Your job contains 1 sequence.
>psy1645
MLACTEPATHNALAKIYIDSNNNPERFLKFFLVDHLSKTPFYVLRCNEPGVWSQLAKAQL
QKGLVKESIDSFIKADDPSAYMDVVETSHATESWEDLVRYLQMARKKARESYIESELIYA
YARTNRLADLEEFISGEGFFEIL
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy1645
(143 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0000319 - symbol:Chc "Clathrin heavy chain" specie... 387 4.2e-45 2
UNIPROTKB|K7GQL8 - symbol:CLTC "Uncharacterized protein" ... 356 1.4e-42 2
UNIPROTKB|F6PV15 - symbol:CLTC "Uncharacterized protein" ... 356 1.4e-42 2
ZFIN|ZDB-GENE-030131-2299 - symbol:cltca "clathrin, heavy... 361 3.1e-42 2
UNIPROTKB|F1NW23 - symbol:CLTC "Uncharacterized protein" ... 360 3.8e-42 2
MGI|MGI:2388633 - symbol:Cltc "clathrin, heavy polypeptid... 360 3.9e-42 2
UNIPROTKB|F1MPU0 - symbol:CLTC "Clathrin heavy chain 1" s... 356 1.0e-41 2
UNIPROTKB|P49951 - symbol:CLTC "Clathrin heavy chain 1" s... 356 1.0e-41 2
UNIPROTKB|F1PHQ0 - symbol:CLTC "Uncharacterized protein" ... 356 1.0e-41 2
UNIPROTKB|Q00610 - symbol:CLTC "Clathrin heavy chain 1" s... 356 1.0e-41 2
RGD|2364 - symbol:Cltc "clathrin, heavy chain (Hc)" speci... 356 1.0e-41 2
UNIPROTKB|P11442 - symbol:Cltc "Clathrin heavy chain 1" s... 356 1.0e-41 2
UNIPROTKB|D4AD25 - symbol:Cltc "Clathrin heavy chain 1" s... 356 1.0e-41 2
ZFIN|ZDB-GENE-050227-12 - symbol:cltcb "clathrin, heavy p... 350 4.5e-41 2
WB|WBGene00011867 - symbol:chc-1 species:6239 "Caenorhabd... 323 7.5e-37 2
UNIPROTKB|J3KR87 - symbol:CLTCL1 "Clathrin heavy chain 2"... 318 1.1e-36 2
UNIPROTKB|P53675 - symbol:CLTCL1 "Clathrin heavy chain 2"... 318 2.4e-36 2
UNIPROTKB|F1P3J0 - symbol:CLTC "Uncharacterized protein" ... 360 5.2e-33 1
UNIPROTKB|F1NYC4 - symbol:CLTCL1 "Uncharacterized protein... 354 8.2e-31 1
UNIPROTKB|F1PGV0 - symbol:CLTCL1 "Uncharacterized protein... 332 1.7e-28 1
DICTYBASE|DDB_G0277221 - symbol:chcA "clathrin heavy chai... 232 1.2e-25 2
TAIR|locus:2074733 - symbol:AT3G11130 species:3702 "Arabi... 243 1.0e-24 2
TAIR|locus:2103442 - symbol:AT3G08530 species:3702 "Arabi... 242 1.3e-24 2
ASPGD|ASPL0000070963 - symbol:AN4463 species:162425 "Emer... 206 1.0e-22 2
UNIPROTKB|G4N0Z8 - symbol:MGG_07768 "Clathrin heavy chain... 205 2.7e-22 2
GENEDB_PFALCIPARUM|PFL0930w - symbol:PFL0930w "clathrin h... 175 2.1e-17 2
UNIPROTKB|Q8I5L6 - symbol:PFL0930w "Clathrin heavy chain,... 175 2.1e-17 2
POMBASE|SPAC26A3.05 - symbol:chc1 "clathrin heavy chain C... 220 1.5e-16 1
SGD|S000003174 - symbol:CHC1 "Clathrin heavy chain" speci... 190 2.3e-13 1
CGD|CAL0005122 - symbol:orf19.3496 species:5476 "Candida ... 164 1.3e-10 1
UNIPROTKB|F1NK83 - symbol:CLTC "Uncharacterized protein" ... 132 7.6e-09 1
UNIPROTKB|J3KS13 - symbol:CLTC "Clathrin heavy chain 1" s... 101 0.00021 1
>FB|FBgn0000319 [details] [associations]
symbol:Chc "Clathrin heavy chain" species:7227 "Drosophila
melanogaster" [GO:0007291 "sperm individualization" evidence=IMP]
[GO:0016183 "synaptic vesicle coating" evidence=NAS;TAS]
[GO:0008021 "synaptic vesicle" evidence=TAS] [GO:0030125 "clathrin
vesicle coat" evidence=TAS] [GO:0005905 "coated pit" evidence=TAS]
[GO:0030135 "coated vesicle" evidence=TAS] [GO:0007269
"neurotransmitter secretion" evidence=NAS] [GO:0030129 "clathrin
coat of synaptic vesicle" evidence=NAS] [GO:0030132 "clathrin coat
of coated pit" evidence=IEA;NAS] [GO:0030130 "clathrin coat of
trans-Golgi network vesicle" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0033227 "dsRNA transport"
evidence=IMP] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0035002 "liquid clearance, open tracheal system" evidence=IMP]
[GO:0030198 "extracellular matrix organization" evidence=IMP]
[GO:0035159 "regulation of tube length, open tracheal system"
evidence=IMP] [GO:0045807 "positive regulation of endocytosis"
evidence=IMP] [GO:0046667 "compound eye retinal cell programmed
cell death" evidence=IMP] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0030136 "clathrin-coated vesicle" evidence=IDA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] [GO:0044459 "plasma membrane
part" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006897 "endocytosis" evidence=IMP] [GO:0045747 "positive
regulation of Notch signaling pathway" evidence=IMP] [GO:0040008
"regulation of growth" evidence=IMP] [GO:0033363 "secretory granule
organization" evidence=IMP] [GO:0030141 "secretory granule"
evidence=IDA] [GO:0007594 "puparial adhesion" evidence=IMP]
[GO:0048749 "compound eye development" evidence=IMP]
InterPro:IPR000547 InterPro:IPR001473 InterPro:IPR011990
InterPro:IPR015348 InterPro:IPR016024 InterPro:IPR016025
Pfam:PF00637 Pfam:PF09268 SMART:SM00299 GO:GO:0048471 GO:GO:0006886
SUPFAM:SSF48371 GO:GO:0005811 GO:GO:0005198 GO:GO:0008021
EMBL:AE014298 GO:GO:0030141 GO:GO:0030198 GO:GO:0005905
GO:GO:0045747 GO:GO:0045807 GO:GO:0007291 Gene3D:1.25.40.10
GO:GO:0040008 GO:GO:0005802 GO:GO:0033227 GO:GO:0007269
GO:GO:0030130 GO:GO:0016183 GO:GO:0030132 GO:GO:0030125
GO:GO:0033363 GO:GO:0046667 GO:GO:0035159 GO:GO:0044459
eggNOG:NOG314149 KO:K04646 Gene3D:2.130.10.110 InterPro:IPR022365
InterPro:IPR016341 Pfam:PF01394 PIRSF:PIRSF002290 SUPFAM:SSF50989
GeneTree:ENSGT00400000022107 EMBL:Z14133 EMBL:AY119615 PIR:S52588
RefSeq:NP_001096993.1 RefSeq:NP_001096994.1 RefSeq:NP_477042.1
RefSeq:NP_727901.1 RefSeq:NP_996451.1 RefSeq:NP_996452.1
UniGene:Dm.3174 ProteinModelPortal:P29742 SMR:P29742 DIP:DIP-17970N
IntAct:P29742 MINT:MINT-1330735 STRING:P29742 PaxDb:P29742
PRIDE:P29742 EnsemblMetazoa:FBtr0074179 EnsemblMetazoa:FBtr0074180
EnsemblMetazoa:FBtr0074181 EnsemblMetazoa:FBtr0074182
EnsemblMetazoa:FBtr0112797 EnsemblMetazoa:FBtr0112798 GeneID:32537
KEGG:dme:Dmel_CG9012 CTD:32537 FlyBase:FBgn0000319
InParanoid:P29742 OMA:VWSRLAK OrthoDB:EOG4FFBGN PhylomeDB:P29742
ChiTaRS:Chc GenomeRNAi:32537 NextBio:778992 Bgee:P29742
GermOnline:CG9012 GO:GO:0035002 GO:GO:0007594 Uniprot:P29742
Length = 1678
Score = 387 (141.3 bits), Expect = 4.2e-45, Sum P(2) = 4.2e-45
Identities = 75/98 (76%), Positives = 86/98 (87%)
Query: 33 VDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKADDPSAYMDVVETSHATE 92
V++L + + RCNEP VWSQLAKAQLQ+GLVKE+IDS+IKADDPSAY+DVV+ + E
Sbjct: 1090 VNNLERANEFAERCNEPAVWSQLAKAQLQQGLVKEAIDSYIKADDPSAYVDVVDVASKVE 1149
Query: 93 SWEDLVRYLQMARKKARESYIESELIYAYARTNRLADL 130
SW+DLVRYLQMARKKARESYIESELIYAYART RLADL
Sbjct: 1150 SWDDLVRYLQMARKKARESYIESELIYAYARTGRLADL 1187
