Query psy1645
Match_columns 143
No_of_seqs 148 out of 284
Neff 4.7
Searched_HMMs 29240
Date Fri Aug 16 21:38:22 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1645.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1645hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lvg_A Clathrin heavy chain 1; 100.0 9.5E-46 3.2E-50 331.8 -7.4 128 13-142 17-147 (624)
2 1xi4_A Clathrin heavy chain; a 100.0 6.5E-33 2.2E-37 269.3 12.3 103 40-142 1096-1198(1630)
3 1b89_A Protein (clathrin heavy 99.9 9.7E-27 3.3E-31 204.3 0.2 120 21-142 3-125 (449)
4 1xi4_A Clathrin heavy chain; a 98.6 1.1E-07 3.9E-12 93.6 8.8 123 3-138 869-1048(1630)
5 3mkq_B Coatomer subunit alpha; 97.2 0.0021 7E-08 50.2 9.1 89 38-134 23-137 (177)
6 2xpi_A Anaphase-promoting comp 97.0 0.018 6.1E-07 47.3 13.4 130 5-134 371-539 (597)
7 3vtx_A MAMA; tetratricopeptide 97.0 0.045 1.6E-06 38.2 13.9 130 4-133 2-163 (184)
8 3mkq_A Coatomer beta'-subunit; 97.0 0.011 3.6E-07 50.8 12.0 96 35-137 667-762 (814)
9 2xpi_A Anaphase-promoting comp 96.9 0.013 4.5E-07 48.1 12.0 131 5-135 337-499 (597)
10 4eqf_A PEX5-related protein; a 96.9 0.025 8.4E-07 43.7 12.8 122 6-136 212-352 (365)
11 3cv0_A Peroxisome targeting si 96.9 0.04 1.4E-06 40.9 13.3 121 6-135 171-310 (327)
12 1fch_A Peroxisomal targeting s 96.9 0.022 7.6E-07 43.5 12.2 121 6-135 216-354 (368)
13 2q7f_A YRRB protein; TPR, prot 96.8 0.038 1.3E-06 39.5 12.1 130 5-134 55-216 (243)
14 3as5_A MAMA; tetratricopeptide 96.6 0.077 2.6E-06 35.7 13.2 88 47-134 74-167 (186)
15 2fo7_A Synthetic consensus TPR 96.6 0.058 2E-06 34.1 13.1 118 9-135 3-127 (136)
16 3uq3_A Heat shock protein STI1 96.5 0.037 1.3E-06 39.6 10.4 92 5-106 3-107 (258)
17 2ho1_A Type 4 fimbrial biogene 96.5 0.071 2.4E-06 38.6 12.1 129 6-134 70-232 (252)
18 2q7f_A YRRB protein; TPR, prot 96.5 0.12 4.1E-06 36.7 13.0 88 47-134 89-182 (243)
19 2vq2_A PILW, putative fimbrial 96.5 0.043 1.5E-06 38.4 10.4 86 49-134 113-205 (225)
20 2pl2_A Hypothetical conserved 96.4 0.17 5.6E-06 37.3 14.2 67 63-129 98-169 (217)
21 2pl2_A Hypothetical conserved 96.4 0.026 8.9E-07 41.7 9.5 122 6-137 72-211 (217)
22 2vq2_A PILW, putative fimbrial 96.4 0.098 3.4E-06 36.5 11.9 86 48-133 75-169 (225)
23 3hym_B Cell division cycle pro 96.3 0.13 4.4E-06 38.1 12.8 87 48-134 158-259 (330)
24 3as5_A MAMA; tetratricopeptide 96.3 0.13 4.4E-06 34.5 12.6 120 7-134 8-133 (186)
25 2vyi_A SGTA protein; chaperone 96.3 0.099 3.4E-06 33.1 12.8 113 6-127 11-130 (131)
26 1fch_A Peroxisomal targeting s 96.3 0.13 4.4E-06 39.1 12.8 87 48-134 216-308 (368)
27 2y4t_A DNAJ homolog subfamily 96.3 0.098 3.3E-06 41.1 12.4 23 5-27 175-197 (450)
28 3gyz_A Chaperone protein IPGC; 96.2 0.083 2.8E-06 38.2 11.2 98 6-112 35-138 (151)
29 3vtx_A MAMA; tetratricopeptide 96.2 0.062 2.1E-06 37.5 10.1 84 47-130 37-126 (184)
30 4eqf_A PEX5-related protein; a 96.2 0.12 3.9E-06 39.9 12.4 87 48-134 212-304 (365)
31 1elr_A TPR2A-domain of HOP; HO 96.2 0.06 2.1E-06 34.3 9.2 110 6-124 3-125 (131)
32 2ho1_A Type 4 fimbrial biogene 96.2 0.18 6.3E-06 36.3 12.7 128 7-134 37-198 (252)
33 1w3b_A UDP-N-acetylglucosamine 96.1 0.13 4.5E-06 40.0 12.5 88 47-134 269-362 (388)
34 3uq3_A Heat shock protein STI1 96.1 0.22 7.5E-06 35.5 13.5 128 7-134 79-230 (258)
35 1xnf_A Lipoprotein NLPI; TPR, 96.0 0.27 9.2E-06 35.6 12.9 94 6-108 42-141 (275)
36 1w3b_A UDP-N-acetylglucosamine 96.0 0.17 5.8E-06 39.4 12.5 130 5-134 167-328 (388)
37 3ieg_A DNAJ homolog subfamily 96.0 0.21 7.3E-06 37.2 12.5 87 48-134 70-177 (359)
38 2lni_A Stress-induced-phosphop 96.0 0.16 5.5E-06 32.5 13.7 113 5-125 14-132 (133)
39 2kck_A TPR repeat; tetratricop 95.9 0.077 2.6E-06 32.9 8.4 89 47-135 4-101 (112)
40 1ouv_A Conserved hypothetical 95.7 0.4 1.4E-05 35.5 13.2 85 45-130 106-205 (273)
41 4i17_A Hypothetical protein; T 95.7 0.38 1.3E-05 34.6 12.8 122 4-133 4-139 (228)
42 1b89_A Protein (clathrin heavy 95.6 0.031 1E-06 49.0 7.6 78 50-130 149-226 (449)
43 3edt_B KLC 2, kinesin light ch 95.6 0.21 7E-06 35.9 10.8 122 7-134 43-192 (283)
44 1ouv_A Conserved hypothetical 95.6 0.48 1.6E-05 35.1 13.4 127 6-133 5-172 (273)
45 1hh8_A P67PHOX, NCF-2, neutrop 95.6 0.38 1.3E-05 33.9 13.1 117 7-134 6-144 (213)
46 2vsy_A XCC0866; transferase, g 95.6 0.37 1.3E-05 40.4 13.7 122 5-134 21-151 (568)
47 1na0_A Designed protein CTPR3; 95.5 0.22 7.7E-06 31.1 11.6 107 7-122 9-122 (125)
48 3sz7_A HSC70 cochaperone (SGT) 95.5 0.32 1.1E-05 33.6 11.2 112 5-125 9-129 (164)
49 3fp2_A TPR repeat-containing p 95.4 0.29 1E-05 39.2 12.1 88 47-134 308-401 (537)
50 3nf1_A KLC 1, kinesin light ch 95.4 0.3 1E-05 35.8 11.3 122 7-134 27-176 (311)
51 1elw_A TPR1-domain of HOP; HOP 95.4 0.22 7.7E-06 30.9 9.3 83 49-131 4-92 (118)
52 1elr_A TPR2A-domain of HOP; HO 95.4 0.21 7.1E-06 31.7 9.2 87 48-134 3-102 (131)
53 3q49_B STIP1 homology and U bo 95.4 0.32 1.1E-05 31.8 11.9 111 4-123 6-128 (137)
54 2gw1_A Mitochondrial precursor 95.4 0.35 1.2E-05 38.3 12.3 87 48-134 337-438 (514)
55 3hym_B Cell division cycle pro 95.3 0.58 2E-05 34.5 14.1 88 47-134 123-216 (330)
56 2vgx_A Chaperone SYCD; alterna 95.3 0.47 1.6E-05 33.1 13.2 94 6-108 20-119 (148)
57 3ro2_A PINS homolog, G-protein 95.1 0.35 1.2E-05 35.3 10.8 121 8-134 184-326 (338)
58 4gyw_A UDP-N-acetylglucosamine 95.1 0.4 1.4E-05 43.4 13.3 128 6-133 8-167 (723)
59 3ro3_A PINS homolog, G-protein 95.0 0.4 1.4E-05 31.1 10.6 122 7-134 9-152 (164)
60 3sf4_A G-protein-signaling mod 95.0 0.34 1.2E-05 37.0 10.9 121 8-134 188-330 (406)
61 3cv0_A Peroxisome targeting si 95.0 0.72 2.5E-05 34.0 13.7 88 47-134 170-263 (327)
62 3u4t_A TPR repeat-containing p 95.0 0.5 1.7E-05 34.3 11.4 119 7-134 3-131 (272)
63 3mkr_A Coatomer subunit epsilo 94.9 0.47 1.6E-05 36.9 11.6 72 63-134 180-258 (291)
64 2y4t_A DNAJ homolog subfamily 94.7 1.2 4E-05 34.9 14.0 130 5-134 209-352 (450)
65 3nf1_A KLC 1, kinesin light ch 94.6 0.55 1.9E-05 34.4 10.6 122 7-134 69-218 (311)
66 2xcb_A PCRH, regulatory protei 94.5 0.69 2.3E-05 31.4 12.2 95 6-109 17-117 (142)
67 4a1s_A PINS, partner of inscut 94.4 0.58 2E-05 36.3 11.0 121 8-134 224-366 (411)
68 1qqe_A Vesicular transport pro 94.3 0.6 2E-05 35.8 10.9 121 8-134 78-222 (292)
69 2vyi_A SGTA protein; chaperone 94.3 0.56 1.9E-05 29.5 9.5 88 47-134 10-103 (131)
70 1na0_A Designed protein CTPR3; 94.3 0.54 1.8E-05 29.3 10.0 87 48-134 8-100 (125)
71 3q49_B STIP1 homology and U bo 94.3 0.66 2.3E-05 30.2 10.3 88 47-134 7-100 (137)
72 4abn_A Tetratricopeptide repea 94.3 0.42 1.4E-05 39.9 10.6 21 7-27 137-157 (474)
73 4gyw_A UDP-N-acetylglucosamine 94.2 0.94 3.2E-05 41.0 13.4 88 47-134 41-134 (723)
74 2gw1_A Mitochondrial precursor 94.1 0.63 2.2E-05 36.8 10.8 129 6-134 236-395 (514)
75 3mkr_A Coatomer subunit epsilo 94.1 1.6 5.4E-05 33.9 13.3 116 6-134 100-223 (291)
76 3upv_A Heat shock protein STI1 94.0 0.72 2.5E-05 30.1 9.5 60 48-107 37-101 (126)
77 2vgx_A Chaperone SYCD; alterna 93.9 0.66 2.3E-05 32.3 9.6 87 48-134 20-112 (148)
78 1xnf_A Lipoprotein NLPI; TPR, 93.9 0.58 2E-05 33.8 9.5 88 47-134 41-134 (275)
79 4i17_A Hypothetical protein; T 93.9 0.8 2.7E-05 32.9 10.2 89 46-134 4-99 (228)
80 3fp2_A TPR repeat-containing p 93.9 1.2 4E-05 35.6 12.1 117 9-135 245-368 (537)
81 2xcb_A PCRH, regulatory protei 93.8 0.77 2.6E-05 31.1 9.6 87 48-134 17-109 (142)
82 1na3_A Designed protein CTPR2; 93.8 0.6 2.1E-05 28.2 8.2 60 48-107 8-72 (91)
83 1p5q_A FKBP52, FK506-binding p 93.8 0.58 2E-05 37.2 10.1 124 7-130 147-283 (336)
84 2pzi_A Probable serine/threoni 93.8 0.35 1.2E-05 42.5 9.6 119 6-134 432-557 (681)
85 2e2e_A Formate-dependent nitri 93.7 0.92 3.2E-05 31.3 10.0 85 48-132 43-136 (177)
86 4a1s_A PINS, partner of inscut 93.7 1 3.6E-05 34.8 11.3 86 49-134 166-286 (411)
87 3ro2_A PINS homolog, G-protein 93.7 1.4 4.9E-05 31.9 11.3 84 51-134 125-246 (338)
88 2lni_A Stress-induced-phosphop 93.7 0.82 2.8E-05 29.1 9.4 88 47-134 14-107 (133)
89 3upv_A Heat shock protein STI1 93.6 0.93 3.2E-05 29.5 12.8 84 49-132 4-93 (126)
90 2fo7_A Synthetic consensus TPR 93.6 0.78 2.7E-05 28.6 9.5 85 50-134 2-92 (136)
91 4ga2_A E3 SUMO-protein ligase 93.6 1.2 4.2E-05 30.8 11.1 92 7-107 31-129 (150)
92 3sf4_A G-protein-signaling mod 93.5 1 3.4E-05 34.3 10.6 122 7-134 127-290 (406)
93 3ma5_A Tetratricopeptide repea 93.3 0.5 1.7E-05 30.6 7.6 62 46-107 4-70 (100)
94 2qfc_A PLCR protein; TPR, HTH, 93.2 1 3.5E-05 34.2 10.4 85 49-133 155-259 (293)
95 3sz7_A HSC70 cochaperone (SGT) 93.2 1 3.5E-05 31.0 9.5 88 47-134 9-102 (164)
96 3gw4_A Uncharacterized protein 93.2 1 3.5E-05 31.1 9.5 123 6-134 25-170 (203)
97 2l6j_A TPR repeat-containing p 93.2 0.51 1.7E-05 29.5 7.3 62 48-109 3-69 (111)
98 1qqe_A Vesicular transport pro 93.2 2.2 7.5E-05 32.6 14.2 119 9-133 39-180 (292)
99 2kck_A TPR repeat; tetratricop 93.1 0.83 2.8E-05 28.0 8.1 94 5-107 4-106 (112)
100 3edt_B KLC 2, kinesin light ch 93.1 1.7 5.8E-05 31.0 10.8 95 7-107 85-198 (283)
101 1a17_A Serine/threonine protei 93.0 1.3 4.4E-05 29.4 12.3 114 7-129 13-135 (166)
102 2ifu_A Gamma-SNAP; membrane fu 93.0 1.7 5.7E-05 33.5 11.3 82 50-132 117-216 (307)
103 2e2e_A Formate-dependent nitri 92.8 1.6 5.4E-05 30.0 11.5 118 5-134 42-168 (177)
104 2fbn_A 70 kDa peptidylprolyl i 92.5 1.5 5.1E-05 31.1 9.7 81 50-130 89-175 (198)
105 3ieg_A DNAJ homolog subfamily 92.4 2.5 8.5E-05 31.2 13.1 88 47-134 106-211 (359)
106 2fbn_A 70 kDa peptidylprolyl i 92.4 2 6.8E-05 30.4 10.3 20 8-27 39-58 (198)
107 3ulq_A Response regulator aspa 92.3 2.5 8.4E-05 33.0 11.6 121 7-133 143-286 (383)
108 4ga2_A E3 SUMO-protein ligase 92.3 1 3.4E-05 31.3 8.5 87 48-134 30-123 (150)
109 2ifu_A Gamma-SNAP; membrane fu 92.3 1.9 6.4E-05 33.2 10.8 118 8-132 37-176 (307)
110 1a17_A Serine/threonine protei 92.0 1.8 6.1E-05 28.6 10.0 90 45-134 9-104 (166)
111 1ihg_A Cyclophilin 40; ppiase 91.8 1.9 6.4E-05 35.1 10.8 123 8-130 224-360 (370)
112 3gyz_A Chaperone protein IPGC; 91.7 1.7 5.9E-05 31.0 9.3 88 47-134 34-127 (151)
113 3ro3_A PINS homolog, G-protein 91.6 1.5 5.1E-05 28.2 8.2 96 8-109 50-160 (164)
114 4gco_A Protein STI-1; structur 91.4 2.3 7.7E-05 28.8 10.8 91 8-107 14-110 (126)
115 3u4t_A TPR repeat-containing p 91.4 1.5 5.3E-05 31.6 8.9 87 48-134 2-97 (272)
116 4abn_A Tetratricopeptide repea 91.3 0.88 3E-05 37.9 8.4 114 7-129 170-310 (474)
117 2r5s_A Uncharacterized protein 91.2 2.7 9.3E-05 29.2 11.2 58 75-132 105-165 (176)
118 3ulq_A Response regulator aspa 91.1 2.7 9.2E-05 32.8 10.6 117 12-134 108-247 (383)
119 3q15_A PSP28, response regulat 90.4 4.6 0.00016 31.5 11.4 122 7-134 141-284 (378)
120 1hxi_A PEX5, peroxisome target 90.4 1.6 5.4E-05 29.3 7.7 87 10-105 20-112 (121)
121 1kt0_A FKBP51, 51 kDa FK506-bi 90.3 3 0.0001 34.6 10.7 124 7-130 268-404 (457)
122 2dba_A Smooth muscle cell asso 89.6 2.9 9.9E-05 27.0 9.1 87 47-133 26-121 (148)
123 1hh8_A P67PHOX, NCF-2, neutrop 89.3 4.2 0.00014 28.4 9.9 94 6-108 36-151 (213)
124 2dba_A Smooth muscle cell asso 88.7 3.4 0.00012 26.7 11.4 98 5-108 26-129 (148)
125 2vsy_A XCC0866; transferase, g 88.7 3.8 0.00013 34.2 10.3 88 47-134 21-114 (568)
126 4gco_A Protein STI-1; structur 88.6 4.1 0.00014 27.4 9.5 85 50-134 14-104 (126)
127 4g26_A Pentatricopeptide repea 88.5 2.8 9.7E-05 35.9 9.5 88 48-135 104-199 (501)
128 2kat_A Uncharacterized protein 88.2 3.2 0.00011 26.6 7.7 62 47-108 17-83 (115)
129 2c2l_A CHIP, carboxy terminus 87.8 5.3 0.00018 30.5 9.9 62 47-108 36-102 (281)
130 3mv2_B Coatomer subunit epsilo 87.5 8.2 0.00028 31.8 11.4 117 6-135 99-235 (310)
131 3qky_A Outer membrane assembly 87.4 6.8 0.00023 28.6 10.3 77 48-124 88-198 (261)
132 3rkv_A Putative peptidylprolyl 87.2 5.3 0.00018 27.1 10.8 116 7-122 11-143 (162)
133 3gw4_A Uncharacterized protein 87.1 5.5 0.00019 27.2 11.0 98 7-110 66-179 (203)
134 4gcn_A Protein STI-1; structur 86.6 5.4 0.00018 26.7 10.2 82 49-130 8-102 (127)
135 1elw_A TPR1-domain of HOP; HOP 86.1 4.2 0.00014 24.8 12.7 93 6-107 3-101 (118)
136 3mkq_A Coatomer beta'-subunit; 86.0 15 0.00052 31.2 12.8 97 6-108 680-776 (814)
137 4g26_A Pentatricopeptide repea 85.7 12 0.00041 32.0 11.9 105 5-116 103-213 (501)
138 3rkv_A Putative peptidylprolyl 85.3 4.5 0.00016 27.5 7.5 91 44-134 6-120 (162)
139 4gcn_A Protein STI-1; structur 85.2 6.5 0.00022 26.3 10.8 95 9-112 10-117 (127)
140 1hxi_A PEX5, peroxisome target 84.5 6.9 0.00024 26.0 8.1 85 50-134 18-108 (121)
141 3ma5_A Tetratricopeptide repea 84.4 6 0.0002 25.2 8.5 63 4-75 4-67 (100)
142 2h6f_A Protein farnesyltransfe 83.5 11 0.00039 30.8 10.4 80 47-126 164-250 (382)
143 3q15_A PSP28, response regulat 83.5 4.3 0.00015 31.7 7.5 96 7-108 182-291 (378)
144 3qky_A Outer membrane assembly 83.3 11 0.00038 27.4 11.7 122 4-131 12-168 (261)
145 2kat_A Uncharacterized protein 83.2 4.1 0.00014 26.1 6.2 63 4-75 16-79 (115)
146 3k9i_A BH0479 protein; putativ 82.4 3.1 0.00011 27.0 5.4 61 47-107 25-90 (117)
147 2xev_A YBGF; tetratricopeptide 82.1 7.5 0.00026 24.7 9.9 58 50-107 40-105 (129)
148 2xev_A YBGF; tetratricopeptide 82.1 7.6 0.00026 24.6 10.0 83 51-133 4-98 (129)
149 2l6j_A TPR repeat-containing p 82.0 5.8 0.0002 24.4 6.4 61 6-75 3-64 (111)
150 3k9i_A BH0479 protein; putativ 80.9 6.3 0.00021 25.5 6.5 61 6-75 26-87 (117)
151 2c2l_A CHIP, carboxy terminus 80.8 16 0.00056 27.7 13.1 29 47-75 70-98 (281)
152 3u3w_A Transcriptional activat 80.4 13 0.00043 28.0 8.9 115 9-126 117-251 (293)
153 1p5q_A FKBP52, FK506-binding p 79.8 17 0.00058 28.5 9.9 90 45-134 143-253 (336)
154 1ihg_A Cyclophilin 40; ppiase 79.4 9.9 0.00034 30.8 8.6 93 42-134 216-330 (370)
155 3qou_A Protein YBBN; thioredox 78.9 19 0.00065 27.3 11.1 66 66-131 202-275 (287)
156 3rjv_A Putative SEL1 repeat pr 78.7 16 0.00055 26.4 12.2 118 6-123 17-174 (212)
157 2qfc_A PLCR protein; TPR, HTH, 78.3 19 0.00065 27.0 12.4 81 54-134 120-219 (293)
158 2h6f_A Protein farnesyltransfe 77.9 27 0.00092 28.5 12.4 118 7-133 97-222 (382)
159 3urz_A Uncharacterized protein 77.5 16 0.00054 26.2 8.4 53 55-107 60-117 (208)
160 1ylm_A Hypothetical protein BS 73.8 9.4 0.00032 27.1 6.2 61 73-134 60-126 (144)
161 3urz_A Uncharacterized protein 73.7 22 0.00075 25.4 9.4 29 47-75 86-114 (208)
162 2if4_A ATFKBP42; FKBP-like, al 72.8 18 0.00062 28.5 8.2 100 8-107 180-293 (338)
163 2v5f_A Prolyl 4-hydroxylase su 72.2 16 0.00053 23.8 6.6 53 79-131 6-66 (104)
164 2pzi_A Probable serine/threoni 71.5 15 0.0005 32.2 8.0 87 47-134 431-523 (681)
165 1wao_1 Serine/threonine protei 71.4 9.8 0.00034 31.8 6.7 115 10-133 9-132 (477)
166 2hr2_A Hypothetical protein; a 70.0 31 0.0011 25.6 8.9 98 8-106 12-130 (159)
167 1kt0_A FKBP51, 51 kDa FK506-bi 69.4 39 0.0013 27.8 9.9 90 45-134 264-374 (457)
168 1na3_A Designed protein CTPR2; 68.8 15 0.00052 21.5 7.8 61 6-75 8-69 (91)
169 3u3w_A Transcriptional activat 67.5 21 0.00073 26.7 7.3 93 8-106 156-265 (293)
170 2if4_A ATFKBP42; FKBP-like, al 66.7 31 0.0011 27.1 8.4 92 43-134 173-287 (338)
171 2xm6_A Protein corresponding t 65.2 53 0.0018 26.5 13.1 60 46-105 180-250 (490)
172 1wao_1 Serine/threonine protei 65.0 7 0.00024 32.8 4.5 85 50-134 7-97 (477)
173 2ond_A Cleavage stimulation fa 62.6 47 0.0016 25.0 15.1 60 6-74 98-159 (308)
174 2r5s_A Uncharacterized protein 61.1 37 0.0013 23.2 7.9 118 8-134 7-131 (176)
175 1wy6_A Hypothetical protein ST 59.8 45 0.0016 25.7 7.8 69 64-135 76-149 (172)
176 4g1t_A Interferon-induced prot 59.0 51 0.0017 25.7 8.3 21 7-27 51-71 (472)
177 4b4t_Q 26S proteasome regulato 58.9 60 0.002 25.0 8.7 18 10-27 58-75 (434)
178 2xm6_A Protein corresponding t 57.9 73 0.0025 25.7 13.4 17 91-107 416-432 (490)
179 1hz4_A MALT regulatory protein 57.8 59 0.002 24.6 12.8 75 59-133 225-315 (373)
180 3ggo_A Prephenate dehydrogenas 55.6 29 0.001 27.8 6.5 53 47-107 257-309 (314)
181 2hr2_A Hypothetical protein; a 53.5 30 0.001 25.7 5.8 57 9-75 59-128 (159)
182 4b4t_Q 26S proteasome regulato 53.3 24 0.00083 27.2 5.5 27 81-107 58-84 (434)
183 2ond_A Cleavage stimulation fa 49.1 82 0.0028 23.6 12.8 61 47-107 97-163 (308)
184 1hz4_A MALT regulatory protein 45.8 95 0.0032 23.4 11.7 51 84-134 141-197 (373)
185 1wwp_A Hypothetical protein TT 45.4 69 0.0023 22.1 6.4 69 66-135 38-115 (119)
186 4g1t_A Interferon-induced prot 45.0 1.1E+02 0.0037 23.8 10.4 94 5-107 245-363 (472)
187 3bee_A Putative YFRE protein; 41.6 70 0.0024 20.7 6.4 62 47-108 4-73 (93)
188 2ooe_A Cleavage stimulation fa 37.9 1.3E+02 0.0046 24.3 7.9 61 48-108 424-493 (530)
189 3rjv_A Putative SEL1 repeat pr 37.5 1.1E+02 0.0037 21.8 11.8 60 49-108 125-198 (212)
190 2ooe_A Cleavage stimulation fa 36.5 1.7E+02 0.0058 23.7 13.6 116 6-130 320-444 (530)
191 2kc7_A BFR218_protein; tetratr 31.1 87 0.003 18.7 5.6 52 56-107 7-64 (99)
192 2pv7_A T-protein [includes: ch 30.1 1.4E+02 0.0048 23.2 6.6 65 47-121 222-286 (298)
193 3tmk_A Thymidylate kinase; pho 30.1 81 0.0028 24.1 5.0 61 64-124 44-107 (216)
194 3spa_A Mtrpol, DNA-directed RN 28.8 1.8E+02 0.0061 28.5 8.1 73 62-134 140-224 (1134)
195 3ktd_A Prephenate dehydrogenas 27.8 75 0.0026 26.1 4.7 52 46-106 235-286 (341)
196 3qks_A DNA double-strand break 27.5 74 0.0025 23.5 4.3 55 67-138 141-195 (203)
197 2g5c_A Prephenate dehydrogenas 26.6 2E+02 0.007 21.6 7.5 58 40-107 220-277 (281)
198 2yhc_A BAMD, UPF0169 lipoprote 26.6 1.7E+02 0.0058 20.6 12.5 48 88-135 157-208 (225)
199 1zu2_A Mitochondrial import re 26.4 1.1E+02 0.0038 22.6 5.0 29 47-75 78-117 (158)
200 1x87_A Urocanase protein; stru 25.2 61 0.0021 29.3 3.9 34 75-108 362-396 (551)
201 4fhn_B Nucleoporin NUP120; pro 25.1 1.1E+02 0.0038 28.7 5.9 75 55-129 848-956 (1139)
202 3qou_A Protein YBBN; thioredox 24.8 2.2E+02 0.0075 21.2 12.7 120 6-134 116-242 (287)
203 1uwk_A Urocanate hydratase; hy 24.7 63 0.0022 29.2 3.9 34 75-108 367-401 (557)
204 2fkn_A Urocanate hydratase; ro 24.6 63 0.0022 29.2 3.9 34 75-108 363-397 (552)
205 1zu2_A Mitochondrial import re 24.6 98 0.0033 22.9 4.5 64 42-105 29-118 (158)
No 1
>3lvg_A Clathrin heavy chain 1; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} PDB: 3lvh_A
Probab=100.00 E-value=9.5e-46 Score=331.78 Aligned_cols=128 Identities=57% Similarity=0.921 Sum_probs=115.5
Q ss_pred HHHHHHhhCCCHHHHHHHHHHHhcc---chhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhCCCcchHHHHHHHHH
Q psy1645 13 LAKIYIDSNNNPERFLKFFLVDHLS---KTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKADDPSAYMDVVETSH 89 (143)
Q Consensus 13 lakIyi~~~~~~E~fl~~~Li~~~~---~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA~dps~y~eVie~a~ 89 (143)
++.||-+.+.+.++. +|||+++. |+.+||+||++|+|||+||+|||++++|++||+|||||+|||+|.+||++|+
T Consensus 17 AF~iykKf~~~~~A~--~VL~e~i~~ldRa~eyA~~~n~p~VWs~LgkAqL~~~~v~eAIdsyIkA~Dps~y~eVi~~A~ 94 (624)
T 3lvg_A 17 RGSHMLKFDVNTSAV--QVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEVVQAAN 94 (624)
T ss_dssp ----------CCSTT--TTCCGGGCCSTTTTTSSSSCCCCCCSSSHHHHTTTSSSCTTTTTSSCCCSCCCSSSHHHHHTT
T ss_pred HHHHHHhccCcHHHH--HHHHHhccccHHHHHHHHHhCCccHHHHHHHHHHccCchHHHHHHHHhCCChHHHHHHHHHHH
Confidence 567999999999988 89999877 7899999999999999999999999999999999999999999999999999
Q ss_pred cCCChHHHHHHHHHHHhhhhhhhHHHHHHHHHHhcCChhhHHHHhcCcCCCCC
Q psy1645 90 ATESWEDLVRYLQMARKKARESYIESELIYAYARTNRLADLEEFISGEGFFEI 142 (143)
Q Consensus 90 ~~~~~e~Lv~yL~MaRk~~ke~~idt~Li~ayAk~~~l~ele~fl~~~N~a~~ 142 (143)
++|+||||||||+||||++|||+|||+|+|||||+|||+|||+||+|||+|||
T Consensus 95 ~~~~~edLv~yL~MaRk~~ke~~IDteLi~ayAk~~rL~elEefl~~~N~A~i 147 (624)
T 3lvg_A 95 TSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHI 147 (624)
T ss_dssp TSSCCTTHHHHHHTTSTTCCSTTTTHHHHHHHHTSCSSSTTTSTTSCCSSSCT
T ss_pred hCCCHHHHHHHHHHHHHHhcccccHHHHHHHHHhhCcHHHHHHHHcCCCcccH
Confidence 99999999999999999999999999999999999999999999999999997
No 2
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=99.98 E-value=6.5e-33 Score=269.34 Aligned_cols=103 Identities=68% Similarity=1.079 Sum_probs=87.8
Q ss_pred hHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhCCCcchHHHHHHHHHcCCChHHHHHHHHHHHhhhhhhhHHHHHHH
Q psy1645 40 PFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKADDPSAYMDVVETSHATESWEDLVRYLQMARKKARESYIESELIY 119 (143)
Q Consensus 40 arYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~ke~~idt~Li~ 119 (143)
.+|++|++.|.+|+++|++|+..|.+++||+||+||+||+.|.+|++.+.+.|+||++|+||+|||++.++|.|||+|++
T Consensus 1096 iE~Aervn~p~vWsqLAKAql~~G~~kEAIdsYiKAdD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~Laf 1175 (1630)
T 1xi4_A 1096 YEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIF 1175 (1630)
T ss_pred HHHHHhcCCHHHHHHHHHHHHhCCCHHHHHHHHHhcCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHHH
Confidence 44444444444444444445545555999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCChhhHHHHhcCcCCCCC
Q psy1645 120 AYARTNRLADLEEFISGEGFFEI 142 (143)
Q Consensus 120 ayAk~~~l~ele~fl~~~N~a~~ 142 (143)
||||+|++.++|+|++++|++++
T Consensus 1176 aYAKl~rleele~fI~~~n~ad~ 1198 (1630)
T 1xi4_A 1176 ALAKTNRLAELEEFINGPNNAHI 1198 (1630)
T ss_pred HHHhhcCHHHHHHHHhCCCHHHH
Confidence 99999999999999999998754
No 3
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=99.92 E-value=9.7e-27 Score=204.30 Aligned_cols=120 Identities=61% Similarity=0.992 Sum_probs=11.9
Q ss_pred CCCHHHHHHHHHHHhcc---chhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhCCCcchHHHHHHHHHcCCChHHH
Q psy1645 21 NNNPERFLKFFLVDHLS---KTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKADDPSAYMDVVETSHATESWEDL 97 (143)
Q Consensus 21 ~~~~E~fl~~~Li~~~~---~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA~dps~y~eVie~a~~~~~~e~L 97 (143)
+.+.++. .+||+.++ ++.+|+++++.|++|+++|++|+..+.+++||+||||++||+.|.+|+.+|++.|+||++
T Consensus 3 ~~~~~a~--~~ll~~~~~ld~A~~fae~~~~~~vWs~La~A~l~~g~~~eAIdsfika~D~~~y~~V~~~ae~~g~~EeA 80 (449)
T 1b89_A 3 DVNTSAV--QVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEVVQAANTSGNWEEL 80 (449)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCcHHHH--HHHHHHccCHHHHHHHHHhCCChHHHHHHHHHHHHcCCHHHHHHHHHcCCCHHHHHHHHHHHHhCCCHHHH
Confidence 4555665 78888877 689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhhhHHHHHHHHHHhcCChhhHHHHhcCcCCCCC
Q psy1645 98 VRYLQMARKKARESYIESELIYAYARTNRLADLEEFISGEGFFEI 142 (143)
Q Consensus 98 v~yL~MaRk~~ke~~idt~Li~ayAk~~~l~ele~fl~~~N~a~~ 142 (143)
++||+|+|++.++|.||++|++||+|+|++.++|+|+.+||++..
T Consensus 81 i~yl~~ark~~~~~~i~~~Li~~Y~Klg~l~e~e~f~~~pn~~a~ 125 (449)
T 1b89_A 81 VKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHI 125 (449)
T ss_dssp ----------------------------CHHHHTTTTTCC-----
T ss_pred HHHHHHHHHhCccchhHHHHHHHHHHhCCHHHHHHHHcCCcHHHH
Confidence 999999999999999999999999999999999999999998753
No 4
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.58 E-value=1.1e-07 Score=93.62 Aligned_cols=123 Identities=34% Similarity=0.587 Sum_probs=105.6
Q ss_pred CCcchHHHHHHHHHHHhhCCCHHHHHHHH--------------------------------HHHhccch------hHHHH
Q psy1645 3 ACTEPATHNALAKIYIDSNNNPERFLKFF--------------------------------LVDHLSKT------PFYVL 44 (143)
Q Consensus 3 ~~~~~~~~nalakIyi~~~~~~E~fl~~~--------------------------------Li~~~~~n------arYa~ 44 (143)
|+|||++||||||||||||++||+||+++ ||++|++| |||++
T Consensus 869 g~~~~~~hnalakiyid~n~npe~fL~~n~~yd~~~vgkyce~rDp~la~iay~~g~~d~eli~vt~~n~l~k~~arylv 948 (1630)
T 1xi4_A 869 GCEEPATHNALAKIYIDSNNNPERFLRENPYYDSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLV 948 (1630)
T ss_pred CCCCHHHHHHHHHHHhccCCCHHHHhhccCcccHHHHHHHHHhcCcchHHHHhcccCCcHHHHHHHhcchhHHHHHHHHH
Confidence 89999999999999999999999999994 99999998 99999
Q ss_pred HhcchhHHHHH------HHHhhhhh-------------hhHHHHHHHHhCCCcchHHHHHHHHHcCCChHHHHHHHHHHH
Q psy1645 45 RCNEPGVWSQL------AKAQLQKG-------------LVKESIDSFIKADDPSAYMDVVETSHATESWEDLVRYLQMAR 105 (143)
Q Consensus 45 k~~~~~vWs~l------~raqL~~~-------------~V~eAI~sFIkA~dps~y~eVie~a~~~~~~e~Lv~yL~MaR 105 (143)
+|++|+||+++ +|+||.++ .||.+|++||.+++|+++++++|++.-.+.
T Consensus 949 ~r~d~~lW~~vl~~~n~~RR~Lidqv~a~aL~e~~~PeeVs~~vKaf~~aglp~EaieLLEKivl~~s------------ 1016 (1630)
T 1xi4_A 949 RRKDPELWGSVLLESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNS------------ 1016 (1630)
T ss_pred HhcCHHHHHHHhcCCcHHHHHHHHHHHHhhcccccCHHHhHHHHHHHHhCCCHHHHHHHHHHHHcCCC------------
Confidence 99999999997 59999987 669999999999999999999999996654
Q ss_pred hhhhhhhHHHHHHHHHHhcCChhhHHHHhcCcC
Q psy1645 106 KKARESYIESELIYAYARTNRLADLEEFISGEG 138 (143)
Q Consensus 106 k~~ke~~idt~Li~ayAk~~~l~ele~fl~~~N 138 (143)
.-+..+.+...|+.+-.|++. ++.++++...+
T Consensus 1017 ~fs~n~~LqnlLi~tAIkaD~-~Rv~eyI~kLd 1048 (1630)
T 1xi4_A 1017 VFSEHRNLQNLLILTAIKADR-TRVMEYINRLD 1048 (1630)
T ss_pred cccccHHHHHHHHHHHHHhCh-hhHHHHHHHhh
Confidence 124456667777777777743 77777766654
No 5
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=97.20 E-value=0.0021 Score=50.19 Aligned_cols=89 Identities=12% Similarity=0.136 Sum_probs=67.3
Q ss_pred chhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhCCCcchH-------------HHHHHHHHcCCCh----------
Q psy1645 38 KTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKADDPSAY-------------MDVVETSHATESW---------- 94 (143)
Q Consensus 38 ~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA~dps~y-------------~eVie~a~~~~~~---------- 94 (143)
.+.+.|.+.+++..|.+||..-|..+.+.-|..||-+++|-+.+ ..+-+.|+..|++
T Consensus 23 ~A~e~a~~l~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~~L~~Ly~~tg~~e~L~kla~iA~~~g~~n~af~~~l~l 102 (177)
T 3mkq_B 23 AALDEAKKLNDSITWERLIQEALAQGNASLAEMIYQTQHSFDKLSFLYLVTGDVNKLSKMQNIAQTREDFGSMLLNTFYN 102 (177)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHcCChHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHHHCccHHHHHHHHHHc
Confidence 35677888899999999999999999999999999999998877 5555566655444
Q ss_pred ---HHHHHHHHHHHhhhhhhhHHHHHHHHHHhcCChhhHHHHh
Q psy1645 95 ---EDLVRYLQMARKKARESYIESELIYAYARTNRLADLEEFI 134 (143)
Q Consensus 95 ---e~Lv~yL~MaRk~~ke~~idt~Li~ayAk~~~l~ele~fl 134 (143)
++.+..|. ++.|- .+.+.+||+..++++-+=|
T Consensus 103 Gdv~~~i~lL~---~~~r~-----~eA~~~A~t~g~~~~a~~~ 137 (177)
T 3mkq_B 103 NSTKERSSIFA---EGGSL-----PLAYAVAKANGDEAAASAF 137 (177)
T ss_dssp TCHHHHHHHHH---HTTCH-----HHHHHHHHHTTCHHHHHHH
T ss_pred CCHHHHHHHHH---HCCCh-----HHHHHHHHHcCcHHHHHHH
Confidence 55555553 34443 3788889988887765444
No 6
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=97.01 E-value=0.018 Score=47.33 Aligned_cols=130 Identities=12% Similarity=0.025 Sum_probs=89.1
Q ss_pred cchHHHHHHHHHHHhhCCCHHHHHHHH-HHH--------------hcc------chhHHHH-----HhcchhHHHHHHHH
Q psy1645 5 TEPATHNALAKIYIDSNNNPERFLKFF-LVD--------------HLS------KTPFYVL-----RCNEPGVWSQLAKA 58 (143)
Q Consensus 5 ~~~~~~nalakIyi~~~~~~E~fl~~~-Li~--------------~~~------~narYa~-----k~~~~~vWs~l~ra 58 (143)
.++.+++.++.+|.+.++..++.-.+. .++ ... ++.++.. ..+++..|..++..
