BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16443
(412 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8BFR6|ZFAN1_MOUSE AN1-type zinc finger protein 1 OS=Mus musculus GN=Zfand1 PE=1 SV=1
Length = 268
Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 125/235 (53%), Gaps = 19/235 (8%)
Query: 168 LGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCTEYKDNVLLEKPTTTSIVSYK 227
+G+ C C+Q DFLPF CD C I+C EH + H C+E NV+ E+P T SY
Sbjct: 6 IGQHCQVQHCRQRDFLPFVCDGCSGIFCLEHRSKDSHGCSEV--NVVKERPKTDEHKSYS 63
Query: 228 CSESGCSTLDQVEMLCEQCKHHFCVGHRF---HACHQVETSRRKMLREQWKIPKEQFKQA 284
CS GC+ ++ V ++C C+ +FC+ HR H C ++E ++ +M Q K
Sbjct: 64 CSFKGCTDVELVAVICPYCEKNFCLRHRHQSDHDCEKLEVAKPRMAATQ--------KLV 115
Query: 285 KLIADKQIEEKLSKAEIQTENRPLALKLRLMKLKSKAVGDHRIPTADRVYFNIHAPKIEP 344
+ I D + SK ++ A K+ LMKLK A GD +P +R YF ++ PK
Sbjct: 116 RDIVDAKTGGAASKGRKGAKSSGTAAKVALMKLKMHADGDKSLPQTERTYFQVYLPK--- 172
Query: 345 SPGQEKCKPIYVSRDWSLGKVIDFAATKLKVVNENRNPGVSAKLRLFKT-SGEPI 398
+EK K ++ WS+GKV+DFAA+ + NEN N + KLRL SGE +
Sbjct: 173 -GSKEKSKAMFFCLRWSIGKVVDFAASLANLRNEN-NKLTAKKLRLCHVPSGEAL 225
>sp|Q8TCF1|ZFAN1_HUMAN AN1-type zinc finger protein 1 OS=Homo sapiens GN=ZFAND1 PE=1 SV=1
Length = 268
Score = 137 bits (346), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 122/235 (51%), Gaps = 19/235 (8%)
Query: 168 LGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCTEYKDNVLLEKPTTTSIVSYK 227
+G+ C C+Q DFLPF CD C I+C EH + H C E V+ E+ T SY
Sbjct: 6 IGQHCQVEHCRQRDFLPFVCDDCSGIFCLEHRSRESHGCPEV--TVINERLKTDQHTSYP 63
Query: 228 CSESGCSTLDQVEMLCEQCKHHFCVGHRF---HACHQVETSRRKMLREQWKIPKEQFKQA 284
CS C+ + V ++C C+ +FC+ HR H C ++E + +M Q K
Sbjct: 64 CSFKDCAERELVAVICPYCEKNFCLRHRHQSDHECEKLEIPKPRMAATQ--------KLV 115
Query: 285 KLIADKQIEEKLSKAEIQTENRPLALKLRLMKLKSKAVGDHRIPTADRVYFNIHAPKIEP 344
K I D + E SK +N A K+ LMKLK A GD +P +R+YF + PK
Sbjct: 116 KDIIDSKTGETASKRWKGAKNSETAAKVALMKLKMHADGDKSLPQTERIYFQVFLPK--- 172
Query: 345 SPGQEKCKPIYVSRDWSLGKVIDFAATKLKVVNENRNPGVSAKLRLFK-TSGEPI 398
+EK KP++ WS+GK IDFAA+ ++ N+N N + KLRL TSGE +
Sbjct: 173 -GSKEKSKPMFFCHRWSIGKAIDFAASLARLKNDN-NKFTAKKLRLCHITSGEAL 225
>sp|Q5RBV4|APC13_PONAB Anaphase-promoting complex subunit 13 OS=Pongo abelii GN=ANAPC13
PE=3 SV=1
Length = 74
Score = 91.3 bits (225), Expect = 1e-17, Method: Composition-based stats.