Score = 133 (51.9 bits), Expect = 4.2e-45, Sum P(2) = 4.2e-45
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 4 CTEPATHNALAKIYIDSNNNPERFLK 29
C EPATHNALAKIYIDSNNNPER+LK
Sbjct: 871 CVEPATHNALAKIYIDSNNNPERYLK 896
Score = 34 (17.0 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 15/52 (28%), Positives = 21/52 (40%)
Query: 45 RCNEPGVWSQLAKAQLQKGLVKESIDSFIKADDPSAYMDVVETSHATESWED 96
R N P V A L LV D + + D+ M +H TE+W +
Sbjct: 1343 RVNIPKVLRAAESAHLWSELVF-LYDKYEEYDNAVLAM----MAHPTEAWRE 1389
>UNIPROTKB|K7GQL8 [details] [associations]
symbol:CLTC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016192 "vesicle-mediated transport" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
InterPro:IPR000547 InterPro:IPR011990 InterPro:IPR016024
Pfam:PF00637 SMART:SM00299 SUPFAM:SSF48371 Gene3D:1.25.40.10
GeneTree:ENSGT00400000022107 EMBL:CU639474
Ensembl:ENSSSCT00000033168 Uniprot:K7GQL8
Length = 911
Score = 356 (130.4 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 67/102 (65%), Positives = 88/102 (86%)
Query: 32 LVDH---LSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKADDPSAYMDVVETS 88
L++H L + + RCNEP VWSQLAKAQLQKG+VKE+IDS+IKADDPS+YM+VV+ +
Sbjct: 321 LIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEVVQAA 380
Query: 89 HATESWEDLVRYLQMARKKARESYIESELIYAYARTNRLADL 130
+ + +WE+LV+YLQMARKKARESY+E+ELI+A A+TNRLA+L
Sbjct: 381 NTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAEL 422
Score = 132 (51.5 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 4 CTEPATHNALAKIYIDSNNNPERFLK 29
C EPATHNALAKIYIDSNNNPERFL+
Sbjct: 106 CEEPATHNALAKIYIDSNNNPERFLR 131
Score = 39 (18.8 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 11/64 (17%), Positives = 28/64 (43%)
Query: 42 YVLRCNEPGVWSQ--LAKAQLQKGLVKESIDSFI-KADDPSAYMDVVETSHATESWEDLV 98
Y++R +P +W L ++ L+ + + + + + DP V+ + +L+
Sbjct: 182 YLVRRKDPELWGSVLLESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELI 241
Query: 99 RYLQ 102
L+
Sbjct: 242 ELLE 245
>UNIPROTKB|F6PV15 [details] [associations]
symbol:CLTC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016192 "vesicle-mediated transport" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
InterPro:IPR000547 InterPro:IPR011990 InterPro:IPR016024
Pfam:PF00637 SMART:SM00299 GO:GO:0006886 SUPFAM:SSF48371
GO:GO:0016192 GO:GO:0005622 Gene3D:1.25.40.10 eggNOG:NOG314149
HOGENOM:HOG000188877 OrthoDB:EOG4TXBR0 GeneTree:ENSGT00400000022107
EMBL:CU639474 Ensembl:ENSSSCT00000019230 OMA:ETSAMST Uniprot:F6PV15
Length = 919
Score = 356 (130.4 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 67/102 (65%), Positives = 88/102 (86%)
Query: 32 LVDH---LSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKADDPSAYMDVVETS 88
L++H L + + RCNEP VWSQLAKAQLQKG+VKE+IDS+IKADDPS+YM+VV+ +
Sbjct: 329 LIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEVVQAA 388
Query: 89 HATESWEDLVRYLQMARKKARESYIESELIYAYARTNRLADL 130
+ + +WE+LV+YLQMARKKARESY+E+ELI+A A+TNRLA+L
Sbjct: 389 NTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAEL 430
Score = 132 (51.5 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 4 CTEPATHNALAKIYIDSNNNPERFLK 29
C EPATHNALAKIYIDSNNNPERFL+
Sbjct: 114 CEEPATHNALAKIYIDSNNNPERFLR 139
Score = 39 (18.8 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 11/64 (17%), Positives = 28/64 (43%)
Query: 42 YVLRCNEPGVWSQ--LAKAQLQKGLVKESIDSFI-KADDPSAYMDVVETSHATESWEDLV 98
Y++R +P +W L ++ L+ + + + + + DP V+ + +L+
Sbjct: 190 YLVRRKDPELWGSVLLESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELI 249
Query: 99 RYLQ 102
L+
Sbjct: 250 ELLE 253
>ZFIN|ZDB-GENE-030131-2299 [details] [associations]
symbol:cltca "clathrin, heavy polypeptide a (Hc)"
species:7955 "Danio rerio" [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030130 "clathrin coat of trans-Golgi network
vesicle" evidence=IEA] [GO:0030132 "clathrin coat of coated pit"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR000547 InterPro:IPR001473
InterPro:IPR011990 InterPro:IPR015348 InterPro:IPR016024
InterPro:IPR016025 Pfam:PF00637 Pfam:PF09268 SMART:SM00299
ZFIN:ZDB-GENE-030131-2299 GO:GO:0006886 SUPFAM:SSF48371
GO:GO:0016192 GO:GO:0005198 Gene3D:1.25.40.10 GO:GO:0030130
GO:GO:0030132 KO:K04646 Gene3D:2.130.10.110 InterPro:IPR022365
InterPro:IPR016341 Pfam:PF01394 PIRSF:PIRSF002290 SUPFAM:SSF50989
HOVERGEN:HBG005344 EMBL:AY648777 IPI:IPI00512912
RefSeq:NP_001005391.2 UniGene:Dr.77490 ProteinModelPortal:Q6DRI2
SMR:Q6DRI2 STRING:Q6DRI2 PRIDE:Q6DRI2 GeneID:323579 KEGG:dre:323579
CTD:323579 InParanoid:Q6DRI2 NextBio:20808333 ArrayExpress:Q6DRI2
Bgee:Q6DRI2 Uniprot:Q6DRI2
Length = 1680
Score = 361 (132.1 bits), Expect = 3.1e-42, Sum P(2) = 3.1e-42
Identities = 70/102 (68%), Positives = 87/102 (85%)
Query: 32 LVDH---LSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKADDPSAYMDVVETS 88
L++H L + + RCNEP VWSQLAKAQLQKGLVKESIDS+IKADDPSAYM+VV+ +
Sbjct: 1085 LIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKESIDSYIKADDPSAYMEVVQAA 1144
Query: 89 HATESWEDLVRYLQMARKKARESYIESELIYAYARTNRLADL 130
+ +WEDLV++LQMARKKARESY+E+ELI+A A+TNRLA+L
Sbjct: 1145 DQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAEL 1186
Score = 132 (51.5 bits), Expect = 3.1e-42, Sum P(2) = 3.1e-42
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 4 CTEPATHNALAKIYIDSNNNPERFLK 29
C EPATHNALAKIYIDSNNNPERFL+
Sbjct: 870 CEEPATHNALAKIYIDSNNNPERFLR 895
Score = 41 (19.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 24/87 (27%), Positives = 37/87 (42%)
Query: 45 RCNEPGVWSQLAKAQLQKGLVKESIDSFIKADDPSAYMDVVETSHATESWEDLVRYLQMA 104
R N P V +A L LV D + + D+ M SH T++W++ ++ +
Sbjct: 1342 RVNIPKVLRAAEQAHLWAELVF-LYDKYEEFDNAIITM----MSHPTDAWKE-GQFKDII 1395
Query: 105 RKKAR-ESYIESELIYAYARTNRLADL 130
K A E Y ++ Y R L DL
Sbjct: 1396 TKVANVELYYKAIQFYLEFRPLLLNDL 1422
Score = 40 (19.1 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 11/64 (17%), Positives = 29/64 (45%)
Query: 42 YVLRCNEPGVWSQ--LAKAQLQKGLVKESIDSFI-KADDPSAYMDVVETSHATESWEDLV 98
Y++R +P +W+ L ++ L+ + + + + + DP V+ + +L+
Sbjct: 946 YLVRRRDPELWASVLLETNPFRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELI 1005
Query: 99 RYLQ 102
L+
Sbjct: 1006 ELLE 1009
>UNIPROTKB|F1NW23 [details] [associations]
symbol:CLTC "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030130 "clathrin coat of trans-Golgi network vesicle"
evidence=IEA] [GO:0030132 "clathrin coat of coated pit"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005819
