Query psy16438
Match_columns 458
No_of_seqs 260 out of 1675
Neff 8.2
Searched_HMMs 46136
Date Fri Aug 16 21:17:06 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16438.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/16438hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 smart00119 HECTc Domain Homolo 100.0 2.3E-76 5.1E-81 588.6 29.3 310 1-432 19-335 (336)
2 cd00078 HECTc HECT domain; C-t 100.0 3.7E-76 7.9E-81 593.2 29.1 310 1-431 37-352 (352)
3 COG5021 HUL4 Ubiquitin-protein 100.0 4.8E-74 1.1E-78 614.9 25.8 308 1-432 551-871 (872)
4 KOG0942|consensus 100.0 3.4E-70 7.4E-75 565.9 21.0 313 1-432 681-1000(1001)
5 KOG0941|consensus 100.0 8E-68 1.7E-72 547.1 23.6 307 1-432 538-849 (850)
6 KOG0939|consensus 100.0 1.3E-67 2.7E-72 535.4 22.2 308 1-431 400-718 (720)
7 PF00632 HECT: HECT-domain (ub 100.0 7.2E-65 1.6E-69 505.5 19.5 301 15-432 1-316 (317)
8 KOG0170|consensus 100.0 4.2E-63 9.1E-68 485.3 22.9 337 2-429 260-616 (621)
9 KOG4427|consensus 100.0 1.8E-63 3.9E-68 504.1 20.4 311 1-432 753-1095(1096)
10 KOG0940|consensus 100.0 9.4E-42 2E-46 335.9 11.8 296 1-425 53-358 (358)
11 KOG0943|consensus 100.0 2.7E-37 5.9E-42 322.9 13.9 275 43-426 2726-3009(3015)
12 COG5021 HUL4 Ubiquitin-protein 99.2 1.3E-11 2.8E-16 134.4 5.5 95 121-229 568-662 (872)
13 KOG0941|consensus 99.1 1.1E-10 2.4E-15 123.1 6.3 99 123-242 557-655 (850)
14 KOG0939|consensus 99.1 5.8E-11 1.3E-15 122.8 2.5 126 86-229 385-511 (720)
15 cd00078 HECTc HECT domain; C-t 99.0 4.3E-10 9.2E-15 113.6 4.2 61 168-228 87-147 (352)
16 smart00119 HECTc Domain Homolo 98.9 5.9E-10 1.3E-14 111.6 4.3 59 168-226 69-127 (336)
17 PF00632 HECT: HECT-domain (ub 98.8 3.2E-09 6.9E-14 105.8 3.9 63 166-228 41-104 (317)
18 KOG0170|consensus 98.4 1.1E-07 2.5E-12 95.5 3.0 62 167-228 328-389 (621)
19 KOG4427|consensus 98.3 3.5E-07 7.5E-12 95.6 2.3 40 166-205 800-839 (1096)
20 KOG0940|consensus 97.9 4.3E-06 9.3E-11 83.5 1.1 103 121-243 70-172 (358)
21 KOG0942|consensus 97.2 0.00021 4.5E-09 77.1 2.5 63 101-163 774-840 (1001)
22 KOG0943|consensus 97.1 0.00026 5.6E-09 77.7 3.0 75 167-243 2740-2814(3015)
23 PHA02681 ORF089 virion membran 20.0 48 0.001 25.8 0.7 20 349-368 51-70 (92)
No 1
>smart00119 HECTc Domain Homologous to E6-AP Carboxyl Terminus with. E3 ubiquitin-protein ligases. Can bind to E2 enzymes.
Probab=100.00 E-value=2.3e-76 Score=588.60 Aligned_cols=310 Identities=34% Similarity=0.548 Sum_probs=274.6
Q ss_pred CCCCCCCcchHHHHHHHHHHHhcCCCCcceeeCCCCCCCCCCCcceEEECCCCCCCCCchhhHHHHHHHHHHHHHhcCcc
Q psy16438 1 ESVDDAGGGYNECLSELCEELRDNSLLKVLIPTPNSNDENGSNRDKFILNPDPFAAAGSNDKLFFFLGILLGIAIRTGHY 80 (458)
Q Consensus 1 E~~~D~GG~~RE~~~~l~~el~~~p~~~lf~~~~n~~~~~g~~~~~~~~np~~~~~~~~~~~~f~f~G~llg~al~~~~~ 80 (458)
|+|+|+|||+||||+++|+||+ +|+.+||++++|+. +++|||.+...++.|+++|+++|+++|+||+++.+
T Consensus 19 E~g~d~gG~~rEf~~~l~~el~-~~~~~lf~~~~~~~--------~~~~~p~~~~~~~~~l~~f~~~G~lig~al~~~~~ 89 (336)
T smart00119 19 EEGLDGGGVTREFFFLLSKELF-NPDYGLFRYSPNDY--------LLYPNPRAFFANPEHLAYFRFIGRVLGKALYDNRL 89 (336)
T ss_pred CCCccCCchHHHHHHHHHHHHh-CcccCCceEcCCCC--------eEEeCCCccccchHHHHHHHHHHHHHHHHHHcCCe
Confidence 8899999999999999999999 99999999999875 48999975344577899999999999999999999
Q ss_pred ccccccHHHHHHHcCCCCCccchhhhchhhHHHhhhcc-cCccccccccCCCccccccCCceEEecCCCcccccccchhh
Q psy16438 81 LNLFLAEPIWTLLSGDILSLHDLMEIDQNFITVLSNMT-QMPGEEVNALQMPFSTASSSNQFYVHLNPFENDITESNIRQ 159 (458)
Q Consensus 81 l~l~~~~~f~k~L~g~~~t~~DL~~~D~~~~~~l~~l~-~~~~~~~~~l~l~F~~~~~s~~~~~~l~p~~~~v~~~n~~~ 159 (458)
++++||+.|||.|+|.+++++||.++|+++++++++|+ +.+.
T Consensus 90 ~~l~f~~~f~k~L~~~~~tl~Dl~~~D~~~~~sl~~l~~~~~~------------------------------------- 132 (336)
T smart00119 90 LDLFFARPFYKKLLGKPVTLHDLESLDPELYKSLKWLLLNNDT------------------------------------- 132 (336)
T ss_pred eCCCCCHHHHHHHhCCCCCHHHHHHhCHHHHHHHHHHHHhCCC-------------------------------------
Confidence 99999999999999999999999999999988888773 2210
Q ss_pred hcccCcccccccchhhhhhhhhhhhcCccccccccHHHHHhhcCCCCCccchhhhhHHHHHHHHHhhcCCcccccccccc
Q psy16438 160 YVVLPTTRYSKSCAFQGILLGIAIRTGHYLNLFLAEPIWTLLSGDILSLHDLMEIDQNFITVLSNMTQMPGEEVNALQMP 239 (458)
Q Consensus 160 yi~~p~~~~~~~~~~~G~lig~ai~~~~~l~l~~~~~~~k~llg~~~~~~Dl~~~d~~~~~sl~~l~~~~~~~~~~l~l~ 239 (458)
.+.++++
T Consensus 133 -------------------------------------------------------------------------~~~~~l~ 139 (336)
T smart00119 133 -------------------------------------------------------------------------SEELDLT 139 (336)
T ss_pred -------------------------------------------------------------------------cccccce
Confidence 0123455
Q ss_pred eEeec---CCCeeEEecCCC--CCCCChhhHHHHHHHHHHhHHHH-HHHHHHHHhcccccccccccccCCCHHHHhHhhc
Q psy16438 240 FSTAS---SSNQFYVHLNPF--ENDITESNIRQYVVLVLQFRLHE-FDERIHYVRKGLYQVIPVPLLHLFSGAEIETLVC 313 (458)
Q Consensus 240 F~~~~---~~~~~~v~l~~~--~~~Vt~~N~~eyv~~~~~~~l~~-~~~~~~afr~Gf~~vip~~~l~~f~~~eL~~lic 313 (458)
|++.. .++..+++|+++ ++.||.+|+++||+++++|++.+ ++.|++|||+||++|+|.+++++|+|+||++++|
T Consensus 140 F~~~~~~~~g~~~~~eL~~~G~~~~Vt~~N~~eYv~~~~~~~l~~~~~~~~~afr~Gf~~vip~~~l~~f~~~eL~~lic 219 (336)
T smart00119 140 FSIVLTSEFGQVKVVELKPGGSNIPVTEENKKEYVHLVIEYRLNKGIEKQLEAFREGFSEVIPENLLRLFTPEELELLIC 219 (336)
T ss_pred EEEEeeecCCCcceEecCCCCCCCcCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHcCHHHhhCCCHHHHHHHhC
Confidence 54321 123345777765 78899999999999999999965 7999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHccCCCCCCCCCHHHHHHHHHHHhCCHHHHhhhceeccCCCCCCCCcccccCCceEEEEecCCCCCCC
Q psy16438 314 STPEISIDVLKQVTFYKDEMNVTTPQIIWFWEVLEEMSNQDRVLFIRFVSGRSRLAKSAREFRGLKFEIQFLDRDCDPDT 393 (458)
Q Consensus 314 G~~~i~~~~l~~~~~y~~~~~~~~~~i~~fw~vl~~~s~e~r~~fL~FvTG~~rlP~~~~g~~~l~~~i~~~~~~~~~~~ 393 (458)
|.++||+++|++++.|.++|++++++|+|||+||++||+++|++||+|+||++|+|++ |+++++++|++... +.+++
T Consensus 220 G~~~i~~~~l~~~~~~~~g~~~~~~~i~~Fw~vl~~~s~ee~~~fL~F~TG~~rlP~~--G~~~l~~~~~i~~~-~~~~~ 296 (336)
T smart00119 220 GSPEIDVDDLKSNTEYKGGYSENSQTIKWFWEVVESFTNEERRKLLQFVTGSSRLPVG--GFAALSPKFTIRKA-GSDDD 296 (336)
T ss_pred CCCCCCHHHHhhheEEcCCCCCCCHHHHHHHHHHHHCCHHHHHHhheeccCCCCCCCC--chhhcCCceEEEEC-CCCCC
Confidence 9999999999999999988899999999999999999999999999999999999987 89888777777654 33688
Q ss_pred CCceecccCCeeecCCCCCHHHHHHHHHHHHHhCccccC
Q psy16438 394 LFPESSTCFFLLRLPRYTNKDTLKHKLVEAIHLSKAINT 432 (458)
Q Consensus 394 ~LP~a~TCf~~L~LP~Yss~e~l~~kL~~AI~~~~~f~~ 432 (458)
+||+||||||+|+||.|+|+|+||+||++||++|+||+.
T Consensus 297 ~LP~a~TCfn~L~LP~Yss~e~l~~kL~~AI~~~~gF~l 335 (336)
T smart00119 297 RLPTAHTCFNRLKLPPYSSKEILREKLLLAINEGKGFGL 335 (336)
T ss_pred CCCccccccCcCcCCCCCCHHHHHHHHHHHHHcCCCCCC
Confidence 999999999999999999999999999999999999974
No 2
>cd00078 HECTc HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ubiquitin molecules to the end of growing ubiquitin chains.
Probab=100.00 E-value=3.7e-76 Score=593.16 Aligned_cols=310 Identities=35% Similarity=0.578 Sum_probs=275.9
Q ss_pred CCCCCCCcchHHHHHHHHHHHhcCCCCcceeeCCCCCCCCCCCcceEEECCCCCCCCCchhhHHHHHHHHHHHHHhcCcc
Q psy16438 1 ESVDDAGGGYNECLSELCEELRDNSLLKVLIPTPNSNDENGSNRDKFILNPDPFAAAGSNDKLFFFLGILLGIAIRTGHY 80 (458)
Q Consensus 1 E~~~D~GG~~RE~~~~l~~el~~~p~~~lf~~~~n~~~~~g~~~~~~~~np~~~~~~~~~~~~f~f~G~llg~al~~~~~ 80 (458)
|+|+|+|||+||||+++|+||+ +|..+||++++|. +.+|+|||.+ ...+.++++|+++|+++|+||+++.+
T Consensus 37 E~g~D~GG~~rE~~~~l~~el~-~~~~~lF~~~~~~-------~~~~~~~p~~-~~~~~~~~~f~~~G~lig~al~~~~~ 107 (352)
T cd00078 37 EEGIDAGGVTREFFTLVSKELF-NPSYGLFRYTPDD-------SGLLYPNPSS-FADEDHLKLFRFLGRLLGKALYEGRL 107 (352)
T ss_pred CCccCCCcchHHHHHHHHHHHc-CCCCCCeeecCCC-------CceEEeCCCc-ccchhHHHHHHHHHHHHHHHHHcCce
Confidence 8999999999999999999999 9999999999984 3459999984 33467899999999999999999999
Q ss_pred ccccccHHHHHHHcCCCCCccchhhhchhhHHHhhhcccCccccccccCCCccccccCCceEEecCCCcccccccchhhh
Q psy16438 81 LNLFLAEPIWTLLSGDILSLHDLMEIDQNFITVLSNMTQMPGEEVNALQMPFSTASSSNQFYVHLNPFENDITESNIRQY 160 (458)
Q Consensus 81 l~l~~~~~f~k~L~g~~~t~~DL~~~D~~~~~~l~~l~~~~~~~~~~l~l~F~~~~~s~~~~~~l~p~~~~v~~~n~~~y 160 (458)
++++||+.|||+|+|.+++++||.++|+++++++.+|.+++.+ .