Identities = 38/65 (58%), Positives = 53/65 (81%)
Query: 84 MDSQVQSQGRLLDIVDNEWKEDKLPSDDISVPQNELPDPDSDNGDSHLTLREQESKWTDL 143
MDS+VQ GR+LD++D+ W+EDKLP +D+++P NELPDP+ DNG + +++EQE KWTDL
Sbjct: 1 MDSEVQRDGRILDLIDDAWREDKLPYEDVAIPLNELPDPEQDNGGTTESVKEQEMKWTDL 60
Query: 144 ALSQL 148
AL L
Sbjct: 61 ALQYL 65
>sp|Q9BS18|APC13_HUMAN Anaphase-promoting complex subunit 13 OS=Homo sapiens GN=ANAPC13
PE=1 SV=1
Length = 74
Score = 89.4 bits (220), Expect = 5e-17, Method: Composition-based stats.
Identities = 37/65 (56%), Positives = 53/65 (81%)
Query: 84 MDSQVQSQGRLLDIVDNEWKEDKLPSDDISVPQNELPDPDSDNGDSHLTLREQESKWTDL 143
MDS+VQ GR+LD++D+ W+EDKLP +D+++P NELP+P+ DNG + +++EQE KWTDL
Sbjct: 1 MDSEVQRDGRILDLIDDAWREDKLPYEDVAIPLNELPEPEQDNGGTTESVKEQEMKWTDL 60
Query: 144 ALSQL 148
AL L
Sbjct: 61 ALQYL 65
>sp|Q2NKV2|APC13_BOVIN Anaphase-promoting complex subunit 13 OS=Bos taurus GN=ANAPC13 PE=3
SV=1
Length = 74
Score = 89.4 bits (220), Expect = 5e-17, Method: Composition-based stats.
Identities = 37/65 (56%), Positives = 53/65 (81%)
Query: 84 MDSQVQSQGRLLDIVDNEWKEDKLPSDDISVPQNELPDPDSDNGDSHLTLREQESKWTDL 143
MDS+VQ GR+LD++D+ W+EDKLP +D+++P NELP+P+ DNG + +++EQE KWTDL
Sbjct: 1 MDSEVQRDGRILDLIDDAWREDKLPYEDVAIPLNELPEPEQDNGGTTESVKEQEMKWTDL 60
Query: 144 ALSQL 148
AL L
Sbjct: 61 ALQYL 65
>sp|Q8R034|APC13_MOUSE Anaphase-promoting complex subunit 13 OS=Mus musculus GN=Anapc13
PE=2 SV=1
Length = 74
Score = 87.4 bits (215), Expect = 2e-16, Method: Composition-based stats.
Identities = 36/65 (55%), Positives = 53/65 (81%)
Query: 84 MDSQVQSQGRLLDIVDNEWKEDKLPSDDISVPQNELPDPDSDNGDSHLTLREQESKWTDL 143
MDS+VQ GR+LD++D+ W+EDKLP +D+++P +ELP+P+ DNG + +++EQE KWTDL
Sbjct: 1 MDSEVQRDGRILDLIDDAWREDKLPYEDVAIPLSELPEPEQDNGGTTESVKEQEMKWTDL 60
Query: 144 ALSQL 148
AL L
Sbjct: 61 ALQGL 65
>sp|Q28IW8|APC13_XENTR Anaphase-promoting complex subunit 13 OS=Xenopus tropicalis
GN=anapc13 PE=3 SV=1
Length = 74
Score = 85.5 bits (210), Expect = 7e-16, Method: Composition-based stats.