T Consensus 371 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 450 (597)
T 2xpi_A 371 EKAVTWLAVGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQ 450 (597)
T ss_dssp TSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHH
Confidence 456778888888888888777663331 111 111 0112221 12467788888888
Q ss_pred hhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhhhh----h----hhHHHHHHHHHHhcC
Q psy1645 59 QLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKKAR----E----SYIESELIYAYARTN 125 (143)
Q Consensus 59 qL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~k----e----~~idt~Li~ayAk~~ 125 (143)
....+...+|++.|-++ ++|..|..+.....+.|++++-++++..+.+... + +.+=..|..+|.+.|
T Consensus 451 ~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g 530 (597)
T 2xpi_A 451 HMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLK 530 (597)
T ss_dssp HHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTT
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhc
Confidence 88888888888888664 6788888888888889999998888887766532 2 345567888888888
Q ss_pred ChhhHHHHh
Q psy1645 126 RLADLEEFI 134 (143)
Q Consensus 126 ~l~ele~fl 134 (143)
+..+-.+++
T Consensus 531 ~~~~A~~~~ 539 (597)
T 2xpi_A 531 MYDAAIDAL 539 (597)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 887766554
No 7
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=96.99 E-value=0.045 Score=38.16 Aligned_cols=130 Identities=8% Similarity=0.016 Sum_probs=69.2
Q ss_pred CcchHHHHHHHHHHHhhCCCHHHHHHH-HHHHhccch--------------------hH-----HHHHhcchhHHHHHHH
Q psy1645 4 CTEPATHNALAKIYIDSNNNPERFLKF-FLVDHLSKT--------------------PF-----YVLRCNEPGVWSQLAK 57 (143)
Q Consensus 4 ~~~~~~~nalakIyi~~~~~~E~fl~~-~Li~~~~~n--------------------ar-----Ya~k~~~~~vWs~l~r 57 (143)
+..+.+|..+|++|-..++..++.-.+ ..++.-+.+ .. .....+.+.+|..+|.
T Consensus 2 ge~~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 81 (184)
T 3vtx_A 2 GETTTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGS 81 (184)
T ss_dssp --CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHH
Confidence 356789999999999999988876333 122222211 00 1111233444555555
Q ss_pred HhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhh-hhhhhHHHHHHHHHHhcCChhhHH
Q psy1645 58 AQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKK-ARESYIESELIYAYARTNRLADLE 131 (143)
Q Consensus 58 aqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~-~ke~~idt~Li~ayAk~~~l~ele 131 (143)
.....+....|++.|-++ +++..+..+-..-.+.|+|++=+.+++.+-+. -..+.+=..|..+|.+.|+..+=.
T Consensus 82 ~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~ 161 (184)
T 3vtx_A 82 ANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAV 161 (184)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHH
Confidence 444444455555555432 33444444444455566666666666655543 234444555666666666665544
Q ss_pred HH
Q psy1645 132 EF 133 (143)
Q Consensus 132 ~f 133 (143)
++
T Consensus 162 ~~ 163 (184)
T 3vtx_A 162 KY 163 (184)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 8
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.95 E-value=0.011 Score=50.77 Aligned_cols=96 Identities=18% Similarity=0.194 Sum_probs=65.8
Q ss_pred hccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhCCCcchHHHHHHHHHcCCChHHHHHHHHHHHhhhhhhhHH
Q psy1645 35 HLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKADDPSAYMDVVETSHATESWEDLVRYLQMARKKARESYIE 114 (143)
Q Consensus 35 ~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~ke~~id 114 (143)
+...+.+.+...+++.+|.++|+..|..+.+..|+++|.+++|...+..|-.. .|..+.|.+...++.+ +...+
T Consensus 667 ~~~~A~~~~~~~~~~~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~---~~~~~~~~~~~~~a~~---~~~~~ 740 (814)
T 3mkq_A 667 QLTLARDLLTDESAEMKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSS---FNNKEGLVTLAKDAET---TGKFN 740 (814)
T ss_dssp CHHHHHHHHTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHH---TTCHHHHHHHHHHHHH---TTCHH
T ss_pred CHHHHHHHHHhhCcHhHHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHH---cCCHHHHHHHHHHHHH---cCchH
Confidence 33345688899999999999999999999999999999999998776655443 5666655554444433 33333
Q ss_pred HHHHHHHHhcCChhhHHHHhcCc
Q psy1645 115 SELIYAYARTNRLADLEEFISGE 137 (143)
Q Consensus 115 t~Li~ayAk~~~l~ele~fl~~~ 137 (143)
.+- .+|-+.|+..+-++++...
T Consensus 741 ~A~-~~~~~~g~~~~a~~~~~~~ 762 (814)
T 3mkq_A 741 LAF-NAYWIAGDIQGAKDLLIKS 762 (814)
T ss_dssp HHH-HHHHHHTCHHHHHHHHHHT
T ss_pred HHH-HHHHHcCCHHHHHHHHHHc
Confidence 222 1355566666666655443
No 9
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=96.94 E-value=0.013 Score=48.13 Aligned_cols=131 Identities=11% Similarity=0.016 Sum_probs=94.7
Q ss_pred cchHHHHHHHHHHHhhCCCHHHHHHHH---------------HHHhcc------chhHHHHH-----hcchhHHHHHHHH
Q psy1645 5 TEPATHNALAKIYIDSNNNPERFLKFF---------------LVDHLS------KTPFYVLR-----CNEPGVWSQLAKA 58 (143)
Q Consensus 5 ~~~~~~nalakIyi~~~~~~E~fl~~~---------------Li~~~~------~narYa~k-----~~~~~vWs~l~ra 58 (143)
.++..++.++.+|...++..++.-... |..... ++.++..+ .+++..|..++..
T Consensus 337 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 416 (597)
T 2xpi_A 337 YNLDVYPLHLASLHESGEKNKLYLISNDLVDRHPEKAVTWLAVGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHS 416 (597)
T ss_dssp TCCTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 356678899999999999887764431 111111 12333332 2457788888888
Q ss_pred hhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhh-hhhhhHHHHHHHHHHhcCChhhHHH
Q psy1645 59 QLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKK-ARESYIESELIYAYARTNRLADLEE 132 (143)
Q Consensus 59 qL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~-~ke~~idt~Li~ayAk~~~l~ele~ 132 (143)
....+...+|++.|-++ +++..+..+.....+.|.+++-++++..+.+. ..++.+=..++.+|.+.|+..+-.+
T Consensus 417 ~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 496 (597)
T 2xpi_A 417 FAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSDMQTAIN 496 (597)
T ss_dssp HHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHH
Confidence 88888888998888653 46777888888889999999998888877654 3467777888999999999887666
Q ss_pred Hhc
Q psy1645 133 FIS 135 (143)
Q Consensus 133 fl~ 135 (143)
++.
T Consensus 497 ~~~ 499 (597)
T 2xpi_A 497 HFQ 499 (597)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 10
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=96.91 E-value=0.025 Score=43.68 Aligned_cols=122 Identities=13% Similarity=0.160 Sum_probs=96.0
Q ss_pred chHHHHHHHHHHHhhCCCHHHHHHH-HHHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcc
Q psy1645 6 EPATHNALAKIYIDSNNNPERFLKF-FLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPS 79 (143)
Q Consensus 6 ~~~~~nalakIyi~~~~~~E~fl~~-~Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps 79 (143)
++.++..+|.+|...++..++.-.. ..++. .-+.+.+|..+|......+...+|++.|-++ +++.
T Consensus 212 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~---------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~ 282 (365)
T 4eqf_A 212 DPDLQTGLGVLFHLSGEFNRAIDAFNAALTV---------RPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIR 282 (365)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH---------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh---------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchH
Confidence 6778889999999999888876222 12222 1245789999999999999999999999664 6677
Q ss_pred hHHHHHHHHHcCCChHHHHHHHHHHHhhhhh-------------hhHHHHHHHHHHhcCChhhHHHHhcC
Q psy1645 80 AYMDVVETSHATESWEDLVRYLQMARKKARE-------------SYIESELIYAYARTNRLADLEEFISG 136 (143)
Q Consensus 80 ~y~eVie~a~~~~~~e~Lv~yL~MaRk~~ke-------------~~idt~Li~ayAk~~~l~ele~fl~~ 136 (143)
.+..+-....+.|+|++=+.++..+.+...+ +.+=..|..+|...|+.+..+.+...
T Consensus 283 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~a~~~~~~ 352 (365)
T 4eqf_A 283 SRYNLGISCINLGAYREAVSNFLTALSLQRKSRNQQQVPHPAISGNIWAALRIALSLMDQPELFQAANLG 352 (365)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHCC------------CHHHHHHHHHHHHHTCHHHHHHHHTT
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccCCCcccchhhhHHHHHHHHHHHHHHcCcHHHHHHHHHh
Confidence 8888888889999999999999988876543 45667788889999999988887754
No 11
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=96.88 E-value=0.04 Score=40.91 Aligned_cols=121 Identities=15% Similarity=0.138 Sum_probs=92.4
Q ss_pred chHHHHHHHHHHHhhCCCHHHHHHH-HHHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcc
Q psy1645 6 EPATHNALAKIYIDSNNNPERFLKF-FLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPS 79 (143)
Q Consensus 6 ~~~~~nalakIyi~~~~~~E~fl~~-~Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps 79 (143)
++..+..+|.+|...++..++.-.. ..++. .-+.+..|..+|......+...+|++.|-++ +++.
T Consensus 171 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~---------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~ 241 (327)
T 3cv0_A 171 DAQLHASLGVLYNLSNNYDSAAANLRRAVEL---------RPDDAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVR 241 (327)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred CHHHHHHHHHHHHHhccHHHHHHHHHHHHHh---------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHH
Confidence 5677888888888888877776221 12221 1245788999999998888999999988774 6677
Q ss_pred hHHHHHHHHHcCCChHHHHHHHHHHHhhhhh-------------hhHHHHHHHHHHhcCChhhHHHHhc
Q psy1645 80 AYMDVVETSHATESWEDLVRYLQMARKKARE-------------SYIESELIYAYARTNRLADLEEFIS 135 (143)
Q Consensus 80 ~y~eVie~a~~~~~~e~Lv~yL~MaRk~~ke-------------~~idt~Li~ayAk~~~l~ele~fl~ 135 (143)
.+..+.....+.|+|++-+++++.+-+...+ +.+=..+..+|.+.|+..+-.++..
T Consensus 242 ~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~ 310 (327)
T 3cv0_A 242 VMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMNRPDLVELTYA 310 (327)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTTCHHHHHHHTT
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 7888888888999999999999988766544 5556678889999999988776654
No 12
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=96.88 E-value=0.022 Score=43.46 Aligned_cols=121 Identities=14% Similarity=0.115 Sum_probs=94.4
Q ss_pred chHHHHHHHHHHHhhCCCHHHHHHH-HHHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcc
Q psy1645 6 EPATHNALAKIYIDSNNNPERFLKF-FLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPS 79 (143)
Q Consensus 6 ~~~~~nalakIyi~~~~~~E~fl~~-~Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps 79 (143)
++.++..+|.+|...++..++.-.. ..++. .-+.+.+|..+|......+...+|++.|-++ +++.
T Consensus 216 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~---------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~ 286 (368)
T 1fch_A 216 DPDVQCGLGVLFNLSGEYDKAVDCFTAALSV---------RPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIR 286 (368)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---------CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH
Confidence 5778899999999999988876222 12222 1245788999999999989999999998775 6677
Q ss_pred hHHHHHHHHHcCCChHHHHHHHHHHHhhhhh------------hhHHHHHHHHHHhcCChhhHHHHhc
Q psy1645 80 AYMDVVETSHATESWEDLVRYLQMARKKARE------------SYIESELIYAYARTNRLADLEEFIS 135 (143)
Q Consensus 80 ~y~eVie~a~~~~~~e~Lv~yL~MaRk~~ke------------~~idt~Li~ayAk~~~l~ele~fl~ 135 (143)
.+..+-....+.|+|++=+.++..+-+...+ +.+=..|..+|.+.|+..+-+.+..
T Consensus 287 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~ 354 (368)
T 1fch_A 287 SRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQSDAYGAADA 354 (368)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHHHTCGGGHHHHHT
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHHhCChHhHHHhHH
Confidence 8888888888999999999999988765433 3556678899999999988777654
No 13
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=96.79 E-value=0.038 Score=39.46 Aligned_cols=130 Identities=8% Similarity=0.029 Sum_probs=83.1
Q ss_pred cchHHHHHHHHHHHhhCCCHHHHHHHH-HHHhcc--------------------chhHHHHH-----hcchhHHHHHHHH
Q psy1645 5 TEPATHNALAKIYIDSNNNPERFLKFF-LVDHLS--------------------KTPFYVLR-----CNEPGVWSQLAKA 58 (143)
Q Consensus 5 ~~~~~~nalakIyi~~~~~~E~fl~~~-Li~~~~--------------------~narYa~k-----~~~~~vWs~l~ra 58 (143)
.++..+..+|.+|...++..++.-... .++... ++.++..+ -+.+.+|..++..
T Consensus 55 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~ 134 (243)
T 2q7f_A 55 EDAIPYINFANLLSSVNELERALAFYDKALELDSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTV 134 (243)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 345667777777777777666652221 111100 11222221 2456778888887
Q ss_pred hhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhhh-hhhhHHHHHHHHHHhcCChhhHHH
Q psy1645 59 QLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKKA-RESYIESELIYAYARTNRLADLEE 132 (143)
Q Consensus 59 qL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~-ke~~idt~Li~ayAk~~~l~ele~ 132 (143)
....+...+|++.|-++ +++..+..+.....+.|+|++-+++++.+.+.. ..+.+=..+..+|.+.|+..+-.+
T Consensus 135 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~ 214 (243)
T 2q7f_A 135 LVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAYKENREKALE 214 (243)
T ss_dssp HHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTHHHH
T ss_pred HHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHccCHHHHHH
Confidence 77777778887777653 566677777777778888888888888776653 345556667778888888776655
Q ss_pred Hh
Q psy1645 133 FI 134 (143)
Q Consensus 133 fl 134 (143)
++
T Consensus 215 ~~ 216 (243)
T 2q7f_A 215 ML 216 (243)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 14
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=96.63 E-value=0.077 Score=35.65 Aligned_cols=88 Identities=10% Similarity=0.124 Sum_probs=62.5
Q ss_pred cchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhhh-hhhhHHHHHHHH
Q psy1645 47 NEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKKA-RESYIESELIYA 120 (143)
Q Consensus 47 ~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~-ke~~idt~Li~a 120 (143)
+.+.+|..++......+...+|++.|-++ +++..+..+.....+.|+|++-+.++..+-+.. ..+.+=..+..+
T Consensus 74 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 153 (186)
T 3as5_A 74 DNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFS 153 (186)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHH
Confidence 45677777887777777777777777553 566667777777778888888888888776553 345556667778
Q ss_pred HHhcCChhhHHHHh
Q psy1645 121 YARTNRLADLEEFI 134 (143)
Q Consensus 121 yAk~~~l~ele~fl 134 (143)
|.+.|+..+-.+++
T Consensus 154 ~~~~~~~~~A~~~~ 167 (186)
T 3as5_A 154 YEQMGRHEEALPHF 167 (186)
T ss_dssp HHHTTCHHHHHHHH
T ss_pred HHHcCCHHHHHHHH
Confidence 88888876655443
No 15
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=96.62 E-value=0.058 Score=34.10 Aligned_cols=118 Identities=17% Similarity=0.256 Sum_probs=86.4
Q ss_pred HHHHHHHHHHhhCCCHHHHHHHH-HHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHH
Q psy1645 9 THNALAKIYIDSNNNPERFLKFF-LVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYM 82 (143)
Q Consensus 9 ~~nalakIyi~~~~~~E~fl~~~-Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~ 82 (143)
.+..+|.+|...++..++.-... .++. ..+.+..|..++......+...+|++.|-++ +++..+.
T Consensus 3 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~---------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 73 (136)
T 2fo7_A 3 AWYNLGNAYYKQGDYDEAIEYYQKALEL---------DPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWY 73 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHH---------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHHc---------CCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHH
Confidence 57789999999998877762221 2221 1235678888888877778888888877654 4566677
Q ss_pred HHHHHHHcCCChHHHHHHHHHHHhhh-hhhhHHHHHHHHHHhcCChhhHHHHhc
Q psy1645 83 DVVETSHATESWEDLVRYLQMARKKA-RESYIESELIYAYARTNRLADLEEFIS 135 (143)
Q Consensus 83 eVie~a~~~~~~e~Lv~yL~MaRk~~-ke~~idt~Li~ayAk~~~l~ele~fl~ 135 (143)
.+.....+.|+|++-++++..+.+.. ..+.+=..+..+|.+.|+..+-.+++.
T Consensus 74 ~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 127 (136)
T 2fo7_A 74 NLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQ 127 (136)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHccHHHHHHHHH
Confidence 78888888999999999998887653 345566678888999999877665543
No 16
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=96.50 E-value=0.037 Score=39.59 Aligned_cols=92 Identities=12% Similarity=0.159 Sum_probs=56.7
Q ss_pred cchHHHHHHHHHHHhhCCCHHHHHHHH-HHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhCCC------
Q psy1645 5 TEPATHNALAKIYIDSNNNPERFLKFF-LVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKADD------ 77 (143)
Q Consensus 5 ~~~~~~nalakIyi~~~~~~E~fl~~~-Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA~d------ 77 (143)
+....+..+|.+|...+++.++.-... .++. . +.+.+|..+|......+...+|++.|-++-.
T Consensus 3 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~-------~---~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~ 72 (258)
T 3uq3_A 3 SMADKEKAEGNKFYKARQFDEAIEHYNKAWEL-------H---KDITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMR 72 (258)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------S---CCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh-------h---ccHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccc
Confidence 456778888999998888888762221 1111 1 4566677777666666666666666654321
Q ss_pred ------cchHHHHHHHHHcCCChHHHHHHHHHHHh
Q psy1645 78 ------PSAYMDVVETSHATESWEDLVRYLQMARK 106 (143)
Q Consensus 78 ------ps~y~eVie~a~~~~~~e~Lv~yL~MaRk 106 (143)
+..+..+-....+.|+|++=+.+++.+.+
T Consensus 73 ~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 107 (258)
T 3uq3_A 73 ADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLT 107 (258)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHh
Confidence 34455555555566777776666666554
No 17
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=96.50 E-value=0.071 Score=38.56 Aligned_cols=129 Identities=12% Similarity=0.091 Sum_probs=70.5
Q ss_pred chHHHHHHHHHHHhhCCCHHHHHHHH-HHHhcc--------------------chhHHHHHh-------cchhHHHHHHH
Q psy1645 6 EPATHNALAKIYIDSNNNPERFLKFF-LVDHLS--------------------KTPFYVLRC-------NEPGVWSQLAK 57 (143)
Q Consensus 6 ~~~~~nalakIyi~~~~~~E~fl~~~-Li~~~~--------------------~narYa~k~-------~~~~vWs~l~r 57 (143)
.+..+..+|.+|...++..++.-... .++..+ ++.++..+. ..+.+|..+|.
T Consensus 70 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~ 149 (252)
T 2ho1_A 70 SADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGL 149 (252)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHH
Confidence 46677888888888888776652221 111111 112222222 12455556666
Q ss_pred HhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhhh-hhhhHHHHHHHHHHhcCChhhHH
Q psy1645 58 AQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKKA-RESYIESELIYAYARTNRLADLE 131 (143)
Q Consensus 58 aqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~-ke~~idt~Li~ayAk~~~l~ele 131 (143)
.....+...+|++.|-++ +++..+..+.....+.|+|++-+.++..+.+.. ..+..=..+..+|.+.|+..+-.
T Consensus 150 ~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~ 229 (252)
T 2ho1_A 150 VSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKEREYVPARQYYDLFAQGGGQNARSLLLGIRLAKVFEDRDTAA 229 (252)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHccCHHHHH
Confidence 666666666666666543 345556666666666677777666666655432 22333344555566666665555
Q ss_pred HHh
Q psy1645 132 EFI 134 (143)
Q Consensus 132 ~fl 134 (143)
+++
T Consensus 230 ~~~ 232 (252)
T 2ho1_A 230 SYG 232 (252)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 18
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=96.47 E-value=0.12 Score=36.75 Aligned_cols=88 Identities=16% Similarity=0.110 Sum_probs=64.4
Q ss_pred cchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhhh-hhhhHHHHHHHH
Q psy1645 47 NEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKKA-RESYIESELIYA 120 (143)
Q Consensus 47 ~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~-ke~~idt~Li~a 120 (143)
+.+.+|..++......+...+|++.|-++ +++..+..+.....+.|+|++-+.++..+.+.. ..+.+-..+..+
T Consensus 89 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 168 (243)
T 2q7f_A 89 SAATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMC 168 (243)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHH
Confidence 45677888888877777788888777653 566677777777788899988888888776653 356666677778
Q ss_pred HHhcCChhhHHHHh
Q psy1645 121 YARTNRLADLEEFI 134 (143)
Q Consensus 121 yAk~~~l~ele~fl 134 (143)
|.+.|+..+-.+++
T Consensus 169 ~~~~~~~~~A~~~~ 182 (243)
T 2q7f_A 169 LANEGMLDEALSQF 182 (243)
T ss_dssp HHHHTCCHHHHHHH
T ss_pred HHHcCCHHHHHHHH
Confidence 88888877655544
No 19
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=96.46 E-value=0.043 Score=38.42 Aligned_cols=86 Identities=8% Similarity=-0.051 Sum_probs=49.2
Q ss_pred hhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhhh--hhhhHHHHHHHHH
Q psy1645 49 PGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKKA--RESYIESELIYAY 121 (143)
Q Consensus 49 ~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~--ke~~idt~Li~ay 121 (143)
+.+|..+|......+...+|++.|-++ +++..+..+.....+.|+|++-+.+++.+.+.. ..+..=.-+..+|
T Consensus 113 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (225)
T 2vq2_A 113 YIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWKIA 192 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Confidence 456666666666666666666666442 345555666666666677777666666555442 2233334445555
Q ss_pred HhcCChhhHHHHh
Q psy1645 122 ARTNRLADLEEFI 134 (143)
Q Consensus 122 Ak~~~l~ele~fl 134 (143)
.+.|+..+...+.
T Consensus 193 ~~~~~~~~a~~~~ 205 (225)
T 2vq2_A 193 KALGNAQAAYEYE 205 (225)
T ss_dssp HHTTCHHHHHHHH
T ss_pred HhcCcHHHHHHHH
Confidence 6666666555544
No 20
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=96.45 E-value=0.17 Score=37.27 Aligned_cols=67 Identities=15% Similarity=0.103 Sum_probs=29.9
Q ss_pred hhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhhhhhhhHHHHHHHHHHhcCChhh
Q psy1645 63 GLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKKARESYIESELIYAYARTNRLAD 129 (143)
Q Consensus 63 ~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~ke~~idt~Li~ayAk~~~l~e 129 (143)
+...+|+..|-++ +++..+..+-....+.|+|++=+.+++.+-+....+.+=..|..+|.+.|+..+
T Consensus 98 g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~la~~~~~~g~~~~ 169 (217)
T 2pl2_A 98 GYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQALALEDTPEIRSALAELYLSMGRLDE 169 (217)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHH
T ss_pred cCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcccchHHHHHHHHHHHHcCCHHH
Confidence 4555555555332 333333333344444555555555554443322333444444445555555443
No 21
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=96.43 E-value=0.026 Score=41.69 Aligned_cols=122 Identities=10% Similarity=-0.012 Sum_probs=80.3
Q ss_pred chHHHHHHHHHHHhh-----------CCCHHHHHHHHHHHhccchhHHHH--HhcchhHHHHHHHHhhhhhhhHHHHHHH
Q psy1645 6 EPATHNALAKIYIDS-----------NNNPERFLKFFLVDHLSKTPFYVL--RCNEPGVWSQLAKAQLQKGLVKESIDSF 72 (143)
Q Consensus 6 ~~~~~nalakIyi~~-----------~~~~E~fl~~~Li~~~~~narYa~--k~~~~~vWs~l~raqL~~~~V~eAI~sF 72 (143)
.+..+..+|.+|... ++..++. .. .+=+. .-+.+..|..+|......+...+|+++|
T Consensus 72 ~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~--~~--------~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~ 141 (217)
T 2pl2_A 72 YLGGYMVLSEAYVALYRQAEDRERGKGYLEQAL--SV--------LKDAERVNPRYAPLHLQRGLVYALLGERDKAEASL 141 (217)
T ss_dssp CHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHH--HH--------HHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhhhhhhhhcccccCHHHHH--HH--------HHHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHH
Confidence 455677777777776 5554444 11 11122 2246789999999999999999999999
Q ss_pred HhC----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhh-hhhhhHHHHHHHHHHhcCChhhHHHHhcCc
Q psy1645 73 IKA----DDPSAYMDVVETSHATESWEDLVRYLQMARKK-ARESYIESELIYAYARTNRLADLEEFISGE 137 (143)
Q Consensus 73 IkA----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~-~ke~~idt~Li~ayAk~~~l~ele~fl~~~ 137 (143)
-++ ++|..+..+-......|+|++=+.+++.+-+. -..+.+=..|..+|.+.|+..+=.+++...
T Consensus 142 ~~al~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~ 211 (217)
T 2pl2_A 142 KQALALEDTPEIRSALAELYLSMGRLDEALAQYAKALEQAPKDLDLRVRYASALLLKGKAEEAARAAALE 211 (217)
T ss_dssp HHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHTC--------------
T ss_pred HHHHhcccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 776 78888988888888999999999999877654 345666677888888999988755555443
No 22
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=96.38 E-value=0.098 Score=36.51 Aligned_cols=86 Identities=16% Similarity=0.069 Sum_probs=56.2
Q ss_pred chhHHHHHHHHhhhh-hhhHHHHHHHHhC----CCc---chHHHHHHHHHcCCChHHHHHHHHHHHhhh-hhhhHHHHHH
Q psy1645 48 EPGVWSQLAKAQLQK-GLVKESIDSFIKA----DDP---SAYMDVVETSHATESWEDLVRYLQMARKKA-RESYIESELI 118 (143)
Q Consensus 48 ~~~vWs~l~raqL~~-~~V~eAI~sFIkA----~dp---s~y~eVie~a~~~~~~e~Lv~yL~MaRk~~-ke~~idt~Li 118 (143)
.+.+|..++...... +...+|++.|-++ .+| ..+..+.....+.|.|++-+.++..+-+.. ..+.+=..+.
T Consensus 75 ~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la 154 (225)
T 2vq2_A 75 SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELA 154 (225)
T ss_dssp CHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred ChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHH
Confidence 566777777777777 7777777777554 233 445555566667788888777777666543 2355556677
Q ss_pred HHHHhcCChhhHHHH
Q psy1645 119 YAYARTNRLADLEEF 133 (143)
Q Consensus 119 ~ayAk~~~l~ele~f 133 (143)
.+|.+.|+..+-.++
T Consensus 155 ~~~~~~~~~~~A~~~ 169 (225)
T 2vq2_A 155 RTKMLAGQLGDADYY 169 (225)
T ss_dssp HHHHHHTCHHHHHHH
T ss_pred HHHHHcCCHHHHHHH
Confidence 777777776654443
No 23
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=96.32 E-value=0.13 Score=38.12 Aligned_cols=87 Identities=13% Similarity=0.070 Sum_probs=61.8
Q ss_pred chhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhhh----------hhhh
Q psy1645 48 EPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKKA----------RESY 112 (143)
Q Consensus 48 ~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~----------ke~~ 112 (143)
.+..|..+|......+...+|++.|-++ +++..+..+.....+.|+|++-+.+++.+-+.. ..+.
T Consensus 158 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 237 (330)
T 3hym_B 158 CHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEP 237 (330)
T ss_dssp CSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCH
T ss_pred cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHH
Confidence 3566777777777777788888877653 455666677777777888888888888777653 2245
Q ss_pred HHHHHHHHHHhcCChhhHHHHh
Q psy1645 113 IESELIYAYARTNRLADLEEFI 134 (143)
Q Consensus 113 idt~Li~ayAk~~~l~ele~fl 134 (143)
+=..+..+|.+.|+..+-.+++
T Consensus 238 ~~~~la~~~~~~g~~~~A~~~~ 259 (330)
T 3hym_B 238 LLNNLGHVCRKLKKYAEALDYH 259 (330)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHH
Confidence 6667788888888877655544
No 24
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=96.31 E-value=0.13 Score=34.54 Aligned_cols=120 Identities=11% Similarity=0.038 Sum_probs=89.8
Q ss_pred hHHHHHHHHHHHhhCCCHHHHHHHHHHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchH
Q psy1645 7 PATHNALAKIYIDSNNNPERFLKFFLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAY 81 (143)
Q Consensus 7 ~~~~nalakIyi~~~~~~E~fl~~~Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y 81 (143)
...+..+|.+|...++..++. ..+-+.... .-+.+.+|..++......+...+|++.|-++ +++..+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~A~--~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 79 (186)
T 3as5_A 8 QVYYRDKGISHAKAGRYSQAV--MLLEQVYDA------DAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVA 79 (186)
T ss_dssp HHHHHHHHHHHHHHTCHHHHH--HHHTTTCCT------TSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hHHHHHHHHHHHHhcCHHHHH--HHHHHHHHh------CccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHH
Confidence 456888999999999988877 322222221 1235788889999888888888888888663 566777
Q ss_pred HHHHHHHHcCCChHHHHHHHHHHHhhh-hhhhHHHHHHHHHHhcCChhhHHHHh
Q psy1645 82 MDVVETSHATESWEDLVRYLQMARKKA-RESYIESELIYAYARTNRLADLEEFI 134 (143)
Q Consensus 82 ~eVie~a~~~~~~e~Lv~yL~MaRk~~-ke~~idt~Li~ayAk~~~l~ele~fl 134 (143)
..+.......|+|++-++++..+.+.. ..+.+-..+..+|.+.|+..+-.+++
T Consensus 80 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~ 133 (186)
T 3as5_A 80 TVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEAIDSF 133 (186)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHHHHHH
Confidence 777778888999999999999887653 45666677888899999987765554
No 25
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=96.29 E-value=0.099 Score=33.12 Aligned_cols=113 Identities=12% Similarity=0.036 Sum_probs=83.9
Q ss_pred chHHHHHHHHHHHhhCCCHHHHHHH-HHHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHh-----CCCcc
Q psy1645 6 EPATHNALAKIYIDSNNNPERFLKF-FLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIK-----ADDPS 79 (143)
Q Consensus 6 ~~~~~nalakIyi~~~~~~E~fl~~-~Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIk-----A~dps 79 (143)
++..+..+|.+|...++..++.-.. ..++. .-+.+.+|..+|......+...+|++.|-+ .+++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~---------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~ 81 (131)
T 2vyi_A 11 EAERLKTEGNEQMKVENFEAAVHFYGKAIEL---------NPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSK 81 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred hhHHHHHHHHHHHHccCHHHHHHHHHHHHHc---------CCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHH
Confidence 4567888999999999988876222 12221 123577888999888888888888888855 45677
Q ss_pred hHHHHHHHHHcCCChHHHHHHHHHHHhhh-hhhhHHHHHHHHHHhcCCh
Q psy1645 80 AYMDVVETSHATESWEDLVRYLQMARKKA-RESYIESELIYAYARTNRL 127 (143)
Q Consensus 80 ~y~eVie~a~~~~~~e~Lv~yL~MaRk~~-ke~~idt~Li~ayAk~~~l 127 (143)
.+..+-....+.|.|++-++++..+.+.. ..+.+-..+..+|.+.|+.
T Consensus 82 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~ 130 (131)
T 2vyi_A 82 AYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKLREA 130 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHhcC
Confidence 78888888888999999999999887764 3556666777777777664
No 26
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=96.26 E-value=0.13 Score=39.12 Aligned_cols=87 Identities=16% Similarity=0.071 Sum_probs=67.4
Q ss_pred chhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhhh-hhhhHHHHHHHHH
Q psy1645 48 EPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKKA-RESYIESELIYAY 121 (143)
Q Consensus 48 ~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~-ke~~idt~Li~ay 121 (143)
.+.+|..+|......+...+|++.|-++ +++..+..+.....+.|+|++-+.+++.+-+.. ..+.+=..|..+|
T Consensus 216 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~ 295 (368)
T 1fch_A 216 DPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISC 295 (368)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 4678888888888888888888888654 566778888888888999999999998877653 3455667788888
Q ss_pred HhcCChhhHHHHh
Q psy1645 122 ARTNRLADLEEFI 134 (143)
Q Consensus 122 Ak~~~l~ele~fl 134 (143)
.+.|+..+-.+++
T Consensus 296 ~~~g~~~~A~~~~ 308 (368)
T 1fch_A 296 INLGAHREAVEHF 308 (368)
T ss_dssp HHHTCHHHHHHHH
T ss_pred HHCCCHHHHHHHH
Confidence 9999887655443
No 27
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=96.25 E-value=0.098 Score=41.12 Aligned_cols=23 Identities=9% Similarity=0.143 Sum_probs=15.3
Q ss_pred cchHHHHHHHHHHHhhCCCHHHH
Q psy1645 5 TEPATHNALAKIYIDSNNNPERF 27 (143)
Q Consensus 5 ~~~~~~nalakIyi~~~~~~E~f 27 (143)
.++.++..+|.+|...++..++.
T Consensus 175 ~~~~~~~~l~~~~~~~g~~~~A~ 197 (450)
T 2y4t_A 175 WDAELRELRAECFIKEGEPRKAI 197 (450)
T ss_dssp TCHHHHHHHHHHHHHTTCGGGGH
T ss_pred CChHHHHHHHHHHHHCCCHHHHH
Confidence 34566677777777777766655
No 28
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=96.25 E-value=0.083 Score=38.16 Aligned_cols=98 Identities=11% Similarity=0.016 Sum_probs=79.2
Q ss_pred chHHHHHHHHHHHhhCCCHHHHHHH-HHHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcc
Q psy1645 6 EPATHNALAKIYIDSNNNPERFLKF-FLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPS 79 (143)
Q Consensus 6 ~~~~~nalakIyi~~~~~~E~fl~~-~Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps 79 (143)
++..+..+|.+|...+++.++.-.+ .+++.- -+++..|..+|......+...+||++|-+| ++|.
T Consensus 35 ~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~---------P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~ 105 (151)
T 3gyz_A 35 MMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYD---------FYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYT 105 (151)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---------CCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcH
Confidence 4567888899999999988887333 133322 246889999999999999999999999655 8899
Q ss_pred hHHHHHHHHHcCCChHHHHHHHHHHHhhhhhhh
Q psy1645 80 AYMDVVETSHATESWEDLVRYLQMARKKARESY 112 (143)
Q Consensus 80 ~y~eVie~a~~~~~~e~Lv~yL~MaRk~~ke~~ 112 (143)
.+..+=..-.+.|+|++=+.++..+-+...++.
T Consensus 106 ~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 106 PVFHTGQCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 999998899999999999999999887766554
No 29
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=96.23 E-value=0.062 Score=37.47 Aligned_cols=84 Identities=18% Similarity=0.141 Sum_probs=44.9
Q ss_pred cchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhh-hhhhhHHHHHHHH
Q psy1645 47 NEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKK-ARESYIESELIYA 120 (143)
Q Consensus 47 ~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~-~ke~~idt~Li~a 120 (143)
+.++.|..+|......+...+|++.|-++ +++..+...-......++|+.-+.++..+.+. ...+.+-..+..+
T Consensus 37 ~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~ 116 (184)
T 3vtx_A 37 NNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLV 116 (184)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHH
Confidence 34555555665555555555555555443 33334444444445556666666666555543 2334455556666
Q ss_pred HHhcCChhhH
Q psy1645 121 YARTNRLADL 130 (143)
Q Consensus 121 yAk~~~l~el 130 (143)
|.+.|+..+=
T Consensus 117 ~~~~g~~~~A 126 (184)
T 3vtx_A 117 YDSMGEHDKA 126 (184)
T ss_dssp HHHTTCHHHH
T ss_pred HHHhCCchhH
Confidence 6666665543
No 30
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=96.22 E-value=0.12 Score=39.86 Aligned_cols=87 Identities=16% Similarity=0.072 Sum_probs=67.7
Q ss_pred chhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhhh-hhhhHHHHHHHHH
Q psy1645 48 EPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKKA-RESYIESELIYAY 121 (143)
Q Consensus 48 ~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~-ke~~idt~Li~ay 121 (143)
++.+|..+|......+...+|++.|-++ +++..+..+-....+.|+|++-+.++..+.+.. ..+.+=..|..+|
T Consensus 212 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 291 (365)
T 4eqf_A 212 DPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISC 291 (365)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHH
Confidence 6788888888888888888888888653 667778888888888999999999988877653 3355666788888
Q ss_pred HhcCChhhHHHHh
Q psy1645 122 ARTNRLADLEEFI 134 (143)
Q Consensus 122 Ak~~~l~ele~fl 134 (143)
.+.|+..+-.+++
T Consensus 292 ~~~g~~~~A~~~~ 304 (365)
T 4eqf_A 292 INLGAYREAVSNF 304 (365)
T ss_dssp HHHTCCHHHHHHH
T ss_pred HHCCCHHHHHHHH
Confidence 8888877655444
No 31
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=96.20 E-value=0.06 Score=34.30 Aligned_cols=110 Identities=11% Similarity=0.086 Sum_probs=77.4
Q ss_pred chHHHHHHHHHHHhhCCCHHHHHHH-HHHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CC--
Q psy1645 6 EPATHNALAKIYIDSNNNPERFLKF-FLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DD-- 77 (143)
Q Consensus 6 ~~~~~nalakIyi~~~~~~E~fl~~-~Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~d-- 77 (143)
.+..+..+|.+|...++..++.-.. ..++.. -+.+.+|..+|......+...+|++.|-++ ++
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~---------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~ 73 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELD---------PTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENRE 73 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC---------CccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccch
Confidence 4567889999999999988876222 122221 235678888888887777777777777653 22
Q ss_pred -----cchHHHHHHHHHcCCChHHHHHHHHHHHhhhhhhhHHHHHHHHHHhc
Q psy1645 78 -----PSAYMDVVETSHATESWEDLVRYLQMARKKARESYIESELIYAYART 124 (143)
Q Consensus 78 -----ps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~ke~~idt~Li~ayAk~ 124 (143)
+..+..+-....+.|+|++-+.+++.+.+...++.+-..+.-++.+.
T Consensus 74 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~l~~~~~~~ 125 (131)
T 1elr_A 74 DYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRTPDVLKKCQQAEKIL 125 (131)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 55667777777889999999999999888766666555555555443
No 32
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=96.17 E-value=0.18 Score=36.34 Aligned_cols=128 Identities=8% Similarity=0.058 Sum_probs=85.1
Q ss_pred hHHHHHHHHHHHhhCCCHHHHHHHH-HHHhcc--------------------chhHHHHH-----hcchhHHHHHHHHhh
Q psy1645 7 PATHNALAKIYIDSNNNPERFLKFF-LVDHLS--------------------KTPFYVLR-----CNEPGVWSQLAKAQL 60 (143)
Q Consensus 7 ~~~~nalakIyi~~~~~~E~fl~~~-Li~~~~--------------------~narYa~k-----~~~~~vWs~l~raqL 60 (143)
+..+..+|.+|...++..++.-... .++..+ ++.++..+ .+.+.+|..++....