"spindle" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0031623 "receptor internalization" evidence=IEA] [GO:0033572
"transferrin transport" evidence=IEA] InterPro:IPR000547
InterPro:IPR001473 InterPro:IPR011990 InterPro:IPR015348
InterPro:IPR016024 InterPro:IPR016025 Pfam:PF00637 Pfam:PF09268
SMART:SM00299 GO:GO:0005739 GO:GO:0006886 SUPFAM:SSF48371
GO:GO:0007067 GO:GO:0005819 GO:GO:0005198 GO:GO:0031623
Gene3D:1.25.40.10 GO:GO:0030130 GO:GO:0030132 Gene3D:2.130.10.110
InterPro:IPR022365 InterPro:IPR016341 Pfam:PF01394
PIRSF:PIRSF002290 SUPFAM:SSF50989 OMA:FTNYDRA GO:GO:0033572
GeneTree:ENSGT00400000022107 EMBL:AADN02025786 IPI:IPI00829409
Ensembl:ENSGALT00000008250 Uniprot:F1NW23
Length = 1662
Score = 360 (131.8 bits), Expect = 3.8e-42, Sum P(2) = 3.8e-42
Identities = 68/102 (66%), Positives = 89/102 (87%)
Query: 32 LVDH---LSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKADDPSAYMDVVETS 88
L++H L + + RCNEP VWSQLAKAQLQKG+VKE+IDS+IKADDPS+YM+VV+ +
Sbjct: 1072 LIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEVVQAA 1131
Query: 89 HATESWEDLVRYLQMARKKARESYIESELIYAYARTNRLADL 130
+A+ +WE+LV+YLQMARKKARESY+E+ELI+A A+TNRLA+L
Sbjct: 1132 NASGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAEL 1173
Score = 132 (51.5 bits), Expect = 3.8e-42, Sum P(2) = 3.8e-42
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 4 CTEPATHNALAKIYIDSNNNPERFLK 29
C EPATHNALAKIYIDSNNNPERFL+
Sbjct: 857 CEEPATHNALAKIYIDSNNNPERFLR 882
Score = 40 (19.1 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 11/64 (17%), Positives = 29/64 (45%)
Query: 42 YVLRCNEPGVWSQ--LAKAQLQKGLVKESIDSFI-KADDPSAYMDVVETSHATESWEDLV 98
Y++R +P +W+ L ++ L+ + + + + + DP V+ + +L+
Sbjct: 933 YLVRRKDPELWASVLLESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELI 992
Query: 99 RYLQ 102
L+
Sbjct: 993 ELLE 996
>MGI|MGI:2388633 [details] [associations]
symbol:Cltc "clathrin, heavy polypeptide (Hc)" species:10090
"Mus musculus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005819
"spindle" evidence=ISO] [GO:0005905 "coated pit" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006898 "receptor-mediated endocytosis" evidence=ISO]
[GO:0007030 "Golgi organization" evidence=ISO] [GO:0007067
"mitosis" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IDA] [GO:0030118 "clathrin coat" evidence=ISO]
[GO:0030130 "clathrin coat of trans-Golgi network vesicle"
evidence=IEA] [GO:0030132 "clathrin coat of coated pit"
evidence=IEA] [GO:0030136 "clathrin-coated vesicle" evidence=ISO]
[GO:0030315 "T-tubule" evidence=ISO] [GO:0030506 "ankyrin binding"
evidence=ISO] [GO:0031072 "heat shock protein binding"
evidence=ISO] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031523 "Myb complex" evidence=ISO] [GO:0031623 "receptor
internalization" evidence=ISO] [GO:0033572 "transferrin transport"
evidence=ISO] [GO:0042277 "peptide binding" evidence=ISO]
[GO:0042383 "sarcolemma" evidence=ISO] [GO:0070062 "extracellular
vesicular exosome" evidence=ISO] [GO:0090307 "spindle assembly
involved in mitosis" evidence=ISO] InterPro:IPR000547
InterPro:IPR001473 InterPro:IPR011990 InterPro:IPR015348
InterPro:IPR016024 InterPro:IPR016025 Pfam:PF00637 Pfam:PF09268
SMART:SM00299 MGI:MGI:2388633 GO:GO:0005739 GO:GO:0042470
GO:GO:0006886 SUPFAM:SSF48371 GO:GO:0030117 GO:GO:0005819
GO:GO:0005198 GO:GO:0031623 Gene3D:1.25.40.10 GO:GO:0090307
GO:GO:0030130 GO:GO:0030132 GO:GO:0031523 eggNOG:NOG314149
KO:K04646 Gene3D:2.130.10.110 InterPro:IPR022365 InterPro:IPR016341
Pfam:PF01394 PIRSF:PIRSF002290 SUPFAM:SSF50989 CTD:1213
HOVERGEN:HBG005344 OrthoDB:EOG4TXBR0 ChiTaRS:CLTC GO:GO:0033572
EMBL:AL592222 EMBL:BC079897 IPI:IPI00169916 RefSeq:NP_001003908.1
UniGene:Mm.479526 ProteinModelPortal:Q68FD5 SMR:Q68FD5
IntAct:Q68FD5 STRING:Q68FD5 PhosphoSite:Q68FD5 PaxDb:Q68FD5
PRIDE:Q68FD5 Ensembl:ENSMUST00000103186 GeneID:67300 KEGG:mmu:67300
UCSC:uc007kta.1 GeneTree:ENSGT00400000022107 NextBio:324168
Bgee:Q68FD5 CleanEx:MM_CLTC Genevestigator:Q68FD5
GermOnline:ENSMUSG00000047126 Uniprot:Q68FD5
Length = 1675
Score = 360 (131.8 bits), Expect = 3.9e-42, Sum P(2) = 3.9e-42
Identities = 68/102 (66%), Positives = 89/102 (87%)
Query: 32 LVDH---LSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKADDPSAYMDVVETS 88
L++H L + + RCNEP VWSQLAKAQLQKG+VKE+IDS+IKADDPS+YM+VV+ +
Sbjct: 1085 LIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEVVQAA 1144
Query: 89 HATESWEDLVRYLQMARKKARESYIESELIYAYARTNRLADL 130
+A+ +WE+LV+YLQMARKKARESY+E+ELI+A A+TNRLA+L
Sbjct: 1145 NASGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAEL 1186
Score = 132 (51.5 bits), Expect = 3.9e-42, Sum P(2) = 3.9e-42
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 4 CTEPATHNALAKIYIDSNNNPERFLK 29
C EPATHNALAKIYIDSNNNPERFL+
Sbjct: 870 CEEPATHNALAKIYIDSNNNPERFLR 895
Score = 39 (18.8 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 11/64 (17%), Positives = 28/64 (43%)
Query: 42 YVLRCNEPGVWSQ--LAKAQLQKGLVKESIDSFI-KADDPSAYMDVVETSHATESWEDLV 98
Y++R +P +W L ++ L+ + + + + + DP V+ + +L+
Sbjct: 946 YLVRRKDPELWGSVLLESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELI 1005
Query: 99 RYLQ 102
L+
Sbjct: 1006 ELLE 1009
>UNIPROTKB|F1MPU0 [details] [associations]
symbol:CLTC "Clathrin heavy chain 1" species:9913 "Bos
taurus" [GO:0033572 "transferrin transport" evidence=IEA]
[GO:0031623 "receptor internalization" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0030132 "clathrin
coat of coated pit" evidence=IEA] [GO:0030130 "clathrin coat of
trans-Golgi network vesicle" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR000547
InterPro:IPR001473 InterPro:IPR011990 InterPro:IPR015348
InterPro:IPR016024 InterPro:IPR016025 Pfam:PF00637 Pfam:PF09268
SMART:SM00299 GO:GO:0005739 GO:GO:0006886 SUPFAM:SSF48371
GO:GO:0007067 GO:GO:0005819 GO:GO:0005198 GO:GO:0031623
Gene3D:1.25.40.10 GO:GO:0030130 GO:GO:0030132 Gene3D:2.130.10.110
InterPro:IPR022365 InterPro:IPR016341 Pfam:PF01394
PIRSF:PIRSF002290 SUPFAM:SSF50989 OMA:FTNYDRA IPI:IPI00688816
GO:GO:0033572 GeneTree:ENSGT00400000022107 EMBL:DAAA02048338
EMBL:DAAA02048339 Ensembl:ENSBTAT00000022210 Uniprot:F1MPU0
Length = 1661
Score = 356 (130.4 bits), Expect = 1.0e-41, Sum P(2) = 1.0e-41
Identities = 67/102 (65%), Positives = 88/102 (86%)
Query: 32 LVDH---LSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKADDPSAYMDVVETS 88
L++H L + + RCNEP VWSQLAKAQLQKG+VKE+IDS+IKADDPS+YM+VV+ +