T Consensus 108 l~l~f~~~f~k~L~g~~~t~~Dl~~iD~~~~~sl~~l~~~~~~-~----------------------------------- 151 (352)
T cd00078 108 LDLPFSRAFYKKLLGKPLSLEDLEELDPELYKSLKELLDNDGD-E----------------------------------- 151 (352)
T ss_pred eCCCCCHHHHHHHhCCCCCHHHHHHhCHHHHHHHHHHHhcCCc-h-----------------------------------
Confidence 9999999999999999999999999999888888888766521 2
Q ss_pred cccCcccccccchhhhhhhhhhhhcCccccccccHHHHHhhcCCCCCccchhhhhHHHHHHHHHhhcCCcccccccccce
Q psy16438 161 VVLPTTRYSKSCAFQGILLGIAIRTGHYLNLFLAEPIWTLLSGDILSLHDLMEIDQNFITVLSNMTQMPGEEVNALQMPF 240 (458)
Q Consensus 161 i~~p~~~~~~~~~~~G~lig~ai~~~~~l~l~~~~~~~k~llg~~~~~~Dl~~~d~~~~~sl~~l~~~~~~~~~~l~l~F 240 (458)
+.++++|
T Consensus 152 -------------------------------------------------------------------------~~l~l~F 158 (352)
T cd00078 152 -------------------------------------------------------------------------DDLELTF 158 (352)
T ss_pred -------------------------------------------------------------------------hhhccee
Confidence 2234444
Q ss_pred EeecC---CCeeEEecCCC--CCCCChhhHHHHHHHHHHhHHH-HHHHHHHHHhcccccccccccccCCCHHHHhHhhcc
Q psy16438 241 STASS---SNQFYVHLNPF--ENDITESNIRQYVVLVLQFRLH-EFDERIHYVRKGLYQVIPVPLLHLFSGAEIETLVCS 314 (458)
Q Consensus 241 ~~~~~---~~~~~v~l~~~--~~~Vt~~N~~eyv~~~~~~~l~-~~~~~~~afr~Gf~~vip~~~l~~f~~~eL~~licG 314 (458)
++... ++..+++|+|+ +++||.+|+++||+++++|+++ +++.|++|||+||++|+|..+|++|+|+||+.++||
T Consensus 159 ~~~~~~~~~~~~~veL~~~G~~~~VT~~N~~eYv~~~~~~~l~~~~~~~~~afr~Gf~~vip~~~l~~f~~~eL~~lvcG 238 (352)
T cd00078 159 TIELDSSFGGAVTVELKPGGRDIPVTNENKEEYVDLYVDYRLNKGIEEQVEAFRDGFSEVIPEELLSLFTPEELELLICG 238 (352)
T ss_pred EEEEeecCCCcceEecCCCCCCCcCCHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHcCHHhhhCCCHHHHHHHhCC
Confidence 44321 22334677654 7899999999999999999998 579999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHccCCCCCCCCCHHHHHHHHHHHhCCHHHHhhhceeccCCCCCCCCcccccCCceEEEEecCCCCCCCC
Q psy16438 315 TPEISIDVLKQVTFYKDEMNVTTPQIIWFWEVLEEMSNQDRVLFIRFVSGRSRLAKSAREFRGLKFEIQFLDRDCDPDTL 394 (458)
Q Consensus 315 ~~~i~~~~l~~~~~y~~~~~~~~~~i~~fw~vl~~~s~e~r~~fL~FvTG~~rlP~~~~g~~~l~~~i~~~~~~~~~~~~ 394 (458)
.++||+++|++++.|.++|+.++++|+|||+|+++||++||++||+||||++|+|++ ||++++++|++... +.++++
T Consensus 239 ~~~id~~~l~~~~~y~~~~~~~~~~i~~Fw~vl~~~s~eer~~fL~F~TG~~rlP~~--G~~~l~~~i~i~~~-~~~~~~ 315 (352)
T cd00078 239 SEDIDLEDLKKNTEYKGGYSSDSPTIQWFWEVLESFTNEERKKFLQFVTGSSRLPVG--GFADLNPKFTIRRV-GSPDDR 315 (352)
T ss_pred CCCCCHHHHHhceEecCCCCCCCHHHHHHHHHHHhCCHHHHHHhheeecCCCCCCCc--chhhcCCCeEEEEC-CCCCCC
Confidence 999999999999999999888999999999999999999999999999999999987 99988777776644 346889
Q ss_pred CceecccCCeeecCCCCCHHHHHHHHHHHHHhCcccc
Q psy16438 395 FPESSTCFFLLRLPRYTNKDTLKHKLVEAIHLSKAIN 431 (458)
Q Consensus 395 LP~a~TCf~~L~LP~Yss~e~l~~kL~~AI~~~~~f~ 431 (458)
||+||||||+|+||.|+|+|+||+||++||++|+||+
T Consensus 316 LP~a~TCf~~L~LP~Yss~e~l~~kL~~AI~~~~gF~ 352 (352)
T cd00078 316 LPTAHTCFNLLKLPPYSSKEILREKLLYAINEGAGFG 352 (352)
T ss_pred CCcchhhhccccCCCCCCHHHHHHHHHHHHHcCCCCC
Confidence 9999999999999999999999999999999999996
No 3
>COG5021 HUL4 Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.8e-74 Score=614.87 Aligned_cols=308 Identities=29% Similarity=0.481 Sum_probs=275.1
Q ss_pred CCCCCCCcchHHHHHHHHHHHhcCCCCcceeeCCCCCCCCCCCcceEEECCCCCCCCCchhhHHHHHHHHHHHHHhcCcc
Q psy16438 1 ESVDDAGGGYNECLSELCEELRDNSLLKVLIPTPNSNDENGSNRDKFILNPDPFAAAGSNDKLFFFLGILLGIAIRTGHY 80 (458)
Q Consensus 1 E~~~D~GG~~RE~~~~l~~el~~~p~~~lf~~~~n~~~~~g~~~~~~~~np~~~~~~~~~~~~f~f~G~llg~al~~~~~ 80 (458)
|+|+|+||++||||..++++++ +|.++||.++++... .+.|||.+ .-.|.|+++|+|+|++||+||++++.
T Consensus 551 EeGiD~GGltrE~~~lLs~~~F-np~y~LF~y~t~d~~-------~~~~n~~s-~~npe~L~yf~fiGrvIGkaIyd~~~ 621 (872)
T COG5021 551 EEGIDAGGLTREWLFLLSKEMF-NPDYGLFEYITEDLY-------TLPINPLS-SINPEHLSYFKFLGRVIGKAIYDSRI 621 (872)
T ss_pred cccccCCccchHHHHHHhHHhc-CCcccceeeeccccc-------ccCcCccc-cCCHHHHHHHHHHHHHHHHHHHhcce
Confidence 8999999999999999999999 999999999987762 24455542 33689999999999999999999999
Q ss_pred ccccccHHHHHHHcCCCCCccchhhhchhhHHHhhhcccCccccccccCCCccccccCCceEEecCCCcccccccchhhh
Q psy16438 81 LNLFLAEPIWTLLSGDILSLHDLMEIDQNFITVLSNMTQMPGEEVNALQMPFSTASSSNQFYVHLNPFENDITESNIRQY 160 (458)
Q Consensus 81 l~l~~~~~f~k~L~g~~~t~~DL~~~D~~~~~~l~~l~~~~~~~~~~l~l~F~~~~~s~~~~~~l~p~~~~v~~~n~~~y 160 (458)
++++||+.|||+|++.++++.|+.++||++|++|.||++++.++.
T Consensus 622 LD~~F~~~fyKklL~~~~sl~Dl~s~Dpe~y~sLv~ll~~~~d~~----------------------------------- 666 (872)
T COG5021 622 LDVQFSKAFYKKLLGKPVSLVDLESLDPELYRSLVWLLNNDIDET----------------------------------- 666 (872)
T ss_pred eeecchHHHHHHHhCCCCchhhhhhcCHHHHHHHHHHHcCCCCcc-----------------------------------
Confidence 999999999999999999999999999999988888887653321
Q ss_pred cccCcccccccchhhhhhhhhhhhcCccccccccHHHHHhhcCCCCCccchhhhhHHHHHHHHHhhcCCcccccccccce
Q psy16438 161 VVLPTTRYSKSCAFQGILLGIAIRTGHYLNLFLAEPIWTLLSGDILSLHDLMEIDQNFITVLSNMTQMPGEEVNALQMPF 240 (458)
Q Consensus 161 i~~p~~~~~~~~~~~G~lig~ai~~~~~l~l~~~~~~~k~llg~~~~~~Dl~~~d~~~~~sl~~l~~~~~~~~~~l~l~F 240 (458)
.++++|
T Consensus 667 --------------------------------------------------------------------------~l~l~F 672 (872)
T COG5021 667 --------------------------------------------------------------------------ILDLTF 672 (872)
T ss_pred --------------------------------------------------------------------------eeeeeE
Confidence 234455
Q ss_pred EeecC--CCeeEEecCCC--CCCCChhhHHHHHHHHHHhHHHH-HHHHHHHHhcccccccccccccCCCHHHHhHhhccC
Q psy16438 241 STASS--SNQFYVHLNPF--ENDITESNIRQYVVLVLQFRLHE-FDERIHYVRKGLYQVIPVPLLHLFSGAEIETLVCST 315 (458)
Q Consensus 241 ~~~~~--~~~~~v~l~~~--~~~Vt~~N~~eyv~~~~~~~l~~-~~~~~~afr~Gf~~vip~~~l~~f~~~eL~~licG~ 315 (458)
++... +...+|+|+|+ ++.||++||++||.++++|++.+ +++|++||..||.+|||.+++++|++.||+.||||.
T Consensus 673 sve~~~fg~~~tVeLipnG~ni~VT~~Nk~eYV~~vvdy~L~k~ie~Q~~AF~~GF~~ii~~~~i~iF~e~ELe~LI~G~ 752 (872)
T COG5021 673 TVEDDSFGESRTVELIPNGRNISVTNENKKEYVKKVVDYKLNKRVEKQFSAFKSGFSEIIPPDLLQIFDESELELLIGGI 752 (872)
T ss_pred EEeecccCceeEEEeccCCccccccchHHHHHHHHHHHHHhhhhHHHHHHHHHhhHHHhcCHHHHhhcCHHHHHHHHCCC
Confidence 55433 33455888876 88999999999999999999997 699999999999999999999999999999999999
Q ss_pred CC-CCHHHHHHHccCCCCCCCCCHHHHHHHHHHHhCCHHHHhhhceeccCCCCCCCCcccccCCce-------EEEEecC
Q psy16438 316 PE-ISIDVLKQVTFYKDEMNVTTPQIIWFWEVLEEMSNQDRVLFIRFVSGRSRLAKSAREFRGLKF-------EIQFLDR 387 (458)
Q Consensus 316 ~~-i~~~~l~~~~~y~~~~~~~~~~i~~fw~vl~~~s~e~r~~fL~FvTG~~rlP~~~~g~~~l~~-------~i~~~~~ 387 (458)
++ ||+++||++|.|.|| ++++++|+|||+++++|+.++|++|||||||++|+|++ ||+.+++ .|+ +
T Consensus 753 ~e~iDidd~K~~T~Y~GY-~~~s~~I~wFWeii~~f~~eer~klLQFvTGtsriPi~--GFk~L~~~~~~~kf~I~---~ 826 (872)
T COG5021 753 PEDIDIDDWKSNTAYHGY-TEDSPIIVWFWEIISEFDFEERAKLLQFVTGTSRIPIN--GFKDLQGSDGVRKFTIE---K 826 (872)
T ss_pred CccccHHHHhhccccccc-ccCCcHHHHHHHHHHHhCHHHHhhhheeccCCCCCCCC--ChhhcCCCcccceeeee---c
Confidence 99 999999999999997 99999999999999999999999999999999999986 8888766 443 4
Q ss_pred CCCCCCCCceecccCCeeecCCCCCHHHHHHHHHHHHHhCccccC
Q psy16438 388 DCDPDTLFPESSTCFFLLRLPRYTNKDTLKHKLVEAIHLSKAINT 432 (458)
Q Consensus 388 ~~~~~~~LP~a~TCf~~L~LP~Yss~e~l~~kL~~AI~~~~~f~~ 432 (458)
.+.++++||+||||||+|+||+|+|||+||+||.+||++|.||+.
T Consensus 827 ~g~~~~rLP~ahTCFN~L~LP~YsSke~Lr~kL~~AI~Eg~GFg~ 871 (872)
T COG5021 827 GGTDDDRLPSAHTCFNRLKLPEYSSKEKLRSKLLTAINEGAGFGL 871 (872)
T ss_pred CCCccccCCchhhhhhhccCCCCCCHHHHHHHHHHHHHhccCcCc
Confidence 566788999999999999999999999999999999999999985
No 4
>KOG0942|consensus
Probab=100.00 E-value=3.4e-70 Score=565.88 Aligned_cols=313 Identities=30% Similarity=0.481 Sum_probs=280.6
Q ss_pred CCCCCCCcchHHHHHHHHHHHhcCCCCcceeeCCCCCCCCCCCcceEEECCCC-CCCCCchhhHHHHHHHHHHHHHhcCc
Q psy16438 1 ESVDDAGGGYNECLSELCEELRDNSLLKVLIPTPNSNDENGSNRDKFILNPDP-FAAAGSNDKLFFFLGILLGIAIRTGH 79 (458)
Q Consensus 1 E~~~D~GG~~RE~~~~l~~el~~~p~~~lf~~~~n~~~~~g~~~~~~~~np~~-~~~~~~~~~~f~f~G~llg~al~~~~ 79 (458)
|.|||+||++|||++.++++.| ||++|+|..|.... ++|||.+ ......++++|+|+|+++|||||.+.