T Consensus 37 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~ 116 (252)
T 2ho1_A 37 RDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLY 116 (252)
T ss_dssp HHHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHH
Confidence 5678999999999999887763331 111111 11222222 246778888888888
Q ss_pred hhhhhHHHHHHHHhC----CCcc---hHHHHHHHHHcCCChHHHHHHHHHHHhhh-hhhhHHHHHHHHHHhcCChhhHHH
Q psy1645 61 QKGLVKESIDSFIKA----DDPS---AYMDVVETSHATESWEDLVRYLQMARKKA-RESYIESELIYAYARTNRLADLEE 132 (143)
Q Consensus 61 ~~~~V~eAI~sFIkA----~dps---~y~eVie~a~~~~~~e~Lv~yL~MaRk~~-ke~~idt~Li~ayAk~~~l~ele~ 132 (143)
..+...+|++.|-++ .+|. .+..+.....+.|.|++-+.++..+-+.. ..+.+=..|..+|.+.|+..+-.+
T Consensus 117 ~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 196 (252)
T 2ho1_A 117 EQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKEREYVPARQ 196 (252)
T ss_dssp HTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHH
Confidence 888888888888776 3343 34455556667899998888888776653 345566777888888888776554
Q ss_pred Hh
Q psy1645 133 FI 134 (143)
Q Consensus 133 fl 134 (143)
++
T Consensus 197 ~~ 198 (252)
T 2ho1_A 197 YY 198 (252)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 33
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=96.13 E-value=0.13 Score=40.00 Aligned_cols=88 Identities=19% Similarity=0.220 Sum_probs=61.1
Q ss_pred cchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhhh-hhhhHHHHHHHH
Q psy1645 47 NEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKKA-RESYIESELIYA 120 (143)
Q Consensus 47 ~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~-ke~~idt~Li~a 120 (143)
+.+++|..++......+...+|++.|-++ +++..+..+.....+.|++++=+.++..+-+.. ..+..=..|..+
T Consensus 269 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 348 (388)
T 1w3b_A 269 HFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 348 (388)
T ss_dssp SCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 35677878887777777788888777654 566667777777777888888888777665442 234455667778
Q ss_pred HHhcCChhhHHHHh
Q psy1645 121 YARTNRLADLEEFI 134 (143)
Q Consensus 121 yAk~~~l~ele~fl 134 (143)
|.+.|+..+-.+++
T Consensus 349 ~~~~g~~~~A~~~~ 362 (388)
T 1w3b_A 349 LQQQGKLQEALMHY 362 (388)
T ss_dssp HHTTTCCHHHHHHH
T ss_pred HHHcCCHHHHHHHH
Confidence 88888876655443
No 34
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=96.13 E-value=0.22 Score=35.48 Aligned_cols=128 Identities=9% Similarity=0.011 Sum_probs=91.1
Q ss_pred hHHHHHHHHHHHhhCCCHHHHHHH-HHHHhccc------------hhHHH-----HHhcchhHHHHHHHHhhhhhhhHHH
Q psy1645 7 PATHNALAKIYIDSNNNPERFLKF-FLVDHLSK------------TPFYV-----LRCNEPGVWSQLAKAQLQKGLVKES 68 (143)
Q Consensus 7 ~~~~nalakIyi~~~~~~E~fl~~-~Li~~~~~------------narYa-----~k~~~~~vWs~l~raqL~~~~V~eA 68 (143)
+..+..+|.+|...++..++.-.. ..++..+. +.++. ..-+.+.+|..+|......+...+|
T Consensus 79 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A 158 (258)
T 3uq3_A 79 SKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNA 158 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHH
Confidence 578999999999999988887333 12332221 11111 1123567788888888888888899
Q ss_pred HHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhhh-hhhhHHHHHHHHHHhcCChhhHHHHh
Q psy1645 69 IDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKKA-RESYIESELIYAYARTNRLADLEEFI 134 (143)
Q Consensus 69 I~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~-ke~~idt~Li~ayAk~~~l~ele~fl 134 (143)
++.|-++ ++|..+..+-....+.|+|++-++++..+-+.. ..+..=..+..+|.+.|+..+-.+++
T Consensus 159 ~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~ 230 (258)
T 3uq3_A 159 VKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASALETL 230 (258)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 9888665 567778888888888999999999999887653 33455556778888999986655443
No 35
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=95.99 E-value=0.27 Score=35.59 Aligned_cols=94 Identities=12% Similarity=-0.053 Sum_probs=63.9
Q ss_pred chHHHHHHHHHHHhhCCCHHHHHHH-HHHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcc
Q psy1645 6 EPATHNALAKIYIDSNNNPERFLKF-FLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPS 79 (143)
Q Consensus 6 ~~~~~nalakIyi~~~~~~E~fl~~-~Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps 79 (143)
.+..+..+|.+|...++..++.-.+ ..++. .-+.+.+|..+|......+...+|++.|-++ +++.
T Consensus 42 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~---------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~ 112 (275)
T 1xnf_A 42 RAQLLYERGVLYDSLGLRALARNDFSQALAI---------RPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNY 112 (275)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---------CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHc---------CCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccH
Confidence 4667888899999998888876222 12221 1235667777777777777777777777553 4566
Q ss_pred hHHHHHHHHHcCCChHHHHHHHHHHHhhh
Q psy1645 80 AYMDVVETSHATESWEDLVRYLQMARKKA 108 (143)
Q Consensus 80 ~y~eVie~a~~~~~~e~Lv~yL~MaRk~~ 108 (143)
.+..+-....+.|+|++-++++..+.+..
T Consensus 113 ~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 141 (275)
T 1xnf_A 113 AHLNRGIALYYGGRDKLAQDDLLAFYQDD 141 (275)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 66666677777888888888777776543
No 36
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=95.99 E-value=0.17 Score=39.36 Aligned_cols=130 Identities=15% Similarity=0.125 Sum_probs=89.5
Q ss_pred cchHHHHHHHHHHHhhCCCHHHHHHHH-HHHhcc--------------------chhHH---HH--HhcchhHHHHHHHH
Q psy1645 5 TEPATHNALAKIYIDSNNNPERFLKFF-LVDHLS--------------------KTPFY---VL--RCNEPGVWSQLAKA 58 (143)
Q Consensus 5 ~~~~~~nalakIyi~~~~~~E~fl~~~-Li~~~~--------------------~narY---a~--k~~~~~vWs~l~ra 58 (143)
..+..++.+|.+|...++..++.-.+. .++.-+ ++..+ +. .-+.+.+|..+|..
T Consensus 167 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 246 (388)
T 1w3b_A 167 NFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACV 246 (388)
T ss_dssp TCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHH
Confidence 345678888888888887666542221 111111 11111 11 22457888889999
Q ss_pred hhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhh-hhhhhHHHHHHHHHHhcCChhhHHH
Q psy1645 59 QLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKK-ARESYIESELIYAYARTNRLADLEE 132 (143)
Q Consensus 59 qL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~-~ke~~idt~Li~ayAk~~~l~ele~ 132 (143)
....+...+|++.|-++ ++|..+..+.....+.|++++-+.++..+.+. -..+.+=..|..+|.+.|+..+-.+
T Consensus 247 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~ 326 (388)
T 1w3b_A 247 YYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVR 326 (388)
T ss_dssp HHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHcCCHHHHHH
Confidence 88888999999998664 56777888888888899999999999887765 3345555678888999999877665
Q ss_pred Hh
Q psy1645 133 FI 134 (143)
Q Consensus 133 fl 134 (143)
++
T Consensus 327 ~~ 328 (388)
T 1w3b_A 327 LY 328 (388)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 37
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=95.97 E-value=0.21 Score=37.17 Aligned_cols=87 Identities=10% Similarity=0.117 Sum_probs=51.4
Q ss_pred chhHHHHHHHHhhhhhhhHHHHHHHHhC--------CCcchHHHH------------HHHHHcCCChHHHHHHHHHHHhh
Q psy1645 48 EPGVWSQLAKAQLQKGLVKESIDSFIKA--------DDPSAYMDV------------VETSHATESWEDLVRYLQMARKK 107 (143)
Q Consensus 48 ~~~vWs~l~raqL~~~~V~eAI~sFIkA--------~dps~y~eV------------ie~a~~~~~~e~Lv~yL~MaRk~ 107 (143)
.+..|..+|......+...+|++.|-++ +++..+..+ .......|.|++-+.++.-+-+.
T Consensus 70 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 149 (359)
T 3ieg_A 70 FTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEV 149 (359)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHcCChHHHHHHHHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 4566777777777777777777777655 222222222 24445577777777777665543
Q ss_pred -hhhhhHHHHHHHHHHhcCChhhHHHHh
Q psy1645 108 -ARESYIESELIYAYARTNRLADLEEFI 134 (143)
Q Consensus 108 -~ke~~idt~Li~ayAk~~~l~ele~fl 134 (143)
-..+.+=..+..+|.+.|+..+-.+.+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~ 177 (359)
T 3ieg_A 150 CVWDAELRELRAECFIKEGEPRKAISDL 177 (359)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHCCCHHHHHHHH
Confidence 234555556666777777766544443
No 38
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=95.96 E-value=0.16 Score=32.55 Aligned_cols=113 Identities=6% Similarity=-0.000 Sum_probs=81.9
Q ss_pred cchHHHHHHHHHHHhhCCCHHHHHHHHHHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHh-----CCCcc
Q psy1645 5 TEPATHNALAKIYIDSNNNPERFLKFFLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIK-----ADDPS 79 (143)
Q Consensus 5 ~~~~~~nalakIyi~~~~~~E~fl~~~Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIk-----A~dps 79 (143)
..+.-+..+|.+|...++..++. ..+-+.+.. .-+++.+|..+|......+...+|++.|-+ .+++.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~A~--~~~~~al~~------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~ 85 (133)
T 2lni_A 14 DLALMVKNKGNECFQKGDYPQAM--KHYTEAIKR------NPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIK 85 (133)
T ss_dssp CHHHHHHHHHHHHHHTTCSHHHH--HHHHHHHTT------CTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHH--HHHHHHHHc------CCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchH
Confidence 45667888999999999999987 322221111 123578899999998888888888888855 45677
Q ss_pred hHHHHHHHHHcCCChHHHHHHHHHHHhhh-hhhhHHHHHHHHHHhcC
Q psy1645 80 AYMDVVETSHATESWEDLVRYLQMARKKA-RESYIESELIYAYARTN 125 (143)
Q Consensus 80 ~y~eVie~a~~~~~~e~Lv~yL~MaRk~~-ke~~idt~Li~ayAk~~ 125 (143)
.+..+-....+.|+|++-++++..+.+.. ..+.+-..+..+|.+.|
T Consensus 86 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~ 132 (133)
T 2lni_A 86 GYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQY 132 (133)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhc
Confidence 78888888888999999999999887653 34445555555665544
No 39
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=95.88 E-value=0.077 Score=32.93 Aligned_cols=89 Identities=17% Similarity=0.119 Sum_probs=68.7
Q ss_pred cchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhhhh---hhhHHHHHH
Q psy1645 47 NEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKKAR---ESYIESELI 118 (143)
Q Consensus 47 ~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~k---e~~idt~Li 118 (143)
+.+.+|..+|......+...+|+..|-++ +++..+..+-....+.|+|++-+.+++.+-+... .+.+=..+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~ 83 (112)
T 2kck_A 4 QNPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKA 83 (112)
T ss_dssp SSTTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHH
Confidence 45678888888888888888888888653 4566666777777789999999999998877643 466677788
Q ss_pred HHHHhc-CChhhHHHHhc
Q psy1645 119 YAYART-NRLADLEEFIS 135 (143)
Q Consensus 119 ~ayAk~-~~l~ele~fl~ 135 (143)
.+|.+. |+..+-.+++.
T Consensus 84 ~~~~~~~~~~~~A~~~~~ 101 (112)
T 2kck_A 84 DALRYIEGKEVEAEIAEA 101 (112)
T ss_dssp HHHTTCSSCSHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHH
Confidence 889999 99887766653
No 40
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=95.74 E-value=0.4 Score=35.47 Aligned_cols=85 Identities=13% Similarity=0.040 Sum_probs=42.1
Q ss_pred HhcchhHHHHHHHHhhh----hhhhHHHHHHHHhC---CCcchHHHHHHHHHc----CCChHHHHHHHHHHHhhhhhhhH
Q psy1645 45 RCNEPGVWSQLAKAQLQ----KGLVKESIDSFIKA---DDPSAYMDVVETSHA----TESWEDLVRYLQMARKKARESYI 113 (143)
Q Consensus 45 k~~~~~vWs~l~raqL~----~~~V~eAI~sFIkA---~dps~y~eVie~a~~----~~~~e~Lv~yL~MaRk~~ke~~i 113 (143)
+.+.+..|..+|..... .+...+|++.|-+| +++..+..+-....+ .+++++-++|++.+-+. ..+..
T Consensus 106 ~~~~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~-~~~~a 184 (273)
T 1ouv_A 106 DLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDL-KDSPG 184 (273)
T ss_dssp HTTCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-TCHHH
T ss_pred HcCCccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC-CCHHH
Confidence 33455666666655554 44555555555433 344444444333333 55666666666655433 23333
Q ss_pred HHHHHHHHHh----cCChhhH
Q psy1645 114 ESELIYAYAR----TNRLADL 130 (143)
Q Consensus 114 dt~Li~ayAk----~~~l~el 130 (143)
-..|..+|.+ .++..+-
T Consensus 185 ~~~lg~~~~~g~~~~~~~~~A 205 (273)
T 1ouv_A 185 CFNAGNMYHHGEGATKNFKEA 205 (273)
T ss_dssp HHHHHHHHHHTCSSCCCHHHH
T ss_pred HHHHHHHHHcCCCCCccHHHH
Confidence 3344455555 4554443
No 41
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=95.66 E-value=0.38 Score=34.60 Aligned_cols=122 Identities=14% Similarity=0.094 Sum_probs=85.2
Q ss_pred CcchHHHHHHHHHHHhhCCCHHHHHHHH-HHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CC
Q psy1645 4 CTEPATHNALAKIYIDSNNNPERFLKFF-LVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DD 77 (143)
Q Consensus 4 ~~~~~~~nalakIyi~~~~~~E~fl~~~-Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~d 77 (143)
.++|..+...|.+|...+++.++.-.+. .++..+ ..++.+|..+|......+...+|++.|-++ ++
T Consensus 4 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~--------~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~ 75 (228)
T 4i17_A 4 TTDPNQLKNEGNDALNAKNYAVAFEKYSEYLKLTN--------NQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNL 75 (228)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTT--------TCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSH
T ss_pred ccCHHHHHHHHHHHHHccCHHHHHHHHHHHHhccC--------CCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcch
Confidence 4578899999999999999999873331 333222 145678888888888888889999988775 44
Q ss_pred cchHHHHHHHHHcCCChHHHHHHHHHHHhhh-hhhhH-------HHHHHHHHHhcCChhhHHHH
Q psy1645 78 PSAYMDVVETSHATESWEDLVRYLQMARKKA-RESYI-------ESELIYAYARTNRLADLEEF 133 (143)
Q Consensus 78 ps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~-ke~~i-------dt~Li~ayAk~~~l~ele~f 133 (143)
+..+..+-....+.|+|++-+.+++.+-+.. ..+.+ =..+-.+|.+.|+..+=.++
T Consensus 76 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~ 139 (228)
T 4i17_A 76 ANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEEN 139 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHH
Confidence 5556666677778999999999998777653 33423 33344556667776654443
No 42
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=95.64 E-value=0.031 Score=49.03 Aligned_cols=78 Identities=15% Similarity=0.142 Sum_probs=45.9
Q ss_pred hHHHHHHHHhhhhhhhHHHHHHHHhCCCcchHHHHHHHHHcCCChHHHHHHHHHHHhhhhhhhHHHHHHHHHHhcCChhh
Q psy1645 50 GVWSQLAKAQLQKGLVKESIDSFIKADDPSAYMDVVETSHATESWEDLVRYLQMARKKARESYIESELIYAYARTNRLAD 129 (143)
Q Consensus 50 ~vWs~l~raqL~~~~V~eAI~sFIkA~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~ke~~idt~Li~ayAk~~~l~e 129 (143)
+=|.+++.....-|...+||++|-||++|....+|+.+|...|+|+.=...-. +....|.--.+++..|.|.|+..|
T Consensus 149 ~n~~~LA~~L~~Lg~yq~AVea~~KA~~~~~Wk~v~~aCv~~~ef~lA~~~~l---~L~~~ad~l~~lv~~Yek~G~~eE 225 (449)
T 1b89_A 149 SNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQMCGL---HIVVHADELEELINYYQDRGYFEE 225 (449)
T ss_dssp TCHHHHHHHHHTTTCHHHHHHHHHHHTCHHHHHHHHHHHHHTTCHHHHHHTTT---TTTTCHHHHHHHHHHHHHTTCHHH
T ss_pred hhHHHHHHHHHHhccHHHHHHHHHHcCCchhHHHHHHHHHHcCcHHHHHHHHH---HHHhCHhhHHHHHHHHHHCCCHHH
Confidence 45666766666666778888888888888777777777777665543311111 122333333345555555555544
Q ss_pred H
Q psy1645 130 L 130 (143)
Q Consensus 130 l 130 (143)
+
T Consensus 226 a 226 (449)
T 1b89_A 226 L 226 (449)
T ss_dssp H
T ss_pred H
Confidence 4
No 43
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=95.61 E-value=0.21 Score=35.90 Aligned_cols=122 Identities=18% Similarity=0.162 Sum_probs=83.0
Q ss_pred hHHHHHHHHHHHhhCCCHHHHHHHHHHHhccchhHHHHH------hcchhHHHHHHHHhhhhhhhHHHHHHHHhCC----
Q psy1645 7 PATHNALAKIYIDSNNNPERFLKFFLVDHLSKTPFYVLR------CNEPGVWSQLAKAQLQKGLVKESIDSFIKAD---- 76 (143)
Q Consensus 7 ~~~~nalakIyi~~~~~~E~fl~~~Li~~~~~narYa~k------~~~~~vWs~l~raqL~~~~V~eAI~sFIkA~---- 76 (143)
+..+..+|.+|...++..++. ..+ .++.+...+ ...+.+|..+|......+...+|++.|-++-
T Consensus 43 ~~~~~~l~~~~~~~g~~~~A~--~~~----~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 116 (283)
T 3edt_B 43 ATMLNILALVYRDQNKYKEAA--HLL----NDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIRE 116 (283)
T ss_dssp HHHHHHHHHHHHHTTCHHHHH--HHH----HHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHH--HHH----HHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 557888999999999988886 221 122222211 2345578888988888888888888887652
Q ss_pred ------Cc---chHHHHHHHHHcCCChHHHHHHHHHHHhhh---------hhhhHHHHHHHHHHhcCChhhHHHHh
Q psy1645 77 ------DP---SAYMDVVETSHATESWEDLVRYLQMARKKA---------RESYIESELIYAYARTNRLADLEEFI 134 (143)
Q Consensus 77 ------dp---s~y~eVie~a~~~~~~e~Lv~yL~MaRk~~---------ke~~idt~Li~ayAk~~~l~ele~fl 134 (143)
+| ..+..+-......|+|++=+.+++.+-+.. ..+.+=..|..+|.+.|+..+-.+++
T Consensus 117 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 192 (283)
T 3edt_B 117 KVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLY 192 (283)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 23 234555566677999999999988877652 22344556778888999987665554
No 44
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=95.57 E-value=0.48 Score=35.09 Aligned_cols=127 Identities=13% Similarity=0.036 Sum_probs=80.7
Q ss_pred chHHHHHHHHHHHhhCCCHHHHHHHH----------------HHHh----cc---ch---hHHHHHhcchhHHHHHHHHh
Q psy1645 6 EPATHNALAKIYIDSNNNPERFLKFF----------------LVDH----LS---KT---PFYVLRCNEPGVWSQLAKAQ 59 (143)
Q Consensus 6 ~~~~~nalakIyi~~~~~~E~fl~~~----------------Li~~----~~---~n---arYa~k~~~~~vWs~l~raq 59 (143)
++..+..+|.+|...++..++.-.+. +... .+ ++ .+-+.+.+.+..|..+|...
T Consensus 5 ~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~ 84 (273)
T 1ouv_A 5 DPKELVGLGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLY 84 (273)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 45666777788877777666552220 0111 11 11 23344556788888888888
Q ss_pred hh----hhhhHHHHHHHHhC---CCcchHHHHHHHHHc----CCChHHHHHHHHHHHhhhhhhhHHHHHHHHHHh----c
Q psy1645 60 LQ----KGLVKESIDSFIKA---DDPSAYMDVVETSHA----TESWEDLVRYLQMARKKARESYIESELIYAYAR----T 124 (143)
Q Consensus 60 L~----~~~V~eAI~sFIkA---~dps~y~eVie~a~~----~~~~e~Lv~yL~MaRk~~ke~~idt~Li~ayAk----~ 124 (143)
.. .+...+|++.|-+| ++|..+..+-....+ .+++++=+.|++.+-+.. .+..-..|..+|.+ .
T Consensus 85 ~~g~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~-~~~a~~~lg~~~~~~~~~~ 163 (273)
T 1ouv_A 85 YSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN-DGDGCTILGSLYDAGRGTP 163 (273)
T ss_dssp HHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHTSSSC
T ss_pred hCCCCcccCHHHHHHHHHHHHHcCCccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC-cHHHHHHHHHHHHcCCCCC
Confidence 77 67778888877655 667777776666666 788888888888777643 44455566666666 5
Q ss_pred CChhhHHHH
Q psy1645 125 NRLADLEEF 133 (143)
Q Consensus 125 ~~l~ele~f 133 (143)
++..+-.++
T Consensus 164 ~~~~~A~~~ 172 (273)
T 1ouv_A 164 KDLKKALAS 172 (273)
T ss_dssp CCHHHHHHH
T ss_pred CCHHHHHHH
Confidence 665544433
No 45
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=95.56 E-value=0.38 Score=33.90 Aligned_cols=117 Identities=12% Similarity=0.074 Sum_probs=88.0
Q ss_pred hHHHHHHHHHHHhhCCCHHHHHHHHHHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchH
Q psy1645 7 PATHNALAKIYIDSNNNPERFLKFFLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAY 81 (143)
Q Consensus 7 ~~~~nalakIyi~~~~~~E~fl~~~Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y 81 (143)
.--+..+|.+|...+++.++. ..+-+.+. ..+.+|..+|......+...+|++.|-++ +++..+
T Consensus 6 ~~~~~~~g~~~~~~~~~~~A~--~~~~~a~~---------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 74 (213)
T 1hh8_A 6 AISLWNEGVLAADKKDWKGAL--DAFSAVQD---------PHSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAY 74 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHH--HHHHTSSS---------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHH--HHHHHHcC---------CChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHH
Confidence 345678899999999988876 32222211 15789999999999989999999998664 666777
Q ss_pred HHHHHHHHcCCChHHHHHHHHHHHhhhh-----------------hhhHHHHHHHHHHhcCChhhHHHHh
Q psy1645 82 MDVVETSHATESWEDLVRYLQMARKKAR-----------------ESYIESELIYAYARTNRLADLEEFI 134 (143)
Q Consensus 82 ~eVie~a~~~~~~e~Lv~yL~MaRk~~k-----------------e~~idt~Li~ayAk~~~l~ele~fl 134 (143)
..+-....+.|+|++-+.+++.+.+... .+.+=..+..+|.+.|+..+-.+++
T Consensus 75 ~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~ 144 (213)
T 1hh8_A 75 FQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQL 144 (213)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHH
Confidence 7777778889999999999998887432 2255677888899999987655443
No 46
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=95.55 E-value=0.37 Score=40.44 Aligned_cols=122 Identities=14% Similarity=0.103 Sum_probs=90.2
Q ss_pred cchHHHHHHHHHHHhhCCCHHHHHHHHHHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcc
Q psy1645 5 TEPATHNALAKIYIDSNNNPERFLKFFLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPS 79 (143)
Q Consensus 5 ~~~~~~nalakIyi~~~~~~E~fl~~~Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps 79 (143)
.++..+..+|.+|...++..++. ..+-+.+.. .-+.+..|..+|......+...+|++.|-++ +++.
T Consensus 21 ~~~~~~~~lg~~~~~~g~~~~A~--~~~~~al~~------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~ 92 (568)
T 2vsy_A 21 QDFVAWLMLADAELGMGDTTAGE--MAVQRGLAL------HPGHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPG 92 (568)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHH--HHHHHHHTT------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHH--HHHHHHHHh------CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHH
Confidence 35678899999999999988887 221111111 1245778889999988888899999888764 6677
Q ss_pred hHHHHHHHHHcCCChHHHHHHHHHHHhhh-hhhhHHHHHHHHHHhc---CChhhHHHHh
Q psy1645 80 AYMDVVETSHATESWEDLVRYLQMARKKA-RESYIESELIYAYART---NRLADLEEFI 134 (143)
Q Consensus 80 ~y~eVie~a~~~~~~e~Lv~yL~MaRk~~-ke~~idt~Li~ayAk~---~~l~ele~fl 134 (143)
.+..+-....+.|+|++=+.+++.+-+.. ..+..=..|..+|.+. |+..+-.+.+
T Consensus 93 ~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~~~~A~~~~ 151 (568)
T 2vsy_A 93 IALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLCDWRALDVLSAQV 151 (568)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTTHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccHHHHHHHH
Confidence 78888888888999999999998887653 3456667788888888 7776555443
No 47
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=95.54 E-value=0.22 Score=31.12 Aligned_cols=107 Identities=17% Similarity=0.265 Sum_probs=73.7
Q ss_pred hHHHHHHHHHHHhhCCCHHHHHHH-HHHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcch
Q psy1645 7 PATHNALAKIYIDSNNNPERFLKF-FLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSA 80 (143)
Q Consensus 7 ~~~~nalakIyi~~~~~~E~fl~~-~Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~ 80 (143)
...+..+|.+|...++..++.-.. ..++. .-+.+.+|..++......+...+|++.|-++ +++..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~---------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 79 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALEL---------DPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEA 79 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH---------CcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHH
Confidence 457788999999999888776221 12221 1245678888888888888888888888654 56667
Q ss_pred HHHHHHHHHcCCChHHHHHHHHHHHhhh-hhhhHHHHHHHHHH
Q psy1645 81 YMDVVETSHATESWEDLVRYLQMARKKA-RESYIESELIYAYA 122 (143)
Q Consensus 81 y~eVie~a~~~~~~e~Lv~yL~MaRk~~-ke~~idt~Li~ayA 122 (143)
+..+.....+.|+|++-+.++..+.+.. ..+.+-..|..++.
T Consensus 80 ~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 122 (125)
T 1na0_A 80 WYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQ 122 (125)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 7777777888999999999988776542 33444444444443
No 48
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=95.48 E-value=0.32 Score=33.58 Aligned_cols=112 Identities=8% Similarity=0.006 Sum_probs=83.6
Q ss_pred cchHHHHHHHHHHHhhCCCHHHHHHH-HHHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCc
Q psy1645 5 TEPATHNALAKIYIDSNNNPERFLKF-FLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDP 78 (143)
Q Consensus 5 ~~~~~~nalakIyi~~~~~~E~fl~~-~Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dp 78 (143)
.+...+..+|.+|...+++.++.-.+ ..++.- -+.+.+|..+|...+..+...+|++.|-++ +++
T Consensus 9 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~---------p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~ 79 (164)
T 3sz7_A 9 PESDKLKSEGNAAMARKEYSKAIDLYTQALSIA---------PANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYS 79 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS---------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---------CcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH
Confidence 35667889999999999998887222 133322 236789999999999989999999999765 677
Q ss_pred chHHHHHHHHHcCCChHHHHHHHHHHHhhhh---hhhHHHHHHHHHHhcC
Q psy1645 79 SAYMDVVETSHATESWEDLVRYLQMARKKAR---ESYIESELIYAYARTN 125 (143)
Q Consensus 79 s~y~eVie~a~~~~~~e~Lv~yL~MaRk~~k---e~~idt~Li~ayAk~~ 125 (143)
..+..+-....+.|+|++=+.+++.+-+... +.++...+..+..+.+
T Consensus 80 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~ 129 (164)
T 3sz7_A 80 KAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGSDAMKRGLETTKRKIE 129 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHH
Confidence 7888888888889999999999998876532 3335566666655543
No 49
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=95.42 E-value=0.29 Score=39.22 Aligned_cols=88 Identities=8% Similarity=0.066 Sum_probs=69.3
Q ss_pred cchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhhh-hhhhHHHHHHHH
Q psy1645 47 NEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKKA-RESYIESELIYA 120 (143)
Q Consensus 47 ~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~-ke~~idt~Li~a 120 (143)
+.+.+|..+|......+...+|++.|-++ +++..+..+-....+.|+|++-+.++..+.+.. ..+.+=..+..+
T Consensus 308 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 387 (537)
T 3fp2_A 308 EYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVPTFFAEI 387 (537)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 46788888888888888888888888654 667778888888888999999999998887653 456677788888
Q ss_pred HHhcCChhhHHHHh
Q psy1645 121 YARTNRLADLEEFI 134 (143)
Q Consensus 121 yAk~~~l~ele~fl 134 (143)
|.+.|+..+-.+++
T Consensus 388 ~~~~g~~~~A~~~~ 401 (537)
T 3fp2_A 388 LTDRGDFDTAIKQY 401 (537)
T ss_dssp HHHTTCHHHHHHHH
T ss_pred HHHhCCHHHHHHHH
Confidence 89999887755544
No 50
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=95.41 E-value=0.3 Score=35.79 Aligned_cols=122 Identities=10% Similarity=0.038 Sum_probs=81.9
Q ss_pred hHHHHHHHHHHHhhCCCHHHHHHHHHHHhccchhHHHH------HhcchhHHHHHHHHhhhhhhhHHHHHHHHhC-----
Q psy1645 7 PATHNALAKIYIDSNNNPERFLKFFLVDHLSKTPFYVL------RCNEPGVWSQLAKAQLQKGLVKESIDSFIKA----- 75 (143)
Q Consensus 7 ~~~~nalakIyi~~~~~~E~fl~~~Li~~~~~narYa~------k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA----- 75 (143)
...+..+|.+|...++..++.-.. .++.+.+. ......+|..+|......+...+|++.|-++
T Consensus 27 ~~~~~~l~~~~~~~g~~~~A~~~~------~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 100 (311)
T 3nf1_A 27 LRTLHNLVIQYASQGRYEVAVPLC------KQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIRE 100 (311)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHH------HHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHH------HHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 467888999999999988887222 11111111 1233567777888877777777777777664
Q ss_pred ----CC-c---chHHHHHHHHHcCCChHHHHHHHHHHHhhh---------hhhhHHHHHHHHHHhcCChhhHHHHh
Q psy1645 76 ----DD-P---SAYMDVVETSHATESWEDLVRYLQMARKKA---------RESYIESELIYAYARTNRLADLEEFI 134 (143)
Q Consensus 76 ----~d-p---s~y~eVie~a~~~~~~e~Lv~yL~MaRk~~---------ke~~idt~Li~ayAk~~~l~ele~fl 134 (143)
.+ | ..+..+-......|+|++-+.+++.+.+.. ..+.+=..+..+|.+.|+..+-.+++
T Consensus 101 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~ 176 (311)
T 3nf1_A 101 KTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYY 176 (311)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHH
T ss_pred HHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 22 2 234455566677999999999999888763 23344556777888999987665554
No 51
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=95.41 E-value=0.22 Score=30.91 Aligned_cols=83 Identities=10% Similarity=0.034 Sum_probs=42.8
Q ss_pred hhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhhh-hhhhHHHHHHHHHH
Q psy1645 49 PGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKKA-RESYIESELIYAYA 122 (143)
Q Consensus 49 ~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~-ke~~idt~Li~ayA 122 (143)
+..|..+|......+...+|++.|-++ +++..+..+-....+.|.|++-+.++..+-+.. ..+.+=..+..+|.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~ 83 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALE 83 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 445555555555555555555555443 334444444444455566666666665554432 22334445555555
Q ss_pred hcCChhhHH
Q psy1645 123 RTNRLADLE 131 (143)
Q Consensus 123 k~~~l~ele 131 (143)
+.|+..+-.
T Consensus 84 ~~~~~~~A~ 92 (118)
T 1elw_A 84 FLNRFEEAK 92 (118)
T ss_dssp HTTCHHHHH
T ss_pred HHhhHHHHH
Confidence 666554433
No 52
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=95.38 E-value=0.21 Score=31.69 Aligned_cols=87 Identities=11% Similarity=0.114 Sum_probs=66.9
Q ss_pred chhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhhhhh--------hhHH
Q psy1645 48 EPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKKARE--------SYIE 114 (143)
Q Consensus 48 ~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~ke--------~~id 114 (143)
.++.|..+|......+...+|++.|-++ +++..+..+-....+.|+|++-+.++..+-+...+ +.+=
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAY 82 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHH
Confidence 4677888888888888888999888654 55666777777778899999999999988766433 5555
Q ss_pred HHHHHHHHhcCChhhHHHHh
Q psy1645 115 SELIYAYARTNRLADLEEFI 134 (143)
Q Consensus 115 t~Li~ayAk~~~l~ele~fl 134 (143)
..+..+|.+.|+..+-.+++
T Consensus 83 ~~la~~~~~~~~~~~A~~~~ 102 (131)
T 1elr_A 83 ARIGNSYFKEEKYKDAIHFY 102 (131)
T ss_dssp HHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHH
Confidence 67778888999987655554
No 53
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=95.38 E-value=0.32 Score=31.83 Aligned_cols=111 Identities=15% Similarity=0.089 Sum_probs=81.5
Q ss_pred CcchHHHHHHHHHHHhhCCCHHHHHHH-HHHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CC
Q psy1645 4 CTEPATHNALAKIYIDSNNNPERFLKF-FLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DD 77 (143)
Q Consensus 4 ~~~~~~~nalakIyi~~~~~~E~fl~~-~Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~d 77 (143)
...+..+..+|.+|...+++.++.-.+ ..++.. -+.+.+|..+|......+...+|++.|-++ ++
T Consensus 6 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~---------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~ 76 (137)
T 3q49_B 6 SPSAQELKEQGNRLFVGRKYPEAAACYGRAITRN---------PLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQS 76 (137)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred cccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhC---------cCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchh
Confidence 356778899999999999988887333 133322 235788999999888888888888887554 55
Q ss_pred cchHHHHHHHHHcCCChHHHHHHHHHHHhhhhh------hhHHHHHHHHHHh
Q psy1645 78 PSAYMDVVETSHATESWEDLVRYLQMARKKARE------SYIESELIYAYAR 123 (143)
Q Consensus 78 ps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~ke------~~idt~Li~ayAk 123 (143)
+..+..+-......|+|++-+.++..+.+...+ +.|...|..+..+
T Consensus 77 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~~ 128 (137)
T 3q49_B 77 VKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKK 128 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHHH
Confidence 667777777788899999999999988876443 5566666555444
No 54
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=95.38 E-value=0.35 Score=38.29 Aligned_cols=87 Identities=10% Similarity=0.080 Sum_probs=60.7
Q ss_pred chhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhhhhh-hh------HHH
Q psy1645 48 EPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKKARE-SY------IES 115 (143)
Q Consensus 48 ~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~ke-~~------idt 115 (143)
.+..|..++......+...+|++.|-++ ++|..+..+-....+.|+|++-++++..+-+...+ +. +=.
T Consensus 337 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 416 (514)
T 2gw1_A 337 NIFPYIQLACLAYRENKFDDCETLFSEAKRKFPEAPEVPNFFAEILTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLV 416 (514)
T ss_dssp CSHHHHHHHHHTTTTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccchHHHHHHHHH
Confidence 4667888888887777788887777553 56777777777788888888888888877654332 22 555
Q ss_pred HHHHHHHh---cCChhhHHHHh
Q psy1645 116 ELIYAYAR---TNRLADLEEFI 134 (143)
Q Consensus 116 ~Li~ayAk---~~~l~ele~fl 134 (143)
.+..+|.+ .|+..+-.+++
T Consensus 417 ~l~~~~~~~~~~~~~~~A~~~~ 438 (514)
T 2gw1_A 417 GKATLLTRNPTVENFIEATNLL 438 (514)
T ss_dssp HHHHHHHTSCCTTHHHHHHHHH
T ss_pred HHHHHHhhhhhcCCHHHHHHHH
Confidence 67777777 77766554443
No 55
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=95.32 E-value=0.58 Score=34.52 Aligned_cols=88 Identities=9% Similarity=0.091 Sum_probs=65.4
Q ss_pred cchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhhh-hhhhHHHHHHHH
Q psy1645 47 NEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKKA-RESYIESELIYA 120 (143)
Q Consensus 47 ~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~-ke~~idt~Li~a 120 (143)
+.+..|..+|......+...+|++.|-++ +++..+..+-....+.|.|++-+.+++.+.+.. ..+.+=..+..+
T Consensus 123 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~ 202 (330)
T 3hym_B 123 TYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVV 202 (330)
T ss_dssp TCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 35677888888888888888888888664 445566667777777899999888888877653 445666778888
Q ss_pred HHhcCChhhHHHHh
Q psy1645 121 YARTNRLADLEEFI 134 (143)
Q Consensus 121 yAk~~~l~ele~fl 134 (143)
|.+.|+..+-.+++
T Consensus 203 ~~~~~~~~~A~~~~ 216 (330)
T 3hym_B 203 AFQNGEWKTAEKWF 216 (330)
T ss_dssp HHHTTCHHHHHHHH
T ss_pred HHHcccHHHHHHHH
Confidence 88888887655544
No 56
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=95.26 E-value=0.47 Score=33.09 Aligned_cols=94 Identities=14% Similarity=0.056 Sum_probs=74.4
Q ss_pred chHHHHHHHHHHHhhCCCHHHHHHH-HHHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcc
Q psy1645 6 EPATHNALAKIYIDSNNNPERFLKF-FLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPS 79 (143)
Q Consensus 6 ~~~~~nalakIyi~~~~~~E~fl~~-~Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps 79 (143)
++..+..+|.+|...+++.++.-.+ .++.. .-+++..|..+|......+...+|+++|-++ ++|.
T Consensus 20 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~---------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~ 90 (148)
T 2vgx_A 20 TLEQLYSLAFNQYQSGXYEDAHXVFQALCVL---------DHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPR 90 (148)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTH
T ss_pred hHHHHHHHHHHHHHcCChHHHHHHHHHHHHc---------CcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCch
Confidence 4567788999999999998886332 12322 2246788999999998889999999999774 7888
Q ss_pred hHHHHHHHHHcCCChHHHHHHHHHHHhhh
Q psy1645 80 AYMDVVETSHATESWEDLVRYLQMARKKA 108 (143)
Q Consensus 80 ~y~eVie~a~~~~~~e~Lv~yL~MaRk~~ 108 (143)
.+..+-....+.|++++=+.++..+-+..
T Consensus 91 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 119 (148)
T 2vgx_A 91 FPFHAAECLLQXGELAEAESGLFLAQELI 119 (148)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 88888888888999999999998887654
No 57
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=95.12 E-value=0.35 Score=35.29 Aligned_cols=121 Identities=14% Similarity=0.111 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHhhCCCHHHHHHHHHHHhccchhHHHHHhcc----hhHHHHHHHHhhhhhhhHHHHHHHHhC-------C
Q psy1645 8 ATHNALAKIYIDSNNNPERFLKFFLVDHLSKTPFYVLRCNE----PGVWSQLAKAQLQKGLVKESIDSFIKA-------D 76 (143)
Q Consensus 8 ~~~nalakIyi~~~~~~E~fl~~~Li~~~~~narYa~k~~~----~~vWs~l~raqL~~~~V~eAI~sFIkA-------~ 76 (143)
..+..+|.+|...++..++. .. ..++.+...+..+ ...|..+|......+...+|++.|-++ +
T Consensus 184 ~~~~~l~~~~~~~~~~~~A~--~~----~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 257 (338)
T 3ro2_A 184 RAFGNLGNTHYLLGNFRDAV--IA----HEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLK 257 (338)
T ss_dssp HHHHHHHHHHHHHTCHHHHH--HH----HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhCCHHHHH--HH----HHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhc
Confidence 36777888888888877776 22 1222223333332 336777787777777777777666554 3
Q ss_pred C----cchHHHHHHHHHcCCChHHHHHHHHHHHhhhhh-------hhHHHHHHHHHHhcCChhhHHHHh
Q psy1645 77 D----PSAYMDVVETSHATESWEDLVRYLQMARKKARE-------SYIESELIYAYARTNRLADLEEFI 134 (143)
Q Consensus 77 d----ps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~ke-------~~idt~Li~ayAk~~~l~ele~fl 134 (143)
+ +..+..+-......|+|++-+++++.+.+..++ +.+-..|..+|.+.|+..+-.+++
T Consensus 258 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 326 (338)
T 3ro2_A 258 DRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFA 326 (338)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHH
Confidence 3 334555556667799999999999988765432 234446777888888887665554
No 58
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=95.09 E-value=0.4 Score=43.44 Aligned_cols=128 Identities=13% Similarity=0.098 Sum_probs=91.3
Q ss_pred chHHHHHHHHHHHhhCCCHHHHHHHH------------------HHHhccc---h---hHHHHHh--cchhHHHHHHHHh
Q psy1645 6 EPATHNALAKIYIDSNNNPERFLKFF------------------LVDHLSK---T---PFYVLRC--NEPGVWSQLAKAQ 59 (143)
Q Consensus 6 ~~~~~nalakIyi~~~~~~E~fl~~~------------------Li~~~~~---n---arYa~k~--~~~~vWs~l~raq 59 (143)
.+..|+.+|.+|.+.++..||--... +....++ + .+=|.+. +.++.|..+|...
T Consensus 8 ~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l 87 (723)
T 4gyw_A 8 HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTL 87 (723)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 35667888888888888777763331 1111111 1 2223333 4578899999999
Q ss_pred hhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhhh-hhhhHHHHHHHHHHhcCChhhHHHH
Q psy1645 60 LQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKKA-RESYIESELIYAYARTNRLADLEEF 133 (143)
Q Consensus 60 L~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~-ke~~idt~Li~ayAk~~~l~ele~f 133 (143)
...+...+|+++|-+| +++..|..+-....+.|+|++=+.+++.|-+.- ..+..=..|..+|.+.++..+-++.
