Query psy16438
Match_columns 458
No_of_seqs 260 out of 1675
Neff 8.2
Searched_HMMs 29240
Date Fri Aug 16 21:17:27 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16438.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16438hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zvd_A SMAD ubiquitination reg 100.0 5E-79 1.7E-83 614.3 24.3 308 1-433 61-380 (380)
2 1c4z_A E6AP, ubiquitin-protein 100.0 2.4E-79 8.1E-84 612.1 21.4 306 1-432 45-357 (358)
3 1nd7_A WW domain-containing pr 100.0 6.3E-78 2.1E-82 605.7 27.6 303 1-428 60-374 (374)
4 3h1d_A E3 ubiquitin-protein li 100.0 6.9E-78 2.4E-82 607.6 24.0 308 1-432 84-404 (405)
5 2oni_A E3 ubiquitin-protein li 100.0 1.2E-77 4E-82 606.1 22.8 301 1-426 80-392 (392)
6 3olm_A E3 ubiquitin-protein li 100.0 7.3E-77 2.5E-81 606.3 26.1 308 1-432 111-428 (429)
7 3pt3_A E3 ubiquitin-protein li 100.0 5.5E-38 1.9E-42 261.3 6.7 112 316-432 2-117 (118)
8 1c4z_A E6AP, ubiquitin-protein 99.4 9.1E-14 3.1E-18 138.5 5.1 92 121-230 62-153 (358)
9 3h1d_A E3 ubiquitin-protein li 99.4 2.4E-13 8.2E-18 137.0 5.4 98 121-232 101-198 (405)
10 1zvd_A SMAD ubiquitination reg 99.2 1.1E-11 3.9E-16 124.3 5.1 94 121-228 78-171 (380)
11 1nd7_A WW domain-containing pr 99.2 9.5E-12 3.3E-16 124.7 3.5 99 120-232 76-174 (374)
12 2oni_A E3 ubiquitin-protein li 99.1 2.1E-11 7.2E-16 122.8 3.1 98 120-230 96-193 (392)
13 3olm_A E3 ubiquitin-protein li 99.1 2.8E-11 9.5E-16 123.2 4.0 95 121-229 128-222 (429)
14 1l6x_B Minimized B-domain of p 25.1 51 0.0017 20.1 2.3 23 338-360 4-28 (34)
No 1
>1zvd_A SMAD ubiquitination regulatory factor 2; ubiquitin ligasecatalytic mechanism,X-RAY ligase; 2.10A {Homo sapiens}
Probab=100.00 E-value=5e-79 Score=614.34 Aligned_cols=308 Identities=25% Similarity=0.441 Sum_probs=266.2
Q ss_pred CCCCCCCcchHHHHHHHHHHHhcCCCCcceeeCCCCCCCCCCCcceEEECCCCCCCCCchhhHHHHHHHHHHHHHhcCcc
Q psy16438 1 ESVDDAGGGYNECLSELCEELRDNSLLKVLIPTPNSNDENGSNRDKFILNPDPFAAAGSNDKLFFFLGILLGIAIRTGHY 80 (458)
Q Consensus 1 E~~~D~GG~~RE~~~~l~~el~~~p~~~lf~~~~n~~~~~g~~~~~~~~np~~~~~~~~~~~~f~f~G~llg~al~~~~~ 80 (458)
|+|+|+|||+||||+++++|++ +|.+|||.++++.. .++.|||.+ ...++|+++|+|+|+++|+||+++.+
T Consensus 61 E~G~D~GG~~rEff~ll~~el~-~p~~gLF~~~~~~~-------~~~~~np~s-~~~~~~l~~f~flG~l~g~al~~~~~ 131 (380)
T 1zvd_A 61 EEGLDYGGVAREWLYLLSHEML-NPYYGLFQYSRDDI-------YTLQINPDS-AVNPEHLSYFHFVGRIMGMAVFHGHY 131 (380)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHT-SGGGSSEEEETTEE-------EEEEECTTG-GGSTTHHHHHHHHHHHHHHHHHTTCC
T ss_pred CcCcCCCccHHHHHHHHHHHHc-CCcCCCeeccCCCC-------eeeccCchh-hcChHHHHHHHHhHHHHHHHHhCCce
Confidence 8999999999999999999999 99999999876432 356789974 44678999999999999999999999
Q ss_pred ccccccHHHHHHHcCCCCCccchhhhchhhHHHhhhcccCccccccccCCCccccccCCceEEecCCCcccccccchhhh
Q psy16438 81 LNLFLAEPIWTLLSGDILSLHDLMEIDQNFITVLSNMTQMPGEEVNALQMPFSTASSSNQFYVHLNPFENDITESNIRQY 160 (458)
Q Consensus 81 l~l~~~~~f~k~L~g~~~t~~DL~~~D~~~~~~l~~l~~~~~~~~~~l~l~F~~~~~s~~~~~~l~p~~~~v~~~n~~~y 160 (458)
++++||++|||+|+|.+++++||.++||+++++|.+|.+.+.+ +.++
T Consensus 132 ld~~f~~~f~k~llg~~~~l~Dl~~~Dp~l~~sL~~ll~~d~~--~~l~------------------------------- 178 (380)
T 1zvd_A 132 IDGGFTLPFYKQLLGKSITLDDMELVDPDLHNSLVWILENDIT--GVLD------------------------------- 178 (380)
T ss_dssp CCCCCCHHHHHHHTTCCCCSTTHHHHCHHHHHHHHHHHHSCCT--TTSC-------------------------------
T ss_pred eCCcCCHHHHHHHhCCCCCHHHHHHhCHHHHHHHHHHHhCCcc--cccc-------------------------------
Confidence 9999999999999999999999999999999988888654311 1234
Q ss_pred cccCcccccccchhhhhhhhhhhhcCccccccccHHHHHhhcCCCCCccchhhhhHHHHHHHHHhhcCCcccccccccce
Q psy16438 161 VVLPTTRYSKSCAFQGILLGIAIRTGHYLNLFLAEPIWTLLSGDILSLHDLMEIDQNFITVLSNMTQMPGEEVNALQMPF 240 (458)
Q Consensus 161 i~~p~~~~~~~~~~~G~lig~ai~~~~~l~l~~~~~~~k~llg~~~~~~Dl~~~d~~~~~sl~~l~~~~~~~~~~l~l~F 240 (458)
++|
T Consensus 179 -----------------------------------------------------------------------------ltF 181 (380)
T 1zvd_A 179 -----------------------------------------------------------------------------HTF 181 (380)
T ss_dssp -----------------------------------------------------------------------------CCS
T ss_pred -----------------------------------------------------------------------------cee
Confidence 444
Q ss_pred EeecC--CCeeEEecCCC--CCCCChhhHHHHHHHHHHhHHHH-HHHHHHHHhcccccccccccccCCCHHHHhHhhccC
Q psy16438 241 STASS--SNQFYVHLNPF--ENDITESNIRQYVVLVLQFRLHE-FDERIHYVRKGLYQVIPVPLLHLFSGAEIETLVCST 315 (458)
Q Consensus 241 ~~~~~--~~~~~v~l~~~--~~~Vt~~N~~eyv~~~~~~~l~~-~~~~~~afr~Gf~~vip~~~l~~f~~~eL~~licG~ 315 (458)
+++.+ +...+++|+|+ +++||.+|+++||+++++|++.+ ++.|++||++||++|+|.++|++|+|+||+.++||.
T Consensus 182 ~~~~~~~g~~~~veL~p~G~~i~VT~~N~~eYv~l~~~~~l~~~i~~q~~af~~Gf~~vip~~~L~~F~~~ELe~li~G~ 261 (380)
T 1zvd_A 182 CVEHNAYGEIIQHELKPNGKSIPVNEENKKEYVRLYVNWRFLRGIEAQFLALQKGFNEVIPQHLLKTFDEKELELIICGL 261 (380)
T ss_dssp EEEEEETTEEEEEESSTTCCCCCCTTTTHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHSCGGGGTTCCHHHHHHHHHCB
T ss_pred EEeeecCCcEeEEecCCCCCCCccccccHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHhHHHHHhCCCHHHHHHhhCCC
Confidence 44322 22345788775 78999999999999999999986 699999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHccCCCCCCCCCHHHHHHHHHHHhCCHHHHhhhceeccCCCCCCCCcccccCCc-------eEEEEecCC
Q psy16438 316 PEISIDVLKQVTFYKDEMNVTTPQIIWFWEVLEEMSNQDRVLFIRFVSGRSRLAKSAREFRGLK-------FEIQFLDRD 388 (458)
Q Consensus 316 ~~i~~~~l~~~~~y~~~~~~~~~~i~~fw~vl~~~s~e~r~~fL~FvTG~~rlP~~~~g~~~l~-------~~i~~~~~~ 388 (458)
++||+++|+++|.|+|+ ++++++|+|||+||++||++||++||+|||||+|+|++ ||+++. |+|+..