Identities = 35/65 (53%), Positives = 51/65 (78%)
Query: 84 MDSQVQSQGRLLDIVDNEWKEDKLPSDDISVPQNELPDPDSDNGDSHLTLREQESKWTDL 143
MDS+V GR+LD++D+ W+EDKLP +D+++P NELP+P+ DNG + +++EQE KW DL
Sbjct: 1 MDSEVLRDGRILDLIDDAWREDKLPYEDVTIPLNELPEPEQDNGGATESVKEQEMKWADL 60
Query: 144 ALSQL 148
AL L
Sbjct: 61 ALQYL 65
>sp|Q9JII7|ZFN2A_MOUSE AN1-type zinc finger protein 2A OS=Mus musculus GN=Zfand2a PE=2
SV=1
Length = 171
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 59/127 (46%), Gaps = 34/127 (26%)
Query: 163 MELPQLGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCT-EYKDNV------LL 215
ME P LGK C EPTCKQLDFLP CD CK +CK+H + V H C +K +V L
Sbjct: 1 MEFPDLGKHCSEPTCKQLDFLPITCDACKQDFCKDHFSYVGHKCPFAFKKDVQVPVCPLC 60
Query: 216 EKP---------------------------TTTSIVSYKCSESGCSTLDQVEMLCEQCKH 248
P + +++CS+ GC + +++ C QC
Sbjct: 61 NAPIPVKRGEIPDVVVGEHMDRDCTFHPGRNRNKVFTHRCSKEGCRKKEMLQLACAQCHG 120
Query: 249 HFCVGHR 255
+FC+ HR
Sbjct: 121 NFCIQHR 127
Score = 33.1 bits (74), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 171 QCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCTEYKDNVLLEKPTTTSIVSYKCSE 230
+C + C++ + L C C +C +H +P+ HNC + + +T+ K
Sbjct: 99 RCSKEGCRKKEMLQLACAQCHGNFCIQHRHPLDHNCQAGSSSASRGRTSTSRAAEQK--P 156
Query: 231 SGCSTLDQ 238
SG S L Q
Sbjct: 157 SGVSWLAQ 164
>sp|Q5R966|ZFN2A_PONAB AN1-type zinc finger protein 2A OS=Pongo abelii GN=ZFAND2A PE=3
SV=1
Length = 194
Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 61/143 (42%), Gaps = 34/143 (23%)
Query: 163 MELPQLGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCT-EYKDNV------LL 215
ME P LGK C E TCKQLDFLP +CD CK +CK+H H C ++ +V L
Sbjct: 1 MEFPDLGKHCSEKTCKQLDFLPVKCDACKQDFCKDHFTYAAHKCPFAFQKDVHVPVCPLC 60
Query: 216 EKPTTT---------------------------SIVSYKCSESGCSTLDQVEMLCEQCKH 248
P I +Y+CS+ GC + ++M C QC
Sbjct: 61 NTPIPVKKGQIPDVVVGDHIDRDCDSHPGKKKEKIFTYRCSKEGCKKKEMLQMSCAQCHG 120
Query: 249 HFCVGHRFHACHQVETSRRKMLR 271
+FC+ HR H R ++
Sbjct: 121 NFCIQHRHPLDHSCRHGSRPTIK 143
>sp|Q91X58|ZFN2B_MOUSE AN1-type zinc finger protein 2B OS=Mus musculus GN=Zfand2b PE=1
SV=1
Length = 257
Score = 75.5 bits (184), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 34/127 (26%)
Query: 163 MELPQLGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNC-TEYKDNV------LL 215
ME P LG C EP+C++LDFLP +CD C I+C +H+ QH+C + Y+ ++ L
Sbjct: 1 MEFPDLGAHCSEPSCQRLDFLPLKCDACSGIFCADHVAYAQHHCGSAYQKDIQVPVCPLC 60
Query: 216 EKPTTTS---------------------------IVSYKCSESGCSTLDQVEMLCEQCKH 248
P + I + KC SGC + +++ C++C
Sbjct: 61 NVPVPVARGEPPDRAVGEHIDRDCRSDPAQQKRKIFTNKCERSGCRQREMMKLTCDRCGR 120
Query: 249 HFCVGHR 255
+FC+ HR
Sbjct: 121 NFCIKHR 127
Score = 32.7 bits (73), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 171 QCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCT 207
+C C+Q + + CD C +C +H +P+ H C+
Sbjct: 99 KCERSGCRQREMMKLTCDRCGRNFCIKHRHPLDHECS 135
>sp|Q8WV99|ZFN2B_HUMAN AN1-type zinc finger protein 2B OS=Homo sapiens GN=ZFAND2B PE=1