T Consensus 681 EaGIDGGGIfkEFLtel~ktaF-dpn~GlF~~T~~~l---------LYPNp~~~~l~~~~~lkhy~FLGrllGK~iYE~i 750 (1001)
T KOG0942|consen 681 EAGIDGGGIFKEFLTELLKTAF-DPNYGLFKETEDHL---------LYPNPTAAMLLDVDCLKHYYFLGRLLGKCIYEGI 750 (1001)
T ss_pred ccCccCcccHHHHHHHHHHhhc-Cccccceeecccce---------ecCCCCchhhhhhHHHHHHHHHHHHHHHHHHhcc
Confidence 7899999999999999999999 99999999998777 9999974 22333589999999999999999999
Q ss_pred cccccccHHHHHHHcCCCCCccchhhhchhhHHHhhhcccCccccccccCCCccccccCCceEEecCCCcccccccchhh
Q psy16438 80 YLNLFLAEPIWTLLSGDILSLHDLMEIDQNFITVLSNMTQMPGEEVNALQMPFSTASSSNQFYVHLNPFENDITESNIRQ 159 (458)
Q Consensus 80 ~l~l~~~~~f~k~L~g~~~t~~DL~~~D~~~~~~l~~l~~~~~~~~~~l~l~F~~~~~s~~~~~~l~p~~~~v~~~n~~~ 159 (458)
.++++|+.+|.++|+|..-
T Consensus 751 LvdvpFA~FFlaKllg~~~------------------------------------------------------------- 769 (1001)
T KOG0942|consen 751 LVDVPFAEFFLAKLLGTSN------------------------------------------------------------- 769 (1001)
T ss_pred eecccHHHHHHHHHhCCCC-------------------------------------------------------------
Confidence 9999999999999987643
Q ss_pred hcccCcccccccchhhhhhhhhhhhcCccccccccHHHHHhhcCCCCCccchhhhhHHHHHHHHHhhcCCcccccccccc
Q psy16438 160 YVVLPTTRYSKSCAFQGILLGIAIRTGHYLNLFLAEPIWTLLSGDILSLHDLMEIDQNFITVLSNMTQMPGEEVNALQMP 239 (458)
Q Consensus 160 yi~~p~~~~~~~~~~~G~lig~ai~~~~~l~l~~~~~~~k~llg~~~~~~Dl~~~d~~~~~sl~~l~~~~~~~~~~l~l~ 239 (458)
.++++||.++||++|+.|..|++|+++++++++|+
T Consensus 770 ---------------------------------------------~vd~~dL~SlDPeLY~nLifLk~y~gddi~eL~L~ 804 (1001)
T KOG0942|consen 770 ---------------------------------------------DVDLHDLASLDPELYKNLIFLKNYNGDDISELQLD 804 (1001)
T ss_pred ---------------------------------------------CCChhhhcccCHHHHHHHHHHHhcCCCchhhccce
Confidence 12456777778888888888888889899999999
Q ss_pred eEeecC--CCeeEEecCCC--CCCCChhhHHHHHHHHHHhHHHH-HHHHHHHHhcccccccccccccCCCHHHHhHhhcc
Q psy16438 240 FSTASS--SNQFYVHLNPF--ENDITESNIRQYVVLVLQFRLHE-FDERIHYVRKGLYQVIPVPLLHLFSGAEIETLVCS 314 (458)
Q Consensus 240 F~~~~~--~~~~~v~l~~~--~~~Vt~~N~~eyv~~~~~~~l~~-~~~~~~afr~Gf~~vip~~~l~~f~~~eL~~licG 314 (458)
|++..+ |....|+|+|+ +++||++|+-+||.++++|+++. ++.|+.|||+||..|||++|+.+|++.|||.||.|
T Consensus 805 FtVv~~e~G~~~vVeLkPnGs~i~VTneNvi~YihLVsnY~LN~rir~~c~AFr~Gls~II~~eWl~MF~~~ELQiLIsG 884 (1001)
T KOG0942|consen 805 FTVVNSELGERQVVELKPNGSKIRVTNENVIEYIHLVSNYKLNQRIRRQCSAFRKGLSQIISPEWLRMFNEHELQILISG 884 (1001)
T ss_pred EEEeccccccceeEEeccCCccceeechhhhhhhHHhhhhHHHHHHHHHHHHHhcchhhcCCHHHHHhhChhheeeeecC
Confidence 999865 33456788776 78999999999999999999997 69999999999999999999999999999999999
Q ss_pred CCC-CCHHHHHHHccCCCCCCCCCHHHHHHHHHHHhCCHHHHhhhceeccCCCCCCCCcccccCCceEEEEecCCCCCCC
Q psy16438 315 TPE-ISIDVLKQVTFYKDEMNVTTPQIIWFWEVLEEMSNQDRVLFIRFVSGRSRLAKSAREFRGLKFEIQFLDRDCDPDT 393 (458)
Q Consensus 315 ~~~-i~~~~l~~~~~y~~~~~~~~~~i~~fw~vl~~~s~e~r~~fL~FvTG~~rlP~~~~g~~~l~~~i~~~~~~~~~~~ 393 (458)
.++ ||++|||++|.|.|||++++++|.+||+||++|+.|+|++||+||||++|.|.- ||+.+.|...+. ..+.+++
T Consensus 885 ~~~pidldDLr~~teY~Ggy~~~hp~Iv~FWeVl~~F~~edKr~fLKFVTscsRpPll--GFK~L~P~FcI~-n~gsd~~ 961 (1001)
T KOG0942|consen 885 AEDPIDLDDLRKNTEYAGGYSPDHPTIVMFWEVLEEFSDEDKRKFLKFVTSCSRPPLL--GFKALDPAFCIR-NAGSDDD 961 (1001)
T ss_pred CcCcccHHHHHhhccccCCCCCCCCchhHHHHHHHhcchHHHHHHHHHHhcCCCcccc--cchhcCccceee-eCCCccc
Confidence 864 999999999999999999999999999999999999999999999999999974 899875554433 2245788
Q ss_pred CCceecccCCeeecCCCCCHHHHHHHHHHHHHhCccccC
Q psy16438 394 LFPESSTCFFLLRLPRYTNKDTLKHKLVEAIHLSKAINT 432 (458)
Q Consensus 394 ~LP~a~TCf~~L~LP~Yss~e~l~~kL~~AI~~~~~f~~ 432 (458)
+||||+||.|.||||+|+++++||+||+|||+-+.|||+
T Consensus 962 RLPTASTCmNLLKLP~y~~kt~LreKLlYAI~sgAGFeL 1000 (1001)
T KOG0942|consen 962 RLPTASTCMNLLKLPPYSNKTLLREKLLYAINSGAGFEL 1000 (1001)
T ss_pred cCCcHHHHHHHhcCCCcccHHHHHHHHHHHHhcccCCCC
Confidence 999999999999999999999999999999999999986
No 5
>KOG0941|consensus
Probab=100.00 E-value=8e-68 Score=547.14 Aligned_cols=307 Identities=28% Similarity=0.509 Sum_probs=269.2
Q ss_pred CCCCCCCcchHHHHHHHHHHHhcCCCCcceeeCCCCCCCCCCCcceEEECCCCCCCCCchhhHHHHHHHHHHHHHhcCcc
Q psy16438 1 ESVDDAGGGYNECLSELCEELRDNSLLKVLIPTPNSNDENGSNRDKFILNPDPFAAAGSNDKLFFFLGILLGIAIRTGHY 80 (458)
Q Consensus 1 E~~~D~GG~~RE~~~~l~~el~~~p~~~lf~~~~n~~~~~g~~~~~~~~np~~~~~~~~~~~~f~f~G~llg~al~~~~~ 80 (458)
|+|+|+||+.||||.+|.+||+ +|.+|||++.+++. +++++|.| . ...++|+++|+++|+||++...
T Consensus 538 E~g~DaGGv~kEfF~ll~~ei~-~p~~GmF~~~e~s~--------~~WF~~~~--~--~~~~~y~liGil~GLAIyN~~i 604 (850)
T KOG0941|consen 538 EEGVDAGGVRKEFFQLLVEEIF-NPEYGMFTYDEESS--------LLWFNPSP--F--EEEKQYHLIGILCGLAIYNNTI 604 (850)
T ss_pred CcccccCchHHHHHHHHHHHHc-CccccCeecccccc--------eeeecCCC--C--CccceeeehhHHHHHHHhccce
Confidence 8999999999999999999999 99999999988775 47777764 2 2234899999999999999999
Q ss_pred ccccccHHHHHHHcCCCCCccchhhhchhhHHHhhhcccCccccccccCCCccccccCCceEEecCCCcccccccchhhh
Q psy16438 81 LNLFLAEPIWTLLSGDILSLHDLMEIDQNFITVLSNMTQMPGEEVNALQMPFSTASSSNQFYVHLNPFENDITESNIRQY 160 (458)
Q Consensus 81 l~l~~~~~f~k~L~g~~~t~~DL~~~D~~~~~~l~~l~~~~~~~~~~l~l~F~~~~~s~~~~~~l~p~~~~v~~~n~~~y 160 (458)
+++|||..+||+|++.+++++||.++.|+++++|+.|.+..+++++
T Consensus 605 ldlpFPlAlykkLl~~~~sl~DL~elsP~~~~sL~~lL~y~gdd~e---------------------------------- 650 (850)
T KOG0941|consen 605 LDLPFPLALYKKLLDKPPSLEDLKELSPSLGKSLKELLDYEGDDVE---------------------------------- 650 (850)
T ss_pred ecCCCcHHHHHHHhcCCCCHHHHHhhChHhhhhHHHHHhccccchh----------------------------------
Confidence 9999999999999999999888887777666666665555443222
Q ss_pred cccCcccccccchhhhhhhhhhhhcCccccccccHHHHHhhcCCCCCccchhhhhHHHHHHHHHhhcCCcccccccccce
Q psy16438 161 VVLPTTRYSKSCAFQGILLGIAIRTGHYLNLFLAEPIWTLLSGDILSLHDLMEIDQNFITVLSNMTQMPGEEVNALQMPF 240 (458)
Q Consensus 161 i~~p~~~~~~~~~~~G~lig~ai~~~~~l~l~~~~~~~k~llg~~~~~~Dl~~~d~~~~~sl~~l~~~~~~~~~~l~l~F 240 (458)
+.++++|
T Consensus 651 -------------------------------------------------------------------------d~f~l~F 657 (850)
T KOG0941|consen 651 -------------------------------------------------------------------------DVFDLTF 657 (850)
T ss_pred -------------------------------------------------------------------------hheeeEE
Confidence 2345555
Q ss_pred EeecCCC--eeEEecCCC--CCCCChhhHHHHHHHHHHhHHHH-HHHHHHHHhcccccccccccccCCCHHHHhHhhccC
Q psy16438 241 STASSSN--QFYVHLNPF--ENDITESNIRQYVVLVLQFRLHE-FDERIHYVRKGLYQVIPVPLLHLFSGAEIETLVCST 315 (458)
Q Consensus 241 ~~~~~~~--~~~v~l~~~--~~~Vt~~N~~eyv~~~~~~~l~~-~~~~~~afr~Gf~~vip~~~l~~f~~~eL~~licG~ 315 (458)
++..+.+ ..+++|+|+ +++||++|++|||++|++|.++. +++|++||++||+.|+..+.+.+|.|+||+.++||+
T Consensus 658 ~i~~~~~g~~~~~~L~~nG~~i~vt~~Nr~efV~~Yvd~~~n~sv~~q~~aF~~GF~~v~~~~~l~lf~peEl~~li~G~ 737 (850)
T KOG0941|consen 658 QISQDDNGIPRTYELKPNGDEIPVTNENRREFVNLYVDYILNKSVKKQFEAFRRGFYKVCDENLLRLFQPEELEKLICGS 737 (850)
T ss_pred EEEehhcCccceeeccCCCcccccccccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhchhhhhhcCHHHHHHHHhCC
Confidence 5554432 224677665 78999999999999999999997 699999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHccCCCCCCCCCHHHHHHHHHHHhCCHHHHhhhceeccCCCCCCCCcccccCCceEEEEecCCCCCCCCC
Q psy16438 316 PEISIDVLKQVTFYKDEMNVTTPQIIWFWEVLEEMSNQDRVLFIRFVSGRSRLAKSAREFRGLKFEIQFLDRDCDPDTLF 395 (458)
Q Consensus 316 ~~i~~~~l~~~~~y~~~~~~~~~~i~~fw~vl~~~s~e~r~~fL~FvTG~~rlP~~~~g~~~l~~~i~~~~~~~~~~~~L 395 (458)
.++||+.|++.+.|+|||+.+|++|+|||++++.|+.++|++||+|+|||+|+|++ |+..++++|+.. ++..++|
T Consensus 738 ~~~Dw~~l~~~~~Y~ggy~~~~~~I~~FWe~~~~~~~~~kkkfL~F~TGsdRipv~--G~~~l~~~i~~~---~~~~~~l 812 (850)
T KOG0941|consen 738 EDYDWKALEETTEYDGGYTSDSPTIQWFWEIFHAFTLEEKKKFLQFLTGSDRIPVG--GLAKLKLVIQKN---GPDEDRL 812 (850)
T ss_pred CccCHHHHhhhceecCcccCCChHHHHHHHHHHhCCHHHhhhheEeecCCCccccC--ChhhceEEEecC---CCCcccC
Confidence 99999999999999999999999999999999999999999999999999999986 898888888754 4457899
Q ss_pred ceecccCCeeecCCCCCHHHHHHHHHHHHHhCccccC
Q psy16438 396 PESSTCFFLLRLPRYTNKDTLKHKLVEAIHLSKAINT 432 (458)
Q Consensus 396 P~a~TCf~~L~LP~Yss~e~l~~kL~~AI~~~~~f~~ 432 (458)
|+||||||.|.||.|||+|.|++||+.||+++.||+.