T Consensus 262 ~~id~~dl~~~t~y~gy-~~~~~~i~~FW~vv~~~s~eer~~fL~FvTGs~rlP~~--Gf~~L~~~~gp~~f~I~~~--- 335 (380)
T 1zvd_A 262 GKIDVNDWKVNTRLKHC-TPDSNIVKWFWKAVEFFDEERRARLLQFVTGSSRVPLQ--GFKALQGAAGPRLFTIHQI--- 335 (380)
T ss_dssp SSCCHHHHHHTEEEESS-CTTSHHHHHHHHHHHHSCHHHHHHHHHHHHSCSSBCTT--CGGGCEETTEECCEEEEEC---
T ss_pred CCCChhhhhhccEecCC-CCCcchhhhHHHHHHhCCHHHHHHHHHHHhCCCCCCCc--chhhccccCCCCceEEEec---
Confidence 99999999999999965 99999999999999999999999999999999999997 888873 666642
Q ss_pred CCCCCCCceecccCCeeecCCCCCHHHHHHHHHHHHHhCccccCc
Q psy16438 389 CDPDTLFPESSTCFFLLRLPRYTNKDTLKHKLVEAIHLSKAINTD 433 (458)
Q Consensus 389 ~~~~~~LP~a~TCf~~L~LP~Yss~e~l~~kL~~AI~~~~~f~~d 433 (458)
+.++++||+||||||+|+||.|+|+|+||+||++||++|+||+.+
T Consensus 336 ~~~~~~LP~a~TCfn~L~LP~Y~s~e~l~~kL~~AI~~~~GF~l~ 380 (380)
T 1zvd_A 336 DACTNNLPKAHTCFNRIDIPPYESYEKLYEKLLTAIEETCGFAVE 380 (380)
T ss_dssp CCCTTSCCEEEGGGTEEEECCCSSHHHHHHHHHHHHCC-------
T ss_pred CCCCCCCCEEecCcCEEECCCCCCHHHHHHHHHHHHHhCCCcCcC
Confidence 346789999999999999999999999999999999999999863
No 2
>1c4z_A E6AP, ubiquitin-protein ligase E3A; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.148.1.1 PDB: 1d5f_A
Probab=100.00 E-value=2.4e-79 Score=612.09 Aligned_cols=306 Identities=25% Similarity=0.430 Sum_probs=268.5
Q ss_pred CCCCCCCcchHHHHHHHHHHHhcCCCCcceeeCCCCCCCCCCCcceEEECCCCCCCCCchhhHHHHHHHHHHHHHhcCcc
Q psy16438 1 ESVDDAGGGYNECLSELCEELRDNSLLKVLIPTPNSNDENGSNRDKFILNPDPFAAAGSNDKLFFFLGILLGIAIRTGHY 80 (458)
Q Consensus 1 E~~~D~GG~~RE~~~~l~~el~~~p~~~lf~~~~n~~~~~g~~~~~~~~np~~~~~~~~~~~~f~f~G~llg~al~~~~~ 80 (458)
|+|+|+|||+||||++|++|++ +|++|||+++++.. .++|||.+ . .+.++|+|+|+++|+||+++.+
T Consensus 45 E~G~D~GG~~rEff~ll~~el~-~p~~glF~~~~~~~--------~~~~np~s--~--~~~~~f~flG~lig~Al~~~~~ 111 (358)
T 1c4z_A 45 EQGVDEGGVSKEFFQLVVEEIF-NPDIGMFTYDESTK--------LFWFNPSS--F--ETEGQFTLIGIVLGLAIYNNCI 111 (358)
T ss_dssp CCCCCSSHHHHHHHHHHHHHHT-SGGGCSEEEETTTT--------EEEECTTC--C--SCHHHHHHHHHHHHHHHHTTCC
T ss_pred CcCcCCCccHHHHHHHHHHHHc-CCcCCceeecCCCC--------eEeeCCcc--c--cchHHHHhHHHHHHHHHHCCCC
Confidence 8999999999999999999999 99999999987654 48999973 2 3467999999999999999999
Q ss_pred ccccccHHHHHHHcCCCCCccchhhhchhhHHHhhhcccCccccccccCCCccccccCCceEEecCCCcccccccchhhh
Q psy16438 81 LNLFLAEPIWTLLSGDILSLHDLMEIDQNFITVLSNMTQMPGEEVNALQMPFSTASSSNQFYVHLNPFENDITESNIRQY 160 (458)
Q Consensus 81 l~l~~~~~f~k~L~g~~~t~~DL~~~D~~~~~~l~~l~~~~~~~~~~l~l~F~~~~~s~~~~~~l~p~~~~v~~~n~~~y 160 (458)
++++||++|||+|+|.+++++||.++||+++++|.+|++++.+..+.+
T Consensus 112 ld~~f~~~f~k~llg~~~~l~Dl~~~Dp~l~~sL~~l~~~~~d~~~~l-------------------------------- 159 (358)
T 1c4z_A 112 LDVHFPMVVYRKLMGKKGTFRDLGDSHPVLYQSLKDLLEYEGNVEDDM-------------------------------- 159 (358)
T ss_dssp CCCCCCHHHHHHHTTCCCCHHHHHHHSHHHHHHHHHHHHCCSCHHHHT--------------------------------
T ss_pred cCCcCCHHHHHHHhCCCCCHHHHHHhCHHHHHHHHHHHhcCCchhhhc--------------------------------
Confidence 999999999999999999999999999999999998877653222233
Q ss_pred cccCcccccccchhhhhhhhhhhhcCccccccccHHHHHhhcCCCCCccchhhhhHHHHHHHHHhhcCCcccccccccce
Q psy16438 161 VVLPTTRYSKSCAFQGILLGIAIRTGHYLNLFLAEPIWTLLSGDILSLHDLMEIDQNFITVLSNMTQMPGEEVNALQMPF 240 (458)
Q Consensus 161 i~~p~~~~~~~~~~~G~lig~ai~~~~~l~l~~~~~~~k~llg~~~~~~Dl~~~d~~~~~sl~~l~~~~~~~~~~l~l~F 240 (458)
+++|
T Consensus 160 ----------------------------------------------------------------------------~ltF 163 (358)
T 1c4z_A 160 ----------------------------------------------------------------------------MITF 163 (358)
T ss_dssp ----------------------------------------------------------------------------CCBS
T ss_pred ----------------------------------------------------------------------------cceE
Confidence 4444
Q ss_pred Eeec---CCCeeEEecCCC--CCCCChhhHHHHHHHHHHhHHHH-HHHHHHHHhccccccccccccc-CCCHHHHhHhhc
Q psy16438 241 STAS---SSNQFYVHLNPF--ENDITESNIRQYVVLVLQFRLHE-FDERIHYVRKGLYQVIPVPLLH-LFSGAEIETLVC 313 (458)
Q Consensus 241 ~~~~---~~~~~~v~l~~~--~~~Vt~~N~~eyv~~~~~~~l~~-~~~~~~afr~Gf~~vip~~~l~-~f~~~eL~~lic 313 (458)
+++. .+...+++|+|+ +++||.+||++||+++++|++++ ++.|++||++||++|+|..+|. +|+|+||+.++|
T Consensus 164 ~~~~~~~~G~~~~~eL~p~G~~i~VT~~N~~eYv~l~~~~~l~~~i~~q~~af~~Gf~~vip~~~L~~lF~~~ELe~li~ 243 (358)
T 1c4z_A 164 QISQTDLFGNPMMYDLKENGDKIPITNENRKEFVNLYSDYILNKSVEKQFKAFRRGFHMVTNESPLKYLFRPEEIELLIC 243 (358)
T ss_dssp EEEECCTTTCCEEEESSTTTTTSBCCTTTHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHSSSCSCSCSSTHHHHHHHH
T ss_pred EEeccccCCCeeeeecCCCCcccccccccHHHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcchhhcCCCHHHHHHHhh
Confidence 4432 123345788875 78999999999999999999987 6999999999999999999886 899999999999
Q ss_pred cCCCCCHHHHHHHccCCCCCCCCCHHHHHHHHHHHhCCHHHHhhhceeccCCCCCCCCcccccCCceEEEEecCCCCCCC
Q psy16438 314 STPEISIDVLKQVTFYKDEMNVTTPQIIWFWEVLEEMSNQDRVLFIRFVSGRSRLAKSAREFRGLKFEIQFLDRDCDPDT 393 (458)
Q Consensus 314 G~~~i~~~~l~~~~~y~~~~~~~~~~i~~fw~vl~~~s~e~r~~fL~FvTG~~rlP~~~~g~~~l~~~i~~~~~~~~~~~ 393 (458)
|.++||+++|+++|.|.|+|++++++|+|||+|+++||++||++||+|||||+|+|++ ||++++++|+.. +.+++
T Consensus 244 G~~~id~~~l~~~t~y~~gy~~~~~~i~~FW~vv~~~~~eer~~fL~FvTGs~rlP~~--Gf~~l~~~I~~~---~~~~~ 318 (358)
T 1c4z_A 244 GSRNLDFQALEETTEYDGGYTRDSVLIREFWEIVHSFTDEQKRLFLQFTTGTDRAPVG--GLGKLKMIIAKN---GPDTE 318 (358)
T ss_dssp CBCCCCCTTTSTTCEEESSCCSSCHHHHHHHHHHHTSCHHHHHHHHHHHSSSSSBCTT--CGGGGCCEEEEE---EESCS
T ss_pred cccCCCHHHHHHHceeCCCCCCCcchhhhHHHHHHhCCHHHHHHHHHHHcCCCCCCCC--CcccceeeeecC---CCCCC
Confidence 9999999999999999988899999999999999999999999999999999999997 999988888753 33467
Q ss_pred CCceecccCCeeecCCCCCHHHHHHHHHHHHHhCccccC
Q psy16438 394 LFPESSTCFFLLRLPRYTNKDTLKHKLVEAIHLSKAINT 432 (458)
Q Consensus 394 ~LP~a~TCf~~L~LP~Yss~e~l~~kL~~AI~~~~~f~~ 432 (458)
+||+||||||+|+||+|+|+|+||+||++||++|+||+.