T Consensus 88 ~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~~~~A~~~ 167 (723)
T 4gyw_A 88 KEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDER 167 (723)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCTTHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhcccHHHHHHH
Confidence 9889999999999654 677778888888888999999999998776643 4556667788899999998776553
No 59
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=95.04 E-value=0.4 Score=31.09 Aligned_cols=122 Identities=14% Similarity=0.091 Sum_probs=76.2
Q ss_pred hHHHHHHHHHHHhhCCCHHHHHHHHHHHhccchhHHHHHhcch----hHHHHHHHHhhhhhhhHHHHHHHHh-------C
Q psy1645 7 PATHNALAKIYIDSNNNPERFLKFFLVDHLSKTPFYVLRCNEP----GVWSQLAKAQLQKGLVKESIDSFIK-------A 75 (143)
Q Consensus 7 ~~~~nalakIyi~~~~~~E~fl~~~Li~~~~~narYa~k~~~~----~vWs~l~raqL~~~~V~eAI~sFIk-------A 75 (143)
..++..+|.+|...++..++. .+ ..++.+.+.+..++ ..|..+|......+...+|++.|-+ .
T Consensus 9 ~~~~~~l~~~~~~~~~~~~A~--~~----~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~ 82 (164)
T 3ro3_A 9 GRAFGNLGNTHYLLGNFRDAV--IA----HEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQL 82 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHH--HH----HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhcCHHHHH--HH----HHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 347889999999999988776 22 12222333333332 3566677776666666666665544 4
Q ss_pred CCcc----hHHHHHHHHHcCCChHHHHHHHHHHHhhhhh-------hhHHHHHHHHHHhcCChhhHHHHh
Q psy1645 76 DDPS----AYMDVVETSHATESWEDLVRYLQMARKKARE-------SYIESELIYAYARTNRLADLEEFI 134 (143)
Q Consensus 76 ~dps----~y~eVie~a~~~~~~e~Lv~yL~MaRk~~ke-------~~idt~Li~ayAk~~~l~ele~fl 134 (143)
++|. .+..+-......|+|++-+++++.+-+..++ +.+=..|..+|.+.|+..+-.+++
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 152 (164)
T 3ro3_A 83 KDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFA 152 (164)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHH
Confidence 4433 3444445556789999999999888765432 233445666777888877655554
No 60
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=95.03 E-value=0.34 Score=36.96 Aligned_cols=121 Identities=14% Similarity=0.111 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHhhCCCHHHHHHHHHHHhccchhHHHHHhcc----hhHHHHHHHHhhhhhhhHHHHHHHHhC-------C
Q psy1645 8 ATHNALAKIYIDSNNNPERFLKFFLVDHLSKTPFYVLRCNE----PGVWSQLAKAQLQKGLVKESIDSFIKA-------D 76 (143)
Q Consensus 8 ~~~nalakIyi~~~~~~E~fl~~~Li~~~~~narYa~k~~~----~~vWs~l~raqL~~~~V~eAI~sFIkA-------~ 76 (143)
..+..+|.+|...++..++. .. ..++.+...+..+ ...|..+|......+...+|++.|-++ +
T Consensus 188 ~~~~~la~~~~~~g~~~~A~--~~----~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 261 (406)
T 3sf4_A 188 RAFGNLGNTHYLLGNFRDAV--IA----HEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLK 261 (406)
T ss_dssp HHHHHHHHHHHHHTBHHHHH--HH----HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHccCHHHHH--HH----HHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCc
Confidence 36778888898888887776 21 1222222222222 336667777777777777777766554 3
Q ss_pred C----cchHHHHHHHHHcCCChHHHHHHHHHHHhhhhh-------hhHHHHHHHHHHhcCChhhHHHHh
Q psy1645 77 D----PSAYMDVVETSHATESWEDLVRYLQMARKKARE-------SYIESELIYAYARTNRLADLEEFI 134 (143)
Q Consensus 77 d----ps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~ke-------~~idt~Li~ayAk~~~l~ele~fl 134 (143)
+ +..+..+-....+.|+|++-+++++.+.+..++ +.+=..|..+|.+.|+..+-.+++
T Consensus 262 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 330 (406)
T 3sf4_A 262 DRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFA 330 (406)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 3 234455556666789999999998888765433 334456777788888876655443
No 61
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=95.03 E-value=0.72 Score=33.96 Aligned_cols=88 Identities=9% Similarity=0.047 Sum_probs=68.1
Q ss_pred cchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhhh-hhhhHHHHHHHH
Q psy1645 47 NEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKKA-RESYIESELIYA 120 (143)
Q Consensus 47 ~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~-ke~~idt~Li~a 120 (143)
+.+.+|..+|......+...+|++.|-++ +++..+..+.....+.|+|++-+.+++.+.+.. ..+.+=..+..+
T Consensus 170 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~ 249 (327)
T 3cv0_A 170 NDAQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVS 249 (327)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 35778888888888888888888888654 566777788888888999999999998877653 345666778888
Q ss_pred HHhcCChhhHHHHh
Q psy1645 121 YARTNRLADLEEFI 134 (143)
Q Consensus 121 yAk~~~l~ele~fl 134 (143)
|.+.|+..+-.+++
T Consensus 250 ~~~~g~~~~A~~~~ 263 (327)
T 3cv0_A 250 YSNMSQYDLAAKQL 263 (327)
T ss_dssp HHHTTCHHHHHHHH
T ss_pred HHHhccHHHHHHHH
Confidence 99999987655544
No 62
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=95.00 E-value=0.5 Score=34.28 Aligned_cols=119 Identities=10% Similarity=0.035 Sum_probs=79.4
Q ss_pred hHHHHHHHHHHHhhCCCHHHHHHH-HHHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhC----CCcch-
Q psy1645 7 PATHNALAKIYIDSNNNPERFLKF-FLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKA----DDPSA- 80 (143)
Q Consensus 7 ~~~~nalakIyi~~~~~~E~fl~~-~Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA----~dps~- 80 (143)
+......|.+|...++..++.-.. ..++.- -+.+..|..+|......+...+|++.|-++ ++|..
T Consensus 3 ~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~---------p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 73 (272)
T 3u4t_A 3 DDVEFRYADFLFKNNNYAEAIEVFNKLEAKK---------YNSPYIYNRRAVCYYELAKYDLAQKDIETYFSKVNATKAK 73 (272)
T ss_dssp --CHHHHHHHHHTTTCHHHHHHHHHHHHHTT---------CCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHTTSCTTTCC
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC---------CCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccCchhHH
Confidence 445567788888888877776222 122211 134567888888877777788888777654 44444
Q ss_pred ---HHHHHHHHHcCCChHHHHHHHHHHHhh-hhhhhHHHHHHHHHHhcCChhhHHHHh
Q psy1645 81 ---YMDVVETSHATESWEDLVRYLQMARKK-ARESYIESELIYAYARTNRLADLEEFI 134 (143)
Q Consensus 81 ---y~eVie~a~~~~~~e~Lv~yL~MaRk~-~ke~~idt~Li~ayAk~~~l~ele~fl 134 (143)
|..+-....+.|+|++=++++..+-+. ...+.+=..+..+|.+.|+..+-.+++
T Consensus 74 ~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~ 131 (272)
T 3u4t_A 74 SADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYM 131 (272)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHH
Confidence 666667777788888888888877764 344556667777888888877665554
No 63
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=94.87 E-value=0.47 Score=36.93 Aligned_cols=72 Identities=13% Similarity=0.107 Sum_probs=36.2
Q ss_pred hhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhh-hhhhhHHHHHHHHHHhcCChhh-HHHHh
Q psy1645 63 GLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKK-ARESYIESELIYAYARTNRLAD-LEEFI 134 (143)
Q Consensus 63 ~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~-~ke~~idt~Li~ayAk~~~l~e-le~fl 134 (143)
+...+|++.|=++ ++|.-+..+-....+.|+|++=+.+|+-+=+. -..|..=..|+.+|...|+..+ .++++
T Consensus 180 ~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~~~~ 258 (291)
T 3mkr_A 180 EKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVTNRYL 258 (291)
T ss_dssp THHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 4455555555332 33444444444555566666666666544332 2334444455566666666543 44443
No 64
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=94.71 E-value=1.2 Score=34.88 Aligned_cols=130 Identities=5% Similarity=-0.015 Sum_probs=83.0
Q ss_pred cchHHHHHHHHHHHhhCCCHHHHHHH-HHHHhccch---hHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhC-----
Q psy1645 5 TEPATHNALAKIYIDSNNNPERFLKF-FLVDHLSKT---PFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKA----- 75 (143)
Q Consensus 5 ~~~~~~nalakIyi~~~~~~E~fl~~-~Li~~~~~n---arYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA----- 75 (143)
.++..+..+|.+|...++..++.-.. ..++..+.+ ............+..++......+...+|++.|-++
T Consensus 209 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p 288 (450)
T 2y4t_A 209 DNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEP 288 (450)
T ss_dssp SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC
Confidence 45778999999999999988887333 133332222 111112222222233367777777888888888665
Q ss_pred CCcc----hHHHHHHHHHcCCChHHHHHHHHHHHhh-hhhhhHHHHHHHHHHhcCChhhHHHHh
Q psy1645 76 DDPS----AYMDVVETSHATESWEDLVRYLQMARKK-ARESYIESELIYAYARTNRLADLEEFI 134 (143)
Q Consensus 76 ~dps----~y~eVie~a~~~~~~e~Lv~yL~MaRk~-~ke~~idt~Li~ayAk~~~l~ele~fl 134 (143)
++|. .+..+.....+.|+|++-+.+++.+-+. -..+.+=..+..+|.+.|+..+-.+.+
T Consensus 289 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~ 352 (450)
T 2y4t_A 289 SIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDY 352 (450)
T ss_dssp SSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 3322 4666677778889999998888877654 335566677888888888876644443
No 65
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=94.56 E-value=0.55 Score=34.36 Aligned_cols=122 Identities=18% Similarity=0.183 Sum_probs=80.4
Q ss_pred hHHHHHHHHHHHhhCCCHHHHHHHHHHHhccchhHHHHH------hcchhHHHHHHHHhhhhhhhHHHHHHHHhCC----
Q psy1645 7 PATHNALAKIYIDSNNNPERFLKFFLVDHLSKTPFYVLR------CNEPGVWSQLAKAQLQKGLVKESIDSFIKAD---- 76 (143)
Q Consensus 7 ~~~~nalakIyi~~~~~~E~fl~~~Li~~~~~narYa~k------~~~~~vWs~l~raqL~~~~V~eAI~sFIkA~---- 76 (143)
...+..+|.+|...++..++. ..+ .++.+...+ .....+|..+|......+...+|++.|-++-
T Consensus 69 ~~~~~~la~~~~~~g~~~~A~--~~~----~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 142 (311)
T 3nf1_A 69 ATMLNILALVYRDQNKYKDAA--NLL----NDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIRE 142 (311)
T ss_dssp HHHHHHHHHHHHHTTCHHHHH--HHH----HHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHH--HHH----HHHHHHHHHHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHH
Confidence 456788999999999888876 221 122222221 2235567778888777777777777776542
Q ss_pred -----C-cc---hHHHHHHHHHcCCChHHHHHHHHHHHhhh---------hhhhHHHHHHHHHHhcCChhhHHHHh
Q psy1645 77 -----D-PS---AYMDVVETSHATESWEDLVRYLQMARKKA---------RESYIESELIYAYARTNRLADLEEFI 134 (143)
Q Consensus 77 -----d-ps---~y~eVie~a~~~~~~e~Lv~yL~MaRk~~---------ke~~idt~Li~ayAk~~~l~ele~fl 134 (143)
+ |. .+..+-......|+|++-+.+++.+.+.. ..+.+-..|..+|.+.|+..+-.+++
T Consensus 143 ~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 218 (311)
T 3nf1_A 143 KVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLY 218 (311)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 2 22 24455556667999999999999887652 23344566778888999987765554
No 66
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=94.52 E-value=0.69 Score=31.35 Aligned_cols=95 Identities=14% Similarity=0.072 Sum_probs=74.6
Q ss_pred chHHHHHHHHHHHhhCCCHHHHHHH-HHHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHh-----CCCcc
Q psy1645 6 EPATHNALAKIYIDSNNNPERFLKF-FLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIK-----ADDPS 79 (143)
Q Consensus 6 ~~~~~nalakIyi~~~~~~E~fl~~-~Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIk-----A~dps 79 (143)
++..+..+|.+|...+++.++.-.+ .++.. .-+++.+|..+|......+...+|++.|-+ .++|.
T Consensus 17 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~---------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~ 87 (142)
T 2xcb_A 17 TLEQLYALGFNQYQAGKWDDAQKIFQALCML---------DHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPR 87 (142)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTH
T ss_pred HHHHHHHHHHHHHHHccHHHHHHHHHHHHHh---------CCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcH
Confidence 4556778899999999988886222 12221 224678899999999988999999999966 57888
Q ss_pred hHHHHHHHHHcCCChHHHHHHHHHHHhhhh
Q psy1645 80 AYMDVVETSHATESWEDLVRYLQMARKKAR 109 (143)
Q Consensus 80 ~y~eVie~a~~~~~~e~Lv~yL~MaRk~~k 109 (143)
.+..+-......|+|++=++++..+.+...
T Consensus 88 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 117 (142)
T 2xcb_A 88 FPFHAAECHLQLGDLDGAESGFYSARALAA 117 (142)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 888888888899999999999998887643
No 67
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=94.41 E-value=0.58 Score=36.26 Aligned_cols=121 Identities=9% Similarity=0.053 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHhhCCCHHHHHHHHHHHhccchhHHHHHhcc----hhHHHHHHHHhhhhhhhHHHHHHHHhC-------C
Q psy1645 8 ATHNALAKIYIDSNNNPERFLKFFLVDHLSKTPFYVLRCNE----PGVWSQLAKAQLQKGLVKESIDSFIKA-------D 76 (143)
Q Consensus 8 ~~~nalakIyi~~~~~~E~fl~~~Li~~~~~narYa~k~~~----~~vWs~l~raqL~~~~V~eAI~sFIkA-------~ 76 (143)
..+..+|.+|...+++.++. .++- ++.+...+..+ ...|..+|...+..+...+|++.|-++ +
T Consensus 224 ~~~~~la~~~~~~g~~~~A~--~~~~----~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 297 (411)
T 4a1s_A 224 RACGNLGNTYYLLGDFQAAI--EHHQ----ERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELG 297 (411)
T ss_dssp HHHHHHHHHHHHTTCHHHHH--HHHH----HHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCChHHHH--HHHH----HHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcC
Confidence 47788899999999888876 3221 22222222222 347777888888877777777766544 2
Q ss_pred C----cchHHHHHHHHHcCCChHHHHHHHHHHHhhhhh-------hhHHHHHHHHHHhcCChhhHHHHh
Q psy1645 77 D----PSAYMDVVETSHATESWEDLVRYLQMARKKARE-------SYIESELIYAYARTNRLADLEEFI 134 (143)
Q Consensus 77 d----ps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~ke-------~~idt~Li~ayAk~~~l~ele~fl 134 (143)
+ +..+..+-....+.|+|++=+.|++.+.+..++ +.+=..|..+|.+.|+..+-.+++
T Consensus 298 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 366 (411)
T 4a1s_A 298 EREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQELGDRIGEARACWSLGNAHSAIGGHERALKYA 366 (411)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 2 344556666677799999999999887765332 224445677888888887655443
No 68
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=94.35 E-value=0.6 Score=35.81 Aligned_cols=121 Identities=7% Similarity=-0.018 Sum_probs=73.2
Q ss_pred HHHHHHHHHHHhhCCCHHHHHHHHHHHhccchhHHHHHhcc----hhHHHHHHHHhhhh-hhhHHHHHHHHhC-------
Q psy1645 8 ATHNALAKIYIDSNNNPERFLKFFLVDHLSKTPFYVLRCNE----PGVWSQLAKAQLQK-GLVKESIDSFIKA------- 75 (143)
Q Consensus 8 ~~~nalakIyi~~~~~~E~fl~~~Li~~~~~narYa~k~~~----~~vWs~l~raqL~~-~~V~eAI~sFIkA------- 75 (143)
..|+.+|.+|...+++.++. . ...++.+...+..+ ...|..+|...... +...+|++.|-+|
T Consensus 78 ~~~~~lg~~~~~~g~~~~A~--~----~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~ 151 (292)
T 1qqe_A 78 NTYVEAYKCFKSGGNSVNAV--D----SLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQD 151 (292)
T ss_dssp HHHHHHHHHHHHTTCHHHHH--H----HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCCHHHHH--H----HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhC
Confidence 35566666666666666654 1 11122222222222 34677788877775 7777777777654
Q ss_pred CC----cchHHHHHHHHHcCCChHHHHHHHHHHHhhhhhhh--------HHHHHHHHHHhcCChhhHHHHh
Q psy1645 76 DD----PSAYMDVVETSHATESWEDLVRYLQMARKKARESY--------IESELIYAYARTNRLADLEEFI 134 (143)
Q Consensus 76 ~d----ps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~ke~~--------idt~Li~ayAk~~~l~ele~fl 134 (143)
++ +..+..+-....+.|+|++=+.+++.+-+...+.. .=..+..||.+.|+..+-...+
T Consensus 152 ~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~ 222 (292)
T 1qqe_A 152 QSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTL 222 (292)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 22 23466666777789999999999998876543321 1134567788888876544433
No 69
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=94.32 E-value=0.56 Score=29.48 Aligned_cols=88 Identities=10% Similarity=0.046 Sum_probs=67.8
Q ss_pred cchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhhh-hhhhHHHHHHHH
Q psy1645 47 NEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKKA-RESYIESELIYA 120 (143)
Q Consensus 47 ~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~-ke~~idt~Li~a 120 (143)
+++..|..+|......+...+|++.|-++ +++..+..+-......|+|++-+.++..+-+.. ..+.+=..+..+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~ 89 (131)
T 2vyi_A 10 AEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLA 89 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHH
Confidence 45677888888888888888888888664 456677777777888999999999999887653 345566677778
Q ss_pred HHhcCChhhHHHHh
Q psy1645 121 YARTNRLADLEEFI 134 (143)
Q Consensus 121 yAk~~~l~ele~fl 134 (143)
|.+.|+..+-.+++
T Consensus 90 ~~~~~~~~~A~~~~ 103 (131)
T 2vyi_A 90 LSSLNKHVEAVAYY 103 (131)
T ss_dssp HHHTTCHHHHHHHH
T ss_pred HHHhCCHHHHHHHH
Confidence 89999987765554
No 70
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=94.31 E-value=0.54 Score=29.29 Aligned_cols=87 Identities=18% Similarity=0.308 Sum_probs=66.7
Q ss_pred chhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhh-hhhhhHHHHHHHHH
Q psy1645 48 EPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKK-ARESYIESELIYAY 121 (143)
Q Consensus 48 ~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~-~ke~~idt~Li~ay 121 (143)
.+..|..++......+...+|++.|-++ +++..+..+.....+.|.|++-++++..+.+. ...+.+-..+..+|
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 87 (125)
T 1na0_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAY 87 (125)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHH
Confidence 3567888888888888888888888654 45666777777888899999999999877654 34555666788889
Q ss_pred HhcCChhhHHHHh
Q psy1645 122 ARTNRLADLEEFI 134 (143)
Q Consensus 122 Ak~~~l~ele~fl 134 (143)
.+.|+..+-.+++
T Consensus 88 ~~~~~~~~A~~~~ 100 (125)
T 1na0_A 88 YKQGDYDEAIEYY 100 (125)
T ss_dssp HHTTCHHHHHHHH
T ss_pred HHhcCHHHHHHHH
Confidence 9999987665544
No 71
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=94.29 E-value=0.66 Score=30.23 Aligned_cols=88 Identities=7% Similarity=-0.109 Sum_probs=70.6
Q ss_pred cchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhhh-hhhhHHHHHHHH
Q psy1645 47 NEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKKA-RESYIESELIYA 120 (143)
Q Consensus 47 ~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~-ke~~idt~Li~a 120 (143)
..+..|..+|......+...+|+..|-++ +++..+..+-......|+|++-+.++..+-+.. ..+..=..+..+
T Consensus 7 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 86 (137)
T 3q49_B 7 PSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQC 86 (137)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHH
Confidence 56788999999999999999999988664 556677778888888999999999999887753 345666778888
Q ss_pred HHhcCChhhHHHHh
Q psy1645 121 YARTNRLADLEEFI 134 (143)
Q Consensus 121 yAk~~~l~ele~fl 134 (143)
|.+.|+..+-.+++
T Consensus 87 ~~~~~~~~~A~~~~ 100 (137)
T 3q49_B 87 QLEMESYDEAIANL 100 (137)
T ss_dssp HHHTTCHHHHHHHH
T ss_pred HHHHhhHHHHHHHH
Confidence 99999987655544
No 72
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=94.29 E-value=0.42 Score=39.88 Aligned_cols=21 Identities=14% Similarity=0.272 Sum_probs=12.5
Q ss_pred hHHHHHHHHHHHhhCCCHHHH
Q psy1645 7 PATHNALAKIYIDSNNNPERF 27 (143)
Q Consensus 7 ~~~~nalakIyi~~~~~~E~f 27 (143)
+..+..+|.+|...++..++.
T Consensus 137 ~~a~~~lg~~~~~~g~~~~A~ 157 (474)
T 4abn_A 137 VEAWNQLGEVYWKKGDVTSAH 157 (474)
T ss_dssp HHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHH
Confidence 455666666666666655554
No 73
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=94.19 E-value=0.94 Score=40.98 Aligned_cols=88 Identities=15% Similarity=0.112 Sum_probs=70.1
Q ss_pred cchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhh-hhhhhHHHHHHHH
Q psy1645 47 NEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKK-ARESYIESELIYA 120 (143)
Q Consensus 47 ~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~-~ke~~idt~Li~a 120 (143)
+.++.|..+|......+...+|++.|-+| +++..|..+=....+.|+|++=+.+++.|=+. -..+..=..|..+
T Consensus 41 ~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~ 120 (723)
T 4gyw_A 41 EFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASI 120 (723)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 56788999999999999999999999665 77888888888888999999999888876553 2344455677888
Q ss_pred HHhcCChhhHHHHh
Q psy1645 121 YARTNRLADLEEFI 134 (143)
Q Consensus 121 yAk~~~l~ele~fl 134 (143)
|.+.|++.+=.+..
T Consensus 121 ~~~~g~~~eAi~~~ 134 (723)
T 4gyw_A 121 HKDSGNIPEAIASY 134 (723)
T ss_dssp HHHTTCHHHHHHHH
T ss_pred HHHcCCHHHHHHHH
Confidence 99999987755543
No 74
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=94.12 E-value=0.63 Score=36.80 Aligned_cols=129 Identities=9% Similarity=0.066 Sum_probs=87.0
Q ss_pred chHHHHHHHHHHHhhCCCHHHHHHHH-HHHhc----------------c---chhHHHHH-----hcchhHHHHHHHHhh
Q psy1645 6 EPATHNALAKIYIDSNNNPERFLKFF-LVDHL----------------S---KTPFYVLR-----CNEPGVWSQLAKAQL 60 (143)
Q Consensus 6 ~~~~~nalakIyi~~~~~~E~fl~~~-Li~~~----------------~---~narYa~k-----~~~~~vWs~l~raqL 60 (143)
.+..+..+|.+|...++..++.-... .++.. + ++.++..+ .+.+.+|..++....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 315 (514)
T 2gw1_A 236 LAISLEHTGIFKFLKNDPLGAHEDIKKAIELFPRVNSYIYMALIMADRNDSTEYYNYFDKALKLDSNNSSVYYHRGQMNF 315 (514)
T ss_dssp HHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHTSSCCTTGGGHHHHHHTTCTTCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCccHHHHHHHHHHHHHCCCHHHHHHHHHHHhhcCcCCHHHHHHHHHHHH
Confidence 35567777777777777666542221 11110 0 12222222 245778888888888
Q ss_pred hhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhhh-hhhhHHHHHHHHHHhcCChhhHHHHh
Q psy1645 61 QKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKKA-RESYIESELIYAYARTNRLADLEEFI 134 (143)
Q Consensus 61 ~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~-ke~~idt~Li~ayAk~~~l~ele~fl 134 (143)
..+...+|++.|-++ +++..+..+.....+.|.|++-+.++..+.+.. ..+.+=..+..+|.+.|+..+-..++
T Consensus 316 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~ 395 (514)
T 2gw1_A 316 ILQNYDQAGKDFDKAKELDPENIFPYIQLACLAYRENKFDDCETLFSEAKRKFPEAPEVPNFFAEILTDKNDFDKALKQY 395 (514)
T ss_dssp HTTCTTHHHHHHHHHHHTCSSCSHHHHHHHHHTTTTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 888888888888664 456677777777888999999999998887653 35666677888899999987655544
No 75
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=94.11 E-value=1.6 Score=33.90 Aligned_cols=116 Identities=14% Similarity=0.064 Sum_probs=58.7
Q ss_pred chHHHHHHHHHHHhhCCCHHHHHHHHHHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhCC--CcchH-H
Q psy1645 6 EPATHNALAKIYIDSNNNPERFLKFFLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKAD--DPSAY-M 82 (143)
Q Consensus 6 ~~~~~nalakIyi~~~~~~E~fl~~~Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA~--dps~y-~ 82 (143)
.+.++..+|.+|...++..++. ..+ .+ -+.++.|..+++..+..|+..+|++.|=++- +|... .
T Consensus 100 ~~~~~~~la~~~~~~g~~~~Al--~~l----~~-------~~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~~~~ 166 (291)
T 3mkr_A 100 NTTFLLMAASIYFYDQNPDAAL--RTL----HQ-------GDSLECMAMTVQILLKLDRLDLARKELKKMQDQDEDATLT 166 (291)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHH--HHH----TT-------CCSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHH--HHH----hC-------CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCcHHH
Confidence 4556666677777666666665 111 11 3555666666666555566666665554431 23321 1
Q ss_pred H----HHHHHHcCCChHHHHHHHHHHHhh-hhhhhHHHHHHHHHHhcCChhhHHHHh
Q psy1645 83 D----VVETSHATESWEDLVRYLQMARKK-ARESYIESELIYAYARTNRLADLEEFI 134 (143)
Q Consensus 83 e----Vie~a~~~~~~e~Lv~yL~MaRk~-~ke~~idt~Li~ayAk~~~l~ele~fl 134 (143)
. .+......|+|++=+..++.+-+. -..+.+=..+..+|.+.|+..+-++.+
T Consensus 167 ~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~~~eA~~~l 223 (291)
T 3mkr_A 167 QLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGVL 223 (291)
T ss_dssp HHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 1 122233346666655555544332 223333444555666666666555544
No 76
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=94.05 E-value=0.72 Score=30.10 Aligned_cols=60 Identities=23% Similarity=0.204 Sum_probs=32.4
Q ss_pred chhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhh
Q psy1645 48 EPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKK 107 (143)
Q Consensus 48 ~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~ 107 (143)
.+.+|..+|......+...+|++.|-++ +++..+..+-......|+|++=+.+++.+-+.
T Consensus 37 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~ 101 (126)
T 3upv_A 37 DARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASALETLDAARTK 101 (126)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhCHHHHHHHHHHHHHh
Confidence 4555666665555555555555555432 34444455555555566666655555555443
No 77
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=93.92 E-value=0.66 Score=32.31 Aligned_cols=87 Identities=14% Similarity=0.087 Sum_probs=69.2
Q ss_pred chhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhh-hhhhhHHHHHHHHH
Q psy1645 48 EPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKK-ARESYIESELIYAY 121 (143)
Q Consensus 48 ~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~-~ke~~idt~Li~ay 121 (143)
+++.|..+|...+..+...+|+..|-++ ++|..+..+-....+.|+|++=+.++..+-+. -..|..=-.+..+|
T Consensus 20 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~ 99 (148)
T 2vgx_A 20 TLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECL 99 (148)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHHHH
Confidence 4567888899999999999999999764 56666777777778899999999999988765 35666777788899
Q ss_pred HhcCChhhHHHHh
Q psy1645 122 ARTNRLADLEEFI 134 (143)
Q Consensus 122 Ak~~~l~ele~fl 134 (143)
.+.|+..+=.+++
T Consensus 100 ~~~g~~~~A~~~~ 112 (148)
T 2vgx_A 100 LQXGELAEAESGL 112 (148)
T ss_dssp HHTTCHHHHHHHH
T ss_pred HHcCCHHHHHHHH
Confidence 9999987755443
No 78
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=93.90 E-value=0.58 Score=33.79 Aligned_cols=88 Identities=10% Similarity=-0.000 Sum_probs=72.9
Q ss_pred cchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhhh-hhhhHHHHHHHH
Q psy1645 47 NEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKKA-RESYIESELIYA 120 (143)
Q Consensus 47 ~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~-ke~~idt~Li~a 120 (143)
+.+.+|..+|......+...+|++.|-++ +++..+..+-....+.|+|++=++++..+-+.. ..+.+=..+..+
T Consensus 41 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~ 120 (275)
T 1xnf_A 41 ERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIA 120 (275)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHHH
Confidence 45788999999999999999999999764 677888888888889999999999999888753 356667788889
Q ss_pred HHhcCChhhHHHHh
Q psy1645 121 YARTNRLADLEEFI 134 (143)
Q Consensus 121 yAk~~~l~ele~fl 134 (143)
|.+.|+..+-.+++
T Consensus 121 ~~~~g~~~~A~~~~ 134 (275)
T 1xnf_A 121 LYYGGRDKLAQDDL 134 (275)
T ss_dssp HHHTTCHHHHHHHH
T ss_pred HHHhccHHHHHHHH
Confidence 99999987765554
No 79
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=93.87 E-value=0.8 Score=32.86 Aligned_cols=89 Identities=10% Similarity=0.118 Sum_probs=71.2
Q ss_pred hcchhHHHHHHHHhhhhhhhHHHHHHHHhC------CCcchHHHHHHHHHcCCChHHHHHHHHHHHhhh-hhhhHHHHHH
Q psy1645 46 CNEPGVWSQLAKAQLQKGLVKESIDSFIKA------DDPSAYMDVVETSHATESWEDLVRYLQMARKKA-RESYIESELI 118 (143)
Q Consensus 46 ~~~~~vWs~l~raqL~~~~V~eAI~sFIkA------~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~-ke~~idt~Li 118 (143)
..+|+.|...|...+..+...+|++.|-++ .++..+..+-....+.|+|++-++++..+-+.. ..+.+=..+.
T Consensus 4 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~ 83 (228)
T 4i17_A 4 TTDPNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKS 83 (228)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHH
Confidence 357899999999999999999999998764 566667777777778999999999999887653 4556666788
Q ss_pred HHHHhcCChhhHHHHh
Q psy1645 119 YAYARTNRLADLEEFI 134 (143)
Q Consensus 119 ~ayAk~~~l~ele~fl 134 (143)
.+|.+.|+..+-.+.+
T Consensus 84 ~~~~~~~~~~~A~~~~ 99 (228)
T 4i17_A 84 AAYRDMKNNQEYIATL 99 (228)
T ss_dssp HHHHHTTCHHHHHHHH
T ss_pred HHHHHcccHHHHHHHH
Confidence 8899999987765554
No 80
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=93.85 E-value=1.2 Score=35.65 Aligned_cols=117 Identities=15% Similarity=0.135 Sum_probs=85.9
Q ss_pred HHHHHHHHHHhhCCCHHHHHHH-HHHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHH
Q psy1645 9 THNALAKIYIDSNNNPERFLKF-FLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYM 82 (143)
Q Consensus 9 ~~nalakIyi~~~~~~E~fl~~-~Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~ 82 (143)
.+..+|.+|...++..++.-.. ..++ ...++..|..+|......+...+|++.|-++ ++|..+.
T Consensus 245 ~~~~~g~~~~~~~~~~~A~~~~~~~~~----------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 314 (537)
T 3fp2_A 245 ALCYTGIFHFLKNNLLDAQVLLQESIN----------LHPTPNSYIFLALTLADKENSQEFFKFFQKAVDLNPEYPPTYY 314 (537)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH----------HCCCHHHHHHHHHHTCCSSCCHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHh----------cCCCchHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHH
Confidence 4556667777777666655111 1111 1223688889999999888899999988764 6777888
Q ss_pred HHHHHHHcCCChHHHHHHHHHHHhhh-hhhhHHHHHHHHHHhcCChhhHHHHhc
Q psy1645 83 DVVETSHATESWEDLVRYLQMARKKA-RESYIESELIYAYARTNRLADLEEFIS 135 (143)
Q Consensus 83 eVie~a~~~~~~e~Lv~yL~MaRk~~-ke~~idt~Li~ayAk~~~l~ele~fl~ 135 (143)
.+-....+.|+|++-+.++..+.+.. ..+.+=..+..+|.+.|+..+-.+++.
T Consensus 315 ~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 368 (537)
T 3fp2_A 315 HRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEAFFN 368 (537)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 88888889999999999999887653 456677788899999999887666553
No 81
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=93.84 E-value=0.77 Score=31.10 Aligned_cols=87 Identities=11% Similarity=0.035 Sum_probs=68.8
Q ss_pred chhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhh-hhhhhHHHHHHHHH
Q psy1645 48 EPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKK-ARESYIESELIYAY 121 (143)
Q Consensus 48 ~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~-~ke~~idt~Li~ay 121 (143)
+++.|..+|...+..+...+|++.|-++ ++|..+..+-....+.|+|++=+.++..+-+. -..|.+=..+..+|
T Consensus 17 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 96 (142)
T 2xcb_A 17 TLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAECH 96 (142)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHH
Confidence 4567778888888889999999999764 56667777777778899999999999988765 45666667888899
Q ss_pred HhcCChhhHHHHh
Q psy1645 122 ARTNRLADLEEFI 134 (143)
Q Consensus 122 Ak~~~l~ele~fl 134 (143)
.+.|+..+=.+++
T Consensus 97 ~~~g~~~~A~~~~ 109 (142)
T 2xcb_A 97 LQLGDLDGAESGF 109 (142)
T ss_dssp HHTTCHHHHHHHH
T ss_pred HHcCCHHHHHHHH
Confidence 9999987655443
No 82
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=93.83 E-value=0.6 Score=28.16 Aligned_cols=60 Identities=20% Similarity=0.395 Sum_probs=48.7
Q ss_pred chhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhh
Q psy1645 48 EPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKK 107 (143)
Q Consensus 48 ~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~ 107 (143)
.+..|..+|......+...+|++.|-++ +++..+..+-....+.|+|++=++++..+.+.
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 72 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALEL 72 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 4567888898888888889999988765 56666777777778899999999999887765
No 83
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=93.77 E-value=0.58 Score=37.19 Aligned_cols=124 Identities=15% Similarity=0.111 Sum_probs=89.1
Q ss_pred hHHHHHHHHHHHhhCCCHHHHHHH-HHHHhccchh----HHH--HHhcchhHHHHHHHHhhhhhhhHHHHHHHHhC----
Q psy1645 7 PATHNALAKIYIDSNNNPERFLKF-FLVDHLSKTP----FYV--LRCNEPGVWSQLAKAQLQKGLVKESIDSFIKA---- 75 (143)
Q Consensus 7 ~~~~nalakIyi~~~~~~E~fl~~-~Li~~~~~na----rYa--~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA---- 75 (143)
...+..+|.+|...+++.++.-.. ..++..+... +.+ .......+|..+|...+..+...+|++.|-++
T Consensus 147 a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~ 226 (336)
T 1p5q_A 147 STIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELD 226 (336)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 457888999999999998887333 2333333210 011 11112578889999999999999999999765
Q ss_pred -CCcchHHHHHHHHHcCCChHHHHHHHHHHHhhh-hhhhHHHHHHHHHHhcCChhhH
Q psy1645 76 -DDPSAYMDVVETSHATESWEDLVRYLQMARKKA-RESYIESELIYAYARTNRLADL 130 (143)
Q Consensus 76 -~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~-ke~~idt~Li~ayAk~~~l~el 130 (143)
+++..|..+-....+.|+|++=+.+++.|-+.. ..+.+=..|..+|.+.++..+-
T Consensus 227 p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a 283 (336)
T 1p5q_A 227 SNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAR 283 (336)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 677778888788888999999999999887653 3455666777788887776654
No 84
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=93.77 E-value=0.35 Score=42.53 Aligned_cols=119 Identities=10% Similarity=0.000 Sum_probs=88.6
Q ss_pred chHHHHHHHHHHHhhCCCHHHHHHH-HHHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcc
Q psy1645 6 EPATHNALAKIYIDSNNNPERFLKF-FLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPS 79 (143)
Q Consensus 6 ~~~~~nalakIyi~~~~~~E~fl~~-~Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps 79 (143)
.+..+..+|.+|.+.+++.++--.. ..++ ..-+++..|..+|...+..+...+|++.|-+| +++.
T Consensus 432 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~---------~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~ 502 (681)
T 2pzi_A 432 SVELPLMEVRALLDLGDVAKATRKLDDLAE---------RVGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELA 502 (681)
T ss_dssp CSHHHHHHHHHHHHHTCHHHHHHHHHHHHH---------HHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSH
T ss_pred chhHHHHHHHHHHhcCCHHHHHHHHHHHhc---------cCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChH
Confidence 4567888888888888887776211 1222 23456789999999999999999999999775 6778
Q ss_pred hHHHHHHHHHcCCChHHHHHHHHHHHhh-hhhhhHHHHHHHHHHhcCChhhHHHHh
Q psy1645 80 AYMDVVETSHATESWEDLVRYLQMARKK-ARESYIESELIYAYARTNRLADLEEFI 134 (143)
Q Consensus 80 ~y~eVie~a~~~~~~e~Lv~yL~MaRk~-~ke~~idt~Li~ayAk~~~l~ele~fl 134 (143)
.+..+-....+.|+|++ +.+++.|-+. -..+..=..|..+|.+.|+..+=.+.+
T Consensus 503 ~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~ 557 (681)
T 2pzi_A 503 PKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLARARSAEGDRVGAVRTL 557 (681)
T ss_dssp HHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 88888888889999999 9998877654 233444456777889999987755544
No 85
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=93.74 E-value=0.92 Score=31.29 Aligned_cols=85 Identities=13% Similarity=0.072 Sum_probs=46.9
Q ss_pred chhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHH-HHcCCCh--HHHHHHHHHHHhhh-hhhhHHHHHH
Q psy1645 48 EPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVET-SHATESW--EDLVRYLQMARKKA-RESYIESELI 118 (143)
Q Consensus 48 ~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~-a~~~~~~--e~Lv~yL~MaRk~~-ke~~idt~Li 118 (143)
.+..|..+|......+...+|++.|-++ ++|..+..+-.. ....|.| ++-+.++..+-+.. ..+.+=..|.
T Consensus 43 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la 122 (177)
T 2e2e_A 43 NSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLA 122 (177)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 4566666666666666666666666543 444445554444 4456666 66666666555432 2334444555
Q ss_pred HHHHhcCChhhHHH
Q psy1645 119 YAYARTNRLADLEE 132 (143)
Q Consensus 119 ~ayAk~~~l~ele~ 132 (143)
.+|.+.|+..+-.+
T Consensus 123 ~~~~~~g~~~~A~~ 136 (177)
T 2e2e_A 123 SDAFMQANYAQAIE 136 (177)
T ss_dssp HHHHHTTCHHHHHH
T ss_pred HHHHHcccHHHHHH
Confidence 56666666554433
No 86
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=93.74 E-value=1 Score=34.81 Aligned_cols=86 Identities=16% Similarity=0.109 Sum_probs=54.1
Q ss_pred hhHHHHHHHHhhhhhh-----------------hHHHHHHHHhC-------CCc----chHHHHHHHHHcCCChHHHHHH
Q psy1645 49 PGVWSQLAKAQLQKGL-----------------VKESIDSFIKA-------DDP----SAYMDVVETSHATESWEDLVRY 100 (143)
Q Consensus 49 ~~vWs~l~raqL~~~~-----------------V~eAI~sFIkA-------~dp----s~y~eVie~a~~~~~~e~Lv~y 100 (143)
..+|..+|......+. ..+|++.|-++ +++ ..+..+-......|+|++-+++
T Consensus 166 ~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 245 (411)
T 4a1s_A 166 GRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGDFQAAIEH 245 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChHHHHHH
Confidence 3466666666666666 66666666554 332 2445555566678889888888
Q ss_pred HHHHHhhhhhh-------hHHHHHHHHHHhcCChhhHHHHh
Q psy1645 101 LQMARKKARES-------YIESELIYAYARTNRLADLEEFI 134 (143)
Q Consensus 101 L~MaRk~~ke~-------~idt~Li~ayAk~~~l~ele~fl 134 (143)
++.+-+..++. .+=..+..+|.+.|+..+-.+++
T Consensus 246 ~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 286 (411)
T 4a1s_A 246 HQERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHY 286 (411)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHHHH
T ss_pred HHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHHHH
Confidence 88777654331 14456777788888876655543
No 87
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=93.67 E-value=1.4 Score=31.95 Aligned_cols=84 Identities=19% Similarity=0.186 Sum_probs=51.5
Q ss_pred HHHHHHHHhhhhhh--------------------hHHHHHHHHhC-------CCcc----hHHHHHHHHHcCCChHHHHH
Q psy1645 51 VWSQLAKAQLQKGL--------------------VKESIDSFIKA-------DDPS----AYMDVVETSHATESWEDLVR 99 (143)
Q Consensus 51 vWs~l~raqL~~~~--------------------V~eAI~sFIkA-------~dps----~y~eVie~a~~~~~~e~Lv~ 99 (143)
+|..+|......+. ..+|++.|-++ +++. .+..+-......|+|++-+.
