FPTSDGHLIVAVGNDRQFIKFCDLLGRPDLASDERYRTNA 282
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 59/124 (47%), Gaps = 2/124 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C ++ LA D RY T A RV++R+ L E+ A+T + + L + V P +N
Sbjct: 263 FCDLLGRPDLASDERYRTNAGRVQHRDTLTPELAAETAKFERDALLAKLEAVGVPGGPIN 322
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVG--PAVAYSLTQPEVRTPPPALGEHTDYV 118
S++ VFAD I K+ E H K G + +S + P LGEHT+ V
Sbjct: 323 SVADVFADPQIVHRKMRVEAPHTGAAAGKTPGVRTPIRFSGAALALERGVPRLGEHTEEV 382
Query: 119 LKDL 122
L ++
Sbjct: 383 LAEI 386
>gi|259481409|tpe|CBF74899.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 442
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 130/302 (43%), Positives = 194/302 (64%), Gaps = 15/302 (4%)
Query: 203 SLDLALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGP 262
SL S+N LPL+ +++LDL+R++AGP+CT +L DLGA++IK+E PV GD+ R WGP
Sbjct: 20 SLATHAKSKNKKLPLAGLKVLDLSRVLAGPYCTQILGDLGADIIKIEHPVRGDDTRAWGP 79
Query: 263 PF---LNNTE---LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKL 316
P+ ++ E S Y+ VNRNK+S+ + F P+GQ I+ L ++ D+LVEN++P L
Sbjct: 80 PYAPYIDGREGPGESAYYLSVNRNKRSLALSFAHPQGQNILHRLVREADILVENYIPNSL 139
Query: 317 DRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCK 376
+ L Y LS IN LIY S+TG+G GPY +RPG+D++ + GL H+TG +GPP K
Sbjct: 140 AKYKLDYPTLSTINPSLIYTSITGYGQTGPYSNRPGFDVMVEAEFGLAHLTGSKNGPPVK 199
Query: 377 VGIASIDLATGLYAHGAVMAALLHKYKT--------GKGQKIDCNLLSTQVSMLINVGAN 428
VG+A DL TGLYA +++AAL + ++ G+GQ +D L QV+ L N+G
Sbjct: 200 VGVAVTDLTTGLYAVQSILAALWQRAQSKENGEAGKGEGQHLDVCLSDCQVATLANMGQG 259
Query: 429 YLNAGI-EGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
L +G + RWGT+H +VVP+Q F T++G + +G +DK + +C +N A D R+
Sbjct: 260 PLISGQKDSGRWGTAHPSVVPYQSFATADGDIFVGGANDKLFGILCARLNKPEWACDARF 319
Query: 488 LT 489
+T
Sbjct: 320 VT 321
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 82/139 (58%), Gaps = 1/139 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C +N A D R++T + RV NR +L + IE +T + +T+EW FQG P+A VN
Sbjct: 304 LCARLNKPEWACDARFVTNSDRVANRSVLEEMIEHETRKLSTKEWQERFQGSGLPFAVVN 363
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ EH+Q +V+ I+H G IK++ P V YS +P +R PP LGEHTD VL
Sbjct: 364 DVLGTMGHEHVQARGMVQTIAHPACGLIKVISPPVKYSNAEPSIRRAPPLLGEHTDEVLM 423
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ + E IA L+++KI+
Sbjct: 424 E-IGLSELEIAGLRKEKIV 441
>gi|73537381|ref|YP_297748.1| L-carnitine dehydratase/bile acid-inducible protein F [Ralstonia
eutropha JMP134]
gi|72120718|gb|AAZ62904.1| L-carnitine dehydratase/bile acid-inducible protein F [Ralstonia
eutropha JMP134]
Length = 411
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 134/288 (46%), Positives = 187/288 (64%), Gaps = 17/288 (5%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL-----S 271
L+ VR+LDL+RI+AGP+C LADLGAEVIKVE+P GD+ R WGPP+L + E +
Sbjct: 9 LAGVRVLDLSRILAGPWCAQNLADLGAEVIKVERPRVGDDTRSWGPPWLPDPEGQPSRDA 68
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
TYF NR K+S+ +D +PEGQ I+++LA + +++EN+ G L R L Y+ L IN
Sbjct: 69 TYFAGANRGKQSLTLDIASPEGQAIVRELAAKSHIVLENYKVGDLKRYGLDYESLKAINP 128
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCS+TG+G GP +PGYD I IGGL+ +TG P G P KVG+A +D+ TG
Sbjct: 129 ALVYCSITGYGQTGPSAHKPGYDFIFQGIGGLMSVTGERDDLPGGGPQKVGVAVVDVLTG 188
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNA----GIEGKRWGTSH 443
+YA AV+AAL H +TG+GQ ID LL ++ VGA + A G R+G +H
Sbjct: 189 MYATVAVLAALRHAERTGEGQHIDMALLDA----VVAVGATPIIAQRITGQAMPRYGNAH 244
Query: 444 ANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
AN+VP+ VF TS+GY+ + G+D Q+Q C+ + LA+D R+ TG+
Sbjct: 245 ANMVPYHVFATSDGYMIVAAGNDGQWQAYCRGIERPDLAVDERFATGS 292
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C+ + LA+D R+ TG+ R+ +RELL +EA + T W+ + P +N
Sbjct: 274 CRGIERPDLAVDERFATGSGRIIHRELLVPMLEAHMRTRPTALWVEALEAQGIPCGPIND 333
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
+QV D ++ +L ++ + V + S T + PPP LGEHT+ VL +
Sbjct: 334 YAQVLDDPQVRHRELQVDLVRKDGAICPTVKSPLRLSTTPVQYDAPPPRLGEHTERVLAE 393
Query: 122 LLNYDETTIAKLKEKKIL 139
+L IA L+E+ ++
Sbjct: 394 VLGLSAERIAALREQGVV 411
>gi|398786280|ref|ZP_10549057.1| L-carnitine dehydratase/bile acid-inducible protein F [Streptomyces
auratus AGR0001]
gi|396993901|gb|EJJ04958.1| L-carnitine dehydratase/bile acid-inducible protein F [Streptomyces
auratus AGR0001]
Length = 408
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 122/273 (44%), Positives = 184/273 (67%), Gaps = 2/273 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L+ +++LDL+RI++GPFCTM+LADLGA+VIKVE PV+GD+ R WGPPF E + YF
Sbjct: 17 LTGLKVLDLSRILSGPFCTMMLADLGADVIKVEDPVSGDDTRVWGPPF--QGEDAAYFHS 74
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
VNRNK+ + VD K E + +I +LA DV+VENF PG RL LGY+ + N ++Y
Sbjct: 75 VNRNKRGIAVDLKDQECRGLIHELAATADVIVENFRPGTAARLGLGYEDVRAGNPGVVYA 134
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S++G+G GPY+ PGYD IA ++ G++ +TG P GPP + G++ DLA G++A ++A
Sbjct: 135 SISGYGQTGPYRREPGYDAIAQAVSGVMSVTGEPGGPPVRFGVSPADLAAGMWAALGILA 194
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
AL + +TG+G+ +D +LL QV+ L V A Y +G +R+G++H +VP+Q F T++
Sbjct: 195 ALRSRERTGRGEWVDVSLLDGQVAWLSYVAAGYFASGDVPQRYGSAHPAIVPYQAFPTAD 254
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
G++ + G+D ++ + L LA DPR+ T
Sbjct: 255 GHLMVAAGNDGLWRRFAAAIGLAALADDPRFAT 287
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 53/125 (42%), Gaps = 1/125 (0%)
Query: 13 DPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEHIQ 72
DPR+ T RV +R L IE + +EW P +N++ Q +
Sbjct: 282 DPRFATNPDRVRHRGELLPLIERALAARGAQEWAARLTEAGIPVGPINTVDQALRHPQVI 341
Query: 73 DIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETTIAK 132
+V EI H G ++ + + S VRTPPP GEHT VL L +A
Sbjct: 342 ARGMVTEIEHPDAGTLRTLASPLKLSEHPAAVRTPPPRHGEHTAQVLT-ALGAGPGQLAG 400
Query: 133 LKEKK 137
L+ +K
Sbjct: 401 LRARK 405
>gi|46202222|ref|ZP_00053565.2| COG1804: Predicted acyl-CoA transferases/carnitine dehydratase
[Magnetospirillum magnetotacticum MS-1]
Length = 406
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 130/280 (46%), Positives = 179/280 (63%), Gaps = 9/280 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELS----- 271
L ++ +LDL+R++AGPFCT +LADLGA+VIKVE+P +GD+ R WGPPFL + E +
Sbjct: 4 LDDILVLDLSRVLAGPFCTQMLADLGAKVIKVEKPGSGDDTRGWGPPFLADPETAEKGDA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NR K SV +D PEGQ++I+ LA + DVLVEN+ G L + L Y L IN
Sbjct: 64 AYYLAANRGKHSVTIDLAKPEGQELIRALAAKADVLVENYKLGGLAKYGLDYASLKTINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TGFG GPY R GYD + ++GG++ +TG P G P K GIA DL+TG
Sbjct: 124 RLVYCSITGFGQDGPYAPRAGYDFMIQAMGGMMSVTGEKDGLPGGGPQKAGIAIADLSTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
L+A AV+AAL +++TG+GQ ID LL QVSM+ N YL +G R G HA +V
Sbjct: 184 LHAVIAVLAALNQRHRTGRGQYIDLGLLDVQVSMMSNQAMTYLVSGKAPGRAGNGHAAIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
P+Q F T +G++ I G+D Q+ + + A D R+
Sbjct: 244 PYQAFATMDGHLIIAVGNDGQFAKLADELGHPEWAEDERF 283
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 66/129 (51%)
Query: 11 ALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEH 70
A D R+ RVE+R++L IEA+T + + L + P +N++ +VFAD
Sbjct: 278 AEDERFALNRTRVEHRDVLTPLIEAETRRYDSAQLLEALERRQIPCGPINTMDKVFADPQ 337
Query: 71 IQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETTI 130
+ L +E+ H + G I V + S + PP LGEHT+ VL ++L D +
Sbjct: 338 AKARGLDQEVPHARAGTIPTVASPLRLSDSPVLYDRGPPLLGEHTESVLTEMLGLDSAML 397
Query: 131 AKLKEKKIL 139
A L++K ++
Sbjct: 398 AALRDKGVV 406
>gi|163858211|ref|YP_001632509.1| acyl-CoA transferase [Bordetella petrii DSM 12804]
gi|163261939|emb|CAP44241.1| Probable acyl-CoA transferase/carnitine dehydratase [Bordetella
petrii]
Length = 406
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 129/282 (45%), Positives = 182/282 (64%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
LSN+++LDL+R++AGP+ + +LADLGA+VIKVE+P GD+ R WGPPFL + T
Sbjct: 5 LSNIKVLDLSRVLAGPWASQILADLGADVIKVERPGRGDDTRSWGPPFLKDQAGADTADG 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NR K+S+ VD +TPEGQ +IK L + DV++EN+ G L RL L Y LS IN
Sbjct: 65 AYFIATNRGKRSITVDLQTPEGQDLIKTLCRDADVVLENYKVGTLARLGLDYAALSRINP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCSVTGFG GP P YD + ++GGL+ +TG P G P KVGI +DL+TG
Sbjct: 125 RLVYCSVTGFGQTGPRAAEPAYDFLIQAMGGLMSVTGERDDKPGGGPQKVGIPIVDLSTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA ++AALL + +TG+G+ +D +L QV +L N N+L +R GT+H N+
Sbjct: 185 VYAALGIVAALLRRTQTGQGEYVDVAMLDVQVGLLANQAMNFLLGNRVPRRTGTAHPNIQ 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P + F ++G + I G+D Q+ +C+V+ LA D RY T
Sbjct: 245 PQRTFGCADGDIVIVVGNDAQFVTLCEVIGQPALARDARYAT 286
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 1/139 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+V+ LA D RY T RV+N+ L ++A + WL + P +N
Sbjct: 269 LCEVIGQPALARDARYATNGKRVQNQASLDPVLDAAFASQPRAHWLGKLKEAGVPAGPIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ +VF D + +++ + H G + V + + V PP LGEHT VL
Sbjct: 329 TVPEVFDDPQVVHRGMLRRLPHPAAGSVPQVMNPLRFGGASLRVDRAPPLLGEHTLEVLG 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
+L DE I L+++ I+
Sbjct: 389 ELGLSDE-QIQGLRDRNII 406
>gi|311106179|ref|YP_003979032.1| CoA-transferase [Achromobacter xylosoxidans A8]
gi|310760868|gb|ADP16317.1| CoA-transferase family III family protein 22 [Achromobacter
xylosoxidans A8]
Length = 401
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 130/289 (44%), Positives = 179/289 (61%), Gaps = 5/289 (1%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
LS VR+LDL+RI+AGP T LL DLGA+V+KVE+P GD+ RKWGPP++N T S
Sbjct: 9 LSGVRVLDLSRILAGPSATQLLGDLGADVVKVEKPDEGDDTRKWGPPYINGQDGRATAES 68
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+S+ +D T G+ + L DVLVEN+ G L R L Y L
Sbjct: 69 AYYLSANRNKRSIALDIATEAGRDTLHQLLGNADVLVENYKVGGLARYGLDYAQLKNRYP 128
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+L+YCS+TGFG GPY R GYD + +GG++ +TG P G P KVG+ D+ TG+YA
Sbjct: 129 RLVYCSITGFGQTGPYAKRAGYDFLIQGMGGIMSLTGEPQGAPMKVGVGIADVMTGMYAA 188
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
++AAL H+ TG GQ ID +LL +Q++ L+N G NYL A R G H N+VP+QV
Sbjct: 189 VGILAALRHRDLTGLGQHIDISLLDSQIAWLVNAGTNYLAAQELPTRLGNGHPNIVPYQV 248
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHL 500
F ++G + + G+D Q++ C+V + LA D RY + A +A + L
Sbjct: 249 FDAADGPMILAVGNDAQFRRFCEVAGVAGLADDARYASNAARVAHRAEL 297
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 2/123 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V + LA D RY + A RV +R LC+ ++ + + WL + V P VN
Sbjct: 269 FCEVAGVAGLADDARYASNAARVAHRAELCERVQDALALRPRKTWLEQLEAVGVPCGPVN 328
Query: 61 SISQVFADEHIQ--DIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
+ VF D H+Q L + + G++ ++ + S T R PPP L EH +
Sbjct: 329 DLRDVFNDPHVQARGAHLRMPCAWAQGGELNLLANPLKLSATPVSYRRPPPRLDEHAQQI 388
Query: 119 LKD 121
L D
Sbjct: 389 LAD 391
>gi|398350933|ref|YP_006396397.1| hypothetical protein USDA257_c10490 [Sinorhizobium fredii USDA 257]
gi|390126259|gb|AFL49640.1| uncharacterized protein YfdE [Sinorhizobium fredii USDA 257]
Length = 396
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 131/280 (46%), Positives = 177/280 (63%), Gaps = 5/280 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN----TELS 271
PL +R+L+L RI+AGP+ LADLGAEVIKVE P GD+ R WGPPF+ T +
Sbjct: 4 PLKGIRVLELARILAGPWIGQTLADLGAEVIKVESPA-GDDTRTWGPPFVEGEGGETLDA 62
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NR K+SV +DF T EGQ+ ++ LA Q DVL+ENF G L + L Y+ L + N
Sbjct: 63 AYFHACNRGKRSVVLDFTTQEGQEAVRRLAAQSDVLLENFKVGGLAKYGLDYESLRQTNP 122
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+LIYCSVTGFG GPY R GYD I + G++ +TG PD P K+G+A D+ TGLY
Sbjct: 123 RLIYCSVTGFGQDGPYAHRAGYDYIIQGMSGIMDLTGEPDREPQKIGVAFADIFTGLYGV 182
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
AV AAL + +TG+GQ+ID LL +L N N+L +G +R G +H N+ P+QV
Sbjct: 183 IAVQAALAQRERTGEGQQIDMALLDCMTGVLANQALNFLVSGKAPRRLGNAHPNIAPYQV 242
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
F T++G++ + G+D+Q+ C ++ LA D RY T A
Sbjct: 243 FATADGHLIVAVGNDRQFVKFCDLLGRPDLAADERYRTNA 282
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 59/135 (43%), Gaps = 24/135 (17%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C ++ LA D RY T A RV +R++L E+ A+T + + L + P +N
Sbjct: 263 FCDLLGRPDLAADERYRTNAGRVRHRDILTPELAAETAKFERDTLLAKLEAAGVPGGPIN 322
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPP------------ 108
+++ VFAD I +L E H A + T P VRTP
Sbjct: 323 TVADVFADPQIAHRQLRMETPHRG-----------AATGTSPGVRTPVRFSGASLALERG 371
Query: 109 -PALGEHTDYVLKDL 122
P LGEHT VL ++
Sbjct: 372 VPRLGEHTAEVLAEI 386
>gi|295697574|ref|YP_003590812.1| L-carnitine dehydratase/bile acid-inducible protein F [Kyrpidia
tusciae DSM 2912]
gi|295413176|gb|ADG07668.1| L-carnitine dehydratase/bile acid-inducible protein F [Kyrpidia
tusciae DSM 2912]
Length = 395
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 125/273 (45%), Positives = 177/273 (64%), Gaps = 4/273 (1%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L+ + I+DLTRI++GPFCTM AD+GAEVIKVE P GD+ R+WGPPF+ S Y+
Sbjct: 4 LAGLTIVDLTRILSGPFCTMYFADMGAEVIKVEPP-GGDDTRRWGPPFVKGE--SAYYLS 60
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
VNRNK+SV +D KTP G++ +K L ++ DV+VENF PG L+RL G++ L IN Q+I
Sbjct: 61 VNRNKRSVVLDIKTPLGKEALKRLIRRADVVVENFRPGTLERLGFGFEVLRRINPQIILA 120
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S++GFG GPY+D PGYD+IA +GG++ +TG P GPP KVG + D+ G++A ++
Sbjct: 121 SISGFGQTGPYRDDPGYDLIAQGMGGIMSVTGQPGGPPTKVGFSVADIGAGMWAIIGILT 180
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
ALL++ K G Q ID +LL VS V AN+ G E G H N+ P+Q F + +
Sbjct: 181 ALLNREKVG-AQWIDVSLLDAVVSWQTYVAANFFATGEEPAPAGNVHPNIAPYQSFASKD 239
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
GY + G+D+ ++ C+ + DPR+ T
Sbjct: 240 GYFNLAVGNDELWRRFCEAVGRPEWIEDPRFCT 272
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 70/135 (51%), Gaps = 3/135 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+ + DPR+ T + RV+NR+ L + ++ +TT EW+ +F+ P +
Sbjct: 255 FCEAVGRPEWIEDPRFCTNSRRVQNRQELVELLQPLFQSRTTAEWVGLFRSRRIPAGPIY 314
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVR--TPPPALGEHTDYV 118
S+++AD + K+++ H+K G+ + +G + + R PPPALGEH+ +
Sbjct: 315 RFSELYADPQVLARKMIRMFHHKKIGEFRTIGIPIHFLHQDGHGREIAPPPALGEHSRQI 374
Query: 119 LKDLLNYDETTIAKL 133
L+ L + E I ++
Sbjct: 375 LRG-LGFSERDIEQM 388
>gi|120402853|ref|YP_952682.1| L-carnitine dehydratase/bile acid-inducible protein F
[Mycobacterium vanbaalenii PYR-1]
gi|119955671|gb|ABM12676.1| L-carnitine dehydratase/bile acid-inducible protein F
[Mycobacterium vanbaalenii PYR-1]
Length = 374
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 117/273 (42%), Positives = 184/273 (67%), Gaps = 2/273 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L V ++D +R++AGP+ TM+L D GAEVIKVE+P GD+ R+WGPP+ +++ ++TYF
Sbjct: 5 LDGVVVVDFSRVLAGPYATMMLGDFGAEVIKVERPGVGDDTRQWGPPY-DSSGVATYFNA 63
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
VNRNK+SV +D TP+G+Q +DL D++VENF PG ++RL LGY+ L + +IYC
Sbjct: 64 VNRNKRSVVLDLSTPDGRQQARDLVAGADIVVENFRPGTMERLGLGYEDLRAVRPDVIYC 123
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S+TGFG +G PGYD++ ++GGL+ +TG G P K G+A +D+ GL+A ++A
Sbjct: 124 SITGFG-RGGGAALPGYDLLVQAVGGLMSVTGTEPGDPTKAGVALVDVLAGLHALSGILA 182
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
AL H+ +TG+GQ++D +LLS +S ++N + +L AG+ G H ++ P+Q F T++
Sbjct: 183 ALHHRGRTGEGQRVDTDLLSVLLSSMVNQASGFLGAGVVPAMMGNRHPSIAPYQTFDTAD 242
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+ + G+DKQ++ + LA DPR++T
Sbjct: 243 RPIAVAVGNDKQFRAFSTAIGQPELADDPRFVT 275
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 44/105 (41%), Gaps = 3/105 (2%)
Query: 9 HLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFAD 68
LA DPR++T RV NR+ LC I + W V P +N +S+ FA
Sbjct: 266 ELADDPRFVTNPARVANRDALCALIVPALKAHGADHWYAKLTTVGVPAGPINDLSEAFAF 325
Query: 69 EHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGE 113
I ++ ++ P V S T R+ PPALG+
Sbjct: 326 ARGLGIDAAVQVPGSPA--PQVANP-VTMSATPVSYRSGPPALGD 367
>gi|328544510|ref|YP_004304619.1| CoA-transferase family III protein-like protein [Polymorphum gilvum
SL003B-26A1]
gi|326414252|gb|ADZ71315.1| CoA-transferase family III protein-like protein [Polymorphum gilvum
SL003B-26A1]
Length = 399
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 129/292 (44%), Positives = 183/292 (62%), Gaps = 5/292 (1%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL--- 270
S PL +++L++ RI+AGP+ LADLGA+VIKVE P GD+ R WGPPF+ +
Sbjct: 2 SAPLEGLKVLEVARILAGPWAGQTLADLGADVIKVESPA-GDDTRTWGPPFVTSDTGEAL 60
Query: 271 -STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEI 329
+ Y+ NR K+S+ +DF+TPEGQ +++ LA DVL+ENF G L + L Y L E+
Sbjct: 61 DAAYYHACNRGKRSITIDFQTPEGQALVRRLAADADVLIENFKVGGLAKYGLDYASLKEV 120
Query: 330 NSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLY 389
N +LIYCS+TGFG GPY R GYD + + G++ +TG PDG P KVG+A D+ TG Y
Sbjct: 121 NPRLIYCSITGFGQDGPYAHRAGYDFMIQGMAGIMDLTGAPDGEPQKVGVAIADIFTGTY 180
Query: 390 AHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPH 449
++AAL + +TG G+ +D LL TQV++L N NY +G +R G +H N+VP+
Sbjct: 181 GVVGILAALRRRDRTGVGEHVDMALLDTQVAVLANQAQNYFVSGKAPRRLGNAHPNIVPY 240
Query: 450 QVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
QVF S+G++ I G+D Q+ +C V+ A DP Y T A +A L+
Sbjct: 241 QVFPASDGHLIIACGNDGQFVRLCGVLGNPPFASDPAYATNAGRVAGRDALV 292
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 2/124 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C V+ A DP Y T A RV R+ L +I A T T ++ L + V P +N
Sbjct: 263 LCGVLGNPPFASDPAYATNAGRVAGRDALVPQIAALTRTFTRDDLLAQLEQVGVPAGPIN 322
Query: 61 SISQVFADEHIQD--IKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
+++ VF D ++ +K+ G + V + +S + + P LGEHT +
Sbjct: 323 TVADVFDDPQVRHRAMKVDLPAPGTAAGTLATVRTPIRFSDSTLTIDRAAPRLGEHTGEI 382
Query: 119 LKDL 122
L ++
Sbjct: 383 LAEI 386
>gi|190892614|ref|YP_001979156.1| acyl-CoA transferase/L-carnitine dehydrogenase [Rhizobium etli CIAT
652]
gi|190697893|gb|ACE91978.1| putative acyl-CoA transferase/L-carnitine dehydrogenase protein
[Rhizobium etli CIAT 652]
Length = 400
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 118/278 (42%), Positives = 177/278 (63%), Gaps = 4/278 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE----LS 271
PL+ +R+++L R++AGP+ +LADLGA+VIKVE P GD+ R+WGPPF+ + +
Sbjct: 10 PLAGIRVIELARVLAGPWAGQMLADLGADVIKVENPDGGDDTRQWGPPFVEGADGENLSA 69
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NR K+S+ D K+PEGQ +++ L DV++ENF G L + L Y L ++N
Sbjct: 70 AYYHAANRGKRSIAADLKSPEGQDLVRRLVSTADVVIENFKVGGLVKYGLDYDSLRKLNP 129
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+L+YCS+TGFG GPY + GYD I + G + ITG PDG P K G+A D+ TG+YA
Sbjct: 130 KLVYCSITGFGQTGPYANLAGYDYIVQGMSGFMSITGEPDGQPMKAGVAIADIFTGIYAV 189
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A+ AAL+H KTG+GQ +D LL Q ++L N NYL +G R G +H N+ P++V
Sbjct: 190 SAIEAALIHALKTGEGQLVDMALLDVQSAVLANQNMNYLVSGAAPTRLGNAHPNISPYEV 249
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
++GY+ + G+D Q+ +C ++ L+ + D R+ T
Sbjct: 250 VPAADGYLILAVGNDGQFARLCGILGLEAIVGDERFAT 287
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 56/122 (45%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ L+ + D R+ T RV NR L + + +T++ + L + P +N
Sbjct: 270 LCGILGLEAIVGDERFATNRARVGNRAELRRLVSTETLKWQKADLLKACEENGVPAGAIN 329
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I ++FAD ++ L +++ I V V S T P P L EH + +L
Sbjct: 330 TIEEMFADSQVRARGLRIDLADAVGTLIPGVRTPVVLSETPLHYVRPSPRLDEHREEILA 389
Query: 121 DL 122
+L
Sbjct: 390 EL 391
>gi|159045809|ref|YP_001534603.1| L-carnitine dehydratase/bile acid-inducible protein F
[Dinoroseobacter shibae DFL 12]
gi|157913569|gb|ABV95002.1| L-carnitine dehydratase/bile acid-inducible protein F
[Dinoroseobacter shibae DFL 12]
Length = 368
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 124/278 (44%), Positives = 176/278 (63%), Gaps = 3/278 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL--NNTELSTY 273
PL +++++L RI+AGP+ LADLGAEVIKVE P GD+ R WGPPF+ + + Y
Sbjct: 3 PLEGLKVVELARILAGPWIGQALADLGAEVIKVEAP-QGDDTRTWGPPFITRDGDRSAAY 61
Query: 274 FTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQL 333
F NR K+SV DF+T GQ ++DL D+L+ENF G L + L Y L+ IN +L
Sbjct: 62 FYAANRGKRSVVADFRTEAGQAKVRDLVADADILIENFKVGGLAKYGLDYAALAAINPRL 121
Query: 334 IYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGA 393
IYCSVTGFG GPY R GYD + + GL+ ITG PD P KVG+A D+ TGLY
Sbjct: 122 IYCSVTGFGQDGPYAHRAGYDFMIQGMSGLMSITGEPDAAPQKVGVAVTDIVTGLYGTIG 181
Query: 394 VMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFK 453
++AA+ +++TG+GQ +D LL ++L N N L G R G +H N+VP+QVF+
Sbjct: 182 ILAAVEQRHRTGRGQHLDMALLDCATALLANQAMNQLATGTAPTRLGNAHPNIVPYQVFE 241
Query: 454 TSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
++G++ + G+D Q+ +C++++L A DPR+ T A
Sbjct: 242 AADGHMILAVGNDGQFASLCEILDLPGTASDPRFATNA 279
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C++++L A DPR+ T A RVENR+ L + + + + + L + P +N
Sbjct: 260 LCEILDLPGTASDPRFATNAGRVENRDALTELLSLRLRGWSVAQLLSALEAAGVPAGPIN 319
Query: 61 SISQVFADEHIQ 72
+I QVFAD +Q
Sbjct: 320 TIDQVFADPQVQ 331
>gi|83311708|ref|YP_421972.1| acyl-CoA transferase/carnitine dehydratase [Magnetospirillum
magneticum AMB-1]
gi|82946549|dbj|BAE51413.1| Predicted acyl-CoA transferase/carnitine dehydratase
[Magnetospirillum magneticum AMB-1]
Length = 411
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 127/281 (45%), Positives = 180/281 (64%), Gaps = 9/281 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL-----S 271
L ++ +LDL+R++AGP+CT +L+DLGA+VIKVE+P GD+ R WGPPFL + +
Sbjct: 9 LDDILVLDLSRVLAGPWCTQMLSDLGAKVIKVEKPGAGDDTRGWGPPFLTDPATEEKGDA 68
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NR K SV +D TPEGQ++I+ LA + DVLVEN+ G L + L Y L +N
Sbjct: 69 AYYLAANRGKHSVTIDMATPEGQELIRHLAAKADVLVENYKLGGLKKYGLDYDALKAVNP 128
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TGFG GPY R GYD + ++GG++ +TG P G P K GIA DL+TG
Sbjct: 129 RLVYCSITGFGQTGPYAPRAGYDFMIQAMGGMMSVTGEKDALPGGGPQKAGIAIADLSTG 188
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
L+A A++AAL +++TG+GQ ID LL QVSM+ N YL G R G HA +V
Sbjct: 189 LHAVIAILAALNQRHRTGRGQYIDLGLLDVQVSMMSNQAQTYLVGGKAPARAGNGHAAIV 248
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYL 488
P+Q F T +G++ I G+D Q+ + +V+ A D R++
Sbjct: 249 PYQAFPTQDGHLIIAVGNDGQFAKLAEVLGHPEWAADQRFI 289
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+ +V+ A D R++ RVE+RE+L +EA+T + L + P +N
Sbjct: 273 LAEVLGHPEWAADQRFILNRSRVEHREVLVPLLEAETRRFPSAHLLDALERRQIPCGPIN 332
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ +VF D Q L +E+ H G + V + S + PP LGEHT+ VL
Sbjct: 333 TMDKVFDDPQAQARNLRQEVPHALAGTVPTVASPLRLSDSPVIYDRGPPLLGEHTEVVLG 392
Query: 121 DLLNYDETTIAKLKEKKIL 139
DLL D + L+ K ++
Sbjct: 393 DLLGLDAPAVEALRAKGVV 411
>gi|228990462|ref|ZP_04150427.1| L-carnitine dehydratase/bile acid-inducible protein F [Bacillus
pseudomycoides DSM 12442]
gi|228768988|gb|EEM17586.1| L-carnitine dehydratase/bile acid-inducible protein F [Bacillus
pseudomycoides DSM 12442]
Length = 395
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 126/285 (44%), Positives = 183/285 (64%), Gaps = 2/285 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L + I+DL+R++AGPFCTM+L DLGAEVIKVE GD+ R WGPPF+ S YF C
Sbjct: 5 LQGITIIDLSRVLAGPFCTMILGDLGAEVIKVENIGNGDDTRGWGPPFVEGE--SAYFLC 62
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
NRNK+S+ ++ K+ G+ I+K L D++V+NF PG L+R+ LGY L E+ +I
Sbjct: 63 ANRNKESLTLNLKSEMGKDILKKLVSHADIVVQNFKPGTLERMGLGYDVLQEVKGDIILA 122
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S++GFG KGP PGYD + ++ GL+ ITG D P KVG+A D+ TGL+ ++A
Sbjct: 123 SISGFGQKGPASHLPGYDYMIQAMSGLMSITGGKDEEPAKVGVAISDVLTGLFTCIGILA 182
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
AL H+ +TG+GQ+ID +L +Q++ L+NV +NYL G +R G H N+VP+QVF+ +
Sbjct: 183 ALQHRNRTGEGQEIDISLFDSQLAALVNVASNYLCTGELPERLGNQHPNIVPYQVFEAED 242
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
G + + G+D+Q+ C ++ Q L+ RY T A L L+
Sbjct: 243 GDLVVAVGNDEQFHKFCLLLGRQDLSSLERYKTNASRLQHKDELV 287
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 64/137 (46%), Gaps = 1/137 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C ++ Q L+ RY T A R+++++ L I + +K EEW + P +
Sbjct: 258 FCLLLGRQDLSSLERYKTNASRLQHKDELVNMIAIEMKKKKKEEWKQLLDEAGIPNGPIL 317
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ + E + + H ++K+VG + S T +++ PP GEHT+ +L+
Sbjct: 318 NVKEALETEQAVARDMTVHMKHPTIENLKLVGSPLKLSRTPVQMQKYPPLHGEHTEKILR 377
Query: 121 DLLNYDETTIAKLKEKK 137
L Y + I ++ + +
Sbjct: 378 K-LGYSQEIITRMTKNQ 393
>gi|406040737|ref|ZP_11048092.1| L-carnitine dehydrogenase [Acinetobacter ursingii DSM 16037 = CIP
107286]
Length = 407
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 135/280 (48%), Positives = 182/280 (65%), Gaps = 9/280 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
L+ R+LDL+RI+AGP+C+ +LADLGAEVIK+E+P GD+ R WGPPFL N T S
Sbjct: 4 LTGFRVLDLSRILAGPWCSQILADLGAEVIKIEKPFQGDDTRIWGPPFLKNDNGQDTGES 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NR K SV +D T EGQ +IK + + DVL+EN+ G L + L Y+ LS+IN
Sbjct: 64 AYYLSTNRGKHSVAIDMATAEGQALIKKMVLESDVLIENYKAGSLKKYGLDYESLSQINP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TGFG KGP PGYD I +GG++ +TG P G P K G+A DL TG
Sbjct: 124 KLVYCSITGFGQKGPRAAEPGYDFIIQGMGGMMSVTGERDDLPGGGPQKAGLAFADLTTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA A+ AALL + TG+GQ ID LL TQV+ L + NYL + R+G +HAN+V
Sbjct: 184 LYAAIAIQAALLSRVTTGEGQHIDMALLDTQVASLSVLAMNYLTSAKVPGRFGNAHANIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
P+QVFK G I G+D+Q++ +C+ + L L DP++
Sbjct: 244 PYQVFKAQEGEFIIACGNDQQFKALCESIGLPELCKDPKF 283
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 2/139 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + L L DP++ RV +RE + ++ M + + W+ V P +N
Sbjct: 268 LCESIGLPELCKDPKFEKNKGRVTHREEISAILQQHFMTQPAQAWVERIHAVKVPVGMIN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ Q +E + ++V + H D +G + S T + PP LGE TD +L
Sbjct: 328 NLQQTLEEEQVVFREMVVNMQHPLRSDYVSIGSPIKLSKTPVQYVKTPPYLGEDTDSILD 387
Query: 121 DLLNYDETTIAKLKEKKIL 139
L T + LK+KK++
Sbjct: 388 RFLT--PTELQDLKDKKVV 404
>gi|332187540|ref|ZP_08389277.1| coA-transferase III family protein [Sphingomonas sp. S17]
gi|332012469|gb|EGI54537.1| coA-transferase III family protein [Sphingomonas sp. S17]
Length = 374
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 128/282 (45%), Positives = 176/282 (62%), Gaps = 6/282 (2%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELS-- 271
+ PL+ +++++L RI+AGP+ +LADLGAEV+KVE P GD+ R+WGPPF+ N + S
Sbjct: 4 AAPLAGLKVVELARILAGPWAGQVLADLGAEVVKVESP-DGDDTRRWGPPFIANPDGSQD 62
Query: 272 -TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
YF NR K SV DF T EGQ ++DL DV++ENF G L R L Y LS IN
Sbjct: 63 AAYFHAANRGKSSVVADFSTTEGQAKVRDLIADADVVIENFKLGGLARYGLDYDSLSAIN 122
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYA 390
+L+YCS+TGFG GPY R GYD I + G++ +TG P G P K+G+A D+ TGLYA
Sbjct: 123 PRLVYCSITGFGQDGPYAARAGYDFIVQGMSGIMDLTGEPGGAPQKIGVALADIMTGLYA 182
Query: 391 HGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQ 450
A+ AAL + +TG+GQ+ID LL T +L N NYL +G R G +H N+VP+
Sbjct: 183 VIAIQAALHMRERTGRGQQIDMALLDTMTGVLANQAMNYLASGTTPTRLGNAHPNIVPYA 242
Query: 451 VFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
F S+G+ + G+D Q++ ++ + DPRY T AL
Sbjct: 243 AFPASDGWFILAVGNDAQFRRFAAIVGID--GDDPRYTTNAL 282
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%)
Query: 13 DPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEHI 71
DPRY T ALR ++R +L + IEA T + L + P +N++ Q FAD I
Sbjct: 274 DPRYTTNALRCQHRVVLTQAIEAATATWPRDTLLARLEEAGVPAGPINTVEQAFADPQI 332
>gi|87121584|ref|ZP_01077472.1| hypothetical protein MED121_04718 [Marinomonas sp. MED121]
gi|86163116|gb|EAQ64393.1| hypothetical protein MED121_04718 [Marinomonas sp. MED121]
Length = 404
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 124/279 (44%), Positives = 178/279 (63%), Gaps = 5/279 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL----- 270
PL ++R+LDL+R++AGP+ + LLAD+GA VIKVE+P GD+ R WGPPF+
Sbjct: 4 PLEHIRVLDLSRVLAGPWASQLLADMGAHVIKVERPKKGDDTRFWGPPFIKEASADQPPQ 63
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
+ YF C NRNK+S+ +D +T +GQ +IK L DVL+ENF G L + L Y+ + ++N
Sbjct: 64 AAYFHCANRNKESIAIDIRTKQGQDVIKSLIACSDVLIENFKVGGLAQYGLDYETVHQLN 123
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYA 390
+L+YCS+TGFG GP + GYD + GGL+ +TG P+G P KVG+A +D+ TGLYA
Sbjct: 124 PRLVYCSITGFGQSGPSAHKAGYDAMIQGEGGLMSLTGEPNGEPMKVGVALVDVMTGLYA 183
Query: 391 HGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQ 450
++AAL+ ++ T GQ +D LL Q++ L N G NYL +G KR G H N+VP+Q
Sbjct: 184 SNGILAALMARHTTQLGQHLDIALLDVQMATLANQGMNYLASGENPKRQGNGHPNIVPYQ 243
Query: 451 VFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
F T +G V + G+D+Q+ C L L + R+ T
Sbjct: 244 TFATQDGNVILAIGNDEQFAKFCTQAKLGSLLDNDRFKT 282
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 63/135 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C L L + R+ T RV +R+ L I A+ E+T W+ + V+ P VN
Sbjct: 265 FCTQAKLGSLLDNDRFKTNEQRVMHRDKLIPIIAARLAEETMSFWIESLEQVAVPCGAVN 324
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ +VF ++ K+V+E+ +K + + S T ++ PP LG+ + +L+
Sbjct: 325 TLDKVFDHPQLKHRKMVRELPDKKGEKFASIVSPINLSSTPLSYKSAPPDLGQDSKKILQ 384
Query: 121 DLLNYDETTIAKLKE 135
L ++ + L E
Sbjct: 385 HTLGLEQDEVQALFE 399
>gi|400595998|gb|EJP63782.1| CoA-transferase family III [Beauveria bassiana ARSEF 2860]
Length = 445
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 133/313 (42%), Positives = 193/313 (61%), Gaps = 12/313 (3%)
Query: 191 NENKISLYENFYSLDLALSSEN---PSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIK 247
N + S Y+ F SS + LPL R+LD+TR++AGP+CT +L DLGAE+IK
Sbjct: 13 NGCRSSTYQPFAPSTRRWSSASGVSTPLPLEGYRVLDMTRVLAGPYCTQILGDLGAEIIK 72
Query: 248 VEQPVTGDECRKWGPPFLNNTELS--------TYFTCVNRNKKSVCVDFKTPEGQQIIKD 299
+E PV GD+ R WGPP+ T+ S YF NRNKKS+ + F+ G I+
Sbjct: 73 IEHPVRGDDTRAWGPPYARYTKESGRQGPGEAAYFLGANRNKKSIGISFQHKGGVDILHK 132
Query: 300 LAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAAS 359
L ++CD+LVEN++PG L + + Y+ L +IN LIY S+TG+G GPY R GYD++ +
Sbjct: 133 LVEKCDILVENYLPGTLKKYGMDYETLGKINPGLIYTSITGYGQTGPYSSRAGYDVMVEA 192
Query: 360 IGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQV 419
GL+HITG DGPP KVG+A DL TGLYA ++MAALL + ++GKGQ +D L Q
Sbjct: 193 EFGLMHITGARDGPPVKVGVAVTDLTTGLYASNSIMAALLGRGRSGKGQHLDVALSDCQT 252
Query: 420 SMLINVGANYLNAG-IEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNL 478
+ L N+ ++ L +G + RWGT+H ++VP++ FKT +G + G G+D+ + + + +
Sbjct: 253 ATLANIASSCLISGKRDAGRWGTAHPSIVPYKSFKTKDGDILFGGGNDRLFGILAEGLGK 312
Query: 479 QHLALDPRYLTGA 491
D +Y T A
Sbjct: 313 PQWKDDVKYKTNA 325
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 77/128 (60%)
Query: 13 DPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEHIQ 72
D +Y T A RV NR L +IEA + +KTT+EWL +F+G PYA VN + EH +
Sbjct: 318 DVKYKTNADRVANRVELEHKIEALSQQKTTKEWLAVFEGKGMPYAAVNDVQDTLNLEHTR 377
Query: 73 DIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETTIAK 132
+V E+ H G IK+V V +S TQP VRTPPP LG+HT+ +L + L E I
Sbjct: 378 ARNMVVEVEHGGCGPIKLVNSPVKFSETQPGVRTPPPMLGQHTNELLSEHLGLSEDDITA 437
Query: 133 LKEKKILG 140
LK++ I+G
Sbjct: 438 LKQQGIVG 445
>gi|326388273|ref|ZP_08209876.1| L-carnitine dehydratase/bile acid-inducible protein F
[Novosphingobium nitrogenifigens DSM 19370]
gi|326207439|gb|EGD58253.1| L-carnitine dehydratase/bile acid-inducible protein F
[Novosphingobium nitrogenifigens DSM 19370]
Length = 393
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 126/283 (44%), Positives = 178/283 (62%), Gaps = 4/283 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL---NNTELST 272
PL+ +++++L RI+AGP+ +LADLGA+VIKVE P GD+ R WGPPF+ + T +
Sbjct: 20 PLAGLKVVELARILAGPWAGQILADLGADVIKVESP-AGDDTRSWGPPFIEYADGTRDAA 78
Query: 273 YFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQ 332
YF NR K+SV DF T EGQ +++L DV++ENF G L + L YK L+ +N +
Sbjct: 79 YFHAANRGKRSVTADFTTTEGQAFVRELVADADVVIENFKLGGLVKYGLDYKSLNALNPR 138
Query: 333 LIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHG 392
L+YCS+TGFG GPY R GYD I + G++ +TG PDG P K+G+A D+ TGLYA
Sbjct: 139 LVYCSITGFGQDGPYAPRAGYDFIVQGMSGIMDLTGEPDGAPQKIGVAFADIMTGLYAVI 198
Query: 393 AVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVF 452
A+ AAL + +TG+G ID L T V +L N NYL +GI KR G +H N+ P+ V+
Sbjct: 199 AIQAALAARERTGQGDHIDMALFDTMVGVLGNQALNYLVSGISPKRMGNAHPNIAPYAVY 258
Query: 453 KTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILA 495
T +G+ + G+D Q+ C++ L DPR++ A LA
Sbjct: 259 PTRDGWFILAVGNDGQFGKFCEIAGCPQLLGDPRFVGNAARLA 301
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 34/71 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C++ L DPR++ A R+ +R++L + A T + ++ L P +N
Sbjct: 278 FCEIAGCPQLLGDPRFVGNAARLAHRDVLEDAVRAATSQWARDDLLAALAAAGVPAGPIN 337
Query: 61 SISQVFADEHI 71
+++ F+D I
Sbjct: 338 TVADAFSDPQI 348
>gi|443922926|gb|ELU42270.1| CAIB/BAIF family enzyme [Rhizoctonia solani AG-1 IA]
Length = 437
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 133/288 (46%), Positives = 181/288 (62%), Gaps = 27/288 (9%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL----- 270
PL +R++DLTR++AGP TMLLADLGA+VIK+E+ GD+ R W PP E
Sbjct: 42 PLRGIRVVDLTRVLAGPTATMLLADLGADVIKIEEVKRGDDTRSWSPPSAPVLETQPSNA 101
Query: 271 ------STYFTCVNRNKKSVCVDFKTPEGQQIIKDLA----KQCDVLVENFVPGKLDRLN 320
S YF NRNK+S+ V+FK P G+ ++ L DVLVENF+ GKL +
Sbjct: 102 VHLPPESAYFLATNRNKRSITVNFKDPRGR-LVSTLVLLPESNTDVLVENFISGKLASMG 160
Query: 321 LGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIA 380
LG++ +IN +L+Y S+TG+G GPY+ GYD++ GL+HITG PDGPPCKVG+A
Sbjct: 161 LGWEDCKKINEKLVYASITGYGQTGPYRQAAGYDVVIEGEAGLMHITGEPDGPPCKVGVA 220
Query: 381 SIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWG 440
D++TGLYAHGA+MA LL + +TGKG IDCNL TQ++ L N+ +NYL E R G
Sbjct: 221 VTDISTGLYAHGAIMAGLLSRQQTGKGVWIDCNLFETQIAGLANIASNYLIGNKEASRHG 280
Query: 441 TSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMC-KVMNLQHLALDPRY 487