Sbjct: 1071 LIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEVVQAA 1130
Query: 89 HATESWEDLVRYLQMARKKARESYIESELIYAYARTNRLADL 130
+ + +WE+LV+YLQMARKKARESY+E+ELI+A A+TNRLA+L
Sbjct: 1131 NTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAEL 1172
Score = 132 (51.5 bits), Expect = 1.0e-41, Sum P(2) = 1.0e-41
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 4 CTEPATHNALAKIYIDSNNNPERFLK 29
C EPATHNALAKIYIDSNNNPERFL+
Sbjct: 857 CEEPATHNALAKIYIDSNNNPERFLR 882
>UNIPROTKB|P49951 [details] [associations]
symbol:CLTC "Clathrin heavy chain 1" species:9913 "Bos
taurus" [GO:0030117 "membrane coat" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0042470 "melanosome"
evidence=IEA] [GO:0030132 "clathrin coat of coated pit"
evidence=IEA] [GO:0030130 "clathrin coat of trans-Golgi network
vesicle" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR000547 InterPro:IPR001473
InterPro:IPR011990 InterPro:IPR015348 InterPro:IPR016024
InterPro:IPR016025 Pfam:PF00637 Pfam:PF09268 SMART:SM00299
GO:GO:0005739 GO:GO:0042470 GO:GO:0006886 SUPFAM:SSF48371
GO:GO:0030117 GO:GO:0016192 GO:GO:0005198 Gene3D:1.25.40.10
PDB:1UTC PDBsum:1UTC GO:GO:0030130 GO:GO:0030132 PDB:3GC3 PDB:3GD1
PDBsum:3GC3 PDBsum:3GD1 PDB:1XI5 PDBsum:1XI5 eggNOG:NOG314149
KO:K04646 Gene3D:2.130.10.110 InterPro:IPR022365 InterPro:IPR016341
Pfam:PF01394 PIRSF:PIRSF002290 SUPFAM:SSF50989 PDB:1XI4 PDB:3IYV
PDBsum:1XI4 PDBsum:3IYV PDB:3LVG PDB:3LVH PDBsum:3LVG PDBsum:3LVH
EMBL:U31757 IPI:IPI00688816 RefSeq:NP_776448.1 UniGene:Bt.44506
PDB:1B89 PDB:3QIL PDBsum:1B89 PDBsum:3QIL ProteinModelPortal:P49951
SMR:P49951 IntAct:P49951 MINT:MINT-122490 STRING:P49951
PRIDE:P49951 GeneID:281080 KEGG:bta:281080 CTD:1213
HOVERGEN:HBG005344 EvolutionaryTrace:P49951 NextBio:20805158
Uniprot:P49951
Length = 1675
Score = 356 (130.4 bits), Expect = 1.0e-41, Sum P(2) = 1.0e-41
Identities = 67/102 (65%), Positives = 88/102 (86%)
Query: 32 LVDH---LSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKADDPSAYMDVVETS 88
L++H L + + RCNEP VWSQLAKAQLQKG+VKE+IDS+IKADDPS+YM+VV+ +
Sbjct: 1085 LIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEVVQAA 1144
Query: 89 HATESWEDLVRYLQMARKKARESYIESELIYAYARTNRLADL 130
+ + +WE+LV+YLQMARKKARESY+E+ELI+A A+TNRLA+L
Sbjct: 1145 NTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAEL 1186
Score = 132 (51.5 bits), Expect = 1.0e-41, Sum P(2) = 1.0e-41
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 4 CTEPATHNALAKIYIDSNNNPERFLK 29
C EPATHNALAKIYIDSNNNPERFL+
Sbjct: 870 CEEPATHNALAKIYIDSNNNPERFLR 895
Score = 39 (18.8 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 11/64 (17%), Positives = 28/64 (43%)
Query: 42 YVLRCNEPGVWSQ--LAKAQLQKGLVKESIDSFI-KADDPSAYMDVVETSHATESWEDLV 98
Y++R +P +W L ++ L+ + + + + + DP V+ + +L+
Sbjct: 946 YLVRRKDPELWGSVLLESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELI 1005
Query: 99 RYLQ 102
L+
Sbjct: 1006 ELLE 1009
>UNIPROTKB|F1PHQ0 [details] [associations]
symbol:CLTC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0033572 "transferrin transport" evidence=IEA]
[GO:0031623 "receptor internalization" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0030132 "clathrin
coat of coated pit" evidence=IEA] [GO:0030130 "clathrin coat of
trans-Golgi network vesicle" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR000547
InterPro:IPR001473 InterPro:IPR011990 InterPro:IPR015348
InterPro:IPR016024 InterPro:IPR016025 Pfam:PF00637 Pfam:PF09268
SMART:SM00299 GO:GO:0005739 GO:GO:0006886 SUPFAM:SSF48371
GO:GO:0007067 GO:GO:0005819 GO:GO:0005198 GO:GO:0031623
Gene3D:1.25.40.10 GO:GO:0030130 GO:GO:0030132 KO:K04646
Gene3D:2.130.10.110 InterPro:IPR022365 InterPro:IPR016341
Pfam:PF01394 PIRSF:PIRSF002290 SUPFAM:SSF50989 OMA:FTNYDRA CTD:1213
GO:GO:0033572 GeneTree:ENSGT00400000022107 EMBL:AAEX03006586
RefSeq:XP_537700.2 Ensembl:ENSCAFT00000028003 GeneID:480578
KEGG:cfa:480578 Uniprot:F1PHQ0
Length = 1675
Score = 356 (130.4 bits), Expect = 1.0e-41, Sum P(2) = 1.0e-41
Identities = 67/102 (65%), Positives = 88/102 (86%)
Query: 32 LVDH---LSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKADDPSAYMDVVETS 88
L++H L + + RCNEP VWSQLAKAQLQKG+VKE+IDS+IKADDPS+YM+VV+ +
Sbjct: 1085 LIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEVVQAA 1144
Query: 89 HATESWEDLVRYLQMARKKARESYIESELIYAYARTNRLADL 130
+ + +WE+LV+YLQMARKKARESY+E+ELI+A A+TNRLA+L
Sbjct: 1145 NTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAEL 1186
Score = 132 (51.5 bits), Expect = 1.0e-41, Sum P(2) = 1.0e-41
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 4 CTEPATHNALAKIYIDSNNNPERFLK 29
C EPATHNALAKIYIDSNNNPERFL+
Sbjct: 870 CEEPATHNALAKIYIDSNNNPERFLR 895
Score = 39 (18.8 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 11/64 (17%), Positives = 28/64 (43%)
Query: 42 YVLRCNEPGVWSQ--LAKAQLQKGLVKESIDSFI-KADDPSAYMDVVETSHATESWEDLV 98
Y++R +P +W L ++ L+ + + + + + DP V+ + +L+
Sbjct: 946 YLVRRKDPELWGSVLLESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELI 1005
Query: 99 RYLQ 102
L+
Sbjct: 1006 ELLE 1009
>UNIPROTKB|Q00610 [details] [associations]
symbol:CLTC "Clathrin heavy chain 1" species:9606 "Homo
sapiens" [GO:0030130 "clathrin coat of trans-Golgi network vesicle"
evidence=IEA] [GO:0030132 "clathrin coat of coated pit"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0042470
"melanosome" evidence=IEA] [GO:0030118 "clathrin coat"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=NAS] [GO:0005198 "structural molecule activity"
evidence=NAS] [GO:0030136 "clathrin-coated vesicle" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005819 "spindle"
evidence=IDA] [GO:0007067 "mitosis" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0070062
"extracellular vesicular exosome" evidence=IDA] [GO:0005829
"cytosol" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006892 "post-Golgi vesicle-mediated transport" evidence=TAS]
[GO:0007173 "epidermal growth factor receptor signaling pathway"
evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS] [GO:0016044
"cellular membrane organization" evidence=TAS] [GO:0019886 "antigen
processing and presentation of exogenous peptide antigen via MHC
class II" evidence=TAS] [GO:0030669 "clathrin-coated endocytic
vesicle membrane" evidence=TAS] [GO:0032588 "trans-Golgi network
membrane" evidence=TAS] [GO:0042059 "negative regulation of
epidermal growth factor receptor signaling pathway" evidence=TAS]
[GO:0048011 "neurotrophin TRK receptor signaling pathway"