T Consensus 125 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~ 204 (338)
T 3ro2_A 125 ALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAAVDLYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVI 204 (338)
T ss_dssp HHHHHHHHHHHHHHTSSSSSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHcCcccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 56666666666566 66666665443 3322 34445555566889998888
Q ss_pred HHHHHHhhhhh-------hhHHHHHHHHHHhcCChhhHHHHh
Q psy1645 100 YLQMARKKARE-------SYIESELIYAYARTNRLADLEEFI 134 (143)
Q Consensus 100 yL~MaRk~~ke-------~~idt~Li~ayAk~~~l~ele~fl 134 (143)
++..+.+..+. +.+=..+..+|.+.|+..+-.+++
T Consensus 205 ~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~ 246 (338)
T 3ro2_A 205 AHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYY 246 (338)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 88877755332 124455666777888877655544
No 88
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=93.66 E-value=0.82 Score=29.07 Aligned_cols=88 Identities=8% Similarity=-0.000 Sum_probs=67.0
Q ss_pred cchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhhh-hhhhHHHHHHHH
Q psy1645 47 NEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKKA-RESYIESELIYA 120 (143)
Q Consensus 47 ~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~-ke~~idt~Li~a 120 (143)
..+.-|..+|......+...+|++.|-++ +++..+..+-....+.|+|++-++++..+.+.. ..+.+=..+..+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~ 93 (133)
T 2lni_A 14 DLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAA 93 (133)
T ss_dssp CHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHH
Confidence 34566777888888888889999888764 345556666667778999999999999888753 456677778889
Q ss_pred HHhcCChhhHHHHh
Q psy1645 121 YARTNRLADLEEFI 134 (143)
Q Consensus 121 yAk~~~l~ele~fl 134 (143)
|.+.|+..+-.+++
T Consensus 94 ~~~~~~~~~A~~~~ 107 (133)
T 2lni_A 94 LEAMKDYTKAMDVY 107 (133)
T ss_dssp HHHTTCHHHHHHHH
T ss_pred HHHHhhHHHHHHHH
Confidence 99999987765554
No 89
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=93.61 E-value=0.93 Score=29.55 Aligned_cols=84 Identities=12% Similarity=0.024 Sum_probs=49.2
Q ss_pred hhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhhh-hhhhHHHHHHHHHH
Q psy1645 49 PGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKKA-RESYIESELIYAYA 122 (143)
Q Consensus 49 ~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~-ke~~idt~Li~ayA 122 (143)
.+.|...|......+...+|++.|-++ +++..+..+-....+.|+|++-+.++..+-+.- ..+..=..+..+|.
T Consensus 4 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 83 (126)
T 3upv_A 4 AEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQI 83 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 455666666666666666666666443 455556666666666777777777666665432 23334445556666
Q ss_pred hcCChhhHHH
Q psy1645 123 RTNRLADLEE 132 (143)
Q Consensus 123 k~~~l~ele~ 132 (143)
+.|+..+-.+
T Consensus 84 ~~~~~~~A~~ 93 (126)
T 3upv_A 84 AVKEYASALE 93 (126)
T ss_dssp HTTCHHHHHH
T ss_pred HHhCHHHHHH
Confidence 6666554333
No 90
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=93.59 E-value=0.78 Score=28.63 Aligned_cols=85 Identities=20% Similarity=0.309 Sum_probs=63.0
Q ss_pred hHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhhh-hhhhHHHHHHHHHHh
Q psy1645 50 GVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKKA-RESYIESELIYAYAR 123 (143)
Q Consensus 50 ~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~-ke~~idt~Li~ayAk 123 (143)
+.|..+|......+...+|++.|-++ +++..+..+.....+.|.|++-++++..+.+.. ..+.+-..+..+|.+
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK 81 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHH
Confidence 45777787777777888888777553 556667777777778999999999998877653 345566778888999
Q ss_pred cCChhhHHHHh
Q psy1645 124 TNRLADLEEFI 134 (143)
Q Consensus 124 ~~~l~ele~fl 134 (143)
.|+..+-.+++
T Consensus 82 ~~~~~~A~~~~ 92 (136)
T 2fo7_A 82 QGDYDEAIEYY 92 (136)
T ss_dssp TTCHHHHHHHH
T ss_pred hcCHHHHHHHH
Confidence 99987754443
No 91
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=93.55 E-value=1.2 Score=30.79 Aligned_cols=92 Identities=9% Similarity=0.098 Sum_probs=65.2
Q ss_pred hHHHHHHHHHHHhhCCCHHHHHHH-HHHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcch
Q psy1645 7 PATHNALAKIYIDSNNNPERFLKF-FLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSA 80 (143)
Q Consensus 7 ~~~~nalakIyi~~~~~~E~fl~~-~Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~ 80 (143)
+..+..+|++|.+.+++.++--.+ ..|+. .-++++.|..+|......+...+|+.+|-++ ++|..
T Consensus 31 ~~~~~~la~~y~~~~~~~~A~~~~~~al~~---------~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 101 (150)
T 4ga2_A 31 SIKGFYFAKLYYEAKEYDLAKKYICTYINV---------QERDPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDL 101 (150)
T ss_dssp HTTHHHHHHHHHHTTCHHHHHHHHHHHHHH---------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---------CCCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHH
Confidence 345667899999999988876211 12222 2246889999999988888999999998664 56667
Q ss_pred HHHHHHHHHcCCChHH-HHHHHHHHHhh
Q psy1645 81 YMDVVETSHATESWED-LVRYLQMARKK 107 (143)
Q Consensus 81 y~eVie~a~~~~~~e~-Lv~yL~MaRk~ 107 (143)
+..+-....+.|++++ ...|+..|-+.
T Consensus 102 ~~~la~~~~~~~~~~~aa~~~~~~al~l 129 (150)
T 4ga2_A 102 VLKIAELLCKNDVTDGRAKYWVERAAKL 129 (150)
T ss_dssp HHHHHHHHHHHCSSSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHHh
Confidence 7777777777888865 44567766553
No 92
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=93.46 E-value=1 Score=34.29 Aligned_cols=122 Identities=12% Similarity=0.139 Sum_probs=79.1
Q ss_pred hHHHHHHHHHHHhhCC--------------------CHHHHHHHHHHHhccchhHHHHHhcc----hhHHHHHHHHhhhh
Q psy1645 7 PATHNALAKIYIDSNN--------------------NPERFLKFFLVDHLSKTPFYVLRCNE----PGVWSQLAKAQLQK 62 (143)
Q Consensus 7 ~~~~nalakIyi~~~~--------------------~~E~fl~~~Li~~~~~narYa~k~~~----~~vWs~l~raqL~~ 62 (143)
...+..+|.+|...++ ..++. +...++.+.+.+..+ ..+|..+|......
T Consensus 127 ~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~------~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~ 200 (406)
T 3sf4_A 127 ARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAV------DFYEENLSLVTALGDRAAQGRAFGNLGNTHYLL 200 (406)
T ss_dssp HHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHH------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHH------HHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHc
Confidence 3478889999999888 34333 222223333333333 34666777777777
Q ss_pred hhhHHHHHHHHhC-------CCcc----hHHHHHHHHHcCCChHHHHHHHHHHHhhhhh-------hhHHHHHHHHHHhc
Q psy1645 63 GLVKESIDSFIKA-------DDPS----AYMDVVETSHATESWEDLVRYLQMARKKARE-------SYIESELIYAYART 124 (143)
Q Consensus 63 ~~V~eAI~sFIkA-------~dps----~y~eVie~a~~~~~~e~Lv~yL~MaRk~~ke-------~~idt~Li~ayAk~ 124 (143)
+...+|++.|-++ +++. .+..+-....+.|+|++-++++..+-+...+ +.+=..+..+|.+.
T Consensus 201 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~ 280 (406)
T 3sf4_A 201 GNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLL 280 (406)
T ss_dssp TBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHHHh
Confidence 7777776666554 3322 5566666677799999999999888765433 34555777888899
Q ss_pred CChhhHHHHh
Q psy1645 125 NRLADLEEFI 134 (143)
Q Consensus 125 ~~l~ele~fl 134 (143)
|+..+-.+++
T Consensus 281 g~~~~A~~~~ 290 (406)
T 3sf4_A 281 QDYEKAIDYH 290 (406)
T ss_dssp TCHHHHHHHH
T ss_pred CcHHHHHHHH
Confidence 9987765554
No 93
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=93.31 E-value=0.5 Score=30.57 Aligned_cols=62 Identities=13% Similarity=0.134 Sum_probs=52.6
Q ss_pred hcchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhh
Q psy1645 46 CNEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKK 107 (143)
Q Consensus 46 ~~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~ 107 (143)
-+++.+|..+|...+..+...+|++.|-++ +++..+..+-....+.|+|++-+.+++.+-+.
T Consensus 4 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l 70 (100)
T 3ma5_A 4 PEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEV 70 (100)
T ss_dssp -CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 357889999999999999999999999775 67778888888888899999999999877654
No 94
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=93.24 E-value=1 Score=34.17 Aligned_cols=85 Identities=11% Similarity=0.038 Sum_probs=61.2
Q ss_pred hhHHHHHHHHhhhhhhhHHHHHHHHhCC--------Cc----chHHHHHHHHHcCCChHHHHHHHHHHHhhhhh------
Q psy1645 49 PGVWSQLAKAQLQKGLVKESIDSFIKAD--------DP----SAYMDVVETSHATESWEDLVRYLQMARKKARE------ 110 (143)
Q Consensus 49 ~~vWs~l~raqL~~~~V~eAI~sFIkA~--------dp----s~y~eVie~a~~~~~~e~Lv~yL~MaRk~~ke------ 110 (143)
..+|..+|......+.-.+|++.|-+|- ++ ..|..+-....+.|+|++=+.|++.|-+..++
T Consensus 155 ~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~ 234 (293)
T 2qfc_A 155 LYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMAL 234 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHH
Confidence 3477778888887777888888887753 22 35566666777899999999999988766544
Q ss_pred -hhHHHHHHHHHHhcCChhhH-HHH
Q psy1645 111 -SYIESELIYAYARTNRLADL-EEF 133 (143)
Q Consensus 111 -~~idt~Li~ayAk~~~l~el-e~f 133 (143)
+.+=..+..+|.+.|+..+- +++
T Consensus 235 ~~~~~~~lg~~y~~~g~~~~Ai~~~ 259 (293)
T 2qfc_A 235 IGQLYYQRGECLRKLEYEEAEIEDA 259 (293)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHH
Confidence 44445667788899988664 553
No 95
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=93.22 E-value=1 Score=30.96 Aligned_cols=88 Identities=16% Similarity=0.084 Sum_probs=70.8
Q ss_pred cchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhhh-hhhhHHHHHHHH
Q psy1645 47 NEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKKA-RESYIESELIYA 120 (143)
Q Consensus 47 ~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~-ke~~idt~Li~a 120 (143)
.++..|..+|......+...+|++.|-++ +++..+..+-....+.|+|++=+.++..+-+.- ..+.+=..+..+
T Consensus 9 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 88 (164)
T 3sz7_A 9 PESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGLA 88 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 45678889999999989999999999764 677788888888889999999999999887653 346666778888
Q ss_pred HHhcCChhhHHHHh
Q psy1645 121 YARTNRLADLEEFI 134 (143)
Q Consensus 121 yAk~~~l~ele~fl 134 (143)
|.+.|+..+-.+++
T Consensus 89 ~~~~g~~~~A~~~~ 102 (164)
T 3sz7_A 89 RFDMADYKGAKEAY 102 (164)
T ss_dssp HHHTTCHHHHHHHH
T ss_pred HHHccCHHHHHHHH
Confidence 99999987755544
No 96
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=93.21 E-value=1 Score=31.06 Aligned_cols=123 Identities=11% Similarity=0.024 Sum_probs=74.6
Q ss_pred chHHHHHHHHHHHhhCCCHHHHHHHHHHHhccchhHHHHHhc----chhHHHHHHHHhhhhhhhHHHHHHHHh-------
Q psy1645 6 EPATHNALAKIYIDSNNNPERFLKFFLVDHLSKTPFYVLRCN----EPGVWSQLAKAQLQKGLVKESIDSFIK------- 74 (143)
Q Consensus 6 ~~~~~nalakIyi~~~~~~E~fl~~~Li~~~~~narYa~k~~----~~~vWs~l~raqL~~~~V~eAI~sFIk------- 74 (143)
....++.+|.+|...++..++. .. ..++.+.+.+.+ ...+|..+|......+...+|++.|-+
T Consensus 25 ~~~~~~~l~~~~~~~g~~~~A~--~~----~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 98 (203)
T 3gw4_A 25 ASGARFMLGYVYAFMDRFDEAR--AS----FQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLAS 98 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHH--HH----HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcHHHHH--HH----HHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 4567889999999999988876 21 122222222222 234566667666666666555555544
Q ss_pred CC-Ccc----hHHHHHHHHHcCCChHHHHHHHHHHHhhhhh---hh----HHHHHHHHHHhcCChhhHHHHh
Q psy1645 75 AD-DPS----AYMDVVETSHATESWEDLVRYLQMARKKARE---SY----IESELIYAYARTNRLADLEEFI 134 (143)
Q Consensus 75 A~-dps----~y~eVie~a~~~~~~e~Lv~yL~MaRk~~ke---~~----idt~Li~ayAk~~~l~ele~fl 134 (143)
.+ +|. .+..+-......|.|++=+++++.+.+..++ +. +=..|..+|.+.|+..+-.+++
T Consensus 99 ~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 170 (203)
T 3gw4_A 99 LPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHW 170 (203)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred cCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHH
Confidence 34 331 2444555556689999999988887754332 22 1245667788888877655544
No 97
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=93.21 E-value=0.51 Score=29.51 Aligned_cols=62 Identities=10% Similarity=0.204 Sum_probs=50.7
Q ss_pred chhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhhhh
Q psy1645 48 EPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKKAR 109 (143)
Q Consensus 48 ~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~k 109 (143)
+++.|..+|......+.-.+|++.|-++ ++|..+..+-....+.|+|++-+.+++.+-+...
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 69 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTS 69 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCS
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC
Confidence 5678889999999889999999999664 5677777777777889999999999998876543
No 98
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=93.16 E-value=2.2 Score=32.56 Aligned_cols=119 Identities=12% Similarity=0.032 Sum_probs=79.2
Q ss_pred HHHHHHHHHHhhCCCHHHHHHHHHHHhccchhHHHHHhcc----hhHHHHHHHHhhhhhhhHHHHHHHHhC-------CC
Q psy1645 9 THNALAKIYIDSNNNPERFLKFFLVDHLSKTPFYVLRCNE----PGVWSQLAKAQLQKGLVKESIDSFIKA-------DD 77 (143)
Q Consensus 9 ~~nalakIyi~~~~~~E~fl~~~Li~~~~~narYa~k~~~----~~vWs~l~raqL~~~~V~eAI~sFIkA-------~d 77 (143)
.|+.++.+|...+++.++.--+ .++.+...+.++ ...|..+|......|...+||..|-+| ++
T Consensus 39 ~~~~a~~~~~~~g~~~~A~~~~------~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~ 112 (292)
T 1qqe_A 39 LCVQAATIYRLRKELNLAGDSF------LKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQ 112 (292)
T ss_dssp HHHHHHHHHHHTTCTHHHHHHH------HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCCHHHHHHHH------HHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCC
Confidence 6888899999999999887222 222222233333 457778888877777777777666554 55
Q ss_pred cc----hHHHHHHHHHcC-CChHHHHHHHHHHHhhhhh-------hhHHHHHHHHHHhcCChhhHHHH
Q psy1645 78 PS----AYMDVVETSHAT-ESWEDLVRYLQMARKKARE-------SYIESELIYAYARTNRLADLEEF 133 (143)
Q Consensus 78 ps----~y~eVie~a~~~-~~~e~Lv~yL~MaRk~~ke-------~~idt~Li~ayAk~~~l~ele~f 133 (143)
+. .+..+-..-.+. |+|++=+.+++.|-+..++ +.+=..+..+|.++|+..+=.+.
T Consensus 113 ~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~ 180 (292)
T 1qqe_A 113 FRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDI 180 (292)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 43 455555556665 9999999999988765432 23344567788999998765444
No 99
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=93.12 E-value=0.83 Score=28.00 Aligned_cols=94 Identities=14% Similarity=0.088 Sum_probs=68.0
Q ss_pred cchHHHHHHHHHHHhhCCCHHHHHHH-HHHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhC-----C--
Q psy1645 5 TEPATHNALAKIYIDSNNNPERFLKF-FLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKA-----D-- 76 (143)
Q Consensus 5 ~~~~~~nalakIyi~~~~~~E~fl~~-~Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~-- 76 (143)
.++..+..+|.+|...++..++.-.. ..++.. -+.+..|..+|......+...+|++.|-++ +
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~---------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~ 74 (112)
T 2kck_A 4 QNPEEYYLEGVLQYDAGNYTESIDLFEKAIQLD---------PEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEY 74 (112)
T ss_dssp SSTTGGGGHHHHHHSSCCHHHHHHHHHHHHHHC---------CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTT
T ss_pred CcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhC---------cCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccc
Confidence 45667788999999999988876222 122221 235678889998888888888888888664 3
Q ss_pred CcchHHHHHHHHHcC-CChHHHHHHHHHHHhh
Q psy1645 77 DPSAYMDVVETSHAT-ESWEDLVRYLQMARKK 107 (143)
Q Consensus 77 dps~y~eVie~a~~~-~~~e~Lv~yL~MaRk~ 107 (143)
++..+..+-....+. |+|++-+.++..+-+.
T Consensus 75 ~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~ 106 (112)
T 2kck_A 75 NKDVWAAKADALRYIEGKEVEAEIAEARAKLE 106 (112)
T ss_dssp CHHHHHHHHHHHTTCSSCSHHHHHHHHHHGGG
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhc
Confidence 455666666777788 9999999998866543
No 100
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=93.07 E-value=1.7 Score=30.98 Aligned_cols=95 Identities=16% Similarity=0.084 Sum_probs=62.6
Q ss_pred hHHHHHHHHHHHhhCCCHHHHHHHHHHHhccchhHHHHH------hcchhHHHHHHHHhhhhhhhHHHHHHHHhCC----
Q psy1645 7 PATHNALAKIYIDSNNNPERFLKFFLVDHLSKTPFYVLR------CNEPGVWSQLAKAQLQKGLVKESIDSFIKAD---- 76 (143)
Q Consensus 7 ~~~~nalakIyi~~~~~~E~fl~~~Li~~~~~narYa~k------~~~~~vWs~l~raqL~~~~V~eAI~sFIkA~---- 76 (143)
...+..+|.+|...++..++. .++ .++.+...+ ......|..+|......+...+|++.|-++-
T Consensus 85 ~~~~~~l~~~~~~~g~~~~A~--~~~----~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 158 (283)
T 3edt_B 85 AATLNNLAVLYGKRGKYKEAE--PLC----KRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYA 158 (283)
T ss_dssp HHHHHHHHHHHHTTTCHHHHH--HHH----HHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHH--HHH----HHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 456888999999999988886 221 112222211 2335567778887777777777777775542
Q ss_pred ------Cc---chHHHHHHHHHcCCChHHHHHHHHHHHhh
Q psy1645 77 ------DP---SAYMDVVETSHATESWEDLVRYLQMARKK 107 (143)
Q Consensus 77 ------dp---s~y~eVie~a~~~~~~e~Lv~yL~MaRk~ 107 (143)
+| ..+..+-....+.|+|++=+.++..+.+.
T Consensus 159 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~ 198 (283)
T 3edt_B 159 TRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTR 198 (283)
T ss_dssp HHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 33 23445556666789999999998888765
No 101
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=92.98 E-value=1.3 Score=29.37 Aligned_cols=114 Identities=8% Similarity=0.051 Sum_probs=77.4
Q ss_pred hHHHHHHHHHHHhhCCCHHHHHHH-HHHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcch
Q psy1645 7 PATHNALAKIYIDSNNNPERFLKF-FLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSA 80 (143)
Q Consensus 7 ~~~~nalakIyi~~~~~~E~fl~~-~Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~ 80 (143)
...+..+|.+|...++..++.-.. ..++.. -+.+.+|..+|......+...+|++.|-++ +++..
T Consensus 13 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~---------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 83 (166)
T 1a17_A 13 AEELKTQANDYFKAKDYENAIKFYSQAIELN---------PSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKG 83 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS---------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC---------CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHH
Confidence 456788999999999988877222 122221 235788888988888888888888888653 56667
Q ss_pred HHHHHHHHHcCCChHHHHHHHHHHHhhh-hhhhHH--HHHHHHHHhcCChhh
Q psy1645 81 YMDVVETSHATESWEDLVRYLQMARKKA-RESYIE--SELIYAYARTNRLAD 129 (143)
Q Consensus 81 y~eVie~a~~~~~~e~Lv~yL~MaRk~~-ke~~id--t~Li~ayAk~~~l~e 129 (143)
+..+-....+.|+|++-+.++..+-+.. ..+.+- -.++..+.+.|+..+
T Consensus 84 ~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 135 (166)
T 1a17_A 84 YYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFER 135 (166)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777788999999999998877653 233332 233333555555443
No 102
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=92.97 E-value=1.7 Score=33.52 Aligned_cols=82 Identities=6% Similarity=-0.014 Sum_probs=50.0
Q ss_pred hHHHHHHHHhhhhhhhHHHHHHHHhC-------CCc----chHHHHHHHHHcCCChHHHHHHHHHHHhhhhhh-------
Q psy1645 50 GVWSQLAKAQLQKGLVKESIDSFIKA-------DDP----SAYMDVVETSHATESWEDLVRYLQMARKKARES------- 111 (143)
Q Consensus 50 ~vWs~l~raqL~~~~V~eAI~sFIkA-------~dp----s~y~eVie~a~~~~~~e~Lv~yL~MaRk~~ke~------- 111 (143)
..|..+|..... +...+|++.|-+| +++ ..+..+-....+.|+|++=+.+++.+-+..++.
T Consensus 117 ~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 195 (307)
T 2ifu_A 117 MALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCY 195 (307)
T ss_dssp HHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHH
Confidence 456667776666 6666666666544 332 344555566667889988888888776543321
Q ss_pred hHHHHHHHHHHhcCChhhHHH
Q psy1645 112 YIESELIYAYARTNRLADLEE 132 (143)
Q Consensus 112 ~idt~Li~ayAk~~~l~ele~ 132 (143)
..-..+..+|-+.|+..+-.+
T Consensus 196 ~~~~~~g~~~~~~g~~~~A~~ 216 (307)
T 2ifu_A 196 KKCIAQVLVQLHRADYVAAQK 216 (307)
T ss_dssp HHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHH
Confidence 133345566777787655433
No 103
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=92.83 E-value=1.6 Score=30.04 Aligned_cols=118 Identities=12% Similarity=0.104 Sum_probs=78.7
Q ss_pred cchHHHHHHHHHHHhhCCCHHHHHHH-HHHHhccchhHHHHHhcchhHHHHHHHH-hhhhhhh--HHHHHHHHhC-----
Q psy1645 5 TEPATHNALAKIYIDSNNNPERFLKF-FLVDHLSKTPFYVLRCNEPGVWSQLAKA-QLQKGLV--KESIDSFIKA----- 75 (143)
Q Consensus 5 ~~~~~~nalakIyi~~~~~~E~fl~~-~Li~~~~~narYa~k~~~~~vWs~l~ra-qL~~~~V--~eAI~sFIkA----- 75 (143)
.++..+..+|.+|...++..++.-.. ..++.. -+.+.+|..+|.. ....+.. .+|++.|-++
T Consensus 42 ~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~---------p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p 112 (177)
T 2e2e_A 42 QNSEQWALLGEYYLWQNDYSNSLLAYRQALQLR---------GENAELYAALATVLYYQASQHMTAQTRAMIDKALALDS 112 (177)
T ss_dssp SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH---------CSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCT
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC---------CCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCC
Confidence 45678889999999999888876222 122221 2457889899888 6566665 8888888654
Q ss_pred CCcchHHHHHHHHHcCCChHHHHHHHHHHHhhhhhhhHHHHHHHHHHhcCChhhHHHHh
Q psy1645 76 DDPSAYMDVVETSHATESWEDLVRYLQMARKKARESYIESELIYAYARTNRLADLEEFI 134 (143)
Q Consensus 76 ~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~ke~~idt~Li~ayAk~~~l~ele~fl 134 (143)
+++..+..+-....+.|+|++=+.++..+-+...+.. ......+..++..++...-
T Consensus 113 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~---~~~~~~~~i~~~~~~~~~~ 168 (177)
T 2e2e_A 113 NEITALMLLASDAFMQANYAQAIELWQKVMDLNSPRI---NRTQLVESINMAKLLQRRS 168 (177)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTS---CHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCc---cHHHHHHHHHHHHHhcCCC
Confidence 5666777777778889999999999998876644331 1222234444444544443
No 104
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=92.49 E-value=1.5 Score=31.08 Aligned_cols=81 Identities=12% Similarity=-0.010 Sum_probs=39.4
Q ss_pred hHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhhh-hhhhHHHHHHHHHHh
Q psy1645 50 GVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKKA-RESYIESELIYAYAR 123 (143)
Q Consensus 50 ~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~-ke~~idt~Li~ayAk 123 (143)
.+|..+|...+..+...+|++.|-++ +++..+..+-......|.|++=+.+++.+-+.. ..+.+-..|..++.+
T Consensus 89 ~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 168 (198)
T 2fbn_A 89 SCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNK 168 (198)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH
Confidence 45555555555555555555555433 334444444444445555655555555554432 233444444444544
Q ss_pred cCChhhH
Q psy1645 124 TNRLADL 130 (143)
Q Consensus 124 ~~~l~el 130 (143)
.++..+-
T Consensus 169 ~~~~~~~ 175 (198)
T 2fbn_A 169 LKEARKK 175 (198)
T ss_dssp HHHHHC-
T ss_pred HHHHHHH
Confidence 4444333
No 105
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=92.39 E-value=2.5 Score=31.24 Aligned_cols=88 Identities=15% Similarity=-0.062 Sum_probs=62.3
Q ss_pred cchhHHHHH------------HHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhhh-
Q psy1645 47 NEPGVWSQL------------AKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKKA- 108 (143)
Q Consensus 47 ~~~~vWs~l------------~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~- 108 (143)
+.+.+|..+ +......+...+|++.|-++ ++|..+..+-....+.|+|++-+.++..+-+..
T Consensus 106 ~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~ 185 (359)
T 3ieg_A 106 EEKEAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVWDAELRELRAECFIKEGEPRKAISDLKAASKLKS 185 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCS
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCC
Confidence 455666665 45555566778888887663 567777777788888999999999988777653
Q ss_pred hhhhHHHHHHHHHHhcCChhhHHHHh
Q psy1645 109 RESYIESELIYAYARTNRLADLEEFI 134 (143)
Q Consensus 109 ke~~idt~Li~ayAk~~~l~ele~fl 134 (143)
..+.+=..+..+|.+.|+..+-.+.+
T Consensus 186 ~~~~~~~~la~~~~~~~~~~~A~~~~ 211 (359)
T 3ieg_A 186 DNTEAFYKISTLYYQLGDHELSLSEV 211 (359)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 45556667777888888876654433
No 106
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=92.37 E-value=2 Score=30.40 Aligned_cols=20 Identities=10% Similarity=0.066 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHhhCCCHHHH
Q psy1645 8 ATHNALAKIYIDSNNNPERF 27 (143)
Q Consensus 8 ~~~nalakIyi~~~~~~E~f 27 (143)
..+..+|.+|...+++.++.
T Consensus 39 ~~~~~~g~~~~~~~~~~~A~ 58 (198)
T 2fbn_A 39 FDIKEEGNEFFKKNEINEAI 58 (198)
T ss_dssp HHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHH
Confidence 35667788888888877766
No 107
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=92.34 E-value=2.5 Score=32.98 Aligned_cols=121 Identities=12% Similarity=0.082 Sum_probs=60.1
Q ss_pred hHHHHHHHHHHHhhCCCHHHHHHHHHHHhccchhHHHHHhc-----chhHHHHHHHHhhhhhhhHHHHHHHHhC------
Q psy1645 7 PATHNALAKIYIDSNNNPERFLKFFLVDHLSKTPFYVLRCN-----EPGVWSQLAKAQLQKGLVKESIDSFIKA------ 75 (143)
Q Consensus 7 ~~~~nalakIyi~~~~~~E~fl~~~Li~~~~~narYa~k~~-----~~~vWs~l~raqL~~~~V~eAI~sFIkA------ 75 (143)
...|..+|.+|...+++.++. .+ ..++.+...+.. ....+..+|......+...+|++.|-+|
T Consensus 143 a~~~~~lg~~~~~~~~~~~A~--~~----~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~ 216 (383)
T 3ulq_A 143 AEFFFKMSESYYYMKQTYFSM--DY----ARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEA 216 (383)
T ss_dssp HHHHHHHHHHHHHTTCHHHHH--HH----HHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHH--HH----HHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 356778888888888877765 21 111111111111 1234445555555555555555555443
Q ss_pred -CCcc----hHHHHHHHHHcCCChHHHHHHHHHHHhhh-------hhhhHHHHHHHHHHhcCChhhHHHH
Q psy1645 76 -DDPS----AYMDVVETSHATESWEDLVRYLQMARKKA-------RESYIESELIYAYARTNRLADLEEF 133 (143)
Q Consensus 76 -~dps----~y~eVie~a~~~~~~e~Lv~yL~MaRk~~-------ke~~idt~Li~ayAk~~~l~ele~f 133 (143)
+++. .+..+-......|+|++=++|++.|-+.. ..+.+=..|..+|.+.|+..+-.++
T Consensus 217 ~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~ 286 (383)
T 3ulq_A 217 EKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEY 286 (383)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred cCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHHHHHHH
Confidence 2221 33333344445666666666666655421 1222334455556666665554443
No 108
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=92.33 E-value=1 Score=31.26 Aligned_cols=87 Identities=8% Similarity=-0.049 Sum_probs=69.0
Q ss_pred chhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhh-hhhhhHHHHHHHHH
Q psy1645 48 EPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKK-ARESYIESELIYAY 121 (143)
Q Consensus 48 ~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~-~ke~~idt~Li~ay 121 (143)
.+..|-.+|+.....+.-.+|++.|-++ ++|..+..+-..-.+.|+|++-+.+++.+-+. -..+.+=..|..+|
T Consensus 30 ~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~ 109 (150)
T 4ga2_A 30 KSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIAELL 109 (150)
T ss_dssp HHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 4566778898888888889999888764 77888888888888899999999999988765 34555666777888
Q ss_pred HhcCChhh-HHHHh
Q psy1645 122 ARTNRLAD-LEEFI 134 (143)
Q Consensus 122 Ak~~~l~e-le~fl 134 (143)
.+.|+..+ .+.|+
T Consensus 110 ~~~~~~~~aa~~~~ 123 (150)
T 4ga2_A 110 CKNDVTDGRAKYWV 123 (150)
T ss_dssp HHHCSSSSHHHHHH
T ss_pred HHcCChHHHHHHHH
Confidence 99999864 66665
No 109
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=92.30 E-value=1.9 Score=33.23 Aligned_cols=118 Identities=7% Similarity=0.004 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHhhCCCHHHHHHHHHHHhccchhHHHHHhcc----hhHHHHHHHHhhhhhhhHH-------HHHHHHhCC
Q psy1645 8 ATHNALAKIYIDSNNNPERFLKFFLVDHLSKTPFYVLRCNE----PGVWSQLAKAQLQKGLVKE-------SIDSFIKAD 76 (143)
Q Consensus 8 ~~~nalakIyi~~~~~~E~fl~~~Li~~~~~narYa~k~~~----~~vWs~l~raqL~~~~V~e-------AI~sFIkA~ 76 (143)
..|+.++++|...+++.++---+ .++.+...+..+ ...|..+|......+...+ |++-|-+.+
T Consensus 37 ~~~~~a~~~~~~~g~~~~A~~~~------~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g 110 (307)
T 2ifu_A 37 SEYAKAAVAFKNAKQLEQAKDAY------LQEAEAHANNRSLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENG 110 (307)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHH------HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHH------HHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcC
Confidence 36888899999998888876222 222333333333 2355666666555444444 444455566
Q ss_pred Ccch----HHHHHHHHHcCCChHHHHHHHHHHHhhhhh-------hhHHHHHHHHHHhcCChhhHHH
Q psy1645 77 DPSA----YMDVVETSHATESWEDLVRYLQMARKKARE-------SYIESELIYAYARTNRLADLEE 132 (143)
Q Consensus 77 dps~----y~eVie~a~~~~~~e~Lv~yL~MaRk~~ke-------~~idt~Li~ayAk~~~l~ele~ 132 (143)
+|.. +..+-..-.+ |+|++=+.+++.|-+..++ +.+=..+..+|.+.|+..+=.+
T Consensus 111 ~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~ 176 (307)
T 2ifu_A 111 TPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAA 176 (307)
T ss_dssp CHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 6653 3333344445 9999999999988765432 2334456778889999876433
No 110
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=91.96 E-value=1.8 Score=28.64 Aligned_cols=90 Identities=8% Similarity=-0.091 Sum_probs=69.8
Q ss_pred HhcchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhhh-hhhhHHHHHH
Q psy1645 45 RCNEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKKA-RESYIESELI 118 (143)
Q Consensus 45 k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~-ke~~idt~Li 118 (143)
..+.+..|..+|......+...+|++.|-++ +++..+..+-....+.|+|++-+.++..+-+.. ..+.+=..+.
T Consensus 9 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a 88 (166)
T 1a17_A 9 ALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRA 88 (166)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHH
Confidence 3456778888999888888889999888653 566677777777888999999999999887753 3455666777
Q ss_pred HHHHhcCChhhHHHHh
Q psy1645 119 YAYARTNRLADLEEFI 134 (143)
Q Consensus 119 ~ayAk~~~l~ele~fl 134 (143)
.+|.+.|+..+-.+++
T Consensus 89 ~~~~~~~~~~~A~~~~ 104 (166)
T 1a17_A 89 ASNMALGKFRAALRDY 104 (166)
T ss_dssp HHHHHTTCHHHHHHHH
T ss_pred HHHHHhccHHHHHHHH
Confidence 8888999987655443
No 111
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=91.84 E-value=1.9 Score=35.13 Aligned_cols=123 Identities=13% Similarity=0.148 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHhhCCCHHHHHHH-HHHHhccch-------hHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhC----
Q psy1645 8 ATHNALAKIYIDSNNNPERFLKF-FLVDHLSKT-------PFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKA---- 75 (143)
Q Consensus 8 ~~~nalakIyi~~~~~~E~fl~~-~Li~~~~~n-------arYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA---- 75 (143)
..+..+|.+|...+++.++.-.. ..++...+. ..-...-..+.+|..+|...+..+.-.+|++.|-+|
T Consensus 224 ~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~ 303 (370)
T 1ihg_A 224 EDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEID 303 (370)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhC
Confidence 34778899999999988887322 122211110 000123345688899999998888899999988654
Q ss_pred -CCcchHHHHHHHHHcCCChHHHHHHHHHHHhhh-hhhhHHHHHHHHHHhcCChhhH
Q psy1645 76 -DDPSAYMDVVETSHATESWEDLVRYLQMARKKA-RESYIESELIYAYARTNRLADL 130 (143)
Q Consensus 76 -~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~-ke~~idt~Li~ayAk~~~l~el 130 (143)
+++..+..+-....+.|+|++=+.+++.|-+.. ..+.+-..|..++.+.++..+-
T Consensus 304 p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~~~a 360 (370)
T 1ihg_A 304 PSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQKDK 360 (370)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 455666667677778999999999999988764 3555666677777766655443
No 112
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=91.66 E-value=1.7 Score=31.03 Aligned_cols=88 Identities=11% Similarity=-0.033 Sum_probs=71.3
Q ss_pred cchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhh-hhhhhHHHHHHHH
Q psy1645 47 NEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKK-ARESYIESELIYA 120 (143)
Q Consensus 47 ~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~-~ke~~idt~Li~a 120 (143)
++++.|..+|......+...+|++.|-++ ++|..+..+=....+.|+|++=+.++..|-+. -..|..=..|-.|
T Consensus 34 ~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~~ 113 (151)
T 3gyz_A 34 DMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQC 113 (151)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHHHHH
Confidence 45678888999999999999999999664 66777777778888899999999988877664 3556677788899
Q ss_pred HHhcCChhhHHHHh
Q psy1645 121 YARTNRLADLEEFI 134 (143)
Q Consensus 121 yAk~~~l~ele~fl 134 (143)
|.+.|+..+=.+++
T Consensus 114 ~~~lg~~~eA~~~~ 127 (151)
T 3gyz_A 114 QLRLKAPLKAKECF 127 (151)
T ss_dssp HHHTTCHHHHHHHH
T ss_pred HHHcCCHHHHHHHH
Confidence 99999987765544
No 113
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=91.56 E-value=1.5 Score=28.24 Aligned_cols=96 Identities=14% Similarity=0.095 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHhhCCCHHHHHHHHHHHhccchhHHHHHhcc----hhHHHHHHHHhhhhhhhHHHHHHHHh-------CC
Q psy1645 8 ATHNALAKIYIDSNNNPERFLKFFLVDHLSKTPFYVLRCNE----PGVWSQLAKAQLQKGLVKESIDSFIK-------AD 76 (143)
Q Consensus 8 ~~~nalakIyi~~~~~~E~fl~~~Li~~~~~narYa~k~~~----~~vWs~l~raqL~~~~V~eAI~sFIk-------A~ 76 (143)
..+..+|.+|...++..++. .+ ..++.+...+..+ ..+|..+|......+...+|++.|-+ .+
T Consensus 50 ~~~~~l~~~~~~~g~~~~A~--~~----~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~ 123 (164)
T 3ro3_A 50 IAYSNLGNAYIFLGEFETAS--EY----YKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELK 123 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHH--HH----HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCHHHHH--HH----HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcc
Confidence 36788999999999988887 22 1222333333333 34555567666666666566555543 34
Q ss_pred Ccc----hHHHHHHHHHcCCChHHHHHHHHHHHhhhh
Q psy1645 77 DPS----AYMDVVETSHATESWEDLVRYLQMARKKAR 109 (143)
Q Consensus 77 dps----~y~eVie~a~~~~~~e~Lv~yL~MaRk~~k 109 (143)
++. .+..+-......|++++-++++..+.+..+
T Consensus 124 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 160 (164)
T 3ro3_A 124 DRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISR 160 (164)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred chHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 432 344444455567888888888877766543
No 114
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=91.44 E-value=2.3 Score=28.75 Aligned_cols=91 Identities=12% Similarity=0.111 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHhhCCCHHHHHHH-HHHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchH
Q psy1645 8 ATHNALAKIYIDSNNNPERFLKF-FLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAY 81 (143)
Q Consensus 8 ~~~nalakIyi~~~~~~E~fl~~-~Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y 81 (143)
..|...|+.|...+++.++.-.+ ..|+.- -+++.+|..+|.....-+...+||+.|-++ +++..|
T Consensus 14 ~~~~~~G~~~~~~g~~~~A~~~~~~al~~~---------p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~ 84 (126)
T 4gco_A 14 QEEKNKGNEYFKKGDYPTAMRHYNEAVKRD---------PENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGY 84 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---------CCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHH
Confidence 45778899999999998887322 133322 246789999999999888999999998764 666777
Q ss_pred HHHHHHHHcCCChHHHHHHHHHHHhh
Q psy1645 82 MDVVETSHATESWEDLVRYLQMARKK 107 (143)
Q Consensus 82 ~eVie~a~~~~~~e~Lv~yL~MaRk~ 107 (143)
..+-..-...|+|++=+.+++.+-+.