T Consensus 319 ~LP~a~TCfn~L~LP~Y~s~e~l~~kL~~AI~~~~GFgl 357 (358)
T 1c4z_A 319 RLPTSHTCFNVLLLPEYSSKEKLKERLLKAITYAKGFGM 357 (358)
T ss_dssp CCCEEEGGGTEEEEEECSCHHHHHHHHHHHHHHC-----
T ss_pred CCeEEEccCCEeECCCCCCHHHHHHHHHHHHHhCCCCCc
Confidence 999999999999999999999999999999999999974
No 3
>1nd7_A WW domain-containing protein 1; HECT, ubiquitin, ligase, WWP1; 2.10A {Homo sapiens} SCOP: d.148.1.1 PDB: 3tug_A
Probab=100.00 E-value=6.3e-78 Score=605.72 Aligned_cols=303 Identities=28% Similarity=0.461 Sum_probs=267.9
Q ss_pred CCCCCCCcchHHHHHHHHHHHhcCCCCcceeeCCCCCCCCCCCcceEEECCCCCCCCCchhhHHHHHHHHHHHHHhcCcc
Q psy16438 1 ESVDDAGGGYNECLSELCEELRDNSLLKVLIPTPNSNDENGSNRDKFILNPDPFAAAGSNDKLFFFLGILLGIAIRTGHY 80 (458)
Q Consensus 1 E~~~D~GG~~RE~~~~l~~el~~~p~~~lf~~~~n~~~~~g~~~~~~~~np~~~~~~~~~~~~f~f~G~llg~al~~~~~ 80 (458)
|+|+|+|||+||||++|++|++ +|.+|||.++++.. .++.|||.+ ...++|+++|+|+|+++|+||+++.+
T Consensus 60 E~G~D~GG~~rEff~ll~~el~-~p~~~lF~~~~~~~-------~~~~~~p~s-~~~~~~l~~f~flG~lig~al~~~~~ 130 (374)
T 1nd7_A 60 EEGLDYGGLAREWFFLLSHEVL-NPMYCLFEYAGKNN-------YCLQINPAS-TINPDHLSYFCFIGRFIAMALFHGKF 130 (374)
T ss_dssp TCCCCCTHHHHHHHHHHHHHHT-CGGGSSEEESSSSS-------CCEEECGGG-GGSTTHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCcCCCccHHHHHHHHHHHHc-CCccccccccCCCC-------ceeccCCcc-cCCHHHHHHHHHHHHHHHHHHhcCCe
Confidence 8999999999999999999999 99999999876432 357899974 45678999999999999999999999
Q ss_pred ccccccHHHHHHHcCCCCCccchhhhchhhHHHhhhcccCccccccccCCCccccccCCceEEecCCCcccccccchhhh
Q psy16438 81 LNLFLAEPIWTLLSGDILSLHDLMEIDQNFITVLSNMTQMPGEEVNALQMPFSTASSSNQFYVHLNPFENDITESNIRQY 160 (458)
Q Consensus 81 l~l~~~~~f~k~L~g~~~t~~DL~~~D~~~~~~l~~l~~~~~~~~~~l~l~F~~~~~s~~~~~~l~p~~~~v~~~n~~~y 160 (458)
++++||++|||+|+|.+++++||.++||+++++|.+|++++.++. .++++|+
T Consensus 131 ld~~f~~~f~k~llg~~~~l~Dl~~~Dp~l~~sL~~l~~~~~~~~-~l~l~F~--------------------------- 182 (374)
T 1nd7_A 131 IDTGFSLPFYKRMLSKKLTIKDLESIDTEFYNSLIWIRDNNIEEC-GLEMYFS--------------------------- 182 (374)
T ss_dssp CCCCCCHHHHHHHTTCCCCHHHHHTTCHHHHHHHHHHHSSCSCSS-CCCCBSE---------------------------
T ss_pred eCCcCCHHHHHHHhCCCCCHHHHHHhhHHHHHhhhhhccCChhhh-hcceeEE---------------------------
Confidence 999999999999999999999999999999999988876653322 2444444
Q ss_pred cccCcccccccchhhhhhhhhhhhcCccccccccHHHHHhhcCCCCCccchhhhhHHHHHHHHHhhcCCcccccccccce
Q psy16438 161 VVLPTTRYSKSCAFQGILLGIAIRTGHYLNLFLAEPIWTLLSGDILSLHDLMEIDQNFITVLSNMTQMPGEEVNALQMPF 240 (458)
Q Consensus 161 i~~p~~~~~~~~~~~G~lig~ai~~~~~l~l~~~~~~~k~llg~~~~~~Dl~~~d~~~~~sl~~l~~~~~~~~~~l~l~F 240 (458)
T Consensus 183 -------------------------------------------------------------------------------- 182 (374)
T 1nd7_A 183 -------------------------------------------------------------------------------- 182 (374)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EeecC--CCeeEEecCCC--CCCCChhhHHHHHHHHHHhHHHH-HHHHHHHHhcccccccccccccCCCHHHHhHhhccC
Q psy16438 241 STASS--SNQFYVHLNPF--ENDITESNIRQYVVLVLQFRLHE-FDERIHYVRKGLYQVIPVPLLHLFSGAEIETLVCST 315 (458)
Q Consensus 241 ~~~~~--~~~~~v~l~~~--~~~Vt~~N~~eyv~~~~~~~l~~-~~~~~~afr~Gf~~vip~~~l~~f~~~eL~~licG~ 315 (458)
++.+ +...+++|+|+ +++||.+|+++||+++++|++++ ++.|++||++||++|+|.++|++|+|+||+.++||.
T Consensus 183 -~~~~~~G~~~~veL~p~G~~i~VT~~N~~eYv~l~~~~~l~~~i~~q~~af~~Gf~~vip~~~L~~F~~~ELe~li~G~ 261 (374)
T 1nd7_A 183 -VDMEILGKVTSHDLKLGGSNILVTEENKDEYIGLMTEWRFSRGVQEQTKAFLDGFNEVVPLQWLQYFDEKELEVMLCGM 261 (374)
T ss_dssp -ECCCSSTTCCCEESSTTGGGCBCCTTTHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHSCGGGGTTCCHHHHHHHHHCC
T ss_pred -EeeccCCceeeEecCCCCcCceeccccHHHHHHHHHHHHHhccHHHHHHHHHHhhhhhCCHHHHhcCCHHHHHHHhcCC
Confidence 3221 22234788776 78999999999999999999997 699999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHccCCCCCCCCCHHHHHHHHHHHhCCHHHHhhhceeccCCCCCCCCcccccCC-------ceEEEEecCC
Q psy16438 316 PEISIDVLKQVTFYKDEMNVTTPQIIWFWEVLEEMSNQDRVLFIRFVSGRSRLAKSAREFRGL-------KFEIQFLDRD 388 (458)
Q Consensus 316 ~~i~~~~l~~~~~y~~~~~~~~~~i~~fw~vl~~~s~e~r~~fL~FvTG~~rlP~~~~g~~~l-------~~~i~~~~~~ 388 (458)
++||+++|+++|.|.| |++++++|+|||+||++||++||++||+|||||+|+|++ ||+++ +|+|+..