evidence=TAS] [GO:0031623 "receptor internalization" evidence=IMP]
[GO:0033572 "transferrin transport" evidence=IMP]
Reactome:REACT_11123 InterPro:IPR000547 InterPro:IPR001473
InterPro:IPR011990 InterPro:IPR015348 InterPro:IPR016024
InterPro:IPR016025 Pfam:PF00637 Pfam:PF09268 SMART:SM00299
GO:GO:0005829 GO:GO:0005739 GO:GO:0005886 GO:GO:0042470
Reactome:REACT_111045 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0007411 GO:GO:0007173 GO:GO:0048011
GO:GO:0006886 SUPFAM:SSF48371 GO:GO:0007067 GO:GO:0005819
GO:GO:0030669 GO:GO:0032588 GO:GO:0019886 GO:GO:0005198
GO:GO:0070062 Pathway_Interaction_DB:arf6_traffickingpathway
GO:GO:0031623 Gene3D:1.25.40.10 EMBL:CH471109 GO:GO:0030118
GO:GO:0016044 GO:GO:0006892 GO:GO:0030130 GO:GO:0042059
GO:GO:0030132 eggNOG:NOG314149 HOGENOM:HOG000188877 KO:K04646
Gene3D:2.130.10.110 InterPro:IPR022365 InterPro:IPR016341
Pfam:PF01394 PIRSF:PIRSF002290 SUPFAM:SSF50989 OMA:FTNYDRA CTD:1213
HOVERGEN:HBG005344 EMBL:D21260 EMBL:BX640615 EMBL:BC051800
EMBL:BC054489 EMBL:X55878 IPI:IPI00024067 IPI:IPI00455383
PIR:A40573 RefSeq:NP_004850.1 UniGene:Hs.491351 PDB:2XZG PDB:4G55
PDBsum:2XZG PDBsum:4G55 ProteinModelPortal:Q00610 SMR:Q00610
IntAct:Q00610 MINT:MINT-4998595 STRING:Q00610 PhosphoSite:Q00610
DMDM:1705916 PaxDb:Q00610 PRIDE:Q00610 DNASU:1213
Ensembl:ENST00000269122 Ensembl:ENST00000393043 GeneID:1213
KEGG:hsa:1213 UCSC:uc002ixp.3 UCSC:uc002ixq.1 GeneCards:GC17P057697
H-InvDB:HIX0039315 HGNC:HGNC:2092 HPA:CAB010389 HPA:CAB011571
HPA:CAB017155 MIM:118955 neXtProt:NX_Q00610 PharmGKB:PA26618
InParanoid:Q00610 OrthoDB:EOG4TXBR0 PhylomeDB:Q00610 ChiTaRS:CLTC
EvolutionaryTrace:Q00610 GenomeRNAi:1213 NextBio:4999
ArrayExpress:Q00610 Bgee:Q00610 CleanEx:HS_CLTC
Genevestigator:Q00610 GermOnline:ENSG00000141367 GO:GO:0033572
Uniprot:Q00610
Length = 1675
Score = 356 (130.4 bits), Expect = 1.0e-41, Sum P(2) = 1.0e-41
Identities = 67/102 (65%), Positives = 88/102 (86%)
Query: 32 LVDH---LSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKADDPSAYMDVVETS 88
L++H L + + RCNEP VWSQLAKAQLQKG+VKE+IDS+IKADDPS+YM+VV+ +
Sbjct: 1085 LIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEVVQAA 1144
Query: 89 HATESWEDLVRYLQMARKKARESYIESELIYAYARTNRLADL 130
+ + +WE+LV+YLQMARKKARESY+E+ELI+A A+TNRLA+L
Sbjct: 1145 NTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAEL 1186
Score = 132 (51.5 bits), Expect = 1.0e-41, Sum P(2) = 1.0e-41
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 4 CTEPATHNALAKIYIDSNNNPERFLK 29
C EPATHNALAKIYIDSNNNPERFL+
Sbjct: 870 CEEPATHNALAKIYIDSNNNPERFLR 895
Score = 39 (18.8 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 11/64 (17%), Positives = 28/64 (43%)
Query: 42 YVLRCNEPGVWSQ--LAKAQLQKGLVKESIDSFI-KADDPSAYMDVVETSHATESWEDLV 98
Y++R +P +W L ++ L+ + + + + + DP V+ + +L+
Sbjct: 946 YLVRRKDPELWGSVLLESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELI 1005
Query: 99 RYLQ 102
L+
Sbjct: 1006 ELLE 1009
>RGD|2364 [details] [associations]
symbol:Cltc "clathrin, heavy chain (Hc)" species:10116 "Rattus
norvegicus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005739
"mitochondrion" evidence=IEA;ISO] [GO:0005819 "spindle"
evidence=IEA;ISO;IDA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006898 "receptor-mediated endocytosis"
evidence=ISO;IMP] [GO:0007030 "Golgi organization" evidence=IMP]
[GO:0007067 "mitosis" evidence=IEA;ISO;IMP] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0030117 "membrane coat"
evidence=ISO] [GO:0030118 "clathrin coat" evidence=IDA;TAS]
[GO:0030130 "clathrin coat of trans-Golgi network vesicle"
evidence=IEA] [GO:0030132 "clathrin coat of coated pit" evidence=IEA]
[GO:0030136 "clathrin-coated vesicle" evidence=ISO] [GO:0030315
"T-tubule" evidence=IDA] [GO:0030506 "ankyrin binding" evidence=IDA]
[GO:0030669 "clathrin-coated endocytic vesicle membrane"
evidence=TAS] [GO:0031072 "heat shock protein binding" evidence=IDA]
[GO:0031623 "receptor internalization" evidence=IEA;ISO] [GO:0033572
"transferrin transport" evidence=IEA;ISO] [GO:0042277 "peptide
binding" evidence=IDA] [GO:0042383 "sarcolemma" evidence=IDA]
[GO:0042470 "melanosome" evidence=IEA] [GO:0070062 "extracellular
vesicular exosome" evidence=ISO] InterPro:IPR000547
InterPro:IPR001473 InterPro:IPR011990 InterPro:IPR015348
InterPro:IPR016024 InterPro:IPR016025 Pfam:PF00637 Pfam:PF09268
SMART:SM00299 RGD:2364 GO:GO:0006898 GO:GO:0042470
Reactome:REACT_111984 GO:GO:0006886 SUPFAM:SSF48371 GO:GO:0007067
GO:GO:0005819 GO:GO:0030669 GO:GO:0005198 GO:GO:0030315 GO:GO:0042277
Gene3D:1.25.40.10 GO:GO:0030118 GO:GO:0030130 GO:GO:0030132
GO:GO:0007030 GO:GO:0031072 GO:GO:0030506 eggNOG:NOG314149
HOGENOM:HOG000188877 KO:K04646 Gene3D:2.130.10.110 InterPro:IPR022365
InterPro:IPR016341 Pfam:PF01394 PIRSF:PIRSF002290 SUPFAM:SSF50989
CTD:1213 HOVERGEN:HBG005344 EMBL:J03583 IPI:IPI00193983 PIR:A39941
RefSeq:NP_062172.1 UniGene:Rn.3589 PDB:1BPO PDB:1C9I PDB:1C9L
PDBsum:1BPO PDBsum:1C9I PDBsum:1C9L ProteinModelPortal:P11442
SMR:P11442 IntAct:P11442 MINT:MINT-93121 STRING:P11442
PhosphoSite:P11442 World-2DPAGE:0004:P11442 PRIDE:P11442 GeneID:54241
KEGG:rno:54241 EvolutionaryTrace:P11442 NextBio:610700
ArrayExpress:P11442 Genevestigator:P11442
GermOnline:ENSRNOG00000004291 Uniprot:P11442
Length = 1675
Score = 356 (130.4 bits), Expect = 1.0e-41, Sum P(2) = 1.0e-41
Identities = 67/102 (65%), Positives = 88/102 (86%)
Query: 32 LVDH---LSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKADDPSAYMDVVETS 88
L++H L + + RCNEP VWSQLAKAQLQKG+VKE+IDS+IKADDPS+YM+VV+ +
Sbjct: 1085 LIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEVVQAA 1144
Query: 89 HATESWEDLVRYLQMARKKARESYIESELIYAYARTNRLADL 130
+ + +WE+LV+YLQMARKKARESY+E+ELI+A A+TNRLA+L
Sbjct: 1145 NTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAEL 1186
Score = 132 (51.5 bits), Expect = 1.0e-41, Sum P(2) = 1.0e-41
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 4 CTEPATHNALAKIYIDSNNNPERFLK 29
C EPATHNALAKIYIDSNNNPERFL+
Sbjct: 870 CEEPATHNALAKIYIDSNNNPERFLR 895
Score = 39 (18.8 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 11/64 (17%), Positives = 28/64 (43%)
Query: 42 YVLRCNEPGVWSQ--LAKAQLQKGLVKESIDSFI-KADDPSAYMDVVETSHATESWEDLV 98
Y++R +P +W L ++ L+ + + + + + DP V+ + +L+
Sbjct: 946 YLVRRKDPELWGSVLLESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELI 1005
Query: 99 RYLQ 102
L+
Sbjct: 1006 ELLE 1009