SV=1
Length = 257
Score = 75.1 bits (183), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 34/127 (26%)
Query: 163 MELPQLGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNC-TEYKDNV------LL 215
ME P LG C EP+C++LDFLP +CD C I+C +H+ QH+C + Y+ ++ L
Sbjct: 1 MEFPDLGAHCSEPSCQRLDFLPLKCDACSGIFCADHVAYAQHHCGSAYQKDIQVPVCPLC 60
Query: 216 EKPTTTS---------------------------IVSYKCSESGCSTLDQVEMLCEQCKH 248
P + I + KC +GC + +++ CE+C
Sbjct: 61 NVPVPVARGEPPDRAVGEHIDRDCRSDPAQQKRKIFTNKCERAGCRQREMMKLTCERCSR 120
Query: 249 HFCVGHR 255
+FC+ HR
Sbjct: 121 NFCIKHR 127
>sp|Q5U2P3|ZFN2A_RAT AN1-type zinc finger protein 2A OS=Rattus norvegicus GN=Zfand2a
PE=2 SV=1
Length = 171
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 58/127 (45%), Gaps = 34/127 (26%)
Query: 163 MELPQLGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCT-EYKDNV------LL 215
ME P LGK C EPTCKQLDFLP CD CK +CK+H + H C +K +V L
Sbjct: 1 MEFPDLGKHCSEPTCKQLDFLPITCDACKQDFCKDHFSYSGHKCPFAFKKDVQVPVCPLC 60
Query: 216 EKP---------------------------TTTSIVSYKCSESGCSTLDQVEMLCEQCKH 248
P + +++CS+ GC + +++ C QC
Sbjct: 61 NAPIPVRRGDIPDVVVGEHMDRDCTFHPGRNRNKVFTHRCSKEGCRKKEMLQLACAQCHG 120
Query: 249 HFCVGHR 255
+FC+ HR
Sbjct: 121 NFCIQHR 127
>sp|Q8N6M9|ZFN2A_HUMAN AN1-type zinc finger protein 2A OS=Homo sapiens GN=ZFAND2A PE=2
SV=2
Length = 145
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 65/147 (44%), Gaps = 38/147 (25%)
Query: 163 MELPQLGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCT-EYKDNV------LL 215
ME P LGK C E TCKQLDFLP +CD CK +CK+H H C ++ +V L
Sbjct: 1 MEFPDLGKHCSEKTCKQLDFLPVKCDACKQDFCKDHFPYAAHKCPFAFQKDVHVPVCPLC 60
Query: 216 EKPTTT---------------------------SIVSYKCSESGCSTLDQVEMLCEQCKH 248
P I +Y+CS+ GC + ++M+C QC
Sbjct: 61 NTPIPVKKGQIPDVVVGDHIDRDCDSHPGKKKEKIFTYRCSKEGCKKKEMLQMVCAQCHG 120
Query: 249 HFCVGHRFHACHQVETSRRKMLREQWK 275
+FC+ HR H ++ S R R K
Sbjct: 121 NFCIQHR----HPLDHSCRHGSRPTIK 143
>sp|Q4KLG9|ZFN2B_RAT AN1-type zinc finger protein 2B OS=Rattus norvegicus GN=Zfand2b
PE=2 SV=1
Length = 257
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 34/127 (26%)
Query: 163 MELPQLGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNC-TEYKDNV------LL 215
ME P LG C EP+C++LDFLP +CD C I+C +H+ H+C + Y+ ++ L
Sbjct: 1 MEFPDLGAHCSEPSCQRLDFLPLKCDACSGIFCADHVAYAHHHCGSAYQKDIQVPVCPLC 60
Query: 216 EKPTTTS---------------------------IVSYKCSESGCSTLDQVEMLCEQCKH 248
P + I + KC SGC + +++ C++C
Sbjct: 61 NVPVPVARGEPPDRAVGEHIDRDCRSDPAQQKRKIFTNKCERSGCRQREMMKLTCDRCGR 120
Query: 249 HFCVGHR 255
+FC+ HR
Sbjct: 121 NFCIKHR 127
Score = 33.1 bits (74), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 171 QCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCT 207
+C C+Q + + CD C +C +H +P+ H+C+
Sbjct: 99 KCERSGCRQREMMKLTCDRCGRNFCIKHRHPLDHDCS 135
>sp|Q55GW8|Y8260_DICDI AN1-type zinc finger and UBX domain-containing protein DDB_G0268260
OS=Dictyostelium discoideum GN=DDB_G0268260 PE=4 SV=2
Length = 391