T Consensus 813 P~shTCfN~L~Lp~YsskekL~~kL~~Ai~~~~GF~l 849 (850)
T KOG0941|consen 813 PVSHTCFNVLLLPEYSSKEKLEEKLLTAINNTEGFGL 849 (850)
T ss_pred cchhhhhhhhhccccCcHHHHHHHHHHHHHhccCcCC
Confidence 9999999999999999999999999999999999974
No 6
>KOG0939|consensus
Probab=100.00 E-value=1.3e-67 Score=535.39 Aligned_cols=308 Identities=27% Similarity=0.456 Sum_probs=271.1
Q ss_pred CCCCCCCcchHHHHHHHHHHHhcCCCCcceeeCCCCCCCCCCCcceEEECCCCCCCCCchhhHHHHHHHHHHHHHhcCcc
Q psy16438 1 ESVDDAGGGYNECLSELCEELRDNSLLKVLIPTPNSNDENGSNRDKFILNPDPFAAAGSNDKLFFFLGILLGIAIRTGHY 80 (458)
Q Consensus 1 E~~~D~GG~~RE~~~~l~~el~~~p~~~lf~~~~n~~~~~g~~~~~~~~np~~~~~~~~~~~~f~f~G~llg~al~~~~~ 80 (458)
|+|+|+||++||||.++|+|++ ||.+.||...++. +.++.|||.+ ...|+||.+|+|.||++|+||+++..
T Consensus 400 EEg~D~gG~~rEw~~ll~r~if-np~~alf~~~~~d-------~tt~~pn~~s-~~np~hLs~fkf~GriigKal~d~ql 470 (720)
T KOG0939|consen 400 EEGSDAGGVTREWLQLLSREIF-NPRYALFTTVGSD-------QTTFHPNPNS-YVNPEHLSYFKFVGRIIGKALFDGQL 470 (720)
T ss_pred ccccccchHHHHHHHHHHHHHc-CCCcceEEEcCCC-------ceEEeeCCcc-cCChhhhhHHHhhHHHHHHHHhcchh
Confidence 8999999999999999999999 9999999988755 3469999984 66789999999999999999999999
Q ss_pred ccccccHHHHHHHcCCCCCccchhhhchhhHHHhhhcccCccccccccCCCccccccCCceEEecCCCcccccccchhhh
Q psy16438 81 LNLFLAEPIWTLLSGDILSLHDLMEIDQNFITVLSNMTQMPGEEVNALQMPFSTASSSNQFYVHLNPFENDITESNIRQY 160 (458)
Q Consensus 81 l~l~~~~~f~k~L~g~~~t~~DL~~~D~~~~~~l~~l~~~~~~~~~~l~l~F~~~~~s~~~~~~l~p~~~~v~~~n~~~y 160 (458)
+...|.+.|||+++|.+++.+|+++.||+||+++.||.+++-++. +.
T Consensus 471 ~~c~ftrsfyk~ilG~~v~~~d~es~DP~y~k~l~~il~ndis~~--l~------------------------------- 517 (720)
T KOG0939|consen 471 LECYFTRSFYKHILGLPVTYHDMESADPEYYKSLVWILKNDISDT--LE------------------------------- 517 (720)
T ss_pred hhheeeHHHHhhccCCceeeeehhhcChHHhhceeehhcCCcccc--ee-------------------------------
Confidence 999999999999999999999999999999999999987652211 33
Q ss_pred cccCcccccccchhhhhhhhhhhhcCccccccccHHHHHhhcCCCCCccchhhhhHHHHHHHHHhhcCCcccccccccce
Q psy16438 161 VVLPTTRYSKSCAFQGILLGIAIRTGHYLNLFLAEPIWTLLSGDILSLHDLMEIDQNFITVLSNMTQMPGEEVNALQMPF 240 (458)
Q Consensus 161 i~~p~~~~~~~~~~~G~lig~ai~~~~~l~l~~~~~~~k~llg~~~~~~Dl~~~d~~~~~sl~~l~~~~~~~~~~l~l~F 240 (458)
++|
T Consensus 518 -----------------------------------------------------------------------------ltf 520 (720)
T KOG0939|consen 518 -----------------------------------------------------------------------------LTF 520 (720)
T ss_pred -----------------------------------------------------------------------------EEE
Confidence 334
Q ss_pred EeecCC--CeeEEecCCC--CCCCChhhHHHHHHHHHHhHHHH-HHHHHHHHhcccccccccccccCCCHHHHhHhhccC
Q psy16438 241 STASSS--NQFYVHLNPF--ENDITESNIRQYVVLVLQFRLHE-FDERIHYVRKGLYQVIPVPLLHLFSGAEIETLVCST 315 (458)
Q Consensus 241 ~~~~~~--~~~~v~l~~~--~~~Vt~~N~~eyv~~~~~~~l~~-~~~~~~afr~Gf~~vip~~~l~~f~~~eL~~licG~ 315 (458)
+...+. -...++|+|+ ++.||.+||.+||++++++||.+ +++|++||.+||++++|..++++|+++||+.|+||-
T Consensus 521 s~e~~~~g~~~~~eL~p~G~~i~Vt~~nK~~yv~lv~q~rL~~~ir~ql~afl~Gl~~iip~~li~if~E~ELELLisGl 600 (720)
T KOG0939|consen 521 SEEDDEFGVESVVELKPGGAKIYVTEANKQEYVQLVTQYRLTNSIRKQLDAFLAGLHEIIPKVLLSIFDEQELELLISGL 600 (720)
T ss_pred EEeeccccccceeecccCCCceeeccccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhHHHHHHHhhhHHHHHHHcCC
Confidence 333321 1234778776 78899999999999999999987 699999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHccCCCCCCCCCHHHHHHHHHHHhCCHHHHhhhceeccCCCCCCCCcccccCCce-----EEEEecCCCC
Q psy16438 316 PEISIDVLKQVTFYKDEMNVTTPQIIWFWEVLEEMSNQDRVLFIRFVSGRSRLAKSAREFRGLKF-----EIQFLDRDCD 390 (458)
Q Consensus 316 ~~i~~~~l~~~~~y~~~~~~~~~~i~~fw~vl~~~s~e~r~~fL~FvTG~~rlP~~~~g~~~l~~-----~i~~~~~~~~ 390 (458)
++||+++|+++|.|.++ +.++++|+|||++|++|++++|.+|||||||++++|++ ||..+.. ++++... ..
T Consensus 601 peidvdd~k~nt~y~~~-~~~~~~i~wFWrav~sf~~eeraklLqFvTGtSkvP~~--GF~~l~g~ng~q~fqi~~~-~~ 676 (720)
T KOG0939|consen 601 PEIDVDDLKANTEYLGY-TKASSVIQWFWRAVRSFDQEERAKLLQFVTGTSKVPLG--GFAALEGMNGVQKFQIHAD-PG 676 (720)
T ss_pred CcccHHHHHhhhhhhcc-cccchHHHHHHHHHhhhcHHHHHhhHeeecccccCCcc--cccccccCCcceeEEEEeC-CC
Confidence 99999999999999999 78888999999999999999999999999999999986 7776522 3444322 23
Q ss_pred CCCCCceecccCCeeecCCCCCHHHHHHHHHHHHHhCc-ccc
Q psy16438 391 PDTLFPESSTCFFLLRLPRYTNKDTLKHKLVEAIHLSK-AIN 431 (458)
Q Consensus 391 ~~~~LP~a~TCf~~L~LP~Yss~e~l~~kL~~AI~~~~-~f~ 431 (458)
..++||+||||||+|.||.|.|||.++++|+.||++|. ||+
T Consensus 677 s~d~LP~ahTCfnqL~LP~Y~Sye~l~~~LllAi~E~segfg 718 (720)
T KOG0939|consen 677 STDRLPTAHTCFNQLFLPHYASYEQLRESLLLAINEGSEGFG 718 (720)
T ss_pred CCCCCcchhhhhhhhcCcchhhHHHHHHHHHHHHHhhhhccC
Confidence 56899999999999999999999999999999999965 665
No 7
>PF00632 HECT: HECT-domain (ubiquitin-transferase); InterPro: IPR000569 The name HECT comes from 'Homologous to the E6-AP Carboxyl Terminus' []. Proteins containing this domain at the C terminus include ubiquitin-protein ligase, which regulates ubiquitination of CDC25. Ubiquitin-protein ligase accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester, and then directly transfers the ubiquitin to targeted substrates. A cysteine residue is required for ubiquitin-thiolester formation. Human thyroid receptor interacting protein 12, which also contains this domain, is a component of an ATP-dependent multisubunit protein that interacts with the ligand binding domain of the thyroid hormone receptor. It could be an E3 ubiquitin-protein ligase. Human ubiquitin-protein ligase E3A interacts with the E6 protein of the cancer-associated Human papillomavirus type 16 and Human papillomavirus type 18. The E6/E6-AP complex binds to and targets the P53 tumour-suppressor protein for ubiquitin-mediated proteolysis.; GO: 0016881 acid-amino acid ligase activity, 0006464 protein modification process, 0005622 intracellular; PDB: 3TUG_A 1ZVD_A 1C4Z_C 1D5F_B 1ND7_A 2XBB_A 2XBF_A 3PT3_A 3G1N_B 3H1D_A ....
Probab=100.00 E-value=7.2e-65 Score=505.50 Aligned_cols=301 Identities=40% Similarity=0.660 Sum_probs=240.7
Q ss_pred HHHHHHHhcCCCCcceeeCCCCCCCCCCCcceEEECCCC------CCCCCchhhHHHHHHHHHHHHHhcCccccccccHH
Q psy16438 15 SELCEELRDNSLLKVLIPTPNSNDENGSNRDKFILNPDP------FAAAGSNDKLFFFLGILLGIAIRTGHYLNLFLAEP 88 (458)
Q Consensus 15 ~~l~~el~~~p~~~lf~~~~n~~~~~g~~~~~~~~np~~------~~~~~~~~~~f~f~G~llg~al~~~~~l~l~~~~~ 88 (458)
++||+||+ +|+++||..+++.. .++|||.. ...++.++++|+++|+++|+||+++.+++++|++.
T Consensus 1 ~l~~~el~-~~~~~lF~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~lig~ai~~~~~l~~~f~~~ 71 (317)
T PF00632_consen 1 TLLCKELF-DPNLGLFYQTSNNG--------LFWPNPNSNRDSPSPASSEEHLKMFRFLGRLIGKAIRNGIPLPLPFSPA 71 (317)
T ss_dssp HHHHHHHT-SGGGSSEESSTTTC--------EEEEECCH----TTGGGSTTHHHHHHHHHHHHHHHHHTTS-ESSEB-HH
T ss_pred CHHHHHhc-CccCCCceEcCCCC--------EEeCCCcccccccccccCHHHHHHHHHHHHHHHHHHHcCCccccCcCHH
Confidence 58999999 99999998777665 37788741 13445789999999999999999999999999999
Q ss_pred HHHHHc-CCCCCccchhhhchhhHHHhhhcccCccccccccCCCccccccCCceEEecCCCcccccccchhhhcccCccc
Q psy16438 89 IWTLLS-GDILSLHDLMEIDQNFITVLSNMTQMPGEEVNALQMPFSTASSSNQFYVHLNPFENDITESNIRQYVVLPTTR 167 (458)
Q Consensus 89 f~k~L~-g~~~t~~DL~~~D~~~~~~l~~l~~~~~~~~~~l~l~F~~~~~s~~~~~~l~p~~~~v~~~n~~~yi~~p~~~ 167 (458)
|||+|+ |.+++++|+.++|+++++++++|.+++.+.
T Consensus 72 ~~k~l~~g~~~t~~Dl~~iD~~~~~sl~~l~~~~~~~------------------------------------------- 108 (317)
T PF00632_consen 72 FWKYLLSGEPLTLEDLEEIDPELYKSLKKLLDMDNDE------------------------------------------- 108 (317)
T ss_dssp HHHHHT-T----HHHHHCCSHHHHHHHHHHHHSHSGS-------------------------------------------
T ss_pred HHHHHhcCCCCccccchhcCchhhcchhhheeccccc-------------------------------------------
Confidence 999999 999999999999999988888887654221
Q ss_pred ccccchhhhhhhhhhhhcCccccccccHHHHHhhcCCCCCccchhhhhHHHHHHHHHhhcCCcccccccccceEeecCC-
Q psy16438 168 YSKSCAFQGILLGIAIRTGHYLNLFLAEPIWTLLSGDILSLHDLMEIDQNFITVLSNMTQMPGEEVNALQMPFSTASSS- 246 (458)
Q Consensus 168 ~~~~~~~~G~lig~ai~~~~~l~l~~~~~~~k~llg~~~~~~Dl~~~d~~~~~sl~~l~~~~~~~~~~l~l~F~~~~~~- 246 (458)
.++++++++|+++.+.