>UNIPROTKB|P11442 [details] [associations]
symbol:Cltc "Clathrin heavy chain 1" species:10116 "Rattus
norvegicus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0030130 "clathrin coat of trans-Golgi network
vesicle" evidence=IEA] [GO:0030132 "clathrin coat of coated pit"
evidence=IEA] InterPro:IPR000547 InterPro:IPR001473
InterPro:IPR011990 InterPro:IPR015348 InterPro:IPR016024
InterPro:IPR016025 Pfam:PF00637 Pfam:PF09268 SMART:SM00299 RGD:2364
GO:GO:0006898 GO:GO:0042470 Reactome:REACT_111984 GO:GO:0006886
SUPFAM:SSF48371 GO:GO:0007067 GO:GO:0005819 GO:GO:0030669
GO:GO:0005198 GO:GO:0030315 GO:GO:0042277 Gene3D:1.25.40.10
GO:GO:0030118 GO:GO:0030130 GO:GO:0030132 GO:GO:0007030
GO:GO:0031072 GO:GO:0030506 eggNOG:NOG314149 HOGENOM:HOG000188877
KO:K04646 Gene3D:2.130.10.110 InterPro:IPR022365 InterPro:IPR016341
Pfam:PF01394 PIRSF:PIRSF002290 SUPFAM:SSF50989 CTD:1213
HOVERGEN:HBG005344 EMBL:J03583 IPI:IPI00193983 PIR:A39941
RefSeq:NP_062172.1 UniGene:Rn.3589 PDB:1BPO PDB:1C9I PDB:1C9L
PDBsum:1BPO PDBsum:1C9I PDBsum:1C9L ProteinModelPortal:P11442
SMR:P11442 IntAct:P11442 MINT:MINT-93121 STRING:P11442
PhosphoSite:P11442 World-2DPAGE:0004:P11442 PRIDE:P11442
GeneID:54241 KEGG:rno:54241 EvolutionaryTrace:P11442 NextBio:610700
ArrayExpress:P11442 Genevestigator:P11442
GermOnline:ENSRNOG00000004291 Uniprot:P11442
Length = 1675
Score = 356 (130.4 bits), Expect = 1.0e-41, Sum P(2) = 1.0e-41
Identities = 67/102 (65%), Positives = 88/102 (86%)
Query: 32 LVDH---LSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKADDPSAYMDVVETS 88
L++H L + + RCNEP VWSQLAKAQLQKG+VKE+IDS+IKADDPS+YM+VV+ +
Sbjct: 1085 LIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEVVQAA 1144
Query: 89 HATESWEDLVRYLQMARKKARESYIESELIYAYARTNRLADL 130
+ + +WE+LV+YLQMARKKARESY+E+ELI+A A+TNRLA+L
Sbjct: 1145 NTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAEL 1186
Score = 132 (51.5 bits), Expect = 1.0e-41, Sum P(2) = 1.0e-41
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 4 CTEPATHNALAKIYIDSNNNPERFLK 29
C EPATHNALAKIYIDSNNNPERFL+
Sbjct: 870 CEEPATHNALAKIYIDSNNNPERFLR 895
Score = 39 (18.8 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 11/64 (17%), Positives = 28/64 (43%)
Query: 42 YVLRCNEPGVWSQ--LAKAQLQKGLVKESIDSFI-KADDPSAYMDVVETSHATESWEDLV 98
Y++R +P +W L ++ L+ + + + + + DP V+ + +L+
Sbjct: 946 YLVRRKDPELWGSVLLESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELI 1005
Query: 99 RYLQ 102
L+
Sbjct: 1006 ELLE 1009
>UNIPROTKB|D4AD25 [details] [associations]
symbol:Cltc "Clathrin heavy chain 1" species:10116 "Rattus
norvegicus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030130 "clathrin coat of trans-Golgi network
vesicle" evidence=IEA] [GO:0030132 "clathrin coat of coated pit"
evidence=IEA] InterPro:IPR000547 InterPro:IPR001473
InterPro:IPR011990 InterPro:IPR015348 InterPro:IPR016024
InterPro:IPR016025 Pfam:PF00637 Pfam:PF09268 SMART:SM00299 RGD:2364
GO:GO:0005739 GO:GO:0006886 SUPFAM:SSF48371 GO:GO:0007067
GO:GO:0005819 GO:GO:0005198 GO:GO:0031623 Gene3D:1.25.40.10
GO:GO:0030130 GO:GO:0030132 Gene3D:2.130.10.110 InterPro:IPR022365
InterPro:IPR016341 Pfam:PF01394 PIRSF:PIRSF002290 SUPFAM:SSF50989
OrthoDB:EOG4TXBR0 GO:GO:0033572 IPI:IPI00776558 PRIDE:D4AD25
Ensembl:ENSRNOT00000055800 ArrayExpress:D4AD25 Uniprot:D4AD25
Length = 1679
Score = 356 (130.4 bits), Expect = 1.0e-41, Sum P(2) = 1.0e-41
Identities = 67/102 (65%), Positives = 88/102 (86%)
Query: 32 LVDH---LSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKADDPSAYMDVVETS 88
L++H L + + RCNEP VWSQLAKAQLQKG+VKE+IDS+IKADDPS+YM+VV+ +
Sbjct: 1089 LIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEVVQAA 1148
Query: 89 HATESWEDLVRYLQMARKKARESYIESELIYAYARTNRLADL 130
+ + +WE+LV+YLQMARKKARESY+E+ELI+A A+TNRLA+L
Sbjct: 1149 NTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAEL 1190
Score = 132 (51.5 bits), Expect = 1.0e-41, Sum P(2) = 1.0e-41
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 4 CTEPATHNALAKIYIDSNNNPERFLK 29
C EPATHNALAKIYIDSNNNPERFL+
Sbjct: 874 CEEPATHNALAKIYIDSNNNPERFLR 899
Score = 39 (18.8 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 11/64 (17%), Positives = 28/64 (43%)
Query: 42 YVLRCNEPGVWSQ--LAKAQLQKGLVKESIDSFI-KADDPSAYMDVVETSHATESWEDLV 98
Y++R +P +W L ++ L+ + + + + + DP V+ + +L+
Sbjct: 950 YLVRRKDPELWGSVLLESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELI 1009
Query: 99 RYLQ 102
L+
Sbjct: 1010 ELLE 1013
>ZFIN|ZDB-GENE-050227-12 [details] [associations]
symbol:cltcb "clathrin, heavy polypeptide b (Hc)"
species:7955 "Danio rerio" [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030130 "clathrin coat of trans-Golgi network
vesicle" evidence=IEA] [GO:0030132 "clathrin coat of coated pit"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR000547 InterPro:IPR001473
InterPro:IPR011990 InterPro:IPR015348 InterPro:IPR016024
InterPro:IPR016025 Pfam:PF00637 Pfam:PF09268 SMART:SM00299
ZFIN:ZDB-GENE-050227-12 GO:GO:0006886 SUPFAM:SSF48371 GO:GO:0016192
GO:GO:0005198 Gene3D:1.25.40.10 GO:GO:0030130 GO:GO:0030132
Gene3D:2.130.10.110 InterPro:IPR022365 InterPro:IPR016341
Pfam:PF01394 PIRSF:PIRSF002290 SUPFAM:SSF50989
GeneTree:ENSGT00400000022107 EMBL:CR848791 IPI:IPI00993090
Ensembl:ENSDART00000123172 ArrayExpress:E9QG93 Bgee:E9QG93
Uniprot:E9QG93
Length = 1683
Score = 350 (128.3 bits), Expect = 4.5e-41, Sum P(2) = 4.5e-41
Identities = 68/102 (66%), Positives = 86/102 (84%)
Query: 32 LVDH---LSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKADDPSAYMDVVETS 88
L++H L + + RCNEP VWSQLAKAQLQKGLVKE+IDS+IKADDPSAYM+V + +
Sbjct: 1091 LIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYMEVGQAA 1150
Query: 89 HATESWEDLVRYLQMARKKARESYIESELIYAYARTNRLADL 130
+ +WEDLV++LQMARKKARESY+E+ELI+A A+TNRLA+L
Sbjct: 1151 AQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAEL 1192
Score = 132 (51.5 bits), Expect = 4.5e-41, Sum P(2) = 4.5e-41
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 4 CTEPATHNALAKIYIDSNNNPERFLK 29
C EPATHNALAKIYIDSNNNPERFL+
Sbjct: 876 CEEPATHNALAKIYIDSNNNPERFLR 901
Score = 38 (18.4 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 11/64 (17%), Positives = 29/64 (45%)
Query: 42 YVLRCNEPGVWSQ--LAKAQLQKGLVKESIDSFI-KADDPSAYMDVVETSHATESWEDLV 98
Y++R +P +W+ L ++ L+ + + + + + DP V+ + +L+
Sbjct: 952 YLVRRKDPELWASVLLEVNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELI 1011
Query: 99 RYLQ 102
L+
Sbjct: 1012 ELLE 1015