T Consensus 262 ~~id~~dl~~~t~y~g-y~~~~~~i~~FW~vv~~~~~eer~~fL~FvTGs~rlP~~--Gf~~L~~~~gp~~f~I~~~--- 335 (374)
T 1nd7_A 262 QEVDLADWQRNTVYRH-YTRNSKQIIWFWQFVKETDNEVRMRLLQFVTGTCRLPLG--GFAELMGSNGPQKFCIEKV--- 335 (374)
T ss_dssp CCCCHHHHHHTEEEES-CCTTSHHHHHHHHHHHHSCHHHHHHHHHHHHSCSCCCTT--CGGGCEETTEECCEEEECC---
T ss_pred CCCCHHHHhhheEEcC-CCCCCcceeeHHHHHHhcCHHHHHHHHHHHhCCCCCCCc--chhhccccCCCCceEEEeC---
Confidence 9999999999999998 699999999999999999999999999999999999997 88876 3566532
Q ss_pred CCCCCCCceecccCCeeecCCCCCHHHHHHHHHHHHHhCc
Q psy16438 389 CDPDTLFPESSTCFFLLRLPRYTNKDTLKHKLVEAIHLSK 428 (458)
Q Consensus 389 ~~~~~~LP~a~TCf~~L~LP~Yss~e~l~~kL~~AI~~~~ 428 (458)
.++++||+||||||+|+||+|+|+|+||+||++||++|+
T Consensus 336 -~~~~~LP~a~TCfn~L~LP~Y~s~e~l~~kL~~AI~~~e 374 (374)
T 1nd7_A 336 -GKDTWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEETE 374 (374)
T ss_dssp -SCTTSCCEEEGGGTEEECCCCSSHHHHHHHHHHHHHSCC
T ss_pred -CCCCcCCEEEcccCEEECCCCCCHHHHHHHHHHHHHhcC
Confidence 346899999999999999999999999999999999974
No 4
>3h1d_A E3 ubiquitin-protein ligase HUWE1; E3ligase, HECT, LOBE, alternative splicing, chromosomal rearrangement, cytoplasm, differentiation; 1.89A {Homo sapiens} PDB: 3g1n_A
Probab=100.00 E-value=6.9e-78 Score=607.56 Aligned_cols=308 Identities=28% Similarity=0.470 Sum_probs=263.4
Q ss_pred CCCCCCCcchHHHHHHHHHHHhcCCCCcceeeCCCCCCCCCCCcceEEECCCCCCCCCchhhHHHHHHHHHHHHHhcCcc
Q psy16438 1 ESVDDAGGGYNECLSELCEELRDNSLLKVLIPTPNSNDENGSNRDKFILNPDPFAAAGSNDKLFFFLGILLGIAIRTGHY 80 (458)
Q Consensus 1 E~~~D~GG~~RE~~~~l~~el~~~p~~~lf~~~~n~~~~~g~~~~~~~~np~~~~~~~~~~~~f~f~G~llg~al~~~~~ 80 (458)
|+|+|+||++||||++|++|++ +|.+|||+++++.. .+|+|||.+ ...++|+++|+|+|+++|+||+++.+
T Consensus 84 E~G~D~GG~~rEff~ll~~elf-~p~~gLF~~~~~~~-------~~~~~np~s-~~~~~~l~~f~flGrliG~Al~~~~~ 154 (405)
T 3h1d_A 84 EEGQDAGGLLREWYMIISREMF-NPMYALFRTSPGDR-------VTYTINPSS-HANPNHLSYFKFVGRIVAKAVYDNRL 154 (405)
T ss_dssp CCSCCCTTHHHHHHHHHHHHTT-CGGGTSEEECSSCS-------SEEEECCC------CHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCCcCCChhHHHHHHHHHHHHh-CCcccceeeccCCc-------eeEeeCCcc-ccChhHHHHHHHHhHHHHHHHhCCCc
Confidence 8999999999999999999999 99999999987643 468899974 45678999999999999999999999
Q ss_pred ccccccHHHHHHHcCCCCCccchhhhchhhHHHhhhcccCccccccccCCCccccccCCceEEecCCCcccccccchhhh
Q psy16438 81 LNLFLAEPIWTLLSGDILSLHDLMEIDQNFITVLSNMTQMPGEEVNALQMPFSTASSSNQFYVHLNPFENDITESNIRQY 160 (458)
Q Consensus 81 l~l~~~~~f~k~L~g~~~t~~DL~~~D~~~~~~l~~l~~~~~~~~~~l~l~F~~~~~s~~~~~~l~p~~~~v~~~n~~~y 160 (458)
++++||++|||+|+|.+++++||.++||+++++|.+|++++.+++ .++++|+
T Consensus 155 ld~~F~~~f~K~Llg~~~~l~DL~~~Dp~l~~sL~~ll~~~~~~l-~l~ltF~--------------------------- 206 (405)
T 3h1d_A 155 LECYFTRSFYKHILGKSVRYTDMESEDYHFYQGLVYLLENDVSTL-GYDLTFS--------------------------- 206 (405)
T ss_dssp CCCEECHHHHHHHHTCCCCGGGHHHHCHHHHHHHHHHHHSCGGGS-SSCEEEE---------------------------
T ss_pred cCCCccHHHHHHhcCCCCCHHHHHHhhHHHHHHHhhhhcCChhhh-cceeEEE---------------------------
Confidence 999999999999999999999999999999999999987643222 2334443
Q ss_pred cccCcccccccchhhhhhhhhhhhcCccccccccHHHHHhhcCCCCCccchhhhhHHHHHHHHHhhcCCcccccccccce
Q psy16438 161 VVLPTTRYSKSCAFQGILLGIAIRTGHYLNLFLAEPIWTLLSGDILSLHDLMEIDQNFITVLSNMTQMPGEEVNALQMPF 240 (458)
Q Consensus 161 i~~p~~~~~~~~~~~G~lig~ai~~~~~l~l~~~~~~~k~llg~~~~~~Dl~~~d~~~~~sl~~l~~~~~~~~~~l~l~F 240 (458)
T Consensus 207 -------------------------------------------------------------------------------- 206 (405)
T 3h1d_A 207 -------------------------------------------------------------------------------- 206 (405)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EeecCC--CeeEEecCCC--CCCCChhhHHHHHHHHHHhHHHH-HHHHHHHHhcccccccccccccCCCHHHHhHhhccC
Q psy16438 241 STASSS--NQFYVHLNPF--ENDITESNIRQYVVLVLQFRLHE-FDERIHYVRKGLYQVIPVPLLHLFSGAEIETLVCST 315 (458)
Q Consensus 241 ~~~~~~--~~~~v~l~~~--~~~Vt~~N~~eyv~~~~~~~l~~-~~~~~~afr~Gf~~vip~~~l~~f~~~eL~~licG~ 315 (458)
++.+. ...+++|+|+ +++||.+||++||+++++|++++ ++.|++||++||++|+|.++|++|+|+||+.++||.
T Consensus 207 -~~~~~~G~~~~veL~p~G~~i~VT~~Nk~eYV~l~~~~~l~~~v~~q~~aF~~Gf~~Vip~~~L~lF~~~ELe~Li~G~ 285 (405)
T 3h1d_A 207 -TEVQEFGVAEVRDLKPNGANILVTEENKKEYVHLVCQMRMTGAIRKQLAAFLEGFYEIIPKRLISIFTEQELELLISGL 285 (405)
T ss_dssp -TTTCCEEECCGGGGSSCSSEEECCTTTHHHHHHHHHHHHHTGGGHHHHHHHHHHHHHHSCHHHHTTSCHHHHHHHHHCC
T ss_pred -EEeecCCceeeEeecCCCCCCccchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhCCCHHHHHHHhCCC
Confidence 22111 1112566665 78999999999999999999986 699999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHccCCCCCCCCCHHHHHHHHHHHhCCHHHHhhhceeccCCCCCCCCcccccCC-------ceEEEEecCC
Q psy16438 316 PEISIDVLKQVTFYKDEMNVTTPQIIWFWEVLEEMSNQDRVLFIRFVSGRSRLAKSAREFRGL-------KFEIQFLDRD 388 (458)
Q Consensus 316 ~~i~~~~l~~~~~y~~~~~~~~~~i~~fw~vl~~~s~e~r~~fL~FvTG~~rlP~~~~g~~~l-------~~~i~~~~~~ 388 (458)
++||+++|+++|.|+|+ +.++++|+|||+|+++||++||++||+|||||+|+|++ ||+.+ +|+|+..
T Consensus 286 ~~id~~dl~~~t~y~gy-~~~~~~i~~FW~v~~~~s~eer~~fL~FvTGs~rlP~~--Gf~~L~~~~~~~~f~i~~~--- 359 (405)
T 3h1d_A 286 PTIDIDDLKSNTEYHKY-QSNSIQIQWFWRALRSFDQADRAKFLQFVTGTSKVPLQ--GFAALEGMNGIQKFQIHRD--- 359 (405)
T ss_dssp CCCCHHHHHHTEEEESS-CTTCHHHHHHHHHHHHSCHHHHHHHHHHHHSSSCCCTT--CGGGCBCSSSBCCEEEEEE---
T ss_pred CCCCHHHHHhhCcccCC-CCCCchHhhHHHHHHhCCHHHHHHHHHHHcCCCCCCCC--ccccccccCCCceEEEeeC---
Confidence 99999999999999864 99999999999999999999999999999999999997 77766 3555433
Q ss_pred CCCCCCCceecccCCeeecCCCCCHHHHHHHHHHHHHh-CccccC
Q psy16438 389 CDPDTLFPESSTCFFLLRLPRYTNKDTLKHKLVEAIHL-SKAINT 432 (458)
Q Consensus 389 ~~~~~~LP~a~TCf~~L~LP~Yss~e~l~~kL~~AI~~-~~~f~~ 432 (458)
+.++++||+||||||+|+||.|+|+|+||+||++||++ ++||+.