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 58/135 (42%), Gaps = 39/135 (28%)
Query: 164 ELPQLGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNC--TEYKDNVLLEK-PTT 220
+L +G C C+ LDFLPF CDLC +C EH H C E ++N ++ P
Sbjct: 24 QLDHIGVHCNVTDCRVLDFLPFNCDLCNLSFCMEHKGYENHKCKNIEQRENKIVHPCPVC 83
Query: 221 TSIV---------------------------------SYKCSESGCSTLDQVEMLCEQCK 247
++ S+KCS C T + VE+ C++CK
Sbjct: 84 NCLIKVDSLANLDQTVRFIISVHMDTDCKFNQSKAPKSFKCSLKTCKTSEFVEVKCDKCK 143
Query: 248 HHFCVGHRF---HAC 259
++C+ HRF H+C
Sbjct: 144 SNYCLKHRFPTNHSC 158
Score = 39.3 bits (90), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 171 QCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCT 207
+C TCK +F+ +CD CK+ YC +H P H+CT
Sbjct: 123 KCSLKTCKTSEFVEVKCDKCKSNYCLKHRFPTNHSCT 159
>sp|Q9SCM4|SAP13_ARATH Zinc finger AN1 and C2H2 domain-containing stress-associated
protein 13 OS=Arabidopsis thaliana GN=SAP13 PE=2 SV=1
Length = 249
Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%)
Query: 164 ELPQLGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNC 206
E P LGK C CKQ+DFLPF CD C +YC +H + ++H+C
Sbjct: 5 EFPDLGKHCSVDYCKQIDFLPFTCDRCLQVYCLDHRSYMKHDC 47
>sp|Q67YE6|SAP12_ARATH Zinc finger AN1 domain-containing stress-associated protein 12
OS=Arabidopsis thaliana GN=SAP12 PE=2 SV=2
Length = 186
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 165 LPQLGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNC 206
P LG+ C +P CK LDFLPF CD CK ++C EH + HNC
Sbjct: 9 FPDLGEHCQDPDCKLLDFLPFTCDGCKLVFCLEHRSYKSHNC 50
>sp|Q8VZ42|SAP11_ARATH Zinc finger AN1 and C2H2 domain-containing stress-associated
protein 11 OS=Arabidopsis thaliana GN=SAP11 PE=2 SV=1
Length = 279
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 164 ELPQLGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNC 206
E P LGK C CKQ+DFLPF CD C ++C +H + ++H+C
Sbjct: 5 EFPDLGKHCSVDVCKQIDFLPFTCDRCLQVFCLDHRSYMKHSC 47
>sp|Q6H595|SAP17_ORYSJ Zinc finger AN1 domain-containing stress-associated protein 17
OS=Oryza sativa subsp. japonica GN=SAP17 PE=2 SV=1
Length = 188
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 29/67 (43%), Gaps = 6/67 (8%)
Query: 165 LPQLGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCTEYKDNVLLEKPTTTSIV 224
P LG QC C QLDFLPF CD C +C EH H C D T +V
Sbjct: 9 FPDLGAQCDREDCNQLDFLPFDCDGCGKTFCAEHRTYRDHGCARAADQ------GRTVVV 62
Query: 225 SYKCSES 231
C ++
Sbjct: 63 CEACGDA 69
>sp|Q0D5B9|SAP16_ORYSJ Zinc finger AN1 and C2H2 domain-containing stress-associated
protein 16 OS=Oryza sativa subsp. japonica GN=SAP16 PE=2
SV=2
Length = 290
Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 164 ELPQLGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNC 206
E P LGK C C Q+DFLPF CD C +++C +H + H C
Sbjct: 5 EFPNLGKHCSVGDCNQIDFLPFTCDRCDHVFCLQHRSYTSHQC 47
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 228 CSESGCSTLDQVEMLCEQCKHHFCVGHRFHACHQVETSRRK 268
CS C+ +D + C++C H FC+ HR + HQ + +K