>WB|WBGene00011867 [details] [associations]
symbol:chc-1 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0030130 "clathrin
coat of trans-Golgi network vesicle" evidence=IEA] [GO:0030132
"clathrin coat of coated pit" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0030163 "protein catabolic process"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0009898
"internal side of plasma membrane" evidence=IDA] [GO:0031410
"cytoplasmic vesicle" evidence=IDA] [GO:0016324 "apical plasma
membrane" evidence=IDA] [GO:0030139 "endocytic vesicle"
evidence=IDA] [GO:0045334 "clathrin-coated endocytic vesicle"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR000547 InterPro:IPR001473 InterPro:IPR011990
InterPro:IPR015348 InterPro:IPR016024 InterPro:IPR016025
Pfam:PF00637 Pfam:PF09268 SMART:SM00299 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0006915 GO:GO:0006886 GO:GO:0008104
SUPFAM:SSF48371 GO:GO:0002119 GO:GO:0005198 GO:GO:0016324
GO:GO:0000003 Gene3D:1.25.40.10 GO:GO:0030163 GO:GO:0030130
GO:GO:0030132 GO:GO:0009898 EMBL:Z30423 eggNOG:NOG314149
HOGENOM:HOG000188877 KO:K04646 Gene3D:2.130.10.110
InterPro:IPR022365 InterPro:IPR016341 Pfam:PF01394
PIRSF:PIRSF002290 SUPFAM:SSF50989 GeneTree:ENSGT00400000022107
PIR:S42369 RefSeq:NP_499260.1 ProteinModelPortal:P34574 SMR:P34574
DIP:DIP-25251N IntAct:P34574 MINT:MINT-1125840 STRING:P34574
PaxDb:P34574 PRIDE:P34574 EnsemblMetazoa:T20G5.1.1
EnsemblMetazoa:T20G5.1.2 GeneID:176434 KEGG:cel:CELE_T20G5.1
UCSC:T20G5.1 CTD:176434 WormBase:T20G5.1 InParanoid:P34574
OMA:FMETNMV NextBio:892564 GO:GO:0045334 Uniprot:P34574
Length = 1681
Score = 323 (118.8 bits), Expect = 7.5e-37, Sum P(2) = 7.5e-37
Identities = 61/98 (62%), Positives = 78/98 (79%)
Query: 33 VDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKADDPSAYMDVVETSHATE 92
V++L + + +CN+ VW+ LAKAQLQ+ LVKE++DSFIKADDP AYM+VV TE
Sbjct: 1091 VNNLDRAYEFAEKCNQSDVWASLAKAQLQQNLVKEAVDSFIKADDPGAYMEVVNKCSQTE 1150
Query: 93 SWEDLVRYLQMARKKARESYIESELIYAYARTNRLADL 130
WEDLVRYLQMARKK+RESYIE+EL++A A+T RL +L
Sbjct: 1151 HWEDLVRYLQMARKKSRESYIETELVFALAKTGRLTEL 1188
Score = 119 (46.9 bits), Expect = 7.5e-37, Sum P(2) = 7.5e-37
Identities = 22/25 (88%), Positives = 24/25 (96%)
Query: 5 TEPATHNALAKIYIDSNNNPERFLK 29
T+ ATHNA+AKIYIDSNNNPERFLK
Sbjct: 873 TDAATHNAMAKIYIDSNNNPERFLK 897
Score = 45 (20.9 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 24/87 (27%), Positives = 36/87 (41%)
Query: 45 RCNEPGVWSQLAKAQLQKGLVKESIDSFIKADDPSAYMDVVETSHATESWEDLVRYLQMA 104
R N P V +A L LV D + + D+ + M H TESW + + ++
Sbjct: 1344 RVNIPKVLRAAEQAHLWSELVF-LYDKYEEYDNAALTM----MQHPTESWREQ-HFKEVI 1397
Query: 105 RKKAR-ESYIESELIYAYARTNRLADL 130
K A E Y ++ Y + L DL
Sbjct: 1398 AKVANVELYYKAMQFYLDYKPLLLNDL 1424
>UNIPROTKB|J3KR87 [details] [associations]
symbol:CLTCL1 "Clathrin heavy chain 2" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030130
"clathrin coat of trans-Golgi network vesicle" evidence=IEA]
[GO:0030132 "clathrin coat of coated pit" evidence=IEA]
InterPro:IPR000547 InterPro:IPR001473 InterPro:IPR011990
InterPro:IPR015348 InterPro:IPR016024 InterPro:IPR016025
Pfam:PF00637 Pfam:PF09268 SMART:SM00299 GO:GO:0006886
SUPFAM:SSF48371 GO:GO:0016192 GO:GO:0005198 Gene3D:1.25.40.10
GO:GO:0030130 GO:GO:0030132 Gene3D:2.130.10.110 InterPro:IPR022365
InterPro:IPR016341 Pfam:PF01394 PIRSF:PIRSF002290 SUPFAM:SSF50989
HGNC:HGNC:2093 ChiTaRS:CLTCL1 EMBL:AC004463 EMBL:AC000085
EMBL:AC000081 EMBL:AC000094 EMBL:L77569 ProteinModelPortal:J3KR87
Ensembl:ENST00000505027 Uniprot:J3KR87
Length = 1260
Score = 318 (117.0 bits), Expect = 1.1e-36, Sum P(2) = 1.1e-36
Identities = 59/102 (57%), Positives = 85/102 (83%)
Query: 32 LVDH---LSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKADDPSAYMDVVETS 88
L++H L + + RCNEP VWSQLA+AQLQK LVKE+I+S+I+ DDPS+Y++VV+++
Sbjct: 1085 LIEHIGNLDRAYEFAERCNEPAVWSQLAQAQLQKDLVKEAINSYIRGDDPSSYLEVVQSA 1144
Query: 89 HATESWEDLVRYLQMARKKARESYIESELIYAYARTNRLADL 130
+ +WEDLV++LQMARKK RESYIE+ELI+A A+T+R+++L
Sbjct: 1145 SRSNNWEDLVKFLQMARKKGRESYIETELIFALAKTSRVSEL 1186
Score = 119 (46.9 bits), Expect = 1.1e-36, Sum P(2) = 1.1e-36
Identities = 22/26 (84%), Positives = 24/26 (92%)
Query: 4 CTEPATHNALAKIYIDSNNNPERFLK 29
C EPATHNALAKIYIDSNN+PE FL+
Sbjct: 870 CEEPATHNALAKIYIDSNNSPECFLR 895
>UNIPROTKB|P53675 [details] [associations]
symbol:CLTCL1 "Clathrin heavy chain 2" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030130 "clathrin coat of trans-Golgi network vesicle"
evidence=IEA] [GO:0030132 "clathrin coat of coated pit"
evidence=IEA] [GO:0030135 "coated vesicle" evidence=IDA]
[GO:0006898 "receptor-mediated endocytosis" evidence=IDA]
[GO:0005905 "coated pit" evidence=IDA] [GO:0005819 "spindle"
evidence=IDA] [GO:0005802 "trans-Golgi network" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007067 "mitosis"
evidence=IDA] [GO:0030136 "clathrin-coated vesicle" evidence=IDA]
[GO:0046326 "positive regulation of glucose import" evidence=IMP]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0009653
"anatomical structure morphogenesis" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] Reactome:REACT_11123
InterPro:IPR000547 InterPro:IPR001473 InterPro:IPR011990
InterPro:IPR015348 InterPro:IPR016024 InterPro:IPR016025
Pfam:PF00637 Pfam:PF09268 SMART:SM00299 GO:GO:0006898 GO:GO:0006886
SUPFAM:SSF48371 GO:GO:0007067 GO:GO:0005819 GO:GO:0005198
GO:GO:0005905 GO:GO:0030136 GO:GO:0046326 GO:GO:0004871
Gene3D:1.25.40.10 GO:GO:0005802 EMBL:CH471176 GO:GO:0009653
GO:GO:0030130 GO:GO:0030132 eggNOG:NOG314149 HOGENOM:HOG000188877
KO:K04646 Gene3D:2.130.10.110 InterPro:IPR022365 InterPro:IPR016341
Pfam:PF01394 PIRSF:PIRSF002290 SUPFAM:SSF50989 HOVERGEN:HBG005344
OrthoDB:EOG4TXBR0 EMBL:U41763 EMBL:X95486 EMBL:X95487 EMBL:U60802
EMBL:U60803 EMBL:AK302506 IPI:IPI00022881 IPI:IPI00300446
PIR:G02757 PIR:T09522 RefSeq:NP_001826.3 RefSeq:NP_009029.3
UniGene:Hs.368266 ProteinModelPortal:P53675 SMR:P53675
IntAct:P53675 MINT:MINT-208273 STRING:P53675 PhosphoSite:P53675
DMDM:2506298 PaxDb:P53675 PRIDE:P53675 DNASU:8218
Ensembl:ENST00000263200 Ensembl:ENST00000353891
Ensembl:ENST00000427926 GeneID:8218 KEGG:hsa:8218 UCSC:uc011agw.1
UCSC:uc021wld.1 CTD:8218 GeneCards:GC22M019171 H-InvDB:HIX0016234
HGNC:HGNC:2093 HPA:HPA041110 MIM:601273 neXtProt:NX_P53675
PharmGKB:PA26619 InParanoid:P53675 OMA:EPQPIVF PhylomeDB:P53675
ChiTaRS:CLTCL1 GenomeRNAi:8218 NextBio:30943 ArrayExpress:P53675