TSH ++VP+QVF +G Q+ + KV+ LA+D ++
Sbjct: 281 TSHPSIVPYQVFPCKDG----------QFALLADKVLGKPELAIDAKF 318
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 62/114 (54%)
Query: 3 KVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSI 62
KV+ LA+D ++ + RV+NR L + I MEK + WL FQG+ P+ +N+I
Sbjct: 305 KVLGKPELAIDAKFSSNGQRVKNRAELVQIITDTLMEKNRDHWLEKFQGLGVPHGPINNI 364
Query: 63 SQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTD 116
Q F + + E+ H + G IK+V PAV Y+ + + PPP L +HTD
Sbjct: 365 EQTFDHPQAKARGVTVEVEHPRAGKIKMVAPAVHYNGKRMPITRPPPYLSQHTD 418
>gi|119714319|ref|YP_921284.1| formyl-CoA transferase [Nocardioides sp. JS614]
gi|119534980|gb|ABL79597.1| Formyl-CoA transferase [Nocardioides sp. JS614]
Length = 412
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 126/282 (44%), Positives = 184/282 (65%), Gaps = 2/282 (0%)
Query: 210 SENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE 269
+E LPLS VR++DLTR ++GPFCTMLL D GAEV+K+E+PV GD+ R+ P +
Sbjct: 4 AEAAVLPLSGVRVVDLTRALSGPFCTMLLGDQGAEVVKIERPVVGDDTRRQSNPMVGTE- 62
Query: 270 LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEI 329
++ F VNRNK+SV VD + G ++++ L DV+VENF PGK +++ LGY+ L E+
Sbjct: 63 -NSAFLAVNRNKRSVAVDLRAEAGVEVVRRLVAVSDVVVENFRPGKAEQMGLGYEQLREL 121
Query: 330 NSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLY 389
N L+YCS++G+GS GPY R GY A + GGL+ +TG P KVG++ +D TGLY
Sbjct: 122 NPGLVYCSISGWGSDGPYAARGGYASTAEAAGGLMSVTGERGRGPVKVGVSIVDSLTGLY 181
Query: 390 AHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPH 449
A A+ AALL + +TG GQK++ +LL + VS+L YL G+ RWG+ H VP
Sbjct: 182 AKDAITAALLARVRTGVGQKVETSLLESTVSILSMSAYAYLLGGVVAGRWGSEHQWNVPW 241
Query: 450 QVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
+ F+T++GYV + + S++Q++ +C + L DPR+ T A
Sbjct: 242 KAFETTDGYVVVASSSEEQWRKICVGIERPDLLEDPRFTTMA 283
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 70/149 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L DPR+ T A R +RE+L ++ TT +W+ V A VN
Sbjct: 264 ICVGIERPDLLEDPRFTTMADRAAHREILYALLDEVFATHTTHDWVARLDAVGAAAAPVN 323
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I QVFAD + +++ + H G I VG A T ++ PPP LG+HT VL
Sbjct: 324 TIDQVFADPQVLARDMLQSVEHPTLGPIAQVGHAQKLHGTPHQITLPPPLLGQHTREVLT 383
Query: 121 DLLNYDETTIAKLKEKKILGLIERLTKNA 149
DL Y I +L ++G+ + A
Sbjct: 384 DLGGYTPDEIDELARDGVVGVADHPAATA 412
>gi|221069553|ref|ZP_03545658.1| L-carnitine dehydratase/bile acid-inducible protein F [Comamonas
testosteroni KF-1]
gi|220714576|gb|EED69944.1| L-carnitine dehydratase/bile acid-inducible protein F [Comamonas
testosteroni KF-1]
Length = 426
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 130/284 (45%), Positives = 184/284 (64%), Gaps = 10/284 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE-----LS 271
L+++R+LDL+R++AGP+CT LAD+GA+VIK+E+P GD+ R WGPPF + + +
Sbjct: 16 LNHLRVLDLSRVLAGPWCTQNLADMGADVIKIEKPGEGDDTRHWGPPFFADAQGDASAHA 75
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NRNK+SV VD TPEGQ II++LAK D++VENF G L R L Y L+ +N
Sbjct: 76 CYFAACNRNKRSVTVDMATPEGQSIIRELAKDSDIVVENFKTGGLQRYGLDYTSLAALNP 135
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+LIYCSVTGFG GPY R GYD++ ++ GL+ ITG P P +VG+A IDL TG
Sbjct: 136 RLIYCSVTGFGHTGPYAPRAGYDLLVQAMSGLMSITGRADSDPGSGPLRVGVAVIDLFTG 195
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA A+++AL ++ TG+GQ ID LL +++L N G +LN G R G +H +VV
Sbjct: 196 MYATSAILSALEARHHTGRGQHIDMALLDVAMAVLANQGTGFLNTGSIPGRQGNTHPSVV 255
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
P+Q F T++G + + G+D Q+ C+ + D R+ T A
Sbjct: 256 PYQDFPTADGNMLLAIGNDGQFARFCEAAGVV-WHQDARFTTNA 298
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 15/139 (10%)
Query: 13 DPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEHIQ 72
D R+ T A RV +R + + T ++T +W+ + + + P +N+I Q F D H+Q
Sbjct: 291 DARFTTNAGRVIHRGEMVDMMSELTRSRSTADWIALLEARAVPCGPINNIRQAFEDPHVQ 350
Query: 73 DIKLVKEISHEKYGD------------IKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
L I+ ++Y D I P + S T +R PPALG+HT+ VL+
Sbjct: 351 ARGL--RITQQRYPDGQLPEGECINQVITTASP-LRLSDTPATLRYAPPALGQHTEEVLR 407
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ L D + L++K++L
Sbjct: 408 ERLQLDAAQLQALRDKQVL 426
>gi|409438714|ref|ZP_11265777.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhizobium
mesoamericanum STM3625]
gi|408749374|emb|CCM76953.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhizobium
mesoamericanum STM3625]
Length = 400
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 120/278 (43%), Positives = 176/278 (63%), Gaps = 4/278 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE----LS 271
PLS +R+++L R++AGP+ +LADLGA+VIKVE P GD+ R WGPPF+ + +
Sbjct: 10 PLSGIRVIELARVLAGPWAGQMLADLGADVIKVENPDGGDDTRHWGPPFVEGADGENLSA 69
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NR K+S+ D K E Q++++ L DV++ENF G L + L Y+ L +IN
Sbjct: 70 AYYHAANRGKRSITADLKRKEDQELVRRLVATADVVIENFKLGGLVKYGLDYESLKKINP 129
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+L+YCS+TGFG GPY GYD I + G + ITG PDG P K G+A D+ TG+YA
Sbjct: 130 RLVYCSITGFGQTGPYASLAGYDYIVQGMSGFMSITGEPDGQPMKAGVAIADVFTGIYAV 189
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A+ AAL+H +TG+GQ +D LL Q ++L N NYL +G R G +H N+ P++V
Sbjct: 190 AAIEAALIHAQRTGEGQLVDMALLDVQSAVLANQNMNYLVSGRAPTRLGNAHPNISPYEV 249
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
++GY+ + G+D Q++ +C ++ L+ A DPRY T
Sbjct: 250 VPAADGYLILAVGNDGQFRRLCAILGLEGTADDPRYAT 287
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ L+ A DPRY T RV NR+ + + + +T++ + L + + P +N
Sbjct: 270 LCAILGLEGTADDPRYATNKARVANRDEVRRLVSTETLKWQKADLLKACEADAVPAGAIN 329
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I ++FAD IQ L ++S + I V V S T P P LGEH + VL
Sbjct: 330 TIEEMFADPQIQARGLRVDLSDARGTVIPGVRTPVVLSRTPLRYERPSPRLGEHQEEVLA 389
Query: 121 DL 122
+L
Sbjct: 390 EL 391
>gi|389879971|ref|YP_006382201.1| L-carnitine dehydratase/bile acid-inducible protein F [Tistrella
mobilis KA081020-065]
gi|388531361|gb|AFK56556.1| L-carnitine dehydratase/bile acid-inducible protein F [Tistrella
mobilis KA081020-065]
Length = 412
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 128/293 (43%), Positives = 182/293 (62%), Gaps = 8/293 (2%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELST---- 272
LS++R+LDL+R++AGP+ + +L DLGAEV+K+E+P GD+ R WGPP+ + S
Sbjct: 10 LSHIRVLDLSRVLAGPWASQILGDLGAEVLKIERPGAGDDTRGWGPPYAEAADGSAREAA 69
Query: 273 YFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQ 332
YF NRNK SV +D T EG +I+ LA + DV++ENF G L + L + L +N +
Sbjct: 70 YFLTTNRNKSSVAIDMGTEEGATLIRRLAAESDVVIENFKVGGLKKYGLDQESLRALNPR 129
Query: 333 LIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATGL 388
LIYCS+TGFG GPY R GYD + ++GGL+ +TG PD G P KVG+A +D+ TGL
Sbjct: 130 LIYCSITGFGQTGPYAPRAGYDFMIQAMGGLMSVTGEPDEVPGGGPVKVGVALVDVMTGL 189
Query: 389 YAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVP 448
YA V+AAL H+ +TG GQ ID LL V+ L N NYL +G R G +H N+VP
Sbjct: 190 YATIGVLAALAHRERTGAGQYIDLALLDVSVATLANQAMNYLVSGKAPGRMGNAHPNIVP 249
Query: 449 HQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
+Q F T +G++ + G+D+Q++ DPR+ T A +A + L+
Sbjct: 250 YQAFATQDGHLVLAIGNDEQFRRFAAEAGHPDWGTDPRFATNAQRVANRAALV 302
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%)
Query: 13 DPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEHIQ 72
DPR+ T A RV NR L + +TT++W+ + + P +N++ +VFAD +Q
Sbjct: 285 DPRFATNAQRVANRAALVPLVAGAVATRTTDDWIAALESKAVPCGPINTLDRVFADPQVQ 344
Query: 73 DIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETTIAK 132
L ++I+H G + V + S T + P LG TD L LL D +A
Sbjct: 345 ARGLARQIAHPALGSVPTVANPLNLSATPVDYARAAPRLGVDTDETLGRLLGLDVAALAD 404
Query: 133 LKEKKILG 140
L+++ ++G
Sbjct: 405 LRKRGVIG 412
>gi|332559929|ref|ZP_08414251.1| putative acyl-CoA transferase/carnitine dehydratase [Rhodobacter
sphaeroides WS8N]
gi|332277641|gb|EGJ22956.1| putative acyl-CoA transferase/carnitine dehydratase [Rhodobacter
sphaeroides WS8N]
Length = 381
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 122/289 (42%), Positives = 182/289 (62%), Gaps = 3/289 (1%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN--NTELS 271
S PL+ +R+++L RI+AGP+ +LADLGA+V+KVE P GD+ R+WGPPF+ +
Sbjct: 2 SAPLAGIRVVELARILAGPWAGQVLADLGADVVKVEAP-EGDDTRRWGPPFIEREGDRSA 60
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NR K+SV DF+T EGQ+ ++ L DV++ENF G L + L + L ++N
Sbjct: 61 AYFHAANRGKRSVTADFRTSEGQETVRRLVADADVVIENFKVGGLAKYGLDWPSLQKVNP 120
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+L+YCS+TGFG GPY R GYD I + GL+ +TG +G P KVG+A D+ TG+YA
Sbjct: 121 RLVYCSITGFGQDGPYAHRAGYDFIIQGMAGLMSVTGAAEGQPQKVGVAVTDIFTGIYAA 180
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A++AAL + TG GQ++D L+ ++ N NYL G+ ++ G H N+ P+ V
Sbjct: 181 TAILAALHQRAGTGHGQQVDMALMDVAAGIMANQAMNYLATGVAPRKMGNEHPNLAPYAV 240
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHL 500
F ++G++ I TG+D QY+ +C ++ L LA P +LT A +A + L
Sbjct: 241 FDCADGWIIIATGNDAQYRRLCTLLGLPGLATAPAFLTNADRVANRAEL 289
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ L LA P +LT A RV NR L + + A T E L + P +N
Sbjct: 261 LCTLLGLPGLATAPAFLTNADRVANRAELTRALTAVTSGWRKAELLAACEAEGVPAGPIN 320
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+++VFAD I+ + +I+ G + V +S + + P P LGEH D VL
Sbjct: 321 DMAEVFADPQIRHRGM--QIAP---GGVPGVRSPFRFSEAELALGRPAPRLGEHQDEVLG 375
Query: 121 DLLNYD 126
+ + D
Sbjct: 376 EPADQD 381
>gi|311106642|ref|YP_003979495.1| CoA-transferase [Achromobacter xylosoxidans A8]
gi|310761331|gb|ADP16780.1| CoA-transferase family III family protein 27 [Achromobacter
xylosoxidans A8]
Length = 408
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 137/281 (48%), Positives = 181/281 (64%), Gaps = 9/281 (3%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNT-----EL 270
PLS++R+LDLTR++AGP+CT LADLGA+V K+E+P GD+ R WGPP++ + E
Sbjct: 5 PLSHIRVLDLTRVLAGPWCTQNLADLGADVTKIERPGAGDDTRGWGPPWMPDVDGGPRED 64
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
S Y+ NR KKSV VD T EGQ II+ LA DVLVEN+ G L R LGY+ L N
Sbjct: 65 SGYYASTNRGKKSVTVDISTAEGQDIIRRLAADSDVLVENYKVGTLARYGLGYEDLCTDN 124
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDG----PPCKVGIASIDLAT 386
L+YCS+TGFG GPY+ RPGYD I +GGL+ ITG DG P KVG+A D+ T
Sbjct: 125 PALVYCSITGFGQTGPYRHRPGYDFIFQGMGGLMSITGEADGLPGAGPQKVGVAVADITT 184
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANV 446
G+YA A+ AAL + ++G+GQ ID LL ++ N NYL +G +R+G +HAN
Sbjct: 185 GMYASLAIAAALAWRERSGQGQHIDMALLDCVLAFGSNPAVNYLVSGKTPRRYGNAHANA 244
Query: 447 VPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
VP+QVF T +G + + G+D Q+ C+ + LA DPRY
Sbjct: 245 VPYQVFDTQDGRLIVAVGNDSQFAAYCQEIQRPDLAQDPRY 285
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C+ + LA DPRY + R+ +R+ L + T+ W +G P +N+
Sbjct: 271 CQEIQRPDLAQDPRYAKVSGRLTHRDTLLPLLAEIMATDTSAAWQSRLEGAGVPCGPINT 330
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
++ F D + L ++ G + + +S T + R PP LGEHT VL
Sbjct: 331 FAETFTDPQVMHRGLRVDLPLSTGGTCPSIASPMRFSATPLDHRAGPPVLGEHTREVLAQ 390
Query: 122 LLNYDETTIAKLKEKKIL 139
L E+T+ +L ++
Sbjct: 391 RLGLSESTLTELHAAGVI 408
>gi|56418981|ref|YP_146299.1| hypothetical protein GK0446 [Geobacillus kaustophilus HTA426]
gi|56378823|dbj|BAD74731.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
Length = 394
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 133/273 (48%), Positives = 181/273 (66%), Gaps = 2/273 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L VR+LDL+R++AGP+ TM+L DLGA+VIKVE P D+ R WGPPF N +S Y+T
Sbjct: 5 LDGVRVLDLSRVLAGPYATMILGDLGADVIKVEAPGGSDDTRFWGPPFQNG--MSAYYTA 62
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
VNRNK+S+ V+ K+ EGQ+ I+ LA+ DVL+ NF G +++ LGY+ LS +N +LIYC
Sbjct: 63 VNRNKRSITVNLKSAEGQETIRRLAETADVLIHNFKTGTMEQWELGYESLSRLNPRLIYC 122
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S+TGFG GP GYD I ++ G + I G D P KVG+A D+ TGLYA A+ A
Sbjct: 123 SITGFGETGPLAPLAGYDYIIQAMSGWMSINGTADTGPLKVGVAVTDVFTGLYAAIAIEA 182
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
ALL + KTG+GQKID L VS L+NV ANYL +G K G H N+VP+ + S+
Sbjct: 183 ALLAREKTGRGQKIDLALFDCAVSALVNVAANYLLSGDVPKPLGNEHPNIVPYSTYMASD 242
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
G + I G+D+Q+Q +C +++ L DPR+ T
Sbjct: 243 GPIVIAVGNDRQFQALCSLLSDHSLGTDPRFQT 275
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 51/118 (43%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C +++ L DPR+ T RV +RE L + + + +T EW + P V
Sbjct: 258 LCSLLSDHSLGTDPRFQTNPGRVAHREELNRRLNEEIKRRTRAEWQRLLAEKGIPCGPVQ 317
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
++ ++F ++ + H G + +V + S T R PPP GEH V
Sbjct: 318 TLDELFRHPQTAAREMTVTVHHPIVGPLTLVASPLKLSDTAVSYRLPPPLAGEHNREV 375
>gi|449283172|gb|EMC89864.1| hypothetical protein A306_01097 [Columba livia]
Length = 218
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 125/218 (57%), Positives = 160/218 (73%), Gaps = 2/218 (0%)
Query: 236 MLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTCVNRNKKSVCVDFKTPEGQQ 295
M L DLGAEVIKVE+P GD+ R WGPPF TE S YF VNRNKKS+ ++ K +G +
Sbjct: 1 MNLGDLGAEVIKVERPGAGDDTRAWGPPFAG-TE-SVYFLSVNRNKKSIAINMKDSKGAK 58
Query: 296 IIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDI 355
+I+++ DV VEN+VPGKL + LGY+ + +I L+YCS+TG+G GP R GYD
Sbjct: 59 LIREVGFVSDVFVENYVPGKLAEMGLGYQDIKKIAPHLVYCSITGYGQTGPMVQRGGYDS 118
Query: 356 IAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLL 415
IAA++ GL+HITGH DG P + G+A DLATGLY +GA+MA LL KYKTGKG IDCNLL
Sbjct: 119 IAAAVSGLMHITGHEDGEPVRAGVAMTDLATGLYTYGAIMAGLLQKYKTGKGLHIDCNLL 178
Query: 416 STQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFK 453
S+QV+ L +V ANYLN +E KRWGT+H ++VP+QV +
Sbjct: 179 SSQVACLTHVAANYLNCKMEAKRWGTAHGSIVPYQVSR 216
>gi|357383428|ref|YP_004898152.1| CAIB/BAIF family protein [Pelagibacterium halotolerans B2]
gi|351592065|gb|AEQ50402.1| CAIB/BAIF family protein [Pelagibacterium halotolerans B2]
Length = 382
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 130/285 (45%), Positives = 179/285 (62%), Gaps = 8/285 (2%)
Query: 212 NPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL------ 265
P PL+ +R+++L RI+AGP+ LADLGAEVIKVE P GD+ R+WGPPF+
Sbjct: 2 QPESPLAGLRVVELARILAGPWLGQTLADLGAEVIKVESP-EGDDTRRWGPPFIERDDGR 60
Query: 266 -NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYK 324
E++ YF NR+K+S+ DF+ P + +K L DVLVENF G L R L Y
Sbjct: 61 GGTEEVAAYFHATNRSKRSMICDFRDPADLERLKALIADADVLVENFKLGGLARYGLDYP 120
Query: 325 HLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDL 384
L+ IN +L+Y S+TGFG GP +PGYD + + G++ +TG P+G P KVG+A ID+
Sbjct: 121 TLAAINPRLVYVSITGFGQTGPRASQPGYDFLIQGMSGIMDLTGDPEGEPQKVGVAWIDV 180
Query: 385 ATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHA 444
TGLY V AAL + ++G GQ ID +LL V++L N NYL +G R G +H
Sbjct: 181 FTGLYGVIGVQAALAERQRSGSGQHIDLSLLDVGVAVLANQAMNYLVSGKSPSRMGNAHP 240
Query: 445 NVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
N+VP+QVF +G+V I G+D+Q+Q +C V+ L LA DPR +T
Sbjct: 241 NIVPYQVFPVVDGHVIIACGNDRQFQSLCSVLKLVTLATDPRAMT 285
>gi|300789101|ref|YP_003769392.1| acyl-CoA transferase/carnitine dehydratase [Amycolatopsis
mediterranei U32]
gi|384152581|ref|YP_005535397.1| acyl-CoA transferase/carnitine dehydratase [Amycolatopsis
mediterranei S699]
gi|399540981|ref|YP_006553643.1| acyl-CoA transferase/carnitine dehydratase [Amycolatopsis
mediterranei S699]
gi|299798615|gb|ADJ48990.1| acyl-CoA transferase/carnitine dehydratase [Amycolatopsis
mediterranei U32]
gi|340530735|gb|AEK45940.1| acyl-CoA transferase/carnitine dehydratase [Amycolatopsis
mediterranei S699]
gi|398321751|gb|AFO80698.1| acyl-CoA transferase/carnitine dehydratase [Amycolatopsis
mediterranei S699]
Length = 393
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 125/278 (44%), Positives = 177/278 (63%), Gaps = 6/278 (2%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL++VR+LDL+RI+AGP+ +LADLGA+VIKVE+P TGD+ R WGPPFL + S YF
Sbjct: 4 PLTHVRVLDLSRIMAGPWAGQVLADLGADVIKVERPGTGDDTRSWGPPFLGSE--SGYFL 61
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
NR K+SV D T EG+ +++ LA D+++ENF G LDR LGY+ L + ++Y
Sbjct: 62 SANRGKRSVTADIATIEGRDLVRRLAATSDIVLENFKAGTLDRYGLGYEDLRAVKPDIVY 121
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVGIASIDLATGLYAH 391
CS+TGFG GP +D+ YD + ++GGL+ +TG PD G P KVG+ +DL TG+YA
Sbjct: 122 CSITGFGQDGPRRDQAAYDFMIQAMGGLMSVTGEPDDRPGGGPQKVGVPIVDLFTGMYAA 181
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
V+AAL H+ +TG+G ID +L QV +L N N+L +G R G H N+ P V
Sbjct: 182 TGVLAALAHRDRTGEGDHIDLAMLDVQVGVLANQAMNHLISGEVPVRRGNRHPNIQPQDV 241
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+ +G++ + G+D Q+ C+ + LA DP Y T
Sbjct: 242 YPCRDGHLVVAVGNDAQFTRFCEALGFPELAADPDYAT 279
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 51/122 (41%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+ + LA DP Y T RV N E L I WL S P +N
Sbjct: 262 FCEALGFPELAADPDYATNEARVRNVEALTSRIRRTLAGGELSHWLRELGVRSVPCGPIN 321
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ ADE ++ +V+++ H G + V + + + PP LG+H D + +
Sbjct: 322 TVPMALADEQVRHRGMVRQLPHPAEGAVPQVVSPLRFRNAALDFAAAPPLLGQHDDEIAR 381
Query: 121 DL 122
+L
Sbjct: 382 EL 383
>gi|375007352|ref|YP_004980984.1| acyl-CoA transferase [Geobacillus thermoleovorans CCB_US3_UF5]
gi|359286200|gb|AEV17884.1| acyl-CoA transferase [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 394
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 133/273 (48%), Positives = 181/273 (66%), Gaps = 2/273 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L VR+LDL+R++AGP+ TM+L DLGA+VIKVE P D+ R WGPPF N +S Y+T
Sbjct: 5 LDGVRVLDLSRVLAGPYATMILGDLGADVIKVEAPGGSDDTRFWGPPFQNG--MSAYYTA 62
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
VNRNK+S+ V+ K+ EGQ+ I+ LA+ DVL+ NF G +++ LGY+ LS +N +LIYC
Sbjct: 63 VNRNKRSITVNLKSAEGQETIRRLAETADVLIHNFKTGTMEQWELGYESLSRLNPRLIYC 122
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S+TGFG GP GYD I ++ G + I G D P KVG+A D+ TGLYA A+ A
Sbjct: 123 SITGFGETGPLAPLAGYDYIIQAMSGWMSINGTADTGPLKVGVAVTDVFTGLYAAIAIEA 182
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
ALL + KTG+GQKID L VS L+NV ANYL +G K G H N+VP+ + S+
Sbjct: 183 ALLAREKTGRGQKIDLALFDCAVSALVNVAANYLLSGDVPKPLGNEHPNIVPYSTYMASD 242
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
G + I G+D+Q+Q +C +++ L DPR+ T
Sbjct: 243 GPIVIAVGNDRQFQALCSLLSDHSLGTDPRFQT 275
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 51/118 (43%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C +++ L DPR+ T RV +RE L + + + +T EW + P V
Sbjct: 258 LCSLLSDHSLGTDPRFQTNPGRVAHREELNRRLNEEIKRRTRAEWQRLLAEKGIPCGPVQ 317
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
++ ++F ++ + H G + +V + S T R PPP GEH V
Sbjct: 318 TLDELFRHPQTAAREMTVTVHHPIVGPLTLVASPLKLSDTPVSYRLPPPLAGEHNREV 375
>gi|261418774|ref|YP_003252456.1| L-carnitine dehydratase/bile acid-inducible protein F [Geobacillus
sp. Y412MC61]
gi|297531263|ref|YP_003672538.1| L-carnitine dehydratase/bile acid-inducible protein F [Geobacillus
sp. C56-T3]
gi|319765591|ref|YP_004131092.1| L-carnitine dehydratase/bile acid-inducible protein F [Geobacillus
sp. Y412MC52]
gi|261375231|gb|ACX77974.1| L-carnitine dehydratase/bile acid-inducible protein F [Geobacillus
sp. Y412MC61]
gi|297254515|gb|ADI27961.1| L-carnitine dehydratase/bile acid-inducible protein F [Geobacillus
sp. C56-T3]
gi|317110457|gb|ADU92949.1| L-carnitine dehydratase/bile acid-inducible protein F [Geobacillus
sp. Y412MC52]
Length = 394
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 133/273 (48%), Positives = 181/273 (66%), Gaps = 2/273 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L VR+LDL+R++AGP+ TM+L DLGA+VIKVE P D+ R WGPPF N +S Y+T
Sbjct: 5 LDGVRVLDLSRVLAGPYATMILGDLGADVIKVEAPGGSDDTRFWGPPFQNG--MSAYYTA 62
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
VNRNK+S+ V+ K+ EGQ+ I+ LA+ DVL+ NF G +++ LGY+ LS +N +LIYC
Sbjct: 63 VNRNKRSITVNLKSAEGQETIRRLAETADVLIHNFKTGTMEQWELGYESLSRLNPRLIYC 122
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S+TGFG GP GYD I ++ G + I G D P KVG+A D+ TGLYA A+ A
Sbjct: 123 SITGFGETGPLAPLAGYDYIIQAMSGWMSINGTADTGPLKVGVAVTDVFTGLYAAIAIEA 182
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
ALL + KTG+GQKID L VS L+NV ANYL +G K G H N+VP+ + S+
Sbjct: 183 ALLAREKTGRGQKIDLALFDCAVSALVNVAANYLLSGDVPKPLGNEHPNIVPYSTYMASD 242
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
G + I G+D+Q+Q +C +++ L DPR+ T
Sbjct: 243 GPIVIAVGNDRQFQALCSLLSDHSLGTDPRFQT 275
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 51/118 (43%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C +++ L DPR+ T RV +RE L + + + +T EW + P V
Sbjct: 258 LCSLLSDHSLGTDPRFQTNPGRVAHREELNRRLNEEIKRRTRAEWQRLLAEKGIPCGPVQ 317
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
++ ++F ++ + H G + +V + S T R PPP GEH V
Sbjct: 318 TLDELFRHPQTAAREMTVTVHHPIVGPLTLVASPLKLSDTAVSYRLPPPLAGEHNGEV 375
>gi|381191390|ref|ZP_09898900.1| CAIB/BAIF family protein [Thermus sp. RL]
gi|380450750|gb|EIA38364.1| CAIB/BAIF family protein [Thermus sp. RL]
Length = 407
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 123/267 (46%), Positives = 174/267 (65%), Gaps = 3/267 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PLS +++LDL+R++AGP CTM+LADLGAEV KVE P GDE R WGPPF+ S YF
Sbjct: 3 PLSGLKVLDLSRVLAGPLCTMILADLGAEVTKVEPP-WGDETRGWGPPFVQGE--SAYFL 59
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNR K+S+ +D K EGQ++++ LA++ DVLVENF G L R L Y+ L +N +LIY
Sbjct: 60 AVNRGKRSLALDLKAKEGQEVVRRLAQKADVLVENFKTGDLRRFGLDYESLKPLNPRLIY 119
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
S+TGFG GP PGYD G++ +TG P+GPP KVG+A ID+ TG+ AV+
Sbjct: 120 LSITGFGHTGPRAKEPGYDAALQGYTGIMSVTGEPEGPPMKVGVAWIDVMTGMMGAVAVL 179
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
+AL + ++G GQ ID +L + L N+G +YL G +R G +HA +VP+ F
Sbjct: 180 SALYEREQSGLGQHIDLSLFDVGLFALANLGESYLLTGRPPRRLGNAHAQIVPYGAFPAE 239
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLA 482
+G++ + G+D+Q+ +C+ + L LA
Sbjct: 240 DGWLVLAVGNDEQFVRLCQAVGLPWLA 266
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 64/156 (41%), Gaps = 11/156 (7%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + L LA R+ T A RV +RE + + + + WL + V P A VN
Sbjct: 256 LCQAVGLPWLA--ERFPTNAERVAHREAVVEALSQTLQARPRAYWLEKLKEVGVPAAPVN 313
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIK-IVGPAVAYSLTQPEVRTPPPALGEHTDYVL 119
+ + F D + V + H G + + P S T PPP LGEHT VL
Sbjct: 314 DLKEAFQDPQAEARGAVWTLPHPLLGTLPTLANPLRFLSRTPAGPGLPPPLLGEHTREVL 373
Query: 120 KDLLNYDETTIAKLKEKKILGLIERLTKNADPVCTR 155
+ Y +A L ++ I K A P R
Sbjct: 374 LE-AGYTSEAVADLIQRGI-------AKEAPPASQR 401
>gi|423018424|ref|ZP_17009145.1| acyl-CoA transferase/carnitine dehydratase [Achromobacter
xylosoxidans AXX-A]
gi|338778455|gb|EGP42928.1| acyl-CoA transferase/carnitine dehydratase [Achromobacter
xylosoxidans AXX-A]
Length = 406
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 125/282 (44%), Positives = 181/282 (64%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LSN+++LDL+R++AGP+ + +LADLGA+VIKVE+P GD+ R WGPPFL +T
Sbjct: 5 LSNLKVLDLSRVLAGPWASQILADLGADVIKVERPGQGDDTRSWGPPFLKDEQGRDTADG 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NR K+S+ +D +T EGQ ++K L + DV++EN+ G L RL L Y LS IN
Sbjct: 65 AYFVATNRGKRSITLDLQTAEGQALVKQLCRDADVVLENYKVGTLARLGLDYASLSAINP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCSVTGFG GP P YD + ++GGL+ +TG P G P KVG+ +DL TG
Sbjct: 125 RLVYCSVTGFGQTGPRAAEPAYDFLIQAMGGLMSVTGERDDKPGGGPQKVGVPIVDLTTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA ++AALL + +TG+G+ ID +L QV +L N N+L G +R GT+H N+
Sbjct: 185 VYAALGIVAALLRRAQTGQGEYIDVAMLDVQVGLLANQAMNFLLGGRVPRRTGTAHPNIQ 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P + F ++G + I G+D Q+ +C+ + LA D RY++
Sbjct: 245 PQRTFACADGDIVIVVGNDAQFATLCEALGQPDLARDARYVS 286
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 69/139 (49%), Gaps = 1/139 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + LA D RY++ + RV+N + L ++A + + WL + + P +N
Sbjct: 269 LCEALGQPDLARDARYVSNSQRVKNLDTLDPLLDAIFIAEPRAHWLDLLKRAGVPAGSIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ +VF D + +++ + H G++ V + + + V P LG+HTD VL
Sbjct: 329 TVPEVFEDPQVLHRGMLRRLPHPAAGEVPQVMNPLRFGQSTLRVERAPALLGQHTDEVLA 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ L I L+++KI+
Sbjct: 389 E-LGLSAAQIQDLRDRKII 406
>gi|189023151|ref|YP_001932892.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella
abortus S19]
gi|260545134|ref|ZP_05820955.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella
abortus NCTC 8038]
gi|376270420|ref|YP_005113465.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella
abortus A13334]
gi|189021725|gb|ACD74446.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella
abortus S19]
gi|260098405|gb|EEW82279.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella
abortus NCTC 8038]
gi|363401592|gb|AEW18561.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella
abortus A13334]
Length = 422
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 125/281 (44%), Positives = 185/281 (65%), Gaps = 3/281 (1%)
Query: 212 NPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELS 271
N +LPL+ ++LDL+R++AGP+ TM LAD+GAEV K+E GD+ R W P N E S
Sbjct: 16 NAALPLAGTKVLDLSRVLAGPWATMSLADMGAEVWKIENIQGGDDTRAWSVP--NYKEAS 73
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
TYF C NR KKS+ +D K+ EG +II +LAKQ DV+VENF G ++RL + Y+ L +N
Sbjct: 74 TYFLCANRGKKSLALDLKSREGLEIIHELAKQADVVVENFRSGTVERLKIDYESLKALNP 133
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
++YCS++G+G GP RPGYD + + GL+ ITG DG P ++G+A D+ G+ A
Sbjct: 134 GIVYCSISGYGQTGPEAQRPGYDFVVQAESGLMSITGQIDGEPTRIGVAMTDIVAGMVAT 193
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
+V+AAL + TG GQ ID +L ++ LINVG+ +LN G R+G +H VVP+Q+
Sbjct: 194 QSVLAALYQRKTTGLGQYIDVSLYECALNTLINVGSAHLNGGHVPARFGNAHPTVVPYQI 253
Query: 452 FKTSNGYVTIGTGSDKQYQDMC-KVMNLQHLALDPRYLTGA 491
F+ S+G + G+D+Q+ +C ++++L LA D R+ T +
Sbjct: 254 FECSDGAFALAVGNDRQFAILCERIIDLPELAADERFKTAS 294
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%)
Query: 3 KVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSI 62
++++L LA D R+ T + R NR L + + T + W+ + P QV ++
Sbjct: 277 RIIDLPELAADERFKTASGRALNRAALIPPMAERFRTNTRQHWMSACLKMGVPAGQVKTV 336
Query: 63 SQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDL 122
+ F +++ ++V+++ G I +V PA + PP LGE + VL D+
Sbjct: 337 PEAFESPNVKARQVVQKLESAHLGPISLVRPAQGLKAQENAAYKAPPMLGEDSASVLGDV 396
Query: 123 LNYDETTIAKL 133
L D +A L
Sbjct: 397 LGLDGNKLADL 407
>gi|62317902|ref|YP_223755.1| CAIB/BAIF family protein [Brucella abortus bv. 1 str. 9-941]
gi|83269879|ref|YP_419170.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella
melitensis biovar Abortus 2308]
gi|260882010|ref|ZP_05893624.1| acyl-CoA transferase/carnitine dehydratase [Brucella abortus bv. 9
str. C68]
gi|62198095|gb|AAX76394.1| CAIB/BAIF family protein [Brucella abortus bv. 1 str. 9-941]
gi|82940153|emb|CAJ13202.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella
melitensis biovar Abortus 2308]
gi|260871538|gb|EEX78607.1| acyl-CoA transferase/carnitine dehydratase [Brucella abortus bv. 9
str. C68]
Length = 420
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 125/281 (44%), Positives = 185/281 (65%), Gaps = 3/281 (1%)
Query: 212 NPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELS 271
N +LPL+ ++LDL+R++AGP+ TM LAD+GAEV K+E GD+ R W P N E S
Sbjct: 14 NAALPLAGTKVLDLSRVLAGPWATMSLADMGAEVWKIENIQGGDDTRAWSVP--NYKEAS 71
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
TYF C NR KKS+ +D K+ EG +II +LAKQ DV+VENF G ++RL + Y+ L +N
Sbjct: 72 TYFLCANRGKKSLALDLKSREGLEIIHELAKQADVVVENFRSGTVERLKIDYESLKALNP 131
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
++YCS++G+G GP RPGYD + + GL+ ITG DG P ++G+A D+ G+ A
Sbjct: 132 GIVYCSISGYGQTGPEAQRPGYDFVVQAESGLMSITGQIDGEPTRIGVAMTDIVAGMVAT 191
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
+V+AAL + TG GQ ID +L ++ LINVG+ +LN G R+G +H VVP+Q+
Sbjct: 192 QSVLAALYQRKTTGLGQYIDVSLYECALNTLINVGSAHLNGGHVPARFGNAHPTVVPYQI 251
Query: 452 FKTSNGYVTIGTGSDKQYQDMC-KVMNLQHLALDPRYLTGA 491
F+ S+G + G+D+Q+ +C ++++L LA D R+ T +
Sbjct: 252 FECSDGAFALAVGNDRQFAILCERIIDLPELAADERFKTAS 292
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%)
Query: 3 KVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSI 62
++++L LA D R+ T + R NR L + + T + W+ + P QV ++
Sbjct: 275 RIIDLPELAADERFKTASGRALNRAALIPPMAERFRTNTRQHWMSACLKMGVPAGQVKTV 334
Query: 63 SQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDL 122
+ F +++ ++V+++ G I +V PA + PP LGE + VL D+
Sbjct: 335 PEAFESPNVKARQVVQKLESAHLGPISLVRPAQGLKAQENAAYKAPPMLGEDSASVLGDV 394
Query: 123 LNYDETTIAKL 133
L D +A L
Sbjct: 395 LGLDGNKLADL 405
>gi|424871580|ref|ZP_18295242.1| putative acyl-CoA transferase/carnitine dehydratase [Rhizobium
leguminosarum bv. viciae WSM1455]
gi|393167281|gb|EJC67328.1| putative acyl-CoA transferase/carnitine dehydratase [Rhizobium
leguminosarum bv. viciae WSM1455]
Length = 400
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 119/278 (42%), Positives = 177/278 (63%), Gaps = 4/278 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE----LS 271
PL+ +R+++L R++AGP+ +LADLGA+VIKVE P GD+ R+WGPPF+ + +
Sbjct: 10 PLAGIRVIELARVLAGPWAGQMLADLGADVIKVENPDGGDDTRQWGPPFVEGADGENLSA 69
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NR K+SV D K+ EGQ +++ L DV++ENF G L + L Y L ++N
Sbjct: 70 AYYHAANRGKRSVTADLKSAEGQDLVRSLVSTADVVIENFKLGGLVKYGLDYDSLRKVNP 129
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+L+YCS+TGFG GPY GYD I + G + ITG P G P K G+A D+ TG+YA
Sbjct: 130 KLVYCSITGFGQNGPYASLAGYDYIVQGMSGFMSITGEPGGQPMKAGVAIADIFTGIYAV 189
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A+ AAL+H KTG+GQ +D LL Q ++L N NYL +G R G +H N+ P++V
Sbjct: 190 SAIEAALIHALKTGEGQLVDMALLDVQSAVLANQNMNYLVSGEAPTRLGNAHPNISPYEV 249
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
T++GY+ + G+D Q++ +C ++ L+ +A D R+ T
Sbjct: 250 VPTADGYLILAVGNDGQFRRLCAILGLETIASDERFAT 287
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ L+ +A D R+ T RV NR + + + +T++ + L + + P +N
Sbjct: 270 LCAILGLETIASDERFATNKARVGNRGEVRRLVSTETLKWQKADLLKACEENAVPSGAIN 329
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I ++FA +Q L +++ I V V S T P P LGEH +L
Sbjct: 330 TIEEMFAHPQVQARGLRIDLADAAGTVIPGVRTPVVLSETPLRYIRPSPRLGEHQAEILA 389
Query: 121 DL 122
+L
Sbjct: 390 EL 391
>gi|319762132|ref|YP_004126069.1| l-carnitine dehydratase/bile acid-inducible protein f
[Alicycliphilus denitrificans BC]
gi|317116693|gb|ADU99181.1| L-carnitine dehydratase/bile acid-inducible protein F
[Alicycliphilus denitrificans BC]
Length = 413
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 127/282 (45%), Positives = 180/282 (63%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
L+ +++LDL+R++AGP+CT +LADLGA+V+KVE+P GD+ R WGPPFL + T +
Sbjct: 9 LAGIKVLDLSRVLAGPWCTQMLADLGADVVKVERPAAGDDTRHWGPPFLQDGAGRDTREA 68
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+YFT NRNK+S+ VD PEGQ +++ +A+Q DV+VENF G L R L Y L +N
Sbjct: 69 SYFTACNRNKRSITVDMAHPEGQALLRRMAQQADVVVENFKVGGLTRYGLDYDSLRALNP 128
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TGFG GPY R GYD++ + GL+ ITGH P G P KVG+A ID+ TG
Sbjct: 129 RLVYCSITGFGQTGPYAGRAGYDLMVQAACGLMSITGHADGEPGGGPLKVGVAVIDVFTG 188
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA A++AAL + +G+GQ ID LL +++L N A +L G R G H ++
Sbjct: 189 LYASNAILAALNARNASGEGQHIDMALLDVGMAVLANQAAGFLATGQAPGRAGNIHPSLA 248
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F+T +G V + G+D Q+ C + A D + T
Sbjct: 249 PYQDFQTRDGNVLLAIGNDGQFARFCAAVGHDAWAQDECFAT 290
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 69/143 (48%), Gaps = 6/143 (4%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C + A D + T RV +R L + + +++T EW+ + + + P +N
Sbjct: 273 FCAAVGHDAWAQDECFATNTARVRHRAALLERLAPLMRQRSTAEWIALLEDKAVPCGPIN 332
Query: 61 SISQVFADEHIQD----IKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTD 116
+I+Q F D ++ + L ++ + + + V + S T R+ PPALG+HTD
Sbjct: 333 TIAQAFDDPQVRARGTRVDLPRD-AGDGIATVATVASPMRLSATPVAYRSAPPALGQHTD 391
Query: 117 YVLKDLLNYDETTIAKLKEKKIL 139
+L++ L D IA L+E + +
Sbjct: 392 EILRE-LGLDAPAIAALRESRAV 413
>gi|288961079|ref|YP_003451418.1| caiB/BaiF family protein [Azospirillum sp. B510]
gi|288913387|dbj|BAI74874.1| caiB/BaiF family protein [Azospirillum sp. B510]
Length = 416
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 119/282 (42%), Positives = 186/282 (65%), Gaps = 10/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL------NNTEL 270
L+ +R+LDL+R++AGP+ +L DLGA+V+KVE+ GD+CR+ GPP++ +NTE
Sbjct: 13 LAGIRVLDLSRVVAGPYGAQILGDLGADVVKVERRGEGDDCRRVGPPWMKNADGSDNTEE 72
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
STYF VNRNK+S+ VD+ PEG Q+++DLA Q DV +EN+ PG L++ LGYK L ++N
Sbjct: 73 STYFQSVNRNKRSITVDYARPEGAQLVRDLAAQSDVFIENYRPGTLEKYGLGYKRLRQLN 132
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDG----PPCKVGIASIDLAT 386
+LIYCS+TGFG G Y R GYD + ++ G++ +TG DG P +VGI D+ T
Sbjct: 133 PRLIYCSLTGFGQTGSYAPRSGYDYLVQAMVGVMSVTGMRDGEPGAAPTRVGIPIADIVT 192
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANV 446
GL++ V+ AL H+++TGKGQ +D +L +Q+ +++N + + NAG+ R G H +
Sbjct: 193 GLFSAIGVLGALHHRHETGKGQYVDVSLFDSQLGVMLNTFSAWFNAGVALGRTGNDHPSA 252
Query: 447 VPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYL 488
P+ VF +G++ I T +D+++ + + + A DPR+
Sbjct: 253 APYGVFPVDDGHLLIATFNDREFVRLARALGHPEWADDPRFF 294
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 61/135 (45%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+ + + A DPR+ + RV NRE L + + A +T EW+ I + +N
Sbjct: 278 LARALGHPEWADDPRFFKMSARVANREPLKQAVAAALRGRTKAEWVAILNENTVSCGPIN 337
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ + D H+ + LV E H G ++ V S + P R PP LGEH D VL+
Sbjct: 338 EMGDLELDPHVAERALVIEQQHPVLGIVRTAASPVRLSESPPTYRLAPPLLGEHNDEVLR 397
Query: 121 DLLNYDETTIAKLKE 135
+ L + + LK
Sbjct: 398 EWLGLEPDRVDALKR 412
>gi|398812029|ref|ZP_10570810.1| putative acyl-CoA transferase/carnitine dehydratase [Variovorax sp.
CF313]
gi|398079246|gb|EJL70113.1| putative acyl-CoA transferase/carnitine dehydratase [Variovorax sp.