T Consensus 109 ---------------------------------------------------------------~~~~~l~l~F~~~~~~~ 125 (317)
T PF00632_consen 109 ---------------------------------------------------------------EDVEDLDLTFSVPSSSG 125 (317)
T ss_dssp ---------------------------------------------------------------CTTSGCTEBSEEEEEEC
T ss_pred ---------------------------------------------------------------cceeecceEEEEecccc
Confidence 1133445555544321
Q ss_pred --CeeEEecCCC--CCCCChhhHHHHHHHHHHhHHHH-HHHHHHHHhcccccccccccccCCCHHHHhHhhccCCC-CCH
Q psy16438 247 --NQFYVHLNPF--ENDITESNIRQYVVLVLQFRLHE-FDERIHYVRKGLYQVIPVPLLHLFSGAEIETLVCSTPE-ISI 320 (458)
Q Consensus 247 --~~~~v~l~~~--~~~Vt~~N~~eyv~~~~~~~l~~-~~~~~~afr~Gf~~vip~~~l~~f~~~eL~~licG~~~-i~~ 320 (458)
...+++|.++ ++.||.+|+++||++++++++.+ ++.|+++||+||.+|+|...+++|+|+||+.++||.++ ||+
T Consensus 126 ~~~~~~~eL~~~G~~~~Vt~~N~~eyv~~~~~~~l~~~~~~~~~~~r~Gf~~vi~~~~l~~f~~~eL~~l~~G~~~~i~~ 205 (317)
T PF00632_consen 126 GGQVEEVELIPGGSNIPVTNENKEEYVRLLAQYRLNESVKKQLEAFRKGFYSVIPLELLSLFSPEELERLLCGSPEPIDV 205 (317)
T ss_dssp TTEEEEEESSTTGGGSB-TTTTHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHSSHHHHTTSSHHHHHHHHHCBSS---H
T ss_pred cCceeEeeecCCCcccccchhhhhHHHHhhhhhhcccccchhHHHHhcchhhcchhHHHHcCCHHHHHHHhcCccccCCH
Confidence 1234677654 78999999999999999999998 79999999999999999999999999999999999999 999
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHHHHHHhCCHHHHhhhceeccCCCCCCCCcccccCCceEEEEecCCCCCCCCCceecc
Q psy16438 321 DVLKQVTFYKDEMNVTTPQIIWFWEVLEEMSNQDRVLFIRFVSGRSRLAKSAREFRGLKFEIQFLDRDCDPDTLFPESST 400 (458)
Q Consensus 321 ~~l~~~~~y~~~~~~~~~~i~~fw~vl~~~s~e~r~~fL~FvTG~~rlP~~~~g~~~l~~~i~~~~~~~~~~~~LP~a~T 400 (458)
++|++++.|.++|+.+++.|+|||+||++||+++|++||+|+||++|+|++ ||++++++|+|......++++||+|||
T Consensus 206 ~~l~~~~~~~~g~~~~~~~i~~fw~vl~~~s~~~~~~fL~F~TG~~~lP~~--G~~~l~~~i~i~~~~~~~~~~LP~a~T 283 (317)
T PF00632_consen 206 EDLKSNTRYEGGYTESSPVIQWFWEVLEEFSQEERRKFLRFVTGSSRLPPG--GFSNLNPKITIQFSDDSPDDRLPTAHT 283 (317)
T ss_dssp HHHHHTEEEESSS-TTSHHHHHHHHHHHHS-HHHHHHHHHHHHSSSSB-TT--GGGGGE-EEEEEEESC-STTS--EEEG
T ss_pred HHHHhcccchhccccccceeeEEeeeeccCCHHHhheeEEEecCCCCCCcc--ccccccceeEEeecCCCccccCceecC
Confidence 999999999988899999999999999999999999999999999999997 898876666665443334789999999
Q ss_pred cCCeeecCCCCCHHHHHHHHHHHHHhC-ccccC
Q psy16438 401 CFFLLRLPRYTNKDTLKHKLVEAIHLS-KAINT 432 (458)
Q Consensus 401 Cf~~L~LP~Yss~e~l~~kL~~AI~~~-~~f~~ 432 (458)
|||+|+||.|+|+|+||+||++||++| .||+.
T Consensus 284 Cf~~L~LP~Yss~e~l~~kL~~Ai~~~~~gF~~ 316 (317)
T PF00632_consen 284 CFNTLKLPRYSSKEILREKLLYAIENGQEGFGL 316 (317)
T ss_dssp GGTEEEEEE-SSHHHHHHHHHHHHHHT------
T ss_pred cCCEEECCCCCCHHHHHHHHHHHHHcCCCCcCc
Confidence 999999999999999999999999999 89975
No 8
>KOG0170|consensus
Probab=100.00 E-value=4.2e-63 Score=485.32 Aligned_cols=337 Identities=22% Similarity=0.397 Sum_probs=281.0
Q ss_pred CCCCCCcchHHHHHHHHHHHhcCCCCcceeeCCCCC--------CCCCCCcceEEECCCC-CCCCC---chhhHHHHHHH
Q psy16438 2 SVDDAGGGYNECLSELCEELRDNSLLKVLIPTPNSN--------DENGSNRDKFILNPDP-FAAAG---SNDKLFFFLGI 69 (458)
Q Consensus 2 ~~~D~GG~~RE~~~~l~~el~~~p~~~lf~~~~n~~--------~~~g~~~~~~~~np~~-~~~~~---~~~~~f~f~G~ 69 (458)
|+.-+=||+-|||++|++|+| ++.+|||....-+. .+.-...-.++|.|.| .+.++ ..+++|+++|+
T Consensus 260 EvGTGLGPTLEFYtlVSk~fq-~~sLgmWR~~s~s~~~~k~~~~t~~v~~~sgLFp~P~~~ts~~se~~kvi~~F~~LG~ 338 (621)
T KOG0170|consen 260 EVGTGLGPTLEFYTLVSKEFQ-RASLGMWRCNSVSYRSGKPQENTKDVYITSGLFPRPWPPTSNSSENEKVIELFRLLGT 338 (621)
T ss_pred ccccCCCcceeeHHHHHHHHh-hccccccccCceeeccCCCCCCcchhhhccccCCCCCCCCCCchhHHHHHHHHHHHHH
Confidence 344444999999999999999 99999999642111 0111223357888865 22222 35899999999
Q ss_pred HHHHHHhcCccccccccHHHHHHHcCCCCCccchhhhchhhHHHhhhcccCccccccccCCCccccccCCceEEecCCCc
Q psy16438 70 LLGIAIRTGHYLNLFLAEPIWTLLSGDILSLHDLMEIDQNFITVLSNMTQMPGEEVNALQMPFSTASSSNQFYVHLNPFE 149 (458)
Q Consensus 70 llg~al~~~~~l~l~~~~~f~k~L~g~~~t~~DL~~~D~~~~~~l~~l~~~~~~~~~~l~l~F~~~~~s~~~~~~l~p~~ 149 (458)
+||+||+++..+++||+++|||.++|+++|.+|+..+|+++.++|..|+..... .-.+..
T Consensus 339 ~vAkal~D~Rildlpls~~Fykl~l~q~Lt~~dv~~vd~~l~~sL~~Le~vv~~-----k~~~~~--------------- 398 (621)
T KOG0170|consen 339 FVAKALQDGRILDLPLSKAFYKLILGQELTSHDVTTVDPELAKSLLELELVVPR-----KKKLEK--------------- 398 (621)
T ss_pred HHHHHHhcCceEeeeccHHHHHHHhcCCcccccceecCHHHHHHHHHHHHHhhh-----hhhhhh---------------
Confidence 999999999999999999999999999999999999999999999988654310 000000
Q ss_pred ccccccchhhhcccCcccccccchhhhhhhhhhhhcCccccccccHHHHHhhcCCCCCccchhhhhHHHHHHHHHhhcCC
Q psy16438 150 NDITESNIRQYVVLPTTRYSKSCAFQGILLGIAIRTGHYLNLFLAEPIWTLLSGDILSLHDLMEIDQNFITVLSNMTQMP 229 (458)
Q Consensus 150 ~~v~~~n~~~yi~~p~~~~~~~~~~~G~lig~ai~~~~~l~l~~~~~~~k~llg~~~~~~Dl~~~d~~~~~sl~~l~~~~ 229 (458)
| ..|....+.+ ..+.
T Consensus 399 ----------~-----------------------------------------------~~d~~~a~~d--------ltl~ 413 (621)
T KOG0170|consen 399 ----------Y-----------------------------------------------IGDVANADDD--------LTLN 413 (621)
T ss_pred ----------h-----------------------------------------------cccccccccc--------eeec
Confidence 0 0000000000 1234
Q ss_pred cccccccccceEeecCCCeeEEecCCC--CCCCChhhHHHHHHHHHHhHHHH-HHHHHHHHhcccccccccccccCCCHH
Q psy16438 230 GEEVNALQMPFSTASSSNQFYVHLNPF--ENDITESNIRQYVVLVLQFRLHE-FDERIHYVRKGLYQVIPVPLLHLFSGA 306 (458)
Q Consensus 230 ~~~~~~l~l~F~~~~~~~~~~v~l~~~--~~~Vt~~N~~eyv~~~~~~~l~~-~~~~~~afr~Gf~~vip~~~l~~f~~~ 306 (458)
+-.+++|+|+|+.++..+ ++|.|+ +++||..|++||++.++++.+.+ +++|++|||.||.+|+|.+.|++|+|+
T Consensus 414 g~~iEdL~LdFTLPG~p~---ieL~p~g~~~~V~~~NleEYi~~VId~tv~kGVqkQleAFr~GF~~VF~~~~Lqif~p~ 490 (621)
T KOG0170|consen 414 GCSIEDLSLDFTLPGFPD---IELIPGGANKPVTISNLEEYIHGVIDATVGKGVQKQLEAFRSGFSSVFPYEHLQIFTPE 490 (621)
T ss_pred CcchhhceeeEecCCCCC---eeeccCCCCCccccccHHHHHHHHHHHHHhhhHHHHHHHHHhhhhhccchhheeecCHH
Confidence 566789999999987655 788865 89999999999999999999987 799999999999999999999999999
Q ss_pred HHhHhhccC-CCCCHHHHHHHccCCCCCCCCCHHHHHHHHHHHhCCHHHHhhhceeccCCCCCCCCcccccCCceEEEEe
Q psy16438 307 EIETLVCST-PEISIDVLKQVTFYKDEMNVTTPQIIWFWEVLEEMSNQDRVLFIRFVSGRSRLAKSAREFRGLKFEIQFL 385 (458)
Q Consensus 307 eL~~licG~-~~i~~~~l~~~~~y~~~~~~~~~~i~~fw~vl~~~s~e~r~~fL~FvTG~~rlP~~~~g~~~l~~~i~~~ 385 (458)
||..|+||. ..|+++.|..|++.++||+.+++.|+.|.+++..|+.+|||.||||||||+|||+| ||++++|+++|+
T Consensus 491 EL~~llcg~~e~ws~~TL~~~i~~DHGYT~~Sp~i~~li~ils~f~~~qQR~FLQFvTGSprLPiG--GfasLNPklTIV 568 (621)
T KOG0170|consen 491 ELVTLLCGVEEDWSMATLMEHIKADHGYTMDSPIIHDLISILSAFDKEQQRLFLQFVTGSPRLPIG--GFASLNPKLTIV 568 (621)
T ss_pred HHHHHhccchhhccHHHHHHhcccccCccCCCcHHHHHHHHhhhhchHHHHHHHHHhcCCCCCCCC--cccccCCCeEEE
Confidence 999999998 46999999999999999999999999999999999999999999999999999987 999999999999
Q ss_pred cCCC----CCCCCCceecccCCeeecCCCCCHHHHHHHHHHHHHhCcc
Q psy16438 386 DRDC----DPDTLFPESSTCFFLLRLPRYTNKDTLKHKLVEAIHLSKA 429 (458)
Q Consensus 386 ~~~~----~~~~~LP~a~TCf~~L~LP~Yss~e~l~~kL~~AI~~~~~ 429 (458)
+|.. .+|+.||+++||.|+||||+|||+|+||+||.+||++++|
T Consensus 569 rKh~e~~~t~Dd~LPSVMTCaNYLKLP~YSSkEiM~~kL~~Ai~EGqg 616 (621)
T KOG0170|consen 569 RKHAEDSETPDDYLPSVMTCANYLKLPPYSSKEIMRSKLLYAIEEGQG 616 (621)
T ss_pred eccCCCCCCcccccchHHHHHhhhcCCCCchHHHHHHHHHHHHHcccc
Confidence 8743 4688999999999999999999999999999999999985
No 9
>KOG4427|consensus
Probab=100.00 E-value=1.8e-63 Score=504.11 Aligned_cols=311 Identities=27% Similarity=0.454 Sum_probs=272.1
Q ss_pred CCCCCCCcchHHHHHHHHHHHhcCCCCcceeeCCCCCCCCCCCcceEEECCCCCCCCCchhhHHHHHHHHHHHHHhcCcc
Q psy16438 1 ESVDDAGGGYNECLSELCEELRDNSLLKVLIPTPNSNDENGSNRDKFILNPDPFAAAGSNDKLFFFLGILLGIAIRTGHY 80 (458)
Q Consensus 1 E~~~D~GG~~RE~~~~l~~el~~~p~~~lf~~~~n~~~~~g~~~~~~~~np~~~~~~~~~~~~f~f~G~llg~al~~~~~ 80 (458)
|.|+|++|+++||+.++.+..| +|.++||..|+.... ++|+|.+ ....+|+++|+|+||++|+|+|.|..
T Consensus 753 EAGiDqdGvfKEFLeeiiKkvF-dp~lnLFstTs~d~~--------LyPSPts-~~~en~lqlfeFvGrmlGKAvYEGIv 822 (1096)
T KOG4427|consen 753 EAGIDQDGVFKEFLEEIIKKVF-DPELNLFSTTSTDRR--------LYPSPTS-YHHENHLQLFEFVGRMLGKAVYEGIV 822 (1096)
T ss_pred ccccCccchHHHHHHHHHHHHh-cccccccccCCCCce--------ecCCchh-hhhhchhHHHHHHHHHHHHHHhcceE
Confidence 7899999999999999999999 999999999884332 9999974 66678999999999999999999999
Q ss_pred ccccccHHHHHHHcCCCC--CccchhhhchhhHHHhhhcccCccccccccCCCccccccCCceEEecCCCcccccccchh
Q psy16438 81 LNLFLAEPIWTLLSGDIL--SLHDLMEIDQNFITVLSNMTQMPGEEVNALQMPFSTASSSNQFYVHLNPFENDITESNIR 158 (458)
Q Consensus 81 l~l~~~~~f~k~L~g~~~--t~~DL~~~D~~~~~~l~~l~~~~~~~~~~l~l~F~~~~~s~~~~~~l~p~~~~v~~~n~~ 158 (458)
++.+|++.|..+|+|..- .++.