Sbjct: 13 CSVGDCNQIDFLPFTCDRCDHVFCLQHRSYTSHQCPNANQK 53
>sp|Q55BU1|ZFAND_DICDI AN1-type zinc finger protein OS=Dictyostelium discoideum GN=zfand
PE=2 SV=1
Length = 165
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 32/130 (24%)
Query: 164 ELPQLGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCTE--------------- 208
+L ++G C C LDFLPF C C+ +C EH +H C
Sbjct: 6 DLDKVGVHCAIKDCNLLDFLPFICQGCQGQFCLEHKEEKEHKCPTPIVKIGGTTVTCDKC 65
Query: 209 ----------YKDNVL---LEK--PTTTSIVSYKCSESGCSTLDQVEMLCEQCKHHFCVG 253
++ ++L L K P T++ +KC S C ++ ++++C CK++FC+
Sbjct: 66 ESILPVPVNCFEKDILSMHLRKGCPKKTTVNQHKC--SFCPKMESIKIVCPNCKNNFCIK 123
Query: 254 HRFHACHQVE 263
HRF H+ +
Sbjct: 124 HRFERDHKCK 133
>sp|P53899|YNP5_YEAST AN1-type zinc finger protein YNL155W OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YNL155W PE=1 SV=1
Length = 274
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 168 LGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNC 206
+GK C C+QLDFLPF C C +C H H+C
Sbjct: 14 VGKHCA--YCRQLDFLPFHCSFCNEDFCSNHRLKEDHHC 50
Score = 37.0 bits (84), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 312 LRLMKLKSKAVGDHRIPTADRVYFNIH-APKIEPSPGQEKCK-PIYVSRDWSLGKVIDFA 369
++L LK A GD +IP +R+Y + E +E + P+Y+++ W +G+ +D+
Sbjct: 151 IQLANLKKIAKGDPKIPMQNRIYIWCYLVDGDETDIAKEDTRMPLYINKMWPVGRAMDYL 210
Query: 370 ATKLKV 375
+ +L V
Sbjct: 211 SIQLNV 216
>sp|P53303|ZPR1_YEAST Zinc finger protein ZPR1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=ZPR1 PE=1 SV=1
Length = 486
Score = 33.1 bits (74), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Query: 19 VKREGRQDRKKPPVLRINLICLGSANLALTRLLSISLIYITRLAIILLDFNDLELTSCFS 78
VK G QD PV I +C+ TRLL S+ Y + I+ D +C
Sbjct: 34 VKLTGAQDAMGHPVQEIESLCMNCGKNGTTRLLLTSIPYFREIIIMSFDCPHCGFKNC-- 91
Query: 79 YATILMDSQVQSQG 92
I SQ+Q +G
Sbjct: 92 --EIQPASQIQEKG 103
>sp|A6LMU8|END4_THEM4 Probable endonuclease 4 OS=Thermosipho melanesiensis (strain BI429
/ DSM 12029) GN=nfo PE=3 SV=1
Length = 283
Score = 32.7 bits (73), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Query: 178 KQLDFLPFQCDLCK-------NIYCKEHMNP-VQHNCTEYKD--NVLLEKPTTTSIVSYK 227
K L+ L + ++CK NI+ H+N V+ + N+ +EK T I+
Sbjct: 86 KSLELLILEMNICKTLGIRYLNIHPGSHLNSGVEKGINQIVKALNIAMEKEKETFILLEN 145
Query: 228 CSESGC---STLDQVEMLCEQCKHHFCVGHRFHACHQVETS 265
++ G STL++++M+ E K+ +G CH +
Sbjct: 146 VTKKGGNIGSTLEELKMIIEMVKYPERIGITIDTCHAFDAG 186
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 153,254,112
Number of Sequences: 539616
Number of extensions: 6320114
Number of successful extensions: 16489
Number of sequences better than 100.0: 39
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 16413
Number of HSP's gapped (non-prelim): 75
length of query: 412
length of database: 191,569,459
effective HSP length: 120
effective length of query: 292
effective length of database: 126,815,539
effective search space: 37030137388
effective search space used: 37030137388
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)