CF313]
Length = 402
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 131/286 (45%), Positives = 189/286 (66%), Gaps = 3/286 (1%)
Query: 208 LSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN 267
+SS N SLPL+ VR+LDL+RI+AGP+C M+LAD+GAEVIKVE P GD+ R WG +
Sbjct: 1 MSSLNSSLPLAGVRVLDLSRILAGPWCGMVLADMGAEVIKVEHPGRGDDTRDWGL-RVGK 59
Query: 268 TELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLS 327
TE + YF VNRNK+SV +D +TPEGQQ+ +DLAKQCDV+++NF G +D+L LGY+ LS
Sbjct: 60 TE-TAYFNSVNRNKRSVTLDLQTPEGQQLARDLAKQCDVVIQNFKFGGIDKLGLGYEQLS 118
Query: 328 EINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATG 387
+ LIYCS++G+ GP RPGYD++ GL+ + G + PP K G+A++DL TG
Sbjct: 119 KEQPGLIYCSISGYDRTGPEAARPGYDLVVQGEAGLMALNGEANQPPLKFGVAAVDLFTG 178
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+Y+ A++AAL + KTGKG+ ++ L + + G L G + R+G SH ++V
Sbjct: 179 MYSAQAILAALYQREKTGKGRHVEMALFDCGLMITAYYGLEALLMGEDPPRYGNSHPSIV 238
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMC-KVMNLQHLALDPRYLTGAL 492
P+ VF ++G + I G++ Q+ C +V+ LA D R+ T L
Sbjct: 239 PYGVFDAADGPLVITVGNNAQFARFCTEVIERPDLAADERFKTNIL 284
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 61/137 (44%)
Query: 3 KVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSI 62
+V+ LA D R+ T LR NR +L E+ A+ ++ + L P +V +
Sbjct: 266 EVIERPDLAADERFKTNILRSANRAVLLPELHAELAKRQRADLLARLTASGIPCGEVLGL 325
Query: 63 SQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDL 122
+ + D LV H G + ++ P + + VR+ PP LGE T VL+ L
Sbjct: 326 LEALQSKRATDAGLVTTQPHPVAGTVNVLAPPYRFDGERLPVRSAPPTLGEGTHDVLQSL 385
Query: 123 LNYDETTIAKLKEKKIL 139
L + +A LK ++
Sbjct: 386 LGLSDDKLAALKTSGVV 402
>gi|237817445|ref|ZP_04596437.1| CoA-transferase family III protein [Brucella abortus str. 2308 A]
gi|260756186|ref|ZP_05868534.1| acyl-CoA transferase/carnitine dehydratase [Brucella abortus bv. 6
str. 870]
gi|260760445|ref|ZP_05872793.1| acyl-CoA transferase/carnitine dehydratase [Brucella abortus bv. 4
str. 292]
gi|260763686|ref|ZP_05876018.1| acyl-CoA transferase/carnitine dehydratase [Brucella abortus bv. 2
str. 86/8/59]
gi|297249165|ref|ZP_06932866.1| formyl-coenzyme A transferase [Brucella abortus bv. 5 str. B3196]
gi|423168197|ref|ZP_17154899.1| hypothetical protein M17_01886 [Brucella abortus bv. 1 str. NI435a]
gi|423172368|ref|ZP_17159042.1| hypothetical protein M19_02900 [Brucella abortus bv. 1 str. NI474]
gi|423173901|ref|ZP_17160571.1| hypothetical protein M1A_01298 [Brucella abortus bv. 1 str. NI486]
gi|423175777|ref|ZP_17162443.1| hypothetical protein M1E_00039 [Brucella abortus bv. 1 str. NI488]
gi|423181796|ref|ZP_17168436.1| hypothetical protein M1G_02895 [Brucella abortus bv. 1 str. NI010]
gi|423184929|ref|ZP_17171565.1| hypothetical protein M1I_02897 [Brucella abortus bv. 1 str. NI016]
gi|423188082|ref|ZP_17174695.1| hypothetical protein M1K_02899 [Brucella abortus bv. 1 str. NI021]
gi|423190500|ref|ZP_17177109.1| hypothetical protein M1M_02181 [Brucella abortus bv. 1 str. NI259]
gi|18092584|gb|AAL59359.1|AF454951_37 putative CaiB-like protein [Brucella abortus]
gi|237788258|gb|EEP62474.1| CoA-transferase family III protein [Brucella abortus str. 2308 A]
gi|260670763|gb|EEX57703.1| acyl-CoA transferase/carnitine dehydratase [Brucella abortus bv. 4
str. 292]
gi|260674107|gb|EEX60928.1| acyl-CoA transferase/carnitine dehydratase [Brucella abortus bv. 2
str. 86/8/59]
gi|260676294|gb|EEX63115.1| acyl-CoA transferase/carnitine dehydratase [Brucella abortus bv. 6
str. 870]
gi|297173034|gb|EFH32398.1| formyl-coenzyme A transferase [Brucella abortus bv. 5 str. B3196]
gi|374536790|gb|EHR08310.1| hypothetical protein M19_02900 [Brucella abortus bv. 1 str. NI474]
gi|374538690|gb|EHR10197.1| hypothetical protein M17_01886 [Brucella abortus bv. 1 str. NI435a]
gi|374540481|gb|EHR11982.1| hypothetical protein M1A_01298 [Brucella abortus bv. 1 str. NI486]
gi|374546386|gb|EHR17846.1| hypothetical protein M1G_02895 [Brucella abortus bv. 1 str. NI010]
gi|374547229|gb|EHR18688.1| hypothetical protein M1I_02897 [Brucella abortus bv. 1 str. NI016]
gi|374554262|gb|EHR25675.1| hypothetical protein M1K_02899 [Brucella abortus bv. 1 str. NI021]
gi|374556540|gb|EHR27945.1| hypothetical protein M1M_02181 [Brucella abortus bv. 1 str. NI259]
gi|374556751|gb|EHR28152.1| hypothetical protein M1E_00039 [Brucella abortus bv. 1 str. NI488]
Length = 454
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 125/281 (44%), Positives = 185/281 (65%), Gaps = 3/281 (1%)
Query: 212 NPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELS 271
N +LPL+ ++LDL+R++AGP+ TM LAD+GAEV K+E GD+ R W P N E S
Sbjct: 48 NAALPLAGTKVLDLSRVLAGPWATMSLADMGAEVWKIENIQGGDDTRAWSVP--NYKEAS 105
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
TYF C NR KKS+ +D K+ EG +II +LAKQ DV+VENF G ++RL + Y+ L +N
Sbjct: 106 TYFLCANRGKKSLALDLKSREGLEIIHELAKQADVVVENFRSGTVERLKIDYESLKALNP 165
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
++YCS++G+G GP RPGYD + + GL+ ITG DG P ++G+A D+ G+ A
Sbjct: 166 GIVYCSISGYGQTGPEAQRPGYDFVVQAESGLMSITGQIDGEPTRIGVAMTDIVAGMVAT 225
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
+V+AAL + TG GQ ID +L ++ LINVG+ +LN G R+G +H VVP+Q+
Sbjct: 226 QSVLAALYQRKTTGLGQYIDVSLYECALNTLINVGSAHLNGGHVPARFGNAHPTVVPYQI 285
Query: 452 FKTSNGYVTIGTGSDKQYQDMC-KVMNLQHLALDPRYLTGA 491
F+ S+G + G+D+Q+ +C ++++L LA D R+ T +
Sbjct: 286 FECSDGAFALAVGNDRQFAILCERIIDLPELAADERFKTAS 326
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%)
Query: 3 KVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSI 62
++++L LA D R+ T + R NR L + + T + W+ + P QV ++
Sbjct: 309 RIIDLPELAADERFKTASGRALNRAALIPPMAERFRTNTRQHWMSACLKMGVPAGQVKTV 368
Query: 63 SQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDL 122
+ F +++ ++V+++ G I +V PA + PP LGE + VL D+
Sbjct: 369 PEAFESPNVKARQVVQKLESAHLGPISLVRPAQGLKAQENAAYKAPPMLGEDSASVLGDV 428
Query: 123 LNYDETTIAKL 133
L D +A L
Sbjct: 429 LGLDGNKLADL 439
>gi|418407117|ref|ZP_12980435.1| L-carnitine dehydratase [Agrobacterium tumefaciens 5A]
gi|358006261|gb|EHJ98585.1| L-carnitine dehydratase [Agrobacterium tumefaciens 5A]
Length = 400
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 118/278 (42%), Positives = 179/278 (64%), Gaps = 4/278 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE----LS 271
PLS +R+++L R++AGP+ +LAD+GA+VIKVE P GD+ R WGPPF+ + + +
Sbjct: 10 PLSGIRVIELARVLAGPWAGQMLADMGADVIKVENPEGGDDTRAWGPPFVESADGENLSA 69
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NR K+S+ D KT EG ++++ L + DV++ENF G L + L Y+ L +N
Sbjct: 70 AYYHATNRGKRSIVADLKTAEGCELVRRLVRTADVVIENFKRGGLAKYGLDYESLRVLNP 129
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+LIYCS+TGFG GPY D GYD I + G + ITG PDG P K G+A D+ TG+Y+
Sbjct: 130 KLIYCSITGFGQTGPYADFAGYDYIVQGMSGFMSITGEPDGQPMKAGVAVADIFTGIYSV 189
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A+ AAL+H ++G+GQ ID LL Q ++L N NYL +G R G +H N+ P++V
Sbjct: 190 SAIQAALIHAMRSGEGQHIDMALLDVQSAVLANQNMNYLISGNAPVRLGNAHPNISPYEV 249
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
T +G++ + G+D Q++ +CK++ ++ A D R+ T
Sbjct: 250 MPTEDGFLILAVGNDGQFRRLCKILGIEATADDERFAT 287
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK++ ++ A D R+ T RV ++ + + I +T++ + L + + P +N
Sbjct: 270 LCKILGIEATADDERFATNKARVAHKAEVRQIISTETLKWQKRDLLTACEQNAVPAGPIN 329
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI ++FAD +Q L ++ + I V + S T P P LGEH VL
Sbjct: 330 SIEEMFADPQVQARGLRVDLEAQDGTVIPGVRTPIIMSQTPLRYERPSPKLGEHQAQVLA 389
Query: 121 DLLNYDETT 129
+L N + TT
Sbjct: 390 ELENIERTT 398
>gi|407799725|ref|ZP_11146603.1| CAIB/BAIF family protein [Oceaniovalibus guishaninsula JLT2003]
gi|407058202|gb|EKE44160.1| CAIB/BAIF family protein [Oceaniovalibus guishaninsula JLT2003]
Length = 397
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 124/278 (44%), Positives = 177/278 (63%), Gaps = 5/278 (1%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVT-GDECRKWGPPFLNNTE----LS 271
L +R+LDLTRI+AGP CT LL DLGA+V K+E P T GD+ R WGPP + + +S
Sbjct: 5 LDGIRVLDLTRILAGPTCTQLLGDLGADVWKIENPATNGDDTRTWGPPMIAGRDGPLDMS 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NRNK SV VD + EGQ+ I+ LA + DV++ENF PG L + L + + +
Sbjct: 65 AYFVAANRNKYSVAVDLASAEGQETIRALAAKADVVIENFKPGGLAKYGLDAETMLRRHP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
LIYCS++G+G GP +++PGYD++A GG++ +TG PDG P KVG+ D+ G+YA
Sbjct: 125 GLIYCSISGYGQTGPNREKPGYDLMAQGYGGIMSLTGEPDGAPMKVGVGVADIVCGMYAC 184
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
++AAL H+ +TG+GQ +D L+ TQ++ L+N NYL +G R G H N+VP+ V
Sbjct: 185 TGILAALRHRDRTGEGQHVDVGLVDTQMAWLVNEATNYLESGELPVRRGNGHPNIVPYDV 244
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
F TS+G+V + G+D Q+ + L L D R+ T
Sbjct: 245 FATSDGHVIVAVGNDLQFARFSDFLGLPDLPGDARFAT 282
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 51/122 (41%), Gaps = 2/122 (1%)
Query: 5 MNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQ 64
+ L L D R+ T R +NR L I ++TT E + + P VN I Q
Sbjct: 269 LGLPDLPGDARFATNPARAQNRADLYDRIVPAIRDRTTGEVIAGLERRKVPVGPVNDIGQ 328
Query: 65 VFADEH--IQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDL 122
+ +++ + ++ G + ++G + S T R P A G TD +L+ +
Sbjct: 329 ALGSDQARAREMTVRMDVPGAARGYVTMLGNPLKLSATPVSYRLAPRAFGADTDEILQTV 388
Query: 123 LN 124
L
Sbjct: 389 LG 390
>gi|254515689|ref|ZP_05127749.1| L-carnitine dehydrogenase [gamma proteobacterium NOR5-3]
gi|219675411|gb|EED31777.1| L-carnitine dehydrogenase [gamma proteobacterium NOR5-3]
Length = 402
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 125/294 (42%), Positives = 182/294 (61%), Gaps = 9/294 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE-----LS 271
L +R+LDL+R++AGP+ + LADLGA V+K+E+P +GD+ R WGPP+L+N+E S
Sbjct: 4 LDGLRVLDLSRVLAGPWASQTLADLGANVLKIERPGSGDDTRGWGPPWLDNSEGEPGSES 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF C NR K+SVC+D ++PEGQQ ++D+A DVL+ENF G R L Y L N
Sbjct: 64 AYFLCTNRGKRSVCIDIQSPEGQQRLRDIAATADVLIENFKVGDAARYGLDYPGLRRENP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPC----KVGIASIDLATG 387
+LIYCS+TGFG GP RPGYD + ++GGL+ +TG DG P KVG+A D+ TG
Sbjct: 124 RLIYCSITGFGQTGPLASRPGYDFLVQAMGGLMSVTGEADGRPGAGPQKVGVALTDIMTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA+ ++AAL + ++G GQ++D LL + L N +N+L G+ R G +H N+V
Sbjct: 184 LYANIGILAALAERERSGLGQQVDLALLDVTAATLANQASNFLVGGLTPTRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
P+Q F + + G+D Q+ + ++ A DPR+ A +A L+
Sbjct: 244 PYQSFAARDREFIVAVGNDAQFARLAVLLERPAWATDPRFEKNAARVAHRDTLV 297
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 53/111 (47%)
Query: 11 ALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEH 70
A DPR+ A RV +R+ L + + WL + + P +N+I++ ++
Sbjct: 278 ATDPRFEKNAARVAHRDTLVPLLAECFRTRDAAHWLALLETAGIPAGPINTIAEALSEPQ 337
Query: 71 IQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
+ ++ ++ H ++K+VG + S T + PPP LGEH ++ D
Sbjct: 338 LAARDMIVDLPHPDNAELKVVGSPIKLSRTPVSYQRPPPRLGEHDADLIDD 388
>gi|423013944|ref|ZP_17004665.1| CoA-transferase family III family protein 22 [Achromobacter
xylosoxidans AXX-A]
gi|338782875|gb|EGP47244.1| CoA-transferase family III family protein 22 [Achromobacter
xylosoxidans AXX-A]
Length = 401
Score = 267 bits (682), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 125/278 (44%), Positives = 178/278 (64%), Gaps = 5/278 (1%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L VRILDL+RI+AGP T LL DLGA+V+KVE+P GD+ RKWGPP++ T+ S
Sbjct: 9 LDGVRILDLSRILAGPGATQLLGDLGADVVKVEKPGEGDDTRKWGPPYIVGKDGRETDES 68
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+S+ +D + +G+ + L + DVLVEN+ G L R L Y L E
Sbjct: 69 AYYLSANRNKRSIAIDIASDDGRARLHRLLARADVLVENYKVGGLARHGLDYAALRERYP 128
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+L+YCSVTGFG GPY R GYD + +GG++ +TG DG P KVG+ D+ TG+YA
Sbjct: 129 RLVYCSVTGFGQTGPYATRAGYDFLIQGMGGIMSLTGEADGTPMKVGVGIADVMTGMYAA 188
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
++AAL H+ TG+GQ ID +LL +Q++ L+N G NYL +G R H N+VP+QV
Sbjct: 189 VGILAALRHRDATGQGQHIDISLLDSQIAWLVNAGTNYLASGKLPARLANGHPNIVPYQV 248
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
F T++ + + G+D Q++ C+V ++ +A D R+ T
Sbjct: 249 FDTADAPMILAVGNDAQFRRFCEVARIEDVARDSRFCT 286
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 2/123 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+V ++ +A D R+ T R+++RE +C+ ++A + WL + V+ P VN
Sbjct: 269 FCEVARIEDVARDSRFCTNVARIQHREAVCERVQAALRTRPRGSWLRSLEAVNVPCGPVN 328
Query: 61 SISQVFADEHIQ--DIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
++ VF D H+Q L + + G + ++ + S T R PPP L EH D +
Sbjct: 329 NLRDVFDDPHVQARGAHLRMDCEWARDGAVSLLANPLKLSATPVSYRRPPPRLDEHVDEI 388
Query: 119 LKD 121
L+D
Sbjct: 389 LRD 391
>gi|259415867|ref|ZP_05739787.1| L-carnitine dehydratase/bile acid-inducible protein F [Silicibacter
sp. TrichCH4B]
gi|259347306|gb|EEW59083.1| L-carnitine dehydratase/bile acid-inducible protein F [Silicibacter
sp. TrichCH4B]
Length = 399
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 123/278 (44%), Positives = 183/278 (65%), Gaps = 1/278 (0%)
Query: 213 PSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTG-DECRKWGPPFLNNTELS 271
P L V++LDL+RI+AGP T LL DLGA+VIKVE P TG D+ R+WG + +L+
Sbjct: 13 PHGALKGVKVLDLSRILAGPTATQLLGDLGADVIKVENPSTGGDDTRQWGKSVAEDADLT 72
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NRNK+S+ +D TPEGQ II+ LA Q DVLVENF PG L + L Y L E
Sbjct: 73 PYFMAANRNKRSLALDISTPEGQDIIRCLAAQADVLVENFKPGGLAKYGLDYASLRESCP 132
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+L+Y S++G+G GP +++PGYD++A GG++ +TG P+G P KVG+ D+ G+YA
Sbjct: 133 RLVYASISGYGQTGPNREKPGYDLMAQGYGGIMSLTGDPEGAPVKVGVGIADVMCGMYAT 192
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
+++AL H+ TG+GQ+++ L+ Q++ LIN G +YLN G + R G H +++P+
Sbjct: 193 IGILSALRHRDLTGEGQQVELALVDAQIAWLINEGVSYLNTGQKPLRRGNEHPSIMPYGT 252
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
++T +G+V + G+D Q++ + L+ LA DPR+ T
Sbjct: 253 YETRDGHVILAVGNDSQFRRFMAFLALEGLAEDPRFAT 290
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Query: 5 MNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQ 64
+ L+ LA DPR+ T R+ENR L + +T+E + + P V ++ Q
Sbjct: 277 LALEGLAEDPRFATNPARLENRGALNDILIPALRRYSTDEVITAMEAAKVPVGPVKTLDQ 336
Query: 65 VFADEHIQDIKLVKEISHEKYGD--IKIVGPAVAYSLTQPEVRTPPPALGEHTDYVL 119
VF + + ++V + + GD ++++G + +S T R PP G +D +L
Sbjct: 337 VFETDQVAAREMVVTM---QSGDTPLRLLGNPLKFSRTPVTYRKSPPICGADSDEIL 390
>gi|163745417|ref|ZP_02152777.1| Putative acyl-CoA transferase/carnitine dehydratase [Oceanibulbus
indolifex HEL-45]
gi|161382235|gb|EDQ06644.1| Putative acyl-CoA transferase/carnitine dehydratase [Oceanibulbus
indolifex HEL-45]
Length = 372
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 130/290 (44%), Positives = 184/290 (63%), Gaps = 3/290 (1%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE--LS 271
+ PL+ +++++L R++AGP+ L+DLG EVIKVE P GD+ R+WGPPF+ E +
Sbjct: 2 TAPLAGLKVVELARVLAGPWAGQTLSDLGCEVIKVESPA-GDDTRQWGPPFVTRDEDITA 60
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+YF NR K SV VDF+T EGQ +K+L D+L+ENF G L + L Y LS
Sbjct: 61 SYFHSTNRGKASVTVDFRTEEGQAQVKELLADADILIENFKTGGLAKYGLDYASLSAQFP 120
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+LIYCS+TGFG GPY R GYD I + GL+ ITG PDG P K G+A D+ TG+YA
Sbjct: 121 KLIYCSITGFGQTGPYAHRAGYDFIIQGMSGLMSITGEPDGLPQKSGMAITDIFTGVYAS 180
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A++AA+ +++TG GQ ID LL V++ N NYL G R G +H N+ P++V
Sbjct: 181 TAILAAVHQRHQTGVGQHIDMALLDCAVAITGNQAMNYLTTGKAPTRMGNAHPNLTPYEV 240
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
F+ S+G++ I TG+D QYQ +C+++ L+ +A P YL A +A +I
Sbjct: 241 FECSDGHLIIATGNDGQYQRLCQLLGLEDMATAPEYLKNADRVANRPEMI 290
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+++ L+ +A P YL A RV NR + + + T ++ ++ L + P +N
Sbjct: 261 LCQLLGLEDMATAPEYLKNADRVANRPEMIRRLTGATRLRSRDDLLAACEAHGVPAGPIN 320
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGE 113
++ V AD + + + + E G + P +S + + P P LGE
Sbjct: 321 DMADVMADPQV----VARGMQIELDGVPGLRSP-FTFSGAELSLHRPAPKLGE 368
>gi|418297262|ref|ZP_12909104.1| L-carnitine dehydratase [Agrobacterium tumefaciens CCNWGS0286]
gi|355538360|gb|EHH07607.1| L-carnitine dehydratase [Agrobacterium tumefaciens CCNWGS0286]
Length = 400
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 118/278 (42%), Positives = 179/278 (64%), Gaps = 4/278 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE----LS 271
PLS +R+++L R++AGP+ +LAD+GA+VIKVE P GD+ R WGPPF+ + + +
Sbjct: 10 PLSGIRVIELARVLAGPWAGQMLADMGADVIKVENPEGGDDTRAWGPPFVEDADGENLSA 69
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NR K+S+ D KTPEG ++++ L + DV++ENF G L + L Y+ L +N
Sbjct: 70 AYYHATNRGKRSIVADLKTPEGCELVRRLVRTADVVIENFKRGGLAKYGLDYESLRALNP 129
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+LIYCS+TGFG GPY D GYD I + G + ITG DG P K G+A D+ TG+Y+
Sbjct: 130 KLIYCSITGFGQTGPYADLAGYDYIVQGMSGFMSITGEADGQPMKAGVAVADIFTGIYSV 189
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A+ AAL+H ++G+GQ ID LL Q ++L N NYL +G R G +H N+ P++V
Sbjct: 190 SAIQAALIHAIRSGEGQHIDMALLDVQSAVLANQNMNYLISGKPPVRLGNAHPNISPYEV 249
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
T++G++ + G+D Q++ +C ++ + +A D RY T
Sbjct: 250 VPTADGFLILAVGNDGQFRRLCNILGIGAIADDERYAT 287
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 61/129 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ + +A D RY T RV ++ + + + +T++ + L + + P +N
Sbjct: 270 LCNILGIGAIADDERYATNKARVAHKVEVRQIVSTETLKWQKRDLLTACEKNAVPAGPIN 329
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI ++FAD +Q L ++ E I V + S T P P LGEH VL
Sbjct: 330 SIEEMFADPQVQARGLRIDLEAEDGTVIPGVRTPIIMSQTPLRYERPSPKLGEHQAQVLA 389
Query: 121 DLLNYDETT 129
+L N + TT
Sbjct: 390 ELENIERTT 398
>gi|419710757|ref|ZP_14238222.1| putative L-carnitine dehydratase [Mycobacterium abscessus M93]
gi|382940756|gb|EIC65079.1| putative L-carnitine dehydratase [Mycobacterium abscessus M93]
Length = 371
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 117/285 (41%), Positives = 193/285 (67%), Gaps = 2/285 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L + ++D +R++AGP+ TM+L D GAEVIK+E+PV GD+ R+WGPP+ ++ + +TYF
Sbjct: 6 LDGLLVVDFSRVLAGPYATMMLGDFGAEVIKIERPVLGDDTRQWGPPYDSDGQ-ATYFNS 64
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
VNRNK+SV +D +P+GQ ++LA + DV+VENF G +++ LGY+ L ++N LIYC
Sbjct: 65 VNRNKQSVVLDLTSPDGQHRARELAGRADVVVENFRAGTMEKFGLGYQSLKQLNPGLIYC 124
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
++TGFG +G D PGYD++ ++GGL+ +TG P KVG+A +D+ T L+A ++A
Sbjct: 125 AITGFG-RGAGADLPGYDLLVQAVGGLMSVTGPDAAHPSKVGVALVDVLTALHALSGILA 183
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
AL ++ +TG+GQ++D +L+S +S L+N + YL AG+ + G H ++ P+Q F+T++
Sbjct: 184 ALSYRDRTGQGQRVDTDLMSVLLSSLVNQASGYLGAGVVPEALGNRHPSIAPYQTFETAD 243
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
+ I G+DKQ++ + + + + LA D R+ T L + L+
Sbjct: 244 RPIAIAVGNDKQFRLLAQALEMPRLARDDRFATNPLRVRHRGELV 288
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 3/113 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+ + + + LA D R+ T LRV +R L + +E + EK ++W V P +N
Sbjct: 259 LAQALEMPRLARDDRFATNPLRVRHRGELVRVLEQRLREKNADDWYDTLTAVGVPVGPIN 318
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGE 113
I++ F + I L ++ + ++ P V+ S T R PP LG+
Sbjct: 319 DIAEAF--RFAERIGLDVAVTVPGSPEPQVANP-VSMSKTPVVYRNGPPRLGQ 368
>gi|420862825|ref|ZP_15326220.1| L-carnitine dehydrogenase [Mycobacterium abscessus 4S-0303]
gi|420868256|ref|ZP_15331638.1| L-carnitine dehydrogenase [Mycobacterium abscessus 4S-0726-RA]
gi|420871657|ref|ZP_15335037.1| L-carnitine dehydrogenase [Mycobacterium abscessus 4S-0726-RB]
gi|420985794|ref|ZP_15448958.1| L-carnitine dehydrogenase [Mycobacterium abscessus 4S-0206]
gi|421038263|ref|ZP_15501274.1| L-carnitine dehydrogenase [Mycobacterium abscessus 4S-0116-R]
gi|421046858|ref|ZP_15509858.1| L-carnitine dehydrogenase [Mycobacterium abscessus 4S-0116-S]
gi|392067726|gb|EIT93573.1| L-carnitine dehydrogenase [Mycobacterium abscessus 4S-0726-RA]
gi|392074842|gb|EIU00677.1| L-carnitine dehydrogenase [Mycobacterium abscessus 4S-0303]
gi|392075846|gb|EIU01679.1| L-carnitine dehydrogenase [Mycobacterium abscessus 4S-0726-RB]
gi|392189696|gb|EIV15329.1| L-carnitine dehydrogenase [Mycobacterium abscessus 4S-0206]
gi|392226477|gb|EIV51991.1| L-carnitine dehydrogenase [Mycobacterium abscessus 4S-0116-R]
gi|392236311|gb|EIV61809.1| L-carnitine dehydrogenase [Mycobacterium abscessus 4S-0116-S]
Length = 371
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 117/285 (41%), Positives = 193/285 (67%), Gaps = 2/285 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L + ++D +R++AGP+ TM+L D GAEVIK+E+PV GD+ R+WGPP+ ++ + +TYF
Sbjct: 6 LDGLLVVDFSRVLAGPYATMMLGDFGAEVIKIERPVLGDDTRQWGPPYDSDGQ-ATYFNS 64
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
VNRNK+SV +D +P+GQ ++LA + DV+VENF G +++ LGY+ L ++N LIYC
Sbjct: 65 VNRNKQSVVLDLTSPDGQHRARELAGRADVVVENFRAGTMEKFGLGYQSLKQLNPGLIYC 124
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
++TGFG +G D PGYD++ ++GGL+ +TG P KVG+A +D+ T L+A ++A
Sbjct: 125 AITGFG-RGAGADLPGYDLLVQAVGGLMSVTGPDAAHPSKVGVALVDVLTALHALSGILA 183
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
AL ++ +TG+GQ++D +L+S +S L+N + YL AG+ + G H ++ P+Q F+T++
Sbjct: 184 ALSYRDRTGQGQRVDTDLMSVLLSSLVNQASGYLGAGVVPEALGNRHPSIAPYQTFETAD 243
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
+ I G+DKQ++ + + + + LA D R+ T L + L+
Sbjct: 244 RPIAIAVGNDKQFRLLAQALEMPRLARDDRFATNPLRVRHRGELV 288
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 7/115 (6%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+ + + + LA D R+ T LRV +R L + +E + EK ++W V P +N
Sbjct: 259 LAQALEMPRLARDDRFATNPLRVRHRGELVRVLEQRLREKNADDWYDTLTAVGVPAGPIN 318
Query: 61 SISQV--FADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGE 113
I++ FA+ D+ + S E ++ P ++ S T R PP LG+
Sbjct: 319 DIAEAFRFAERLGLDVAVTVPGSPEP----QVANP-ISMSKTPVVYRNGPPRLGQ 368
>gi|424910857|ref|ZP_18334234.1| putative acyl-CoA transferase/carnitine dehydratase [Rhizobium
leguminosarum bv. viciae USDA 2370]
gi|392846888|gb|EJA99410.1| putative acyl-CoA transferase/carnitine dehydratase [Rhizobium
leguminosarum bv. viciae USDA 2370]
Length = 400
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 118/278 (42%), Positives = 179/278 (64%), Gaps = 4/278 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE----LS 271
PLS +R+++L R++AGP+ +LAD+GA+VIKVE P GD+ R WGPPF+ + + +
Sbjct: 10 PLSGIRVIELARVLAGPWAGQMLADMGADVIKVENPEGGDDTRAWGPPFVESNDGENLSA 69
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NR K+S+ D KTPEG ++++ L + DV++ENF G L + L Y+ L +N
Sbjct: 70 AYYHATNRGKRSIVADLKTPEGCELVRRLVRTADVVIENFKRGGLAKYGLDYESLRALNP 129
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+LIYCS+TGFG GPY D GYD I + G + ITG DG P K G+A D+ TG+Y+
Sbjct: 130 KLIYCSITGFGQTGPYADLAGYDYIVQGMSGFMSITGEADGQPMKAGVAVADIFTGIYSV 189
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A+ AAL+H ++G+GQ ID LL Q ++L N NYL +G R G +H N+ P++V
Sbjct: 190 SAIQAALIHAIRSGEGQHIDMALLDVQSAVLANQNMNYLISGRPPVRLGNAHPNISPYEV 249
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
T++G++ + G+D Q++ +C ++ + +A D RY T
Sbjct: 250 VPTADGFLILAVGNDGQFRRLCNILGIGAIADDERYAT 287
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ + +A D RY T RV ++ + + + +T++ + L + + P +N
Sbjct: 270 LCNILGIGAIADDERYATNKARVAHKVEVRQIVSTETLKWQKRDLLTACEKNAVPAGPIN 329
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI ++FAD ++ L ++ E I V + S T P P LGEH VL
Sbjct: 330 SIEEMFADPQVKARGLRIDLEAEDGTVIPGVRTPIIMSQTPLRYERPSPKLGEHQAQVLA 389
Query: 121 DLLNYDETT 129
+L N + TT
Sbjct: 390 ELENIERTT 398
>gi|89055694|ref|YP_511145.1| L-carnitine dehydratase/bile acid-inducible protein F [Jannaschia
sp. CCS1]
gi|88865243|gb|ABD56120.1| L-carnitine dehydratase/bile acid-inducible protein F [Jannaschia
sp. CCS1]
Length = 406
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 122/279 (43%), Positives = 175/279 (62%), Gaps = 5/279 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE-----L 270
PL + +LDL+RI+AGP CT L DLGA +IK+E P GD+ R WGPPF T+ L
Sbjct: 13 PLDGLIVLDLSRILAGPTCTQALGDLGATIIKIEHPERGDDTRTWGPPFATGTDGAPTDL 72
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
S+YF C NRNK SV VD + EGQ+ I+ +A + D+L+ENF PG L + L ++ +
Sbjct: 73 SSYFMCTNRNKLSVAVDISSAEGQETIRQIAARSDILIENFKPGGLVKYGLDHETMLTTF 132
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYA 390
+LI+CS++GFG GP D+PGYD++A G++ +TG DG P KV + D+ TG+YA
Sbjct: 133 PKLIHCSISGFGHTGPNSDKPGYDLMAQGYSGIMSLTGDTDGMPTKVAVGIADVMTGMYA 192
Query: 391 HGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQ 450
++AAL H+ +TG+GQ ID +L+ ++ +IN G +L G R G HA +VP+Q
Sbjct: 193 SVGILAALRHRDRTGQGQHIDLSLVDASLAWMINEGVAHLTTGQPRPRRGNEHATIVPYQ 252
Query: 451 VFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
F ++G+V + G+D QY C + LA DPR+ T
Sbjct: 253 TFACADGFVLVAVGNDLQYTRFCDFLGRPDLADDPRFAT 291
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 2/122 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C + LA DPR+ T + RV NRE L +E E + + + + P VN
Sbjct: 274 FCDFLGRPDLADDPRFATNSARVVNRETLIPMLEVLMKEHSQADIVAGLEARKVPVGPVN 333
Query: 61 SISQVFADEH--IQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
++ Q F+ + +D+++ ++++G + +S T R PPP LGE T V
Sbjct: 334 TVEQAFSSDQARARDMRIDMAKDGIDRDGVELIGNPLKFSATPVTYRRPPPHLGEDTAAV 393
Query: 119 LK 120
L+
Sbjct: 394 LE 395
>gi|311109799|ref|YP_003982650.1| CoA-transferase family III family protein 50 [Achromobacter
xylosoxidans A8]
gi|310764488|gb|ADP19935.1| CoA-transferase family III family protein 50 [Achromobacter
xylosoxidans A8]
Length = 420
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 129/280 (46%), Positives = 182/280 (65%), Gaps = 9/280 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+RI+AGP+CT LADLGAEVIK+E+P TGD+ R WGPP++ +T S
Sbjct: 14 LSHIRVLDLSRILAGPWCTQNLADLGAEVIKIERPGTGDDTRAWGPPWIRDGAGQDTRDS 73
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+Y+ NR KKS+ +D PEGQ+I+++LA Q DV++EN+ G L R L Y L IN
Sbjct: 74 SYYAAANRGKKSLTLDISKPEGQRIVRELAAQSDVVIENYKIGDLKRYGLDYASLRAINP 133
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+L+YCS+TG+G +GP +PGYD + +IGGL+ ITG P G P K GIA D+ TG
Sbjct: 134 RLVYCSITGYGQEGPSASKPGYDFVFQAIGGLMSITGERDDLPGGGPQKAGIAIADVITG 193
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA A++AAL H+ +G GQ ID LL V++ N Y G KR+G +HA++V
Sbjct: 194 MYATIAILAALNHRDVSGLGQYIDMALLDCIVALGGNQVTGYFANGKLPKRYGNAHASLV 253
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
P+QVF ++G + + G+D Q+Q C + L D R+
Sbjct: 254 PYQVFAVADGEIVVAVGNDDQWQRYCAAIERPDLGADARW 293
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 4/142 (2%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C + L D R+ R++ R+ L E+ + + +W+ + P ++N
Sbjct: 279 CAAIERPDLGADARWTKVTGRIQGRDTLVPELARSMLARPAADWIERLEANGVPCGRIND 338
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDI----KIVGPAVAYSLTQPEVRTPPPALGEHTDY 117
+QVF D + L +I + D+ + + S T P PPP LG+ TD
Sbjct: 339 YAQVFQDPQVLHRGLRVDIPRPAHADVDGQVSTIASPLRLSDTPPRYDLPPPRLGDSTDS 398
Query: 118 VLKDLLNYDETTIAKLKEKKIL 139
VL LL Y IA L+ ++I+
Sbjct: 399 VLGALLGYSAEQIAGLRAQRIV 420
>gi|380481398|emb|CCF41865.1| CoA-transferase family III [Colletotrichum higginsianum]
Length = 396
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 128/280 (45%), Positives = 180/280 (64%), Gaps = 9/280 (3%)
Query: 225 LTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL--------NNTELSTYFTC 276
+TR++AGP+CT +L DLGAEVIKVE PV GD+ R WGPP+ S YF
Sbjct: 1 MTRVLAGPYCTQILGDLGAEVIKVEHPVRGDDTRAWGPPYAAYKADSSKEGPGESAYFLA 60
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
VNRNKKS+ ++F+ P+G +I+ L +CD+LVEN++PG L + + Y+ L IN LIY
Sbjct: 61 VNRNKKSLGLNFQHPDGTEILHGLVSKCDILVENYLPGTLRKYGMDYETLRAINPGLIYT 120
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S+TG+G GPY DR GYD++ + GL+HITG DG P KVG+A DL TGLY ++MA
Sbjct: 121 SITGYGQTGPYSDRAGYDVMVEAEFGLMHITGSRDGEPVKVGVAVTDLTTGLYTSNSIMA 180
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAG-IEGKRWGTSHANVVPHQVFKTS 455
ALL + +TGKGQ ID L Q + L N+ ++ L +G + RWGT+H ++VP++ FKT
Sbjct: 181 ALLARARTGKGQHIDVALSDCQTATLANIASSCLISGKKDSGRWGTAHPSIVPYKSFKTK 240
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILA 495
+G + G G+D+ Y +C+ + D +Y T A +A
Sbjct: 241 DGDILFGGGNDRLYGILCEGLGRPEWRDDAKYRTNAQRVA 280
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 75/140 (53%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ + D +Y T A RV NR L IEA T+ +TT EWL +F+G PYA VN
Sbjct: 257 LCEGLGRPEWRDDAKYRTNAQRVANRVELEALIEAVTVTRTTAEWLAVFEGRGMPYAAVN 316
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ EH +V E+ H + G I++V V YS ++P +RT PP LG+HT VL
Sbjct: 317 DVQGALGHEHTLARGMVVEMEHGECGPIRMVNTPVKYSDSEPRIRTAPPTLGQHTSEVLG 376
Query: 121 DLLNYDETTIAKLKEKKILG 140
+ L E I LK +LG
Sbjct: 377 EHLGLSEERIRSLKGSGVLG 396
>gi|359785703|ref|ZP_09288850.1| caib/baif family protein [Halomonas sp. GFAJ-1]
gi|359296936|gb|EHK61177.1| caib/baif family protein [Halomonas sp. GFAJ-1]
Length = 408
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 133/284 (46%), Positives = 179/284 (63%), Gaps = 10/284 (3%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TEL 270
PL+ +R+LDL+R++AGP+CT +LAD+GAEVIK+E P GD+ R WGPP+LN+ ++
Sbjct: 4 PLTGLRVLDLSRVMAGPWCTQILADMGAEVIKIEHPTLGDDTRHWGPPWLNDKQGKESQE 63
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
S Y+ NR K SV VD PEGQ ++++LA + D+LVENF G L R L Y L IN
Sbjct: 64 SAYYLSANRGKHSVTVDIGQPEGQALVRELAAESDILVENFKSGGLARKGLDYATLEAIN 123
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPC----KVGIASIDLAT 386
LIYCS+TGFG GP GYD + + GL+ ITG DG P +VG+A DL T
Sbjct: 124 PGLIYCSITGFGQTGPMAAMAGYDYLIQAQSGLMSITGAADGEPGAGPQRVGMAVSDLTT 183
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANV 446
G+ A A++ AL H++ TG+GQ ID LL QVS L N NY +G R G H N+
Sbjct: 184 GMNATIAILGALHHRHSTGEGQYIDMALLDVQVSWLANQALNYFCSGTPPTRTGEYHPNL 243
Query: 447 VPHQVFKTSNGY-VTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
VP+Q F T++G V I G+D Q++ C+ + LA+DPR+ T
Sbjct: 244 VPYQPFPTADGEKVIIAIGNDGQFKRFCEAVGRPELAIDPRFGT 287
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 74/139 (53%), Gaps = 1/139 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+ + LA+DPR+ T RV++R +L + T +T+ EW+ + +S P +
Sbjct: 270 FCEAVGRPELAIDPRFGTNPERVKHRLVLIPLMVEITRTRTSHEWIEMLGAISVPCGPIQ 329
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I+QVF D +Q + E+ + G + V + YS T PPP LGE TD VL+
Sbjct: 330 NIAQVFNDPQVQARNMQIELESDT-GVVPGVANPIKYSKTPLAYHKPPPRLGEDTDSVLE 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
LL+ + I+ L++K ++
Sbjct: 389 RLLHKSASDISALRQKGVV 407
>gi|418418994|ref|ZP_12992179.1| putative L-carnitine dehydratase [Mycobacterium abscessus subsp.
bolletii BD]
gi|364002167|gb|EHM23359.1| putative L-carnitine dehydratase [Mycobacterium abscessus subsp.