T Consensus 85 ~~lg~~~~~~~~~~~A~~~~~~al~l 110 (126)
T 4gco_A 85 IRKAACLVAMREWSKAQRAYEDALQV 110 (126)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 77777778899999999988877654
No 115
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=91.39 E-value=1.5 Score=31.62 Aligned_cols=87 Identities=10% Similarity=-0.013 Sum_probs=66.6
Q ss_pred chhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhhhhhhhH----HHHHH
Q psy1645 48 EPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKKARESYI----ESELI 118 (143)
Q Consensus 48 ~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~ke~~i----dt~Li 118 (143)
+++++-..|......+...+|++.|-++ +++..+..+-....+.|+|++-+.++..+-+....+.+ =..+.
T Consensus 2 n~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~lg 81 (272)
T 3u4t_A 2 NDDVEFRYADFLFKNNNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYYELAKYDLAQKDIETYFSKVNATKAKSADFEYYG 81 (272)
T ss_dssp ---CHHHHHHHHHTTTCHHHHHHHHHHHHHTTCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHTTSCTTTCCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccCchhHHHHHHHHHH
Confidence 3566777788888888888898888764 66778888888888999999999999988875444444 35778
Q ss_pred HHHHhcCChhhHHHHh
Q psy1645 119 YAYARTNRLADLEEFI 134 (143)
Q Consensus 119 ~ayAk~~~l~ele~fl 134 (143)
.+|.+.|+..+-.+++
T Consensus 82 ~~~~~~~~~~~A~~~~ 97 (272)
T 3u4t_A 82 KILMKKGQDSLAIQQY 97 (272)
T ss_dssp HHHHHTTCHHHHHHHH
T ss_pred HHHHHcccHHHHHHHH
Confidence 8899999987766554
No 116
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=91.26 E-value=0.88 Score=37.88 Aligned_cols=114 Identities=11% Similarity=0.137 Sum_probs=78.5
Q ss_pred hHHHHHHHHHHHhh---------CCCHHHHHHH-HHHHhccchhHHHHHhcchhHHHHHHHHhhhh--------hhhHHH
Q psy1645 7 PATHNALAKIYIDS---------NNNPERFLKF-FLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQK--------GLVKES 68 (143)
Q Consensus 7 ~~~~nalakIyi~~---------~~~~E~fl~~-~Li~~~~~narYa~k~~~~~vWs~l~raqL~~--------~~V~eA 68 (143)
+..+..+|.+|... ++..++.-.. ..++ ..-+++..|..+|...+.. +...+|
T Consensus 170 ~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~---------~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A 240 (474)
T 4abn_A 170 KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQ---------MDVLDGRSWYILGNAYLSLYFNTGQNPKISQQA 240 (474)
T ss_dssp HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHH---------HCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHH---------hCCCCHHHHHHHHHHHHHHHHhhccccchHHHH
Confidence 46777888888877 5555544111 1111 1235678999999988887 889999
Q ss_pred HHHHHhC--------CCcchHHHHHHHHHcCCChHHHHHHHHHHHhhh-hhhhHHHHHHHHHHhcCChhh
Q psy1645 69 IDSFIKA--------DDPSAYMDVVETSHATESWEDLVRYLQMARKKA-RESYIESELIYAYARTNRLAD 129 (143)
Q Consensus 69 I~sFIkA--------~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~-ke~~idt~Li~ayAk~~~l~e 129 (143)
++.|-+| ++|..+..+-....+.|+|++=+.++..|.+.- ..+..-..+..+|.++|+..+
T Consensus 241 ~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~~~l~~~~~~lg~~~e 310 (474)
T 4abn_A 241 LSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQQREQQLLEFLSRLTS 310 (474)
T ss_dssp HHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9998765 566778888888888999999999998887642 334444555566666665544
No 117
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=91.20 E-value=2.7 Score=29.25 Aligned_cols=58 Identities=7% Similarity=0.014 Sum_probs=41.4
Q ss_pred CCCcchHHHHHHHHHcCCChHHHHHHHHHHHhhhh---hhhHHHHHHHHHHhcCChhhHHH
Q psy1645 75 ADDPSAYMDVVETSHATESWEDLVRYLQMARKKAR---ESYIESELIYAYARTNRLADLEE 132 (143)
Q Consensus 75 A~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~k---e~~idt~Li~ayAk~~~l~ele~ 132 (143)
-++|..+..+-....+.|.|++=+.+++.+-+.-. ++..-..|..+|.+.|+.++-..
T Consensus 105 P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~ 165 (176)
T 2r5s_A 105 PDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIAS 165 (176)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHH
T ss_pred CCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHH
Confidence 35677777777777888999988888887665532 24456677788888888876443
No 118
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=91.15 E-value=2.7 Score=32.77 Aligned_cols=117 Identities=10% Similarity=0.037 Sum_probs=72.3
Q ss_pred HHHHHHHhhCCCHHHHHHHHHHHhccchhHHHHHh----cchhHHHHHHHHhhhhhhhHHHHHHHHhC-------CC-c-
Q psy1645 12 ALAKIYIDSNNNPERFLKFFLVDHLSKTPFYVLRC----NEPGVWSQLAKAQLQKGLVKESIDSFIKA-------DD-P- 78 (143)
Q Consensus 12 alakIyi~~~~~~E~fl~~~Li~~~~~narYa~k~----~~~~vWs~l~raqL~~~~V~eAI~sFIkA-------~d-p- 78 (143)
-.|.+|...+++.++. ..+ .++.+.+.+. .....|..+|......+....|++.|-+| ++ +
T Consensus 108 ~~g~~~~~~g~~~~A~--~~~----~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~ 181 (383)
T 3ulq_A 108 FRGMYELDQREYLSAI--KFF----KKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNI 181 (383)
T ss_dssp HHHHHHHHTTCHHHHH--HHH----HHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHH
T ss_pred HHHHHHHHhcCHHHHH--HHH----HHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchH
Confidence 3667777777776665 211 1111222222 23467778888777777666666666554 32 1
Q ss_pred ---chHHHHHHHHHcCCChHHHHHHHHHHHhhhhhhh-------HHHHHHHHHHhcCChhhHHHHh
Q psy1645 79 ---SAYMDVVETSHATESWEDLVRYLQMARKKARESY-------IESELIYAYARTNRLADLEEFI 134 (143)
Q Consensus 79 ---s~y~eVie~a~~~~~~e~Lv~yL~MaRk~~ke~~-------idt~Li~ayAk~~~l~ele~fl 134 (143)
..+..+-......|+|++=++++..|-+..++.. +=..|..+|.+.|+..+-.+++
T Consensus 182 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~ 247 (383)
T 3ulq_A 182 RLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYF 247 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 2344445566678999999999988876544332 5556788889999987655543
No 119
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=90.43 E-value=4.6 Score=31.50 Aligned_cols=122 Identities=10% Similarity=0.058 Sum_probs=70.9
Q ss_pred hHHHHHHHHHHHhhCCCHHHHHHHHHHHhccchhHHHHHh-----cchhHHHHHHHHhhhhhhhHHHHHHHHhC------
Q psy1645 7 PATHNALAKIYIDSNNNPERFLKFFLVDHLSKTPFYVLRC-----NEPGVWSQLAKAQLQKGLVKESIDSFIKA------ 75 (143)
Q Consensus 7 ~~~~nalakIyi~~~~~~E~fl~~~Li~~~~~narYa~k~-----~~~~vWs~l~raqL~~~~V~eAI~sFIkA------ 75 (143)
...+..+|.+|...+++.++. .+ ..++.+...+. .....|..+|......+.-.+|++.|-+|
T Consensus 141 a~~~~~lg~~y~~~~~~~~A~--~~----~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~ 214 (378)
T 3q15_A 141 AEFHFKVAEAYYHMKQTHVSM--YH----ILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMD 214 (378)
T ss_dssp HHHHHHHHHHHHHTTCHHHHH--HH----HHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcHHHH--HH----HHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 346777888888888877765 21 12222222222 23445666777777766666666666554
Q ss_pred -CCcc----hHHHHHHHHHcCCChHHHHHHHHHHHhhh---h---hhhHHHHHHHHHHhcCChhhHHHHh
Q psy1645 76 -DDPS----AYMDVVETSHATESWEDLVRYLQMARKKA---R---ESYIESELIYAYARTNRLADLEEFI 134 (143)
Q Consensus 76 -~dps----~y~eVie~a~~~~~~e~Lv~yL~MaRk~~---k---e~~idt~Li~ayAk~~~l~ele~fl 134 (143)
+++. .+..+-....+.|+|++=++|++.|-+.. . .+..=..|..+|.+.|+..+-.+++
T Consensus 215 ~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 284 (378)
T 3q15_A 215 IQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFI 284 (378)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 3333 22333344455788888888888776522 1 2334445666777888876655544
No 120
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=90.39 E-value=1.6 Score=29.26 Aligned_cols=87 Identities=13% Similarity=0.059 Sum_probs=52.6
Q ss_pred HHHHHHHHHhhCCCHHHHHHH-HHHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHH
Q psy1645 10 HNALAKIYIDSNNNPERFLKF-FLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMD 83 (143)
Q Consensus 10 ~nalakIyi~~~~~~E~fl~~-~Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~e 83 (143)
+..+|.+++..++..++.-.. ..++. .-+.++.|..+|......+...+|+.+|-++ +++..+..
T Consensus 20 ~~~~g~~~~~~g~~~~A~~~~~~al~~---------~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~ 90 (121)
T 1hxi_A 20 PMEEGLSMLKLANLAEAALAFEAVCQK---------EPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAA 90 (121)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH---------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHH---------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 455677777777766665211 11111 1235677888888777777778888777653 44555555
Q ss_pred HHHHHHcCCChHHHHHHHHHHH
Q psy1645 84 VVETSHATESWEDLVRYLQMAR 105 (143)
Q Consensus 84 Vie~a~~~~~~e~Lv~yL~MaR 105 (143)
+-....+.|.+++-+.++..+-
T Consensus 91 la~~~~~~g~~~~A~~~~~~al 112 (121)
T 1hxi_A 91 LAVSHTNEHNANAALASLRAWL 112 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHH
Confidence 5555556666666666665443
No 121
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=90.27 E-value=3 Score=34.60 Aligned_cols=124 Identities=8% Similarity=0.059 Sum_probs=83.7
Q ss_pred hHHHHHHHHHHHhhCCCHHHHHHH-HHHHhccch----hHHH--HHhcchhHHHHHHHHhhhhhhhHHHHHHHHh-----
Q psy1645 7 PATHNALAKIYIDSNNNPERFLKF-FLVDHLSKT----PFYV--LRCNEPGVWSQLAKAQLQKGLVKESIDSFIK----- 74 (143)
Q Consensus 7 ~~~~nalakIyi~~~~~~E~fl~~-~Li~~~~~n----arYa--~k~~~~~vWs~l~raqL~~~~V~eAI~sFIk----- 74 (143)
...+..+|.+|...+++.++.-.. ..++..... -+.. .......+|..+|...+..+.-.+|++.|-+
T Consensus 268 a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~ 347 (457)
T 1kt0_A 268 AAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLD 347 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Confidence 346788999999999998887333 133322221 0111 1111257888889999888899999999977
Q ss_pred CCCcchHHHHHHHHHcCCChHHHHHHHHHHHhhh-hhhhHHHHHHHHHHhcCChhhH
Q psy1645 75 ADDPSAYMDVVETSHATESWEDLVRYLQMARKKA-RESYIESELIYAYARTNRLADL 130 (143)
Q Consensus 75 A~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~-ke~~idt~Li~ayAk~~~l~el 130 (143)
.+++..|...-....+.|+|++=+.+++.|-+.- ..+.+=..|..+|.+.++..+-
T Consensus 348 p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a 404 (457)
T 1kt0_A 348 SANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNER 404 (457)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4677777777777888999999999999887652 3445556666777776665443
No 122
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.58 E-value=2.9 Score=27.00 Aligned_cols=87 Identities=10% Similarity=-0.010 Sum_probs=47.8
Q ss_pred cchhHHHHHHHHhhhhhhhHHHHHHHHhC--CCc------chHHHHHHHHHcCCChHHHHHHHHHHHhhh-hhhhHHHHH
Q psy1645 47 NEPGVWSQLAKAQLQKGLVKESIDSFIKA--DDP------SAYMDVVETSHATESWEDLVRYLQMARKKA-RESYIESEL 117 (143)
Q Consensus 47 ~~~~vWs~l~raqL~~~~V~eAI~sFIkA--~dp------s~y~eVie~a~~~~~~e~Lv~yL~MaRk~~-ke~~idt~L 117 (143)
.....|..+|......+...+|++.|-++ .+| ..+..+-....+.|+|++-+.++..+-+.. ..+.+=..+
T Consensus 26 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 105 (148)
T 2dba_A 26 SSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRR 105 (148)
T ss_dssp CCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHH
Confidence 34555666666666666666666666543 222 223444444455667777666666665442 234444455
Q ss_pred HHHHHhcCChhhHHHH
Q psy1645 118 IYAYARTNRLADLEEF 133 (143)
Q Consensus 118 i~ayAk~~~l~ele~f 133 (143)
..+|.+.|+..+-..+
T Consensus 106 a~~~~~~~~~~~A~~~ 121 (148)
T 2dba_A 106 SQALEKLGRLDQAVLD 121 (148)
T ss_dssp HHHHHHHTCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHH
Confidence 5666666665554433
No 123
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=89.27 E-value=4.2 Score=28.37 Aligned_cols=94 Identities=13% Similarity=0.053 Sum_probs=70.9
Q ss_pred chHHHHHHHHHHHhhCCCHHHHHHH-HHHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhCC-----C--
Q psy1645 6 EPATHNALAKIYIDSNNNPERFLKF-FLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKAD-----D-- 77 (143)
Q Consensus 6 ~~~~~nalakIyi~~~~~~E~fl~~-~Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA~-----d-- 77 (143)
.+..+..+|.+|...++..++.-.. ..++.- -+.+..|..+|......+...+|++.|-++- +
T Consensus 36 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~---------~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~ 106 (213)
T 1hh8_A 36 HSRICFNIGCMYTILKNMTEAEKAFTRSINRD---------KHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQL 106 (213)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSE
T ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---------ccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccH
Confidence 5678899999999999988876222 122211 2457789999999999899999999986652 1
Q ss_pred --------------cchHHHHHHHHHcCCChHHHHHHHHHHHhhh
Q psy1645 78 --------------PSAYMDVVETSHATESWEDLVRYLQMARKKA 108 (143)
Q Consensus 78 --------------ps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~ 108 (143)
+..+..+-....+.|+|++=+.++..+-+..
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 151 (213)
T 1hh8_A 107 IDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMK 151 (213)
T ss_dssp EECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcC
Confidence 1566777777788999999999999888654
No 124
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=88.74 E-value=3.4 Score=26.66 Aligned_cols=98 Identities=8% Similarity=-0.021 Sum_probs=72.0
Q ss_pred cchHHHHHHHHHHHhhCCCHHHHHHH-HHHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHh-----CCCc
Q psy1645 5 TEPATHNALAKIYIDSNNNPERFLKF-FLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIK-----ADDP 78 (143)
Q Consensus 5 ~~~~~~nalakIyi~~~~~~E~fl~~-~Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIk-----A~dp 78 (143)
.....+..+|.+|...+++.++.-.. ..++..+.+ ...+.+|..++......+...+|++.|-+ .+++
T Consensus 26 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~ 99 (148)
T 2dba_A 26 SSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATP------QDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDV 99 (148)
T ss_dssp CCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCH------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccc------hHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCH
Confidence 45678889999999999998887222 123222211 01268899999988888888888888855 3566
Q ss_pred chHHHHHHHHHcCCChHHHHHHHHHHHhhh
Q psy1645 79 SAYMDVVETSHATESWEDLVRYLQMARKKA 108 (143)
Q Consensus 79 s~y~eVie~a~~~~~~e~Lv~yL~MaRk~~ 108 (143)
..+..+-....+.|+|++-+.+++.+.+..
T Consensus 100 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~ 129 (148)
T 2dba_A 100 KALYRRSQALEKLGRLDQAVLDLQRCVSLE 129 (148)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 677777777888999999999999887653
No 125
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=88.69 E-value=3.8 Score=34.18 Aligned_cols=88 Identities=17% Similarity=0.111 Sum_probs=71.1
Q ss_pred cchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhhh-hhhhHHHHHHHH
Q psy1645 47 NEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKKA-RESYIESELIYA 120 (143)
Q Consensus 47 ~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~-ke~~idt~Li~a 120 (143)
+++..|..+|......+...+|++.|-++ +++..+..+-....+.|+|++=+.+++.+-+.. ..+..=..|..+
T Consensus 21 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~ 100 (568)
T 2vsy_A 21 QDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHA 100 (568)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 56788999999999989999999999765 556677777778888999999999999887653 345566778889
Q ss_pred HHhcCChhhHHHHh
Q psy1645 121 YARTNRLADLEEFI 134 (143)
Q Consensus 121 yAk~~~l~ele~fl 134 (143)
|.+.|+..+-.+++
T Consensus 101 ~~~~g~~~~A~~~~ 114 (568)
T 2vsy_A 101 LEDAGQAEAAAAAY 114 (568)
T ss_dssp HHHTTCHHHHHHHH
T ss_pred HHHcCCHHHHHHHH
Confidence 99999987766554
No 126
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=88.56 E-value=4.1 Score=27.40 Aligned_cols=85 Identities=5% Similarity=-0.031 Sum_probs=64.7
Q ss_pred hHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhh-hhhhhHHHHHHHHHHh
Q psy1645 50 GVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKK-ARESYIESELIYAYAR 123 (143)
Q Consensus 50 ~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~-~ke~~idt~Li~ayAk 123 (143)
+.|...|......|...+||+.|-+| ++|..|..+-..-.+.|+|++=+.++..|-+. -..+..=.-+..+|.+
T Consensus 14 ~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~ 93 (126)
T 4gco_A 14 QEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAACLVA 93 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHH
Confidence 45677888889999999999999664 56667777777777899999999999988764 2334444567778889
Q ss_pred cCChhhHHHHh
Q psy1645 124 TNRLADLEEFI 134 (143)
Q Consensus 124 ~~~l~ele~fl 134 (143)
.|+..+=.+++
T Consensus 94 ~~~~~~A~~~~ 104 (126)
T 4gco_A 94 MREWSKAQRAY 104 (126)
T ss_dssp TTCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 99987655443
No 127
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=88.51 E-value=2.8 Score=35.92 Aligned_cols=88 Identities=10% Similarity=-0.009 Sum_probs=64.1
Q ss_pred chhHHHHHHHHhhhhhhhHHHHHHH--HhCC----CcchHHHHHHHHHcCCChHHHHHHHHHHHhhhh--hhhHHHHHHH
Q psy1645 48 EPGVWSQLAKAQLQKGLVKESIDSF--IKAD----DPSAYMDVVETSHATESWEDLVRYLQMARKKAR--ESYIESELIY 119 (143)
Q Consensus 48 ~~~vWs~l~raqL~~~~V~eAI~sF--IkA~----dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~k--e~~idt~Li~ 119 (143)
+...|+.+-++....+.+.+|.+-| |+.. |...|..+|..+-+.|.+++-.+.+..-++..- +...=+.||-
T Consensus 104 d~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty~~Li~ 183 (501)
T 4g26_A 104 NEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAALLK 183 (501)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHH
Confidence 4455666766666677777777666 3333 566788999999999999998887775555543 4445578999
Q ss_pred HHHhcCChhhHHHHhc
Q psy1645 120 AYARTNRLADLEEFIS 135 (143)
Q Consensus 120 ayAk~~~l~ele~fl~ 135 (143)
+|+|.|+.++.++++.
T Consensus 184 ~~~~~g~~d~A~~ll~ 199 (501)
T 4g26_A 184 VSMDTKNADKVYKTLQ 199 (501)
T ss_dssp HHHHTTCHHHHHHHHH
T ss_pred HHhhCCCHHHHHHHHH
Confidence 9999999888777664
No 128
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=88.23 E-value=3.2 Score=26.56 Aligned_cols=62 Identities=10% Similarity=-0.017 Sum_probs=50.2
Q ss_pred cchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhhh
Q psy1645 47 NEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKKA 108 (143)
Q Consensus 47 ~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~ 108 (143)
+++.+|..+|......+...+|++.|-++ +++..+..+-......|+|++-+.+++.+.+..
T Consensus 17 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 83 (115)
T 2kat_A 17 DNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLAAA 83 (115)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhc
Confidence 56788999999999989999999988664 556667777777778999999999999887653
No 129
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=87.77 E-value=5.3 Score=30.52 Aligned_cols=62 Identities=16% Similarity=0.101 Sum_probs=44.0
Q ss_pred cchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhhh
Q psy1645 47 NEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKKA 108 (143)
Q Consensus 47 ~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~ 108 (143)
+++.+|..+|......+...+|++.|-++ +++..+..+-....+.|+|++=+++++.+-+..
T Consensus 36 ~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~ 102 (281)
T 2c2l_A 36 LVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLA 102 (281)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 36777888888777777888888888664 444555555566667888888888887776553
No 130
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=87.49 E-value=8.2 Score=31.79 Aligned_cols=117 Identities=9% Similarity=0.043 Sum_probs=73.7
Q ss_pred chHHHHHHHHHHHhhCCCHHHHHHHHHHHhccchhHHHHHh-------cchhHHHHHHHHhhhhhhhHHHHHHH--HhCC
Q psy1645 6 EPATHNALAKIYIDSNNNPERFLKFFLVDHLSKTPFYVLRC-------NEPGVWSQLAKAQLQKGLVKESIDSF--IKAD 76 (143)
Q Consensus 6 ~~~~~nalakIyi~~~~~~E~fl~~~Li~~~~~narYa~k~-------~~~~vWs~l~raqL~~~~V~eAI~sF--IkA~ 76 (143)
++..+.-+|.||...++..++. +.+.+. +..+.+....+-.|..++...|.+-| |++-
T Consensus 99 ~~~~~~~la~i~~~~g~~eeAL-------------~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~ 165 (310)
T 3mv2_B 99 SPYELYLLATAQAILGDLDKSL-------------ETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNA 165 (310)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHH-------------HHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHcCCHHHHH-------------HHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 3444557777777777776665 333333 67788888888888888888887777 3334
Q ss_pred Cc-------chHHHHHHH----HHcCCChHHHHHHHHHHHhhhhhhhHHHHHHHHHHhcCChhhHHHHhc
Q psy1645 77 DP-------SAYMDVVET----SHATESWEDLVRYLQMARKKARESYIESELIYAYARTNRLADLEEFIS 135 (143)
Q Consensus 77 dp-------s~y~eVie~----a~~~~~~e~Lv~yL~MaRk~~ke~~idt~Li~ayAk~~~l~ele~fl~ 135 (143)
+| +-...+.+. +...+++.+=+.+++..=++--+..--.-|.-|+-+.|++.+.|+.|.
T Consensus 166 ~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln~~~~~g~~~eAe~~L~ 235 (310)
T 3mv2_B 166 IEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLNLHLQQRNIAEAQGIVE 235 (310)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred CccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHHHHHHcCCHHHHHHHHH
Confidence 44 444555544 233458888888777643322111111234447889999999999873
No 131
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=87.44 E-value=6.8 Score=28.64 Aligned_cols=77 Identities=10% Similarity=0.033 Sum_probs=50.1
Q ss_pred chhHHHHHHHHhhh--------hhhhHHHHHHHHhC-----CCcchH-----------------HHHHHHHHcCCChHHH
Q psy1645 48 EPGVWSQLAKAQLQ--------KGLVKESIDSFIKA-----DDPSAY-----------------MDVVETSHATESWEDL 97 (143)
Q Consensus 48 ~~~vWs~l~raqL~--------~~~V~eAI~sFIkA-----~dps~y-----------------~eVie~a~~~~~~e~L 97 (143)
.+..|..+|..... .+...+|++.|-++ ++|... ..+-..-.+.|+|++=
T Consensus 88 ~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 167 (261)
T 3qky_A 88 VPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAA 167 (261)
T ss_dssp HHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred hHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHH
Confidence 35677888888877 78888888887553 222223 3344555668999999
Q ss_pred HHHHHHHHhhhhhhh----HHHHHHHHHHhc
Q psy1645 98 VRYLQMARKKARESY----IESELIYAYART 124 (143)
Q Consensus 98 v~yL~MaRk~~ke~~----idt~Li~ayAk~ 124 (143)
+.+++.+-+.-.++. .=..+..+|.++
T Consensus 168 ~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~ 198 (261)
T 3qky_A 168 AVTYEAVFDAYPDTPWADDALVGAMRAYIAY 198 (261)
T ss_dssp HHHHHHHHHHCTTSTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCchHHHHHHHHHHHHHHh
Confidence 999998876543322 233445566655
No 132
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=87.16 E-value=5.3 Score=27.12 Aligned_cols=116 Identities=9% Similarity=0.103 Sum_probs=78.7
Q ss_pred hHHHHHHHHHHHhhCCCHHHHHHHH-HHHhcc---------chhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhC-
Q psy1645 7 PATHNALAKIYIDSNNNPERFLKFF-LVDHLS---------KTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKA- 75 (143)
Q Consensus 7 ~~~~nalakIyi~~~~~~E~fl~~~-Li~~~~---------~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA- 75 (143)
...+...|+.|...+++.++.-... .++.+. ........-..+.+|..+|...+.-+...+|++.|-++
T Consensus 11 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al 90 (162)
T 3rkv_A 11 VEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVL 90 (162)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 4567789999999999998874331 222211 00111123455678999999988888888999888654
Q ss_pred ----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhhhh-hh-hHHHHHHHHHH
Q psy1645 76 ----DDPSAYMDVVETSHATESWEDLVRYLQMARKKAR-ES-YIESELIYAYA 122 (143)
Q Consensus 76 ----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~k-e~-~idt~Li~ayA 122 (143)
+++..|...-......|.|++=+.++..+-+.-- .+ .|-..|-.+..
T Consensus 91 ~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~ 143 (162)
T 3rkv_A 91 KREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTE 143 (162)
T ss_dssp HHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHH
T ss_pred hcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 6677777777788889999999999998876532 22 34444444433
No 133
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=87.08 E-value=5.5 Score=27.21 Aligned_cols=98 Identities=13% Similarity=0.066 Sum_probs=61.8
Q ss_pred hHHHHHHHHHHHhhCCCHHHHHHHHHHHhccchhHHHHHhc-ch----hHHHHHHHHhhhhhhhHHHHHHHHh-------
Q psy1645 7 PATHNALAKIYIDSNNNPERFLKFFLVDHLSKTPFYVLRCN-EP----GVWSQLAKAQLQKGLVKESIDSFIK------- 74 (143)
Q Consensus 7 ~~~~nalakIyi~~~~~~E~fl~~~Li~~~~~narYa~k~~-~~----~vWs~l~raqL~~~~V~eAI~sFIk------- 74 (143)
...+..+|.+|...++..++. . ...++.+.+.+.. ++ .+|..+|......+...+|++.|-+
T Consensus 66 ~~~~~~l~~~~~~~g~~~~A~--~----~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~ 139 (203)
T 3gw4_A 66 HRALHQVGMVERMAGNWDAAR--R----CFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQ 139 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHH--H----HHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHH--H----HHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 356788899999998888776 2 2223333333333 22 3455567666666666666555544
Q ss_pred CCCcch----HHHHHHHHHcCCChHHHHHHHHHHHhhhhh
Q psy1645 75 ADDPSA----YMDVVETSHATESWEDLVRYLQMARKKARE 110 (143)
Q Consensus 75 A~dps~----y~eVie~a~~~~~~e~Lv~yL~MaRk~~ke 110 (143)
.++|.. +..+-......|+|++=++++..+.+..++
T Consensus 140 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 179 (203)
T 3gw4_A 140 ADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAE 179 (203)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHH
Confidence 455543 345555666799999999999888866544
No 134
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=86.64 E-value=5.4 Score=26.67 Aligned_cols=82 Identities=15% Similarity=0.140 Sum_probs=57.9
Q ss_pred hhHHHHHHHHhhhhhhhHHHHHHHHh-----CCCcchHHHHHHHHHcCCChHHHHHHHHHHHhhhhhhh--------HHH
Q psy1645 49 PGVWSQLAKAQLQKGLVKESIDSFIK-----ADDPSAYMDVVETSHATESWEDLVRYLQMARKKARESY--------IES 115 (143)
Q Consensus 49 ~~vWs~l~raqL~~~~V~eAI~sFIk-----A~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~ke~~--------idt 115 (143)
...|..+|......+...+||+.|-+ -+++..|..+=..-.+.|+|++-+.+++.|-+...+.. +=.
T Consensus 8 A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~ 87 (127)
T 4gcn_A 8 AIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMS 87 (127)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHH
Confidence 34577888888888889999999955 46667777777777789999999998887766533321 222
Q ss_pred HHHHHHHhcCChhhH
Q psy1645 116 ELIYAYARTNRLADL 130 (143)
Q Consensus 116 ~Li~ayAk~~~l~el 130 (143)
.+-.+|.+.|++.+=
T Consensus 88 ~lg~~~~~~~~~~~A 102 (127)
T 4gcn_A 88 RAGNAFQKQNDLSLA 102 (127)
T ss_dssp HHHHHHHHTTCHHHH
T ss_pred HHHHHHHHcCCHHHH
Confidence 344566677776553
No 135
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=86.09 E-value=4.2 Score=24.82 Aligned_cols=93 Identities=12% Similarity=0.071 Sum_probs=70.1
Q ss_pred chHHHHHHHHHHHhhCCCHHHHHHH-HHHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHh-----CCCcc
Q psy1645 6 EPATHNALAKIYIDSNNNPERFLKF-FLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIK-----ADDPS 79 (143)
Q Consensus 6 ~~~~~nalakIyi~~~~~~E~fl~~-~Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIk-----A~dps 79 (143)
.+..+..+|.+|...++..++.-.. ..++. .-+++.+|..+|......+...+|++.|-+ .+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~---------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~ 73 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKL---------DPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGK 73 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHH---------CCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHH
Confidence 4567888999999999988876222 12221 124578899999888888888888888755 35666
Q ss_pred hHHHHHHHHHcCCChHHHHHHHHHHHhh
Q psy1645 80 AYMDVVETSHATESWEDLVRYLQMARKK 107 (143)
Q Consensus 80 ~y~eVie~a~~~~~~e~Lv~yL~MaRk~ 107 (143)
.+..+-....+.|+|++-+.+++.+.+.
T Consensus 74 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 101 (118)
T 1elw_A 74 GYSRKAAALEFLNRFEEAKRTYEEGLKH 101 (118)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHc
Confidence 7777778888899999999999987765
No 136
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=85.98 E-value=15 Score=31.18 Aligned_cols=97 Identities=12% Similarity=0.066 Sum_probs=59.5
Q ss_pred chHHHHHHHHHHHhhCCCHHHHHHHHHHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhCCCcchHHHHH
Q psy1645 6 EPATHNALAKIYIDSNNNPERFLKFFLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKADDPSAYMDVV 85 (143)
Q Consensus 6 ~~~~~nalakIyi~~~~~~E~fl~~~Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA~dps~y~eVi 85 (143)
++.++..+|..+...++...|---..-..+......-.....+++.+.++++.....+....|..+|++.+++.+ .+
T Consensus 680 ~~~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~~~~~A~~~~~~~g~~~~---a~ 756 (814)
T 3mkq_A 680 AEMKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTGKFNLAFNAYWIAGDIQG---AK 756 (814)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHH---HH
T ss_pred cHhHHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHcCchHHHHHHHHHcCCHHH---HH
Confidence 456667777777776664444311111111112222233366777888888777777888999999999887554 45
Q ss_pred HHHHcCCChHHHHHHHHHHHhhh
Q psy1645 86 ETSHATESWEDLVRYLQMARKKA 108 (143)
Q Consensus 86 e~a~~~~~~e~Lv~yL~MaRk~~ 108 (143)
+...+.+.|++=+ .+||+..
T Consensus 757 ~~~~~~~~~~~A~---~lA~~~~ 776 (814)
T 3mkq_A 757 DLLIKSQRFSEAA---FLGSTYG 776 (814)
T ss_dssp HHHHHTTCHHHHH---HHHHHTT
T ss_pred HHHHHcCChHHHH---HHHHHhC
Confidence 5567778887655 3566543
No 137
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=85.69 E-value=12 Score=32.00 Aligned_cols=105 Identities=11% Similarity=0.053 Sum_probs=76.3
Q ss_pred cchHHHHHHHHHHHhhCCCHHHHHHHHHHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHH--HhCC----Cc
Q psy1645 5 TEPATHNALAKIYIDSNNNPERFLKFFLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSF--IKAD----DP 78 (143)
Q Consensus 5 ~~~~~~nalakIyi~~~~~~E~fl~~~Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sF--IkA~----dp 78 (143)
.+..+||++-..|.+.+...+++-.+.-+.. ++ -.-+...|+.+-.+....+.+.+|.+-| |... |.
T Consensus 103 Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~--~g-----~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~ 175 (501)
T 4g26_A 103 PNEATFTNGARLAVAKDDPEMAFDMVKQMKA--FG-----IQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEE 175 (501)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH--TT-----CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCH
T ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHH--cC-----CCCccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCH
Confidence 3677899999999999988888733322211 11 0124455677766666677777776655 3333 67
Q ss_pred chHHHHHHHHHcCCChHHHHHHHHHHHhhhhhhhHHHH
Q psy1645 79 SAYMDVVETSHATESWEDLVRYLQMARKKARESYIESE 116 (143)
Q Consensus 79 s~y~eVie~a~~~~~~e~Lv~yL~MaRk~~ke~~idt~ 116 (143)
..|..+|..+-++|.+++..++|+.-|.....|-..|-
T Consensus 176 ~ty~~Li~~~~~~g~~d~A~~ll~~Mr~~g~~ps~~T~ 213 (501)
T 4g26_A 176 PELAALLKVSMDTKNADKVYKTLQRLRDLVRQVSKSTF 213 (501)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSBCHHHH
T ss_pred HHHHHHHHHHhhCCCHHHHHHHHHHHHHhCCCcCHHHH
Confidence 78999999999999999999999999998888877765
No 138
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=85.28 E-value=4.5 Score=27.49 Aligned_cols=91 Identities=13% Similarity=0.031 Sum_probs=64.2
Q ss_pred HHhcchhHHHHHHHHhhhhhhhHHHHHHHHhCCC-----------------------cchHHHHHHHHHcCCChHHHHHH
Q psy1645 44 LRCNEPGVWSQLAKAQLQKGLVKESIDSFIKADD-----------------------PSAYMDVVETSHATESWEDLVRY 100 (143)
Q Consensus 44 ~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA~d-----------------------ps~y~eVie~a~~~~~~e~Lv~y 100 (143)
++.+....|...|......+...+||+.|-+|=. +..|..+-....+.|.|++-+.+
T Consensus 6 e~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~ 85 (162)
T 3rkv_A 6 DKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEET 85 (162)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHH
Confidence 3455677788889888888888888888866532 24566666666778999999999
Q ss_pred HHHHHhh-hhhhhHHHHHHHHHHhcCChhhHHHHh
Q psy1645 101 LQMARKK-ARESYIESELIYAYARTNRLADLEEFI 134 (143)
Q Consensus 101 L~MaRk~-~ke~~idt~Li~ayAk~~~l~ele~fl 134 (143)
+..|-+. -..+..=.-+..+|.++|+..+=...+
T Consensus 86 ~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~ 120 (162)
T 3rkv_A 86 SSEVLKREETNEKALFRRAKARIAAWKLDEAEEDL 120 (162)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHH
Confidence 9887664 234444556777888999976654443
No 139
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=85.25 E-value=6.5 Score=26.27 Aligned_cols=95 Identities=7% Similarity=0.086 Sum_probs=66.3
Q ss_pred HHHHHHHHHHhhCCCHHHHHHH-HHHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcch--
Q psy1645 9 THNALAKIYIDSNNNPERFLKF-FLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSA-- 80 (143)
Q Consensus 9 ~~nalakIyi~~~~~~E~fl~~-~Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~-- 80 (143)
.|..+|++|...+++.++.-.+ .-|+.-+ +.+..|..+|...+..+...+||+.|-+| +.+..
T Consensus 10 a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p---------~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~ 80 (127)
T 4gcn_A 10 AEKDLGNAAYKQKDFEKAHVHYDKAIELDP---------SNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYK 80 (127)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---------CCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhH
Confidence 4678999999999998887333 2344322 35778999999999989999999998775 22222
Q ss_pred -----HHHHHHHHHcCCChHHHHHHHHHHHhhhhhhh
Q psy1645 81 -----YMDVVETSHATESWEDLVRYLQMARKKARESY 112 (143)
Q Consensus 81 -----y~eVie~a~~~~~~e~Lv~yL~MaRk~~ke~~ 112 (143)
|..+=..-...|+|++=+.+++.+=+..++|.
T Consensus 81 ~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~~~ 117 (127)
T 4gcn_A 81 LIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRDPE 117 (127)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCCHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCHH
Confidence 33333344568899999998887655445544
No 140
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=84.46 E-value=6.9 Score=25.96 Aligned_cols=85 Identities=12% Similarity=0.013 Sum_probs=63.6
Q ss_pred hHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhh-hhhhhHHHHHHHHHHh
Q psy1645 50 GVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKK-ARESYIESELIYAYAR 123 (143)
Q Consensus 50 ~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~-~ke~~idt~Li~ayAk 123 (143)
+-|-.+|...+..+...+|+..|-++ +++..+..+=....+.|+|++=+.+++.|-+. -..+..=..|..+|.+
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~ 97 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN 97 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 45778888888889999999998655 56666666667777899999999999877654 2344455667788888
Q ss_pred cCChhhHHHHh
Q psy1645 124 TNRLADLEEFI 134 (143)
Q Consensus 124 ~~~l~ele~fl 134 (143)
.|+..+-.+.+
T Consensus 98 ~g~~~~A~~~~ 108 (121)
T 1hxi_A 98 EHNANAALASL 108 (121)
T ss_dssp HHHHHHHHHHH
T ss_pred cCCHHHHHHHH
Confidence 88876655444
No 141
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=84.41 E-value=6 Score=25.20 Aligned_cols=63 Identities=22% Similarity=0.303 Sum_probs=47.4
Q ss_pred CcchHHHHHHHHHHHhhCCCHHHHHHH-HHHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhC
Q psy1645 4 CTEPATHNALAKIYIDSNNNPERFLKF-FLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKA 75 (143)
Q Consensus 4 ~~~~~~~nalakIyi~~~~~~E~fl~~-~Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA 75 (143)
-.++..+..+|.+|...+++.++--.+ ..++. .-+.+..|..+|......+...+|++.|-++
T Consensus 4 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~---------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~a 67 (100)
T 3ma5_A 4 PEDPFTRYALAQEHLKHDNASRALALFEELVET---------DPDYVGTYYHLGKLYERLDRTDDAIDTYAQG 67 (100)
T ss_dssp -CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---------STTCTHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 356788999999999999998886222 12222 1246779999999999999999999887653
No 142
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=83.51 E-value=11 Score=30.80 Aligned_cols=80 Identities=10% Similarity=0.141 Sum_probs=54.5
Q ss_pred cchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhh-hhhhhHHHHHHHH
Q psy1645 47 NEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKK-ARESYIESELIYA 120 (143)
Q Consensus 47 ~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~-~ke~~idt~Li~a 120 (143)
+.+.+|..+|......+...+|++.|-+| +++..+..+-....+.|.|++=+.++..+-+. -+.+..=.-+.++
T Consensus 164 ~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~ 243 (382)
T 2h6f_A 164 KNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFV 243 (382)
T ss_dssp TCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 35678888888777777788888888654 55666666666667778888877777765543 3444455566677
Q ss_pred HHh-cCC
Q psy1645 121 YAR-TNR 126 (143)
Q Consensus 121 yAk-~~~ 126 (143)
|.+ .|+
T Consensus 244 l~~l~~~ 250 (382)
T 2h6f_A 244 ISNTTGY 250 (382)
T ss_dssp HHHTTCS
T ss_pred HHHhcCc
Confidence 777 555
No 143
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=83.50 E-value=4.3 Score=31.70 Aligned_cols=96 Identities=10% Similarity=0.026 Sum_probs=63.2
Q ss_pred hHHHHHHHHHHHhhCCCHHHHHHHHHHHhccchhHHHHHhcch----hHHHHHHHHhhhhhhhHHHHHHHHhC-------
Q psy1645 7 PATHNALAKIYIDSNNNPERFLKFFLVDHLSKTPFYVLRCNEP----GVWSQLAKAQLQKGLVKESIDSFIKA------- 75 (143)
Q Consensus 7 ~~~~nalakIyi~~~~~~E~fl~~~Li~~~~~narYa~k~~~~----~vWs~l~raqL~~~~V~eAI~sFIkA------- 75 (143)
...++.+|.+|.+.+++.++- .+ ..++.+.+.+.+++ .++..+|......+...+|++.|-+|
T Consensus 182 ~~~~~~lg~~y~~~~~~~~A~--~~----~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~ 255 (378)
T 3q15_A 182 IQSLFVIAGNYDDFKHYDKAL--PH----LEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREK 255 (378)
T ss_dssp HHHHHHHHHHHHHTTCHHHHH--HH----HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHH--HH----HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhh
Confidence 456788999999999988876 22 22333333333333 34555777777777777777777665
Q ss_pred CCcch---HHHHHHHHHcCCChHHHHHHHHHHHhhh
Q psy1645 76 DDPSA---YMDVVETSHATESWEDLVRYLQMARKKA 108 (143)
Q Consensus 76 ~dps~---y~eVie~a~~~~~~e~Lv~yL~MaRk~~ 108 (143)
++|.. +..+-....+.|++++=+.|++.+-+..