T Consensus 360 ~~~~~~LP~a~TCfn~L~LP~Yss~e~l~ekL~~AI~e~~~GFgl 404 (405)
T 3h1d_A 360 DRSTDRLPSAHTCFNQLDLPAYESFEKLRHMLLLAIQEASEGFGL 404 (405)
T ss_dssp CSCTTSCCEEEGGGTEEEEECCSSHHHHHHHHHHHHHC-------
T ss_pred CCCCCCCccceeccCEeECCCCCCHHHHHHHHHHHHHhCCCCcCC
Confidence 34578999999999999999999999999999999998 578874
No 5
>2oni_A E3 ubiquitin-protein ligase NEDD4-like protein; alpha and beta protein (A + B), E3 ligase, HECT domain, UBL- conjugation pathway; HET: MSE; 2.20A {Homo sapiens} PDB: 3jvz_C 3jw0_C 2xbf_A 2xbb_A
Probab=100.00 E-value=1.2e-77 Score=606.12 Aligned_cols=301 Identities=26% Similarity=0.502 Sum_probs=265.4
Q ss_pred CCCCCCCcchHHHHHHHHHHHhcCCCCcceeeCCCCCCCCCCCcceEEECCCCCCCCCchhhHHHHHHHHHHHHHhcCcc
Q psy16438 1 ESVDDAGGGYNECLSELCEELRDNSLLKVLIPTPNSNDENGSNRDKFILNPDPFAAAGSNDKLFFFLGILLGIAIRTGHY 80 (458)
Q Consensus 1 E~~~D~GG~~RE~~~~l~~el~~~p~~~lf~~~~n~~~~~g~~~~~~~~np~~~~~~~~~~~~f~f~G~llg~al~~~~~ 80 (458)
|+|+|+|||+||||++|++|++ +|.+|||.++++.. .+++|||.+....++|+++|+|+|+++|+||+++.+
T Consensus 80 E~G~D~GG~~rEff~ll~~el~-~p~~gLF~~~~~~~-------~~~~~np~s~~~~~~~l~~f~flG~lig~Al~~~~~ 151 (392)
T 2oni_A 80 EKGLDYGGVAREWFFLLSKEMF-NPYYGLFEYSATDN-------YTLQINPNSGLCNEDHLSYFTFIGRVAGLAVFHGKL 151 (392)
T ss_dssp CCSSCHHHHHHHHHHHHHHHHT-CGGGSSEEESSTTC-------CCEEECTTHHHHCTTHHHHHHHHHHHHHHHHHHTCC
T ss_pred CccccCCccHHHHHHHHHHHHc-CcccCCceecCCCC-------ceeccCCccccccHHHHHHHHhcchhhhhhhcCCcc
Confidence 8999999999999999999999 99999999876543 247899973223578999999999999999999999
Q ss_pred ccccccHHHHHHHcCCCCCccchhhhchhhHHHhhhcccCccccccccCCCccccccCCceEEecCCCcccccccchhhh
Q psy16438 81 LNLFLAEPIWTLLSGDILSLHDLMEIDQNFITVLSNMTQMPGEEVNALQMPFSTASSSNQFYVHLNPFENDITESNIRQY 160 (458)
Q Consensus 81 l~l~~~~~f~k~L~g~~~t~~DL~~~D~~~~~~l~~l~~~~~~~~~~l~l~F~~~~~s~~~~~~l~p~~~~v~~~n~~~y 160 (458)
++++|+++|||+|+|.+++++||.++|++++++|.+|++++. +.++++
T Consensus 152 ld~~f~~~f~K~llg~~~~l~Dl~~~Dp~l~~sL~~l~~~d~---~~l~L~----------------------------- 199 (392)
T 2oni_A 152 LDGFFIRPFYKMMLGKQITLNDMESVDSEYYNSLKWILENDP---TELDLM----------------------------- 199 (392)
T ss_dssp CSSCBCHHHHHHHTTCCCCTHHHHTTCHHHHHHHHHHHHSCC---GGGCCB-----------------------------
T ss_pred cCccchHHHHHHHhCCCCCHHHHHHhCHHHHHHHHHHhcCCh---hHceee-----------------------------
Confidence 999999999999999999999999999999998888876432 223444
Q ss_pred cccCcccccccchhhhhhhhhhhhcCccccccccHHHHHhhcCCCCCccchhhhhHHHHHHHHHhhcCCcccccccccce
Q psy16438 161 VVLPTTRYSKSCAFQGILLGIAIRTGHYLNLFLAEPIWTLLSGDILSLHDLMEIDQNFITVLSNMTQMPGEEVNALQMPF 240 (458)
Q Consensus 161 i~~p~~~~~~~~~~~G~lig~ai~~~~~l~l~~~~~~~k~llg~~~~~~Dl~~~d~~~~~sl~~l~~~~~~~~~~l~l~F 240 (458)
|
T Consensus 200 -------------------------------------------------------------------------------F 200 (392)
T 2oni_A 200 -------------------------------------------------------------------------------F 200 (392)
T ss_dssp -------------------------------------------------------------------------------S
T ss_pred -------------------------------------------------------------------------------E
Confidence 4
Q ss_pred EeecC--CCeeEEecCCC--CCCCChhhHHHHHHHHHHhHHHH-HHHHHHHHhcccccccccccccCCCHHHHhHhhccC
Q psy16438 241 STASS--SNQFYVHLNPF--ENDITESNIRQYVVLVLQFRLHE-FDERIHYVRKGLYQVIPVPLLHLFSGAEIETLVCST 315 (458)
Q Consensus 241 ~~~~~--~~~~~v~l~~~--~~~Vt~~N~~eyv~~~~~~~l~~-~~~~~~afr~Gf~~vip~~~l~~f~~~eL~~licG~ 315 (458)
+++.+ +...+++|+|+ +++||.+|+++||+++++|++++ ++.|++||++||++|+|.++|++|+|+||+.++||.
T Consensus 201 ~v~~~~~G~~~~veL~p~G~~i~VT~~N~~eYv~l~~~~~l~~~i~~q~~af~~Gf~~vip~~~L~~F~~~ELe~licG~ 280 (392)
T 2oni_A 201 CIDEENFGQTYQVDLKPNGSEIMVTNENKREYIDLVIQWRFVNRVQKQMNAFLEGFTELLPIDLIKIFDENELELLMCGL 280 (392)
T ss_dssp EEEEEETTEEEEEESSTTGGGCBCCTTTHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHSCHHHHTTSCHHHHHHHHHCC
T ss_pred EEeeecCCceeEEecCCCCccCccchhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccHHhhhcCCHHHHHHhhcCC
Confidence 44321 22335788876 78999999999999999999986 699999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHccCCCCCCCCCHHHHHHHHHHHhCCHHHHhhhceeccCCCCCCCCcccccCC-------ceEEEEecCC
Q psy16438 316 PEISIDVLKQVTFYKDEMNVTTPQIIWFWEVLEEMSNQDRVLFIRFVSGRSRLAKSAREFRGL-------KFEIQFLDRD 388 (458)
Q Consensus 316 ~~i~~~~l~~~~~y~~~~~~~~~~i~~fw~vl~~~s~e~r~~fL~FvTG~~rlP~~~~g~~~l-------~~~i~~~~~~ 388 (458)
++||+++|+++|.|.|+|++++++|+|||+|+++||++||++||+|||||+|+|++ ||+++ +|+|+..
T Consensus 281 ~~id~~dl~~~t~y~~gy~~~~~~i~~FW~vv~~~s~eer~~fL~FvTGs~rlP~~--Gf~~L~~~~gp~~f~I~~~--- 355 (392)
T 2oni_A 281 GDVDVNDWRQHSIYKNGYCPNHPVIQWFWKAVLLMDAEKRIRLLQFVTGTSRVPMN--GFAELYGSNGPQLFTIEQW--- 355 (392)
T ss_dssp CCCCHHHHHHTCEEETTCCTTCHHHHHHHHHHHHSCHHHHHHHHHHHHSCSCCCTT--CGGGCEETTEECCCEEEEC---
T ss_pred CCCCHHHHhcceEECCCCCCCCchheeHHHHHHhCCHHHHHHHHHHHhCCCCCCCc--chhhhcccCCCCceEEEeC---
Confidence 99999999999999998999999999999999999999999999999999999997 88876 4666543
Q ss_pred CCCCCCCceecccCCeeecCCCCCHHHHHHHHHHHHHh
Q psy16438 389 CDPDTLFPESSTCFFLLRLPRYTNKDTLKHKLVEAIHL 426 (458)
Q Consensus 389 ~~~~~~LP~a~TCf~~L~LP~Yss~e~l~~kL~~AI~~ 426 (458)
.++++||+||||||+|+||.|+|+|+||+||++||+|
T Consensus 356 -~~~~~LP~a~TCfn~L~LP~Yss~e~L~~kL~~AI~n 392 (392)
T 2oni_A 356 -GSPEKLPRAHTCFNRLDLPPYETFEDLREKLLMAVEN 392 (392)
T ss_dssp -SCTTSCCEEEGGGTEEEECCCSSHHHHHHHHHHHHC-
T ss_pred -CCCCcCcEEEcccCEeECCCCCCHHHHHHHHHHHHhC
Confidence 2457999999999999999999999999999999985
No 6
>3olm_A E3 ubiquitin-protein ligase RSP5; ligase; 2.50A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.3e-77 Score=606.28 Aligned_cols=308 Identities=25% Similarity=0.438 Sum_probs=259.7
Q ss_pred CCCCCCCcchHHHHHHHHHHHhcCCCCcceeeCCCCCCCCCCCcceEEECCCCCCCCCchhhHHHHHHHHHHHHHhcCcc
Q psy16438 1 ESVDDAGGGYNECLSELCEELRDNSLLKVLIPTPNSNDENGSNRDKFILNPDPFAAAGSNDKLFFFLGILLGIAIRTGHY 80 (458)