bolletii BD]
Length = 371
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 117/285 (41%), Positives = 193/285 (67%), Gaps = 2/285 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L + ++D +R++AGP+ TM+L D GAEVIK+E+PV GD+ R+WGPP+ ++ + +TYF
Sbjct: 6 LDGLLVVDFSRVLAGPYATMMLGDFGAEVIKIERPVLGDDTRQWGPPYDSDGQ-ATYFNS 64
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
VNRNK+SV +D +P+GQ ++LA + DV+VENF G +++ LGY+ L ++N LIYC
Sbjct: 65 VNRNKQSVVLDLTSPDGQHRARELAGRADVVVENFRAGTMEKFGLGYQSLKQLNPGLIYC 124
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
++TGFG +G D PGYD++ ++GGL+ +TG P KVG+A +D+ T L+A ++A
Sbjct: 125 AITGFG-RGAGADLPGYDLLVQAVGGLMSVTGPDAAHPSKVGVALVDVLTALHALSGILA 183
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
AL ++ +TG+GQ++D +L+S +S L+N + YL AG+ + G H ++ P+Q F+T++
Sbjct: 184 ALSYRDRTGQGQRVDTDLMSVLLSSLVNQASGYLGAGVVPEALGNRHPSIAPYQTFETAD 243
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
+ I G+DKQ++ + + + + LA D R+ T L + L+
Sbjct: 244 RPIAIAVGNDKQFRLLAQALEMPRLARDDRFATNPLRVRHRGELV 288
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 3/113 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+ + + + LA D R+ T LRV +R L + +E + EK ++W V P +N
Sbjct: 259 LAQALEMPRLARDDRFATNPLRVRHRGELVRVLEQRLREKNADDWYDTLTAVGVPAGPIN 318
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGE 113
I++ F + I L ++ ++ P ++ S T R PP LG+
Sbjct: 319 DIAEAF--RFAERIGLDVAVTVPGSPGPQVANP-ISMSKTPVVYRNGPPRLGQ 368
>gi|169627923|ref|YP_001701572.1| putative L-carnitine dehydratase [Mycobacterium abscessus ATCC
19977]
gi|420913482|ref|ZP_15376794.1| L-carnitine dehydrogenase [Mycobacterium abscessus 6G-0125-R]
gi|420914689|ref|ZP_15377995.1| L-carnitine dehydrogenase [Mycobacterium abscessus 6G-0125-S]
gi|420920489|ref|ZP_15383786.1| L-carnitine dehydrogenase [Mycobacterium abscessus 6G-0728-S]
gi|420925571|ref|ZP_15388860.1| L-carnitine dehydrogenase [Mycobacterium abscessus 6G-1108]
gi|420965117|ref|ZP_15428333.1| L-carnitine dehydrogenase [Mycobacterium abscessus 3A-0810-R]
gi|420975921|ref|ZP_15439107.1| L-carnitine dehydrogenase [Mycobacterium abscessus 6G-0212]
gi|420981299|ref|ZP_15444472.1| L-carnitine dehydrogenase [Mycobacterium abscessus 6G-0728-R]
gi|421009289|ref|ZP_15472398.1| L-carnitine dehydrogenase [Mycobacterium abscessus 3A-0119-R]
gi|421011345|ref|ZP_15474443.1| L-carnitine dehydrogenase [Mycobacterium abscessus 3A-0122-R]
gi|421019648|ref|ZP_15482704.1| L-carnitine dehydrogenase [Mycobacterium abscessus 3A-0122-S]
gi|421021787|ref|ZP_15484838.1| L-carnitine dehydrogenase [Mycobacterium abscessus 3A-0731]
gi|421027553|ref|ZP_15490592.1| L-carnitine dehydrogenase [Mycobacterium abscessus 3A-0930-R]
gi|421032391|ref|ZP_15495416.1| L-carnitine dehydrogenase [Mycobacterium abscessus 3A-0930-S]
gi|169239890|emb|CAM60918.1| Putative L-carnitine dehydratase [Mycobacterium abscessus]
gi|392115476|gb|EIU41245.1| L-carnitine dehydrogenase [Mycobacterium abscessus 6G-0125-R]
gi|392124763|gb|EIU50522.1| L-carnitine dehydrogenase [Mycobacterium abscessus 6G-0125-S]
gi|392130325|gb|EIU56071.1| L-carnitine dehydrogenase [Mycobacterium abscessus 6G-0728-S]
gi|392141228|gb|EIU66954.1| L-carnitine dehydrogenase [Mycobacterium abscessus 6G-1108]
gi|392173866|gb|EIU99533.1| L-carnitine dehydrogenase [Mycobacterium abscessus 6G-0212]
gi|392177097|gb|EIV02755.1| L-carnitine dehydrogenase [Mycobacterium abscessus 6G-0728-R]
gi|392194895|gb|EIV20514.1| L-carnitine dehydrogenase [Mycobacterium abscessus 3A-0119-R]
gi|392205371|gb|EIV30954.1| L-carnitine dehydrogenase [Mycobacterium abscessus 3A-0122-S]
gi|392212655|gb|EIV38215.1| L-carnitine dehydrogenase [Mycobacterium abscessus 3A-0122-R]
gi|392217357|gb|EIV42895.1| L-carnitine dehydrogenase [Mycobacterium abscessus 3A-0731]
gi|392232201|gb|EIV57703.1| L-carnitine dehydrogenase [Mycobacterium abscessus 3A-0930-S]
gi|392233513|gb|EIV59012.1| L-carnitine dehydrogenase [Mycobacterium abscessus 3A-0930-R]
gi|392258096|gb|EIV83543.1| L-carnitine dehydrogenase [Mycobacterium abscessus 3A-0810-R]
Length = 371
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 117/285 (41%), Positives = 193/285 (67%), Gaps = 2/285 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L + ++D +R++AGP+ TM+L D GAEVIK+E+PV GD+ R+WGPP+ ++ + +TYF
Sbjct: 6 LDGLLVVDFSRVLAGPYATMMLGDFGAEVIKIERPVLGDDTRQWGPPYDSDGQ-ATYFNS 64
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
VNRNK+SV +D +P+GQ ++LA + DV+VENF G +++ LGY+ L ++N LIYC
Sbjct: 65 VNRNKQSVVLDLTSPDGQHRARELAGRADVVVENFRAGTMEKFGLGYQSLKQLNPGLIYC 124
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
++TGFG +G D PGYD++ ++GGL+ +TG P KVG+A +D+ T L+A ++A
Sbjct: 125 AITGFG-RGAGADLPGYDLLVQAVGGLMSVTGPDAAHPSKVGVALVDVLTALHALSGILA 183
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
AL ++ +TG+GQ++D +L+S +S L+N + YL AG+ + G H ++ P+Q F+T++
Sbjct: 184 ALSYRDRTGQGQRVDTDLMSVLLSSLVNQASGYLGAGVVPEALGNRHPSIAPYQTFETAD 243
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
+ I G+DKQ++ + + + + LA D R+ T L + L+
Sbjct: 244 RPIAIAVGNDKQFRLLVQALEMPRLARDDRFATNPLRVRHRGELV 288
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 7/115 (6%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+ + + + LA D R+ T LRV +R L + +E + EK ++W V P +N
Sbjct: 259 LVQALEMPRLARDDRFATNPLRVRHRGELVRVLEQRLREKNADDWYDTLTAVGVPAGPIN 318
Query: 61 SISQV--FADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGE 113
I++ FA+ D+ + S E ++ P ++ S T R PP LG+
Sbjct: 319 DIAEAFRFAERLGLDVAVTVPGSPEP----QVANP-ISMSKTPVVYRNGPPRLGQ 368
>gi|299533159|ref|ZP_07046543.1| L-carnitine dehydratase/bile acid-inducible [Comamonas testosteroni
S44]
gi|298718689|gb|EFI59662.1| L-carnitine dehydratase/bile acid-inducible [Comamonas testosteroni
S44]
Length = 420
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 130/294 (44%), Positives = 188/294 (63%), Gaps = 13/294 (4%)
Query: 209 SSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL--- 265
S+ + L+ +++LDL+R++AGP+ T +LADLGA+V+KVE+PV GD+ R WGPPFL
Sbjct: 4 STSTSTGALAGIKVLDLSRVLAGPWATQMLADLGADVVKVERPVAGDDTRHWGPPFLRDD 63
Query: 266 --NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGY 323
N+T ++YFT NRNK+S+ VD PEG+ +++ +A++ DV+VENF G L + L Y
Sbjct: 64 AGNDTREASYFTACNRNKRSLTVDMAHPEGRALLQRMAQEADVVVENFKTGGLAQYGLDY 123
Query: 324 KHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGI 379
K L +N +L+YCS+TGFG GPY +R GYD++ ++ GL+ ITGH P G P KVG+
Sbjct: 124 KSLKALNPRLVYCSITGFGQDGPYAERAGYDLMVQAMCGLMSITGHADGEPGGGPLKVGV 183
Query: 380 ASIDLATGLYAHGAVMAAL----LHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIE 435
A ID+ TGLYA A++AAL + TG+GQ ID LL +++L N A +L G
Sbjct: 184 AVIDVFTGLYASNAILAALNARDNARNGTGQGQYIDMALLDVGMAVLANQAAGFLATGQA 243
Query: 436 GKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
R G H ++ P+Q F T +G V + G+D Q+ C + ALD R+ T
Sbjct: 244 PSRAGNIHPSLAPYQDFPTLDGNVLLAIGNDGQFARFCAAIGQDGWALDARFAT 297
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 74/142 (52%), Gaps = 4/142 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C + ALD R+ T RV+NR L + ++ + ++++T +W+ + + + P +N
Sbjct: 280 FCAAIGQDGWALDARFATNTARVQNRAALLELMKPQMLQRSTADWIALLEDKAVPCGPIN 339
Query: 61 SISQVFADEHIQDIKLVKEI---SHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDY 117
+I+Q F D ++ + + + + + G I V + S T R PPALG+HTD
Sbjct: 340 TIAQAFEDPQVKARGIQQSLPRNASDGIGHIATVANPIRLSATPVTYRNAPPALGQHTDE 399
Query: 118 VLKDLLNYDETTIAKLKEKKIL 139
VL++ D+ IA L E+ ++
Sbjct: 400 VLRE-FGLDDNAIAALHEQGVV 420
>gi|264679747|ref|YP_003279656.1| bile acid-inducible L-carnitine dehydratase [Comamonas testosteroni
CNB-2]
gi|262210262|gb|ACY34360.1| L-carnitine dehydratase/bile acid-inducible [Comamonas testosteroni
CNB-2]
Length = 420
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 130/294 (44%), Positives = 188/294 (63%), Gaps = 13/294 (4%)
Query: 209 SSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL--- 265
S+ + L+ +++LDL+R++AGP+ T +LADLGA+V+KVE+PV GD+ R WGPPFL
Sbjct: 4 STSTSTGALAGIKVLDLSRVLAGPWATQMLADLGADVVKVERPVAGDDTRHWGPPFLRDD 63
Query: 266 --NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGY 323
N+T ++YFT NRNK+S+ VD PEG+ +++ +A++ DV+VENF G L + L Y
Sbjct: 64 AGNDTREASYFTACNRNKRSLTVDMAHPEGRALLQRMAQEADVVVENFKTGGLAQYGLDY 123
Query: 324 KHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGI 379
K L +N +L+YCS+TGFG GPY +R GYD++ ++ GL+ ITGH P G P KVG+
Sbjct: 124 KSLKALNPRLVYCSITGFGQDGPYAERAGYDLMVQAMCGLMSITGHADGEPGGGPLKVGV 183
Query: 380 ASIDLATGLYAHGAVMAAL----LHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIE 435
A ID+ TGLYA A++AAL + TG+GQ ID LL +++L N A +L G
Sbjct: 184 AVIDVFTGLYASNAILAALNARDNARNGTGQGQYIDMALLDVGMAVLANQAAGFLATGQA 243
Query: 436 GKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
R G H ++ P+Q F T +G V + G+D Q+ C + ALD R+ T
Sbjct: 244 PSRAGNIHPSLAPYQDFPTLDGNVLLAIGNDGQFARFCAAIGQDGWALDARFAT 297
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 73/142 (51%), Gaps = 4/142 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C + ALD R+ T RV+NR L + ++ + ++++T W+ + + + P +N
Sbjct: 280 FCAAIGQDGWALDARFATNTARVQNRAALLELMKPQMLQRSTANWIALLEDKAVPCGPIN 339
Query: 61 SISQVFADEHIQDIKLVKEI---SHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDY 117
+I+Q F D ++ + K + + + G I V + S T R PPALG+HTD
Sbjct: 340 TIAQAFDDPQVKARGIQKSLPRNASDGIGHIATVANPIRLSATPVTYRNAPPALGQHTDE 399
Query: 118 VLKDLLNYDETTIAKLKEKKIL 139
VL++ D+ IA L E+ ++
Sbjct: 400 VLRE-FGLDDNAIAALHEQGVV 420
>gi|110678976|ref|YP_681983.1| CAIB/BAIF family protein [Roseobacter denitrificans OCh 114]
gi|109455092|gb|ABG31297.1| CAIB/BAIF family protein [Roseobacter denitrificans OCh 114]
Length = 402
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 126/279 (45%), Positives = 179/279 (64%), Gaps = 6/279 (2%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTG-DECRKWGPPFLNN-----TEL 270
L + +LDL+RI+AGP T LL DLGA VIK+E P TG D+ R WGP + N T+L
Sbjct: 11 LDGLVVLDLSRILAGPTATQLLGDLGATVIKIENPKTGGDDTRGWGPNYALNEDGTRTDL 70
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
S YF NRNK+SV VD TP+GQ I++ LA + DV++EN+ PG L + L + L +
Sbjct: 71 SAYFMAANRNKQSVSVDLSTPDGQAIVQKLAARADVVIENYKPGGLKKYGLDHATLCAAH 130
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYA 390
L+YCS++GFG GP +D+PGYD++A GG++ +TG PDG P KVG+ D+ G+YA
Sbjct: 131 PALVYCSISGFGQTGPNRDQPGYDLMAQGYGGIMSLTGEPDGQPMKVGVGIADVMCGMYA 190
Query: 391 HGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQ 450
++AAL H+ TG+GQ ID +L+ Q++ LIN G NYL +G R G +H N+VP++
Sbjct: 191 TIGILAALRHRDATGEGQHIDLSLVDAQMAWLINEGTNYLTSGKLPVRRGNAHPNIVPYE 250
Query: 451 VFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
F +G+V + G+D Q+ C V+ +A D R+ T
Sbjct: 251 AFACCDGHVLVAVGNDAQFARFCDVLGCPEMAADARFNT 289
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 63/131 (48%), Gaps = 2/131 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C V+ +A D R+ T R+ENR++L +I + T + + V P +N
Sbjct: 272 FCDVLGCPEMAADARFNTNLARIENRDVLIPQIADRLSRITKADLIARLNAVKVPVGPIN 331
Query: 61 SISQVFADEHIQDIKLVKEISHE--KYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
++++ + Q +V+E++ + G ++++G + S T PPP G+ T+ V
Sbjct: 332 TVAEALHSDQAQARGVVQEMAAPGVEGGAVRLLGNPLKLSRTPVRYDRPPPRFGQDTEAV 391
Query: 119 LKDLLNYDETT 129
L++ D+ T
Sbjct: 392 LREFGLSDDKT 402
>gi|261322707|ref|ZP_05961904.1| acyl-CoA transferase/carnitine dehydratase [Brucella neotomae 5K33]
gi|261298687|gb|EEY02184.1| acyl-CoA transferase/carnitine dehydratase [Brucella neotomae 5K33]
Length = 420
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 124/281 (44%), Positives = 186/281 (66%), Gaps = 3/281 (1%)
Query: 212 NPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELS 271
N +LPL+ +++LDL+R++AGP+ TM LAD+GAEV K+E GD+ R W P N +S
Sbjct: 14 NAALPLAGIKVLDLSRVLAGPWATMSLADMGAEVWKIENIQGGDDTRAWSVP--NYKGVS 71
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
TYF C NR KKS+ +D K+ EG +II +LAKQ DV+VENF G ++RL + Y+ L +N
Sbjct: 72 TYFLCANRGKKSLALDLKSREGLEIIHELAKQADVVVENFRSGTVERLKIDYESLKALNP 131
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
++YCS++G+G GP RPGYD + + GL+ ITG DG P ++G+A D+ G+ A
Sbjct: 132 GIVYCSISGYGQTGPEAQRPGYDFVVQAESGLMSITGQIDGEPTRIGVAMTDIVAGMVAT 191
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
+V+AAL + TG GQ ID +L ++ LINVG+ +LN G R+G +H VVP+Q+
Sbjct: 192 QSVLAALYQRKTTGLGQYIDVSLYECALNTLINVGSAHLNGGHVPARFGNAHPTVVPYQI 251
Query: 452 FKTSNGYVTIGTGSDKQYQDMC-KVMNLQHLALDPRYLTGA 491
F+ S+G + G+D+Q+ +C ++++L LA D R+ T +
Sbjct: 252 FECSDGAFALAVGNDRQFAILCERIIDLPELAADERFKTAS 292
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%)
Query: 3 KVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSI 62
++++L LA D R+ T + R NR L + + T + W+ + P QV ++
Sbjct: 275 RIIDLPELAADERFKTASGRALNRAALIPPMAERFRTNTRQHWMSACLKMGVPAGQVKTV 334
Query: 63 SQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDL 122
+ F +++ ++V+++ G I +V PA + PP LGE + VL D+
Sbjct: 335 PEAFESPNVKARQVVQKLESAHLGPISLVRPAQGLKAQENAAYKAPPMLGEDSASVLGDV 394
Query: 123 LNYDETTIAKL 133
L D +A L
Sbjct: 395 LGLDGNKLADL 405
>gi|297559821|ref|YP_003678795.1| bile acid-inducible L-carnitine dehydratase protein F [Nocardiopsis
dassonvillei subsp. dassonvillei DSM 43111]
gi|296844269|gb|ADH66289.1| L-carnitine dehydratase/bile acid-inducible protein F [Nocardiopsis
dassonvillei subsp. dassonvillei DSM 43111]
Length = 431
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 123/280 (43%), Positives = 177/280 (63%), Gaps = 5/280 (1%)
Query: 215 LPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL---- 270
LPL+ VR+ DL+R++AGP+ TMLLAD+GAEV+KVEQP GD+ R WGPP+
Sbjct: 27 LPLAGVRVADLSRVLAGPYATMLLADMGAEVVKVEQPGRGDDTRSWGPPWAGEAGPEGHG 86
Query: 271 -STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEI 329
+ YF VNRNK+S+ VD K PEG +++L DV+V+NF PG +DRL LGY+ +S
Sbjct: 87 EAAYFLSVNRNKRSLAVDLKDPEGLAAVRELCAASDVVVQNFRPGVIDRLGLGYEAVSAR 146
Query: 330 NSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLY 389
N ++YCSV+GFG + RPG+DI+ + GL+ TG +GP KVG+A D+ TGL
Sbjct: 147 NPAVVYCSVSGFGPEHEPATRPGFDIVVQAESGLMAATGPAEGPASKVGVALTDVLTGLN 206
Query: 390 AHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPH 449
A V+ AL+ TG+G+ I +L+++ +S L+N+ L G E R G +H +VP+
Sbjct: 207 AAVGVLGALMRARVTGRGENISVSLINSTLSGLVNLTQQALVTGAEPARVGNAHTTIVPY 266
Query: 450 QVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
Q F T++ + + G+D YQ +C ++ L DPRY T
Sbjct: 267 QTFATADAEIVVAAGNDALYQRLCAALDRPDLGADPRYAT 306
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 38/91 (41%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ L DPRY T RV +RE L E+ A + + W+ + G P +V
Sbjct: 289 LCAALDRPDLGADPRYATNPGRVAHREELVGELTATLRSRPADHWMELLVGAGVPVGRVR 348
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIV 91
+ +++ + H G I+ V
Sbjct: 349 GVLDALRAADASGDDVLRTVKHPTAGLIEQV 379
>gi|390567205|ref|ZP_10247553.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
terrae BS001]
gi|389940905|gb|EIN02686.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
terrae BS001]
Length = 402
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 126/295 (42%), Positives = 189/295 (64%), Gaps = 3/295 (1%)
Query: 208 LSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN 267
+S+ N SLPL+ VRILDL+R++AGP+C M+L DLGAE+IKVE P GD+ R WG
Sbjct: 1 MSNLNSSLPLAGVRILDLSRVLAGPWCAMVLGDLGAEIIKVEHPKRGDDTRDWG--LRVG 58
Query: 268 TELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLS 327
+TYF VNRNK+SVC+D +TPEGQ++ ++LA+Q DV+++NF G ++L LGY+ LS
Sbjct: 59 ASETTYFNSVNRNKRSVCLDLQTPEGQRLARELAQQSDVVIQNFKYGGAEKLGLGYEQLS 118
Query: 328 EINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATG 387
+ LIYCS++G+ +GP RPGYD++ GL+ + G D PP K GIA++DL TG
Sbjct: 119 QGREDLIYCSISGYDRRGPEASRPGYDVVVQGEAGLMALNGEADQPPLKFGIAAVDLFTG 178
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+Y+ AV+AAL + K+GKG+ I+ L + + G + G + R+G +H ++V
Sbjct: 179 MYSAQAVLAALFERQKSGKGRHIEMALFDCGLMITSYCGLESMLMGDDPPRYGNAHPSIV 238
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCK-VMNLQHLALDPRYLTGALILAMTSHLI 501
P+ VF +G V I G+++QY+ C+ V+ L + R+ T + A L+
Sbjct: 239 PYGVFDAEDGPVVIAVGTNRQYERFCREVIERPDLVDEERFRTNIVRAANREALV 293
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 63/137 (45%)
Query: 3 KVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSI 62
+V+ L + R+ T +R NRE L EI + ++ + L P +V +
Sbjct: 266 EVIERPDLVDEERFRTNIVRAANREALVPEIRRELGKRKRLDLLERLTQAGIPCGEVLGL 325
Query: 63 SQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDL 122
+ + + LV +H + G ++ P + + VR+ PP LGE T+ VL+ L
Sbjct: 326 HEALTSKRASEGGLVTTYTHPEAGSTHVLSPPYRFDGVRLPVRSGPPKLGEGTNDVLQSL 385
Query: 123 LNYDETTIAKLKEKKIL 139
L + +++LK + ++
Sbjct: 386 LGLSDEQLSQLKAEGVV 402
>gi|99080230|ref|YP_612384.1| L-carnitine dehydratase/bile acid-inducible protein F [Ruegeria sp.
TM1040]
gi|99036510|gb|ABF63122.1| L-carnitine dehydratase/bile acid-inducible protein F [Ruegeria sp.
TM1040]
Length = 374
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 127/287 (44%), Positives = 178/287 (62%), Gaps = 3/287 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN--NTELSTY 273
PL +++++L RI+AGP+ LADLGAEV+KVE P GD+ R+WGPPF+ + + Y
Sbjct: 3 PLHGLKVVELARILAGPWIGQALADLGAEVVKVESP-EGDDTRRWGPPFVEREGDKTAAY 61
Query: 274 FTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQL 333
+ NR K V DF+T EGQ ++DL + D+L+ENF G L + L ++ LS +N +L
Sbjct: 62 YYAANRGKTCVTADFRTSEGQAQVRDLVRDADILIENFKVGGLKKYGLDFESLSALNPRL 121
Query: 334 IYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGA 393
IYCSVTGFG GPY R GYD + + GL+ ITG DG P KVG+A D+ TGLY
Sbjct: 122 IYCSVTGFGQDGPYATRAGYDFLLQGMSGLMSITGAADGEPQKVGVAITDVVTGLYGSIG 181
Query: 394 VMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFK 453
++AA+ +++TG+GQ ID +LL +ML N NYL G R G H N+ P+QV
Sbjct: 182 ILAAVEQRHRTGRGQHIDMSLLDCATAMLANQNMNYLVTGESPTRMGNEHPNIAPYQVMA 241
Query: 454 TSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHL 500
+G+V + G+D Q+ +C V+NL L DPR+ T L +A + L
Sbjct: 242 VRDGHVILAVGNDGQFTRLCDVLNLAGLKDDPRFSTNQLRVAHRADL 288
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C V+NL L DPR+ T LRV +R L + A + + + L + + P +N
Sbjct: 260 LCDVLNLAGLKDDPRFSTNQLRVAHRADLTPLLAAALAQWSQSDLLAALEAATVPAGPIN 319
Query: 61 SISQVFADEHIQ 72
+I Q F D I+
Sbjct: 320 TIGQAFEDAQIK 331
>gi|218672601|ref|ZP_03522270.1| putative acyl-CoA transferase/L-carnitine dehydrogenase protein
[Rhizobium etli GR56]
Length = 282
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 118/273 (43%), Positives = 174/273 (63%), Gaps = 4/273 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE----LS 271
PL+ +R+++L R++AGP+ +LADLGA+VIKVE P GD+ R+WGPPF+ + +
Sbjct: 10 PLAGIRVIELARVLAGPWAGQMLADLGADVIKVENPDGGDDTRQWGPPFVEGADGENLSA 69
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NR K+S+ D K+PEGQ +++ LA DV++ENF G L + L Y L +N
Sbjct: 70 AYYHAANRGKRSIAADLKSPEGQDLVRRLASTADVVIENFKLGGLVKYGLDYDSLRRLNP 129
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+L+YCS+TGFG GPY GYD I + G + ITG PDG P K G+A D+ TG+YA
Sbjct: 130 KLVYCSITGFGQTGPYASLAGYDYIVQGMSGFMSITGEPDGQPMKAGVAIADIFTGIYAV 189
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A+ AAL+H KTG+GQ +D LL Q ++L N NYL +G R G +H N+ P++V
Sbjct: 190 SAIEAALIHALKTGEGQLVDMALLDVQSAVLANQNMNYLVSGAAPTRLGNAHPNISPYEV 249
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALD 484
++GY+ + G+D Q+ +C ++ L+ +A D
Sbjct: 250 VPAADGYLILAVGNDGQFARLCTILGLETIAAD 282
>gi|398378997|ref|ZP_10537145.1| putative acyl-CoA transferase/carnitine dehydratase [Rhizobium sp.
AP16]
gi|397723787|gb|EJK84274.1| putative acyl-CoA transferase/carnitine dehydratase [Rhizobium sp.
AP16]
Length = 400
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 122/278 (43%), Positives = 178/278 (64%), Gaps = 4/278 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE----LS 271
PL+ +R+++L R++AGP+ +LADLGA+VIKVE P GD+ R+WGPPF+ + +
Sbjct: 10 PLTGIRVIELARVLAGPWAGQMLADLGADVIKVENPDGGDDTRQWGPPFVEGKDGENLSA 69
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NR K+SV D KT EGQ++++ L DV++ENF G L + L Y+ L +IN
Sbjct: 70 AYYHSTNRGKRSVVADLKTEEGQELVRRLVLTADVVIENFKLGGLVKYGLDYESLRKINP 129
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+L+YCS+TGFG GPY GYD I + G + ITG PDG P K G+A D+ TG+YA
Sbjct: 130 KLVYCSITGFGQTGPYAGLAGYDYIVQGMSGFMSITGEPDGQPMKAGVAIADIFTGIYAV 189
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A+ AAL+H KTG+GQ +D LL Q ++L N NYL +G R G +H N+ P++V
Sbjct: 190 SAIEAALIHALKTGEGQLVDMALLDVQSAVLANQNMNYLISGKAPVRLGNAHPNISPYEV 249
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
T++GY+ + G+D Q++ +C ++ + A D RY T
Sbjct: 250 VPTADGYLILAIGNDGQFRRLCAILGIDSHADDERYAT 287
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 54/122 (44%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ + A D RY T RV +R + I AKT+ + L + + P +N
Sbjct: 270 LCAILGIDSHADDERYATNKARVAHRHDVRAFISAKTLTWNKADLLKACEDNAVPAGAIN 329
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I +FAD I+ L ++ I V V S T P P LGEH + VL
Sbjct: 330 TIEDMFADPQIKARGLRIDLEDAVGTVIPSVRTPVVLSETPLTYTRPSPRLGEHQEEVLA 389
Query: 121 DL 122
+L
Sbjct: 390 EL 391
>gi|418404871|ref|ZP_12978310.1| hypothetical protein SM0020_32155 [Sinorhizobium meliloti
CCNWSX0020]
gi|359501182|gb|EHK73805.1| hypothetical protein SM0020_32155 [Sinorhizobium meliloti
CCNWSX0020]
Length = 394
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 129/280 (46%), Positives = 178/280 (63%), Gaps = 5/280 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL----S 271
PL +R+L+L RI+AGP+ LADLGA+VIKVE P GD+ R WGPPF+ + +
Sbjct: 4 PLKGIRVLELARILAGPWIGQTLADLGADVIKVESPA-GDDTRTWGPPFVTGEDDERLDA 62
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NR K+SV +DF T EGQ+ ++ LA Q DVL+ENF G L + L + L ++N
Sbjct: 63 AYFHACNRGKRSVVLDFTTAEGQEAVRRLAAQADVLLENFKVGGLAKYGLDCESLRKVNP 122
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+LIYCSVTGFG GPY R GYD I + G++ +TG PD P K+G+A D+ TGLY
Sbjct: 123 RLIYCSVTGFGQDGPYAHRAGYDYIVQGMSGIMDLTGEPDREPQKIGVAFADIFTGLYGV 182
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
AV AAL + +TG+GQ+ID LL +L N N+L +G +R G +H N+ P+QV
Sbjct: 183 IAVQAALAQRERTGEGQQIDMALLDCMTGVLANQALNFLVSGKAPRRLGNAHPNIAPYQV 242
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
F TS+G++ + G+D+Q+ C+++ LA D RY T A
Sbjct: 243 FPTSDGHLIVAVGNDRQFVKFCELLGRPDLAADARYRTNA 282
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 24/135 (17%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+++ LA D RY T A RV++R+ L E+ A+T + + L + P +N
Sbjct: 263 FCELLGRPDLAADARYRTNADRVQHRDSLTPELAAETGKYERDTLLEKLEASGVPGGPIN 322
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTP------------- 107
+I+ VFAD I ++ + H A + T P VRTP
Sbjct: 323 TIADVFADPQIVHRQMRVDTPHTG-----------AAAGTSPGVRTPIRFSGATLALDRG 371
Query: 108 PPALGEHTDYVLKDL 122
P LGEHT+ VL ++
Sbjct: 372 VPRLGEHTEEVLAEI 386
>gi|400755446|ref|YP_006563814.1| CoA-transferase, family III [Phaeobacter gallaeciensis 2.10]
gi|398654599|gb|AFO88569.1| CoA-transferase, family III [Phaeobacter gallaeciensis 2.10]
Length = 375
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 124/287 (43%), Positives = 180/287 (62%), Gaps = 3/287 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL--NNTELSTY 273
PL+ +++++L RI+AGP+ LADLGAEVIKVE P GD+ R+WGPPF+ + + + Y
Sbjct: 3 PLAGLKVVELARILAGPWIGQSLADLGAEVIKVESP-EGDDTRRWGPPFIERDGDKTAAY 61
Query: 274 FTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQL 333
+ NR K V DF+T +G+Q + +L + D+L+ENF G L + L Y L +N +L
Sbjct: 62 YYAANRGKSCVTADFRTEDGKQTVLELIRDADILIENFKVGGLAKYGLDYDSLKAVNPRL 121
Query: 334 IYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGA 393
IYCSVTGFG GPY R GYD + + GL+ ITG P+G P KVG+A D+ TGLY
Sbjct: 122 IYCSVTGFGQDGPYAARAGYDFLLQGMSGLMSITGAPEGEPQKVGVAITDIVTGLYGTIG 181
Query: 394 VMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFK 453
++AA+ +++TG+GQ ID +LL ++L N NYL G R G H N+ P+QV
Sbjct: 182 ILAAVEQRHRTGRGQHIDMSLLDCATAVLANQNMNYLTTGTSPTRMGNEHPNIAPYQVMA 241
Query: 454 TSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHL 500
+G+V + G+D Q+ +C+V+N+ LA DPR+ + L +A L
Sbjct: 242 VRDGHVILAVGNDGQFARLCEVLNMAGLAADPRFASNQLRVANRGEL 288
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+V+N+ LA DPR+ + LRV NR L + A + + L + + P +N
Sbjct: 260 LCEVLNMAGLAADPRFASNQLRVANRGELTPMLTAALAQWGQADLLAALEAATVPAGPIN 319
Query: 61 SISQVFADEHIQ 72
+I Q F D I+
Sbjct: 320 TIGQAFDDPQIK 331
>gi|397678663|ref|YP_006520198.1| hypothetical protein MYCMA_0425 [Mycobacterium massiliense str. GO
06]
gi|418251516|ref|ZP_12877652.1| putative L-carnitine dehydratase [Mycobacterium abscessus 47J26]
gi|420934949|ref|ZP_15398222.1| L-carnitine dehydrogenase [Mycobacterium massiliense 1S-151-0930]
gi|420938565|ref|ZP_15401834.1| L-carnitine dehydrogenase [Mycobacterium massiliense 1S-152-0914]
gi|420940260|ref|ZP_15403526.1| L-carnitine dehydrogenase [Mycobacterium massiliense 1S-153-0915]
gi|420945695|ref|ZP_15408948.1| L-carnitine dehydrogenase [Mycobacterium massiliense 1S-154-0310]
gi|420950437|ref|ZP_15413684.1| L-carnitine dehydrogenase [Mycobacterium massiliense 2B-0626]
gi|420959426|ref|ZP_15422660.1| L-carnitine dehydrogenase [Mycobacterium massiliense 2B-0107]
gi|420959514|ref|ZP_15422745.1| L-carnitine dehydrogenase [Mycobacterium massiliense 2B-1231]
gi|420995355|ref|ZP_15458501.1| L-carnitine dehydrogenase [Mycobacterium massiliense 2B-0307]
gi|420996409|ref|ZP_15459551.1| L-carnitine dehydrogenase [Mycobacterium massiliense 2B-0912-R]
gi|421000840|ref|ZP_15463973.1| L-carnitine dehydrogenase [Mycobacterium massiliense 2B-0912-S]
gi|353448960|gb|EHB97360.1| putative L-carnitine dehydratase [Mycobacterium abscessus 47J26]
gi|392133361|gb|EIU59106.1| L-carnitine dehydrogenase [Mycobacterium massiliense 1S-151-0930]
gi|392144080|gb|EIU69805.1| L-carnitine dehydrogenase [Mycobacterium massiliense 1S-152-0914]
gi|392156751|gb|EIU82450.1| L-carnitine dehydrogenase [Mycobacterium massiliense 1S-153-0915]
gi|392158903|gb|EIU84599.1| L-carnitine dehydrogenase [Mycobacterium massiliense 1S-154-0310]
gi|392165523|gb|EIU91210.1| L-carnitine dehydrogenase [Mycobacterium massiliense 2B-0626]
gi|392181457|gb|EIV07109.1| L-carnitine dehydrogenase [Mycobacterium massiliense 2B-0307]
gi|392191178|gb|EIV16805.1| L-carnitine dehydrogenase [Mycobacterium massiliense 2B-0912-R]
gi|392202994|gb|EIV28590.1| L-carnitine dehydrogenase [Mycobacterium massiliense 2B-0912-S]
gi|392249152|gb|EIV74628.1| L-carnitine dehydrogenase [Mycobacterium massiliense 2B-0107]
gi|392256726|gb|EIV82180.1| L-carnitine dehydrogenase [Mycobacterium massiliense 2B-1231]
gi|395456928|gb|AFN62591.1| Uncharacterized protein YfdE [Mycobacterium massiliense str. GO 06]
Length = 371
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 116/285 (40%), Positives = 193/285 (67%), Gaps = 2/285 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L + ++D +R++AGP+ TM+L D GAEVIK+E+PV GD+ R+WGPP+ ++ + +TYF
Sbjct: 6 LDGLLVVDFSRVLAGPYATMMLGDFGAEVIKIERPVLGDDTRQWGPPYDSDGQ-ATYFNS 64
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
VNRNK+SV +D +P+GQ ++LA + DV+VENF G +++ LGY+ L ++N LIYC
Sbjct: 65 VNRNKQSVVLDLTSPDGQHRARELAGRADVVVENFRAGTMEKFGLGYQSLKQLNPGLIYC 124
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
++TGFG +G D PGYD++ ++GGL+ +TG P KVG+A +D+ T L+A ++A
Sbjct: 125 AITGFG-RGAGADLPGYDLLVQAVGGLMSVTGPDAAHPSKVGVALVDVLTALHALSGILA 183
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
AL ++ +TG+GQ++D +L+S +S L+N + +L AG+ + G H ++ P+Q F+T++
Sbjct: 184 ALSYRDRTGQGQRVDTDLMSVLLSSLVNQASGFLGAGVVPEALGNRHPSIAPYQTFETAD 243
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
+ I G+DKQ++ + + + + LA D R+ T L + L+
Sbjct: 244 RPIAIAVGNDKQFRLLAQALEMPRLARDDRFATNPLRVRHRGELV 288
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 7/115 (6%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+ + + + LA D R+ T LRV +R L + +E + EK ++W V P +N
Sbjct: 259 LAQALEMPRLARDDRFATNPLRVRHRGELVRVLEQRLREKNADDWYDTLTAVGVPAGPIN 318
Query: 61 SISQV--FADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGE 113
I++ FA+ D+ + S E+ ++ P V+ S T R PP LG+
Sbjct: 319 DIAEAFRFAERIGLDVAVTVPDSPER----QVANP-VSMSETPVVYRNGPPRLGQ 368
>gi|329888340|ref|ZP_08266938.1| coA-transferase family III family protein [Brevundimonas diminuta
ATCC 11568]
gi|328846896|gb|EGF96458.1| coA-transferase family III family protein [Brevundimonas diminuta
ATCC 11568]
Length = 413
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 122/283 (43%), Positives = 181/283 (63%), Gaps = 9/283 (3%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNT-----EL 270
PLS +R+LDLTR++AGPF L DLGA+VIKVE+ GD+ R+ GPP++ + E
Sbjct: 10 PLSGLRVLDLTRVVAGPFAAQTLGDLGADVIKVERKGEGDDVRRVGPPWMKDADGEDLEE 69
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
STYF VNRNK+S+ +DF PEG ++ LA D+L+EN+ PG L R LGY+ L +N
Sbjct: 70 STYFQSVNRNKRSIALDFSVPEGADALRRLAAISDILIENYRPGTLSRYGLGYEDLRAVN 129
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLAT 386
+LIYC+V+GFG GPY +R GYD + +GG++ +TG DG P +VGI +D+
Sbjct: 130 PRLIYCAVSGFGQDGPYAERSGYDYLIQGMGGVMSVTGPRDGEAGAGPVRVGIPLVDIFA 189
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANV 446
G+ A ++AAL H+++TG+GQ +D +L +QVS L+N + +LNAG R G H +
Sbjct: 190 GMNATIGILAALQHRHRTGQGQLVDISLFDSQVSSLLNTASAWLNAGAVLGRTGNDHPSA 249
Query: 447 VPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+ V++ S+G+V I T +D+++ + + DPR+ T
Sbjct: 250 APYGVYEASDGHVIIATFNDREFYRLADALGRSEWRTDPRFAT 292
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 53/124 (42%)
Query: 13 DPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEHIQ 72
DPR+ T RVENR + + + W+ +N++S + D H++
Sbjct: 287 DPRFATNGGRVENRAAIKAAVGDIIRTQPRAFWVETLNAAKVSCGPINAMSDLEHDPHVE 346
Query: 73 DIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETTIAK 132
++ + H G ++ + + S + R PP +GEHT VL LL + +
Sbjct: 347 ARAMIVALDHSSLGSVRTIASPLRLSRSPVAYRRAPPLMGEHTQEVLAGLLGLEPEAMMA 406
Query: 133 LKEK 136
L +K
Sbjct: 407 LSDK 410
>gi|254438321|ref|ZP_05051815.1| CAIB/BAIF family [Octadecabacter antarcticus 307]
gi|198253767|gb|EDY78081.1| CAIB/BAIF family [Octadecabacter antarcticus 307]
Length = 374
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 127/276 (46%), Positives = 174/276 (63%), Gaps = 3/276 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL--NNTELSTY 273
PL +++++L RI+AGP+ LLAD+GAEVIKVE P GD+ R WGPPF + Y
Sbjct: 3 PLGGLKVVELARILAGPWAGQLLADMGAEVIKVEAP-EGDDTRTWGPPFFERGGERSAAY 61
Query: 274 FTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQL 333
F C NR KKSV +DF+T +G+ + L DVL+ENF G L + L Y L + +L
Sbjct: 62 FHCCNRGKKSVVIDFRTADGKVALMRLLADADVLIENFKVGGLAKHGLDYASLRASHPRL 121
Query: 334 IYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGA 393
IYCS+TGFG GPY R GYD I + GL+ +TG P+G P KVG+A D+ TGLYA A
Sbjct: 122 IYCSITGFGQDGPYAARAGYDYIIQGMSGLMSVTGDPNGQPQKVGVAVTDIFTGLYASNA 181
Query: 394 VMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFK 453
++AA+ ++ TG+GQ ID LL V+ N NYL G +R G +H N+VP+QVF+
Sbjct: 182 ILAAVHQRHGTGRGQHIDLALLDVAVATTANQAMNYLATGKSPERLGNAHPNIVPYQVFE 241
Query: 454 TSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
++G+V I G+D Q++ C V+ L +DPR+ T
Sbjct: 242 CADGHVIIAVGNDGQFRKFCSVLGADALGVDPRFAT 277
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 51/118 (43%), Gaps = 5/118 (4%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C V+ L +DPR+ T R+E+ L + K + T + L + P +N
Sbjct: 260 FCSVLGADALGVDPRFATNPARLESCATLVPLLAEKMLGWTKADILTACETKGVPAGPIN 319
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
+ VFAD + + + + + G + V P + +S + P P+LG+ D +
Sbjct: 320 TFEDVFADPQV----IARSLKLDIDGALS-VRPPMRFSDADLALDRPAPSLGQDQDII 372
>gi|402080304|gb|EJT75449.1| formyl-coenzyme A transferase [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 396
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 129/285 (45%), Positives = 181/285 (63%), Gaps = 9/285 (3%)
Query: 225 LTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELS--------TYFTC 276
+TR++AGP+ T +L DLGAEVIK+E PV GD+ R WGPP+ T S YF
Sbjct: 1 MTRVLAGPYSTQILGDLGAEVIKIEHPVRGDDTRAWGPPYAPYTAESKHEGPGESAYFLT 60
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
VNRNKKS+ + ++ P G I+ L +CD+LVEN++PG L + +L Y+ S +N LIY
Sbjct: 61 VNRNKKSLALSYQDPAGIDILHKLIPKCDILVENYLPGTLKKYSLDYETASRLNPGLIYA 120
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S+TG+G GPY +R GYD++ + GL+HITG DGPP KVG+A DL TGLY ++MA
Sbjct: 121 SITGYGQTGPYANRGGYDVMVEAEFGLMHITGTRDGPPVKVGVAVTDLTTGLYTSNSIMA 180
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGI-EGKRWGTSHANVVPHQVFKTS 455
ALL + +TG+GQ ID L Q + L N+ ++ L +G + RWGT+H ++VP++ FKTS
Sbjct: 181 ALLARGRTGRGQHIDVALSDCQTATLANIASSCLISGQKDAGRWGTAHPSIVPYRSFKTS 240
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHL 500
+G V +G G+D + +C + DPRY T A +A L
Sbjct: 241 DGDVILGGGNDALFGKLCDGIGRPEWKADPRYATNASRVAHRDEL 285
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 77/139 (55%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + DPRY T A RV +R+ L IEA T T WL F G PYA VN
Sbjct: 257 LCDGIGRPEWKADPRYATNASRVAHRDELEARIEAVTATMPTRHWLDAFAGSGMPYAAVN 316
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ EH + +V E+ H G +++V V YS ++P VR+ PP LG+HTD VL+
Sbjct: 317 DVQAALRHEHTRARGMVVEVDHPACGPVELVNTPVKYSESRPGVRSAPPTLGQHTDEVLR 376
Query: 121 DLLNYDETTIAKLKEKKIL 139
D+L +D++ I +L+ K ++
Sbjct: 377 DVLGFDDSYIGELRGKGVV 395
>gi|222111581|ref|YP_002553845.1| l-carnitine dehydratase/bile acid-inducible protein f [Acidovorax
ebreus TPSY]
gi|221731025|gb|ACM33845.1| L-carnitine dehydratase/bile acid-inducible protein F [Acidovorax
ebreus TPSY]
Length = 418
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 128/295 (43%), Positives = 185/295 (62%), Gaps = 13/295 (4%)
Query: 208 LSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-- 265
+S+ P L +++LDL+R++AGP+CT +LADLGA+V+KVE+P GD+ R WGPPFL
Sbjct: 1 MSASTPRGALDGIKVLDLSRVLAGPWCTQMLADLGADVVKVERPQAGDDTRHWGPPFLKD 60
Query: 266 ---NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLG 322
+T ++YFT NRNK+S+ VD PEGQ +++ +A + DV+VENF G L + L
Sbjct: 61 DAGRDTREASYFTACNRNKRSITVDMAHPEGQALLRRMAAEADVVVENFKVGGLAQYGLD 120
Query: 323 YKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVG 378
Y L +N +L+YCS+TGFG GPY +R GYD++ ++ GL+ ITGH P G P KVG
Sbjct: 121 YASLKALNPRLVYCSITGFGQDGPYAERAGYDLMVQAMCGLMSITGHADGQPGGGPLKVG 180
Query: 379 IASIDLATGLYAHGAVMAAL----LHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGI 434
+A +D+ TGLYA A++AAL + TG+GQ ID LL +++L N A YL G
Sbjct: 181 VAVVDVFTGLYASNAILAALNARDNARNGTGEGQHIDMALLDVGMAVLANQAAGYLATGQ 240
Query: 435 EGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
R G H ++ P+Q F++ +G V + G+D Q+ C+ A D R+ T
Sbjct: 241 APGRAGNIHPSLAPYQDFRSRDGNVLLAIGNDGQFARFCQACGHPEWAQDARFAT 295
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 6/138 (4%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+ A D R+ T RV++R L +E ++T EW+ + + + P +N
Sbjct: 278 FCQACGHPEWAQDARFATNTARVQHRAALLALMEPVLQTRSTAEWIALLEDKAVPCGPIN 337
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGD----IKIVGPAVAYSLTQPEVRTPPPALGEHTD 116
+I+Q F D ++ + +E+ + GD + V + S T PPALG+HTD
Sbjct: 338 TIAQAFDDPQVRARGIRRELPRDA-GDGIAHVATVANPMRLSGTPVSYHRAPPALGQHTD 396
Query: 117 YVLKDLLNYDETTIAKLK 134
VL++ L D + IA LK
Sbjct: 397 EVLRE-LGLDASAIAALK 413
>gi|121595296|ref|YP_987192.1| L-carnitine dehydratase/bile acid-inducible protein F [Acidovorax
sp. JS42]
gi|120607376|gb|ABM43116.1| L-carnitine dehydratase/bile acid-inducible protein F [Acidovorax
sp. JS42]
Length = 418
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 128/295 (43%), Positives = 185/295 (62%), Gaps = 13/295 (4%)
Query: 208 LSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-- 265
+S+ P L +++LDL+R++AGP+CT +LADLGA+V+KVE+P GD+ R WGPPFL
Sbjct: 1 MSASTPRGALDGIKVLDLSRVLAGPWCTQMLADLGADVVKVERPQAGDDTRHWGPPFLKD 60
Query: 266 ---NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLG 322
+T ++YFT NRNK+S+ VD PEGQ +++ +A + DV+VENF G L + L
Sbjct: 61 DAGRDTREASYFTACNRNKRSITVDMAHPEGQALLRRMAAEADVVVENFKVGGLAQYGLD 120
Query: 323 YKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVG 378
Y L +N +L+YCS+TGFG GPY +R GYD++ ++ GL+ ITGH P G P KVG
Sbjct: 121 YASLKALNPRLVYCSITGFGQDGPYAERAGYDLMVQAMCGLMSITGHADGQPGGGPLKVG 180
Query: 379 IASIDLATGLYAHGAVMAAL----LHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGI 434
+A +D+ TGLYA A++AAL + TG+GQ ID LL +++L N A YL G
Sbjct: 181 VAVVDVFTGLYASNAILAALNARDNARNGTGEGQHIDMALLDVGMAVLANQAAGYLATGQ 240
Query: 435 EGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
R G H ++ P+Q F++ +G V + G+D Q+ C+ A D R+ T
Sbjct: 241 APGRAGNIHPSLAPYQDFRSRDGNVLLAIGNDGQFARFCQACGHPEWAQDARFAT 295
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 6/138 (4%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+ A D R+ T RV++R L +E ++T EW+ + + + P +N
Sbjct: 278 FCQACGHPEWAQDARFATNTARVQHRAALLALMEPVLQTRSTAEWIALLEDKAVPCGPIN 337
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGD----IKIVGPAVAYSLTQPEVRTPPPALGEHTD 116
+I+Q F D ++ + +E+ + GD + V + S T PPALG+HTD
Sbjct: 338 TIAQAFDDPQVRARGIRRELPRDA-GDGIAPMATVANPMRLSGTPVSYHRAPPALGQHTD 396
Query: 117 YVLKDLLNYDETTIAKLK 134
VL++ L D + IA LK
Sbjct: 397 EVLRE-LGLDASAIAALK 413
>gi|116253078|ref|YP_768916.1| L-carnitine dehydrogenase-like protein [Rhizobium leguminosarum bv.