T Consensus 256 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 291 (378)
T 3q15_A 256 VPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHI 291 (378)
T ss_dssp CGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred CChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 55554 3344445566899999999988887653
No 144
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=83.29 E-value=11 Score=27.45 Aligned_cols=122 Identities=11% Similarity=0.035 Sum_probs=81.3
Q ss_pred CcchHHHHHHHHHHHhhCCCHHHHHHH-HHHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CC
Q psy1645 4 CTEPATHNALAKIYIDSNNNPERFLKF-FLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DD 77 (143)
Q Consensus 4 ~~~~~~~nalakIyi~~~~~~E~fl~~-~Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~d 77 (143)
..++..+..+|..|.+.+++.++.-.+ .+++.-+.+ ...++.|..+|......+.-.+|++.|-++ ++
T Consensus 12 ~~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~------~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~ 85 (261)
T 3qky_A 12 HSSPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTH------EWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQID 85 (261)
T ss_dssp CSSHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCS------TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred CCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC------cchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCC
Confidence 346677888999999999998887333 133322221 112778899999999888888888888654 22
Q ss_pred c---chHHHHHHHHHc--------CCChHHHHHHHHHHHhhh-hhhhHH-----------------HHHHHHHHhcCChh
Q psy1645 78 P---SAYMDVVETSHA--------TESWEDLVRYLQMARKKA-RESYIE-----------------SELIYAYARTNRLA 128 (143)
Q Consensus 78 p---s~y~eVie~a~~--------~~~~e~Lv~yL~MaRk~~-ke~~id-----------------t~Li~ayAk~~~l~ 128 (143)
| ..+..+-..-.. .|+|++=+.++..+-+.- ..+... -.+..+|.+.|+..
T Consensus 86 ~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 165 (261)
T 3qky_A 86 PRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYE 165 (261)
T ss_dssp TTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred chhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHH
Confidence 2 234444444445 789999898888776543 233444 45677888999976
Q ss_pred hHH
Q psy1645 129 DLE 131 (143)
Q Consensus 129 ele 131 (143)
+-.
T Consensus 166 ~A~ 168 (261)
T 3qky_A 166 AAA 168 (261)
T ss_dssp HHH
T ss_pred HHH
Confidence 533
No 145
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=83.21 E-value=4.1 Score=26.06 Aligned_cols=63 Identities=13% Similarity=0.124 Sum_probs=46.1
Q ss_pred CcchHHHHHHHHHHHhhCCCHHHHHHH-HHHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhC
Q psy1645 4 CTEPATHNALAKIYIDSNNNPERFLKF-FLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKA 75 (143)
Q Consensus 4 ~~~~~~~nalakIyi~~~~~~E~fl~~-~Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA 75 (143)
..++..+..+|.+|...++..++.-.. ..++. .-+.+..|..+|......+...+|++.|-++
T Consensus 16 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~---------~p~~~~~~~~la~~~~~~g~~~~A~~~~~~a 79 (115)
T 2kat_A 16 TDNMLLRFTLGKTYAEHEQFDAALPHLRAALDF---------DPTYSVAWKWLGKTLQGQGDRAGARQAWESG 79 (115)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHH---------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 356788999999999999988876222 12221 1245778999999998888999999876554
No 146
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=82.39 E-value=3.1 Score=26.96 Aligned_cols=61 Identities=8% Similarity=-0.005 Sum_probs=50.0
Q ss_pred cchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhh
Q psy1645 47 NEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKK 107 (143)
Q Consensus 47 ~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~ 107 (143)
+.+..|..+|......+...+|++.|-++ ++|..+..+-....+.|+|++=+.+++.+-+.
T Consensus 25 ~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 90 (117)
T 3k9i_A 25 DLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGVELLLKIIAE 90 (117)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 45678888999988888999999999764 66777777777888899999999988877654
No 147
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=82.12 E-value=7.5 Score=24.65 Aligned_cols=58 Identities=7% Similarity=0.001 Sum_probs=33.1
Q ss_pred hHHHHHHHHhhhhhhhHHHHHHHHhC-----CC---cchHHHHHHHHHcCCChHHHHHHHHHHHhh
Q psy1645 50 GVWSQLAKAQLQKGLVKESIDSFIKA-----DD---PSAYMDVVETSHATESWEDLVRYLQMARKK 107 (143)
Q Consensus 50 ~vWs~l~raqL~~~~V~eAI~sFIkA-----~d---ps~y~eVie~a~~~~~~e~Lv~yL~MaRk~ 107 (143)
..|..+|......+...+|++.|-++ ++ |..+..+-..-.+.|+|++=+.+++.+-+.
T Consensus 40 ~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~ 105 (129)
T 2xev_A 40 NALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQ 105 (129)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 46666666666666666666666443 22 333444445555566666666666655544
No 148
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=82.06 E-value=7.6 Score=24.64 Aligned_cols=83 Identities=11% Similarity=-0.001 Sum_probs=50.4
Q ss_pred HHHHHHHHhhhhhhhHHHHHHHHhC-----CCc---chHHHHHHHHHcCCChHHHHHHHHHHHhhhhh----hhHHHHHH
Q psy1645 51 VWSQLAKAQLQKGLVKESIDSFIKA-----DDP---SAYMDVVETSHATESWEDLVRYLQMARKKARE----SYIESELI 118 (143)
Q Consensus 51 vWs~l~raqL~~~~V~eAI~sFIkA-----~dp---s~y~eVie~a~~~~~~e~Lv~yL~MaRk~~ke----~~idt~Li 118 (143)
.|-.+|...+..+...+|++.|-++ ++| ..+..+-....+.|+|++-+.++..+-+...+ +..=-.+.
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la 83 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLG 83 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHH
Confidence 3445566666666666666666542 333 34555556666788888888888877655322 33344566
Q ss_pred HHHHhcCChhhHHHH
Q psy1645 119 YAYARTNRLADLEEF 133 (143)
Q Consensus 119 ~ayAk~~~l~ele~f 133 (143)
.+|.+.|+..+-.++
T Consensus 84 ~~~~~~g~~~~A~~~ 98 (129)
T 2xev_A 84 LSQYGEGKNTEAQQT 98 (129)
T ss_dssp HHHHHTTCHHHHHHH
T ss_pred HHHHHcCCHHHHHHH
Confidence 777888887654443
No 149
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=82.04 E-value=5.8 Score=24.39 Aligned_cols=61 Identities=13% Similarity=0.096 Sum_probs=46.2
Q ss_pred chHHHHHHHHHHHhhCCCHHHHHHH-HHHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhC
Q psy1645 6 EPATHNALAKIYIDSNNNPERFLKF-FLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKA 75 (143)
Q Consensus 6 ~~~~~nalakIyi~~~~~~E~fl~~-~Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA 75 (143)
+...+..+|.+|...+++.++.-.. ..++.- -+.+.+|..+|......+...+|++.|-++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~---------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 64 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQ---------PQNPVGYSNKAMALIKLGEYTQAIQMCQQG 64 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC---------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC---------CCCHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 4567889999999999998887222 133322 235788999999998888999999888764
No 150
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=80.90 E-value=6.3 Score=25.45 Aligned_cols=61 Identities=10% Similarity=0.001 Sum_probs=45.4
Q ss_pred chHHHHHHHHHHHhhCCCHHHHHHH-HHHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhC
Q psy1645 6 EPATHNALAKIYIDSNNNPERFLKF-FLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKA 75 (143)
Q Consensus 6 ~~~~~nalakIyi~~~~~~E~fl~~-~Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA 75 (143)
.+..+..+|.+|...+++.++.-.. ..++. .-+.+.+|..+|......+...+|++.|-++
T Consensus 26 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~---------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 87 (117)
T 3k9i_A 26 LAECYLGLGSTFRTLGEYRKAEAVLANGVKQ---------FPNHQALRVFYAMVLYNLGRYEQGVELLLKI 87 (117)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---------CCCchHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 4577889999999999998887222 12222 1245889999999988888899999877654
No 151
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=80.77 E-value=16 Score=27.69 Aligned_cols=29 Identities=21% Similarity=0.190 Sum_probs=22.9
Q ss_pred cchhHHHHHHHHhhhhhhhHHHHHHHHhC
Q psy1645 47 NEPGVWSQLAKAQLQKGLVKESIDSFIKA 75 (143)
Q Consensus 47 ~~~~vWs~l~raqL~~~~V~eAI~sFIkA 75 (143)
+.+..|..+|......+...+|++.|-++
T Consensus 70 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 98 (281)
T 2c2l_A 70 QSVKAHFFLGQCQLEMESYDEAIANLQRA 98 (281)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 45677888888888888888888888654
No 152
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=80.39 E-value=13 Score=28.00 Aligned_cols=115 Identities=10% Similarity=0.020 Sum_probs=67.8
Q ss_pred HHHHHHHHHHhhCCCHHHHHHH-HHHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhCC--------Ccc
Q psy1645 9 THNALAKIYIDSNNNPERFLKF-FLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKAD--------DPS 79 (143)
Q Consensus 9 ~~nalakIyi~~~~~~E~fl~~-~Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA~--------dps 79 (143)
.|..++.+|...+++.++.--. ..++........ .....+|..+|......+.-..|++.|-+|= ++.
T Consensus 117 ~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~---~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~ 193 (293)
T 3u3w_A 117 WQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDV---YQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEE 193 (293)
T ss_dssp HHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCT---THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHH
T ss_pred HHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccH---HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchh
Confidence 4556777777666666554111 122211110000 0112367778877777777777777776653 332
Q ss_pred ----hHHHHHHHHHcCCChHHHHHHHHHHHhhhhh-------hhHHHHHHHHHHhcCC
Q psy1645 80 ----AYMDVVETSHATESWEDLVRYLQMARKKARE-------SYIESELIYAYARTNR 126 (143)
Q Consensus 80 ----~y~eVie~a~~~~~~e~Lv~yL~MaRk~~ke-------~~idt~Li~ayAk~~~ 126 (143)
.|..+-....+.|+|++-+.|++.|-+..++ +.+=..+-.+|-+.|+
T Consensus 194 ~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~ 251 (293)
T 3u3w_A 194 FDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEY 251 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCC
Confidence 3445556667799999999999887765433 3344556778888885
No 153
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=79.77 E-value=17 Score=28.51 Aligned_cols=90 Identities=8% Similarity=0.014 Sum_probs=69.3
Q ss_pred HhcchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CC---------------cchHHHHHHHHHcCCChHHHHHHHHHH
Q psy1645 45 RCNEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DD---------------PSAYMDVVETSHATESWEDLVRYLQMA 104 (143)
Q Consensus 45 k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~d---------------ps~y~eVie~a~~~~~~e~Lv~yL~Ma 104 (143)
+-+.+..|..+|......+...+|++.|-+| ++ +..|..+-....+.|+|++-+.++..|
T Consensus 143 ~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~a 222 (336)
T 1p5q_A 143 KLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKA 222 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 4456778889999999999999999999765 34 356777777777899999999999988
Q ss_pred Hhhh-hhhhHHHHHHHHHHhcCChhhHHHHh
Q psy1645 105 RKKA-RESYIESELIYAYARTNRLADLEEFI 134 (143)
Q Consensus 105 Rk~~-ke~~idt~Li~ayAk~~~l~ele~fl 134 (143)
-+.- ..+..=..+..+|.+.|+..+-.+++
T Consensus 223 l~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~ 253 (336)
T 1p5q_A 223 LELDSNNEKGLSRRGEAHLAVNDFELARADF 253 (336)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHhCCCcHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 7653 34555667788899999987654443
No 154
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=79.45 E-value=9.9 Score=30.78 Aligned_cols=93 Identities=6% Similarity=-0.039 Sum_probs=68.5
Q ss_pred HHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhCC---------------------CcchHHHHHHHHHcCCChHHHHHH
Q psy1645 42 YVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKAD---------------------DPSAYMDVVETSHATESWEDLVRY 100 (143)
Q Consensus 42 Ya~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA~---------------------dps~y~eVie~a~~~~~~e~Lv~y 100 (143)
+....+....|..+|......+...+|++.|-+|= ++..|..+-....+.|+|++-+.+
T Consensus 216 ~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~ 295 (370)
T 1ihg_A 216 VDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDS 295 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHH
Confidence 44455566778889998888888899998887663 244556666666779999999999
Q ss_pred HHHHHhhh-hhhhHHHHHHHHHHhcCChhhHHHHh
Q psy1645 101 LQMARKKA-RESYIESELIYAYARTNRLADLEEFI 134 (143)
Q Consensus 101 L~MaRk~~-ke~~idt~Li~ayAk~~~l~ele~fl 134 (143)
+..|-+.- ..+..=.-+..+|.+.|+..+-.+.+
T Consensus 296 ~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l 330 (370)
T 1ihg_A 296 CLEALEIDPSNTKALYRRAQGWQGLKEYDQALADL 330 (370)
T ss_dssp HHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHH
Confidence 99888753 34555566778899999987654443
No 155
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=78.95 E-value=19 Score=27.34 Aligned_cols=66 Identities=11% Similarity=0.063 Sum_probs=40.3
Q ss_pred HHHHHHHHh-----CCCcchHHHHHHHHHcCCChHHHHHHHHHHHhhh---hhhhHHHHHHHHHHhcCChhhHH
Q psy1645 66 KESIDSFIK-----ADDPSAYMDVVETSHATESWEDLVRYLQMARKKA---RESYIESELIYAYARTNRLADLE 131 (143)
Q Consensus 66 ~eAI~sFIk-----A~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~---ke~~idt~Li~ayAk~~~l~ele 131 (143)
.+|+..|-+ -+++..+..+-....+.|.|++=+..|.-+-+.- .++..=..|.-+|...|+.++..
T Consensus 202 ~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~a~ 275 (287)
T 3qou_A 202 TPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGDALA 275 (287)
T ss_dssp CHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTCHHH
T ss_pred CccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCCcHH
Confidence 445555533 2455666666666667788877776666554432 22555667777777878766543
No 156
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=78.69 E-value=16 Score=26.36 Aligned_cols=118 Identities=14% Similarity=0.034 Sum_probs=58.7
Q ss_pred chHHHHHHHHHHHhhCCCHHHHHHHH----------------HHHh------ccchh---HHHHHhcchhHHHHHHHHhh
Q psy1645 6 EPATHNALAKIYIDSNNNPERFLKFF----------------LVDH------LSKTP---FYVLRCNEPGVWSQLAKAQL 60 (143)
Q Consensus 6 ~~~~~nalakIyi~~~~~~E~fl~~~----------------Li~~------~~~na---rYa~k~~~~~vWs~l~raqL 60 (143)
++..+..+|.+|...++..+++--+. +... ..++. +=|.+...+.-+..||....
T Consensus 17 ~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~g~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~A~~~g~~~a~~~Lg~~y~ 96 (212)
T 3rjv_A 17 DRRAQYYLADTWVSSGDYQKAEYWAQKAAAQGDGDALALLAQLKIRNPQQADYPQARQLAEKAVEAGSKSGEIVLARVLV 96 (212)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCHHHHHHHHHHTTSSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 56677889999999888777772221 0000 00111 12233344555555555554
Q ss_pred h----hhhhHHHHHHHHhCCC-------cchHHHHHHHHHc----CCChHHHHHHHHHHHhhhhhhhHHHHHHHHHHh
Q psy1645 61 Q----KGLVKESIDSFIKADD-------PSAYMDVVETSHA----TESWEDLVRYLQMARKKARESYIESELIYAYAR 123 (143)
Q Consensus 61 ~----~~~V~eAI~sFIkA~d-------ps~y~eVie~a~~----~~~~e~Lv~yL~MaRk~~ke~~idt~Li~ayAk 123 (143)
. .+....|++.|-+|-+ |..+..+=..-.+ .++++.=+.|++.|-+....+.--..|-.+|.+
T Consensus 97 ~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~a~~~Lg~~y~~ 174 (212)
T 3rjv_A 97 NRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSLSRTGYAEYWAGMMFQQ 174 (212)
T ss_dssp CGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHTSCTTHHHHHHHHHHHH
T ss_pred cCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHc
Confidence 4 3344666666655432 2223333222223 445566666666555444455544445555544
No 157
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=78.30 E-value=19 Score=26.98 Aligned_cols=81 Identities=11% Similarity=-0.046 Sum_probs=55.0
Q ss_pred HHHHHhhhhhhhHHHHHHHHhC-------CCcc----hHHHHHHHHHcCCChHHHHHHHHHHHhhhh----hh----hHH
Q psy1645 54 QLAKAQLQKGLVKESIDSFIKA-------DDPS----AYMDVVETSHATESWEDLVRYLQMARKKAR----ES----YIE 114 (143)
Q Consensus 54 ~l~raqL~~~~V~eAI~sFIkA-------~dps----~y~eVie~a~~~~~~e~Lv~yL~MaRk~~k----e~----~id 114 (143)
.+|......+...+|++.|-+| .++. .|..+-..-...|+|++-+.|++.|-+..+ ++ .+=
T Consensus 120 ~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~ 199 (293)
T 2qfc_A 120 YVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVR 199 (293)
T ss_dssp HHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHH
Confidence 3566666666778999988766 3433 344445555669999999999998874322 22 344
Q ss_pred HHHHHHHHhcCChhhHHHHh
Q psy1645 115 SELIYAYARTNRLADLEEFI 134 (143)
Q Consensus 115 t~Li~ayAk~~~l~ele~fl 134 (143)
..+..+|.+.|+..+-.+++
T Consensus 200 ~nlg~~y~~~~~y~~Al~~~ 219 (293)
T 2qfc_A 200 YNHAKALYLDSRYEESLYQV 219 (293)
T ss_dssp HHHHHHHHHTTCHHHHHHHH
T ss_pred HhHHHHHHHHhhHHHHHHHH
Confidence 56777889999987766554
No 158
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=77.92 E-value=27 Score=28.52 Aligned_cols=118 Identities=4% Similarity=-0.029 Sum_probs=83.2
Q ss_pred hHHHHHHHHHHHhhCCCHHHHHHH-HHHHhccchhHHHHHhcchhHHHHHHHHhhhhhh-hHHHHHHHHhC-----CCcc
Q psy1645 7 PATHNALAKIYIDSNNNPERFLKF-FLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGL-VKESIDSFIKA-----DDPS 79 (143)
Q Consensus 7 ~~~~nalakIyi~~~~~~E~fl~~-~Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~-V~eAI~sFIkA-----~dps 79 (143)
+..|+-++.+|...+++.++.-.. ..|+.-+ +.+.+|..+|......+. ..+||+.|-++ +++.
T Consensus 97 ~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P---------~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~ 167 (382)
T 2h6f_A 97 RDVYDYFRAVLQRDERSERAFKLTRDAIELNA---------ANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQ 167 (382)
T ss_dssp HHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCT---------TCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHHHCCChHHHHHHHHHHHHhCc---------cCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHH
Confidence 567888999999999999988332 1333222 356789999988888887 99999998664 5556
Q ss_pred hHHHHHHHHHcCCChHHHHHHHHHHHhh-hhhhhHHHHHHHHHHhcCChhhHHHH
Q psy1645 80 AYMDVVETSHATESWEDLVRYLQMARKK-ARESYIESELIYAYARTNRLADLEEF 133 (143)
Q Consensus 80 ~y~eVie~a~~~~~~e~Lv~yL~MaRk~-~ke~~idt~Li~ayAk~~~l~ele~f 133 (143)
.+...-......|.|++=+.++..|=+. -+.+..=.-+..+|.+.|+..+=.++
T Consensus 168 a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~eAl~~ 222 (382)
T 2h6f_A 168 VWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQY 222 (382)
T ss_dssp HHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChHHHHHH
Confidence 6666666666778888888777765443 34445556677888888887654433
No 159
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=77.50 E-value=16 Score=26.15 Aligned_cols=53 Identities=11% Similarity=0.028 Sum_probs=43.5
Q ss_pred HHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhh
Q psy1645 55 LAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKK 107 (143)
Q Consensus 55 l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~ 107 (143)
+|......+...+|++.|-++ +++..+..+-......|+|++=+.++..+-+.
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 117 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQL 117 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 888888888999999988653 66777777777778899999999998877654
No 160
>1ylm_A Hypothetical protein BSU32300; MCSG, structural genomics, hypothetical cytosolic protein, PSI, protein structure initiative; 1.83A {Bacillus subtilis subsp}
Probab=73.78 E-value=9.4 Score=27.15 Aligned_cols=61 Identities=15% Similarity=0.260 Sum_probs=47.7
Q ss_pred HhCCCcchHHHHHHHHHcCCChHH--HHHHHHHHH--hh-hhh-hhHHHHHHHHHHhcCChhhHHHHh
Q psy1645 73 IKADDPSAYMDVVETSHATESWED--LVRYLQMAR--KK-ARE-SYIESELIYAYARTNRLADLEEFI 134 (143)
Q Consensus 73 IkA~dps~y~eVie~a~~~~~~e~--Lv~yL~MaR--k~-~ke-~~idt~Li~ayAk~~~l~ele~fl 134 (143)
.+...|+.|.++++.+.+.|--.+ -.+|..|++ +. +.+ -.||.+.++.-.+. .+.+|++|+
T Consensus 60 ~~~~~p~sy~d~~~~L~~~gvi~~~~~~~~~~m~g~RN~lvH~Y~~id~~~v~~~i~~-~l~~l~~~~ 126 (144)
T 1ylm_A 60 FIMRDPGSYDDIMDILVDEKVVTEKEGDELKKLIAYRKTLVQQYLLADSGELYRLIKA-HQTALQDFP 126 (144)
T ss_dssp TTCCCCSSGGGHHHHHHHTTSSCHHHHHHHHHHHTTHHHHHTCGGGCCHHHHHHHHHH-THHHHHHHH
T ss_pred cCCCCCCCHHHHHHHHHHCCCcCHHHHHHHHHHHHHHhHHhcCccccCHHHHHHHHHH-hHHHHHHHH
Confidence 455799999999999999996644 678888875 33 333 66899999988877 689988885
No 161
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=73.73 E-value=22 Score=25.40 Aligned_cols=29 Identities=21% Similarity=0.283 Sum_probs=24.5
Q ss_pred cchhHHHHHHHHhhhhhhhHHHHHHHHhC
Q psy1645 47 NEPGVWSQLAKAQLQKGLVKESIDSFIKA 75 (143)
Q Consensus 47 ~~~~vWs~l~raqL~~~~V~eAI~sFIkA 75 (143)
++++.|..+|......+...+|++.|=++
T Consensus 86 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 114 (208)
T 3urz_A 86 NNVDCLEACAEMQVCRGQEKDALRMYEKI 114 (208)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 46788888999998889999999988664
No 162
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=72.75 E-value=18 Score=28.46 Aligned_cols=100 Identities=8% Similarity=0.075 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHhhCCCHHHHHHH-HHHHhccchhHH--------HHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhC---
Q psy1645 8 ATHNALAKIYIDSNNNPERFLKF-FLVDHLSKTPFY--------VLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKA--- 75 (143)
Q Consensus 8 ~~~nalakIyi~~~~~~E~fl~~-~Li~~~~~narY--------a~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA--- 75 (143)
..+..+|.+|...+++.++.-.. ..++..+.+..| +...-...+|..+|...+..+...+|++.|-++
T Consensus 180 ~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 259 (338)
T 2if4_A 180 DRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTE 259 (338)
T ss_dssp HHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 45778899999999998887333 233333322211 011112248888999988888889999998775
Q ss_pred --CCcchHHHHHHHHHcCCChHHHHHHHHHHHhh
Q psy1645 76 --DDPSAYMDVVETSHATESWEDLVRYLQMARKK 107 (143)
Q Consensus 76 --~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~ 107 (143)
+++..|..+-......|+|++-+.+|+.+.+.
T Consensus 260 ~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l 293 (338)
T 2if4_A 260 EEKNPKALFRRGKAKAELGQMDSARDDFRKAQKY 293 (338)
T ss_dssp CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 66777888888888899999999999876543
No 163
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=72.18 E-value=16 Score=23.82 Aligned_cols=53 Identities=9% Similarity=0.112 Sum_probs=39.8
Q ss_pred chHHHHHHHHHcCCChHHHHHHHHHHHhhhh--------hhhHHHHHHHHHHhcCChhhHH
Q psy1645 79 SAYMDVVETSHATESWEDLVRYLQMARKKAR--------ESYIESELIYAYARTNRLADLE 131 (143)
Q Consensus 79 s~y~eVie~a~~~~~~e~Lv~yL~MaRk~~k--------e~~idt~Li~ayAk~~~l~ele 131 (143)
.+.-++=..+.+.|.|+.=+.|++.|.+... .+.|-.-|.+||.+.|++.+--
T Consensus 6 ~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~ 66 (104)
T 2v5f_A 6 EDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKAL 66 (104)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHH
Confidence 3445666777789999999999999987642 3455667889999999876543
No 164
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=71.47 E-value=15 Score=32.15 Aligned_cols=87 Identities=9% Similarity=-0.039 Sum_probs=68.6
Q ss_pred cchhHHHHHHHHhhhhhhhHHHHHHHHh-----CCCcchHHHHHHHHHcCCChHHHHHHHHHHHhh-hhhhhHHHHHHHH
Q psy1645 47 NEPGVWSQLAKAQLQKGLVKESIDSFIK-----ADDPSAYMDVVETSHATESWEDLVRYLQMARKK-ARESYIESELIYA 120 (143)
Q Consensus 47 ~~~~vWs~l~raqL~~~~V~eAI~sFIk-----A~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~-~ke~~idt~Li~a 120 (143)
+.++.|..+|+..+..+...+|++.|-+ -+++..+...=....+.|+|++=+.+++.|-+. -..+..=..|..+
T Consensus 431 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~ 510 (681)
T 2pzi_A 431 ESVELPLMEVRALLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAAT 510 (681)
T ss_dssp TCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHH
T ss_pred cchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 4668999999999999999999998854 456666777767777899999999999877654 3455666788889
Q ss_pred HHhcCChhhHHHHh
Q psy1645 121 YARTNRLADLEEFI 134 (143)
Q Consensus 121 yAk~~~l~ele~fl 134 (143)
|.+.|+..+ .+..
T Consensus 511 ~~~~g~~~~-~~~~ 523 (681)
T 2pzi_A 511 AELAGNTDE-HKFY 523 (681)
T ss_dssp HHHHTCCCT-TCHH
T ss_pred HHHcCChHH-HHHH
Confidence 999999888 5543
No 165
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=71.41 E-value=9.8 Score=31.84 Aligned_cols=115 Identities=8% Similarity=0.037 Sum_probs=75.8
Q ss_pred HHHHHHHHHhhCCCHHHHHHH-HHHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHH
Q psy1645 10 HNALAKIYIDSNNNPERFLKF-FLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMD 83 (143)
Q Consensus 10 ~nalakIyi~~~~~~E~fl~~-~Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~e 83 (143)
+..+|.+|...+++.++.-.. ..++. .-+.+.+|..+|......+...+|++.|-+| +++..+..
T Consensus 9 ~~~lg~~~~~~g~~~~A~~~~~~Al~~---------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~ 79 (477)
T 1wao_1 9 LKTQANDYFKAKDYENAIKFYSQAIEL---------NPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYR 79 (477)
T ss_dssp SSSSSSSTTTTTCHHHHHHHHHHHHHH---------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHh---------CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 344566777777777765111 12221 2345789999999999999999999999775 56667777
Q ss_pred HHHHHHcCCChHHHHHHHHHHHhhh-hhhhHHHHHHHH--HHhcCChhhHHHH
Q psy1645 84 VVETSHATESWEDLVRYLQMARKKA-RESYIESELIYA--YARTNRLADLEEF 133 (143)
Q Consensus 84 Vie~a~~~~~~e~Lv~yL~MaRk~~-ke~~idt~Li~a--yAk~~~l~ele~f 133 (143)
+-....+.|+|++=+++++.|-+.. ..+..-..+..+ |.+.|+..+-.+.
T Consensus 80 lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~~g~~~~A~~~ 132 (477)
T 1wao_1 80 RAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAG 132 (477)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHHHHHHCCC---
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 7777778999999999999887653 233333344444 6666665554443
No 166
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=69.98 E-value=31 Score=25.61 Aligned_cols=98 Identities=11% Similarity=-0.053 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHhhCCCHHHHHHH-HHHHhccchhH----HHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhC-------
Q psy1645 8 ATHNALAKIYIDSNNNPERFLKF-FLVDHLSKTPF----YVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKA------- 75 (143)
Q Consensus 8 ~~~nalakIyi~~~~~~E~fl~~-~Li~~~~~nar----Ya~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA------- 75 (143)
..+...|..+.+.+++.|+.-.. .-|+..+.... ... -.+..+|+..|.+...-++-.+||.+|=+|
T Consensus 12 ~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~-~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~ 90 (159)
T 2hr2_A 12 YLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHA-GFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRR 90 (159)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHH-HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhc-cchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc
Confidence 45778899999999999987444 24444443100 000 013349999999988888999999998544
Q ss_pred -----CCcchH----HHHHHHHHcCCChHHHHHHHHHHHh
Q psy1645 76 -----DDPSAY----MDVVETSHATESWEDLVRYLQMARK 106 (143)
Q Consensus 76 -----~dps~y----~eVie~a~~~~~~e~Lv~yL~MaRk 106 (143)
+++..+ ...=.+-..-|.|++=+..+..|=+
T Consensus 91 ~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAle 130 (159)
T 2hr2_A 91 GELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVE 130 (159)
T ss_dssp CCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHh
Confidence 444444 4444555668888888888776654
No 167
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=69.45 E-value=39 Score=27.77 Aligned_cols=90 Identities=8% Similarity=0.001 Sum_probs=67.1
Q ss_pred HhcchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CC---------------cchHHHHHHHHHcCCChHHHHHHHHHH
Q psy1645 45 RCNEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DD---------------PSAYMDVVETSHATESWEDLVRYLQMA 104 (143)
Q Consensus 45 k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~d---------------ps~y~eVie~a~~~~~~e~Lv~yL~Ma 104 (143)
+.+....|...|......+...+|++.|-+| ++ ...|..+-....+.|+|++-+.++..|
T Consensus 264 ~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~a 343 (457)
T 1kt0_A 264 KLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKA 343 (457)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 3455677888899888889999999999865 44 356667777777899999999999988
Q ss_pred Hhhh-hhhhHHHHHHHHHHhcCChhhHHHHh
Q psy1645 105 RKKA-RESYIESELIYAYARTNRLADLEEFI 134 (143)
Q Consensus 105 Rk~~-ke~~idt~Li~ayAk~~~l~ele~fl 134 (143)
-+.- ..+..=..+..+|.++|+..+-...+
T Consensus 344 l~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~ 374 (457)
T 1kt0_A 344 LGLDSANEKGLYRRGEAQLLMNEFESAKGDF 374 (457)
T ss_dssp HHHSTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HhcCCccHHHHHHHHHHHHHccCHHHHHHHH
Confidence 7652 34455556778888999886644443
No 168
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=68.75 E-value=15 Score=21.55 Aligned_cols=61 Identities=20% Similarity=0.312 Sum_probs=44.2
Q ss_pred chHHHHHHHHHHHhhCCCHHHHHHH-HHHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhC
Q psy1645 6 EPATHNALAKIYIDSNNNPERFLKF-FLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKA 75 (143)
Q Consensus 6 ~~~~~nalakIyi~~~~~~E~fl~~-~Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA 75 (143)
.+..+..+|.+|...++..++.-.. ..++. .-+.+.+|..+|......+...+|++.|-++
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~---------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a 69 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALEL---------DPNNAEAWYNLGNAYYKQGDYDEAIEYYQKA 69 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhc---------CCCCHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 4567889999999999988876222 12221 1245788999999888888888888887654
No 169
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=67.53 E-value=21 Score=26.71 Aligned_cols=93 Identities=18% Similarity=0.071 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHhhCCCHHHHHHHHHHHhccchhHHHH-----HhcchhHHHHHHHHhhhhhhhHHHHHHHHhC-------
Q psy1645 8 ATHNALAKIYIDSNNNPERFLKFFLVDHLSKTPFYVL-----RCNEPGVWSQLAKAQLQKGLVKESIDSFIKA------- 75 (143)
Q Consensus 8 ~~~nalakIyi~~~~~~E~fl~~~Li~~~~~narYa~-----k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA------- 75 (143)
.+++.+|.+|...+++.++. .++- ++.+.+. ......+|..+|......+.-.+|++.|-+|
T Consensus 156 ~~~~~lg~~y~~~g~~~~A~--~~~~----~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~ 229 (293)
T 3u3w_A 156 YIENAIANIYAENGYLKKGI--DLFE----QILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRI 229 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHH--HHHH----HHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHH--HHHH----HHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHc
Confidence 46999999999999988877 3211 1111222 2233446666777777767677777665443
Q ss_pred CC----cchHHHHHHHHHcCC-ChHHHHHHHHHHHh
Q psy1645 76 DD----PSAYMDVVETSHATE-SWEDLVRYLQMARK 106 (143)
Q Consensus 76 ~d----ps~y~eVie~a~~~~-~~e~Lv~yL~MaRk 106 (143)
++ +..|..+=....+.| .|++=+.|++.|-+
T Consensus 230 ~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~ 265 (293)
T 3u3w_A 230 NSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASF 265 (293)
T ss_dssp TBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHH
Confidence 22 223333334444566 35777777665554
No 170
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=66.66 E-value=31 Score=27.10 Aligned_cols=92 Identities=5% Similarity=0.013 Sum_probs=67.0
Q ss_pred HHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhCC--Ccc--------------------hHHHHHHHHHcCCChHHHHHH
Q psy1645 43 VLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKAD--DPS--------------------AYMDVVETSHATESWEDLVRY 100 (143)
Q Consensus 43 a~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA~--dps--------------------~y~eVie~a~~~~~~e~Lv~y 100 (143)
..+.+....|..+|......+...+|+..|-+|= +|. .|..+-....+.|.|++-+.+
T Consensus 173 ~~~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~ 252 (338)
T 2if4_A 173 EERIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGH 252 (338)
T ss_dssp HHHHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 4455566778888888888888899999887742 333 455555666679999999999
Q ss_pred HHHHHhhh-hhhhHHHHHHHHHHhcCChhhHHHHh
Q psy1645 101 LQMARKKA-RESYIESELIYAYARTNRLADLEEFI 134 (143)
Q Consensus 101 L~MaRk~~-ke~~idt~Li~ayAk~~~l~ele~fl 134 (143)
+..+-+.- ..+..=..+..+|.+.|+..+-...+
T Consensus 253 ~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l 287 (338)
T 2if4_A 253 CNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDF 287 (338)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHH
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 99887653 34455566778899999987755544
No 171
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=65.20 E-value=53 Score=26.50 Aligned_cols=60 Identities=10% Similarity=-0.007 Sum_probs=28.9
Q ss_pred hcchhHHHHHHHHhhh----hhhhHHHHHHHHhC---CCcchHHHHHHHHHc----CCChHHHHHHHHHHH
Q psy1645 46 CNEPGVWSQLAKAQLQ----KGLVKESIDSFIKA---DDPSAYMDVVETSHA----TESWEDLVRYLQMAR 105 (143)
Q Consensus 46 ~~~~~vWs~l~raqL~----~~~V~eAI~sFIkA---~dps~y~eVie~a~~----~~~~e~Lv~yL~MaR 105 (143)
.+++..|..+|..... .+...+|++.|-++ ++|..+..+-..-.. .++++.-+.|+..+-
T Consensus 180 ~~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~y~~g~g~~~~~~~A~~~~~~a~ 250 (490)
T 2xm6_A 180 QGNVWSCNQLGYMYSRGLGVERNDAISAQWYRKSATSGDELGQLHLADMYYFGIGVTQDYTQSRVLFSQSA 250 (490)
T ss_dssp TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHH
Confidence 3556666666655554 34455666666543 333333333332222 445555555555443
No 172
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=64.98 E-value=7 Score=32.76 Aligned_cols=85 Identities=8% Similarity=-0.094 Sum_probs=63.8
Q ss_pred hHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcchHHHHHHHHHcCCChHHHHHHHHHHHhh-hhhhhHHHHHHHHHHh
Q psy1645 50 GVWSQLAKAQLQKGLVKESIDSFIKA-----DDPSAYMDVVETSHATESWEDLVRYLQMARKK-ARESYIESELIYAYAR 123 (143)
Q Consensus 50 ~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~-~ke~~idt~Li~ayAk 123 (143)
..|..+|......+...+|++.|-+| +++..+..+-....+.|+|++=+.+++.|-+. -..+..=..+..+|.+
T Consensus 7 ~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~ 86 (477)
T 1wao_1 7 EELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMA 86 (477)
T ss_dssp TTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 34555566666677788888888654 56777777888888899999999999988765 3445566678888999
Q ss_pred cCChhhHHHHh
Q psy1645 124 TNRLADLEEFI 134 (143)
Q Consensus 124 ~~~l~ele~fl 134 (143)
.|+..+-++.+
T Consensus 87 ~g~~~eA~~~~ 97 (477)
T 1wao_1 87 LGKFRAALRDY 97 (477)
T ss_dssp HTCHHHHHHHH
T ss_pred cCCHHHHHHHH
Confidence 99987765554
No 173
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=62.64 E-value=47 Score=25.02 Aligned_cols=60 Identities=17% Similarity=0.008 Sum_probs=30.2
Q ss_pred chHHHHHHHHHHHhhCCCHHHHHHH-HHHHhccchhHHHHHhcchh-HHHHHHHHhhhhhhhHHHHHHHHh
Q psy1645 6 EPATHNALAKIYIDSNNNPERFLKF-FLVDHLSKTPFYVLRCNEPG-VWSQLAKAQLQKGLVKESIDSFIK 74 (143)
Q Consensus 6 ~~~~~nalakIyi~~~~~~E~fl~~-~Li~~~~~narYa~k~~~~~-vWs~l~raqL~~~~V~eAI~sFIk 74 (143)
.+.+|..+|.++...++..++--.+ ..++.-+ ++++ +|..++......+.+.+|++.|-+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p---------~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 159 (308)
T 2ond_A 98 NMLLYFAYADYEESRMKYEKVHSIYNRLLAIED---------IDPTLVYIQYMKFARRAEGIKSGRMIFKK 159 (308)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSS---------SCTHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhcCCHHHHHHHHHHHHhccc---------cCccHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 4557777788877777655554222 1222111 1233 555555544444445555555544
No 174
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=61.05 E-value=37 Score=23.24 Aligned_cols=118 Identities=8% Similarity=0.054 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHhhCCCHHHHHHHHHHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhCC--Cc-chHHHH
Q psy1645 8 ATHNALAKIYIDSNNNPERFLKFFLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKAD--DP-SAYMDV 84 (143)
Q Consensus 8 ~~~nalakIyi~~~~~~E~fl~~~Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA~--dp-s~y~eV 84 (143)
......|.+|...++..++- ..+-+.+ ...-+.+..|..+|...+..|...+|++.|-++- +| ..+..+
T Consensus 7 ~~~~~~a~~~~~~g~~~~A~--~~~~~al------~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~ 78 (176)
T 2r5s_A 7 EQLLKQVSELLQQGEHAQAL--NVIQTLS------DELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQDNSYKSL 78 (176)
T ss_dssp TTHHHHHHHHHHTTCHHHHH--HHHHTSC------HHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGCCHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHH--HHHHHHH------HHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccCChHHHHH
Confidence 34567888999998887776 2111111 1234578899999999999999999999998763 22 123222
Q ss_pred HH---HHHcCCChHHHHHHHHHHHhh-hhhhhHHHHHHHHHHhcCChhhHHHHh
Q psy1645 85 VE---TSHATESWEDLVRYLQMARKK-ARESYIESELIYAYARTNRLADLEEFI 134 (143)
Q Consensus 85 ie---~a~~~~~~e~Lv~yL~MaRk~-~ke~~idt~Li~ayAk~~~l~ele~fl 134 (143)
.. ...+.+..+. +.+++.+-+. -..+..=..|..+|.+.|+..+=.+++
T Consensus 79 ~~~~~~~~~~~~~~a-~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~ 131 (176)
T 2r5s_A 79 IAKLELHQQAAESPE-LKRLEQELAANPDNFELACELAVQYNQVGRDEEALELL 131 (176)
T ss_dssp HHHHHHHHHHTSCHH-HHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHhhcccchH-HHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHH
Confidence 22 1222222222 4455444332 345666677888899999987755544
No 175
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=59.77 E-value=45 Score=25.73 Aligned_cols=69 Identities=9% Similarity=0.050 Sum_probs=52.1
Q ss_pred hhHHHHHHHHhCCCcchHHHH-HHHHHcCCChHHHHHHHHHHHhhhhh----hhHHHHHHHHHHhcCChhhHHHHhc
Q psy1645 64 LVKESIDSFIKADDPSAYMDV-VETSHATESWEDLVRYLQMARKKARE----SYIESELIYAYARTNRLADLEEFIS 135 (143)
Q Consensus 64 ~V~eAI~sFIkA~dps~y~eV-ie~a~~~~~~e~Lv~yL~MaRk~~ke----~~idt~Li~ayAk~~~l~ele~fl~ 135 (143)
-++.-|.+|++.+.-|+|.++ ++.....|+-+.|=+-+.- .+++ |.+=-.+..||.|.|...+-++.+.