Q Consensus 1 E~~~D~GG~~RE~~~~l~~el~~~p~~~lf~~~~n~~~~~g~~~~~~~~np~~~~~~~~~~~~f~f~G~llg~al~~~~~ 80 (458)
|+|+|+|||+||||++|++||+ +|.+|||+.+++.. .++.|||.+ ...++|+++|+|+|++||+||+++.+
T Consensus 111 E~G~D~GG~~rEff~ll~~elf-~p~~gLF~~~~~~~-------~~~~~np~s-~~~~~~l~~f~flG~lig~Al~~~~~ 181 (429)
T 3olm_A 111 EEGLDYGGVSREFFFLLSHEMF-NPFYCLFEYSAYDN-------YTIQINPNS-GINPEHLNYFKFIGRVVGLGVFHRRF 181 (429)
T ss_dssp TC--------CHHHHHHHHHHT-CGGGSSEEESSSSS-------CCEEECGGG-GGSTTHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCccCCChhHHHHHHHHHHHHc-CccCCCceeeCCCC-------eeEeeCCcc-cCCHHHHHHHHHHHHHHHHHHhcCCc
Confidence 8999999999999999999999 99999999987543 247899974 45678999999999999999999999
Q ss_pred ccccccHHHHHHHcCCCCCccchhhhchhhHHHhhhcccCccccccccCCCccccccCCceEEecCCCcccccccchhhh
Q psy16438 81 LNLFLAEPIWTLLSGDILSLHDLMEIDQNFITVLSNMTQMPGEEVNALQMPFSTASSSNQFYVHLNPFENDITESNIRQY 160 (458)
Q Consensus 81 l~l~~~~~f~k~L~g~~~t~~DL~~~D~~~~~~l~~l~~~~~~~~~~l~l~F~~~~~s~~~~~~l~p~~~~v~~~n~~~y 160 (458)
++++|+++|||+|+|.+++++||.++|++++++|.+|.+++.+ +.++++|
T Consensus 182 ld~~f~~~f~k~Llg~~~~l~Dl~~~Dp~l~~sL~~ll~~d~~--~~l~l~F---------------------------- 231 (429)
T 3olm_A 182 LDAFFVGALYKMMLRKKVVLQDMEGVDAEVYNSLNWMLENSID--GVLDLTF---------------------------- 231 (429)
T ss_dssp CCCCBCHHHHHHHTTCCCCHHHHHHHCHHHHHHHHHHTTSCCT--TTCCCBS----------------------------
T ss_pred cCCCcCHHHHHhhcCCCCCHHHHHHHhHHHHHHHHHHHhCCHH--HhhcCce----------------------------
Confidence 9999999999999999999999999999999999888654311 1244444
Q ss_pred cccCcccccccchhhhhhhhhhhhcCccccccccHHHHHhhcCCCCCccchhhhhHHHHHHHHHhhcCCcccccccccce
Q psy16438 161 VVLPTTRYSKSCAFQGILLGIAIRTGHYLNLFLAEPIWTLLSGDILSLHDLMEIDQNFITVLSNMTQMPGEEVNALQMPF 240 (458)
Q Consensus 161 i~~p~~~~~~~~~~~G~lig~ai~~~~~l~l~~~~~~~k~llg~~~~~~Dl~~~d~~~~~sl~~l~~~~~~~~~~l~l~F 240 (458)
T Consensus 232 -------------------------------------------------------------------------------- 231 (429)
T 3olm_A 232 -------------------------------------------------------------------------------- 231 (429)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EeecC--CCeeEEecCCC--CCCCChhhHHHHHHHHHHhHHHH-HHHHHHHHhcccccccccccccCCCHHHHhHhhccC
Q psy16438 241 STASS--SNQFYVHLNPF--ENDITESNIRQYVVLVLQFRLHE-FDERIHYVRKGLYQVIPVPLLHLFSGAEIETLVCST 315 (458)
Q Consensus 241 ~~~~~--~~~~~v~l~~~--~~~Vt~~N~~eyv~~~~~~~l~~-~~~~~~afr~Gf~~vip~~~l~~f~~~eL~~licG~ 315 (458)
+++.+ +...+++|+|+ +++||.+||++||+++++|++++ ++.|++||++||++|+|.++|++|+|+||+.++||.
T Consensus 232 ~~~~~~~g~~~~veL~p~G~~i~VT~~Nk~eYV~l~~~~~l~~~v~~q~~aF~~Gf~~vip~~~L~~F~~~ELe~Li~G~ 311 (429)
T 3olm_A 232 SADDERFGEVVTVDLKPDGRNIEVTDGNKKEYVELYTQWRIVDRVQEQFKAFMDGFNELIPEDLVTVFDERELELLIGGI 311 (429)
T ss_dssp EEEEEETTEEEEEESSTTGGGSBCCTTTHHHHHHHHHHHHHTTTTHHHHHHHHHHHHTTSCHHHHTTSCHHHHHHHHTCB
T ss_pred EEEeccCCceeeEeccCCCcccccCchhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhcCCHHHHhcCCHHHHHHHhcCC
Confidence 43321 22345788876 78999999999999999999997 699999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHccCCCCCCCCCHHHHHHHHHHHhCCHHHHhhhceeccCCCCCCCCcccccCCce-----EEEEecCCCC
Q psy16438 316 PEISIDVLKQVTFYKDEMNVTTPQIIWFWEVLEEMSNQDRVLFIRFVSGRSRLAKSAREFRGLKF-----EIQFLDRDCD 390 (458)
Q Consensus 316 ~~i~~~~l~~~~~y~~~~~~~~~~i~~fw~vl~~~s~e~r~~fL~FvTG~~rlP~~~~g~~~l~~-----~i~~~~~~~~ 390 (458)
++||+++|+++|.|+|+ +.++++|+|||+|+++||++||++||+|||||+|+|++ ||+++++ ++++.. .+
T Consensus 312 ~~id~~dl~~~t~y~Gy-~~~~~~I~~FW~vv~~~s~eer~~fL~FvTGs~rlP~~--Gf~~L~~~~g~~~f~I~~-~~- 386 (429)
T 3olm_A 312 AEIDIEDWKKHTDYRGY-QESDEVIQWFWKCVSEWDNEQRARLLQFTTGTSRIPVN--GFKDLQGSDGPRRFTIEK-AG- 386 (429)
T ss_dssp CCCCHHHHHHTEEEESC-CTTSHHHHHHHHHHHHSCHHHHHHHHHHHHSCSCBCTT--CGGGCEETTEECCEEEEC-CS-
T ss_pred CCCCHHHHHHhccccCC-CCCchHHHHHHHHHHhCCHHHHHHHHhHhcCCCCCCCc--ccccccCcCCCceEEEee-CC-
Confidence 99999999999999875 99999999999999999999999999999999999996 8887742 233332 22
Q ss_pred CCCCCceecccCCeeecCCCCCHHHHHHHHHHHHHhCccccC
Q psy16438 391 PDTLFPESSTCFFLLRLPRYTNKDTLKHKLVEAIHLSKAINT 432 (458)
Q Consensus 391 ~~~~LP~a~TCf~~L~LP~Yss~e~l~~kL~~AI~~~~~f~~ 432 (458)
++++||+||||||+|+||.|+|+|+||+||++||++++||+.
T Consensus 387 ~~~~LP~A~TCfN~L~LP~Yss~e~L~ekL~~AI~~~~GFg~ 428 (429)
T 3olm_A 387 EVQQLPKSHTCFNRVDLPQYVDYDSMKQKLTLAVEETIGFGQ 428 (429)
T ss_dssp CTTSCCEEEGGGTEEECCCCSSHHHHHHHHHHHHHHTC----
T ss_pred CCCCCCccccccCEeECCCCCCHHHHHHHHHHHHHcCCCCCC
Confidence 468999999999999999999999999999999999999974
No 7
>3pt3_A E3 ubiquitin-protein ligase UBR5; EDD, HHYD, mixed alpha-beta fold, ubiquitin ligase; 1.97A {Homo sapiens}
Probab=100.00 E-value=5.5e-38 Score=261.34 Aligned_cols=112 Identities=29% Similarity=0.473 Sum_probs=77.4
Q ss_pred CCCCHHHHHHHccCCCCCCCCC----HHHHHHHHHHHhCCHHHHhhhceeccCCCCCCCCcccccCCceEEEEecCCCCC
Q psy16438 316 PEISIDVLKQVTFYKDEMNVTT----PQIIWFWEVLEEMSNQDRVLFIRFVSGRSRLAKSAREFRGLKFEIQFLDRDCDP 391 (458)
Q Consensus 316 ~~i~~~~l~~~~~y~~~~~~~~----~~i~~fw~vl~~~s~e~r~~fL~FvTG~~rlP~~~~g~~~l~~~i~~~~~~~~~ 391 (458)
|-||+++|++||.|.|+|..++ ++|+|||+|+++||++||++||+|||||+|+|++..||+++ ++|++.. .+
T Consensus 2 ~~~Dv~dLr~~T~Y~~~~~~~~~~~~~~i~wFW~vv~~~~~eer~~fL~FvTGs~rlP~~~~Gf~~l-~~~~i~~---~~ 77 (118)
T 3pt3_A 2 PLGSVQMLISFTSFNDESGENAEKLLQFKRWFWSIVEKMSMTERQDLVYFWTSSPSLPASEEGFQPM-PSITIRP---PD 77 (118)
T ss_dssp ----------CCEEEECSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHSCC-------------CEEEEES---CC
T ss_pred CccCHHHHHhhcEEcCCcCCCccccchHHHHHHHHHHHCCHHHHHHHHhHhcCCCCCCCcccCcccC-CcEEEEC---CC
Confidence 5699999999999999988877 99999999999999999999999999999999843488887 3455542 45
Q ss_pred CCCCceecccCCeeecCCCCCHHHHHHHHHHHHHhCccccC
Q psy16438 392 DTLFPESSTCFFLLRLPRYTNKDTLKHKLVEAIHLSKAINT 432 (458)
Q Consensus 392 ~~~LP~a~TCf~~L~LP~Yss~e~l~~kL~~AI~~~~~f~~ 432 (458)
+++||+||||||+|+||.|+|+|+||+||++||++ +||+.