viciae 3841]
gi|115257726|emb|CAK08824.1| Putative L-carnitine dehydrogenase-like protein [Rhizobium
leguminosarum bv. viciae 3841]
Length = 405
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 118/278 (42%), Positives = 177/278 (63%), Gaps = 4/278 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE----LS 271
PL+ +R+++L R++AGP+ +LADLGA+VIKVE P GD+ R+WGPPF+ + +
Sbjct: 10 PLAGIRVIELARVLAGPWAGQMLADLGADVIKVENPDGGDDTRQWGPPFVEGADGENLSA 69
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NR K+SV D K+ EGQ +++ L DV++ENF G L + L Y L ++N
Sbjct: 70 AYYHAANRGKRSVTADLKSAEGQDLVRRLVSTADVVIENFKLGGLVKYGLDYDSLRKVNP 129
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+L+YCS+TGFG GPY GYD I + G + ITG P G P K G+A D+ TG+YA
Sbjct: 130 KLVYCSITGFGQNGPYASLAGYDYIVQGMSGFMSITGEPGGQPMKAGVAIADIFTGIYAV 189
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A+ AAL+H K+G+GQ +D LL Q ++L N NYL +G R G +H N+ P++V
Sbjct: 190 AAIEAALIHALKSGEGQLVDMALLDVQSAVLANQNMNYLVSGEAPTRLGNAHPNISPYEV 249
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
T++GY+ + G+D Q++ +C ++ L+ +A D R+ T
Sbjct: 250 VPTADGYLILAVGNDGQFRRLCTILGLETIASDERFAT 287
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 61/132 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ L+ +A D R+ T RV NR + + + +T++ + L + + P +N
Sbjct: 270 LCTILGLETIASDERFATNKARVGNRGEVRRLVSTETLKWQKADLLKACEENAVPSGAIN 329
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I ++FA +Q L +++ I V V S T P P LGEH +L
Sbjct: 330 TIEEMFAHPQVQARGLRIDLADAAGTVIPGVRTPVVLSETPLRYIRPSPRLGEHQAEILA 389
Query: 121 DLLNYDETTIAK 132
+L ++ + K
Sbjct: 390 ELAEREKGIVVK 401
>gi|225686859|ref|YP_002734831.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella
melitensis ATCC 23457]
gi|256262039|ref|ZP_05464571.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella
melitensis bv. 2 str. 63/9]
gi|225642964|gb|ACO02877.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella
melitensis ATCC 23457]
gi|263091717|gb|EEZ16060.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella
melitensis bv. 2 str. 63/9]
Length = 420
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 124/281 (44%), Positives = 185/281 (65%), Gaps = 3/281 (1%)
Query: 212 NPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELS 271
N +LPL+ +++LDL+R++AGP+ TM LAD+GAEV K+E GD+ R W P N S
Sbjct: 14 NAALPLAGIKVLDLSRVLAGPWATMSLADMGAEVWKIENIQGGDDTRAWSVP--NYKGAS 71
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
TYF C NR KKS+ +D K+ EG +II +LAKQ DV+VENF G ++RL + Y+ L +N
Sbjct: 72 TYFLCANRGKKSLALDLKSREGLEIIHELAKQADVVVENFRSGTVERLKIDYESLKALNP 131
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
++YCS++G+G GP RPGYD + + GL+ ITG DG P ++G+A D+ G+ A
Sbjct: 132 GIVYCSISGYGQTGPEAQRPGYDFVVQAESGLMSITGQIDGEPTRIGVAMTDIVAGMVAT 191
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
+V+AAL + TG GQ ID +L ++ LINVG+ +LN G R+G +H VVP+Q+
Sbjct: 192 QSVLAALYQRKTTGLGQYIDVSLYECALNTLINVGSAHLNGGHVPARFGNAHPTVVPYQI 251
Query: 452 FKTSNGYVTIGTGSDKQYQDMC-KVMNLQHLALDPRYLTGA 491
F+ S+G + G+D+Q+ +C ++++L LA D R+ T +
Sbjct: 252 FECSDGAFALAVGNDRQFAILCERIIDLPELAADERFKTAS 292
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%)
Query: 3 KVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSI 62
++++L LA D R+ T + R NR L + + T + W+ + P QV ++
Sbjct: 275 RIIDLPELAADERFKTASGRALNRAALIPPMAERFRTNTRQHWMSACLKMGVPAGQVKTV 334
Query: 63 SQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDL 122
+ F +++ ++V+++ G I +V PA + PP LGE + VL D
Sbjct: 335 PEAFESPNVKARQVVQKLESAHLGPISLVRPAQGLKAQENAAYKAPPMLGEDSASVLGDA 394
Query: 123 LNYDETTIAKL 133
L D +A L
Sbjct: 395 LGLDGNKLADL 405
>gi|261217657|ref|ZP_05931938.1| acyl-CoA transferase/carnitine dehydratase [Brucella ceti M13/05/1]
gi|261320534|ref|ZP_05959731.1| acyl-CoA transferase/carnitine dehydratase [Brucella ceti
M644/93/1]
gi|260922746|gb|EEX89314.1| acyl-CoA transferase/carnitine dehydratase [Brucella ceti M13/05/1]
gi|261293224|gb|EEX96720.1| acyl-CoA transferase/carnitine dehydratase [Brucella ceti
M644/93/1]
Length = 420
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 124/281 (44%), Positives = 185/281 (65%), Gaps = 3/281 (1%)
Query: 212 NPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELS 271
N +LPL+ +++LDL+R++AGP+ TM LAD+GAEV K+E GD+ R W P N S
Sbjct: 14 NAALPLAGIKVLDLSRVLAGPWATMSLADMGAEVWKIENIQGGDDTRAWSVP--NYKGAS 71
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
TYF C NR KKS+ +D K+ EG +II +LAKQ DV+VENF G ++RL + Y+ L +N
Sbjct: 72 TYFLCANRGKKSLALDLKSREGLEIIHELAKQADVVVENFRSGTVERLKIDYESLKALNP 131
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
++YCS++G+G GP RPGYD + + GL+ ITG DG P ++G+A D+ G+ A
Sbjct: 132 GIVYCSISGYGQTGPEAQRPGYDFVVQAESGLMSITGQIDGEPTRIGVAMTDIVAGMVAT 191
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
+V+AAL + TG GQ ID +L ++ LINVG+ +LN G R+G +H VVP+Q+
Sbjct: 192 QSVLAALYQRKTTGLGQYIDVSLYECALNTLINVGSAHLNGGHVPARFGNAHPTVVPYQI 251
Query: 452 FKTSNGYVTIGTGSDKQYQDMC-KVMNLQHLALDPRYLTGA 491
F+ S+G + G+D+Q+ +C ++++L LA D R+ T +
Sbjct: 252 FECSDGAFALAVGNDRQFAILCERIIDLPELAADERFKTAS 292
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%)
Query: 3 KVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSI 62
++++L LA D R+ T + R NR L + + T + W+ + P QV ++
Sbjct: 275 RIIDLPELAADERFKTASGRALNRAALIPPMAERFRTNTRQHWMSACLKMGVPAGQVKTV 334
Query: 63 SQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDL 122
+ F +++ ++V+++ G I +V PA + PP LGE + VL D+
Sbjct: 335 PEAFESPNVKARQVVQKLESAHLGPISLVRPAQGLKAQENAAYKAPPMLGEDSASVLGDV 394
Query: 123 LNYDETTIAKL 133
L D +A L
Sbjct: 395 LGLDGNKLADL 405
>gi|408380278|ref|ZP_11177863.1| L-carnitine dehydratase [Agrobacterium albertimagni AOL15]
gi|407745845|gb|EKF57376.1| L-carnitine dehydratase [Agrobacterium albertimagni AOL15]
Length = 399
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 121/287 (42%), Positives = 183/287 (63%), Gaps = 5/287 (1%)
Query: 208 LSSENPS-LPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN 266
++S+ PS PL+ +R+++L R++AGP+ +LADLGA+VIKVE P GD+ R WGPPF+
Sbjct: 1 MTSKPPSPAPLTGIRVIELARVLAGPWAGQMLADLGADVIKVENPEGGDDTRAWGPPFVE 60
Query: 267 NTE----LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLG 322
+ + Y+ NRNK+S+ VD KT EGQ+ ++ L DV++ENF G L++ L
Sbjct: 61 GADGENLSAAYYHSTNRNKRSIAVDLKTAEGQETVRRLCATADVVIENFKRGGLEKYGLD 120
Query: 323 YKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASI 382
Y+ L IN +L+YCS+TGFG GPY D GYD I + G + ITG G P K G+A
Sbjct: 121 YESLKAINPKLVYCSITGFGQNGPYADFAGYDYIVQGMSGFMSITGETTGEPMKAGVAIA 180
Query: 383 DLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTS 442
D+ TG+YA A+ AAL+H +TG+GQ +D LL ++L N NYL +G R G +
Sbjct: 181 DIFTGIYAVTAIQAALIHVMRTGQGQFVDMALLDVMSAVLANQNMNYLISGKPPTRLGNA 240
Query: 443 HANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
H N+ P++V T++G++ + G+D Q++ +C ++ + +A D R+ T
Sbjct: 241 HPNISPYEVVPTADGHLILAVGNDGQFKRLCTILGIASVAEDERFAT 287
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 61/129 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ + +A D R+ T RV N+ + + + +T + + L + + P +N
Sbjct: 270 LCTILGIASVAEDERFATNKARVANKLEVRRIVTTETAKWQKRDLLSACEANAVPAGPIN 329
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI ++FAD +Q L +++ +K I V + S T P P +GEH + +L
Sbjct: 330 SIEEMFADPQVQARGLKIDLTDDKGTVIPSVRTPIVLSETPLRYERPSPRIGEHGEDILA 389
Query: 121 DLLNYDETT 129
+L + T
Sbjct: 390 ELAELERKT 398
>gi|159185061|ref|NP_355089.2| L-carnitine dehydratase [Agrobacterium fabrum str. C58]
gi|159140335|gb|AAK87874.2| L-carnitine dehydratase [Agrobacterium fabrum str. C58]
Length = 400
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 118/278 (42%), Positives = 178/278 (64%), Gaps = 4/278 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE----LS 271
PLS +R+++L R++AGP+ +LAD+GA+VIKVE P GD+ R WGPPF+ + + +
Sbjct: 10 PLSGIRVIELARVLAGPWAGQMLADMGADVIKVENPEGGDDTRAWGPPFVESADGENLSA 69
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NR K+S+ D KTPEG +++ L + DV++ENF L + L Y+ L +N
Sbjct: 70 AYYHATNRGKRSIVADLKTPEGCALVRRLVRTADVVIENFKRDGLAKYGLDYESLRVLNP 129
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+LIYCS+TGFG GPY D GYD I + G + ITG PDG P K G+A D+ TG+Y+
Sbjct: 130 KLIYCSITGFGQTGPYADFAGYDYIVQGMSGFMSITGEPDGQPMKAGVAVADIFTGIYSV 189
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A+ AAL+H ++G+GQ ID LL Q ++L N NYL +G R G +H N+ P++V
Sbjct: 190 SAIQAALIHAMRSGEGQHIDMALLDVQSAVLANQNMNYLISGRPPIRLGNAHPNISPYEV 249
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
T++G++ + G+D Q++ +C ++ + +A D RY T
Sbjct: 250 VPTADGFLILAVGNDGQFRRLCNILGIGAIADDERYAT 287
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ + +A D RY T RV ++ + + I +T++ + L + + P +N
Sbjct: 270 LCNILGIGAIADDERYATNKARVAHKVEVRQIISTETLKWNKRDLLTACETNAVPAGPIN 329
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI ++FAD +Q L ++ E I V + S T P P LGEH VL
Sbjct: 330 SIEEMFADPQVQARGLRVDLEAEDGTVIPGVRTPIIMSQTPLRYERPSPKLGEHQAQVLA 389
Query: 121 DLLNYDETT 129
+L + T
Sbjct: 390 ELETIERTA 398
>gi|404446571|ref|ZP_11011678.1| L-carnitine dehydratase/bile acid-inducible protein F
[Mycobacterium vaccae ATCC 25954]
gi|403650257|gb|EJZ05515.1| L-carnitine dehydratase/bile acid-inducible protein F
[Mycobacterium vaccae ATCC 25954]
Length = 373
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 115/279 (41%), Positives = 183/279 (65%), Gaps = 3/279 (1%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L + ++D +R++AGP+ TM+L D GAEV+KVE+P GD+ R+WGPP+ +++ ++TYF
Sbjct: 5 LDGIVVVDFSRVLAGPYATMMLGDFGAEVVKVERPGAGDDTRQWGPPY-DSSGVATYFNA 63
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
VNRNK+SV +D P GQQ +DL D++VENF PG ++RL LGY+ L + +IYC
Sbjct: 64 VNRNKRSVAIDLSDPAGQQTARDLVAGADIVVENFRPGTMERLGLGYEDLRRVRPDVIYC 123
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
++TGFG G PGYD++ ++GGL+ +TG +G P K G+A +D+ GL+A ++A
Sbjct: 124 AITGFGHGG-GAALPGYDLLVQAVGGLMSVTGT-EGQPTKAGVALVDVLAGLHALSGILA 181
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
AL H+ +TG+GQ++D +L S +S ++N + +L AG+ G H ++ P+Q F T++
Sbjct: 182 ALAHRDRTGEGQRVDTDLFSVLLSSMVNQASGFLGAGVVPAMMGNRHPSIAPYQTFDTAD 241
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILA 495
+ + G+D+Q+ + L LA DPR+ T L +A
Sbjct: 242 RPIAVAVGNDRQFTAFSAAIELPELARDPRFATNPLRVA 280
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 45/113 (39%), Gaps = 3/113 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+ L LA DPR+ T LRV NR+ LC +E E W P +N
Sbjct: 257 FSAAIELPELARDPRFATNPLRVANRDALCALLEPALKRHGAEHWYTTLTSAGVPAGPIN 316
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGE 113
+S+ FA + + + + ++ P V S T R PP LG+
Sbjct: 317 DLSEAFA--FAERLGIAATVQVPGSPAPQVANP-VTLSATPVTYRCGPPVLGD 366
>gi|260565153|ref|ZP_05835638.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella
melitensis bv. 1 str. 16M]
gi|384213625|ref|YP_005602708.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella
melitensis M5-90]
gi|384447189|ref|YP_005661407.1| acyl-CoA transferase [Brucella melitensis NI]
gi|260152796|gb|EEW87889.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella
melitensis bv. 1 str. 16M]
gi|326554565|gb|ADZ89204.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella
melitensis M5-90]
gi|349745186|gb|AEQ10728.1| acyl-CoA transferase [Brucella melitensis NI]
Length = 422
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 124/281 (44%), Positives = 185/281 (65%), Gaps = 3/281 (1%)
Query: 212 NPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELS 271
N +LPL+ +++LDL+R++AGP+ TM LAD+GAEV K+E GD+ R W P N S
Sbjct: 16 NAALPLAGIKVLDLSRVLAGPWATMSLADMGAEVWKIENIQGGDDTRAWSVP--NYKGAS 73
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
TYF C NR KKS+ +D K+ EG +II +LAKQ DV+VENF G ++RL + Y+ L +N
Sbjct: 74 TYFLCANRGKKSLALDLKSREGLEIIHELAKQADVVVENFRSGTVERLKIDYESLKALNP 133
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
++YCS++G+G GP RPGYD + + GL+ ITG DG P ++G+A D+ G+ A
Sbjct: 134 GIVYCSISGYGQTGPEAQRPGYDFVVQAESGLMSITGQIDGEPTRIGVAMTDIVAGMVAT 193
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
+V+AAL + TG GQ ID +L ++ LINVG+ +LN G R+G +H VVP+Q+
Sbjct: 194 QSVLAALYQRKTTGLGQYIDVSLYECALNTLINVGSAHLNGGHVPARFGNAHPTVVPYQI 253
Query: 452 FKTSNGYVTIGTGSDKQYQDMC-KVMNLQHLALDPRYLTGA 491
F+ S+G + G+D+Q+ +C ++++L LA D R+ T +
Sbjct: 254 FECSDGAFALAVGNDRQFAILCERIIDLPELAADERFKTAS 294
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%)
Query: 3 KVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSI 62
++++L LA D R+ T + R NR L + + T + W+ + P QV ++
Sbjct: 277 RIIDLPELAADERFKTASGRALNRAALIPPMAERFRTNTRQHWMSACLKMGVPAGQVKTV 336
Query: 63 SQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDL 122
+ F +++ ++V+++ G I +V PA + PP LGE + VL D+
Sbjct: 337 PEAFESPNVKARQVVQKLESAHLGPISLVRPAQGLKAQENAAYKAPPMLGEDSASVLGDV 396
Query: 123 LNYDETTIAKL 133
L D +A L
Sbjct: 397 LGLDGNKLADL 407
>gi|161621125|ref|YP_001595011.1| acyl-CoA transferase [Brucella canis ATCC 23365]
gi|256015840|ref|YP_003105849.1| CAIB/BAIF family protein [Brucella microti CCM 4915]
gi|260567684|ref|ZP_05838153.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella
suis bv. 4 str. 40]
gi|261220880|ref|ZP_05935161.1| acyl-CoA transferase/carnitine dehydratase [Brucella ceti B1/94]
gi|261318272|ref|ZP_05957469.1| acyl-CoA transferase/carnitine dehydratase [Brucella pinnipedialis
B2/94]
gi|261754015|ref|ZP_05997724.1| acyl-CoA transferase/carnitine dehydratase [Brucella suis bv. 3
str. 686]
gi|261757293|ref|ZP_06001002.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella sp.
F5/99]
gi|265986070|ref|ZP_06098627.1| acyl-CoA transferase/carnitine dehydratase [Brucella pinnipedialis
M292/94/1]
gi|265990393|ref|ZP_06102950.1| acyl-CoA transferase/carnitine dehydratase [Brucella melitensis bv.
1 str. Rev.1]
gi|265992530|ref|ZP_06105087.1| acyl-CoA transferase/carnitine dehydratase [Brucella melitensis bv.
3 str. Ether]
gi|265995764|ref|ZP_06108321.1| acyl-CoA transferase/carnitine dehydratase [Brucella ceti
M490/95/1]
gi|340792838|ref|YP_004758302.1| CaiB/BaiF family protein [Brucella pinnipedialis B2/94]
gi|384410729|ref|YP_005599349.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella
melitensis M28]
gi|161337936|gb|ABX64240.1| Protein C7orf10 [Brucella canis ATCC 23365]
gi|255998500|gb|ACU50187.1| CAIB/BAIF family protein [Brucella microti CCM 4915]
gi|260154349|gb|EEW89430.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella
suis bv. 4 str. 40]
gi|260919464|gb|EEX86117.1| acyl-CoA transferase/carnitine dehydratase [Brucella ceti B1/94]
gi|261297495|gb|EEY00992.1| acyl-CoA transferase/carnitine dehydratase [Brucella pinnipedialis
B2/94]
gi|261737277|gb|EEY25273.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella sp.
F5/99]
gi|261743768|gb|EEY31694.1| acyl-CoA transferase/carnitine dehydratase [Brucella suis bv. 3
str. 686]
gi|262550061|gb|EEZ06222.1| acyl-CoA transferase/carnitine dehydratase [Brucella ceti
M490/95/1]
gi|262763400|gb|EEZ09432.1| acyl-CoA transferase/carnitine dehydratase [Brucella melitensis bv.
3 str. Ether]
gi|263001062|gb|EEZ13752.1| acyl-CoA transferase/carnitine dehydratase [Brucella melitensis bv.
1 str. Rev.1]
gi|264658267|gb|EEZ28528.1| acyl-CoA transferase/carnitine dehydratase [Brucella pinnipedialis
M292/94/1]
gi|326411276|gb|ADZ68340.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella
melitensis M28]
gi|340561297|gb|AEK56534.1| CaiB/BaiF family protein [Brucella pinnipedialis B2/94]
Length = 420
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 124/281 (44%), Positives = 185/281 (65%), Gaps = 3/281 (1%)
Query: 212 NPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELS 271
N +LPL+ +++LDL+R++AGP+ TM LAD+GAEV K+E GD+ R W P N S
Sbjct: 14 NAALPLAGIKVLDLSRVLAGPWATMSLADMGAEVWKIENIQGGDDTRAWSVP--NYKGAS 71
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
TYF C NR KKS+ +D K+ EG +II +LAKQ DV+VENF G ++RL + Y+ L +N
Sbjct: 72 TYFLCANRGKKSLALDLKSREGLEIIHELAKQADVVVENFRSGTVERLKIDYESLKALNP 131
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
++YCS++G+G GP RPGYD + + GL+ ITG DG P ++G+A D+ G+ A
Sbjct: 132 GIVYCSISGYGQTGPEAQRPGYDFVVQAESGLMSITGQIDGEPTRIGVAMTDIVAGMVAT 191
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
+V+AAL + TG GQ ID +L ++ LINVG+ +LN G R+G +H VVP+Q+
Sbjct: 192 QSVLAALYQRKTTGLGQYIDVSLYECALNTLINVGSAHLNGGHVPARFGNAHPTVVPYQI 251
Query: 452 FKTSNGYVTIGTGSDKQYQDMC-KVMNLQHLALDPRYLTGA 491
F+ S+G + G+D+Q+ +C ++++L LA D R+ T +
Sbjct: 252 FECSDGAFALAVGNDRQFAILCERIIDLPELAADERFKTAS 292
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%)
Query: 3 KVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSI 62
++++L LA D R+ T + R NR L + + T + W+ + P QV ++
Sbjct: 275 RIIDLPELAADERFKTASGRALNRAALIPPMAERFRTNTRQHWMSACLKMGVPAGQVKTV 334
Query: 63 SQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDL 122
+ F +++ ++V+++ G I +V PA + PP LGE + VL D+
Sbjct: 335 PEAFESPNVKARQVVQKLESAHLGPISLVRPAQGLKAQENAAYKAPPMLGEDSASVLGDV 394
Query: 123 LNYDETTIAKL 133
L D +A L
Sbjct: 395 LGLDGNKLADL 405
>gi|163845188|ref|YP_001622843.1| hypothetical protein BSUIS_B1073 [Brucella suis ATCC 23445]
gi|163675911|gb|ABY40021.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
Length = 420
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 124/281 (44%), Positives = 185/281 (65%), Gaps = 3/281 (1%)
Query: 212 NPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELS 271
N +LPL+ +++LDL+R++AGP+ TM LAD+GAEV K+E GD+ R W P N S
Sbjct: 14 NAALPLAGIKVLDLSRVLAGPWATMSLADMGAEVWKIENIQGGDDTRAWSVP--NYKGAS 71
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
TYF C NR KKS+ +D K+ EG +II +LAKQ DV+VENF G ++RL + Y+ L +N
Sbjct: 72 TYFLCANRGKKSLALDLKSREGLEIIHELAKQADVVVENFRSGTVERLKIDYESLKALNP 131
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
++YCS++G+G GP RPGYD + + GL+ ITG DG P ++G+A D+ G+ A
Sbjct: 132 GIVYCSISGYGQTGPEAQRPGYDFVVQAESGLMSITGQIDGEPTRIGVAMTDIVAGMVAT 191
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
+V+AAL + TG GQ ID +L ++ LINVG+ +LN G R+G +H VVP+Q+
Sbjct: 192 QSVLAALYQRKTTGLGQYIDVSLYECALNTLINVGSAHLNGGHVPARFGNAHPTVVPYQI 251
Query: 452 FKTSNGYVTIGTGSDKQYQDMC-KVMNLQHLALDPRYLTGA 491
F+ S+G + G+D+Q+ +C ++++L LA D R+ T +
Sbjct: 252 FECSDGAFALAVGNDRQFAILCERIIDLPELAADERFKTAS 292
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%)
Query: 3 KVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSI 62
++++L LA D R+ T + R NR L + + T + W+ + P QV ++
Sbjct: 275 RIIDLPELAADERFKTASGRALNRAALIPPMVERFRTNTRQHWMSACLKMGVPAGQVKTV 334
Query: 63 SQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDL 122
+ F +++ ++V+++ G I +V PA + PP LGE + VL D+
Sbjct: 335 PEAFESPNVKARQVVQKLESAHLGPISLVRPAQGLKAQENAAYKAPPMLGEDSASVLGDV 394
Query: 123 LNYDETTIAKL 133
L D +A L
Sbjct: 395 LGLDGNKLADL 405
>gi|335033328|ref|ZP_08526696.1| L-carnitine dehydratase [Agrobacterium sp. ATCC 31749]
gi|333795266|gb|EGL66595.1| L-carnitine dehydratase [Agrobacterium sp. ATCC 31749]
Length = 419
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 118/278 (42%), Positives = 178/278 (64%), Gaps = 4/278 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE----LS 271
PLS +R+++L R++AGP+ +LAD+GA+VIKVE P GD+ R WGPPF+ + + +
Sbjct: 29 PLSGIRVIELARVLAGPWAGQMLADMGADVIKVENPEGGDDTRAWGPPFVESADGENLSA 88
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NR K+S+ D KTPEG +++ L + DV++ENF L + L Y+ L +N
Sbjct: 89 AYYHATNRGKRSIVADLKTPEGCALVRRLVRTADVVIENFKRDGLAKYGLDYESLRVLNP 148
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+LIYCS+TGFG GPY D GYD I + G + ITG PDG P K G+A D+ TG+Y+
Sbjct: 149 KLIYCSITGFGQTGPYADFAGYDYIVQGMSGFMSITGEPDGQPMKAGVAVADIFTGIYSV 208
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A+ AAL+H ++G+GQ ID LL Q ++L N NYL +G R G +H N+ P++V
Sbjct: 209 SAIQAALIHAMRSGEGQHIDMALLDVQSAVLANQNMNYLISGRPPIRLGNAHPNISPYEV 268
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
T++G++ + G+D Q++ +C ++ + +A D RY T
Sbjct: 269 VPTADGFLILAVGNDGQFRRLCNILGIGAIADDERYAT 306
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ + +A D RY T RV ++ + + I +T++ + L + + P +N
Sbjct: 289 LCNILGIGAIADDERYATNKARVAHKVEVRQIISTETLKWNKRDLLTACETNAVPAGPIN 348
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI ++FAD +Q L ++ E I V + S T P P LGEH VL
Sbjct: 349 SIEEMFADPQVQARGLRVDLEAEDGTVIPGVRTPIIMSQTPLRYERPSPKLGEHQAQVLA 408
Query: 121 DLLNYDETT 129
+L + T
Sbjct: 409 ELETIERTA 417
>gi|99081372|ref|YP_613526.1| L-carnitine dehydratase/bile acid-inducible protein F [Ruegeria sp.
TM1040]
gi|99037652|gb|ABF64264.1| L-carnitine dehydratase/bile acid-inducible protein F [Ruegeria sp.
TM1040]
Length = 400
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 121/278 (43%), Positives = 180/278 (64%), Gaps = 1/278 (0%)
Query: 213 PSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTG-DECRKWGPPFLNNTELS 271
P L V++LDL+RI+AGP T LL DLGA+VIKVE P TG D+ R+WG + +L+
Sbjct: 14 PHGALKGVKVLDLSRILAGPTATQLLGDLGADVIKVENPTTGGDDTRQWGKSVAEDADLT 73
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NRNK+S+ +D PEGQ II+ LA Q DVL+ENF PG L + L Y L E
Sbjct: 74 PYFMAANRNKRSLALDISAPEGQAIIRRLAAQADVLIENFKPGGLAKYGLDYASLRESCP 133
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
L+Y S++G+G GP + +PGYD++A GG++ +TG P+G P KVG+ D+ G+YA
Sbjct: 134 HLVYASISGYGQTGPNRAKPGYDLMAQGYGGIMSLTGDPEGAPVKVGVGIADVMCGMYAT 193
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
+++AL H+ TG+GQ+++ L+ Q++ LIN G +YLN G + R G H +++P+
Sbjct: 194 IGILSALRHRDLTGEGQQVELALVDAQIAWLINEGVSYLNTGQKPVRRGNEHPSIMPYGT 253
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
++T +G+V + G+D Q++ + L+ LA DPR+ T
Sbjct: 254 YETRDGHVILAVGNDSQFRRFMAFLALEGLAEDPRFAT 291
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 5/117 (4%)
Query: 5 MNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQ 64
+ L+ LA DPR+ T R+E+R L + T+E + + P V ++ Q
Sbjct: 278 LALEGLAEDPRFATNPARLEHRGALNDILIPALQRYRTDEVIAAMEAAKVPVGPVKTLDQ 337
Query: 65 VFADEHIQDIKLVKEISHEKYGD--IKIVGPAVAYSLTQPEVRTPPPALGEHTDYVL 119
VF + + +V + + GD ++++G + +S T R PP G + +L
Sbjct: 338 VFETDQVAARDMVVTM---QAGDTEVRLLGNPLKFSRTPVTYRKAPPRCGADSTEIL 391
>gi|414583030|ref|ZP_11440170.1| L-carnitine dehydrogenase [Mycobacterium abscessus 5S-1215]
gi|420879899|ref|ZP_15343266.1| L-carnitine dehydrogenase [Mycobacterium abscessus 5S-0304]
gi|420885901|ref|ZP_15349261.1| L-carnitine dehydrogenase [Mycobacterium abscessus 5S-0421]
gi|420887513|ref|ZP_15350870.1| L-carnitine dehydrogenase [Mycobacterium abscessus 5S-0422]
gi|420892565|ref|ZP_15355909.1| L-carnitine dehydrogenase [Mycobacterium abscessus 5S-0708]
gi|420902393|ref|ZP_15365724.1| L-carnitine dehydrogenase [Mycobacterium abscessus 5S-0817]
gi|420903402|ref|ZP_15366725.1| L-carnitine dehydrogenase [Mycobacterium abscessus 5S-1212]
gi|420970026|ref|ZP_15433227.1| L-carnitine dehydrogenase [Mycobacterium abscessus 5S-0921]
gi|392081664|gb|EIU07490.1| L-carnitine dehydrogenase [Mycobacterium abscessus 5S-0421]
gi|392084808|gb|EIU10633.1| L-carnitine dehydrogenase [Mycobacterium abscessus 5S-0304]
gi|392093637|gb|EIU19434.1| L-carnitine dehydrogenase [Mycobacterium abscessus 5S-0422]
gi|392099754|gb|EIU25548.1| L-carnitine dehydrogenase [Mycobacterium abscessus 5S-0817]
gi|392108446|gb|EIU34226.1| L-carnitine dehydrogenase [Mycobacterium abscessus 5S-0708]
gi|392109947|gb|EIU35720.1| L-carnitine dehydrogenase [Mycobacterium abscessus 5S-1212]
gi|392118182|gb|EIU43950.1| L-carnitine dehydrogenase [Mycobacterium abscessus 5S-1215]
gi|392175964|gb|EIV01625.1| L-carnitine dehydrogenase [Mycobacterium abscessus 5S-0921]
Length = 371
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 116/285 (40%), Positives = 193/285 (67%), Gaps = 2/285 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L + ++D +R++AGP+ TM+L D GAEVIK+E+PV GD+ R+WGPP+ ++ + +TYF
Sbjct: 6 LDGLLVVDFSRVLAGPYATMMLGDFGAEVIKIERPVLGDDTRQWGPPYDSDGQ-ATYFNS 64
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
VNRNK+SV +D +P+GQ ++LA + DV+VENF G +++ LGY+ L ++N LIYC
Sbjct: 65 VNRNKQSVVLDLTSPDGQYRARELAGRADVVVENFRAGTMEKFGLGYQSLKQLNPGLIYC 124
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
++TGFG +G D PGYD++ ++GGL+ +TG P KVG+A +D+ T L+A ++A
Sbjct: 125 AITGFG-RGAGADLPGYDLLVQAVGGLMSVTGPDAAHPSKVGVALVDVLTALHALSGILA 183
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
AL ++ +TG+GQ++D +L+S +S L+N + +L AG+ + G H ++ P+Q F+T++
Sbjct: 184 ALSYRDRTGQGQRVDTDLMSVLLSSLVNQASGFLGAGVVPEALGNRHPSIAPYQTFETAD 243
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
+ I G+DKQ++ + + + + LA D R+ T L + L+
Sbjct: 244 RPIAIAVGNDKQFRLLAQALEMPRLARDDRFATNPLRVRHRGELV 288
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 7/115 (6%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+ + + + LA D R+ T LRV +R L + +E + EK ++W V P +N
Sbjct: 259 LAQALEMPRLARDDRFATNPLRVRHRGELVRVLEQRLREKNADDWYDTLTAVGVPAGPIN 318
Query: 61 SISQV--FADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGE 113
I++ FA+ D+ + S E+ ++ P V+ S T R PP LG+
Sbjct: 319 DIAEAFRFAERIGLDVAVTVPDSPER----QVANP-VSMSETPVVYRNGPPRLGQ 368
>gi|221065702|ref|ZP_03541807.1| L-carnitine dehydratase/bile acid-inducible protein F [Comamonas
testosteroni KF-1]
gi|220710725|gb|EED66093.1| L-carnitine dehydratase/bile acid-inducible protein F [Comamonas
testosteroni KF-1]
Length = 420
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 127/294 (43%), Positives = 190/294 (64%), Gaps = 13/294 (4%)
Query: 209 SSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL--- 265
S+ P+ L+ +++LDL+R++AGP+ T +LADLGA+V+KVE+P+ GD+ R WGPPFL
Sbjct: 4 STTTPTGALAGIKVLDLSRVLAGPWATQMLADLGADVVKVERPLVGDDTRHWGPPFLRDD 63
Query: 266 --NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGY 323
N+T ++YFT NRNK+S+ VD PEG+ +++ +A++ DV+VENF G L + L Y
Sbjct: 64 AGNDTREASYFTACNRNKRSITVDMAHPEGRALLQRMAQEADVVVENFKTGGLAQYGLDY 123
Query: 324 KHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGI 379
+ L +N +L+YCS+TGFG GPY +R GYD++ ++ GL+ ITGH P G P KVG+
Sbjct: 124 ESLKVLNPRLVYCSITGFGQDGPYAERAGYDLMVQAMCGLMSITGHADGEPGGGPLKVGV 183
Query: 380 ASIDLATGLYAHGAVMAAL----LHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIE 435
A ID+ TGLYA A++AAL + +G+GQ ID LL +++L N A +L G
Sbjct: 184 AVIDVFTGLYASNAILAALNARDNARNGSGQGQYIDMALLDVGMAVLANQAAGFLATGQA 243
Query: 436 GKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
R G +H ++ P+Q F T +G V + G+D Q+ C + + A D R+ T
Sbjct: 244 PGRAGNTHPSLAPYQDFPTLDGNVLLAIGNDGQFARFCAAIGEEAWAQDARFAT 297
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 3/125 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C + + A D R+ T RV NR L + ++ + +++T +W+ + + + P +N
Sbjct: 280 FCAAIGEEAWAQDARFATNTARVRNRAALLELMKPQMRQRSTADWIALLEDKAVPCGPIN 339
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIK---IVGPAVAYSLTQPEVRTPPPALGEHTDY 117
+I+Q F D ++ + K + DI V + S T R PPALG+HTD
Sbjct: 340 TIAQAFDDPQVKARGIHKTLPSSAGHDISAMATVASPMRLSATPVTYRNAPPALGQHTDE 399
Query: 118 VLKDL 122
VL +L
Sbjct: 400 VLLEL 404
>gi|121608700|ref|YP_996507.1| formyl-CoA transferase [Verminephrobacter eiseniae EF01-2]
gi|121553340|gb|ABM57489.1| Formyl-CoA transferase [Verminephrobacter eiseniae EF01-2]
Length = 448
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 123/282 (43%), Positives = 182/282 (64%), Gaps = 9/282 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
L+ +++LDL+R++AGP+CT +LADLGA+V+KVE+P GD+ R WGPPFL N+T +
Sbjct: 44 LAGIKVLDLSRVLAGPWCTQILADLGADVVKVERPGAGDDTRHWGPPFLRDAAGNDTAQA 103
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+YFT NRNK+SV +D + +GQ +I+ +A+Q D++VENF G L L L +N
Sbjct: 104 SYFTACNRNKRSVTIDLASADGQALIRQMAQQADIVVENFKVGGLAHYGLDQATLRALNP 163
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
+LIYCS+TGFG GPY +R GYD++ ++ G++ ITG P G P +VG+A DL TG
Sbjct: 164 RLIYCSITGFGQDGPYAERAGYDLMIQAMSGMMSITGRSDGEPGGGPLRVGVALTDLFTG 223
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA A++AAL ++ +G+GQ ID +LL +++L N A +L G R G SH +VV
Sbjct: 224 VYASSAILAALNWRHTSGQGQHIDMSLLDVGMAILANQAAGFLATGQAPTRQGNSHPSVV 283
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+Q F T +G + + G+D Q+ C A D R+ +
Sbjct: 284 PYQDFPTQDGAMLLAIGNDDQFARFCAAAGQPQWASDARFAS 325
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 3/125 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C A D R+ + RV +R L ++A T ++T +W+ + Q + P +N
Sbjct: 308 FCAAAGQPQWASDARFASNTARVRHRADLIPAMQAVTRTRSTADWIELLQDKAVPCGPIN 367
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVA---YSLTQPEVRTPPPALGEHTDY 117
+I+Q F D ++ L ++ I+ +G + S P + PPALG+HTD
Sbjct: 368 TIAQAFDDAQVKARGLRVQLPRSAGDGIEHIGGVASPLRLSAHPPVLHHAPPALGQHTDE 427
Query: 118 VLKDL 122
VL +L
Sbjct: 428 VLAEL 432
>gi|67527977|ref|XP_661834.1| hypothetical protein AN4230.2 [Aspergillus nidulans FGSC A4]
gi|40740139|gb|EAA59329.1| hypothetical protein AN4230.2 [Aspergillus nidulans FGSC A4]
gi|259481161|tpe|CBF74436.1| TPA: CAIB/BAIF family enzyme (AFU_orthologue; AFUA_1G06250)
[Aspergillus nidulans FGSC A4]
Length = 446
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 133/297 (44%), Positives = 188/297 (63%), Gaps = 13/297 (4%)
Query: 201 FYSLDLALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKW 260
+ S L + +LPL +R+LD+TR++AG +L DLGAEVIKVE PV GD+ R W
Sbjct: 33 WRSYSSPLPPADGTLPLQGIRVLDMTRVLAG-----ILGDLGAEVIKVEHPVRGDDTRAW 87
Query: 261 GPPFL---NNTEL----STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVP 313
GPP+ N+++ S Y+ VNRNKKS+ + F G I+ L K+CDVLVEN++P
Sbjct: 88 GPPYAKYANDSKEGPGESAYYLAVNRNKKSIGLSFAHKSGVDILHKLVKECDVLVENYLP 147
Query: 314 GKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP 373
G L + N+ Y+ L EIN LIY S+TG+G GPY +R GYD++ + GL+HITG G
Sbjct: 148 GSLKKYNMDYETLREINPSLIYASITGYGQTGPYSNRAGYDVMVEAEMGLMHITGSRGGD 207
Query: 374 PCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAG 433
P KVG+A DL TGLY A+MAALL + +TGKGQ ID L QV+ L N+ ++ L +G
Sbjct: 208 PVKVGVAVTDLTTGLYTSNAIMAALLARVRTGKGQHIDACLSDCQVATLSNIASSALISG 267
Query: 434 I-EGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+ RWGT H ++VP++ ++T +G + G G+D+ + +C + DPR+LT
Sbjct: 268 QKDSGRWGTEHPSIVPYRSYQTLDGDILFGGGNDRLFGVLCDRLGHPEWKEDPRFLT 324
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 80/139 (57%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + DPR+LT RV++R ++ IE +KTT++WL I +G PYA VN
Sbjct: 307 LCDRLGHPEWKEDPRFLTNRDRVKHRAVIDGLIEDCVKQKTTQQWLEIMEGSGMPYAAVN 366
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I EH++ +V EI H G +K+V + YS P VRTPPP LG+HTD VL
Sbjct: 367 DIQGTLNHEHVRARGMVTEIDHPACGPVKLVNTPIKYSHATPGVRTPPPTLGQHTDEVLG 426
Query: 121 DLLNYDETTIAKLKEKKIL 139
+LL Y E I++LK+ ++
Sbjct: 427 ELLQYGEKQISQLKQDGVV 445
>gi|254453604|ref|ZP_05067041.1| L-carnitine dehydratase/bile acid-inducible protein F
[Octadecabacter arcticus 238]
gi|198268010|gb|EDY92280.1| L-carnitine dehydratase/bile acid-inducible protein F
[Octadecabacter arcticus 238]
Length = 374
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 174/276 (63%), Gaps = 3/276 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL--NNTELSTY 273
PL+ +++++L RI+AGP+ LLAD+GAEVIKVE P GD+ R WGPPF+ + Y
Sbjct: 3 PLAGLKVVELARILAGPWAGQLLADMGAEVIKVEAP-EGDDTRTWGPPFIEHGGERSAAY 61
Query: 274 FTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQL 333
F NR KKSV +DF+T EG+ + L DVL+ENF G L + L Y L E + +L
Sbjct: 62 FHGCNRGKKSVVIDFRTDEGKAALLRLLVDADVLIENFKVGGLAKYGLDYASLRESHPRL 121
Query: 334 IYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGA 393
IYCS+TGFG GPY R GYD I + GL+ +TG PDG P KVG+A D+ TGLYA A
Sbjct: 122 IYCSITGFGQDGPYAARAGYDYIIQGMSGLMSVTGDPDGQPQKVGVAVTDIFTGLYASNA 181
Query: 394 VMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFK 453
++AA+ ++ T +GQ ID LL V+ N NYL G +R G +H N+VP+QVF+
Sbjct: 182 ILAAVHQRHGTERGQHIDLALLDVAVATTANQAMNYLATGKSPERLGNAHPNIVPYQVFE 241
Query: 454 TSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+G+V I G+D Q++ C V+ L L DPR+ T
Sbjct: 242 CGDGHVIIAVGNDGQFRKFCSVLGLDALGTDPRFAT 277
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 5/118 (4%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C V+ L L DPR+ T R++NR +L + K + T + L + P +N
Sbjct: 260 FCSVLGLDALGTDPRFATNPARLKNRSVLVPLLADKMLYWTKADILTTCETKGVPAGPIN 319
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
+ VFAD + + + + + +G + V P + +S + P P+LG+ D +
Sbjct: 320 TFEDVFADPQV----IARGLKLDIHGALS-VRPPMRFSDADLALDRPAPSLGQDQDII 372
>gi|222086473|ref|YP_002545007.1| acyl-CoA transferases/L-carnitine dehydratase [Agrobacterium
radiobacter K84]
gi|221723921|gb|ACM27077.1| acyl-CoA transferases/L-carnitine dehydratase protein
[Agrobacterium radiobacter K84]
Length = 400
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 121/278 (43%), Positives = 178/278 (64%), Gaps = 4/278 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE----LS 271
PL+ +R+++L R++AGP+ +LADLGA+VIKVE P GD+ R+WGPPF+ + +
Sbjct: 10 PLTGIRVIELARVLAGPWAGQMLADLGADVIKVENPDGGDDTRQWGPPFVEGKDGENLSA 69
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NR K+SV D +T EGQ++++ L DV++ENF G L + L Y+ L +IN
Sbjct: 70 AYYHSTNRGKRSVIADLRTEEGQELVRRLVLTADVVIENFKLGGLVKYGLDYESLRKINP 129
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+L+YCS+TGFG GPY GYD I + G + ITG PDG P K G+A D+ TG+YA
Sbjct: 130 KLVYCSITGFGQTGPYAGLAGYDYIVQGMSGFMSITGEPDGQPMKAGVAIADIFTGIYAV 189
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A+ AAL+H KTG+GQ +D LL Q ++L N NYL +G R G +H N+ P++V
Sbjct: 190 SAIEAALIHALKTGEGQLVDMALLDVQSAVLANQNMNYLISGKAPVRLGNAHPNISPYEV 249
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
T++GY+ + G+D Q++ +C ++ + A D RY T
Sbjct: 250 VPTADGYLILAIGNDGQFRRLCAILGIDSHADDERYAT 287
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 54/122 (44%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ + A D RY T RV +R + I AKT+ + L + + P +N
Sbjct: 270 LCAILGIDSHADDERYATNKARVAHRHDVRAFISAKTLTWNKADLLKACEDNAVPAGAIN 329
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I +FAD I+ L ++ I V V S T P P LGEH + VL
Sbjct: 330 TIEDMFADPQIKARGLRIDLEDAVGTVIPSVRTPVVLSETPLTYTRPSPRLGEHQEEVLA 389
Query: 121 DL 122
+L
Sbjct: 390 EL 391
>gi|241205587|ref|YP_002976683.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240859477|gb|ACS57144.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 400
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 119/278 (42%), Positives = 176/278 (63%), Gaps = 4/278 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE----LS 271
PL+ +R+++L R++AGP+ +LADLGA+VIKVE P GD+ R+WGPPF+ + +
Sbjct: 10 PLAGIRVIELARVLAGPWAGQMLADLGADVIKVENPDAGDDTRQWGPPFVEGADGENLSA 69
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NR K+SV D K+ EGQ +++ L DV++ENF G L + L Y L + N
Sbjct: 70 AYYHAANRGKRSVTADLKSAEGQDLVRRLVSTADVVIENFKVGGLVKYGLDYDSLRKENP 129
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+L+YCS+TGFG GPY GYD I + G + ITG P G P K G+A D+ TG+YA
Sbjct: 130 KLVYCSITGFGQNGPYASLAGYDYIVQGMSGFMSITGEPGGQPMKAGVAIADIFTGIYAV 189
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A+ AAL+H KTG+GQ +D LL Q ++L N NYL +G R G +H N+ P++V
Sbjct: 190 SAIEAALIHTLKTGEGQLVDMALLDVQSAVLANQNMNYLVSGEAPTRLGNAHPNISPYEV 249
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
T++GY+ + G+D Q++ +C ++ L+ +A D R+ T
Sbjct: 250 VPTADGYLILAVGNDGQFRRLCTILGLETIASDERFAT 287
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 58/122 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ L+ +A D R+ T RV NR + + + +T++ + L + + P +N
Sbjct: 270 LCTILGLETIASDERFATNKARVGNRGEVRRLVSTETLKWQKADLLKACEENAVPSGAIN 329
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I ++FA +Q L +++ I V V S T TP P LGEH +L
Sbjct: 330 TIEEMFAHPQVQARGLRIDLADSAGTVIPGVRTPVVLSETPLRYITPSPRLGEHQAEILA 389
Query: 121 DL 122
+L
Sbjct: 390 EL 391
>gi|17988568|ref|NP_541201.1| formyl-coenzyme A transferase [Brucella melitensis bv. 1 str. 16M]
gi|225629556|ref|ZP_03787589.1| transcriptional regulator, GntR family protein [Brucella ceti str.
Cudo]
gi|17984366|gb|AAL53465.1| formyl-coenzyme a transferase [Brucella melitensis bv. 1 str. 16M]
gi|225616052|gb|EEH13101.1| transcriptional regulator, GntR family protein [Brucella ceti str.