T Consensus 823 vDv~fa~vflsqlLG~~~~s~~DE-------------------------------------------------------- 846 (1096)
T KOG4427|consen 823 VDVPFASVFLSQLLGRHSLSFIDE-------------------------------------------------------- 846 (1096)
T ss_pred EecccHHHHHHHHhcccchhhhhh--------------------------------------------------------
Confidence 999999999999998743 2233
Q ss_pred hhcccCcccccccchhhhhhhhhhhhcCccccccccHHHHHhhcCCCCCccchhhhhHHHHHHHHHhhcCCccccccccc
Q psy16438 159 QYVVLPTTRYSKSCAFQGILLGIAIRTGHYLNLFLAEPIWTLLSGDILSLHDLMEIDQNFITVLSNMTQMPGEEVNALQM 238 (458)
Q Consensus 159 ~yi~~p~~~~~~~~~~~G~lig~ai~~~~~l~l~~~~~~~k~llg~~~~~~Dl~~~d~~~~~sl~~l~~~~~~~~~~l~l 238 (458)
|..+||++|++|..++.+++ ++.+++|
T Consensus 847 ----------------------------------------------------Ls~LDpElYrnLtfvKhYdg-d~~dL~L 873 (1096)
T KOG4427|consen 847 ----------------------------------------------------LSSLDPELYRNLTFVKHYDG-DLKDLCL 873 (1096)
T ss_pred ----------------------------------------------------ccccCHHHHhhhhHHHhhcc-cHhhhee
Confidence 34556666666666666655 3677888
Q ss_pred ceEeecC--CCeeEEecCCC--CCCCChhhHHHHHHHHHHhHHHH-HHHHHHHHhcccccccccccccCCCHHHHhHhhc
Q psy16438 239 PFSTASS--SNQFYVHLNPF--ENDITESNIRQYVVLVLQFRLHE-FDERIHYVRKGLYQVIPVPLLHLFSGAEIETLVC 313 (458)
Q Consensus 239 ~F~~~~~--~~~~~v~l~~~--~~~Vt~~N~~eyv~~~~~~~l~~-~~~~~~afr~Gf~~vip~~~l~~f~~~eL~~lic 313 (458)
+|+++.+ |.-.+++|+|+ .+.||++||-+||..+++|+++. +.+|..||-+||.+++.++||++|+|.||++||+
T Consensus 874 tfSvdedfmGkis~~eL~PgGkt~sVtneNKi~YIH~MA~~rmnrqi~eqt~Af~rG~rsii~P~WlslFs~~elq~LiS 953 (1096)
T KOG4427|consen 874 TFSVDEDFMGKISTIELKPGGKTISVTNENKIQYIHAMAHFRMNRQIVEQTNAFYRGFRSIISPEWLSLFSPPELQRLIS 953 (1096)
T ss_pred eeEechhhccceeEEEeccCCcceeccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHccCcHHHHHHhc
Confidence 8888765 44456888887 67899999999999999999997 6999999999999999999999999999999999
Q ss_pred cC-CCCCHHHHHHHccCCCCCCCCCHHHHHHHHHHHh-CCHHHHhhhceeccCCCCCCCCcccccCC--ceEEEEec---
Q psy16438 314 ST-PEISIDVLKQVTFYKDEMNVTTPQIIWFWEVLEE-MSNQDRVLFIRFVSGRSRLAKSAREFRGL--KFEIQFLD--- 386 (458)
Q Consensus 314 G~-~~i~~~~l~~~~~y~~~~~~~~~~i~~fw~vl~~-~s~e~r~~fL~FvTG~~rlP~~~~g~~~l--~~~i~~~~--- 386 (458)
|. .+||++||++||.|-|||..+|++|+|||+|++. |++|||+.||+|||.|+|.|.- ||+-+ +|.|..+.
T Consensus 954 G~nsdiDl~DLkrnt~Y~GGfh~shrvIkwlWdIl~~dFt~eERklfLKFVTSCSrpPlL--GFayLePpFsIrCVeVSd 1031 (1096)
T KOG4427|consen 954 GDNSDIDLDDLKRNTKYYGGFHDSHRVIKWLWDILAGDFTPEERKLFLKFVTSCSRPPLL--GFAYLEPPFSIRCVEVSD 1031 (1096)
T ss_pred CCCCCCCHHHHHhcCEeecccCCcchhHHHHHHHHhccCChHHHHHHHHHHhhcCCCccc--cccccCCCceEEEEEecC
Confidence 97 6899999999999999999999999999999997 9999999999999999999984 66655 56676331
Q ss_pred ------------------CCCCCCCCCceecccCCeeecCCCCCHHHHHHHHHHHHHhCccccC
Q psy16438 387 ------------------RDCDPDTLFPESSTCFFLLRLPRYTNKDTLKHKLVEAIHLSKAINT 432 (458)
Q Consensus 387 ------------------~~~~~~~~LP~a~TCf~~L~LP~Yss~e~l~~kL~~AI~~~~~f~~ 432 (458)
+++.+..+||+|+||||.||||.|+-+..|||||+|||+...||++
T Consensus 1032 Dqd~gdtiGSVvRGFfaiRKg~~~~RLPTaSTCfNlLKLPnY~kkStlreKLrYAIssntGFEL 1095 (1096)
T KOG4427|consen 1032 DQDTGDTIGSVVRGFFAIRKGQPVERLPTASTCFNLLKLPNYKKKSTLREKLRYAISSNTGFEL 1095 (1096)
T ss_pred cccchhhHhHHHHhhhhhhcCCccccCCchhhHHHhhhCCCcchhHHHHHHHHHHhhcCCCccc
Confidence 2366778999999999999999999999999999999999999986
No 10
>KOG0940|consensus
Probab=100.00 E-value=9.4e-42 Score=335.95 Aligned_cols=296 Identities=28% Similarity=0.440 Sum_probs=256.0
Q ss_pred CCCCCCCcchHHHHHHHHHHHhcCCCCcceeeCCCCCCCCCCCcceEEECCCCCCCCCchhhHHHHHHHHHHHHHhcCcc
Q psy16438 1 ESVDDAGGGYNECLSELCEELRDNSLLKVLIPTPNSNDENGSNRDKFILNPDPFAAAGSNDKLFFFLGILLGIAIRTGHY 80 (458)
Q Consensus 1 E~~~D~GG~~RE~~~~l~~el~~~p~~~lf~~~~n~~~~~g~~~~~~~~np~~~~~~~~~~~~f~f~G~llg~al~~~~~ 80 (458)
|+|.|+||+.|||+..++.|.+ +|.+++|.++.++. ++..||.. ..+|.|+++|.|+|+.+|.|+.++..
T Consensus 53 ee~ldy~glprewf~~lS~e~~-~p~~~~~~~~~~~~--------tlq~~P~s-g~~p~~l~~~~~vg~~~~l~~~h~~~ 122 (358)
T KOG0940|consen 53 EEGLDYGGLPREWFFLLSHEGF-NPWYGLFQHSRKDY--------TLWLNPRS-GVNPGHLTYFRFVGGVLALAGWHMRF 122 (358)
T ss_pred ccccccCCCCcceeeeeccccC-Ccceeeeeeccccc--------ccccCCcc-CCCCCcccccccccccccccceeeEe
Confidence 7899999999999999999999 99999999988752 38999985 47899999999999999999999999
Q ss_pred ccccccHHHHHHHcCCCCCccchhhhchhhHHHhhhcccCccccccccCCCccccccCCceEEecCCCcccccccchhhh
Q psy16438 81 LNLFLAEPIWTLLSGDILSLHDLMEIDQNFITVLSNMTQMPGEEVNALQMPFSTASSSNQFYVHLNPFENDITESNIRQY 160 (458)
Q Consensus 81 l~l~~~~~f~k~L~g~~~t~~DL~~~D~~~~~~l~~l~~~~~~~~~~l~l~F~~~~~s~~~~~~l~p~~~~v~~~n~~~y 160 (458)
++.. -++|+|.|++.+++++|.+.+|+++|+++.++++++... +++|+......
T Consensus 123 ~~~g-~r~F~~~i~~ktt~ldd~e~~d~e~~~s~~~~~en~~~~----~~~f~~~~~~~--------------------- 176 (358)
T KOG0940|consen 123 TDTG-QRPFYKHILKKTTTLDDREAVDPEFYNSLTWIRENDPTN----DLTFSVESEVL--------------------- 176 (358)
T ss_pred cCCC-ceehhhhhhcCccccCchhhcCccccccccccccCCccc----chhhhcchhhc---------------------
Confidence 9888 899999999999999999999999999999998765221 44444321110
Q ss_pred cccCcccccccchhhhhhhhhhhhcCccccccccHHHHHhhcCCCCCccchhhhhHHHHHHHHHhhcCCcccccccccce
Q psy16438 161 VVLPTTRYSKSCAFQGILLGIAIRTGHYLNLFLAEPIWTLLSGDILSLHDLMEIDQNFITVLSNMTQMPGEEVNALQMPF 240 (458)
Q Consensus 161 i~~p~~~~~~~~~~~G~lig~ai~~~~~l~l~~~~~~~k~llg~~~~~~Dl~~~d~~~~~sl~~l~~~~~~~~~~l~l~F 240 (458)
T Consensus 177 -------------------------------------------------------------------------------- 176 (358)
T KOG0940|consen 177 -------------------------------------------------------------------------------- 176 (358)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EeecCCCeeEEecCCC--CCCCChhhHHHHHHHHHHhHHHH-HHHHHHHHhcccccccccccccCCCHHHHhHhhccCCC
Q psy16438 241 STASSSNQFYVHLNPF--ENDITESNIRQYVVLVLQFRLHE-FDERIHYVRKGLYQVIPVPLLHLFSGAEIETLVCSTPE 317 (458)
Q Consensus 241 ~~~~~~~~~~v~l~~~--~~~Vt~~N~~eyv~~~~~~~l~~-~~~~~~afr~Gf~~vip~~~l~~f~~~eL~~licG~~~ 317 (458)
+.....+++|+ ++.||.+|+++||.++.+ ++.. +..|.+++.+||..++|...++.|.+.+++.++||.+.
T Consensus 177 -----g~~~~~~l~p~g~~~~v~~~n~~~yi~~l~~-r~~~~~~~q~~~l~~~~~~~~p~~~~~~~~e~~~e~~~~~~~~ 250 (358)
T KOG0940|consen 177 -----GQITTQELKPNGANIQVTEENKKEYIMLLQN-RFERGIQEQLKALLQGFNELLPQSLLRIFDEMELELALSGDPE 250 (358)
T ss_pred -----CCccceeecCCCcccccccccHHHHHHHHHH-HHHHHHHHHHHHHhccccccCCcccccccchhhHHHHhcCCcc
Confidence 00112455554 889999999999999999 6554 69999999999999999999999999999999999999
Q ss_pred CCHHHHHHHccCCCCCCCCCHHHHHHHHHHHhCCHHHHhhhceeccCCCCCCCCcccccCC-------ceEEEEecCCCC
Q psy16438 318 ISIDVLKQVTFYKDEMNVTTPQIIWFWEVLEEMSNQDRVLFIRFVSGRSRLAKSAREFRGL-------KFEIQFLDRDCD 390 (458)
Q Consensus 318 i~~~~l~~~~~y~~~~~~~~~~i~~fw~vl~~~s~e~r~~fL~FvTG~~rlP~~~~g~~~l-------~~~i~~~~~~~~ 390 (458)
+++++|++++.|.++ ..++++|.|||+.+..+++++|.+.++|+||++++|.. |+..+ +++|.- ..
T Consensus 251 ~~~~d~~~~t~~~~~-~~~~~~i~wf~~~v~~~~~~~r~r~l~~~tg~~~vp~~--~~~~l~~s~~~~~~~ie~----~~ 323 (358)
T KOG0940|consen 251 IDVNDWKQNTEYRGY-SETDRQIDWFWNNVDEMDNEERIRLLQFVTGTSRVPVE--GFAILSGSNGPRKFCIEK----WG 323 (358)
T ss_pred cchhHHhhhcccccc-cCCccccHHHHHhhhhcChHHHHhhhhccCCCcccccc--chhhccCCCccCceeecC----cc
Confidence 999999999999976 89999999999999999999999999999999999985 44332 345532 33
Q ss_pred CCCCCceecccCCeeecCCCCCHHHHHHHHHHHHH
Q psy16438 391 PDTLFPESSTCFFLLRLPRYTNKDTLKHKLVEAIH 425 (458)
Q Consensus 391 ~~~~LP~a~TCf~~L~LP~Yss~e~l~~kL~~AI~ 425 (458)
..+++|.+|||||+|.+|.|.|++.|++||..||+
T Consensus 324 ~~~~~p~~htcfnrld~~~~~s~~~L~~kl~~ai~ 358 (358)
T KOG0940|consen 324 KSTQLPRSHTCFNRLDLPPYESYEPLREKLLLAIE 358 (358)
T ss_pred cccccchhcccccccccccccchhHHHHHHHHhcC
Confidence 56789999999999999999999999999999984
No 11
>KOG0943|consensus
Probab=100.00 E-value=2.7e-37 Score=322.87 Aligned_cols=275 Identities=23% Similarity=0.374 Sum_probs=225.4
Q ss_pred CcceEEECCCCCCCCCchhhHHHHHHHHHHHHHhcCccccccccHHHHHHHcCCCCCccchhhhchhhHHHhhhcccCcc
Q psy16438 43 NRDKFILNPDPFAAAGSNDKLFFFLGILLGIAIRTGHYLNLFLAEPIWTLLSGDILSLHDLMEIDQNFITVLSNMTQMPG 122 (458)
Q Consensus 43 ~~~~~~~np~~~~~~~~~~~~f~f~G~llg~al~~~~~l~l~~~~~f~k~L~g~~~t~~DL~~~D~~~~~~l~~l~~~~~ 122 (458)
.++.|+|.|. ...+.++..|+-+||++|+|+..|...|+.|.+.++|+|+|.++.|+|+..+||-++++|+.|.....