T Consensus 78 ~~~LP~A~TCfn~L~LP~Y~s~e~L~~kL~~AI~~-~gfGf 117 (118)
T 3pt3_A 78 DQHLPTANTCISRLYVPLYSSKQILKQKLLLAIKT-KNFGF 117 (118)
T ss_dssp TTSCCEEETTTTEEEEECCSSHHHHHHHHHHHHC-------
T ss_pred CCCCccceehhceeECCCCCCHHHHHHHHHHHHHh-CCcCC
Confidence 78999999999999999999999999999999998 88863
No 8
>1c4z_A E6AP, ubiquitin-protein ligase E3A; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.148.1.1 PDB: 1d5f_A
Probab=99.41 E-value=9.1e-14 Score=138.47 Aligned_cols=92 Identities=22% Similarity=0.317 Sum_probs=74.5
Q ss_pred ccccccccCCCccccccCCceEEecCCCcccccccchhhhcccCcccccccchhhhhhhhhhhhcCccccccccHHHHHh
Q psy16438 121 PGEEVNALQMPFSTASSSNQFYVHLNPFENDITESNIRQYVVLPTTRYSKSCAFQGILLGIAIRTGHYLNLFLAEPIWTL 200 (458)
Q Consensus 121 ~~~~~~~l~l~F~~~~~s~~~~~~l~p~~~~v~~~n~~~yi~~p~~~~~~~~~~~G~lig~ai~~~~~l~l~~~~~~~k~ 200 (458)
..+.+++-...|.....++.+|+.|.+.. ..++|+|+|+++|+||+++.+++++|+++|||+
T Consensus 62 ~~el~~p~~glF~~~~~~~~~~~np~s~~------------------~~~~f~flG~lig~Al~~~~~ld~~f~~~f~k~ 123 (358)
T 1c4z_A 62 VEEIFNPDIGMFTYDESTKLFWFNPSSFE------------------TEGQFTLIGIVLGLAIYNNCILDVHFPMVVYRK 123 (358)
T ss_dssp HHHHTSGGGCSEEEETTTTEEEECTTCCS------------------CHHHHHHHHHHHHHHHHTTCCCCCCCCHHHHHH
T ss_pred HHHHcCCcCCceeecCCCCeEeeCCcccc------------------chHHHHhHHHHHHHHHHCCCCcCCcCCHHHHHH
Confidence 44556666667776554555554443321 235799999999999999999999999999999
Q ss_pred hcCCCCCccchhhhhHHHHHHHHHhhcCCc
Q psy16438 201 LSGDILSLHDLMEIDQNFITVLSNMTQMPG 230 (458)
Q Consensus 201 llg~~~~~~Dl~~~d~~~~~sl~~l~~~~~ 230 (458)
|+|.+++++||+++||+++++|++|+++++
T Consensus 124 llg~~~~l~Dl~~~Dp~l~~sL~~l~~~~~ 153 (358)
T 1c4z_A 124 LMGKKGTFRDLGDSHPVLYQSLKDLLEYEG 153 (358)
T ss_dssp HTTCCCCHHHHHHHSHHHHHHHHHHHHCCS
T ss_pred HhCCCCCHHHHHHhCHHHHHHHHHHHhcCC
Confidence 999999999999999999999999998764
No 9
>3h1d_A E3 ubiquitin-protein ligase HUWE1; E3ligase, HECT, LOBE, alternative splicing, chromosomal rearrangement, cytoplasm, differentiation; 1.89A {Homo sapiens} PDB: 3g1n_A
Probab=99.37 E-value=2.4e-13 Score=137.04 Aligned_cols=98 Identities=15% Similarity=0.239 Sum_probs=75.3
Q ss_pred ccccccccCCCccccccCCceEEecCCCcccccccchhhhcccCcccccccchhhhhhhhhhhhcCccccccccHHHHHh
Q psy16438 121 PGEEVNALQMPFSTASSSNQFYVHLNPFENDITESNIRQYVVLPTTRYSKSCAFQGILLGIAIRTGHYLNLFLAEPIWTL 200 (458)
Q Consensus 121 ~~~~~~~l~l~F~~~~~s~~~~~~l~p~~~~v~~~n~~~yi~~p~~~~~~~~~~~G~lig~ai~~~~~l~l~~~~~~~k~ 200 (458)
..+.+++....|..... +.+.+.+||.... +..+..+|+|+|++||+||+++.+++++|+++|||+
T Consensus 101 ~~elf~p~~gLF~~~~~-~~~~~~~np~s~~-------------~~~~l~~f~flGrliG~Al~~~~~ld~~F~~~f~K~ 166 (405)
T 3h1d_A 101 SREMFNPMYALFRTSPG-DRVTYTINPSSHA-------------NPNHLSYFKFVGRIVAKAVYDNRLLECYFTRSFYKH 166 (405)
T ss_dssp HHHTTCGGGTSEEECSS-CSSEEEECCC------------------CHHHHHHHHHHHHHHHHHHTCCCCCEECHHHHHH
T ss_pred HHHHhCCcccceeeccC-CceeEeeCCcccc-------------ChhHHHHHHHHhHHHHHHHhCCCccCCCccHHHHHH
Confidence 34556666677765432 2333345554321 123567899999999999999999999999999999
Q ss_pred hcCCCCCccchhhhhHHHHHHHHHhhcCCccc
Q psy16438 201 LSGDILSLHDLMEIDQNFITVLSNMTQMPGEE 232 (458)
Q Consensus 201 llg~~~~~~Dl~~~d~~~~~sl~~l~~~~~~~ 232 (458)
|+|.+++++||+++||+++++|++|++++.++
T Consensus 167 Llg~~~~l~DL~~~Dp~l~~sL~~ll~~~~~~ 198 (405)
T 3h1d_A 167 ILGKSVRYTDMESEDYHFYQGLVYLLENDVST 198 (405)
T ss_dssp HHTCCCCGGGHHHHCHHHHHHHHHHHHSCGGG
T ss_pred hcCCCCCHHHHHHhhHHHHHHHhhhhcCChhh
Confidence 99999999999999999999999999876443
No 10
>1zvd_A SMAD ubiquitination regulatory factor 2; ubiquitin ligasecatalytic mechanism,X-RAY ligase; 2.10A {Homo sapiens}
Probab=99.18 E-value=1.1e-11 Score=124.31 Aligned_cols=94 Identities=20% Similarity=0.332 Sum_probs=76.2
Q ss_pred ccccccccCCCccccccCCceEEecCCCcccccccchhhhcccCcccccccchhhhhhhhhhhhcCccccccccHHHHHh
Q psy16438 121 PGEEVNALQMPFSTASSSNQFYVHLNPFENDITESNIRQYVVLPTTRYSKSCAFQGILLGIAIRTGHYLNLFLAEPIWTL 200 (458)
Q Consensus 121 ~~~~~~~l~l~F~~~~~s~~~~~~l~p~~~~v~~~n~~~yi~~p~~~~~~~~~~~G~lig~ai~~~~~l~l~~~~~~~k~ 200 (458)
..+.+++....|... .++.+++.+||.... +..+.++|+|+|+++|+||+++.+++++|+++|||+
T Consensus 78 ~~el~~p~~gLF~~~-~~~~~~~~~np~s~~-------------~~~~l~~f~flG~l~g~al~~~~~ld~~f~~~f~k~ 143 (380)
T 1zvd_A 78 SHEMLNPYYGLFQYS-RDDIYTLQINPDSAV-------------NPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQ 143 (380)
T ss_dssp HHHHTSGGGSSEEEE-TTEEEEEEECTTGGG-------------STTHHHHHHHHHHHHHHHHHTTCCCCCCCCHHHHHH
T ss_pred HHHHcCCcCCCeecc-CCCCeeeccCchhhc-------------ChHHHHHHHHhHHHHHHHHhCCceeCCcCCHHHHHH
Confidence 445566666667643 344566777776431 123567899999999999999999999999999999
Q ss_pred hcCCCCCccchhhhhHHHHHHHHHhhcC
Q psy16438 201 LSGDILSLHDLMEIDQNFITVLSNMTQM 228 (458)
Q Consensus 201 llg~~~~~~Dl~~~d~~~~~sl~~l~~~ 228 (458)
|+|.+++++||+++||+++++|++|++.