Cudo]
Length = 454
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 124/281 (44%), Positives = 185/281 (65%), Gaps = 3/281 (1%)
Query: 212 NPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELS 271
N +LPL+ +++LDL+R++AGP+ TM LAD+GAEV K+E GD+ R W P N S
Sbjct: 48 NAALPLAGIKVLDLSRVLAGPWATMSLADMGAEVWKIENIQGGDDTRAWSVP--NYKGAS 105
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
TYF C NR KKS+ +D K+ EG +II +LAKQ DV+VENF G ++RL + Y+ L +N
Sbjct: 106 TYFLCANRGKKSLALDLKSREGLEIIHELAKQADVVVENFRSGTVERLKIDYESLKALNP 165
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
++YCS++G+G GP RPGYD + + GL+ ITG DG P ++G+A D+ G+ A
Sbjct: 166 GIVYCSISGYGQTGPEAQRPGYDFVVQAESGLMSITGQIDGEPTRIGVAMTDIVAGMVAT 225
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
+V+AAL + TG GQ ID +L ++ LINVG+ +LN G R+G +H VVP+Q+
Sbjct: 226 QSVLAALYQRKTTGLGQYIDVSLYECALNTLINVGSAHLNGGHVPARFGNAHPTVVPYQI 285
Query: 452 FKTSNGYVTIGTGSDKQYQDMC-KVMNLQHLALDPRYLTGA 491
F+ S+G + G+D+Q+ +C ++++L LA D R+ T +
Sbjct: 286 FECSDGAFALAVGNDRQFAILCERIIDLPELAADERFKTAS 326
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%)
Query: 3 KVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSI 62
++++L LA D R+ T + R NR L + + T + W+ + P QV ++
Sbjct: 309 RIIDLPELAADERFKTASGRALNRAALIPPMAERFRTNTRQHWMSACLKMGVPAGQVKTV 368
Query: 63 SQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDL 122
+ F +++ ++V+++ G I +V PA + PP LGE + VL D+
Sbjct: 369 PEAFESPNVKARQVVQKLESAHLGPISLVRPAQGLKAQENAAYKAPPMLGEDSASVLGDV 428
Query: 123 LNYDETTIAKL 133
L D +A L
Sbjct: 429 LGLDGNKLADL 439
>gi|339627613|ref|YP_004719256.1| L-carnitine dehydratase/bile acid-inducible protein F
[Sulfobacillus acidophilus TPY]
gi|379008019|ref|YP_005257470.1| formyl-CoA transferase [Sulfobacillus acidophilus DSM 10332]
gi|339285402|gb|AEJ39513.1| L-carnitine dehydratase/bile acid-inducible protein F
[Sulfobacillus acidophilus TPY]
gi|361054281|gb|AEW05798.1| Formyl-CoA transferase [Sulfobacillus acidophilus DSM 10332]
Length = 394
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 124/280 (44%), Positives = 181/280 (64%), Gaps = 3/280 (1%)
Query: 212 NPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELS 271
N S L ++ I+DLTRI++GP+CT+ AD GA VIK+E P GD+ R+WGPPF++ S
Sbjct: 2 NSSRLLQDLVIVDLTRILSGPYCTLYFADWGATVIKIEPP-GGDDTRRWGPPFIDGE--S 58
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF VNRNKKSV +D KT EG+Q ++DL Q DV+VENF PG LDR LGY+ L +NS
Sbjct: 59 AYFLSVNRNKKSVVLDLKTDEGRQHLRDLVIQADVVVENFRPGTLDRWGLGYEALKALNS 118
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+I S++GFG GPY+D PGYD+IA +GGL+ +TG P K G + D+ G++A
Sbjct: 119 GIILASISGFGQDGPYRDLPGYDLIAQGMGGLMAVTGTFGHSPVKAGFSLADIGAGMWAA 178
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
++ AL ++ +TG+G +D +LL T ++ + NY G + G +H ++ P+Q
Sbjct: 179 LGILTALYNRERTGQGAWVDVSLLDTMIAWHTYLAQNYFATGRDPVPLGNAHPSICPYQT 238
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
FK + Y+ I G+DK ++D C+ ++ + A DPR+ T A
Sbjct: 239 FKAQDDYLNIAVGNDKLWRDFCEALDQRAWADDPRFTTNA 278
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 2/122 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+ ++ + A DPR+ T A RVE+RE+L IE + +W+ + P V
Sbjct: 259 FCEALDQRAWADDPRFTTNADRVEHREILVDMIEEVLATRPVTDWIERLKSRGVPCGPVY 318
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEV--RTPPPALGEHTDYV 118
S ++ D ++ + + H + G+I VG V + ++ TPPP LGEHT V
Sbjct: 319 RFSDIYRDPQVEARSMKVPLQHPRLGNIWQVGNPVKFRGSEGNWTEWTPPPELGEHTQEV 378
Query: 119 LK 120
L
Sbjct: 379 LS 380
>gi|23500799|ref|NP_700239.1| CAIB/BAIF family protein [Brucella suis 1330]
gi|376279022|ref|YP_005109055.1| CAIB/BAIF family protein [Brucella suis VBI22]
gi|384223582|ref|YP_005614747.1| CAIB/BAIF family protein [Brucella suis 1330]
gi|23464457|gb|AAN34244.1| CAIB/BAIF family protein [Brucella suis 1330]
gi|343385030|gb|AEM20521.1| CAIB/BAIF family protein [Brucella suis 1330]
gi|358260460|gb|AEU08193.1| CAIB/BAIF family protein [Brucella suis VBI22]
Length = 420
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 124/281 (44%), Positives = 185/281 (65%), Gaps = 3/281 (1%)
Query: 212 NPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELS 271
N +LPL+ +++LDL+R++AGP+ TM LAD+GAEV K+E GD+ R W P N S
Sbjct: 14 NAALPLAGIKVLDLSRVLAGPWATMSLADMGAEVWKIENIQGGDDTRAWSVP--NYKGAS 71
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
TYF C NR KKS+ +D K+ EG +II +LAKQ DV+VENF G ++RL + Y+ L +N
Sbjct: 72 TYFLCANRGKKSLALDLKSREGLEIIHELAKQADVVVENFRSGTVERLKIDYESLKALNP 131
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
++YCS++G+G GP RPGYD + + GL+ ITG DG P ++G+A D+ G+ A
Sbjct: 132 GIVYCSISGYGQTGPEAQRPGYDFVVQAESGLMPITGQIDGEPTRIGVAMTDIVAGMVAT 191
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
+V+AAL + TG GQ ID +L ++ LINVG+ +LN G R+G +H VVP+Q+
Sbjct: 192 QSVLAALYQRKTTGLGQYIDVSLYECALNTLINVGSAHLNGGHVPARFGNAHPTVVPYQI 251
Query: 452 FKTSNGYVTIGTGSDKQYQDMC-KVMNLQHLALDPRYLTGA 491
F+ S+G + G+D+Q+ +C ++++L LA D R+ T +
Sbjct: 252 FECSDGAFALAVGNDRQFAILCERIIDLPELAADERFKTAS 292
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%)
Query: 3 KVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSI 62
++++L LA D R+ T + R NR L + + T + W+ + P QV ++
Sbjct: 275 RIIDLPELAADERFKTASGRALNRAALIPPMAERFRTNTRQHWMSACLKMGVPAGQVKTV 334
Query: 63 SQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDL 122
+ F +++ ++V+++ G I +V PA + PP LGE + VL D+
Sbjct: 335 PEAFESPNVKARQVVQKLESAHLGPISLVRPAQGLKAQENAAYKAPPMLGEDSASVLGDV 394
Query: 123 LNYDETTIAKL 133
L D +A L
Sbjct: 395 LGLDGNKLADL 405
>gi|194291314|ref|YP_002007221.1| formyl CoA transferase, l-carnitine dehydratase/bile acid-inducible
protein f CoA-transferase family [Cupriavidus
taiwanensis LMG 19424]
gi|193225218|emb|CAQ71160.1| putative formyl CoA transferase, L-carnitine dehydratase/bile
acid-inducible protein F CoA-transferase family
[Cupriavidus taiwanensis LMG 19424]
Length = 414
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 130/287 (45%), Positives = 184/287 (64%), Gaps = 17/287 (5%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL-----S 271
L+ VR+LDL+RI+AGP+C LADLGAEVIKVE+P GD+ R WGPP+L + +
Sbjct: 12 LAGVRVLDLSRILAGPWCAQNLADLGAEVIKVERPGAGDDTRSWGPPWLPGADGQPSRDA 71
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
TYF NR K+SV +D +P+GQ+I+++LA + +++EN+ G L R L Y L +N
Sbjct: 72 TYFAGANRGKQSVTLDIASPQGQEIVRELAAKSQIVLENYKVGDLKRYGLDYDSLKAVNP 131
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCS+TG+G GP +PGYD I +GGL+ +TG P G P KVG+A +D+ TG
Sbjct: 132 ALVYCSITGYGQTGPSAHKPGYDFIFQGLGGLMSVTGERDDLPGGGPQKVGVAVVDMLTG 191
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNA----GIEGKRWGTSH 443
+YA AV+AAL H +TG+GQ ID LL ++ VGA + A G R+G +H
Sbjct: 192 MYATVAVLAALRHAERTGEGQHIDMALLDA----VVAVGATPIIAQRVTGQAMPRYGNAH 247
Query: 444 ANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTG 490
AN+VP+ VF T++GY+ + G+D Q+Q C+ + LA D R+ TG
Sbjct: 248 ANMVPYHVFATADGYMIVAAGNDGQWQAYCRGVERPDLAADARFATG 294
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 65/138 (47%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C+ + LA D R+ TG R+ +R+ L +EA + T W+ + P +N
Sbjct: 277 CRGVERPDLAADARFATGPGRIIHRDTLVPLLEAHMRTRPTAHWVQALEAQGIPCGPIND 336
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
QV D ++ +L ++ + V + S T + PPP LG+HT+ VL+
Sbjct: 337 YGQVLEDPQVRHRELQVDLVRDDGSLCPTVKSPLRLSATPVQYDAPPPRLGQHTEQVLET 396
Query: 122 LLNYDETTIAKLKEKKIL 139
+L IA+L+E+ ++
Sbjct: 397 VLGLSAERIAQLREQGVV 414
>gi|374369118|ref|ZP_09627155.1| L-carnitine dehydratase/bile acid-inducible protein F [Cupriavidus
basilensis OR16]
gi|373099268|gb|EHP40352.1| L-carnitine dehydratase/bile acid-inducible protein F [Cupriavidus
basilensis OR16]
Length = 559
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 131/284 (46%), Positives = 178/284 (62%), Gaps = 15/284 (5%)
Query: 225 LTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL-----STYFTCVNR 279
LTR++AGP+CT LADLGAEVIKVE+P GDE R WGPP++ + STY+ NR
Sbjct: 161 LTRVLAGPWCTQNLADLGAEVIKVERPDAGDETRGWGPPWMPDEAGQARRDSTYYASTNR 220
Query: 280 NKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVT 339
K+S+ VDF EGQ+II+ +A CDVLVEN+ G L R LGY+ L E N L+YCSVT
Sbjct: 221 GKQSITVDFNGGEGQEIIRRMAATCDVLVENYKVGTLARYGLGYEDLREANPGLVYCSVT 280
Query: 340 GFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP--------PCKVGIASIDLATGLYAH 391
G+G GPY+ RPGYD + + GL+ +TG PD P P K G+A D+ATGLYA
Sbjct: 281 GYGQTGPYRHRPGYDFVFQGMSGLMSLTGAPDDPLNEGAGGGPQKFGVAVADMATGLYAS 340
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A+ AAL + ++G GQ ID LL +++ N YL +G +R+G +H N VP+QV
Sbjct: 341 LAITAALAWRERSGLGQHIDMALLDCALALGSNQAVGYLASGKVPRRYGNAHPNAVPYQV 400
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY--LTGALI 493
F + +G + + G+D Q+ CK + LA D R+ ++G L+
Sbjct: 401 FASLDGKLIVAVGNDGQFAAYCKAIGRPELAADARFAKVSGRLV 444
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 61/138 (44%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
CK + LA D R+ + R+ NR+ L ++ TTE WL + P +N
Sbjct: 422 CKAIGRPELAADARFAKVSGRLVNRDALLPQLADIMRTDTTEAWLARLEAAGVPCGPIND 481
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
+Q FAD ++ + E+ G + + +S T PP LGEHTD VL +
Sbjct: 482 FAQAFADPQVRHRGIQVELPLSSGGTCPAIASPMRFSATPLTHHRGPPVLGEHTDAVLGE 541
Query: 122 LLNYDETTIAKLKEKKIL 139
L +A+L+ ++
Sbjct: 542 SLGMAPEELARLRAAGVI 559
>gi|261750760|ref|ZP_05994469.1| CAIB/BAIF family protein [Brucella suis bv. 5 str. 513]
gi|261740513|gb|EEY28439.1| CAIB/BAIF family protein [Brucella suis bv. 5 str. 513]
Length = 329
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 124/281 (44%), Positives = 185/281 (65%), Gaps = 3/281 (1%)
Query: 212 NPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELS 271
N +LPL+ +++LDL+R++AGP+ TM LAD+GAEV K+E GD+ R W P N S
Sbjct: 48 NAALPLAGIKVLDLSRVLAGPWATMSLADMGAEVWKIENIQGGDDTRAWSVP--NYKGAS 105
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
TYF C NR KKS+ +D K+ EG +II +LAKQ DV+VENF G ++RL + Y+ L +N
Sbjct: 106 TYFLCANRGKKSLALDLKSREGLEIIHELAKQADVVVENFRSGTVERLKIDYESLKALNP 165
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
++YCS++G+G GP RPGYD + + GL+ ITG DG P ++G+A D+ G+ A
Sbjct: 166 GIVYCSISGYGQTGPEAQRPGYDFVVQAESGLMSITGQIDGEPTRIGVAMTDIVAGMVAT 225
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
+V+AAL + TG GQ ID +L ++ LINVG+ +LN G R+G +H VVP+Q+
Sbjct: 226 QSVLAALYQRKTTGLGQYIDVSLYECALNTLINVGSAHLNGGHVPARFGNAHPTVVPYQI 285
Query: 452 FKTSNGYVTIGTGSDKQYQDMC-KVMNLQHLALDPRYLTGA 491
F+ S+G + G+D+Q+ +C ++++L LA D R+ T +
Sbjct: 286 FECSDGAFALAVGNDRQFAILCERIIDLPELAADERFKTAS 326
>gi|66826035|ref|XP_646372.1| CoA-transferase family III protein [Dictyostelium discoideum AX4]
gi|74858519|sp|Q55CV9.1|Y9880_DICDI RecName: Full=CaiB/baiF CoA-transferase family protein DDB_G0269880
gi|60474353|gb|EAL72290.1| CoA-transferase family III protein [Dictyostelium discoideum AX4]
Length = 471
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 131/296 (44%), Positives = 190/296 (64%), Gaps = 7/296 (2%)
Query: 199 ENFYSLDLALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECR 258
+NF+S + N + PL+ +ILDL+R++AGP+ T + DLGA+VIKVE GD+ R
Sbjct: 13 QNFFSFK-NYCTINNNKPLNGFKILDLSRVLAGPYATQIFGDLGAQVIKVENVGKGDDTR 71
Query: 259 KWGPPFLNNTEL---STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGK 315
++GPPF + + S YF+C NRNKKS+ +D T EGQ I+ LAK+ DV +ENF G
Sbjct: 72 QYGPPFYVDEQGRKGSAYFSCANRNKKSIALDISTKEGQDIVYSLAKESDVFIENFKVGG 131
Query: 316 LDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPC 375
L + +L Y+ + +IN +IYCS+TGFG G Y PGYD ++GGL+ ITG + P
Sbjct: 132 LKKYSLDYETIKQINPSIIYCSITGFGQDGEYSKLPGYDFSVQAMGGLISITGDKEN-PY 190
Query: 376 KVGIASIDLATGLYAHGAVMAALLHKYKT--GKGQKIDCNLLSTQVSMLINVGANYLNAG 433
K G+A +D+ TGLYA+ A+ AAL H+ K+ KGQ ID +LL Q S L N G++YL G
Sbjct: 191 KCGVAIVDMMTGLYANIAIQAALHHREKSKDKKGQYIDVSLLDVQASFLANHGSSYLVTG 250
Query: 434 IEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+R G SH ++ P+ KT +G++ + G++ Q+Q MC V+ L HL+ +P + T
Sbjct: 251 ETSERVGNSHPSISPYDSLKTKDGFMVVAIGNNTQFQSMCNVLGLPHLSTNPLFST 306
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 77/183 (42%), Gaps = 45/183 (24%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
MC V+ L HL+ +P + T RV NR+ L + +T++ T++ + + + P + +N
Sbjct: 289 MCNVLGLPHLSTNPLFSTNPSRVLNRKQLLSILTNETLKFNTDDIVKLLGDSNVPCSPIN 348
Query: 61 SISQVFADEHIQDIKLV----------------------------------KEISHEK-- 84
SI +V + I+ ++ K I ++K
Sbjct: 349 SIDKVVNHKQIKHRNMIWNLPLNENNNNNLNNNNLNNNNSNNNLNNNNNNNKNIQNDKGE 408
Query: 85 --YGDIKIVGPAVAYSLTQPEVRT------PPPALGEHTDYVLKDLLNYDETTIAKLKEK 136
I ++G + +S T + PPP LG+HTD +LK+ + +E I LK
Sbjct: 409 YIMNSINLIGNPIHFSETNIHTPSSIKSNIPPPFLGQHTDEILKN-IGLNENQILNLKNN 467
Query: 137 KIL 139
I+
Sbjct: 468 NIV 470
>gi|419713458|ref|ZP_14240884.1| putative L-carnitine dehydratase [Mycobacterium abscessus M94]
gi|382946562|gb|EIC70846.1| putative L-carnitine dehydratase [Mycobacterium abscessus M94]
Length = 371
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 116/285 (40%), Positives = 192/285 (67%), Gaps = 2/285 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L + ++D +R++AGP+ TM+L D GAEVIK+E+PV GD+ R+WGPP+ ++ + +TYF
Sbjct: 6 LDGLLVVDFSRVLAGPYATMMLGDFGAEVIKIERPVLGDDTRQWGPPYDSDGQ-ATYFNS 64
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
VNRNK+SV +D +P+GQ ++LA + DV+VENF G +++ LGY+ L ++N LIYC
Sbjct: 65 VNRNKQSVVLDLTSPDGQHRARELAGRADVVVENFRAGTMEKFGLGYQSLKQLNPGLIYC 124
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
++TGFG +G D PGYD++ ++GGL+ +TG P KVG+A +D+ T L+A ++A
Sbjct: 125 AITGFG-RGAGADLPGYDLLVQAVGGLMSVTGPDAAHPSKVGVALVDVLTALHALSGILA 183
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
AL ++ +TG+GQ++D +L+S +S L+N + YL A + + G H ++ P+Q F+T++
Sbjct: 184 ALSYRDRTGQGQRVDTDLMSVLLSSLVNQASGYLGASVVPEALGNRHPSIAPYQTFETAD 243
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
+ I G+DKQ++ + + + + LA D R+ T L + L+
Sbjct: 244 RPIAIAVGNDKQFRLLAQALEMPRLARDDRFATNPLRVRHRGELV 288
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 3/113 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+ + + + LA D R+ T LRV +R L + +E + EK ++W V P +N
Sbjct: 259 LAQALEMPRLARDDRFATNPLRVRHRGELVRVLEQRLREKNADDWYDTLTAVGVPAGPIN 318
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGE 113
I++ F + I L ++ + ++ P V+ S T R PP LG+
Sbjct: 319 DIAEAF--RFAERIGLDVAVTVPGSPEPQVANP-VSMSKTPVVYRNGPPRLGQ 368
>gi|422606995|ref|ZP_16679000.1| L-carnitine dehydratase/bile acid-inducible protein F, partial
[Pseudomonas syringae pv. mori str. 301020]
gi|330890642|gb|EGH23303.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
syringae pv. mori str. 301020]
Length = 260
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 122/257 (47%), Positives = 174/257 (67%), Gaps = 9/257 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN-----NTELS 271
LS++R+LDL+R++AGP+ +LADLGA+VIKVE+P GD+ R WGPPFL NT +
Sbjct: 4 LSHIRVLDLSRVLAGPWAGQILADLGADVIKVERPGCGDDTRSWGPPFLQDAAGQNTTEA 63
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+S+ +DF PEGQ+++++LA + D+++ENF G L L Y+ L +N
Sbjct: 64 AYYLSANRNKQSITIDFTRPEGQRLVRELAAKSDIVIENFKVGGLASYGLDYESLKAVNP 123
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+LIYCS+TGFG GPY RPGYD + ++GGL+ +TG PDG P KVG+A D+ TG
Sbjct: 124 RLIYCSITGFGQSGPYATRPGYDFMIQALGGLMSLTGLPDGEEGGGPAKVGVALTDILTG 183
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A++AAL H+ ++ GQ ID LL QV+ L N NYL G+ +R G +H N+V
Sbjct: 184 LYSTTAILAALAHRDQSDTGQYIDMALLDVQVACLANQAMNYLTTGVAPRRLGNAHPNIV 243
Query: 448 PHQVFKTSNGYVTIGTG 464
P+Q F T++G + + G
Sbjct: 244 PYQAFPTADGDLILTVG 260
>gi|384263161|ref|YP_005418349.1| L-carnitine dehydratase/bile acid-inducible protein F
[Rhodospirillum photometricum DSM 122]
gi|378404263|emb|CCG09379.1| L-carnitine dehydratase/bile acid-inducible protein F
[Rhodospirillum photometricum DSM 122]
Length = 441
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 129/289 (44%), Positives = 180/289 (62%), Gaps = 9/289 (3%)
Query: 208 LSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-- 265
+SS LPL +RILDL+R++AGP+ T LADLGAEVIK+E+P GD+ R WGPPFL
Sbjct: 28 MSSAPAPLPLQGIRILDLSRVLAGPWATQALADLGAEVIKIERPGGGDDTRTWGPPFLKD 87
Query: 266 ---NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLG 322
++T + YF NR KKSV +D PEGQ +I+ LAK+ ++ENF G L R L
Sbjct: 88 DHGHDTAEAAYFLAANRGKKSVAIDLAHPEGQALIRALAKRSHAVIENFKVGGLARYGLD 147
Query: 323 YKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD----GPPCKVG 378
L +N L+YCS+TGFG GP + GYD + + GL+ +TG PD G P K+G
Sbjct: 148 RDSLHAVNPALVYCSITGFGQTGPAATQAGYDAMIQARSGLMSLTGLPDDQPGGGPMKIG 207
Query: 379 IASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKR 438
+A +D+ TGLYA ++AA+ +TG G+ +D LL T V+ L N N+L G+ R
Sbjct: 208 VALVDILTGLYAALGLVAAIREAEQTGVGRAVDLALLDTAVACLANQAMNHLVGGLIPGR 267
Query: 439 WGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
GT+H N+VP+Q T +G++ + G+D Q++ C V +L LA DPR+
Sbjct: 268 LGTAHPNIVPYQAMATQDGHLMLAVGNDGQFERFCAVADLPALAHDPRF 316
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 68/143 (47%), Gaps = 5/143 (3%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C V +L LA DPR+ RV +R+ L +E + E+ T WL + V P +N
Sbjct: 301 FCAVADLPALAHDPRFARNRDRVAHRDALLALLEPRLKERPTAAWLAALEAVGVPCGPIN 360
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTP---PPALGEHTDY 117
++ QVFAD + L E+ H G + +V + S T E P PP LG+HT
Sbjct: 361 TLDQVFADPQVLARGLRLEVPHPLSGTVPLVRSPLRLSGT--ETAAPAEAPPLLGQHTRG 418
Query: 118 VLKDLLNYDETTIAKLKEKKILG 140
VL DLL + L + ++G
Sbjct: 419 VLGDLLGLTAARLDALTAQGVIG 441
>gi|116694639|ref|YP_728850.1| acyl-CoA transferase/carnitine dehydratase [Ralstonia eutropha H16]
gi|113529138|emb|CAJ95485.1| predicted acyl-CoA transferase/carnitine dehydratase [Ralstonia
eutropha H16]
Length = 414
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 131/287 (45%), Positives = 186/287 (64%), Gaps = 17/287 (5%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL-----S 271
L+ VR+LDL+RI+AGP+C LADLGAEVIKVE+P GD+ R WGPP+L + +
Sbjct: 12 LAGVRVLDLSRILAGPWCAQNLADLGAEVIKVERPGAGDDTRSWGPPWLPGADGQPSRDA 71
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
TYF NR K+SV +D +P+GQ+I+++LA + +++EN+ G L R L Y L IN
Sbjct: 72 TYFAGANRGKQSVTLDIASPQGQEIVRELAAKSQIVLENYKVGDLKRYGLDYDSLKAINP 131
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
++YCS+TG+G GP +PGYD I +GGL+ +TG P G P KVG+A +D+ TG
Sbjct: 132 SIVYCSITGYGQTGPSAHKPGYDFIFQGLGGLMSVTGERDDLPGGGPQKVGVAVVDMLTG 191
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAG-IEGK---RWGTSH 443
+YA AV+AAL H +TG+GQ ID LL ++ VGA + A + GK R+G +H
Sbjct: 192 MYATVAVLAALRHAERTGEGQHIDMALLDA----VVAVGATPIIAQRVTGKAMPRYGNAH 247
Query: 444 ANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTG 490
AN+VP+ VF T++GY+ + G+D Q+Q C+ + LA D R+ TG
Sbjct: 248 ANMVPYHVFATADGYMIVAAGNDGQWQAYCRGVERPDLAADERFATG 294
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 65/138 (47%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C+ + LA D R+ TG R+ +R+ L +EA + T W+ + P +N
Sbjct: 277 CRGVERPDLAADERFATGPGRIIHRDTLVPLLEAHMRTRPTAHWVQALEAQGIPCGPIND 336
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
QV D ++ +L ++ + V + S T + PPP LGEHT+ VL+
Sbjct: 337 YGQVLEDPQVRHRELQVDLVRDDGSLCPTVKSPLRLSATPVQYDAPPPRLGEHTEQVLES 396
Query: 122 LLNYDETTIAKLKEKKIL 139
+L IA+L+E+ ++
Sbjct: 397 VLGMSAERIARLREQGVV 414
>gi|239813848|ref|YP_002942758.1| L-carnitine dehydratase/bile acid-inducible protein F [Variovorax
paradoxus S110]
gi|239800425|gb|ACS17492.1| L-carnitine dehydratase/bile acid-inducible protein F [Variovorax
paradoxus S110]
Length = 402
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 131/282 (46%), Positives = 185/282 (65%), Gaps = 3/282 (1%)
Query: 212 NPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELS 271
N SLPL+ VR+LDL+RI+AGP+C M+LAD+GAEVIKVE P GD+ R WG + TE +
Sbjct: 5 NSSLPLAGVRVLDLSRILAGPWCGMVLADMGAEVIKVEHPGRGDDTRDWGL-RVGKTE-T 62
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF VNRNK+SV +D +TPEGQQI +DLAKQCDV+++NF G +D+L LGY+ LS+ +
Sbjct: 63 AYFNSVNRNKRSVTLDLQTPEGQQIARDLAKQCDVVIQNFKFGGIDKLGLGYEQLSKEHP 122
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
LIYCS++G+ GP RPGYD++ GL+ + G PP K G+A +DL TG+Y+
Sbjct: 123 GLIYCSISGYDRTGPEAARPGYDLVVQGEAGLMALNGEASQPPLKFGVAMVDLFTGMYSA 182
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
AV+AAL + KTGKG+ ++ L + + G L G + R+G SH ++VP+ V
Sbjct: 183 QAVLAALYQREKTGKGRHVEMALFDCGLMITAYYGLEALLMGEDPPRYGNSHPSIVPYGV 242
Query: 452 FKTSNGYVTIGTGSDKQYQDMC-KVMNLQHLALDPRYLTGAL 492
F ++G + I G++ Q+ C +V+ LA D R+ T L
Sbjct: 243 FDAADGPLVITVGNNAQFARFCTEVIERPDLAADERFKTNIL 284
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 61/137 (44%)
Query: 3 KVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSI 62
+V+ LA D R+ T LR NR +L E+ A+ + + L P +V +
Sbjct: 266 EVIERPDLAADERFKTNILRSANRAVLLPELHAELARRQRADLLARLSASGIPCGEVLGL 325
Query: 63 SQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDL 122
+ D LV E H G + ++ P + + VR+ PP LGE T VL+ L
Sbjct: 326 LEALNSRRAADAGLVTEQPHPVAGKVNVLAPPYRFDGERLPVRSAPPQLGEGTHEVLQSL 385
Query: 123 LNYDETTIAKLKEKKIL 139
L + +A+LK ++
Sbjct: 386 LGLSDDRLAQLKTSGVV 402
>gi|295699695|ref|YP_003607588.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
sp. CCGE1002]
gi|295438908|gb|ADG18077.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
sp. CCGE1002]
Length = 403
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 126/281 (44%), Positives = 186/281 (66%), Gaps = 5/281 (1%)
Query: 212 NP--SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE 269
NP SLPL+ VR+LDL+R++AGP+C M+L DLGAEVIKVE P+ GD+ R WG T
Sbjct: 3 NPISSLPLAGVRVLDLSRVLAGPWCAMVLGDLGAEVIKVEHPLRGDDTRDWG--MRVGTT 60
Query: 270 LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEI 329
+TYF VNRNK+SVC+D ++ EGQ+I ++LA+QCDV+++NF G ++L LGY L+E
Sbjct: 61 ETTYFNSVNRNKRSVCLDLQSAEGQRIARELAQQCDVVIQNFKYGGAEKLGLGYAQLAED 120
Query: 330 NSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLY 389
LIYCS++G+ +GP RPGYDI+ GL+ + G+ D PP K G+A++DL TG+Y
Sbjct: 121 RDDLIYCSISGYDRQGPEAARPGYDIVVQGEAGLMAMNGNADQPPLKFGVAAVDLFTGMY 180
Query: 390 AHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPH 449
+ AV+AAL + +TGKG+ I+ L + + G + L + R+G +H ++VP+
Sbjct: 181 SAQAVLAALFERQRTGKGRHIEMALFDCGLMITSYCGLDSLMLKDDPPRYGNAHPSIVPY 240
Query: 450 QVFKTSNGYVTIGTGSDKQYQDMCK-VMNLQHLALDPRYLT 489
VF ++G + I G+++QY+ C+ V+ L D RY T
Sbjct: 241 GVFDAADGPLVIAVGNNRQYERFCREVIERPDLIDDERYRT 281
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 57/136 (41%)
Query: 3 KVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSI 62
+V+ L D RY T +R NRE L E+ E L P +V +
Sbjct: 266 EVIERPDLIDDERYRTNIVRAVNRETLVPELTRAIGLHRREVLLERLARAGIPCGEVLGL 325
Query: 63 SQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDL 122
+ + D LV H + G ++ P + + VR+ PP LGE T VL+ L
Sbjct: 326 HEALTSKRAADAGLVTTCPHPEAGSTHVLAPPYRFDGARLPVRSGPPQLGEATHDVLQSL 385
Query: 123 LNYDETTIAKLKEKKI 138
L I++LK +++
Sbjct: 386 LGLSAGQISQLKAEEV 401
>gi|378763701|ref|YP_005192317.1| acyl-CoA transferase/carnitine dehydratase-like conserved
hypothetical protein [Sinorhizobium fredii HH103]
gi|365183329|emb|CCF00178.1| acyl-CoA transferase/carnitine dehydratase-like conserved
hypothetical protein [Sinorhizobium fredii HH103]
Length = 392
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 130/279 (46%), Positives = 175/279 (62%), Gaps = 4/279 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL---ST 272
PL +R+L+L RI+AGP+ LADLGAEVIKVE P GD+ R WGPPF+ +
Sbjct: 4 PLKGIRVLELARILAGPWIGQTLADLGAEVIKVESP-AGDDTRTWGPPFVEGEGGKLDAA 62
Query: 273 YFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQ 332
YF NR K+SV +DF T EGQ+ ++ LA Q DVL+ENF G L + L Y+ L + N +
Sbjct: 63 YFHACNRGKRSVVLDFTTEEGQEAVRLLAAQSDVLLENFKVGGLAKYGLDYESLRKGNPR 122
Query: 333 LIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHG 392
LIYCSVTGFG GPY R GYD I + G++ +TG PD P K+G+A D+ TGLY
Sbjct: 123 LIYCSVTGFGQDGPYAHRAGYDYIVQGMSGIMDLTGEPDREPQKIGVAFADIFTGLYGVI 182
Query: 393 AVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVF 452
AV AAL + +TG+GQ+ID L +L N N+L +G +R G +H N+ P+QVF
Sbjct: 183 AVQAALAQRERTGEGQQIDMALFDCMTGVLANQALNFLVSGKAPRRLGNAHPNIAPYQVF 242
Query: 453 KTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
TS+G++ + G+D+Q+ C ++ LA D RY T A
Sbjct: 243 PTSDGHLIVAVGNDRQFVKFCDLLGRPDLANDARYRTNA 281
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 2/124 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C ++ LA D RY T A RV++R+ L E+ A+T + + L + V P +N
Sbjct: 262 FCDLLGRPDLANDARYRTNAGRVQHRDTLTPELAAETAKFERDALLAKLEAVGVPGGPIN 321
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVG--PAVAYSLTQPEVRTPPPALGEHTDYV 118
+++ VFAD I ++ E H K G + +S + P LGEHT+ V
Sbjct: 322 TVADVFADPQIVHRQMRVEAPHTGAAAGKTPGVRTPIRFSGAALALERGVPRLGEHTEEV 381
Query: 119 LKDL 122
L ++
Sbjct: 382 LAEI 385
>gi|406974366|gb|EKD97486.1| hypothetical protein ACD_23C00899G0002 [uncultured bacterium]
Length = 406
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 127/283 (44%), Positives = 179/283 (63%), Gaps = 9/283 (3%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL----- 270
PLSN+R+LD++RI+AGP+ T LADLGA+VIKVE+P GD+ R+ GPPFL +
Sbjct: 4 PLSNIRVLDMSRILAGPWATQNLADLGADVIKVEKPGVGDDTRQMGPPFLQDEATGEYGD 63
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
+ YF C NR KKS+ VDF GQ +IK+L Q DV VEN+ G L++ L Y+ L IN
Sbjct: 64 AAYFLCCNRGKKSITVDFADARGQALIKELVLQTDVFVENYKVGALEKYGLDYQSLKAIN 123
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLAT 386
++IYCS+TGFG GPYK+R GYD + +GGL+ +TG P G P +VG+A DL
Sbjct: 124 PEMIYCSITGFGQTGPYKNRAGYDYLIQGMGGLMSVTGERDDLPGGGPQRVGVAVSDLMA 183
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANV 446
G+YA A++AAL H+ GQ ID +LL QV L+N N+ +G KR G+ H N+
Sbjct: 184 GMYAAVAILAALHHRTAGHGGQHIDISLLDCQVGSLVNQALNHFVSGDVPKRMGSGHPNI 243
Query: 447 VPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P+ V+ S+G++ + G+D Q++ +C + + D R+ T
Sbjct: 244 APYAVYPASDGHLILAVGNDTQFRRLCSAIGHPEMGGDERFAT 286
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + + D R+ T RV+NR L + + T ++ EW+ + + P +N
Sbjct: 269 LCSAIGHPEMGGDERFATIRARVQNRTQLDEWLFPITRSRSVAEWVSLLEEAQVPGGPIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I +VF D H+ + ++ H KYG + V + +S T E PP LGEHTD VL+
Sbjct: 329 DIERVFQDPHVIARGMRMDLPHAKYGSVPSVRNPIRFSETPLEFEVAPPLLGEHTDEVLR 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
+N IA L+ IL
Sbjct: 389 S-INLSPEEIAGLRSAGIL 406
>gi|261202956|ref|XP_002628692.1| dermal papilla derived protein 13 [Ajellomyces dermatitidis
SLH14081]
gi|239590789|gb|EEQ73370.1| dermal papilla derived protein 13 [Ajellomyces dermatitidis
SLH14081]
Length = 431
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 129/273 (47%), Positives = 179/273 (65%), Gaps = 20/273 (7%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L +ILDLTR++A T E KW +S YF C
Sbjct: 57 LHGFKILDLTRVLAD---------------DTRYWRTEGEGEKW-----QTDAISCYFAC 96
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
VNRNK+SV ++ K+ +G++I+ DL K DV+VENFVPGK+D L +GY LS+IN +I+
Sbjct: 97 VNRNKRSVALNLKSQKGREILLDLVKVSDVVVENFVPGKMDELGIGYDVLSKINPAVIHA 156
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S++G+G+ GPY R GYDIIAA+ GGLLHITG DGPP K GI DL TGLY HGA+MA
Sbjct: 157 SISGYGAAGPYAQRAGYDIIAAAEGGLLHITGEADGPPTKPGIGLTDLCTGLYMHGAIMA 216
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
AL +++TGKGQK+D +L TQ+S+LINV +++LN G E +RWGT+H ++VP++ FKT +
Sbjct: 217 ALQARHRTGKGQKLDGSLFETQLSLLINVASSWLNMGQEAQRWGTAHPSIVPYEGFKTKD 276
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
Y+ +G +++Q+ + + M LA D R+LT
Sbjct: 277 SYLVLGATNNRQFGVLAERMGRPDLATDERFLT 309
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 76/141 (53%), Gaps = 3/141 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+ + M LA D R+LT RV NR L + KTT+EWL +++ PY +N
Sbjct: 292 LAERMGRPDLATDERFLTNDSRVRNRSELNNILYDLFKTKTTDEWLDVYENSGIPYGPIN 351
Query: 61 SISQVFADEHIQDIKLVKEISHEKY--GDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
S+ +VF ++VK I + G K+VG V +S T+ VR+ PP LGEHTD V
Sbjct: 352 SLERVFTHTQTHAREMVKSIDFDAAVDGIFKVVGFPVKFSNTEASVRSNPPLLGEHTDDV 411
Query: 119 LKDLLNYDETTIAKLKEKKIL 139
LK+ L + +A L+ +K++
Sbjct: 412 LKE-LGLSQEKLADLRREKVI 431
>gi|319791564|ref|YP_004153204.1| L-carnitine dehydratase/bile acid-inducible protein f [Variovorax
paradoxus EPS]
gi|315594027|gb|ADU35093.1| L-carnitine dehydratase/bile acid-inducible protein F [Variovorax
paradoxus EPS]
Length = 402
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 129/282 (45%), Positives = 186/282 (65%), Gaps = 3/282 (1%)
Query: 212 NPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELS 271
N SLPL+ VR+LDL+RI+AGP+C M+LAD+GAEVIKVE P GD+ R WG + TE +
Sbjct: 5 NSSLPLAGVRVLDLSRILAGPWCGMVLADMGAEVIKVEHPGRGDDTRDWGL-RVGKTE-T 62
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF VNRNK+SV +D +TPEGQQ+ +DLAKQCDV+++NF G +D+L LGY+ LS+
Sbjct: 63 AYFNSVNRNKRSVTLDLQTPEGQQLARDLAKQCDVVIQNFKFGGIDKLGLGYEQLSKEQP 122
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
LIYCS++G+ GP RPGYD++ GL+ + G + PP K G+A++DL TG+Y+
Sbjct: 123 GLIYCSISGYDRTGPEAARPGYDLVVQGEAGLMALNGEANQPPLKFGVAAVDLFTGMYSA 182
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A++AAL + KTGKG+ ++ L + + G L G + R+G SH ++VP+ V
Sbjct: 183 QAILAALYQREKTGKGRHVEMALFDCGLMITAYYGLEALLMGEDPPRYGNSHPSIVPYGV 242
Query: 452 FKTSNGYVTIGTGSDKQYQDMC-KVMNLQHLALDPRYLTGAL 492
F ++G + I G++ Q+ C V++ LA D R+ T L
Sbjct: 243 FDAADGPLVITVGNNAQFARFCTDVIDRPDLAADERFKTNIL 284
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 61/136 (44%)
Query: 4 VMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSIS 63
V++ LA D R+ T LR NR +L E+ A+ ++ + L P +V +
Sbjct: 267 VIDRPDLAADERFKTNILRSANRAVLLPELHAELAKRQRVDLLAKLTASGIPCGEVLGLL 326
Query: 64 QVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLL 123
+ + D LV E H G + ++ P + + VR PP LGE T VL+ LL
Sbjct: 327 EALQSKRATDAGLVTEQPHPVAGTVNVLAPPYRFDGERLPVRNAPPTLGEGTHDVLQSLL 386
Query: 124 NYDETTIAKLKEKKIL 139
+ +A LK ++
Sbjct: 387 GLSDDKLAALKTSGVV 402
>gi|374367853|ref|ZP_09625912.1| acyl-CoA transferase/carnitine dehydratase [Cupriavidus basilensis
OR16]
gi|373100789|gb|EHP41851.1| acyl-CoA transferase/carnitine dehydratase [Cupriavidus basilensis
OR16]
Length = 407
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 136/305 (44%), Positives = 192/305 (62%), Gaps = 25/305 (8%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
L VR+LDL+RI+AGP+C LADLGAEVIKVE+P GD+ R WGPP+L + + +
Sbjct: 5 LDGVRVLDLSRILAGPWCAQNLADLGAEVIKVERPGVGDDTRSWGPPWLPDGDGKPSRDA 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
+Y+ NR K+SV +D + EGQ I+++LA + +++EN+ G L R L Y L IN
Sbjct: 65 SYYAGANRGKRSVTLDIASTEGQAIVRELAAKSQIVLENYKVGDLKRYGLDYDSLRAINP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCS+TG+G +GP +PGYD I IGGL+ ITG P G P KVG+A +D+ TG
Sbjct: 125 ALVYCSITGYGQEGPSAHKPGYDFIFQGIGGLMSITGERDDLPGGGPQKVGVAVVDMLTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGAN-YLNAGIEGK---RWGTSH 443
+YA AV+AAL H +TG+GQ+ID LL ++ VGA L I GK R+G +H
Sbjct: 185 MYATVAVLAALRHAERTGEGQRIDMALLDA----VVAVGATPILAQKITGKTPQRFGNAH 240
Query: 444 ANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTG--------ALILA 495
AN+VP+ VF T++GY+ + G+D Q+Q C+ + LA D R+ TG AL+
Sbjct: 241 ANMVPYHVFATADGYMIVAAGNDGQWQGYCRGVERPDLATDERFTTGTGRIVNRDALVPL 300
Query: 496 MTSHL 500
+ +H+
Sbjct: 301 LEAHM 305
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 63/138 (45%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C+ + LA D R+ TG R+ NR+ L +EA TT +W+ + P +N
Sbjct: 270 CRGVERPDLATDERFTTGTGRIVNRDALVPLLEAHMRTGTTAQWVQALEREGIPCGPIND 329
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
+QV D ++ +L ++ G V + S T PP LGEHT+ VL
Sbjct: 330 YAQVLEDPQVRYRELQVDMVRSDGGLCPTVKSPLRLSATPVRYDAAPPRLGEHTEAVLSG 389
Query: 122 LLNYDETTIAKLKEKKIL 139
+L IA L+E+ ++
Sbjct: 390 VLGMSAARIAALREQGLI 407
>gi|254503511|ref|ZP_05115662.1| CAIB/BAIF family [Labrenzia alexandrii DFL-11]
gi|222439582|gb|EEE46261.1| CAIB/BAIF family [Labrenzia alexandrii DFL-11]
Length = 423
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 129/283 (45%), Positives = 177/283 (62%), Gaps = 8/283 (2%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
LS + +LDL+RI+AGP CT +L DLGAEVIK+E+PV GD+ R WGPPFL N T S
Sbjct: 11 LSGLLVLDLSRILAGPTCTQILGDLGAEVIKIERPVRGDDTRGWGPPFLKNADGEETSES 70
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK SV +D + EGQ +I+ LA++ D+LVENF G L R L Y+ L IN
Sbjct: 71 AYYLSSNRNKDSVAIDLASEEGQDLIRKLAEKADILVENFKVGDLKRRGLDYETLKAINP 130
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD---GPPCKVGIASIDLATGL 388
+LIYCS++GFG GPY R GYD + +GG++ +TG D G K G+ D+ G+
Sbjct: 131 KLIYCSISGFGQTGPYSHRAGYDFLIQGMGGIMSLTGFDDEDGGTQTKCGVGIADVMCGM 190
Query: 389 YAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVP 448
YA +++AA+ H+++TG+GQ ID +LL QVS LIN G +L +G R G H +VP
Sbjct: 191 YATVSILAAVHHRHRTGEGQYIDISLLDAQVSWLINQGVAHLVSGEVPGRLGNGHPTIVP 250
Query: 449 HQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
++ F ++G + G+D Q+Q C V LA DP + A
Sbjct: 251 YETFPGADGPFILAVGNDSQFQKFCDVAGAPELATDPLFAKNA 293
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 66/141 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C V LA DP + A RV NR+ L +I T+E+ +W+ + P VN
Sbjct: 274 FCDVAGAPELATDPLFAKNADRVRNRKTLVPKIRRLTIERDAADWIRDLEAAGVPCGPVN 333
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ QVF D + ++ + H G + ++G + T + R PP LG T VL+
Sbjct: 334 DLGQVFTDHQVLAREMKITLPHPVSGAVDLIGSPIKMGKTPVDYRKAPPMLGADTQDVLQ 393
Query: 121 DLLNYDETTIAKLKEKKILGL 141
L ++ IAKL E+ IL L
Sbjct: 394 RHLELSDSEIAKLAERGILDL 414
>gi|424896072|ref|ZP_18319646.1| putative acyl-CoA transferase/carnitine dehydratase [Rhizobium
leguminosarum bv. trifolii WSM2297]
gi|393180299|gb|EJC80338.1| putative acyl-CoA transferase/carnitine dehydratase [Rhizobium
leguminosarum bv. trifolii WSM2297]
Length = 399
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 118/278 (42%), Positives = 177/278 (63%), Gaps = 4/278 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE----LS 271
PL+ +R+++L R++AGP+ +LADLGA+VIKVE P GD+ R+WGPPF+ + + +
Sbjct: 9 PLAGIRVIELARVLAGPWAGQMLADLGADVIKVENPDGGDDTRQWGPPFVEDADGENLSA 68
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NR K+SV D K+ EGQ +++ L DV++ENF G L + L Y L ++N
Sbjct: 69 AYYHAANRGKRSVTADLKSEEGQDLVRRLVATADVVIENFKLGGLVKYGLDYDSLRKLNP 128
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+L+YCS+TGFG GP GYD I + G + ITG PDG P K G+A D+ TG+YA
Sbjct: 129 KLVYCSITGFGQTGPSAGLAGYDYIVQGMSGFMSITGEPDGQPMKAGVAIADIFTGIYAV 188
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A+ AAL+H KTG+GQ +D LL Q ++L N NYL +G R G +H N+ P++V
Sbjct: 189 SAIEAALIHALKTGEGQLVDMALLDVQSAVLANQNMNYLVSGTAPTRLGNAHPNISPYEV 248
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
++GY+ + G+D Q++ +C ++ L+ +A D R+ T
Sbjct: 249 VPAADGYLILAVGNDGQFRRLCTILGLETVAGDERFAT 286
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 59/122 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ L+ +A D R+ T RV NR + + I +T++ + L + P +N
Sbjct: 269 LCTILGLETVAGDERFATNKARVANRGEVRRLISTETLKWQKADLLKACEENGVPAGPIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I ++FAD ++ L +++ I V V S T P P LGEHT+ +L
Sbjct: 329 TIEEMFADPQVEARGLRIDLADAAGTVIPGVRTPVVLSETPLRYSRPSPRLGEHTEEILA 388
Query: 121 DL 122
+L
Sbjct: 389 EL 390
>gi|378727050|gb|EHY53509.1| formyl-CoA transferase [Exophiala dermatitidis NIH/UT8656]
Length = 465
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 127/285 (44%), Positives = 182/285 (63%), Gaps = 16/285 (5%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL---------- 265
PL +R+LD+TR++AG +L DLGAEVIK+E P GD+ R WGPPF
Sbjct: 64 PLEGIRVLDMTRVLAG-----ILGDLGAEVIKIEHPTRGDDTRAWGPPFAKYKDGAVVKG 118
Query: 266 NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKH 325
S YF VNRNKKSV + F+ PEG +I+ +LAK DVLVEN++PG L + L Y+
Sbjct: 119 GRAGESAYFVGVNRNKKSVGLSFQHPEGIKILHELAKTSDVLVENYIPGALKKYQLDYES 178
Query: 326 LSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLA 385
L +IN +LIY S+TG+G GPY R GYD++ + GL+HITG +G P KVG+A DL
Sbjct: 179 LRKINPRLIYASITGYGQTGPYSKRAGYDVMVEAEFGLMHITGERNGSPVKVGVAVTDLT 238
Query: 386 TGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGK-RWGTSHA 444
TGLY A+MA+LL + +T +GQ +D L Q + L N+ ++ L +G + RWGT+H
Sbjct: 239 TGLYTVNAIMASLLARQRTNQGQHLDVALSDCQTATLANIASSVLISGERDQGRWGTAHP 298
Query: 445 NVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
++VP++ F+T++G + IG G+D+ + +C + DPR++T
Sbjct: 299 SIVPYKGFQTADGDIMIGGGNDRLFGILCDKLGRPEWKTDPRFVT 343