T Consensus 76 NlKrVi~C~~~~n~~se~vd~ALd~lv~~~KkDqLdki~~~---~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~ 149 (172)
T 1wy6_A 76 NLKSVVECGVINNTLNEHVNKALDILVIQGKRDKLEEIGRE---ILKNNEVSASILVAIANALRRVGDERDATTLLI 149 (172)
T ss_dssp CTHHHHHHHHHTTCCCHHHHHHHHHHHHTTCHHHHHHHHHH---HC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cHHHHHHHHHHhcchHHHHHHHHHHHHHhccHhHHHHHHHH---HhccCCCChHHHHHHHHHHHHhcchhhHHHHHH
Confidence 458889999999999999876 6778889998888766652 1233 4555566779999999988877764
No 176
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=59.04 E-value=51 Score=25.71 Aligned_cols=21 Identities=19% Similarity=0.102 Sum_probs=18.3
Q ss_pred hHHHHHHHHHHHhhCCCHHHH
Q psy1645 7 PATHNALAKIYIDSNNNPERF 27 (143)
Q Consensus 7 ~~~~nalakIyi~~~~~~E~f 27 (143)
..+||.||.||-..|++.||.
T Consensus 51 a~~yn~Lg~~~~~~G~~~eAl 71 (472)
T 4g1t_A 51 ATMCNLLAYLKHLKGQNEAAL 71 (472)
T ss_dssp CHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHH
Confidence 357999999999999998885
No 177
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=58.87 E-value=60 Score=24.98 Aligned_cols=18 Identities=11% Similarity=0.171 Sum_probs=14.6
Q ss_pred HHHHHHHHHhhCCCHHHH
Q psy1645 10 HNALAKIYIDSNNNPERF 27 (143)
Q Consensus 10 ~nalakIyi~~~~~~E~f 27 (143)
...+|++|.+.++..++.
T Consensus 58 l~~l~~~y~~~~~~~~a~ 75 (434)
T 4b4t_Q 58 ILELGQLYVTMGAKDKLR 75 (434)
T ss_dssp HHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHCCCHHHHH
Confidence 467899999999987754
No 178
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=57.86 E-value=73 Score=25.67 Aligned_cols=17 Identities=6% Similarity=0.178 Sum_probs=7.7
Q ss_pred CCChHHHHHHHHHHHhh
Q psy1645 91 TESWEDLVRYLQMARKK 107 (143)
Q Consensus 91 ~~~~e~Lv~yL~MaRk~ 107 (143)
.++++.=+.|++.|.+.
T Consensus 416 ~~d~~~A~~~~~~A~~~ 432 (490)
T 2xm6_A 416 ERDYVQAWAWFDTASTN 432 (490)
T ss_dssp CCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHC
Confidence 34444444444444443
No 179
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=57.79 E-value=59 Score=24.62 Aligned_cols=75 Identities=13% Similarity=0.099 Sum_probs=47.1
Q ss_pred hhhhhhhHHHHHHHHhCCCcc---------hHHHHHHHHHcCCChHHHHHHHHHHHhhhhh-------hhHHHHHHHHHH
Q psy1645 59 QLQKGLVKESIDSFIKADDPS---------AYMDVVETSHATESWEDLVRYLQMARKKARE-------SYIESELIYAYA 122 (143)
Q Consensus 59 qL~~~~V~eAI~sFIkA~dps---------~y~eVie~a~~~~~~e~Lv~yL~MaRk~~ke-------~~idt~Li~ayA 122 (143)
.+..|...+|+..+-++-.+. .+..+-......|.+++-+.+|..+...... ..+-..+..+|.
T Consensus 225 ~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~~~~~~~~~~~~~la~~~~ 304 (373)
T 1hz4_A 225 WQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYW 304 (373)
T ss_dssp HHHTTCHHHHHHHHHHSCCCCCTTCGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHhCCCCCCCcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHH
Confidence 445677788888887765432 2344445566689999988888877654332 123344566677
Q ss_pred hcCChhhHHHH
Q psy1645 123 RTNRLADLEEF 133 (143)
Q Consensus 123 k~~~l~ele~f 133 (143)
+.|+..+-.+.
T Consensus 305 ~~g~~~~A~~~ 315 (373)
T 1hz4_A 305 QAGRKSDAQRV 315 (373)
T ss_dssp HHTCHHHHHHH
T ss_pred HhCCHHHHHHH
Confidence 78877654443
No 180
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=55.63 E-value=29 Score=27.78 Aligned_cols=53 Identities=28% Similarity=0.429 Sum_probs=37.7
Q ss_pred cchhHHHHHHHHhhhhhhhHHHHHHHHhCCCcchHHHHHHHHHcCCChHHHHHHHHHHHhh
Q psy1645 47 NEPGVWSQLAKAQLQKGLVKESIDSFIKADDPSAYMDVVETSHATESWEDLVRYLQMARKK 107 (143)
Q Consensus 47 ~~~~vWs~l~raqL~~~~V~eAI~sFIkA~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~ 107 (143)
.+|++|..+-... .+-+.++++.|++ .+.++.+.++ .|+++.|..++..+|+.
T Consensus 257 ~~p~~w~di~~~N--~~~~~~~l~~~~~-----~l~~l~~~l~-~~d~~~l~~~~~~a~~~ 309 (314)
T 3ggo_A 257 SDPIMWRDIFLEN--KENVMKAIEGFEK-----SLNHLKELIV-REAEEELVEYLKEVKIK 309 (314)
T ss_dssp SCHHHHHHHHHHT--HHHHHHHHHHHHH-----HHHHHHHHHH-HTCSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHC--HHHHHHHHHHHHH-----HHHHHHHHHH-cCCHHHHHHHHHHHHHH
Confidence 6999999986533 2356778888874 4555555554 47789999999988864
No 181
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=53.55 E-value=30 Score=25.73 Aligned_cols=57 Identities=23% Similarity=0.195 Sum_probs=43.1
Q ss_pred HHHHHHHHHHhhCCCHHHHHHHHHHHhccchhHHHHHh---------cchhHH----HHHHHHhhhhhhhHHHHHHHHhC
Q psy1645 9 THNALAKIYIDSNNNPERFLKFFLVDHLSKTPFYVLRC---------NEPGVW----SQLAKAQLQKGLVKESIDSFIKA 75 (143)
Q Consensus 9 ~~nalakIyi~~~~~~E~fl~~~Li~~~~~narYa~k~---------~~~~vW----s~l~raqL~~~~V~eAI~sFIkA 75 (143)
.|.-+|.++...+++.|+--- ++.|.+. +.+..| ...|.+...-++..+||.+|=+|
T Consensus 59 a~~n~g~al~~Lgr~~eAl~~----------~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kA 128 (159)
T 2hr2_A 59 CHAGLAEALAGLRSFDEALHS----------ADKALHYFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKV 128 (159)
T ss_dssp HHHHHHHHHHHTTCHHHHHHH----------HHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHH----------HHHHHHhhhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHH
Confidence 788888888888888777622 3333333 567789 88899888888999999998665
No 182
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=53.28 E-value=24 Score=27.24 Aligned_cols=27 Identities=4% Similarity=0.108 Sum_probs=19.0
Q ss_pred HHHHHHHHHcCCChHHHHHHHHHHHhh
Q psy1645 81 YMDVVETSHATESWEDLVRYLQMARKK 107 (143)
Q Consensus 81 y~eVie~a~~~~~~e~Lv~yL~MaRk~ 107 (143)
+..+.......|+|++++.+++.+++.
T Consensus 58 l~~l~~~y~~~~~~~~a~~~~~~~~~~ 84 (434)
T 4b4t_Q 58 ILELGQLYVTMGAKDKLREFIPHSTEY 84 (434)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 556666667777777777777777653
No 183
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=49.08 E-value=82 Score=23.64 Aligned_cols=61 Identities=11% Similarity=0.132 Sum_probs=46.4
Q ss_pred cchhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcc-hHHHHHHHHHcCCChHHHHHHHHHHHhh
Q psy1645 47 NEPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPS-AYMDVVETSHATESWEDLVRYLQMARKK 107 (143)
Q Consensus 47 ~~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps-~y~eVie~a~~~~~~e~Lv~yL~MaRk~ 107 (143)
+.+.+|..++......+...+|++.|=++ ++|. .+........+.|.+++-+..++.|.+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~ 163 (308)
T 2ond_A 97 KNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKARED 163 (308)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTS
T ss_pred ccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 45679999999888888888888888763 3454 5777777777788888888777777654
No 184
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=45.85 E-value=95 Score=23.45 Aligned_cols=51 Identities=8% Similarity=-0.070 Sum_probs=28.6
Q ss_pred HHHHHHcCCChHHHHHHHHHHHhhhhhh------hHHHHHHHHHHhcCChhhHHHHh
Q psy1645 84 VVETSHATESWEDLVRYLQMARKKARES------YIESELIYAYARTNRLADLEEFI 134 (143)
Q Consensus 84 Vie~a~~~~~~e~Lv~yL~MaRk~~ke~------~idt~Li~ayAk~~~l~ele~fl 134 (143)
+-......|.|++=..++..+.+..++. ..=..|...|...|+..+-.+++
T Consensus 141 la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l 197 (373)
T 1hz4_A 141 RAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNARSQL 197 (373)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 3344456788888877777766544321 11223444566677766554443
No 185
>1wwp_A Hypothetical protein TTHA0636; structural genomics, unknown function, riken structural genomics/proteomics initiative, RSGI; 2.11A {Thermus thermophilus HB8}
Probab=45.44 E-value=69 Score=22.12 Aligned_cols=69 Identities=9% Similarity=0.058 Sum_probs=48.7
Q ss_pred HHHHHHHH---hCCCcchHHHHHHHHHcCCChHHHH--HHHHHHH--hh-h-hhhhHHHHHHHHHHhcCChhhHHHHhc
Q psy1645 66 KESIDSFI---KADDPSAYMDVVETSHATESWEDLV--RYLQMAR--KK-A-RESYIESELIYAYARTNRLADLEEFIS 135 (143)
Q Consensus 66 ~eAI~sFI---kA~dps~y~eVie~a~~~~~~e~Lv--~yL~MaR--k~-~-ke~~idt~Li~ayAk~~~l~ele~fl~ 135 (143)
=+..+-|+ +.-.|..+.+++..+.+.|--++=- .|+.|++ .. + .=..++-+.+|.-.+. -+.++++|+.
T Consensus 38 wk~~k~~l~~~~g~~~~s~rd~~r~a~~~glI~~~~~~~w~~m~~~RN~~vH~Y~~~~~~~v~~~i~~-~l~~~~~l~~ 115 (119)
T 1wwp_A 38 WKALQAYLREKEGLEGASPKGVIRLAREVGLLRDEEARLALGMVDDRSLTVHTYNEPLARAIFRRLPD-YARLMEQVLG 115 (119)
T ss_dssp HHHHHHHHHHHHCCCCCSHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHGGGTTSHHHHHHHHHHHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCCCCHHHHHHHHHHcCCCCchHHHHHHHHHHHhhHhcccccHhhHHHHHHHHHH-HHHHHHHHHH
Confidence 33444444 3334999999999999999765444 7888865 22 2 2345788888888776 8888988874
No 186
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=44.98 E-value=1.1e+02 Score=23.82 Aligned_cols=94 Identities=12% Similarity=0.094 Sum_probs=53.7
Q ss_pred cchHHHHHHHHHHHhhCCCHHHHHHH-HHHHhccchhHHHHHhcchhHHHHHHHHh-------------------hhhhh
Q psy1645 5 TEPATHNALAKIYIDSNNNPERFLKF-FLVDHLSKTPFYVLRCNEPGVWSQLAKAQ-------------------LQKGL 64 (143)
Q Consensus 5 ~~~~~~nalakIyi~~~~~~E~fl~~-~Li~~~~~narYa~k~~~~~vWs~l~raq-------------------L~~~~ 64 (143)
..+.+++.+|.+|...++..++.-.. ..++..+ +.+.+|..+|... -..+.
T Consensus 245 ~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p---------~~~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~~ 315 (472)
T 4g1t_A 245 GVTDVLRSAAKFYRRKDEPDKAIELLKKALEYIP---------NNAYLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLEL 315 (472)
T ss_dssp SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST---------TCHHHHHHHHHHHHHHHHHHHHC------CHHHHHHH
T ss_pred cHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCC---------ChHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhh
Confidence 45567778888888888877776222 1222222 2333444443211 11123
Q ss_pred hHHHHHHHHh-----CCCcchHHHHHHHHHcCCChHHHHHHHHHHHhh
Q psy1645 65 VKESIDSFIK-----ADDPSAYMDVVETSHATESWEDLVRYLQMARKK 107 (143)
Q Consensus 65 V~eAI~sFIk-----A~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~ 107 (143)
...|+..|-+ .+++..+..+-..-.+.|+|++=+.+++.+=+.
T Consensus 316 ~~~A~~~~~~a~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~ 363 (472)
T 4g1t_A 316 IGHAVAHLKKADEANDNLFRVCSILASLHALADQYEEAEYYFQKEFSK 363 (472)
T ss_dssp HHHHHHHHHHHHHHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhhcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhc
Confidence 4566666644 355566666666777788888888877766544
No 187
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=41.59 E-value=70 Score=20.72 Aligned_cols=62 Identities=6% Similarity=-0.012 Sum_probs=38.9
Q ss_pred cchhHHHHHHHHhhh--hh-hhHHHHHHHHh-----CCCcchHHHHHHHHHcCCChHHHHHHHHHHHhhh
Q psy1645 47 NEPGVWSQLAKAQLQ--KG-LVKESIDSFIK-----ADDPSAYMDVVETSHATESWEDLVRYLQMARKKA 108 (143)
Q Consensus 47 ~~~~vWs~l~raqL~--~~-~V~eAI~sFIk-----A~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~ 108 (143)
++|++|..+|.+..- ++ +..+|...|-+ -++|..+.-+=..+.+.|.|++=|.+++.+=+..
T Consensus 4 ~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~ 73 (93)
T 3bee_A 4 VTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSN 73 (93)
T ss_dssp CCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Confidence 568888888877642 22 23444444433 3444444455566777999999999888765543
No 188
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=37.87 E-value=1.3e+02 Score=24.34 Aligned_cols=61 Identities=5% Similarity=-0.057 Sum_probs=28.9
Q ss_pred chhHHHHHHHHhhhhhhhHHHHHHHHhC-----CCcc----hHHHHHHHHHcCCChHHHHHHHHHHHhhh
Q psy1645 48 EPGVWSQLAKAQLQKGLVKESIDSFIKA-----DDPS----AYMDVVETSHATESWEDLVRYLQMARKKA 108 (143)
Q Consensus 48 ~~~vWs~l~raqL~~~~V~eAI~sFIkA-----~dps----~y~eVie~a~~~~~~e~Lv~yL~MaRk~~ 108 (143)
.+.+|..++.-....|.+..|...|=+| .+|+ -+...++--.+.|..++..++...+++..
T Consensus 424 ~~~~~~~~~~~~~~~g~~~~Ar~~~~~al~~~~~~~~~~~~lw~~~~~~e~~~G~~~~~~~~~~r~~~~~ 493 (530)
T 2ooe_A 424 IPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGDLASILKVEKRRFTAF 493 (530)
T ss_dssp CHHHHHHHHHHHTTTTCHHHHHHHHHHHHHSCCSCGGGCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHhCCCHhhHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 4555555555444444444444444333 1333 23333444444555555555555555443
No 189
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=37.53 E-value=1.1e+02 Score=21.77 Aligned_cols=60 Identities=7% Similarity=-0.105 Sum_probs=42.4
Q ss_pred hhHHHHHHHHhhh----hhhhHHHHHHHHhC----CCcchHHHHHHHHHcC-C-----ChHHHHHHHHHHHhhh
Q psy1645 49 PGVWSQLAKAQLQ----KGLVKESIDSFIKA----DDPSAYMDVVETSHAT-E-----SWEDLVRYLQMARKKA 108 (143)
Q Consensus 49 ~~vWs~l~raqL~----~~~V~eAI~sFIkA----~dps~y~eVie~a~~~-~-----~~e~Lv~yL~MaRk~~ 108 (143)
+.-|..||..... .+....|++.|-+| ++|..+..+=..-.+- | +++.=+.|++.|-+..
T Consensus 125 ~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g 198 (212)
T 3rjv_A 125 VDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSLSRTGYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEG 198 (212)
T ss_dssp HHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHTSCTTHHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcC
Confidence 6788888888877 45679999999998 6666655544433321 2 7888888888776653
No 190
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=36.48 E-value=1.7e+02 Score=23.71 Aligned_cols=116 Identities=14% Similarity=0.008 Sum_probs=64.8
Q ss_pred chHHHHHHHHHHHhhCCCHHHHHHH-HHHHhccchhHHHHHhcch-hHHHHHHHHhhhhhhhHHHHHHHHhCC--Ccch-
Q psy1645 6 EPATHNALAKIYIDSNNNPERFLKF-FLVDHLSKTPFYVLRCNEP-GVWSQLAKAQLQKGLVKESIDSFIKAD--DPSA- 80 (143)
Q Consensus 6 ~~~~~nalakIyi~~~~~~E~fl~~-~Li~~~~~narYa~k~~~~-~vWs~l~raqL~~~~V~eAI~sFIkA~--dps~- 80 (143)
.+.++..+|.++...++..++--.. ..++.-+. ++ .+|...++.....+...+|++.|-+|- .|..
T Consensus 320 ~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~---------~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~ 390 (530)
T 2ooe_A 320 NMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDI---------DPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRH 390 (530)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSS---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCT
T ss_pred cHHHHHHHHHHHHhcCCHHHHHHHHHHHhCcccc---------CchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCch
Confidence 4677788888888877766654222 13332211 22 489888877666677888888887762 2322
Q ss_pred --HHHHHHHH-HcCCChHHHHHHHHHHHhhh-hhhhHHHHHHHHHHhcCChhhH
Q psy1645 81 --YMDVVETS-HATESWEDLVRYLQMARKKA-RESYIESELIYAYARTNRLADL 130 (143)
Q Consensus 81 --y~eVie~a-~~~~~~e~Lv~yL~MaRk~~-ke~~idt~Li~ayAk~~~l~el 130 (143)
|....-.. ...|+++.-.+++..+=+.. ..+.+=..++-.+.+.|+..+.
T Consensus 391 ~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~~g~~~~A 444 (530)
T 2ooe_A 391 HVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNT 444 (530)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCHHHH
T ss_pred HHHHHHHHHHHHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHhCCCHhhH
Confidence 22211111 24678877777777665432 2233333333344456665543
No 191
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=31.14 E-value=87 Score=18.69 Aligned_cols=52 Identities=13% Similarity=0.217 Sum_probs=28.2
Q ss_pred HHHhhhhhhhHHHHHHHHhC-----CCcc-hHHHHHHHHHcCCChHHHHHHHHHHHhh
Q psy1645 56 AKAQLQKGLVKESIDSFIKA-----DDPS-AYMDVVETSHATESWEDLVRYLQMARKK 107 (143)
Q Consensus 56 ~raqL~~~~V~eAI~sFIkA-----~dps-~y~eVie~a~~~~~~e~Lv~yL~MaRk~ 107 (143)
|...+..+...+|++.|-++ +++. .+..+-......|+|++=+.+++.+-+.
T Consensus 7 a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~ 64 (99)
T 2kc7_A 7 IKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIEL 64 (99)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 34444445556666666433 3334 4444444445567777777777665543
No 192
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=30.14 E-value=1.4e+02 Score=23.20 Aligned_cols=65 Identities=9% Similarity=0.171 Sum_probs=36.5
Q ss_pred cchhHHHHHHHHhhhhhhhHHHHHHHHhCCCcchHHHHHHHHHcCCChHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q psy1645 47 NEPGVWSQLAKAQLQKGLVKESIDSFIKADDPSAYMDVVETSHATESWEDLVRYLQMARKKARESYIESELIYAY 121 (143)
Q Consensus 47 ~~~~vWs~l~raqL~~~~V~eAI~sFIkA~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~ke~~idt~Li~ay 121 (143)
.+|++|..+-... .+.+. +++.|.+ .+.++.+.. +.|+++.|..++..+|+ .+..+.+..+..+.
T Consensus 222 ~~p~~~~di~~sn--~~~~~-~l~~~~~-----~l~~~~~~l-~~~d~~~l~~~~~~a~~-~~~~~~~~~~~~~~ 286 (298)
T 2pv7_A 222 QDAELYADIIMDK--SENLA-VIETLKQ-----TYDEALTFF-ENNDRQGFIDAFHKVRD-WFGDYSEQFLKESR 286 (298)
T ss_dssp SCHHHHHHHHC------CHH-HHHHHHH-----HHHHHHHHH-HTTCHHHHHHHHHHHHH-HHTTHHHHHHHHHH
T ss_pred CCHHHHHHHHHHC--HHHHH-HHHHHHH-----HHHHHHHHH-HcCCHHHHHHHHHHHHH-HHhhcchHHHHHHH
Confidence 4788888763221 22334 6666664 233333333 36778888898888887 44445554444443
No 193
>3tmk_A Thymidylate kinase; phosphotransferase; HET: T5A; 2.00A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 2tmk_A* 1tmk_A*
Probab=30.07 E-value=81 Score=24.06 Aligned_cols=61 Identities=15% Similarity=0.244 Sum_probs=41.1
Q ss_pred hhHHHHHHHHhCCC--cchH-HHHHHHHHcCCChHHHHHHHHHHHhhhhhhhHHHHHHHHHHhc
Q psy1645 64 LVKESIDSFIKADD--PSAY-MDVVETSHATESWEDLVRYLQMARKKARESYIESELIYAYART 124 (143)
Q Consensus 64 ~V~eAI~sFIkA~d--ps~y-~eVie~a~~~~~~e~Lv~yL~MaRk~~ke~~idt~Li~ayAk~ 124 (143)
.+.+.|+.|+.... .+.+ ..++-.|.+...-+.+.+.|....--+-|.++|+.++|..++.
T Consensus 44 ~~g~~ir~~l~~~~~~~~~~~~~llf~a~R~~~~~~I~paL~~g~~VI~DRy~~S~~ayq~~~~ 107 (216)
T 3tmk_A 44 RIGGLINEYLTDDSFQLSDQAIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKG 107 (216)
T ss_dssp HHHHHHHHHHHCTTSCCCHHHHHHHHHHHHHTTHHHHHHHHHTTCEEEEESCHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCEEEEeccHhHHHHHHHhcC
Confidence 45677888887643 2223 4567777777665666677753322356999999999998764
No 194
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=28.81 E-value=1.8e+02 Score=28.49 Aligned_cols=73 Identities=11% Similarity=0.097 Sum_probs=51.8
Q ss_pred hhhhHHHHHHH--Hh-------CCCcchHHHHHHHHHcCCChHHHHHHHHHHHhhhhhhhHH--HHHHHHHHhcCCh-hh
Q psy1645 62 KGLVKESIDSF--IK-------ADDPSAYMDVVETSHATESWEDLVRYLQMARKKARESYIE--SELIYAYARTNRL-AD 129 (143)
Q Consensus 62 ~~~V~eAI~sF--Ik-------A~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~ke~~id--t~Li~ayAk~~~l-~e 129 (143)
.|.+.+|.+-| |+ .-|.-.|.-+|...-++|+.++-.+.+.+-++..-.|.+- +.||.||+|.|+. .+
T Consensus 140 ~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYntLI~glcK~G~~~e~ 219 (1134)
T 3spa_A 140 TDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAAALQCMGRQDQDAGT 219 (1134)
T ss_dssp HTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTCCHHH
T ss_pred CCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHhCCCcHHH
Confidence 45667777776 22 1266678888888888999999888888777766555554 5889999999885 44
Q ss_pred HHHHh
Q psy1645 130 LEEFI 134 (143)
Q Consensus 130 le~fl 134 (143)
..+++
T Consensus 220 A~~Ll 224 (1134)
T 3spa_A 220 IERCL 224 (1134)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 195
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=27.78 E-value=75 Score=26.05 Aligned_cols=52 Identities=13% Similarity=0.284 Sum_probs=33.6
Q ss_pred hcchhHHHHHHHHhhhhhhhHHHHHHHHhCCCcchHHHHHHHHHcCCChHHHHHHHHHHHh
Q psy1645 46 CNEPGVWSQLAKAQLQKGLVKESIDSFIKADDPSAYMDVVETSHATESWEDLVRYLQMARK 106 (143)
Q Consensus 46 ~~~~~vWs~l~raqL~~~~V~eAI~sFIkA~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk 106 (143)
-.+|++|..+-... .+-+.++|+.|+ ..+.++.+.++. +. +.|.+++..+|+
T Consensus 235 ~s~p~lw~di~~~N--~~~~~~~l~~~~-----~~L~~l~~~l~~-~d-~~l~~~~~~~~~ 286 (341)
T 3ktd_A 235 GTDPGLVRAMCESN--AGPLVKALDEAL-----AILHEAREGLTA-EQ-PNIEQLADNGYR 286 (341)
T ss_dssp GSCHHHHHHHHHHT--HHHHHHHHHHHH-----HHHHHHHHHHTS-SS-CCCHHHHHHHHH
T ss_pred cCCHHHHHHHHHhC--HHHHHHHHHHHH-----HHHHHHHHHHHc-cc-HHHHHHHHHHHH
Confidence 46999999875432 335667777777 345555555554 34 677777776664
No 196
>3qks_A DNA double-strand break repair RAD50 ATPase; RECA-like fold, coiled-coils, ATPase, exonuclease, endonucle binding, DNA binding; HET: DNA; 2.10A {Pyrococcus furiosus} PDB: 3qkr_A*
Probab=27.55 E-value=74 Score=23.47 Aligned_cols=55 Identities=18% Similarity=0.326 Sum_probs=41.8
Q ss_pred HHHHHHHhCCCcchHHHHHHHHHcCCChHHHHHHHHHHHhhhhhhhHHHHHHHHHHhcCChhhHHHHhcCcC
Q psy1645 67 ESIDSFIKADDPSAYMDVVETSHATESWEDLVRYLQMARKKARESYIESELIYAYARTNRLADLEEFISGEG 138 (143)
Q Consensus 67 eAI~sFIkA~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~~ke~~idt~Li~ayAk~~~l~ele~fl~~~N 138 (143)
.-+..|++++ .+..++++.+...+.|+.+..-|...++..+. ++.++|+++.++.
T Consensus 141 g~~~~~l~~~--~er~~~l~~i~g~~~~~~~~~~l~~~~~~~~~---------------~~~~l~~~~~~~~ 195 (203)
T 3qks_A 141 GQIDAILESD--EAREKVVREVLNLDKFETAYKKLSELKKTINN---------------RIKEYRDILARTE 195 (203)
T ss_dssp THHHHHHHCH--HHHHHHHHHHTCCCTTHHHHHHHHHHHHHHHH---------------HHHHHHHHHHTTC
T ss_pred CcHHHHHhCc--HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHhhcc
Confidence 3467899986 89999999999999999998888766655332 3456677766654
No 197
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=26.64 E-value=2e+02 Score=21.56 Aligned_cols=58 Identities=24% Similarity=0.343 Sum_probs=35.8
Q ss_pred hHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhCCCcchHHHHHHHHHcCCChHHHHHHHHHHHhh
Q psy1645 40 PFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKADDPSAYMDVVETSHATESWEDLVRYLQMARKK 107 (143)
Q Consensus 40 arYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA~dps~y~eVie~a~~~~~~e~Lv~yL~MaRk~ 107 (143)
.|.+. .+|++|...-.. ..+.+..+++.|.+ .+..+. .+-+.|+++.|..+|..+|+.
T Consensus 220 ~r~~~--~~p~~~~~~~~s--n~~~~~~~l~~~~~-----~l~~~~-~~i~~~d~~~l~~~~~~~~~~ 277 (281)
T 2g5c_A 220 TRIAK--SDPIMWRDIFLE--NKENVMKAIEGFEK-----SLNHLK-ELIVREAEEELVEYLKEVKIK 277 (281)
T ss_dssp ---CC--SCHHHHHHHHHH--THHHHHHHHHHHHH-----HHHHHH-HHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHhc--CCHHHHHHHHHH--CHHHHHHHHHHHHH-----HHHHHH-HHHHcCCHHHHHHHHHHHHHH
Confidence 44554 689999886432 23456677777774 222222 233468899999999888764
No 198
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=26.62 E-value=1.7e+02 Score=20.65 Aligned_cols=48 Identities=13% Similarity=0.116 Sum_probs=32.1
Q ss_pred HHcCCChHHHHHHHHHHHhhhhh-h---hHHHHHHHHHHhcCChhhHHHHhc
Q psy1645 88 SHATESWEDLVRYLQMARKKARE-S---YIESELIYAYARTNRLADLEEFIS 135 (143)
Q Consensus 88 a~~~~~~e~Lv~yL~MaRk~~ke-~---~idt~Li~ayAk~~~l~ele~fl~ 135 (143)
-.+.|+|++=+..++-+-+.-.+ | ..=.-+..+|.++|+..+-.+++.
T Consensus 157 ~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~A~~~~~ 208 (225)
T 2yhc_A 157 YTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEKVAK 208 (225)
T ss_dssp HHHHTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHcCcHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCCcHHHHHHHH
Confidence 34578888888877766554322 2 234456788999999887666654
No 199
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=26.36 E-value=1.1e+02 Score=22.56 Aligned_cols=29 Identities=10% Similarity=-0.048 Sum_probs=22.0
Q ss_pred cchhHHHHHHHHhhhhh-----------hhHHHHHHHHhC
Q psy1645 47 NEPGVWSQLAKAQLQKG-----------LVKESIDSFIKA 75 (143)
Q Consensus 47 ~~~~vWs~l~raqL~~~-----------~V~eAI~sFIkA 75 (143)
+.++.|..+|.+....+ ...+||++|-+|
T Consensus 78 ~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kA 117 (158)
T 1zu2_A 78 KKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQA 117 (158)
T ss_dssp TCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHH
Confidence 36788889998887653 678888877765
No 200
>1x87_A Urocanase protein; structural genomics, protein STR initiative, MCSG, PSI, midwest center for structural genomi; HET: MSE NAD; 2.40A {Geobacillus stearothermophilus} SCOP: e.51.1.1
Probab=25.20 E-value=61 Score=29.27 Aligned_cols=34 Identities=24% Similarity=0.334 Sum_probs=25.4
Q ss_pred CCCcchHHHHHHHHHc-CCChHHHHHHHHHHHhhh
Q psy1645 75 ADDPSAYMDVVETSHA-TESWEDLVRYLQMARKKA 108 (143)
Q Consensus 75 A~dps~y~eVie~a~~-~~~~e~Lv~yL~MaRk~~ 108 (143)
++||+++...=+++.+ -..+++|++|+.||||..
T Consensus 362 SGdpeDi~~TD~~~~el~~~~~~~~~WI~~A~e~~ 396 (551)
T 1x87_A 362 SGDPEDIYKTDEVILREFSDNERLCHWIRMAQKRI 396 (551)
T ss_dssp TCCHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHhcccchHHHHHHHHHhhcC
Confidence 6788877655544443 556899999999999864
No 201
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=25.07 E-value=1.1e+02 Score=28.68 Aligned_cols=75 Identities=8% Similarity=0.154 Sum_probs=55.1
Q ss_pred HHHHhhhhhhhHHHHHHHHhCC----------------------------CcchHHHHHHHHHcCCChHHHHHHHHHHHh
Q psy1645 55 LAKAQLQKGLVKESIDSFIKAD----------------------------DPSAYMDVVETSHATESWEDLVRYLQMARK 106 (143)
Q Consensus 55 l~raqL~~~~V~eAI~sFIkA~----------------------------dps~y~eVie~a~~~~~~e~Lv~yL~MaRk 106 (143)
+|+..|.-+...+|.+.|.||. .|..|..|+...++.|.|+..+.|-+.|=+
T Consensus 848 ~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lAi~ 927 (1139)
T 4fhn_B 848 KALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADA 927 (1139)
T ss_dssp HHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 5999999999999999998884 235688999999999999999999887754
Q ss_pred hh--hhhhHHHHH----HHHHHhcCChhh
Q psy1645 107 KA--RESYIESEL----IYAYARTNRLAD 129 (143)
Q Consensus 107 ~~--ke~~idt~L----i~ayAk~~~l~e 129 (143)
.. .++.+.++| .-+.-.+|+..+
T Consensus 928 ~~~~~~~~~~~~l~~~iFk~~L~l~~ye~ 956 (1139)
T 4fhn_B 928 SKETDDEDLSIAITHETLKTACAAGKFDA 956 (1139)
T ss_dssp HCCSCCHHHHHHHHHHHHHHHHHHCCSGG
T ss_pred hccCCChhhHHHHHHHHHHHHHhhCCHHH
Confidence 43 333334433 344555666543
No 202
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=24.78 E-value=2.2e+02 Score=21.25 Aligned_cols=120 Identities=10% Similarity=0.067 Sum_probs=72.8
Q ss_pred chHHHHHHHHHHHhhCCCHHHHHHH-HHHHhccchhHHHHHhcchhHHHHHHHHhhhhhhhHHHHHHHHhCC--CcchHH
Q psy1645 6 EPATHNALAKIYIDSNNNPERFLKF-FLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKAD--DPSAYM 82 (143)
Q Consensus 6 ~~~~~nalakIyi~~~~~~E~fl~~-~Li~~~~~narYa~k~~~~~vWs~l~raqL~~~~V~eAI~sFIkA~--dps~y~ 82 (143)
++..+-.+|..+...+...++.-.. -.++ ..-+.++.|..+|+..+..|...+|+..|-++- +|+...
T Consensus 116 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~---------~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~ 186 (287)
T 3qou_A 116 EEELXAQQAMQLMQESNYTDALPLLXDAWQ---------LSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRY 186 (287)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH---------HTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHH
T ss_pred chhhHHHHHHHHHhCCCHHHHHHHHHHHHH---------hCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHH
Confidence 3455667777777777776665111 1111 223467788889999999999999999998873 354333
Q ss_pred HHHHHH---HcCCChHHHHHHHHHH-HhhhhhhhHHHHHHHHHHhcCChhhHHHHh
Q psy1645 83 DVVETS---HATESWEDLVRYLQMA-RKKARESYIESELIYAYARTNRLADLEEFI 134 (143)
Q Consensus 83 eVie~a---~~~~~~e~Lv~yL~Ma-Rk~~ke~~idt~Li~ayAk~~~l~ele~fl 134 (143)
..+... .+.+.+++=+..|+.+ +..-..+.+=..|..+|.+.|+..+=.+.+
T Consensus 187 ~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l 242 (287)
T 3qou_A 187 QGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELL 242 (287)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHH
Confidence 322222 1233344334444433 333456667778888889999987655443
No 203
>1uwk_A Urocanate hydratase; hydrolase, urocanase, imidazolonepropionate, histidine metabolism, lyase; HET: NAD URO; 1.19A {Pseudomonas putida} SCOP: e.51.1.1 PDB: 1w1u_A* 1uwl_A* 2v7g_A*
Probab=24.73 E-value=63 Score=29.20 Aligned_cols=34 Identities=18% Similarity=0.250 Sum_probs=25.6
Q ss_pred CCCcchHHHHHHHHHc-CCChHHHHHHHHHHHhhh
Q psy1645 75 ADDPSAYMDVVETSHA-TESWEDLVRYLQMARKKA 108 (143)
Q Consensus 75 A~dps~y~eVie~a~~-~~~~e~Lv~yL~MaRk~~ 108 (143)
++||+++...=+++.+ -..+++|++|+.||||..
T Consensus 367 SGdpeDi~kTD~~~~el~~~~~~~~~WI~~A~e~~ 401 (557)
T 1uwk_A 367 SGEAEDIYKTDAKVKELIPDDAHLHRWLDMARERI 401 (557)
T ss_dssp TCCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHhcccchHHHHHHHHHhhcC
Confidence 6788877665544443 556899999999999864
No 204
>2fkn_A Urocanate hydratase; rossman fold, lyase; HET: NAD; 2.20A {Bacillus subtilis}
Probab=24.61 E-value=63 Score=29.17 Aligned_cols=34 Identities=21% Similarity=0.303 Sum_probs=25.5
Q ss_pred CCCcchHHHHHHHHHc-CCChHHHHHHHHHHHhhh
Q psy1645 75 ADDPSAYMDVVETSHA-TESWEDLVRYLQMARKKA 108 (143)
Q Consensus 75 A~dps~y~eVie~a~~-~~~~e~Lv~yL~MaRk~~ 108 (143)
++||+++...=+++.+ -..+++|++|+.||||..
T Consensus 363 SGdpeDi~kTD~~~~el~~~~~~~~~WI~~A~e~~ 397 (552)
T 2fkn_A 363 SGDPADIYRTDALLKELFPTNKALHRWIDMAQEKV 397 (552)
T ss_dssp TCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHhcccchHHHHHHHHHhhcC
Confidence 6788877665544443 556899999999999874
No 205
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=24.61 E-value=98 Score=22.85 Aligned_cols=64 Identities=14% Similarity=0.186 Sum_probs=38.7
Q ss_pred HHHHhcchhHHHHHHHHhhhhh----------hhHHHHHHHHhC-----CCcchHHHHHHHHHcC-----------CChH
Q psy1645 42 YVLRCNEPGVWSQLAKAQLQKG----------LVKESIDSFIKA-----DDPSAYMDVVETSHAT-----------ESWE 95 (143)
Q Consensus 42 Ya~k~~~~~vWs~l~raqL~~~----------~V~eAI~sFIkA-----~dps~y~eVie~a~~~-----------~~~e 95 (143)
+...=++++.|..+|...+.-+ ++.+||.+|=+| +++..|-.+=.+-... |.|+
T Consensus 29 i~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~ 108 (158)
T 1zu2_A 29 YKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFD 108 (158)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_pred HHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHhcccCcchhhhhccHH
Confidence 3444568889998887766543 367999999665 4444443333333222 4666
Q ss_pred HHHHHHHHHH
Q psy1645 96 DLVRYLQMAR 105 (143)
Q Consensus 96 ~Lv~yL~MaR 105 (143)
+=+.|++-|=
T Consensus 109 eA~~~~~kAl 118 (158)
T 1zu2_A 109 LATQFFQQAV 118 (158)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6676666554
Done!