T Consensus 144 llg~~~~l~Dl~~~Dp~l~~sL~~ll~~ 171 (380)
T 1zvd_A 144 LLGKSITLDDMELVDPDLHNSLVWILEN 171 (380)
T ss_dssp HTTCCCCSTTHHHHCHHHHHHHHHHHHS
T ss_pred HhCCCCCHHHHHHhCHHHHHHHHHHHhC
Confidence 9999999999999999999999999764
No 11
>1nd7_A WW domain-containing protein 1; HECT, ubiquitin, ligase, WWP1; 2.10A {Homo sapiens} SCOP: d.148.1.1 PDB: 3tug_A
Probab=99.16 E-value=9.5e-12 Score=124.70 Aligned_cols=99 Identities=22% Similarity=0.374 Sum_probs=78.2
Q ss_pred CccccccccCCCccccccCCceEEecCCCcccccccchhhhcccCcccccccchhhhhhhhhhhhcCccccccccHHHHH
Q psy16438 120 MPGEEVNALQMPFSTASSSNQFYVHLNPFENDITESNIRQYVVLPTTRYSKSCAFQGILLGIAIRTGHYLNLFLAEPIWT 199 (458)
Q Consensus 120 ~~~~~~~~l~l~F~~~~~s~~~~~~l~p~~~~v~~~n~~~yi~~p~~~~~~~~~~~G~lig~ai~~~~~l~l~~~~~~~k 199 (458)
+..+.+++....|.... ++.+++.++|... + +..+.++|+|+|++||+||+++.+++++|+++|||
T Consensus 76 l~~el~~p~~~lF~~~~-~~~~~~~~~p~s~-~------------~~~~l~~f~flG~lig~al~~~~~ld~~f~~~f~k 141 (374)
T 1nd7_A 76 LSHEVLNPMYCLFEYAG-KNNYCLQINPAST-I------------NPDHLSYFCFIGRFIAMALFHGKFIDTGFSLPFYK 141 (374)
T ss_dssp HHHHHTCGGGSSEEESS-SSSCCEEECGGGG-G------------STTHHHHHHHHHHHHHHHHHTTCCCCCCCCHHHHH
T ss_pred HHHHHcCCccccccccC-CCCceeccCCccc-C------------CHHHHHHHHHHHHHHHHHHhcCCeeCCcCCHHHHH
Confidence 34455666666776543 3344455565433 1 12356789999999999999999999999999999
Q ss_pred hhcCCCCCccchhhhhHHHHHHHHHhhcCCccc
Q psy16438 200 LLSGDILSLHDLMEIDQNFITVLSNMTQMPGEE 232 (458)
Q Consensus 200 ~llg~~~~~~Dl~~~d~~~~~sl~~l~~~~~~~ 232 (458)
+|+|.+++++||+++||+++++|++|++++.++
T Consensus 142 ~llg~~~~l~Dl~~~Dp~l~~sL~~l~~~~~~~ 174 (374)
T 1nd7_A 142 RMLSKKLTIKDLESIDTEFYNSLIWIRDNNIEE 174 (374)
T ss_dssp HHTTCCCCHHHHHTTCHHHHHHHHHHHSSCSCS
T ss_pred HHhCCCCCHHHHHHhhHHHHHhhhhhccCChhh
Confidence 999999999999999999999999999876554
No 12
>2oni_A E3 ubiquitin-protein ligase NEDD4-like protein; alpha and beta protein (A + B), E3 ligase, HECT domain, UBL- conjugation pathway; HET: MSE; 2.20A {Homo sapiens} PDB: 3jvz_C 3jw0_C 2xbf_A 2xbb_A
Probab=99.10 E-value=2.1e-11 Score=122.79 Aligned_cols=98 Identities=18% Similarity=0.363 Sum_probs=77.1
Q ss_pred CccccccccCCCccccccCCceEEecCCCcccccccchhhhcccCcccccccchhhhhhhhhhhhcCccccccccHHHHH
Q psy16438 120 MPGEEVNALQMPFSTASSSNQFYVHLNPFENDITESNIRQYVVLPTTRYSKSCAFQGILLGIAIRTGHYLNLFLAEPIWT 199 (458)
Q Consensus 120 ~~~~~~~~l~l~F~~~~~s~~~~~~l~p~~~~v~~~n~~~yi~~p~~~~~~~~~~~G~lig~ai~~~~~l~l~~~~~~~k 199 (458)
+..+.+++....|.... ++.+++.++|....++ ..+.++|+|+|+++|+||+++.+++++|+++|||
T Consensus 96 l~~el~~p~~gLF~~~~-~~~~~~~~np~s~~~~------------~~~l~~f~flG~lig~Al~~~~~ld~~f~~~f~K 162 (392)
T 2oni_A 96 LSKEMFNPYYGLFEYSA-TDNYTLQINPNSGLCN------------EDHLSYFTFIGRVAGLAVFHGKLLDGFFIRPFYK 162 (392)
T ss_dssp HHHHHTCGGGSSEEESS-TTCCCEEECTTHHHHC------------TTHHHHHHHHHHHHHHHHHHTCCCSSCBCHHHHH
T ss_pred HHHHHcCcccCCceecC-CCCceeccCCcccccc------------HHHHHHHHhcchhhhhhhcCCcccCccchHHHHH
Confidence 34455666666676432 3445556666543211 2356789999999999999999999999999999
Q ss_pred hhcCCCCCccchhhhhHHHHHHHHHhhcCCc
Q psy16438 200 LLSGDILSLHDLMEIDQNFITVLSNMTQMPG 230 (458)
Q Consensus 200 ~llg~~~~~~Dl~~~d~~~~~sl~~l~~~~~ 230 (458)
+|+|.+++++||+++||+++++|++|++++.
T Consensus 163 ~llg~~~~l~Dl~~~Dp~l~~sL~~l~~~d~ 193 (392)
T 2oni_A 163 MMLGKQITLNDMESVDSEYYNSLKWILENDP 193 (392)
T ss_dssp HHTTCCCCTHHHHTTCHHHHHHHHHHHHSCC
T ss_pred HHhCCCCCHHHHHHhCHHHHHHHHHHhcCCh
Confidence 9999999999999999999999999987543
No 13
>3olm_A E3 ubiquitin-protein ligase RSP5; ligase; 2.50A {Saccharomyces cerevisiae}
Probab=99.10 E-value=2.8e-11 Score=123.21 Aligned_cols=95 Identities=16% Similarity=0.321 Sum_probs=74.5
Q ss_pred ccccccccCCCccccccCCceEEecCCCcccccccchhhhcccCcccccccchhhhhhhhhhhhcCccccccccHHHHHh
Q psy16438 121 PGEEVNALQMPFSTASSSNQFYVHLNPFENDITESNIRQYVVLPTTRYSKSCAFQGILLGIAIRTGHYLNLFLAEPIWTL 200 (458)
Q Consensus 121 ~~~~~~~l~l~F~~~~~s~~~~~~l~p~~~~v~~~n~~~yi~~p~~~~~~~~~~~G~lig~ai~~~~~l~l~~~~~~~k~ 200 (458)
..+.+++....|.... ++.+.+.+||.... +..+.++|+|+|++||+||+++.+++++|+++|||+
T Consensus 128 ~~elf~p~~gLF~~~~-~~~~~~~~np~s~~-------------~~~~l~~f~flG~lig~Al~~~~~ld~~f~~~f~k~ 193 (429)
T 3olm_A 128 SHEMFNPFYCLFEYSA-YDNYTIQINPNSGI-------------NPEHLNYFKFIGRVVGLGVFHRRFLDAFFVGALYKM 193 (429)
T ss_dssp HHHHTCGGGSSEEESS-SSSCCEEECGGGGG-------------STTHHHHHHHHHHHHHHHHHTTCCCCCCBCHHHHHH
T ss_pred HHHHcCccCCCceeeC-CCCeeEeeCCcccC-------------CHHHHHHHHHHHHHHHHHHhcCCccCCCcCHHHHHh
Confidence 3455666666676443 23344455554321 123568899999999999999999999999999999
Q ss_pred hcCCCCCccchhhhhHHHHHHHHHhhcCC
Q psy16438 201 LSGDILSLHDLMEIDQNFITVLSNMTQMP 229 (458)
Q Consensus 201 llg~~~~~~Dl~~~d~~~~~sl~~l~~~~ 229 (458)
|+|.+++++||+++||+++++|++|++.+
T Consensus 194 Llg~~~~l~Dl~~~Dp~l~~sL~~ll~~d 222 (429)
T 3olm_A 194 MLRKKVVLQDMEGVDAEVYNSLNWMLENS 222 (429)
T ss_dssp HTTCCCCHHHHHHHCHHHHHHHHHHTTSC
T ss_pred hcCCCCCHHHHHHHhHHHHHHHHHHHhCC
Confidence 99999999999999999999999998753
No 14
>1l6x_B Minimized B-domain of protein A Z34C; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: k.13.1.1 PDB: 1oqo_C* 1oqx_C* 1zdc_A 1zdd_A
Probab=25.10 E-value=51 Score=20.14 Aligned_cols=23 Identities=22% Similarity=0.342 Sum_probs=18.9
Q ss_pred HHHHHHHHHHH--hCCHHHHhhhce
Q psy16438 338 PQIIWFWEVLE--EMSNQDRVLFIR 360 (458)
Q Consensus 338 ~~i~~fw~vl~--~~s~e~r~~fL~ 360 (458)
..-+.|.+||. .+|++||-.|++
T Consensus 4 ~qQnaFYevLh~~nLtEeQrn~yI~ 28 (34)
T 1l6x_B 4 QCQRRFYEALHDPNLNEEQRNAKIK 28 (34)
T ss_dssp HHHHHHHHHHHCTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCHHHHHhHHH
Confidence 45678999997 699999988765
Done!