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 81/139 (58%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + DPR++T +RVENR++L IE T KTT++WL +F+G PYA +N
Sbjct: 326 LCDKLGRPEWKTDPRFVTNDVRVENRDVLEPLIEEMTRTKTTQQWLDVFEGSGMPYAAIN 385
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ +H + +V EI H GDIK+V V YS + VR+PPP LGEHTD VL
Sbjct: 386 DVKDTLDHDHTKARGMVTEIQHPACGDIKLVSHPVKYSGSVTGVRSPPPTLGEHTDQVLT 445
Query: 121 DLLNYDETTIAKLKEKKIL 139
++L D + +LK K ++
Sbjct: 446 EVLGLDGKEVEELKGKGVV 464
>gi|388579028|gb|EIM19358.1| CoA-transferase family III [Wallemia sebi CBS 633.66]
Length = 395
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 122/265 (46%), Positives = 170/265 (64%), Gaps = 9/265 (3%)
Query: 236 MLLADLGAEVIKVEQPVTGDECRKWGPPFL---------NNTELSTYFTCVNRNKKSVCV 286
MLLAD+GA VIK+E+P GD+ R W PP + S YF NRNK+S+ +
Sbjct: 1 MLLADMGANVIKIEEPTRGDDTRSWLPPAAKLKPNPAAPHLPPESAYFLSTNRNKRSLAL 60
Query: 287 DFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGP 346
+ K GQ IIK L K DV VEN++PGKL LGY+ + IN +IY S+TG+G GP
Sbjct: 61 NLKHKSGQSIIKKLVKDADVFVENYLPGKLSEFGLGYEDIKSINPSIIYASITGYGQTGP 120
Query: 347 YKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGK 406
+ + PGYD++ + GL+HITG G P KVG+A D+ TGLYAHGA++AAL +K +TG+
Sbjct: 121 FANAPGYDVLIEAEAGLMHITGEKQGNPVKVGVAITDITTGLYAHGAILAALFNKLRTGE 180
Query: 407 GQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSD 466
G +D +L +Q++ L N+ +NYL +G E +R GTSH ++VP+Q F S+GY+ IG G+D
Sbjct: 181 GAHLDISLFESQIASLANIASNYLISGKEAERQGTSHPSIVPYQTFTASDGYIMIGAGND 240
Query: 467 KQYQDMCKVMNLQHLALDPRYLTGA 491
KQ+ + +V+ D RY T A
Sbjct: 241 KQFVSLAEVLGKDEWNSDERYKTNA 265
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 76/141 (53%), Gaps = 4/141 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+ +V+ D RY T A RV R+ L ++ +++ + WL F+G F + +N
Sbjct: 246 LAEVLGKDEWNSDERYKTNASRVNYRDELVGQLNCILSKQSIDYWLKKFKGSRFSFGPIN 305
Query: 61 SISQVFADEHIQDI--KLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
+I + F EH Q + +V EI H + G++K+ PA+ YS + ++ PPP LG+HT+ V
Sbjct: 306 NIQRTF--EHPQSLARNVVTEIEHPRIGNVKLTAPAIGYSGEKLKITKPPPYLGQHTNEV 363
Query: 119 LKDLLNYDETTIAKLKEKKIL 139
L++ D+ + KE ++
Sbjct: 364 LREEGYTDDELLQFRKEGVVI 384
>gi|327310742|ref|YP_004337639.1| glucose dehydrogenase [Thermoproteus uzoniensis 768-20]
gi|326947221|gb|AEA12327.1| glucose dehydrogenase (GDH) [Thermoproteus uzoniensis 768-20]
Length = 400
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 127/276 (46%), Positives = 186/276 (67%), Gaps = 3/276 (1%)
Query: 215 LPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYF 274
LPL VR++DLT +AGPF TMLLADLGAEVIKVE P GD+ R WGPPF + S YF
Sbjct: 4 LPLEGVRVVDLTSAMAGPFATMLLADLGAEVIKVEPP-EGDQSRDWGPPFYGE-KYSAYF 61
Query: 275 TCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLI 334
VNR KKSV V+ K+ +G++++ L ++ DV +E+F PG RL + Y+ L ++N +LI
Sbjct: 62 ASVNRGKKSVVVNLKSEDGRRVVYRLVERADVFLESFRPGTAARLGVDYQTLRKLNPRLI 121
Query: 335 YCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAV 394
YCS++GFG G Y+D+PGYD+IA ++ GL+ +TG PDGPP K + D+ TG+Y AV
Sbjct: 122 YCSISGFGQYGRYRDQPGYDLIALAMSGLMDLTGEPDGPPVKFAVPIADIVTGMYCAVAV 181
Query: 395 MAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKT 454
+AAL + +TG+G ID LL + + + + A+YL +G +R G++H+++ P+Q FK
Sbjct: 182 LAALRARERTGEGAYIDMALLDSALGISTHQSASYLASGRVPRRLGSAHSSIAPYQAFKA 241
Query: 455 SNG-YVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+G Y + G++K ++D CK + + L DPR+ T
Sbjct: 242 GDGRYFIVAVGTEKLWRDFCKAIGREDLVDDPRFET 277
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
CK + + L DPR+ T R NRE L E+E ++ W+ + + P A +
Sbjct: 260 FCKAIGREDLVDDPRFETNDKRAVNREALAAELEKVFSQRPASHWVEVLRSAGIPAAPIY 319
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I++ DE+ ++ ++ E + G +++VG + PPP LG+HT VL+
Sbjct: 320 NIAEALNDENTRERGMLLEYA-TALGAVRVVGSPIKIDGKPLAASAPPPLLGQHTVEVLR 378
Query: 121 DLLNYDETTIAKLKEKKILG 140
+ L Y + I +L ++ +G
Sbjct: 379 E-LGYSDEEIERLIKEGAVG 397
>gi|384440557|ref|YP_005655281.1| CAIB/BAIF protein [Thermus sp. CCB_US3_UF1]
gi|359291690|gb|AEV17207.1| CAIB/BAIF protein [Thermus sp. CCB_US3_UF1]
Length = 395
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 121/266 (45%), Positives = 170/266 (63%), Gaps = 3/266 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
PL+ +++LDL+R++AGP CTM+LADLGAEV+KVE P GDE R WGPPF+ S YF
Sbjct: 3 PLAGLKVLDLSRVLAGPLCTMILADLGAEVVKVEPP-WGDETRGWGPPFVAGE--SAYFL 59
Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
VNR KKS+ +D K EGQ+ ++ LA + DVLVENF G L R L Y L +N +L+Y
Sbjct: 60 SVNRGKKSLALDLKAKEGQEAVRRLAARADVLVENFKTGDLARFGLDYGSLKALNPRLVY 119
Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
S+TGFG GP PGYD G++ +TG P GPP KVG+A ID+ TG+ AV+
Sbjct: 120 LSLTGFGQTGPRAKEPGYDAALQGYTGIMSVTGEPHGPPMKVGVAWIDVMTGMMGAVAVL 179
Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
AAL + ++G GQ +D +L + L+N+G +YL G R G +HA +VP+ F +
Sbjct: 180 AALWERERSGLGQHVDLSLFDVGLFALVNLGESYLLTGRPPARLGNAHAQIVPYGAFPAA 239
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHL 481
+G++ + G+D+Q+ +C + L L
Sbjct: 240 DGWLVLAVGNDEQFARLCGALGLGEL 265
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 4/139 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + L L R+ T A RVE+RE + + + + WL FQG+ P A VN
Sbjct: 256 LCGALGLGELV--ERFPTNASRVEHREAVVEALSQVLRTRPRAYWLEKFQGIGVPAAPVN 313
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDI-KIVGPAVAYSLTQPEVRTPPPALGEHTDYVL 119
+ + F D Q + V + H G + + P S T PPP LGEHT+ VL
Sbjct: 314 DLKEAFQDPQAQAREAVWTLPHPLLGSLPTLANPLRFLSRTPASPSLPPPLLGEHTEEVL 373
Query: 120 KDLLNYDETTIAKLKEKKI 138
+ + + L EK +
Sbjct: 374 LE-AGFTPEEVRALVEKGV 391
>gi|254472065|ref|ZP_05085466.1| caib/baif family protein [Pseudovibrio sp. JE062]
gi|211959267|gb|EEA94466.1| caib/baif family protein [Pseudovibrio sp. JE062]
Length = 391
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 128/279 (45%), Positives = 176/279 (63%), Gaps = 4/279 (1%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL---NNTEL 270
+ PL N+R+L+L RI+AGP+ L+DLGA+VIKVE P GD+ R WGPPF+ T+
Sbjct: 2 TAPLENIRVLELARILAGPWIGQTLSDLGADVIKVESP-RGDDTRTWGPPFIEEEGGTKS 60
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
+ YF NR K+S+ DF E ++I DL +Q DVL+ENF G L + L Y L +IN
Sbjct: 61 AAYFHACNRGKRSITADFSKSEDLELIYDLVRQSDVLIENFKVGGLAKYGLDYVSLKKIN 120
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYA 390
+LIYCSVTGFG GPY R GYD + +GG++ +TG G P KVG+A D+ TGLY
Sbjct: 121 PKLIYCSVTGFGQDGPYAHRAGYDFMIQGMGGIMDLTGSKGGEPQKVGVAFADIFTGLYG 180
Query: 391 HGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQ 450
+ AAL + TG+G+ ID LL QV +L N NYL++G R G +H N+VP+Q
Sbjct: 181 VIGIQAALRRRDLTGEGEWIDMALLDAQVGVLANQAMNYLSSGNIPTRMGNAHPNIVPYQ 240
Query: 451 VFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
VF+ +G++ + G+D Q+ + CK++ LA D RY T
Sbjct: 241 VFEVKDGHLIVAVGNDSQFANFCKILGEPALAEDERYAT 279
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 64/124 (51%), Gaps = 2/124 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
CK++ LA D RY T RV++RE L ++++A + ++ L + P +N
Sbjct: 262 FCKILGEPALAEDERYATNPSRVKHREELTEKLQALVLTFNRDDLLSKMEERGVPAGPIN 321
Query: 61 SISQVFADEHIQ--DIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
+++ V D+ I+ +K+ S + G+ V + ++ ++ ++ PAL EH + +
Sbjct: 322 TVADVLQDQQIEHRQMKVNLPTSSKDQGEQTYVRTPIQFTNSKLKLEKGAPALDEHRNEI 381
Query: 119 LKDL 122
L++L
Sbjct: 382 LREL 385
>gi|421591326|ref|ZP_16036201.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhizobium
sp. Pop5]
gi|403703224|gb|EJZ19534.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhizobium
sp. Pop5]
Length = 400
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 116/278 (41%), Positives = 176/278 (63%), Gaps = 4/278 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE----LS 271
PL+ +R+++L R++AGP+ +LADLGA+VIKVE P GD+ R+WGPPF+ + +
Sbjct: 10 PLAGIRVIELARVLAGPWAGQMLADLGADVIKVENPDGGDDTRQWGPPFVEGADGENLSA 69
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NR K+S+ D K+ EGQ +++ L DV++ENF G L + L Y L ++N
Sbjct: 70 AYYHATNRGKRSITADLKSAEGQDLVRRLVATADVVIENFKLGGLAKYGLDYDSLRKVNP 129
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+L+YCS+TGFG GPY GYD I + G + ITG PDG P K G+A D+ TG+YA
Sbjct: 130 KLVYCSITGFGQTGPYAGLAGYDYIVQGMSGFMSITGEPDGQPMKAGVAIADIFTGIYAV 189
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A+ AAL+H K+G+GQ ID LL Q ++L N NYL +G R G +H N+ P++V
Sbjct: 190 SAIEAALIHALKSGEGQLIDMALLDVQSAVLANQNMNYLISGTAPTRLGNAHPNISPYEV 249
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
++GY+ + G+D Q++ + ++ L+ ++ D R+ T
Sbjct: 250 VPAADGYLILAVGNDGQFRRLSAILGLEAMSGDERFFT 287
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 60/126 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+ ++ L+ ++ D R+ T RV NR + + I A+T++ + L + + P +N
Sbjct: 270 LSAILGLEAMSGDERFFTNRARVANRGEVRRLISAETLKWQKADLLKACEDNAVPAGAIN 329
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I ++FAD +Q L +++ I V V S T P P LGEH +L
Sbjct: 330 TIEEMFADPQVQARGLRIDLADAAGTVIPGVRTPVVMSETPLRYTRPSPRLGEHGQEILA 389
Query: 121 DLLNYD 126
+L Y+
Sbjct: 390 ELAVYE 395
>gi|358400581|gb|EHK49907.1| hypothetical protein TRIATDRAFT_234225 [Trichoderma atroviride IMI
206040]
Length = 396
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 125/285 (43%), Positives = 183/285 (64%), Gaps = 9/285 (3%)
Query: 225 LTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL--------NNTELSTYFTC 276
++R++AGP+CT +L DLGAEVIK+E P GD+ R WGPP+ S YF
Sbjct: 1 MSRVLAGPYCTQILGDLGAEVIKIEHPTRGDDTRAWGPPYAKYKPDSGRQGPGESAYFLG 60
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
NRNKKS+ + F+ P+G I+ LA +CD+LVEN++PG L + ++ Y+ L +IN LIY
Sbjct: 61 ANRNKKSLGLSFQHPDGVDILHKLAAKCDILVENYLPGTLKKYSMDYESLRKINPGLIYA 120
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S+TG+G GPY +R GYD++ + GL+HITG DGPP KVG+A DL TGLY ++MA
Sbjct: 121 SITGYGQTGPYSNRAGYDVMVEAEFGLMHITGSRDGPPVKVGVAVTDLTTGLYTSNSIMA 180
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAG-IEGKRWGTSHANVVPHQVFKTS 455
ALL + +TGKGQ ID L Q + L N+ ++ L +G + RWGT+H ++VP++ FKT
Sbjct: 181 ALLSRARTGKGQHIDVALSDCQTATLANIASSSLISGKKDSGRWGTAHPSIVPYRAFKTK 240
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHL 500
+G + IG G+D+ + +C ++ D ++ T A +A + L
Sbjct: 241 DGDILIGGGNDRLFGILCDGLDKPQWKDDAKFKTNADRVAHRNEL 285
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 80/139 (57%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ D ++ T A RV +R L EIEA T ++TT+EWL F+G PYA +N
Sbjct: 257 LCDGLDKPQWKDDAKFKTNADRVAHRNELEAEIEAITQQRTTQEWLETFEGSGMPYAAIN 316
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I H + +V EI HE G IK+V V +S TQP +R PPP LG+HT+ +L
Sbjct: 317 DIQGTLNHSHTKARDMVIEIDHEYCGPIKMVNTPVKWSETQPFMRIPPPMLGQHTNEILG 376
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ L E+ IA LK++ ++
Sbjct: 377 EHLGLSESDIAALKDQGVV 395
>gi|71279852|ref|YP_271312.1| CAIB/BAIF family protein [Colwellia psychrerythraea 34H]
gi|71145592|gb|AAZ26065.1| CAIB/BAIF family protein [Colwellia psychrerythraea 34H]
Length = 390
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 127/295 (43%), Positives = 188/295 (63%), Gaps = 9/295 (3%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTEL 270
PL+ +++LDL+RI+AGP+ T +LAD GAEV K+E+P GD+ R WGPP++ +T
Sbjct: 4 PLTGIKVLDLSRILAGPWATQVLADYGAEVWKIERPEKGDDTRHWGPPYVKDEQGEDTAE 63
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
S Y+ NR KKS+ VD + +GQ I L Q D++VEN+ G L + L Y+ + +I
Sbjct: 64 SAYYLAANRGKKSIEVDMTSADGQAAIYKLVAQADIVVENYKVGGLKKYGLDYESIKKIR 123
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLAT 386
+IYCS+TGFG GPY +R GYD + ++GGL+ ITG P G P KVG+A+ DL T
Sbjct: 124 KDVIYCSITGFGQDGPYANRAGYDAMIQAMGGLMSITGEKDSLPGGGPQKVGVATTDLMT 183
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANV 446
G+YA ++AAL H+ +T +GQ+ID LL TQV+ L N G++YL +G +R G++H N+
Sbjct: 184 GMYAVSGILAALYHRTQTNEGQQIDIALLDTQVACLANQGSSYLVSGDVPQRLGSAHPNI 243
Query: 447 VPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI 501
VP+Q K +GY+ + G+D Q+Q C V+ + + ++ T AL + LI
Sbjct: 244 VPYQAMKVQDGYILLAVGNDDQFQKCCNVLGCIEVGENMQFTTNALRVKHRETLI 298
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 62/119 (52%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C V+ + + ++ T ALRV++RE L +E+ +++ + WL V P +NS
Sbjct: 270 CNVLGCIEVGENMQFTTNALRVKHRETLIPLLESYFIKQKLDYWLAALSEVHVPCGPINS 329
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I +VF + I+ K+ E+ H G + VG V +S T PP LG+HTD +LK
Sbjct: 330 IDRVFENPQIKHRKMAFELDHPTAGKVPQVGNPVRFSQTPITYHAAPPTLGQHTDEILK 388
>gi|339504538|ref|YP_004691958.1| CoA-transferase, family III [Roseobacter litoralis Och 149]
gi|338758531|gb|AEI94995.1| putative CoA-transferase, family III [Roseobacter litoralis Och
149]
Length = 402
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 125/279 (44%), Positives = 182/279 (65%), Gaps = 6/279 (2%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTG-DECRKWGPPF-LNN----TEL 270
L + +LDL+RI+AGP T LL DLGA V+KVE P TG D+ R WGP + LNN T+L
Sbjct: 11 LDGLVVLDLSRILAGPTATQLLGDLGATVLKVENPKTGGDDTRGWGPNYALNNDGSRTDL 70
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
S YF NRNK+SV +D T +GQ+ ++ LA + DV++EN+ PG L++ L + L +
Sbjct: 71 SAYFMAANRNKQSVSIDLSTEDGQKTVQKLAARADVVIENYKPGGLEKYGLDHAALCAAH 130
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYA 390
L+YCS++GFG GP +D+PGYD++A GG++ +TG P+G P KVG+ D+ G+YA
Sbjct: 131 PALVYCSISGFGHTGPNRDQPGYDLMAQGYGGIMSLTGEPEGQPMKVGVGIADVMCGMYA 190
Query: 391 HGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQ 450
++AAL H+ TG+GQ ID +L+ Q++ LIN G NYL +G R G +H N+VP++
Sbjct: 191 TIGILAALRHRDATGEGQHIDLSLVDAQMAWLINEGTNYLTSGKLPVRRGNAHPNIVPYE 250
Query: 451 VFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
F S+G+V + G+D Q+ C V+ +A D R+ T
Sbjct: 251 AFGCSDGHVLVAVGNDAQFARFCDVLGCPEMAADTRFTT 289
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 2/124 (1%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C V+ +A D R+ T R+ENR++L I + T + + V P +N
Sbjct: 272 FCDVLGCPEMAADTRFTTNLARIENRDVLIPLIAERLSGITKADVIARLHAVKVPVGPIN 331
Query: 61 SISQVFADEHIQDIKLVKEISHE--KYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
++++ + + +V+E++ + G ++++G + S T PPP G+ T+ V
Sbjct: 332 TVAEALHSDQAKARGVVQEMAAPGVQGGTVQLLGNPLKLSRTPVRYDRPPPRFGQDTETV 391
Query: 119 LKDL 122
L+D
Sbjct: 392 LRDF 395
>gi|352100602|ref|ZP_08958189.1| L-carnitine dehydratase/bile acid-inducible protein F [Halomonas
sp. HAL1]
gi|350601022|gb|EHA17077.1| L-carnitine dehydratase/bile acid-inducible protein F [Halomonas
sp. HAL1]
Length = 408
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 133/284 (46%), Positives = 177/284 (62%), Gaps = 10/284 (3%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTEL 270
PL+ +R+LDL+R++AGP+CT +LAD+GAEVIK+E P+ GD+ R WGPP+L N+T
Sbjct: 4 PLTGLRVLDLSRVMAGPWCTQILADMGAEVIKIEHPLLGDDTRHWGPPWLKDKEGNDTRE 63
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
S Y+ NR K SV VD PEGQ ++++LA + D+LVENF G L L Y L IN
Sbjct: 64 SAYYLSANRGKHSVTVDIGQPEGQALVRELAAESDILVENFKSGGLACKGLDYATLEAIN 123
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPC----KVGIASIDLAT 386
LIYCS+TGFG GP GYD + + GL+ ITG DG P +VG+A DL T
Sbjct: 124 PSLIYCSITGFGQTGPMASMAGYDYLIQAQAGLMSITGAADGEPGAGPQRVGMAVSDLTT 183
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANV 446
G+ A A++ AL H++ TG GQ ID LL QVS L N NY +G R G H N+
Sbjct: 184 GMNATIAILGALHHRHATGLGQYIDMALLDVQVSWLANQALNYFCSGTPPTRTGEYHPNL 243
Query: 447 VPHQVFKTSNGY-VTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
VP+Q F T++G V I G+D Q++ C+ + LA+DPR+ T
Sbjct: 244 VPYQPFPTADGEKVIIAIGNDGQFKRFCEAVGRPELAVDPRFST 287
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 74/139 (53%), Gaps = 1/139 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+ + LA+DPR+ T RV++R L + T +T+ EW+ + +S P +
Sbjct: 270 FCEAVGRPELAVDPRFSTNPERVKHRLELIPLMVQITQRRTSHEWIEMLGAISVPCGPIQ 329
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I+QVFAD +Q + E+ + G + V + YS T E PPP LGE TD VL+
Sbjct: 330 NIAQVFADPQVQARNMQIELETDT-GTVPGVANPIKYSRTPLEYHKPPPRLGEDTDSVLE 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
LL+ I+ L++K ++
Sbjct: 389 RLLHKGAEEISALRQKGVV 407
>gi|377808104|ref|YP_004979296.1| hypothetical protein BYI23_C007120 [Burkholderia sp. YI23]
gi|357939301|gb|AET92858.1| hypothetical protein BYI23_C007120 [Burkholderia sp. YI23]
Length = 407
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 132/280 (47%), Positives = 182/280 (65%), Gaps = 9/280 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
LS +R+LDL+R++AGP+ + +L DLGA+VIKVE+P GD+ R W PP++ + T S
Sbjct: 5 LSQLRVLDLSRVLAGPWASQILGDLGADVIKVERPGAGDDTRTWAPPYVKDAQGEPTRES 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF C NRNKKSV +DF EGQ ++++LA+ DVL+ENF L + L Y L E+N
Sbjct: 65 AYFMCTNRNKKSVTIDFTQAEGQALVRELARNSDVLIENFKVDGLKQYGLDYATLREVNP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATG 387
+L+YCS+TGFG GPY R GYD + +GGL+ +TG DG P KVG+A D+ TG
Sbjct: 125 RLVYCSITGFGQTGPYAQRAGYDFLIQGLGGLMSVTGRRDGEDGEGPLKVGVALTDVMTG 184
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LYA A++AA+ H+ + G+GQ ID +LL V+ L N NYL+ GI KR G +H NVV
Sbjct: 185 LYAAIAILAAVSHRGEHGEGQHIDMSLLDVGVACLANQAMNYLHTGIAPKRMGNAHPNVV 244
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
P+Q F T++G + I G+D Q+ +C + LA D RY
Sbjct: 245 PYQDFPTADGDMIIAVGNDGQFARLCHALGRPELATDARY 284
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 72/139 (51%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + LA D RY RV NR+ L + + T ++TT++W+ +G + P +N
Sbjct: 269 LCHALGRPELATDARYTNNEARVHNRDTLIQALRGLTTQRTTDDWVARLEGANVPCGPIN 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ +VF D + + + H G + +V + S T E R PP LGEHT VL+
Sbjct: 329 DLERVFRDPQVIARNVRIAMDHPVAGSVPLVASPMRLSATPVEYRHAPPVLGEHTRAVLR 388
Query: 121 DLLNYDETTIAKLKEKKIL 139
DLL+ D+ + +L ++++
Sbjct: 389 DLLHLDDAALERLAAERVI 407
>gi|118473524|ref|YP_890896.1| CAIB/BAIF family protein [Mycobacterium smegmatis str. MC2 155]
gi|399990878|ref|YP_006571229.1| L-carnitine dehydratase/bile acid-inducible protein F
[Mycobacterium smegmatis str. MC2 155]
gi|441218378|ref|ZP_20977585.1| L-carnitine dehydratase/bile acid-inducible protein F
[Mycobacterium smegmatis MKD8]
gi|118174811|gb|ABK75707.1| CAIB/BAIF family protein [Mycobacterium smegmatis str. MC2 155]
gi|399235441|gb|AFP42934.1| L-carnitine dehydratase/bile acid-inducible protein F
[Mycobacterium smegmatis str. MC2 155]
gi|440623623|gb|ELQ85497.1| L-carnitine dehydratase/bile acid-inducible protein F
[Mycobacterium smegmatis MKD8]
Length = 367
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 116/273 (42%), Positives = 182/273 (66%), Gaps = 2/273 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L V + D +R++AGP+ TM+LAD GAEVIK+E+P TGD+ R+WGPP+ ++T ++TYF
Sbjct: 6 LEGVVVADFSRVLAGPYATMMLADFGAEVIKIERPGTGDDTRQWGPPY-DSTGVATYFNS 64
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
VNRNK+SV +D + EG++ ++L ++ D++VENF PG +++L LGY + I +IYC
Sbjct: 65 VNRNKRSVALDLGSTEGREQARELIRRADIVVENFRPGTMEKLGLGYDDVRAIRPDVIYC 124
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S+TGFG G PGYD++ ++GGL+ +TG G P K G+A +D+ G++A ++
Sbjct: 125 SITGFGHGG-GAALPGYDLLVQAVGGLMSVTGTEPGDPTKAGVALVDVLAGMHALSGILV 183
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
AL H+ +TG+GQ++D NL S +S ++N + YL AG+ G H ++ P+Q F T++
Sbjct: 184 ALAHRDRTGEGQRVDTNLFSVLLSSMVNQASGYLGAGVVPGIMGNRHPSITPYQTFDTAD 243
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+ I G+DKQ++ V+ LA DPR+ T
Sbjct: 244 RPIAIAVGNDKQFRAFAAVIGSPELADDPRFST 276
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 46/111 (41%), Gaps = 3/111 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
V+ LA DPR+ T RV +R++LC IEA K + W V P +N
Sbjct: 259 FAAVIGSPELADDPRFSTNPQRVAHRDVLCPLIEAALKAKGADHWYHELTAVGVPAGPIN 318
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPAL 111
+S+ FA I+ V ++ G V + S T R PP L
Sbjct: 319 DLSEAFAFAEELGIEAVVQMPD---GPTPQVANPITLSATPVTYRNSPPPL 366
>gi|332284365|ref|YP_004416276.1| acyl-CoA transferase/carnitine dehydratase [Pusillimonas sp. T7-7]
gi|330428318|gb|AEC19652.1| putative acyl-CoA transferase/carnitine dehydratase [Pusillimonas
sp. T7-7]
Length = 396
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 126/280 (45%), Positives = 177/280 (63%), Gaps = 7/280 (2%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE---LSTY 273
L ++++DL+RI+AGP+CT LADLGAEVIK+E+P +GD+ R WGPP+L + E LS Y
Sbjct: 6 LKGIKVVDLSRILAGPWCTQNLADLGAEVIKIERPGSGDDTRGWGPPYLESVEGDTLSAY 65
Query: 274 FTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQL 333
FTC NR KKSV +DF +Q + L ++ DVLVENF G L + L Y L +N +L
Sbjct: 66 FTCCNRGKKSVALDFTQEADRQQLLALIREADVLVENFRVGTLKKYGLDYDSLKAVNPRL 125
Query: 334 IYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP----PCKVGIASIDLATGLY 389
IY S+TG+G GP RPGYD I +GGL+ TG DG P + G+A +D+ TG+Y
Sbjct: 126 IYASITGYGQTGPKAHRPGYDYIFQGLGGLMSYTGPADGELGAGPLRTGVAVVDITTGMY 185
Query: 390 AHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPH 449
A AV+AAL + +TG+G +D LL V+M N AN+L +G +R G +H N+ P+
Sbjct: 186 ATSAVLAALFQRVQTGQGTWLDLALLDVAVAMNANQAANFLVSGASPQRTGNAHPNLAPY 245
Query: 450 QVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
+VF+ S+G+ + G+D Q+ C + LA D R+ T
Sbjct: 246 EVFRASDGFFILAIGNDTQFARFCDFCGMPELAQDVRFQT 285
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C + LA D R+ T + R+ + L + K + W + + VN
Sbjct: 268 FCDFCGMPELAQDVRFQTNSGRINHLAELRNILGEVLATKPRQYWTEALDTLGISWGSVN 327
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIV-GPAVAYSLTQPEVRTPPPALGEHTDYVL 119
S+ +VF DE + +++++ +H K G+I +V P +A + PP LGEHT+ VL
Sbjct: 328 SLEEVFQDEQVLHRQMLQKTTHPKLGEINLVKNPMLAGNQEDSTNPAAPPLLGEHTESVL 387
>gi|146276119|ref|YP_001166278.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhodobacter
sphaeroides ATCC 17025]
gi|145554360|gb|ABP68973.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhodobacter
sphaeroides ATCC 17025]
Length = 381
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 126/289 (43%), Positives = 183/289 (63%), Gaps = 3/289 (1%)
Query: 214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN--NTELS 271
S PL+ VR+++L RI+AGP+ +LADLGA+V+KVE P GD+ R+WGPPF+ +
Sbjct: 2 STPLAGVRVVELARILAGPWAGQVLADLGADVVKVEAP-EGDDTRRWGPPFIEREGDRSA 60
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
YF NR K+SV DF+T EGQQ ++ L + DV++ENF G L + L + L E+N
Sbjct: 61 AYFHAANRGKRSVTADFRTAEGQQTVRRLVAEADVVIENFKVGGLAKYGLDWPSLREVNP 120
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+L+YCS+TGFG GPY R GYD I + GL+ +TG +G P KVG+A D+ TG+YA
Sbjct: 121 RLVYCSITGFGQDGPYAHRAGYDFIIQGMAGLMSVTGAAEGQPQKVGVAVTDVFTGIYAA 180
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A++AAL + TG+GQ+ID L+ ++ N NYL G ++ G H N+ P+ V
Sbjct: 181 TAILAALHQRASTGRGQQIDMALMDVATGIMANQAMNYLATGTAPRKMGNEHPNLAPYAV 240
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHL 500
F ++G++ I TG+D QY+ +C ++ L LA P +LT A +A + L
Sbjct: 241 FDCADGWIIIATGNDGQYRRLCGLLGLPGLATAPAFLTNADRVANRAEL 289
>gi|347758689|ref|YP_004866251.1| coA-transferase III family protein [Micavibrio aeruginosavorus
ARL-13]
gi|347591207|gb|AEP10249.1| coA-transferase III family protein [Micavibrio aeruginosavorus
ARL-13]
Length = 407
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 121/276 (43%), Positives = 180/276 (65%), Gaps = 5/276 (1%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-----TELS 271
LSN+R+LDL+R++AGP CT +L DLGA++IKVE+P GD+ RKWGPP+L + T S
Sbjct: 5 LSNIRVLDLSRVLAGPVCTQILGDLGADIIKVERPGEGDDTRKWGPPYLLDENGAPTSES 64
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NRNK+S+ VD T EGQ+II L ++ DV++ENF G LD+ LG+ + + +
Sbjct: 65 AYYLSANRNKRSLAVDITTTEGQEIIHALLEKSDVMIENFKVGGLDKYGLGWTSIQKRHP 124
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+I S+TGFG GP PGYD++ ++GG++ ITG P G P K+G+A D+ TGLYA
Sbjct: 125 HIICASITGFGHTGPLASEPGYDLMVQAMGGMMAITGEPGGQPMKIGVALSDVMTGLYAT 184
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
++AAL + +TGKGQ +D LL ++ L N+ YL +G KR G +HA +VP+Q
Sbjct: 185 IGILAALNARKETGKGQHVDVALLDCTLAGLTNLAQYYLTSGTVAKRQGNAHATIVPYQA 244
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
F+ ++G++ I G+D Q++ + + A D R+
Sbjct: 245 FEAADGWMVIAVGNDTQFKRLATALGHAEWADDERF 280
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 1/130 (0%)
Query: 11 ALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEH 70
A D R+ RV++R++L IE+ ++ E W+ + + + P VN + QVFA
Sbjct: 275 ADDERFARNQARVKHRDILVPMIESAMKTRSVESWVSLCRDIDVPAGPVNKMDQVFAMAQ 334
Query: 71 IQDIKLVKEISHE-KYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETT 129
+ + E++H I +VG + S T + R PPP GEHT +L+ LL D+
Sbjct: 335 VDARAMNIEMNHPLSPTPIHLVGSPLKLSDTSVDYRLPPPICGEHTRDILQSLLQMDDAD 394
Query: 130 IAKLKEKKIL 139
I L + I+
Sbjct: 395 IQALMTRNIV 404
>gi|325293491|ref|YP_004279355.1| L-carnitine dehydratase [Agrobacterium sp. H13-3]
gi|325061344|gb|ADY65035.1| L-carnitine dehydratase [Agrobacterium sp. H13-3]
Length = 400
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 117/278 (42%), Positives = 177/278 (63%), Gaps = 4/278 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE----LS 271
PLS +R+++L R++AGP+ +LAD+GA+VIKVE GD+ R WGPPF+ + + +
Sbjct: 10 PLSGIRVIELARVLAGPWAGQMLADMGADVIKVENSEGGDDTRAWGPPFVESADGENLSA 69
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NR K+S+ D KT EG +++ L + DV++ENF G L + L Y+ L +N
Sbjct: 70 AYYHATNRGKRSIVADLKTAEGCALVRRLVRTADVVIENFKRGGLAKYGLDYESLRVLNP 129
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+LIYCS+TGFG GPY D GYD I + G + ITG PDG P K G+A D+ TG+Y+
Sbjct: 130 KLIYCSITGFGQTGPYADFAGYDYIVQGMSGFMSITGEPDGQPMKAGVAVADIFTGIYSV 189
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A+ AAL+H ++G+GQ ID LL Q ++L N NYL +G R G +H N+ P++V
Sbjct: 190 SAIQAALIHAMRSGEGQHIDMALLDVQSAVLANQNMNYLISGNAPVRLGNAHPNISPYEV 249
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
T +G++ + G+D Q++ +CK++ ++ A D R+ T
Sbjct: 250 MPTEDGFLILAVGNDGQFRRLCKILGIEATADDERFAT 287
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 62/129 (48%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+CK++ ++ A D R+ T RV ++ + + + +T++ + L + + P +N
Sbjct: 270 LCKILGIEATADDERFATNKARVAHKAEVRRIVSTETLKWQKRDLLTACEQNAVPAGPIN 329
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
SI ++FAD +Q L ++ + I V + S T P P LGEH VL
Sbjct: 330 SIEEMFADPQVQARGLRVDLEAQDGTVIPGVRTPIIMSQTPLRYERPSPKLGEHQAQVLA 389
Query: 121 DLLNYDETT 129
+L N + TT
Sbjct: 390 ELENIERTT 398
>gi|399993932|ref|YP_006574172.1| CoA-transferase, family III [Phaeobacter gallaeciensis DSM 17395 =
CIP 105210]
gi|398658487|gb|AFO92453.1| CoA-transferase, family III [Phaeobacter gallaeciensis DSM 17395 =
CIP 105210]
Length = 375
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 123/282 (43%), Positives = 177/282 (62%), Gaps = 3/282 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL--NNTELSTY 273
PL+ +++++L RI+AGP+ LADLGAEVIKVE P GD+ R+WGPPF+ + + + Y
Sbjct: 3 PLAGLKVVELARILAGPWIGQSLADLGAEVIKVESP-EGDDTRRWGPPFIERDGDKTAAY 61
Query: 274 FTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQL 333
+ NR K V DF+T +G+Q + +L + D+L+ENF G L + L Y L +N +L
Sbjct: 62 YYAANRGKSCVTADFRTKDGKQTVLELIRDADILIENFKVGGLAKYGLDYDSLKAVNPRL 121
Query: 334 IYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGA 393
IYCSVTGFG GPY R GYD + + GL+ ITG P+G P KVG+A D+ TGLY
Sbjct: 122 IYCSVTGFGQDGPYAARAGYDFLLQGMSGLMSITGAPEGEPQKVGVAITDIVTGLYGTIG 181
Query: 394 VMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFK 453
++AA+ ++ TG+GQ ID +LL ++L N NYL G R G H N+ P+QV
Sbjct: 182 ILAAVEQRHSTGRGQHIDMSLLDCATAVLANQNMNYLATGTSPTRMGNEHPNIAPYQVMA 241
Query: 454 TSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILA 495
+G+V + G+D Q+ +C V+N+ LA DPR+ + L +A
Sbjct: 242 VRDGHVILAVGNDGQFARLCAVLNMAGLADDPRFASNQLRVA 283
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C V+N+ LA DPR+ + LRV NR L + A + + L + + P +N
Sbjct: 260 LCAVLNMAGLADDPRFASNQLRVANRVELTPMLAAALAQWGQADLLAALEAATVPAGPIN 319
Query: 61 SISQVFADEHIQ 72
+I Q F D I+
Sbjct: 320 TIGQAFDDPQIK 331
>gi|390449756|ref|ZP_10235358.1| L-carnitine dehydratase/bile acid-inducible protein F
[Nitratireductor aquibiodomus RA22]
gi|389663555|gb|EIM75078.1| L-carnitine dehydratase/bile acid-inducible protein F
[Nitratireductor aquibiodomus RA22]
Length = 400
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 128/282 (45%), Positives = 176/282 (62%), Gaps = 6/282 (2%)
Query: 212 NPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE-- 269
NP PL VR+++L RI+AGP+ +LADLGA+VIKVE P GD+ RKWGPPF+ +
Sbjct: 12 NP--PLKGVRVIELARILAGPWAGQVLADLGADVIKVENPNGGDDTRKWGPPFVEGADGE 69
Query: 270 --LSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLS 327
+ Y+ NR K+S+ +DF PE + +K L DVL+ENF G L + L Y+ L
Sbjct: 70 NLSAAYYHSCNRGKRSIALDFSRPEEAEKLKKLIATADVLIENFKLGGLKKYGLDYESLK 129
Query: 328 EINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATG 387
IN +L+YCS+TGFG GPY R GYD I + GL+ ITG P G P KVG+A D+ TG
Sbjct: 130 AINPRLVYCSITGFGQTGPYAPRAGYDFIIQGMSGLMSITGAPGGEPQKVGVAVSDIFTG 189
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
LY+ A+ AAL H TG+GQ ID LL +QV++L N NYL +G + G +H N+
Sbjct: 190 LYSVIAIQAALRHAEATGEGQMIDMALLDSQVAVLANQNMNYLISGNSPVQMGNAHMNIA 249
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
P++V +G++ + G+D Q+Q CK++ L L D R+ T
Sbjct: 250 PYEVLPVKDGHIILAVGNDGQFQRFCKIVGLGDLPEDERFAT 291
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 54/122 (44%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
CK++ L L D R+ T RV NR L + I A E+L + P + +N
Sbjct: 274 FCKIVGLGDLPEDERFATNPARVANRVALRERIVATLTGWEKAEFLGKCDANAVPASPIN 333
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I ++F D ++ + + + V +A S T P P LGEHT +L+
Sbjct: 334 TIEEMFDDPQVKARGMQLSLDDGHGTALPSVRAPIALSKTPLSYERPSPRLGEHTAEILR 393
Query: 121 DL 122
++
Sbjct: 394 EI 395
>gi|90419079|ref|ZP_01226990.1| putative acyl-CoA transferase [Aurantimonas manganoxydans SI85-9A1]
gi|90337159|gb|EAS50864.1| putative acyl-CoA transferase [Aurantimonas manganoxydans SI85-9A1]
Length = 393
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 121/276 (43%), Positives = 175/276 (63%), Gaps = 3/276 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL--NNTELSTY 273
P + +++L+L RI+AGP+ LADLGA+VIKVE P GD+ R WGPPF+ + + Y
Sbjct: 19 PHAGLKVLELARILAGPWIGQTLADLGADVIKVESP-AGDDTRGWGPPFVERDGERTAAY 77
Query: 274 FTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQL 333
F NR K+SV DF T EG+++++ LA + DVL+ENF G L + L Y+ L IN +L
Sbjct: 78 FHACNRGKRSVVADFGTEEGRELVRSLAAEADVLIENFKVGGLAKFGLDYESLKAINPRL 137
Query: 334 IYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGA 393
+YCSVTGFG GPY R GYD + +GG++ +TG P G P K+G+A D+ TGLY A
Sbjct: 138 VYCSVTGFGQDGPYAGRAGYDFMIQGMGGIMSLTGDPAGEPQKIGVAFADIFTGLYGTIA 197
Query: 394 VMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFK 453
+ AAL + +TG+G+ +D L +L N N+ G R G +H N+VP+QVF
Sbjct: 198 IQAALADRERTGRGEYVDMALYDCMAGVLANQALNFFATGAAPSRLGNAHPNIVPYQVFP 257
Query: 454 TSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
++G++ I G+D+Q+ +C V++L L+ DP Y T
Sbjct: 258 VADGHLIIACGNDRQFARLCAVLDLSQLSDDPLYAT 293
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 49/121 (40%), Gaps = 5/121 (4%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C V++L L+ DP Y T RV NR+ L + ++ L + V P +N
Sbjct: 276 LCAVLDLSQLSDDPLYATNEARVANRDALTPILAGAIAAWRRDDLLAALEPVGVPSGPIN 335
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++ VFAD I V G + V + Y + + P P LGEH
Sbjct: 336 DVADVFADPQI-----VHRGMQIAPGGMAGVRSPITYGEAELSLERPAPKLGEHQGAGFG 390
Query: 121 D 121
D
Sbjct: 391 D 391
>gi|153009499|ref|YP_001370714.1| L-carnitine dehydratase/bile acid-inducible protein F [Ochrobactrum
anthropi ATCC 49188]
gi|151561387|gb|ABS14885.1| L-carnitine dehydratase/bile acid-inducible protein F [Ochrobactrum
anthropi ATCC 49188]
Length = 381
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 119/287 (41%), Positives = 184/287 (64%), Gaps = 3/287 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN--NTELSTY 273
PL +++++L RI+AGP+ L+DLGA+VIKVE P GD+ RKWGPPF++ + Y
Sbjct: 5 PLDGLKVVELARILAGPWVGQTLSDLGADVIKVESP-EGDDTRKWGPPFIDVEGERSAAY 63
Query: 274 FTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQL 333
F NR K+S+ DF+T EG+++++ L DV++ENF G LD+ +L Y+ L IN +L
Sbjct: 64 FHACNRGKRSITADFRTDEGRELVRQLVADADVVIENFKLGGLDKYSLDYESLKAINPRL 123
Query: 334 IYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGA 393
IYCS+TGFG GPY +R GYD + +GG++ +TG PDG P K+G+A D+ TGLY+ A
Sbjct: 124 IYCSITGFGHTGPYAERAGYDFMIQGMGGIMDLTGEPDGEPQKIGVAFADIFTGLYSVIA 183
Query: 394 VMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFK 453
+ +AL+ + +TG GQ ID L ++L N N+L +G+ KR G +H N+ P+Q
Sbjct: 184 IQSALIMRERTGIGQHIDMALFDCMSAVLANQAMNFLASGVSPKRMGNAHPNIAPYQTLP 243
Query: 454 TSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHL 500
S+GY I G+D Q+ + ++ + +A D R+++ + +A + L
Sbjct: 244 VSDGYFIIACGNDGQFGKLTSLLGIGDIAADERFVSNSARVANRAAL 290
>gi|138894127|ref|YP_001124580.1| hypothetical protein GTNG_0453 [Geobacillus thermodenitrificans
NG80-2]
gi|196250643|ref|ZP_03149332.1| L-carnitine dehydratase/bile acid-inducible protein F [Geobacillus
sp. G11MC16]
gi|134265640|gb|ABO65835.1| Conserved hypothetical protein [Geobacillus thermodenitrificans
NG80-2]
gi|196209862|gb|EDY04632.1| L-carnitine dehydratase/bile acid-inducible protein F [Geobacillus
sp. G11MC16]
Length = 393
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 129/273 (47%), Positives = 181/273 (66%), Gaps = 2/273 (0%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L VR+LDL+R++AGP+ TM+L DLGA+VIKVE P D+ R WGPPF N +S Y+T
Sbjct: 5 LDGVRVLDLSRVLAGPYATMILGDLGADVIKVEAPGGSDDTRFWGPPFKNG--MSAYYTA 62
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
VNRNK+S+ D KT EG++ + LA+ DV++ NF G +++ LGY+ LS +N +LIYC
Sbjct: 63 VNRNKRSITADLKTEEGRKTVCRLAETADVVIHNFKTGTMEKWGLGYEELSRLNPRLIYC 122
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
S+TGFG GP GYD I ++ G + I G PD P KVG+A D+ TGLYA A+ A
Sbjct: 123 SITGFGETGPLAPLAGYDYIIQAMSGWMSINGTPDTGPLKVGVAVTDVFTGLYAAIAIEA 182
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
ALL + KTG GQKID +L + L+NV ANYL +G K G H N+VP+ ++ S+
Sbjct: 183 ALLAREKTGCGQKIDLSLFDCAIGALVNVAANYLLSGNIPKPLGNEHPNIVPYSTYEASD 242
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
G + I G+D+Q+Q +C +++ + + DPR+ T
Sbjct: 243 GPIVIAVGNDRQFQALCSLLSDRSIGTDPRFQT 275
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 54/116 (46%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C +++ + + DPR+ T RV +R+ L + + + ++T EW + P V
Sbjct: 258 LCSLLSDRSIGTDPRFQTNPGRVAHRDELNRRLNEEIKQRTRAEWQRLLAEKGIPCGPVQ 317
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTD 116
++ ++F +++ + H G + +V + S T R PPP GEH +
Sbjct: 318 TLDELFRHPQTAAREMMVIMHHPTVGSLPLVASPLKLSETPVSYRLPPPLAGEHNN 373
>gi|163857520|ref|YP_001631818.1| acyl-CoA transferase [Bordetella petrii DSM 12804]
gi|163261248|emb|CAP43550.1| Probable acyl-CoA transferase/carnitine dehydrastase [Bordetella
petrii]
Length = 415
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 127/280 (45%), Positives = 183/280 (65%), Gaps = 9/280 (3%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTELS 271
LS++R+LDL+RI+AGP+CT LADLGAEVIKVE+P +GD+ R WGPP+ N+ S
Sbjct: 13 LSHIRVLDLSRILAGPWCTQNLADLGAEVIKVERPGSGDDTRAWGPPWTKDAHGNDAADS 72
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
TY+ NR KKSV +D + +GQ+++++LA + DV+VEN+ G L R L Y L +N
Sbjct: 73 TYYAAANRGKKSVTIDIASADGQRLVRELAARSDVVVENYKIGDLKRYGLDYDSLRAVNP 132
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGH----PDGPPCKVGIASIDLATG 387
L+YCS+TG+G GP +PGYD + +IGGL+ ITG P G P K GIA D+ TG
Sbjct: 133 GLVYCSITGYGQSGPSARKPGYDFVFQAIGGLMSITGEHDSLPGGGPQKTGIAIADVITG 192
Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
+YA A++AAL H+ ++G+GQ ID LL V++ N Y G R+G +HA++V
Sbjct: 193 MYATIAILAALNHRTESGRGQYIDMALLDCIVALGGNQVTGYFANGKIPHRYGNAHASLV 252
Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
P+QVF ++G + + G+D Q+Q C+ ++ LA D R+
Sbjct: 253 PYQVFAVADGEIVVAVGNDVQWQRYCQAIDRPDLAADDRW 292
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 65/138 (47%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C+ ++ LA D R+ R+ R L E+ + + ++W+ + P ++N+
Sbjct: 278 CQAIDRPDLAADDRWAKVKGRIVGRGELVPELARTMLTRGADDWIARLEAADVPCGRINN 337
Query: 62 ISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKD 121
QVF D +Q L ++ G + + + T + PPP++G+ TDYVL+
Sbjct: 338 YEQVFQDPQVQYRGLRVDMPKPDGGVVSTIASPLRLCGTPVKYELPPPSVGDSTDYVLQQ 397
Query: 122 LLNYDETTIAKLKEKKIL 139
LL Y I LK+ K++