T Consensus 2726 ~geFYtPkiG--kga~~RLaafRniGRIlGiCL~Qgdi~PirfnRHifk~iL~l~icW~Df~FfDPVlfenLRaLfkAhp 2803 (3015)
T KOG0943|consen 2726 KGEFYTPKIG--KGAEARLAAFRNIGRILGICLLQGDICPIRFNRHIFKVILGLKICWHDFAFFDPVLFENLRALFKAHP 2803 (3015)
T ss_pred CCCccCCCCC--CCcHHHHHHHHhhhhHhhhhhhcCcccceeehhHHHHHHhcCceehhhhccccHHHHHHHHHHHhcCC
Confidence 3556998887 67788999999999999999999999999999999999999999999999999999999998854321
Q ss_pred ccccccCCCccccccCCceEEecCCCcccccccchhhhcccCcccccccchhhhhhhhhhhhcCccccccccHHHHHhhc
Q psy16438 123 EEVNALQMPFSTASSSNQFYVHLNPFENDITESNIRQYVVLPTTRYSKSCAFQGILLGIAIRTGHYLNLFLAEPIWTLLS 202 (458)
Q Consensus 123 ~~~~~l~l~F~~~~~s~~~~~~l~p~~~~v~~~n~~~yi~~p~~~~~~~~~~~G~lig~ai~~~~~l~l~~~~~~~k~ll 202 (458)
. ......|+.
T Consensus 2804 s--Sd~DadFS~-------------------------------------------------------------------- 2813 (3015)
T KOG0943|consen 2804 S--SDADADFSA-------------------------------------------------------------------- 2813 (3015)
T ss_pred c--ccccchhhH--------------------------------------------------------------------
Confidence 0 001111110
Q ss_pred CCCCCccchhhhhHHHHHHHHHhhcCCcccccccccceEe--ecCCCeeEEecCCC--CCCCChhhHHHHHHHHHHhHHH
Q psy16438 203 GDILSLHDLMEIDQNFITVLSNMTQMPGEEVNALQMPFST--ASSSNQFYVHLNPF--ENDITESNIRQYVVLVLQFRLH 278 (458)
Q Consensus 203 g~~~~~~Dl~~~d~~~~~sl~~l~~~~~~~~~~l~l~F~~--~~~~~~~~v~l~~~--~~~Vt~~N~~eyv~~~~~~~l~ 278 (458)
+++.|.. ....+..+|+|+|+ ++.||.+|+-|||..|+++++.
T Consensus 2814 ---------------------------------md~aa~gdlckee~a~qVeL~PNGdeilVnkdNViEYV~KYAE~~ll 2860 (3015)
T KOG0943|consen 2814 ---------------------------------MDLAAAGDLCKEEGAGQVELIPNGDEILVNKDNVIEYVRKYAEHRLL 2860 (3015)
T ss_pred ---------------------------------HHHhhccchhhhcCceeEEEecCCceeeecchhHHHHHHHHHHhhhh
Confidence 0011111 00112223666664 8899999999999999999997
Q ss_pred H-HHHHHHHHhcccccccccccccCCCHHHHhHhhccCCCCCHHHHHHHccCCCCCCCCCH----HHHHHHHHHHhCCHH
Q psy16438 279 E-FDERIHYVRKGLYQVIPVPLLHLFSGAEIETLVCSTPEISIDVLKQVTFYKDEMNVTTP----QIIWFWEVLEEMSNQ 353 (458)
Q Consensus 279 ~-~~~~~~afr~Gf~~vip~~~l~~f~~~eL~~licG~~~i~~~~l~~~~~y~~~~~~~~~----~i~~fw~vl~~~s~e 353 (458)
. ....++|+|+|+..|+|...|.-++++++.++|||..+++++.|..+|-|.+...++.. .-+|||+|++.||..
T Consensus 2861 gk~~i~feAiReGiLDViPenmL~~LT~EDfRLiicG~eeVniqmL~e~TgFlDES~anaEkL~qFKqWFWqiiEkfs~q 2940 (3015)
T KOG0943|consen 2861 GKAEIPFEAIREGILDVIPENMLEDLTAEDFRLIICGCEEVNIQMLIEFTGFLDESGANAEKLLQFKQWFWQIIEKFSMQ 2940 (3015)
T ss_pred eeeeccHHHHHHhHHhhcchhhhcccCHhHheeeeecccceehhHhhhhccccccccccHHHHHHHHHHHHHHHHHHhhh
Confidence 6 47789999999999999999999999999999999999999999999988766333433 458999999999999
Q ss_pred HHhhhceeccCCCCCCCCcccccCCceEEEEecCCCCCCCCCceecccCCeeecCCCCCHHHHHHHHHHHHHh
Q psy16438 354 DRVLFIRFVSGRSRLAKSAREFRGLKFEIQFLDRDCDPDTLFPESSTCFFLLRLPRYTNKDTLKHKLVEAIHL 426 (458)
Q Consensus 354 ~r~~fL~FvTG~~rlP~~~~g~~~l~~~i~~~~~~~~~~~~LP~a~TCf~~L~LP~Yss~e~l~~kL~~AI~~ 426 (458)
+|+.+..|||||+.||....||.. ...|.+- .+.|..||+|+||..+|..|-||||++||+||+.||.-
T Consensus 2941 EkQdLVfFWTgSPaLPAa~e~~p~-~aSimiR---P~dD~fLPTANTCISRLYVPlYSSKqiLkqKLLLAIKa 3009 (3015)
T KOG0943|consen 2941 EKQDLVFFWTGSPALPAAEEGFPP-MASIMIR---PPDDQFLPTANTCISRLYVPLYSSKQILKQKLLLAIKA 3009 (3015)
T ss_pred hhccEEEEecCCCCCCccccCCCC-CCceeec---CcccccCCcccchhhheeeechhhHHHHHHHHHHhhhc
Confidence 999999999999999997668866 3455442 34578999999999999999999999999999999985
No 12
>COG5021 HUL4 Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones]
Probab=99.20 E-value=1.3e-11 Score=134.39 Aligned_cols=95 Identities=21% Similarity=0.290 Sum_probs=78.7
Q ss_pred ccccccccCCCccccccCCceEEecCCCcccccccchhhhcccCcccccccchhhhhhhhhhhhcCccccccccHHHHHh
Q psy16438 121 PGEEVNALQMPFSTASSSNQFYVHLNPFENDITESNIRQYVVLPTTRYSKSCAFQGILLGIAIRTGHYLNLFLAEPIWTL 200 (458)
Q Consensus 121 ~~~~~~~l~l~F~~~~~s~~~~~~l~p~~~~v~~~n~~~yi~~p~~~~~~~~~~~G~lig~ai~~~~~l~l~~~~~~~k~ 200 (458)
+.+.|++.+..|..... +.+.+.++|.+. | ++.++.+|+|+|++||+||++++.+|++|+.+|||+
T Consensus 568 s~~~Fnp~y~LF~y~t~-d~~~~~~n~~s~-~------------npe~L~yf~fiGrvIGkaIyd~~~LD~~F~~~fyKk 633 (872)
T COG5021 568 SKEMFNPDYGLFEYITE-DLYTLPINPLSS-I------------NPEHLSYFKFLGRVIGKAIYDSRILDVQFSKAFYKK 633 (872)
T ss_pred hHHhcCCcccceeeecc-cccccCcCcccc-C------------CHHHHHHHHHHHHHHHHHHHhcceeeecchHHHHHH
Confidence 45677888888865433 334455665544 2 235778999999999999999999999999999999
Q ss_pred hcCCCCCccchhhhhHHHHHHHHHhhcCC
Q psy16438 201 LSGDILSLHDLMEIDQNFITVLSNMTQMP 229 (458)
Q Consensus 201 llg~~~~~~Dl~~~d~~~~~sl~~l~~~~ 229 (458)
|++++++++|++++||++|++|.+|++++
T Consensus 634 lL~~~~sl~Dl~s~Dpe~y~sLv~ll~~~ 662 (872)
T COG5021 634 LLGKPVSLVDLESLDPELYRSLVWLLNND 662 (872)
T ss_pred HhCCCCchhhhhhcCHHHHHHHHHHHcCC
Confidence 99999999999999999999999999865
No 13
>KOG0941|consensus
Probab=99.09 E-value=1.1e-10 Score=123.14 Aligned_cols=99 Identities=25% Similarity=0.363 Sum_probs=86.6
Q ss_pred ccccccCCCccccccCCceEEecCCCcccccccchhhhcccCcccccccchhhhhhhhhhhhcCccccccccHHHHHhhc
Q psy16438 123 EEVNALQMPFSTASSSNQFYVHLNPFENDITESNIRQYVVLPTTRYSKSCAFQGILLGIAIRTGHYLNLFLAEPIWTLLS 202 (458)
Q Consensus 123 ~~~~~l~l~F~~~~~s~~~~~~l~p~~~~v~~~n~~~yi~~p~~~~~~~~~~~G~lig~ai~~~~~l~l~~~~~~~k~ll 202 (458)
+.+++.+..|+.++.+.-.|+.+.|+... ++|.++|+++|+||+|...+++|||.++||+|+
T Consensus 557 ei~~p~~GmF~~~e~s~~~WF~~~~~~~~------------------~~y~liGil~GLAIyN~~ildlpFPlAlykkLl 618 (850)
T KOG0941|consen 557 EIFNPEYGMFTYDEESSLLWFNPSPFEEE------------------KQYHLIGILCGLAIYNNTILDLPFPLALYKKLL 618 (850)
T ss_pred HHcCccccCeecccccceeeecCCCCCcc------------------ceeeehhHHHHHHHhccceecCCCcHHHHHHHh
Confidence 56788899999998887779999888664 478999999999999999999999999999999
Q ss_pred CCCCCccchhhhhHHHHHHHHHhhcCCcccccccccceEe
Q psy16438 203 GDILSLHDLMEIDQNFITVLSNMTQMPGEEVNALQMPFST 242 (458)
Q Consensus 203 g~~~~~~Dl~~~d~~~~~sl~~l~~~~~~~~~~l~l~F~~ 242 (458)
+.+++++||.++-|.++++|+.|+++.++ +.+-+|..
T Consensus 619 ~~~~sl~DL~elsP~~~~sL~~lL~y~gd---d~ed~f~l 655 (850)
T KOG0941|consen 619 DKPPSLEDLKELSPSLGKSLKELLDYEGD---DVEDVFDL 655 (850)
T ss_pred cCCCCHHHHHhhChHhhhhHHHHHhcccc---chhhheee
Confidence 99999999999999999999999987652 44444443
No 14
>KOG0939|consensus
Probab=99.05 E-value=5.8e-11 Score=122.82 Aligned_cols=126 Identities=17% Similarity=0.192 Sum_probs=97.9
Q ss_pred cHHHHHHHcCCCCCccchhhhchh-hHHHhhhcccCccccccccCCCccccccCCceEEecCCCcccccccchhhhcccC
Q psy16438 86 AEPIWTLLSGDILSLHDLMEIDQN-FITVLSNMTQMPGEEVNALQMPFSTASSSNQFYVHLNPFENDITESNIRQYVVLP 164 (458)
Q Consensus 86 ~~~f~k~L~g~~~t~~DL~~~D~~-~~~~l~~l~~~~~~~~~~l~l~F~~~~~s~~~~~~l~p~~~~v~~~n~~~yi~~p 164 (458)
++.=||. +..|++.+-+.+|.+ +.+ +|+.-.+.+.|++.+..|+...+. +..+.|||.+..
T Consensus 385 s~~e~~~--rl~I~f~gEEg~D~gG~~r--Ew~~ll~r~ifnp~~alf~~~~~d-~tt~~pn~~s~~------------- 446 (720)
T KOG0939|consen 385 SPEELKT--RLEVTFQGEEGSDAGGVTR--EWLQLLSREIFNPRYALFTTVGSD-QTTFHPNPNSYV------------- 446 (720)
T ss_pred CHHHHhc--ceEEEEecccccccchHHH--HHHHHHHHHHcCCCcceEEEcCCC-ceEEeeCCcccC-------------
Confidence 3334444 445566677777765 433 333334567788888999865544 556777776442
Q ss_pred cccccccchhhhhhhhhhhhcCccccccccHHHHHhhcCCCCCccchhhhhHHHHHHHHHhhcCC
Q psy16438 165 TTRYSKSCAFQGILLGIAIRTGHYLNLFLAEPIWTLLSGDILSLHDLMEIDQNFITVLSNMTQMP 229 (458)
Q Consensus 165 ~~~~~~~~~~~G~lig~ai~~~~~l~l~~~~~~~k~llg~~~~~~Dl~~~d~~~~~sl~~l~~~~ 229 (458)
+..|+++|+|+||++||||++++.++..|++.|||.++|.+++++|+++.||++|+++.+|++.+
T Consensus 447 np~hLs~fkf~GriigKal~d~ql~~c~ftrsfyk~ilG~~v~~~d~es~DP~y~k~l~~il~nd 511 (720)
T KOG0939|consen 447 NPEHLSYFKFVGRIIGKALFDGQLLECYFTRSFYKHILGLPVTYHDMESADPEYYKSLVWILKND 511 (720)
T ss_pred ChhhhhHHHhhHHHHHHHHhcchhhhheeeHHHHhhccCCceeeeehhhcChHHhhceeehhcCC
Confidence 34588999999999999999999999999999999999999999999999999999999998764
No 15
>cd00078 HECTc HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ubiquitin molecules to the end of growing ubiquitin chains.