Sbjct: 398 LLGYGPEEIQALKQSKVV 415
>gi|254474790|ref|ZP_05088176.1| caib/baif family protein [Ruegeria sp. R11]
gi|214029033|gb|EEB69868.1| caib/baif family protein [Ruegeria sp. R11]
Length = 385
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 121/276 (43%), Positives = 181/276 (65%), Gaps = 6/276 (2%)
Query: 220 VRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTG-DECRKWGPPFL-----NNTELSTY 273
+++LDL+RI+AGP CT +L DLGA V+K+E P +G D+ R+WGPP++ N ++LS Y
Sbjct: 1 MKVLDLSRILAGPTCTQMLGDLGATVLKIENPRSGGDDTRQWGPPYVVDAKGNQSDLSAY 60
Query: 274 FTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQL 333
F NRNK+SV VD T +GQ I+ LA D+L+ENF PG L + L Y L + L
Sbjct: 61 FMSANRNKRSVEVDITTSDGQATIRRLAAHADILLENFKPGGLRKYGLDYDSLRKDFPHL 120
Query: 334 IYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGA 393
+Y S++G+G GP +PGYD++A GG++ +TG PDG P KVG+ D+ G+YA
Sbjct: 121 VYGSISGYGQTGPNAHKPGYDLMAQGYGGIMSLTGEPDGRPMKVGVGIADVMCGMYACVG 180
Query: 394 VMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFK 453
++AAL HK +TG+GQ++D L+ Q++ LIN G LN G KR G H ++VP+ +++
Sbjct: 181 ILAALRHKEQTGEGQQVDIALVDAQIAWLINEGVATLNTGSAPKRRGNEHPSIVPYGLYE 240
Query: 454 TSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
T++G+V + G+D Q+ + + L+ LA DPR+ T
Sbjct: 241 TADGHVILAVGNDSQFGRFLQFLGLEGLARDPRFAT 276
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 3 KVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSI 62
+ + L+ LA DPR+ T R+E+R+ L I + TT+ + + P V ++
Sbjct: 261 QFLGLEGLARDPRFATNPARLEHRDALADIIVPAIRQHTTDAVIAAMEERKVPAGPVQTL 320
Query: 63 SQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDL 122
QVFA + + K+ E+ E G ++++G + S T R PP G TD + +D
Sbjct: 321 DQVFASDQVAARKMAIEMQSEA-GPVQLLGNPLKLSRTPVTYRHAPPTCGSSTDVLEQDG 379
Query: 123 LNYD 126
+D
Sbjct: 380 DPFD 383
>gi|189204948|ref|XP_001938809.1| CAIB/BAIF family protein [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187985908|gb|EDU51396.1| CAIB/BAIF family protein [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 396
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 125/277 (45%), Positives = 183/277 (66%), Gaps = 9/277 (3%)
Query: 225 LTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPF---LNNTE---LSTYFTCVN 278
+TR++AGP+CT +L DLGA+VIK+E P GD+ R WGPP+ LNN E S Y+ VN
Sbjct: 1 MTRVLAGPYCTQILGDLGADVIKIEHPTRGDDTRAWGPPYAKYLNNQEGPGESAYYLGVN 60
Query: 279 RNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSV 338
RNK+S+ + F+ P G I+ L K+CDVLVEN++PG L + + Y +S+IN +IY S+
Sbjct: 61 RNKRSIGLSFQHPAGVDILHRLVKECDVLVENYLPGSLAKYAMDYDTVSKINPGIIYASI 120
Query: 339 TGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAAL 398
TG+G GPY++R GYD++ + GL+HITG DGPP KVG+A DL TGLY +++AAL
Sbjct: 121 TGYGQTGPYRNRAGYDVMVEAEFGLMHITGTRDGPPVKVGVAVTDLTTGLYTSNSIIAAL 180
Query: 399 LHKYKT--GKGQKIDCNLLSTQVSMLINVGANYLNAG-IEGKRWGTSHANVVPHQVFKTS 455
+ + KGQ ID L QV+ L N+ ++ L +G + RWGTSH ++VP++ FKT+
Sbjct: 181 FRRLRNPKSKGQHIDVALSDCQVATLANIASSSLISGQRDTGRWGTSHPSIVPYKAFKTA 240
Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
+G + +G G+D+ Y +C + LD ++ T A+
Sbjct: 241 DGDILLGGGNDRLYGVLCNRLGKPEWILDEKFKTNAM 277
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 82/139 (58%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + LD ++ T A+RV++R+ L + IE +T +KTT+E L +F+G PYA +N
Sbjct: 257 LCNRLGKPEWILDEKFKTNAMRVQHRDELEELIETETRKKTTKELLDVFEGSGMPYAAIN 316
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I EH+ +VKE+ H G IK+V V +S T+PE+R PPP LG+HTD +L
Sbjct: 317 DIQDTLNHEHVLARNMVKEVDHPTCGPIKLVNTPVKWSETKPEIRLPPPTLGQHTDEILS 376
Query: 121 DLLNYDETTIAKLKEKKIL 139
D L + + L+ + ++
Sbjct: 377 DTLGMSKDEVKGLRAEGVV 395
>gi|336270362|ref|XP_003349940.1| hypothetical protein SMAC_00832 [Sordaria macrospora k-hell]
Length = 438
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 127/290 (43%), Positives = 180/290 (62%), Gaps = 18/290 (6%)
Query: 207 ALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPF-- 264
++ S + +LPL R+LD+TR++AG EVIKVE PV GD+ R WGPP+
Sbjct: 34 SVRSADGTLPLEGYRVLDMTRVLAGEIL---------EVIKVEHPVRGDDTRAWGPPYAS 84
Query: 265 ------LNNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDR 318
+ S YF VNRNKKS+ + F+ P G +I++ LA +CD+LVEN+VPG L +
Sbjct: 85 YKSGSSMEGPGESAYFLGVNRNKKSLALSFQNPAGVEILQKLAAKCDILVENYVPGSLKK 144
Query: 319 LNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVG 378
L Y+ L +IN LIY S+TG+G GPY R GYD++ + GL+HITG DGPP KVG
Sbjct: 145 YGLDYETLRQINPALIYASITGYGQTGPYSSRAGYDVMVEAEFGLMHITGSRDGPPVKVG 204
Query: 379 IASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAG-IEGK 437
+A DL TGLY ++MAALL + KTG+GQ ID L Q + L N+ ++ L +G +
Sbjct: 205 VAVTDLTTGLYTSNSIMAALLARAKTGRGQWIDACLSDCQTATLANIASSCLVSGKKDSG 264
Query: 438 RWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
RWGT+H ++VP++ F+T +G + G G+D+ + +C + DPRY
Sbjct: 265 RWGTAHPSIVPYKAFETKDGDILFGGGNDRLFGILCDGLGRSEWKDDPRY 314
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 81/139 (58%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C + DPRY A RV NR L +EIE T KTT+EWL IF+G PYA +N
Sbjct: 299 LCDGLGRSEWKDDPRYKINAQRVANRVELEEEIENITRTKTTQEWLDIFEGKGLPYAAIN 358
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ EH +V E+ HE+ G IK+V V YS T P +R+PPP LG+HTD VL+
Sbjct: 359 DVLTTLTHEHTLARNMVVEVEHEECGPIKMVNSPVKYSETSPTIRSPPPTLGQHTDEVLR 418
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ + + IA+LKEK ++
Sbjct: 419 EHVGLSDEQIAQLKEKGVV 437
>gi|294939978|ref|XP_002782617.1| alpha methylacyl-CoA racemase, putative [Perkinsus marinus ATCC
50983]
gi|239894469|gb|EER14412.1| alpha methylacyl-CoA racemase, putative [Perkinsus marinus ATCC
50983]
Length = 607
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 125/266 (46%), Positives = 174/266 (65%), Gaps = 1/266 (0%)
Query: 224 DLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTCVNRNKKS 283
+LTRI+AGP+ M+LAD GAEVIKVE+P GD+ R WGPPF + S YF NRNK S
Sbjct: 193 NLTRILAGPYGGMMLADYGAEVIKVEKPGVGDDARAWGPPFTDKGRESAYFVAPNRNKHS 252
Query: 284 VCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGS 343
+ V+ KTPEGQQIIKDL K D+++EN+VPG L + L Y+ L + N L+Y S+TG+G
Sbjct: 253 IGVNLKTPEGQQIIKDLVKVSDIVIENYVPGTLAKYGLDYESLRKFNPALVYGSLTGYGD 312
Query: 344 KGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYK 403
GP KDRPGY ++ G++ TG D P K+G+A D+ GL+ HG V+AAL +
Sbjct: 313 TGPDKDRPGYALMVEGRCGMMACTGIGD-QPVKIGVAWTDILAGLHLHGGVLAALYNAKM 371
Query: 404 TGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNGYVTIGT 463
TG+G+ + C+LL +QVS + NV + YL G+E R GT H N+VP+ F T++G++ G
Sbjct: 372 TGQGRHVKCSLLESQVSAMANVASGYLIGGVECARMGTQHPNIVPYGAFPTADGHIVAGA 431
Query: 464 GSDKQYQDMCKVMNLQHLALDPRYLT 489
+D Q++ C V+ L D ++ T
Sbjct: 432 LNDAQWKSFCNVLGRPDLEQDEKFKT 457
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 21/163 (12%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGV----SFPY 56
C V+ L D ++ T R +R+ L + K TEEW+ + + +
Sbjct: 440 FCNVLGRPDLEQDEKFKTNEARCNHRDELNGILNEILKTKRTEEWMALLDALPHKERLAH 499
Query: 57 AQVNSISQVFADEHIQDIKLVKEISHEKYGD---------------IKIVGPAVAY--SL 99
++ ++ VF+D + + + H G I +VGPAV + +
Sbjct: 500 DKLQNMQGVFSDPQVLARGMKLTVEHATAGTGFVAIVLPHALCSGPIDVVGPAVKFEPAP 559
Query: 100 TQPEVRTPPPALGEHTDYVLKDLLNYDETTIAKLKEKKILGLI 142
++ E PPPALGEHT +VL+ L Y + IA+L E +I+ ++
Sbjct: 560 SKEEKSLPPPALGEHTKWVLQRCLGYSDEKIARLAEDRIVHIM 602
>gi|322372004|ref|ZP_08046546.1| crotonobetainyl-CoA:carnitine CoA-transferase /alpha-methylacyl-CoA
racemase 1 [Haladaptatus paucihalophilus DX253]
gi|320548426|gb|EFW90098.1| crotonobetainyl-CoA:carnitine CoA-transferase /alpha-methylacyl-CoA
racemase 1 [Haladaptatus paucihalophilus DX253]
Length = 408
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 119/286 (41%), Positives = 178/286 (62%), Gaps = 1/286 (0%)
Query: 207 ALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN 266
A E + PL + +LD +R++ GPFCTM L DLGA+VIK+E+P TGD+ R+W PP
Sbjct: 5 ARQPETETGPLDGITVLDASRVLVGPFCTMQLGDLGADVIKIERPGTGDQTREWHPPTYG 64
Query: 267 NTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHL 326
++ S Y+ VNRNK+S+ +D + EGQ + +DLA + DV+V NF G ++ L Y+ L
Sbjct: 65 ESDESAYYLSVNRNKRSMTLDLASDEGQTVFRDLASEADVVVSNFRVGTMEEWGLDYQTL 124
Query: 327 SEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLAT 386
E N L+YC+++G+G GP KDRP YD+I + GGL+ ITG DG P +VG+A D+
Sbjct: 125 REDNPGLVYCALSGYGEWGPDKDRPAYDLIMQAEGGLMSITGEADGSPVRVGVAIADIGA 184
Query: 387 GLYAHGAVMAALLHK-YKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHAN 445
G+YA A++AALL + G GQK+D +LL QV+ + + +NY G +R G+ H
Sbjct: 185 GMYATQAILAALLERELGDGTGQKVDVSLLDGQVAWMSYMASNYFATGTPPERMGSKHPT 244
Query: 446 VVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
+ P+Q + T++GYV I S + C+ ++ + L D R+ A
Sbjct: 245 LAPYQAYPTADGYVVIAVPSPNLWPKFCRAIDREDLIDDERFRDNA 290
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 1/139 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
C+ ++ + L D R+ A RVENR+ L +E E TT E + P V
Sbjct: 271 FCRAIDREDLIDDERFRDNASRVENRDELDALLEPTFAEFTTAEIVETMDDHGVPATDVK 330
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+ VF + + + +SH GD+++ G + S T VR PP LGEHT+ +L
Sbjct: 331 DMQDVFDNPQVNARNMQWSVSHPTAGDVEMAGSPMHLSKTPTRVRAHPPLLGEHTEEILS 390
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ Y E I +L ++ +L
Sbjct: 391 E-FGYTEADIERLSDEGVL 408
>gi|427824256|ref|ZP_18991318.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
gi|410589521|emb|CCN04592.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
Length = 399
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 126/281 (44%), Positives = 179/281 (63%), Gaps = 8/281 (2%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE----LST 272
L V++LDL+RI+AGP+CT LAD+GAEVIKVEQP +GD+ R WGPP + + +S
Sbjct: 6 LRGVKVLDLSRILAGPWCTQNLADMGAEVIKVEQPGSGDDTRGWGPPDQKSPDGQASMSA 65
Query: 273 YFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQ 332
YF NR K+S+ +DF P+G Q ++ LA + D+LVENF G L + L Y L+ +N +
Sbjct: 66 YFMACNRGKQSIELDFSQPDGAQTVRRLAAEADILVENFKAGGLAKYGLDYASLARVNPR 125
Query: 333 LIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDG----PPCKVGIASIDLATGL 388
LIY S+TG+G GP +PGYD + +GGL+ TG PDG P + G+A +DL TG+
Sbjct: 126 LIYLSITGYGQSGPMAGKPGYDYVFQGMGGLMSYTGQPDGMPGAGPLRTGVAVVDLMTGM 185
Query: 389 YAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVP 448
YA AV+AAL + +TG+G +D LL V++ N GANYL +G +R G +H N P
Sbjct: 186 YATSAVLAALRQRDRTGQGLPLDICLLDVAVALNANQGANYLVSGKAPQRTGNAHPNCAP 245
Query: 449 HQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
++VF ++G++ + G+D Q+ CKV+ A D RY T
Sbjct: 246 YEVFACADGHLILAIGNDGQFARFCKVVGHPEWAGDARYAT 286
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
CKV+ A D RY T + R+E+ L + A + W F P+ ++
Sbjct: 269 FCKVVGHPEWAGDARYATNSARLEHMPTLRPMLAAALAGAPRQAWTDAFDAAGVPWGPIH 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVL 119
++ +VFA ++ +L++ + H G++++V + ++ PP LGEH+ VL
Sbjct: 329 TLDEVFAHPQVRHRELLQTVRHPVLGEMRLVRNPLLAGAPAHALQACPPLLGEHSAAVL 387
>gi|399543369|ref|YP_006556677.1| L-carnitine dehydratase/bile acid-inducible protein F [Marinobacter
sp. BSs20148]
gi|399158701|gb|AFP29264.1| L-carnitine dehydratase/bile acid-inducible protein F [Marinobacter
sp. BSs20148]
Length = 407
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 132/284 (46%), Positives = 178/284 (62%), Gaps = 10/284 (3%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL-----NNTEL 270
PL +R+LDL+R++AGP+ T +LAD+GAEVIK+E+P +GD+ R WGPP+ T
Sbjct: 4 PLKELRVLDLSRVLAGPWTTQILADMGAEVIKIEKPDSGDDTRHWGPPWFKAADGQETRE 63
Query: 271 STYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEIN 330
S Y+ NR K S+ VD PEGQ +I++LA Q D+LVENF G L + L Y LS +N
Sbjct: 64 SAYYLAANRGKHSLTVDISQPEGQALIRELACQSDILVENFKSGGLAKKGLDYATLSALN 123
Query: 331 SQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPC----KVGIASIDLAT 386
LIYCS+TGFG GP + PGYD + + GGL+ ITG DG P +VG+A DL T
Sbjct: 124 PGLIYCSITGFGHTGPMSEMPGYDYLIQAQGGLMSITGAADGQPGAGPKRVGVAVADLTT 183
Query: 387 GLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANV 446
G+ A A++ AL H+ +TG+GQ ID LL QVS L N NY +G R G H N+
Sbjct: 184 GMNATIAILGALYHRTQTGEGQHIDIALLDVQVSWLANQAQNYFCSGKPPVRTGDYHPNL 243
Query: 447 VPHQVFKTSNG-YVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
VP+Q F TS+G + I G++ Q+Q C+ + L +A D R+ T
Sbjct: 244 VPYQPFPTSDGQQIIIAIGNNGQFQRWCETIGLGEIAQDLRFAT 287
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 73/140 (52%), Gaps = 5/140 (3%)
Query: 2 CKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNS 61
C+ + L +A D R+ T + RV++R L + T +T ++W ++ + P +
Sbjct: 271 CETIGLGEIAQDLRFATNSERVKHRIELIDILVNVTKTRTLKQWTMLLNEIGVPCGPIQD 330
Query: 62 ISQVFADEHIQ--DIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVL 119
I+QVF D +Q +++ + +H G +K V + YS T E PPALGE TD VL
Sbjct: 331 IAQVFDDPQVQARGMQITLDSAH---GPVKGVANPIKYSKTTIEYHKAPPALGEDTDAVL 387
Query: 120 KDLLNYDETTIAKLKEKKIL 139
+ +L + I LK+K ++
Sbjct: 388 ERVLQRSASEIEALKKKGVV 407
>gi|424882497|ref|ZP_18306129.1| putative acyl-CoA transferase/carnitine dehydratase [Rhizobium
leguminosarum bv. trifolii WU95]
gi|392518860|gb|EIW43592.1| putative acyl-CoA transferase/carnitine dehydratase [Rhizobium
leguminosarum bv. trifolii WU95]
Length = 400
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 118/278 (42%), Positives = 175/278 (62%), Gaps = 4/278 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE----LS 271
PL +R+++L R++AGP+ +LADLGA+VIKVE P GD+ R+WGPPF+ + +
Sbjct: 10 PLVGIRVIELARVLAGPWAGQMLADLGADVIKVENPDGGDDTRQWGPPFVEGADGENLSA 69
Query: 272 TYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINS 331
Y+ NR K+SV D K+ EGQ +++ L DV++ENF G L + L Y L ++N
Sbjct: 70 AYYHAANRGKRSVTADLKSAEGQDLVRRLVSTADVVIENFKVGGLVKYGLDYDSLRKVNP 129
Query: 332 QLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAH 391
+L+YCS+TGFG GPY GYD I + G + ITG P G P K G+A D+ TG+YA
Sbjct: 130 KLVYCSITGFGQNGPYASLAGYDYIVQGMSGFMSITGEPGGQPMKAGVAIADIFTGIYAV 189
Query: 392 GAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV 451
A+ AAL+H K G+GQ +D LL Q ++L N NYL +G R G +H N+ P++V
Sbjct: 190 SAIEAALIHALKCGEGQLVDMALLDVQSAVLANQNMNYLVSGEAPTRLGNAHPNISPYEV 249
Query: 452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
T++GY+ + G+D Q++ +C ++ L+ +A D R+ T
Sbjct: 250 VPTADGYLILAIGNDGQFRRLCTILGLETIAGDERFAT 287
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 58/122 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ L+ +A D R+ T RV NR + + I +T++ + L + + P +N
Sbjct: 270 LCTILGLETIAGDERFATNKARVGNRGEVRRLISTETLKWQKADLLKACEENAVPSGPIN 329
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I ++FAD +Q L +++ I V V S T P P LGEH +L
Sbjct: 330 TIKEMFADPQVQARGLRIDLADAAGTVIPGVRTPVVLSETPLRYIRPSPRLGEHQAEILA 389
Query: 121 DL 122
+L
Sbjct: 390 EL 391
>gi|121534539|ref|ZP_01666361.1| Formyl-CoA transferase [Thermosinus carboxydivorans Nor1]
gi|121306791|gb|EAX47711.1| Formyl-CoA transferase [Thermosinus carboxydivorans Nor1]
Length = 392
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 116/275 (42%), Positives = 179/275 (65%), Gaps = 3/275 (1%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L +R+LDLTR++AGP+CTM+LAD GA+VIK+E P GD+ R +GP F+ S YF
Sbjct: 4 LQGIRVLDLTRVLAGPYCTMMLADYGADVIKIEPPEVGDDSRAFGP-FVGKE--SAYFMS 60
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
+NRNK+S+ ++FK E + + K++ K DV+VEN+ PG +++ LGY L EIN +LIY
Sbjct: 61 LNRNKRSIALNFKRQEERDLFKEMVKHADVVVENYRPGTMEKFGLGYDQLKEINPKLIYA 120
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
+ +GFG GPY+D+P YDII ++GG++ ITG +G P +VG + D+ G++ +M
Sbjct: 121 ACSGFGHTGPYRDKPAYDIIVQAMGGIMSITGPENGDPTRVGASVGDIIAGMFTAYGIMM 180
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
AL H+ +TG+GQKID +L QV++L N A Y+ +G+ G H ++ P F +
Sbjct: 181 ALFHRERTGEGQKIDVGMLDCQVAILENAIARYVTSGVVPGPLGNRHPSITPFSSFTAKD 240
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
GY+ +G G+D+ ++ +C ++ L D R+ T A
Sbjct: 241 GYIIVGAGNDRLWERLCNILGRPDLIKDERFDTNA 275
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 71/137 (51%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C ++ L D R+ T A R N + L + EKT EWL + P A +N
Sbjct: 256 LCNILGRPDLIKDERFDTNARRTANAKELTTILNEIFKEKTIAEWLTALEEAGLPCAPIN 315
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+I ++ D HIQ +++ E+ H G +K+ G + S T V P P LG+HT +++
Sbjct: 316 TIDKIVNDPHIQAREMIVEVEHPVAGKLKMPGVPIKMSATPGSVEFPAPLLGQHTYEIIR 375
Query: 121 DLLNYDETTIAKLKEKK 137
++L +D++ I++ + K
Sbjct: 376 EVLGWDDSKISQFFDGK 392
>gi|328862890|gb|EGG11990.1| hypothetical protein MELLADRAFT_32982 [Melampsora larici-populina
98AG31]
Length = 453
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 126/288 (43%), Positives = 191/288 (66%), Gaps = 14/288 (4%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKW--------GPPFLNN 267
PL N+++LD +RI+AGPF +L D+GAEVIK+E+P GD+ R W F +
Sbjct: 48 PLKNIKVLDCSRILAGPFAAQMLGDMGAEVIKIEEPRKGDDTR-WLKTLKESNESNFKST 106
Query: 268 TELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLS 327
+ LS YF NRNKKS+ ++ K +G +I K L K DVL+ENF+ GK++ L +GY+ L
Sbjct: 107 SSLSNYFISCNRNKKSLTLNLKDQKGIEIFKRLVKDSDVLIENFMVGKMEELGIGYEVLK 166
Query: 328 EINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATG 387
IN LIY +++GFGS GP PGYD+IAA+ GL+ ITG PD P K+G+A DL TG
Sbjct: 167 TINPNLIYSNISGFGSTGPLSSLPGYDVIAAAQSGLMSITGEPDRSPMKIGVALSDLITG 226
Query: 388 LYAHGAVMAAL----LHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSH 443
+Y ++ +L +++ + G GQK++ +L + +S+L N+G++YLN+ G+RWGT H
Sbjct: 227 IYTSYGILVSLYQRDVNQNRIG-GQKVESSLFESSLSVLANIGSSYLNSNENGQRWGTQH 285
Query: 444 ANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
++VP+Q F+TS+ Y+ +GT +D+Q+Q +C V++L L +P Y T +
Sbjct: 286 PSIVPYQAFETSDAYMIVGTTNDRQFQRLCDVLDLPSLKTNPLYSTNS 333
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 76/141 (53%), Gaps = 3/141 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C V++L L +P Y T + RV NR L + I K ++T EWL F+ P++++N
Sbjct: 314 LCDVLDLPSLKTNPLYSTNSSRVTNRLKLIEIINQKLKSQSTSEWLKKFKTSGLPHSKIN 373
Query: 61 SISQVFADEHIQDIKLVKEISHE--KYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYV 118
SI + F + + +++ EI E K G IK++G + S T +++ PP LG+H +
Sbjct: 374 SIQEGFDESQSFEREMIVEIDCEMSKTGKIKLIGIPIKLSETPGQIQFAPPELGQHNQEI 433
Query: 119 LKDLLNYDETTIAKLKEKKIL 139
L L Y+ I + K+ ++
Sbjct: 434 LMK-LGYNLENIHQFKKDGVI 453
>gi|148653333|ref|YP_001280426.1| L-carnitine dehydratase/bile acid-inducible protein F
[Psychrobacter sp. PRwf-1]
gi|148572417|gb|ABQ94476.1| L-carnitine dehydratase/bile acid-inducible protein F
[Psychrobacter sp. PRwf-1]
Length = 412
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 131/278 (47%), Positives = 177/278 (63%), Gaps = 6/278 (2%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTEL----ST 272
LS +++LDL+R++AGP T +LADLGAEVIKVE+PV GDE R W PP + + +
Sbjct: 19 LSGIKVLDLSRVLAGPSSTQILADLGAEVIKVERPVVGDETRHWNPPSFTDEQTGEQTAA 78
Query: 273 YFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQ 332
YF VNRNKKS+ VD T EGQQ+IK LAK DVLVENF G L + L Y+ L +N +
Sbjct: 79 YFATVNRNKKSITVDITTAEGQQLIKALAKDSDVLVENFKVGGLKKYGLDYESLKALNHR 138
Query: 333 LIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHG 392
LIY S+TGFG GP +PGYD I + GL+ ITG G P KVG+A +DL GL
Sbjct: 139 LIYASLTGFGQTGPEAHKPGYDYIIQGLSGLMSITGPSGGEPHKVGVAVVDLFAGLQLTV 198
Query: 393 AVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVF 452
+ AALL + TG+GQ +D LL + ++ML N+G N+L +G R G +H N+ P+QV+
Sbjct: 199 GIQAALLARANTGEGQHVDVALLDSAIAMLANIGMNHLASGKTPPRLGNAHPNITPYQVY 258
Query: 453 KTS-NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
T+ + + + G+D Q+ +C V+ + L D RY T
Sbjct: 259 ATADDSHFILACGNDSQFAKVCDVIGVA-LHEDQRYST 295
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 5/139 (3%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C V+ + L D RY T RV+NRE L + + A KT E+WL + Q P ++
Sbjct: 279 VCDVIGVA-LHEDQRYSTNPARVQNRESLQQVLTAVFKTKTREQWLQLLQQAGVPCGPIH 337
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
++++ A +Q ++ +S E ++ +G + S T + PPALG T+ VL
Sbjct: 338 NVTEALAMPQVQARDMI--VSFEG-SPVRALGSPIKLSGTPVSYHSAPPALGADTEAVLH 394
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ DE I +L+ + I+
Sbjct: 395 SMGLSDE-KIQQLRAQNIV 412
>gi|33600203|ref|NP_887763.1| hypothetical protein BB1217 [Bordetella bronchiseptica RB50]
gi|33567801|emb|CAE31715.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
Length = 399
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 126/281 (44%), Positives = 179/281 (63%), Gaps = 8/281 (2%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE----LST 272
L V++LDL+RI+AGP+CT LAD+GAEVIKVEQP +GD+ R WGPP + + +S
Sbjct: 6 LRGVKVLDLSRILAGPWCTQNLADMGAEVIKVEQPGSGDDTRGWGPPDQTSPDGQASMSA 65
Query: 273 YFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQ 332
YF NR K+S+ +DF P+G Q ++ LA + D+LVENF G L + L Y L+ +N +
Sbjct: 66 YFMACNRGKQSIELDFSRPDGAQTVRRLAAEADILVENFKAGGLAKYGLDYASLARVNPR 125
Query: 333 LIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDG----PPCKVGIASIDLATGL 388
LIY S+TG+G GP +PGYD + +GGL+ TG PDG P + G+A +DL TG+
Sbjct: 126 LIYLSITGYGQSGPMAGKPGYDYVFQGMGGLMSYTGQPDGMPGAGPLRTGVAVVDLMTGM 185
Query: 389 YAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVP 448
YA AV+AAL + +TG+G +D LL V++ N GANYL +G +R G +H N P
Sbjct: 186 YATSAVLAALRQRDQTGQGLPLDICLLDVAVALNANQGANYLVSGKAPQRTGNAHPNCAP 245
Query: 449 HQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
++VF ++G++ + G+D Q+ CKV+ A D RY T
Sbjct: 246 YEVFACADGHLILAIGNDGQFARFCKVVGHPEWAGDARYAT 286
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
CKV+ A D RY T + R+E+ L + A + W F P+ ++
Sbjct: 269 FCKVVGHPEWAGDARYATNSARLEHMPTLRPMLAAALAGAPRQAWTDAFDAAGVPWGPIH 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVL 119
++ +VFA ++ +L++ + H G++++V + ++ PP LGEH+ VL
Sbjct: 329 TLDEVFAHPQVRHRELLQTVRHPVLGEMRLVRNPLLAGAPAHALQACPPLLGEHSAAVL 387
>gi|393767106|ref|ZP_10355657.1| L-carnitine dehydratase/bile acid-inducible protein F
[Methylobacterium sp. GXF4]
gi|392727369|gb|EIZ84683.1| L-carnitine dehydratase/bile acid-inducible protein F
[Methylobacterium sp. GXF4]
Length = 400
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 126/282 (44%), Positives = 178/282 (63%), Gaps = 3/282 (1%)
Query: 209 SSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNT 268
S LPL+ +R+LDL+R++AGP+C +L DLGA+VIKVE P GD+ R WG +
Sbjct: 3 SEPTSDLPLAGIRVLDLSRVLAGPWCAQVLGDLGADVIKVEHPERGDDTRDWG--VATSP 60
Query: 269 ELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSE 328
++YF VNRNK+S+ VD TPEG I+K LA++ DVLV+NF G D+L LGY LS
Sbjct: 61 GNTSYFDSVNRNKRSIGVDLATPEGLAIVKALARESDVLVQNFKTGGADKLGLGYAALSA 120
Query: 329 INSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGL 388
N +LIYCS+ G+ S G RPGYD++ G++ + G GPP K G+A++DL TG
Sbjct: 121 ENPRLIYCSIAGYSSDGSEAGRPGYDLVVQGESGVMALNGEAGGPPLKFGVAAVDLFTGQ 180
Query: 389 YAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVP 448
YA AV+AAL + +TG+G+ ID L V++ G L GI+ R+G +H ++VP
Sbjct: 181 YAAQAVLAALFQRERTGRGKTIDLALFDCGVALTSYYGLEALARGIDPPRYGNAHPSIVP 240
Query: 449 HQVFKTSNGYVTIGTGSDKQYQDMC-KVMNLQHLALDPRYLT 489
+ VF+ S+G V I G++ QY+ C +V+ L DPR+ T
Sbjct: 241 YGVFEASDGPVVITVGNNAQYRRFCEQVLERPDLCADPRFST 282
>gi|296269718|ref|YP_003652350.1| L-carnitine dehydratase/bile acid-inducible protein F
[Thermobispora bispora DSM 43833]
gi|296092505|gb|ADG88457.1| L-carnitine dehydratase/bile acid-inducible protein F
[Thermobispora bispora DSM 43833]
Length = 402
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 120/275 (43%), Positives = 179/275 (65%), Gaps = 3/275 (1%)
Query: 215 LPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYF 274
LPL V + D +R++AGP TM LADLGA VIKVE+P +GD+ R WGPP+ T S+YF
Sbjct: 5 LPLEGVLVADFSRVLAGPLATMTLADLGATVIKVERPGSGDDTRAWGPPW--TTHASSYF 62
Query: 275 TCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLI 334
CVNR+K+SV +D P+ + ++LA++ DV+VENF PG L + L Y+ + N +I
Sbjct: 63 ECVNRSKRSVVLDLADPDDRAKAQELARRADVVVENFRPGVLGKYGLDYESVRAANPGVI 122
Query: 335 YCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAV 394
YCS+TGFG +G GYD + ++GGL+HITGHPDG P KVG+A +D+ TG A +
Sbjct: 123 YCSITGFGREG-GAHLTGYDFVVQAVGGLMHITGHPDGEPTKVGVALVDVLTGKDAVIGI 181
Query: 395 MAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKT 454
+AAL H+ +TG+GQ+++ +L S+ + L+N A YL G R G H ++ P+Q +
Sbjct: 182 LAALRHRERTGEGQRVEVDLFSSCLGALVNQAAGYLATGRSPGRLGNQHPSIAPYQTLRC 241
Query: 455 SNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
++G + + G+D Q++ +++ LA DPR+ T
Sbjct: 242 ADGLLAVAVGNDAQFRVFTRILGRPELADDPRFAT 276
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 56/126 (44%), Gaps = 3/126 (2%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+++ LA DPR+ T RVE+R+ L +EA + EW + P QVN
Sbjct: 259 FTRILGRPELADDPRFATNPARVEHRDELAAALEAALAARRVAEWEADLRAAGIPCGQVN 318
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
I Q A ++ V ++ E ++ V S T P PPP LGEHTD VL
Sbjct: 319 DIGQAIAFATELGLEPVHDLGEEYLPQVRN---PVRLSATPPAAPAPPPRLGEHTDEVLA 375
Query: 121 DLLNYD 126
L D
Sbjct: 376 WLSTPD 381
>gi|410474149|ref|YP_006897430.1| hypothetical protein BN117_3651 [Bordetella parapertussis Bpp5]
gi|412339548|ref|YP_006968303.1| hypothetical protein BN112_2242 [Bordetella bronchiseptica 253]
gi|427813438|ref|ZP_18980502.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
gi|408444259|emb|CCJ50984.1| conserved hypothetical protein [Bordetella parapertussis Bpp5]
gi|408769382|emb|CCJ54159.1| conserved hypothetical protein [Bordetella bronchiseptica 253]
gi|410564438|emb|CCN21985.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
Length = 399
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 126/281 (44%), Positives = 179/281 (63%), Gaps = 8/281 (2%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE----LST 272
L V++LDL+RI+AGP+CT LAD+GAEVIKVEQP +GD+ R WGPP + + +S
Sbjct: 6 LRGVKVLDLSRILAGPWCTQNLADMGAEVIKVEQPGSGDDTRGWGPPDQTSPDGQASMSA 65
Query: 273 YFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQ 332
YF NR K+S+ +DF P+G Q ++ LA + D+LVENF G L + L Y L+ +N +
Sbjct: 66 YFMACNRGKQSIELDFSRPDGAQTVRRLAAEADILVENFKAGGLAKYGLDYASLARVNPR 125
Query: 333 LIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDG----PPCKVGIASIDLATGL 388
LIY S+TG+G GP +PGYD + +GGL+ TG PDG P + G+A +DL TG+
Sbjct: 126 LIYLSITGYGQSGPMAGKPGYDYVFQGMGGLMSYTGQPDGMPGAGPLRTGVAVVDLMTGM 185
Query: 389 YAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVP 448
YA AV+AAL + +TG+G +D LL V++ N GANYL +G +R G +H N P
Sbjct: 186 YATSAVLAALRQRDQTGQGLPLDICLLDVAVALNANQGANYLVSGKAPQRTGNAHPNCAP 245
Query: 449 HQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
++VF ++G++ + G+D Q+ CKV+ A D RY T
Sbjct: 246 YEVFACADGHLILAIGNDGQFARFCKVVGHPEWAGDARYAT 286
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
CKV+ A D RY T + R+E+ L + A + W F P+ ++
Sbjct: 269 FCKVVGHPEWAGDARYATNSARLEHMPTLRPMLAAALAGAPRQAWTDAFDAAGVPWGPIH 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVL 119
++ +VFA ++ +L++ + H G++++V + ++ PP LGEH+ VL
Sbjct: 329 TLDEVFAHPQVRHRELLQTVRHPVLGEMRLVRNPLLAGAPAHALQACPPLLGEHSAAVL 387
>gi|343925592|ref|ZP_08765110.1| putative CaiB/BaiF family protein [Gordonia alkanivorans NBRC
16433]
gi|343764552|dbj|GAA12036.1| putative CaiB/BaiF family protein [Gordonia alkanivorans NBRC
16433]
Length = 378
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 120/279 (43%), Positives = 182/279 (65%), Gaps = 5/279 (1%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTC 276
L + + D R++AGP+ TMLLADLGAEVIK+E+P GD+ R WGPP++ E S+YF
Sbjct: 7 LDGLVVADFGRVLAGPYATMLLADLGAEVIKIERPGIGDDTRSWGPPWVG--EASSYFLS 64
Query: 277 VNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYC 336
VNRNK+SV +D P G + + L + DV+VENF+PG +DRL LGY +++ ++YC
Sbjct: 65 VNRNKRSVAIDLSDPAGLEEARRLVDRADVVVENFMPGTMDRLGLGYDAVADRRPDIVYC 124
Query: 337 SVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMA 396
SVTGFG PGYD++ ++GGL+ ITG P KVG+A +D+ TGL+A +++
Sbjct: 125 SVTGFGGN---NQLPGYDLLIQAVGGLMSITGPDPQTPTKVGVAVVDVITGLHAAVGILS 181
Query: 397 ALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSN 456
AL H+ +TG+GQ+I+ NLLS+ +S L N + Y+ AG+ G H ++ P++VF+T++
Sbjct: 182 ALRHRDRTGQGQRIEVNLLSSLISALANQSSGYVAAGVVPTAMGNRHPSIAPYEVFQTAD 241
Query: 457 GYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILA 495
+ G+D+Q+ +C+V+ L D RY T + +A
Sbjct: 242 RPFVLAVGNDRQFAGLCEVLGRPDLPADERYATNSARVA 280
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 46/116 (39%), Gaps = 1/116 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+V+ L D RY T + RV NRE L + + + W P +N
Sbjct: 257 LCEVLGRPDLPADERYATNSARVANREKLAAILNEALSTASADHWFDALTARRVPCGPLN 316
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGD-IKIVGPAVAYSLTQPEVRTPPPALGEHT 115
I+ A + V EI + + V + S+T P R+ PP L EH
Sbjct: 317 DIADAIALAERLGLDPVVEIDDPRRDSPFRSVANPIRMSVTPPRYRSAPPLLDEHA 372
>gi|306843952|ref|ZP_07476547.1| acyl-CoA transferase/carnitine dehydratase [Brucella inopinata BO1]
gi|306275707|gb|EFM57431.1| acyl-CoA transferase/carnitine dehydratase [Brucella inopinata BO1]
Length = 381
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 122/287 (42%), Positives = 179/287 (62%), Gaps = 3/287 (1%)
Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN--NTELSTY 273
PL +++++L RI+AGP+ L DLGA+VIKVE P GD+ R WGPPF++ + Y
Sbjct: 5 PLDGLKVVELARILAGPWVGQTLCDLGADVIKVESP-EGDDTRTWGPPFIDVEGERSAAY 63
Query: 274 FTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQL 333
F NR K+S+ DF+T EG+++++ L + DV++ENF G LD+ L Y+ L IN QL
Sbjct: 64 FHACNRGKRSITADFRTEEGRELVRRLVAEADVVIENFKLGGLDKYGLDYESLKAINPQL 123
Query: 334 IYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGA 393
IYCS+TGFG GPY +R GYD + +GG++ +TG PD P K+G+A D+ TGLY+ A
Sbjct: 124 IYCSITGFGHTGPYAERAGYDFMIQGMGGIMDLTGEPDREPQKIGVAFADIFTGLYSVIA 183
Query: 394 VMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFK 453
+ +AL+ + +TGKGQ ID L +L N NYL +G KR G +H N+ P+Q
Sbjct: 184 IQSALIMRARTGKGQHIDMALFDCMSGVLANQAMNYLASGKSPKRMGNAHPNIAPYQTLS 243
Query: 454 TSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHL 500
S+GY I G+D Q+ + ++ + LA D R+ T + +A + L
Sbjct: 244 VSDGYFIIACGNDGQFGKLSTLLGISELAKDERFATNSARVANRAAL 290
>gi|410418967|ref|YP_006899416.1| hypothetical protein BN115_1174 [Bordetella bronchiseptica MO149]
gi|427820766|ref|ZP_18987829.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
gi|408446262|emb|CCJ57930.1| conserved hypothetical protein [Bordetella bronchiseptica MO149]
gi|410571766|emb|CCN20008.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
Length = 399
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 126/281 (44%), Positives = 179/281 (63%), Gaps = 8/281 (2%)
Query: 217 LSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTE----LST 272
L V++LDL+RI+AGP+CT LAD+GAEVIKVEQP +GD+ R WGPP + + +S
Sbjct: 6 LRGVKVLDLSRILAGPWCTQNLADMGAEVIKVEQPGSGDDTRGWGPPDQKSPDGQASMSA 65
Query: 273 YFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQ 332
YF NR K+S+ +DF P+G Q ++ LA + D+LVENF G L + L Y L+ +N +
Sbjct: 66 YFMACNRGKQSIELDFSQPDGAQTVRRLAAEADILVENFKAGGLAKYGLDYASLARVNPR 125
Query: 333 LIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDG----PPCKVGIASIDLATGL 388
LIY S+TG+G GP +PGYD + +GGL+ TG PDG P + G+A +DL TG+
Sbjct: 126 LIYLSITGYGQSGPMAGKPGYDYVFQGMGGLMSYTGQPDGMPGAGPLRTGVAVVDLMTGM 185
Query: 389 YAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVP 448
YA AV+AAL + +TG+G +D LL V++ N GANYL +G +R G +H N P
Sbjct: 186 YATSAVLAALRQRDQTGQGLPLDICLLDVAVALNANQGANYLVSGKAPQRTGNAHPNCAP 245
Query: 449 HQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
++VF ++G++ + G+D Q+ CKV+ A D RY T
Sbjct: 246 YEVFACADGHLILAIGNDGQFARFCKVVGHPEWAGDARYAT 286
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
CKV+ A D RY T + R+E+ L + A + W F P+ ++
Sbjct: 269 FCKVVGHPEWAGDARYATNSARLEHMPTLRPMLAAALAGAPRQAWTDAFDAAGVPWGPIH 328
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVL 119
++ +VFA ++ +L++ + H G++++V + ++ PP LGEH+ VL
Sbjct: 329 TLDEVFAHPQVRHRELLQTVRHPVLGEMRLVRNPLLAGAPAHALQACPPLLGEHSAAVL 387
>gi|448453543|ref|ZP_21593886.1| L-carnitine dehydratase/bile acid-inducible protein F [Halorubrum
litoreum JCM 13561]
gi|445807343|gb|EMA57428.1| L-carnitine dehydratase/bile acid-inducible protein F [Halorubrum
litoreum JCM 13561]
Length = 428
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 123/302 (40%), Positives = 182/302 (60%), Gaps = 19/302 (6%)
Query: 207 ALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL- 265
A E + PL + +LDL+R++ GPFCTM L DLGAEVIKVE+P GD+ R W PP
Sbjct: 5 AREPEGDAGPLDGLTVLDLSRVLVGPFCTMQLGDLGAEVIKVERPGPGDQTRTWVPPAFS 64
Query: 266 -----------------NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLV 308
++ S Y+ VNRNK+S+ +D T G+ +++DLA++ DVLV
Sbjct: 65 KGDGGEGRKGDGEGGESDDGAESAYYVSVNRNKRSIQLDLTTEAGRAVVRDLAREADVLV 124
Query: 309 ENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITG 368
ENF GK + LGY L+E N +L+YC+++G+G GP +D+P YDI+ + GG + TG
Sbjct: 125 ENFRVGKTEEWGLGYGDLAEENPELVYCAISGYGEWGPDRDKPAYDIMMQARGGFMSFTG 184
Query: 369 HPDGPPCKVGIASIDLATGLYAHGAVMAALLHK-YKTGKGQKIDCNLLSTQVSMLINVGA 427
GPP ++G+A D+ G+YA A++AALL + G+GQKID +LL Q + +
Sbjct: 185 VEGGPPVRIGVALADVGAGMYATQAILAALLERELGDGRGQKIDVSLLDGQAAWTSYMAT 244
Query: 428 NYLNAGIEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
NY +G R G+ H N+VP+Q F+T++GYV + SD+ + +C+ ++ L D RY
Sbjct: 245 NYFASGEPPGRMGSKHPNIVPYQAFETTDGYVVVACSSDRFWPPLCEAIDRPDLLADERY 304
Query: 488 LT 489
T
Sbjct: 305 ET 306
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 71/139 (51%), Gaps = 1/139 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+C+ ++ L D RY T RV NRE L E+ TT E + P ++V
Sbjct: 289 LCEAIDRPDLLADERYETNEGRVRNREELDSELGETFASMTTAEATAALEDHDVPASRVR 348
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
+S+VFAD I+ ++ E H G ++ G + +S T VR PPALGEHT+ VL+
Sbjct: 349 DVSEVFADPQIEARGMLAEAEHPTAGTVRFPGSPMHFSRTPTTVRRHPPALGEHTESVLR 408
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ Y + I +L+++ +
Sbjct: 409 E-YGYGDGDIDELRDRGAI 426
>gi|239820542|ref|YP_002947727.1| L-carnitine dehydratase/bile acid-inducible protein F [Variovorax
paradoxus S110]
gi|239805395|gb|ACS22461.1| L-carnitine dehydratase/bile acid-inducible protein F [Variovorax
paradoxus S110]
Length = 422
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 127/291 (43%), Positives = 183/291 (62%), Gaps = 9/291 (3%)
Query: 210 SENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFL---- 265
+ N S PLS++R+LDL+RI+A P+ +LADLGAEVIKVE+P GD+ R WGPPFL
Sbjct: 14 TSNRSGPLSHLRVLDLSRILAAPWAGQILADLGAEVIKVERPGAGDDTRSWGPPFLKDAS 73
Query: 266 -NNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYK 324
+T + Y+ VNR K+S+ V T EGQQI++D+A Q D+++EN+ G L+R L
Sbjct: 74 GQDTCEAGYYLAVNRGKRSITVSIDTSEGQQIVRDMAAQADIVLENYKAGTLERYGLDQA 133
Query: 325 HLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHIT----GHPDGPPCKVGIA 380
L +IN +LIYCSVTGFG GP +D+P YD + ++GGL+ +T G P G P KVG+
Sbjct: 134 SLRKINPRLIYCSVTGFGQTGPRRDQPAYDFLIQAMGGLMSVTGERDGRPGGGPQKVGVP 193
Query: 381 SIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWG 440
+DL TG+Y +V+AA+ + +TG G ID +L QV+ L N N+L +G +R G
Sbjct: 194 IVDLMTGMYTAVSVLAAVARRNQTGTGDTIDIGMLDVQVATLANQAMNFLVSGKTPQRNG 253
Query: 441 TSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGA 491
+H N+ P VF ++G + + G+D Q+ + V+ A D R+ T A
Sbjct: 254 NAHPNIQPQDVFACADGDMILVVGNDGQFAKLADVLGHGEWAQDERFRTNA 304
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 1/139 (0%)
Query: 1 MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVN 60
+ V+ A D R+ T A RV N L + + E + P +N
Sbjct: 285 LADVLGHGEWAQDERFRTNAQRVRNSGELSALLRQAFGARQRAEVIAALDAAGVPSGAIN 344
Query: 61 SISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLK 120
S+S+VF + +Q ++ ++ H D+ V + ++ + R PPP LGEH+ VL+
Sbjct: 345 SVSEVFDEPQVQARGMLMKLPHPAGVDVPQVASPMRFADAPIQYRRPPPLLGEHSHEVLR 404
Query: 121 DLLNYDETTIAKLKEKKIL 139
+ L YD+ IA L+ ++
Sbjct: 405 E-LGYDDERIAALRSAGVI 422
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.135 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,183,278,783
Number of Sequences: 23463169
Number of extensions: 367124923
Number of successful extensions: 4001957
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 11709
Number of HSP's successfully gapped in prelim test: 2010
Number of HSP's that attempted gapping in prelim test: 3772452
Number of HSP's gapped (non-prelim): 123089
length of query: 501
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 354
effective length of database: 8,910,109,524
effective search space: 3154178771496
effective search space used: 3154178771496
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 79 (35.0 bits)