Probab=98.95 E-value=4.3e-10 Score=113.62 Aligned_cols=61 Identities=33% Similarity=0.451 Sum_probs=58.6
Q ss_pred ccccchhhhhhhhhhhhcCccccccccHHHHHhhcCCCCCccchhhhhHHHHHHHHHhhcC
Q psy16438 168 YSKSCAFQGILLGIAIRTGHYLNLFLAEPIWTLLSGDILSLHDLMEIDQNFITVLSNMTQM 228 (458)
Q Consensus 168 ~~~~~~~~G~lig~ai~~~~~l~l~~~~~~~k~llg~~~~~~Dl~~~d~~~~~sl~~l~~~ 228 (458)
+.++|+++|+++|+||+++.+++++|+++|||+|+|.+++++||+++||+++++|++|+++
T Consensus 87 ~~~~f~~~G~lig~al~~~~~l~l~f~~~f~k~L~g~~~t~~Dl~~iD~~~~~sl~~l~~~ 147 (352)
T cd00078 87 HLKLFRFLGRLLGKALYEGRLLDLPFSRAFYKKLLGKPLSLEDLEELDPELYKSLKELLDN 147 (352)
T ss_pred HHHHHHHHHHHHHHHHHcCceeCCCCCHHHHHHHhCCCCCHHHHHHhCHHHHHHHHHHHhc
Confidence 4688999999999999999999999999999999999999999999999999999999875
No 16
>smart00119 HECTc Domain Homologous to E6-AP Carboxyl Terminus with. E3 ubiquitin-protein ligases. Can bind to E2 enzymes.
Probab=98.94 E-value=5.9e-10 Score=111.62 Aligned_cols=59 Identities=31% Similarity=0.486 Sum_probs=56.6
Q ss_pred ccccchhhhhhhhhhhhcCccccccccHHHHHhhcCCCCCccchhhhhHHHHHHHHHhh
Q psy16438 168 YSKSCAFQGILLGIAIRTGHYLNLFLAEPIWTLLSGDILSLHDLMEIDQNFITVLSNMT 226 (458)
Q Consensus 168 ~~~~~~~~G~lig~ai~~~~~l~l~~~~~~~k~llg~~~~~~Dl~~~d~~~~~sl~~l~ 226 (458)
+.+.|+++|++||+||+++.+++++|+++|||.|+|.+++++||+++||+++++|++|+
T Consensus 69 ~l~~f~~~G~lig~al~~~~~~~l~f~~~f~k~L~~~~~tl~Dl~~~D~~~~~sl~~l~ 127 (336)
T smart00119 69 HLAYFRFIGRVLGKALYDNRLLDLFFARPFYKKLLGKPVTLHDLESLDPELYKSLKWLL 127 (336)
T ss_pred HHHHHHHHHHHHHHHHHcCCeeCCCCCHHHHHHHhCCCCCHHHHHHhCHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999999999999999985
No 17
>PF00632 HECT: HECT-domain (ubiquitin-transferase); InterPro: IPR000569 The name HECT comes from 'Homologous to the E6-AP Carboxyl Terminus' []. Proteins containing this domain at the C terminus include ubiquitin-protein ligase, which regulates ubiquitination of CDC25. Ubiquitin-protein ligase accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester, and then directly transfers the ubiquitin to targeted substrates. A cysteine residue is required for ubiquitin-thiolester formation. Human thyroid receptor interacting protein 12, which also contains this domain, is a component of an ATP-dependent multisubunit protein that interacts with the ligand binding domain of the thyroid hormone receptor. It could be an E3 ubiquitin-protein ligase. Human ubiquitin-protein ligase E3A interacts with the E6 protein of the cancer-associated Human papillomavirus type 16 and Human papillomavirus type 18. The E6/E6-AP complex binds to and targets the P53 tumour-suppressor protein for ubiquitin-mediated proteolysis.; GO: 0016881 acid-amino acid ligase activity, 0006464 protein modification process, 0005622 intracellular; PDB: 3TUG_A 1ZVD_A 1C4Z_C 1D5F_B 1ND7_A 2XBB_A 2XBF_A 3PT3_A 3G1N_B 3H1D_A ....
Probab=98.79 E-value=3.2e-09 Score=105.79 Aligned_cols=63 Identities=37% Similarity=0.540 Sum_probs=53.4
Q ss_pred ccccccchhhhhhhhhhhhcCccccccccHHHHHhhc-CCCCCccchhhhhHHHHHHHHHhhcC
Q psy16438 166 TRYSKSCAFQGILLGIAIRTGHYLNLFLAEPIWTLLS-GDILSLHDLMEIDQNFITVLSNMTQM 228 (458)
Q Consensus 166 ~~~~~~~~~~G~lig~ai~~~~~l~l~~~~~~~k~ll-g~~~~~~Dl~~~d~~~~~sl~~l~~~ 228 (458)
+.+.++|+++|++||+||+++.+++++|+++|||+|+ |.+++++|++++||+++++|++|+++
T Consensus 41 ~~~~~~~~~lG~lig~ai~~~~~l~~~f~~~~~k~l~~g~~~t~~Dl~~iD~~~~~sl~~l~~~ 104 (317)
T PF00632_consen 41 EEHLKMFRFLGRLIGKAIRNGIPLPLPFSPAFWKYLLSGEPLTLEDLEEIDPELYKSLKKLLDM 104 (317)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTS-ESSEB-HHHHHHHT-T----HHHHHCCSHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHcCCccccCcCHHHHHHHhcCCCCccccchhcCchhhcchhhheec
Confidence 3466889999999999999999999999999999999 99999999999999999999999864
No 18
>KOG0170|consensus
Probab=98.43 E-value=1.1e-07 Score=95.45 Aligned_cols=62 Identities=21% Similarity=0.412 Sum_probs=58.1
Q ss_pred cccccchhhhhhhhhhhhcCccccccccHHHHHhhcCCCCCccchhhhhHHHHHHHHHhhcC
Q psy16438 167 RYSKSCAFQGILLGIAIRTGHYLNLFLAEPIWTLLSGDILSLHDLMEIDQNFITVLSNMTQM 228 (458)
Q Consensus 167 ~~~~~~~~~G~lig~ai~~~~~l~l~~~~~~~k~llg~~~~~~Dl~~~d~~~~~sl~~l~~~ 228 (458)
+...+|+++|+++|+||.+++.+++||+++|||+++|++++..|+..+||++.++|..|...
T Consensus 328 kvi~~F~~LG~~vAkal~D~Rildlpls~~Fykl~l~q~Lt~~dv~~vd~~l~~sL~~Le~v 389 (621)
T KOG0170|consen 328 KVIELFRLLGTFVAKALQDGRILDLPLSKAFYKLILGQELTSHDVTTVDPELAKSLLELELV 389 (621)
T ss_pred HHHHHHHHHHHHHHHHHhcCceEeeeccHHHHHHHhcCCcccccceecCHHHHHHHHHHHHH
Confidence 35678999999999999999999999999999999999999999999999999999888653
No 19
>KOG4427|consensus
Probab=98.27 E-value=3.5e-07 Score=95.56 Aligned_cols=40 Identities=23% Similarity=0.280 Sum_probs=37.1
Q ss_pred ccccccchhhhhhhhhhhhcCccccccccHHHHHhhcCCC
Q psy16438 166 TRYSKSCAFQGILLGIAIRTGHYLNLFLAEPIWTLLSGDI 205 (458)
Q Consensus 166 ~~~~~~~~~~G~lig~ai~~~~~l~l~~~~~~~k~llg~~ 205 (458)
+.|.+.|.|+||++|+|+|+|+.+|++|++.|...++|..
T Consensus 800 en~lqlfeFvGrmlGKAvYEGIvvDv~fa~vflsqlLG~~ 839 (1096)
T KOG4427|consen 800 ENHLQLFEFVGRMLGKAVYEGIVVDVPFASVFLSQLLGRH 839 (1096)
T ss_pred hchhHHHHHHHHHHHHHHhcceEEecccHHHHHHHHhccc
Confidence 3467889999999999999999999999999999999985
No 20
>KOG0940|consensus
Probab=97.87 E-value=4.3e-06 Score=83.48 Aligned_cols=103 Identities=17% Similarity=0.241 Sum_probs=82.8
Q ss_pred ccccccccCCCccccccCCceEEecCCCcccccccchhhhcccCcccccccchhhhhhhhhhhhcCccccccccHHHHHh
Q psy16438 121 PGEEVNALQMPFSTASSSNQFYVHLNPFENDITESNIRQYVVLPTTRYSKSCAFQGILLGIAIRTGHYLNLFLAEPIWTL 200 (458)
Q Consensus 121 ~~~~~~~l~l~F~~~~~s~~~~~~l~p~~~~v~~~n~~~yi~~p~~~~~~~~~~~G~lig~ai~~~~~l~l~~~~~~~k~ 200 (458)
+.+.+++....|..... + +.++++|... ++. .++.+|+|+|+.+|+|+.++..++.. -..|||.
T Consensus 70 S~e~~~p~~~~~~~~~~-~-~tlq~~P~sg-~~p------------~~l~~~~~vg~~~~l~~~h~~~~~~g-~r~F~~~ 133 (358)
T KOG0940|consen 70 SHEGFNPWYGLFQHSRK-D-YTLWLNPRSG-VNP------------GHLTYFRFVGGVLALAGWHMRFTDTG-QRPFYKH 133 (358)
T ss_pred ccccCCcceeeeeeccc-c-cccccCCccC-CCC------------CcccccccccccccccceeeEecCCC-ceehhhh
Confidence 44556676666654443 2 6677777655 433 26788999999999999999999998 9999999
Q ss_pred hcCCCCCccchhhhhHHHHHHHHHhhcCCcccccccccceEee
Q psy16438 201 LSGDILSLHDLMEIDQNFITVLSNMTQMPGEEVNALQMPFSTA 243 (458)
Q Consensus 201 llg~~~~~~Dl~~~d~~~~~sl~~l~~~~~~~~~~l~l~F~~~ 243 (458)
|++++.+++|.+.+|+++|++++++++.+... +++|+.+
T Consensus 134 i~~ktt~ldd~e~~d~e~~~s~~~~~en~~~~----~~~f~~~ 172 (358)
T KOG0940|consen 134 ILKKTTTLDDREAVDPEFYNSLTWIRENDPTN----DLTFSVE 172 (358)
T ss_pred hhcCccccCchhhcCccccccccccccCCccc----chhhhcc
Confidence 99999999999999999999999999876554 6777664
No 21
>KOG0942|consensus
Probab=97.16 E-value=0.00021 Score=77.07 Aligned_cols=63 Identities=27% Similarity=0.515 Sum_probs=55.8
Q ss_pred cchhhhchhhHHHhhhcccCccccccccCCCccccccC-Cce-EEecCCCccc--ccccchhhhccc
Q psy16438 101 HDLMEIDQNFITVLSNMTQMPGEEVNALQMPFSTASSS-NQF-YVHLNPFEND--ITESNIRQYVVL 163 (458)
Q Consensus 101 ~DL~~~D~~~~~~l~~l~~~~~~~~~~l~l~F~~~~~s-~~~-~~~l~p~~~~--v~~~n~~~yi~~ 163 (458)
+||.++||++|+.|..|+++.+++++.+.+.|++.++. |.. .+++.|+|.. ||++|+.+||..
T Consensus 774 ~dL~SlDPeLY~nLifLk~y~gddi~eL~L~FtVv~~e~G~~~vVeLkPnGs~i~VTneNvi~YihL 840 (1001)
T KOG0942|consen 774 HDLASLDPELYKNLIFLKNYNGDDISELQLDFTVVNSELGERQVVELKPNGSKIRVTNENVIEYIHL 840 (1001)
T ss_pred hhhcccCHHHHHHHHHHHhcCCCchhhccceEEEeccccccceeEEeccCCccceeechhhhhhhHH
Confidence 79999999999999999999999999999999976554 665 7788888886 999999999964
No 22
>KOG0943|consensus
Probab=97.14 E-value=0.00026 Score=77.69 Aligned_cols=75 Identities=17% Similarity=0.235 Sum_probs=64.6
Q ss_pred cccccchhhhhhhhhhhhcCccccccccHHHHHhhcCCCCCccchhhhhHHHHHHHHHhhcCCcccccccccceEee
Q psy16438 167 RYSKSCAFQGILLGIAIRTGHYLNLFLAEPIWTLLSGDILSLHDLMEIDQNFITVLSNMTQMPGEEVNALQMPFSTA 243 (458)
Q Consensus 167 ~~~~~~~~~G~lig~ai~~~~~l~l~~~~~~~k~llg~~~~~~Dl~~~d~~~~~sl~~l~~~~~~~~~~l~l~F~~~ 243 (458)
-.+.-|+-+||++|+|+..|.+.++.|+..++|.|+|.++.|.|+..+||.++.+|+.|...... .+++..|+..
T Consensus 2740 ~RLaafRniGRIlGiCL~Qgdi~PirfnRHifk~iL~l~icW~Df~FfDPVlfenLRaLfkAhps--Sd~DadFS~m 2814 (3015)
T KOG0943|consen 2740 ARLAAFRNIGRILGICLLQGDICPIRFNRHIFKVILGLKICWHDFAFFDPVLFENLRALFKAHPS--SDADADFSAM 2814 (3015)
T ss_pred HHHHHHHhhhhHhhhhhhcCcccceeehhHHHHHHhcCceehhhhccccHHHHHHHHHHHhcCCc--ccccchhhHH
Confidence 35677999999999999999999999999999999999999999999999999999998654331 2355667664
No 23
>PHA02681 ORF089 virion membrane protein; Provisional
Probab=20.04 E-value=48 Score=25.76 Aligned_cols=20 Identities=15% Similarity=0.233 Sum_probs=17.7
Q ss_pred hCCHHHHhhhceeccCCCCC
Q psy16438 349 EMSNQDRVLFIRFVSGRSRL 368 (458)
Q Consensus 349 ~~s~e~r~~fL~FvTG~~rl 368 (458)
+||++|-|.|=+|+|||+.=
T Consensus 51 ~lTpDQVrAlHRlvTsSpe~ 70 (92)
T PHA02681 51 KMTDDQVRAFHALVTSSPED 70 (92)
T ss_pred cCCHHHHHHHHHHHhCCCCC
Confidence 59999999999999999643
Done!