Bgee:P53675 CleanEx:HS_CLTCL1 Genevestigator:P53675
GermOnline:ENSG00000070371 Uniprot:P53675
Length = 1640
Score = 318 (117.0 bits), Expect = 2.4e-36, Sum P(2) = 2.4e-36
Identities = 59/102 (57%), Positives = 85/102 (83%)
Query: 32 LVDH---LSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKADDPSAYMDVVETS 88
L++H L + + RCNEP VWSQLA+AQLQK LVKE+I+S+I+ DDPS+Y++VV+++
Sbjct: 1085 LIEHIGNLDRAYEFAERCNEPAVWSQLAQAQLQKDLVKEAINSYIRGDDPSSYLEVVQSA 1144
Query: 89 HATESWEDLVRYLQMARKKARESYIESELIYAYARTNRLADL 130
+ +WEDLV++LQMARKK RESYIE+ELI+A A+T+R+++L
Sbjct: 1145 SRSNNWEDLVKFLQMARKKGRESYIETELIFALAKTSRVSEL 1186
Score = 119 (46.9 bits), Expect = 2.4e-36, Sum P(2) = 2.4e-36
Identities = 22/26 (84%), Positives = 24/26 (92%)
Query: 4 CTEPATHNALAKIYIDSNNNPERFLK 29
C EPATHNALAKIYIDSNN+PE FL+
Sbjct: 870 CEEPATHNALAKIYIDSNNSPECFLR 895
Score = 41 (19.5 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 32 LVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKADDPSAYMDVVETSHAT 91
+++HL + R N P V +A L LV D + + D+ A + ++ SH T
Sbjct: 1332 MLEHLE---LFWSRVNIPKVLRAAEQAHLWAELVF-LYDKYEEYDN--AVLTMM--SHPT 1383
Query: 92 ESWED 96
E+W++
Sbjct: 1384 EAWKE 1388
>UNIPROTKB|F1P3J0 [details] [associations]
symbol:CLTC "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030136 "clathrin-coated vesicle"
evidence=IEA] [GO:0031623 "receptor internalization" evidence=IEA]
[GO:0033572 "transferrin transport" evidence=IEA]
InterPro:IPR000547 InterPro:IPR011990 InterPro:IPR016024
Pfam:PF00637 SMART:SM00299 GO:GO:0005739 GO:GO:0006886
SUPFAM:SSF48371 GO:GO:0007067 GO:GO:0030117 GO:GO:0005819
GO:GO:0030136 GO:GO:0031623 Gene3D:1.25.40.10 GO:GO:0033572
GeneTree:ENSGT00400000022107 EMBL:AADN02025786 IPI:IPI00581486
Ensembl:ENSGALT00000034887 Uniprot:F1P3J0
Length = 375
Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
Identities = 68/102 (66%), Positives = 89/102 (87%)
Query: 32 LVDH---LSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKADDPSAYMDVVETS 88
L++H L + + RCNEP VWSQLAKAQLQKG+VKE+IDS+IKADDPS+YM+VV+ +
Sbjct: 153 LIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEVVQAA 212
Query: 89 HATESWEDLVRYLQMARKKARESYIESELIYAYARTNRLADL 130
+A+ +WE+LV+YLQMARKKARESY+E+ELI+A A+TNRLA+L
Sbjct: 213 NASGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAEL 254
>UNIPROTKB|F1NYC4 [details] [associations]
symbol:CLTCL1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0030130 "clathrin coat of trans-Golgi network
vesicle" evidence=IEA] [GO:0030132 "clathrin coat of coated pit"
evidence=IEA] [GO:0005802 "trans-Golgi network" evidence=IEA]
[GO:0005819 "spindle" evidence=IEA] [GO:0006898 "receptor-mediated
endocytosis" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0046326 "positive regulation of glucose import" evidence=IEA]
InterPro:IPR000547 InterPro:IPR001473 InterPro:IPR011990
InterPro:IPR015348 InterPro:IPR016024 InterPro:IPR016025
Pfam:PF00637 Pfam:PF09268 SMART:SM00299 GO:GO:0006898 GO:GO:0006886
SUPFAM:SSF48371 GO:GO:0007067 GO:GO:0005819 GO:GO:0005198
GO:GO:0046326 Gene3D:1.25.40.10 GO:GO:0005802 GO:GO:0030130
GO:GO:0030132 OMA:MAIRSNL Gene3D:2.130.10.110 InterPro:IPR022365
InterPro:IPR016341 Pfam:PF01394 PIRSF:PIRSF002290 SUPFAM:SSF50989
GeneTree:ENSGT00400000022107 EMBL:AADN02034751 IPI:IPI00683666
Ensembl:ENSGALT00000001983 ArrayExpress:F1NYC4 Uniprot:F1NYC4
Length = 1681
Score = 354 (129.7 bits), Expect = 8.2e-31, P = 8.2e-31
Identities = 66/102 (64%), Positives = 88/102 (86%)
Query: 32 LVDH---LSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKADDPSAYMDVVETS 88
L++H L + + RCNEP VWSQLA+AQLQK LVKE+IDS+IKADDPSAYM+VV+ +
Sbjct: 1094 LIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQKDLVKEAIDSYIKADDPSAYMEVVQAA 1153
Query: 89 HATESWEDLVRYLQMARKKARESYIESELIYAYARTNRLADL 130
+ ++WEDLV++LQMARKKARESY+E+ELI+A+A+TNRL++L
Sbjct: 1154 NRNDNWEDLVKFLQMARKKARESYVETELIFAFAKTNRLSEL 1195
Score = 136 (52.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 36/95 (37%), Positives = 50/95 (52%)
Query: 4 CTEPATHNALAKIYIDSNNNPERFLK---FF---LVDHL--SKTPFYVLRCNEPGVWS-Q 54
C EPATHNALAKIYIDSNNNPERFL+ ++ +V + P E G +
Sbjct: 879 CEEPATHNALAKIYIDSNNNPERFLRENPYYDSRVVGKYCEKRDPHLACVAYERGQCDLE 938
Query: 55 LAKAQLQKGLVKESIDSFIKADDPSAYMDVVETSH 89
L K + L K ++ DP + +V+E ++
Sbjct: 939 LIKVCNENSLFKSEARYLVRRKDPELWANVLEENN 973
>UNIPROTKB|F1PGV0 [details] [associations]
symbol:CLTCL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030132 "clathrin coat of coated pit"
evidence=IEA] [GO:0030130 "clathrin coat of trans-Golgi network
vesicle" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR000547 InterPro:IPR001473
InterPro:IPR011990 InterPro:IPR015348 InterPro:IPR016024
InterPro:IPR016025 Pfam:PF00637 Pfam:PF09268 SMART:SM00299
GO:GO:0006886 SUPFAM:SSF48371 GO:GO:0016192 GO:GO:0005198
Gene3D:1.25.40.10 GO:GO:0030130 GO:GO:0030132 OMA:MAIRSNL
Gene3D:2.130.10.110 InterPro:IPR022365 InterPro:IPR016341
Pfam:PF01394 PIRSF:PIRSF002290 SUPFAM:SSF50989
GeneTree:ENSGT00400000022107 EMBL:AAEX03014874 EMBL:AAEX03014869
EMBL:AAEX03014870 EMBL:AAEX03014871 EMBL:AAEX03014872
EMBL:AAEX03014873 Ensembl:ENSCAFT00000023485 Uniprot:F1PGV0
Length = 1640
Score = 332 (121.9 bits), Expect = 1.7e-28, P = 1.7e-28
Identities = 62/102 (60%), Positives = 85/102 (83%)
Query: 32 LVDH---LSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKADDPSAYMDVVETS 88
L++H L + + RCNEP VWSQLA+AQLQK LVKESIDS+I+ADDPS+Y++VV+ +
Sbjct: 1085 LIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQKDLVKESIDSYIRADDPSSYLEVVQAA 1144
Query: 89 HATESWEDLVRYLQMARKKARESYIESELIYAYARTNRLADL 130
+ +WEDLV++LQMARKK RESY+E+ELI+A A+T+RL++L
Sbjct: 1145 SKSNNWEDLVKFLQMARKKGRESYVETELIFALAKTSRLSEL 1186
Score = 130 (50.8 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 35/95 (36%), Positives = 49/95 (51%)
Query: 4 CTEPATHNALAKIYIDSNNNPERFLK---FF---LVDHL--SKTPFYVLRCNEPGVWS-Q 54
C EPATHNALAKIYIDSNN+PERFL+ ++ +V + P E G +
Sbjct: 870 CEEPATHNALAKIYIDSNNSPERFLRENAYYDSRVVGRYCEKRDPHLACVAYERGQCDLE 929
Query: 55 LAKAQLQKGLVKESIDSFIKADDPSAYMDVVETSH 89
L K + L K ++ DP + V+E ++
Sbjct: 930 LIKVCNENSLFKSEARYLVRRKDPELWAHVLEETN 964
>DICTYBASE|DDB_G0277221 [details] [associations]
symbol:chcA "clathrin heavy chain" species:44689
"Dictyostelium discoideum" [GO:0005515 "protein binding"
evidence=IPI] [GO:0048268 "clathrin coat assembly" evidence=IMP]
[GO:0006970 "response to osmotic stress" evidence=IMP] [GO:0006907
"pinocytosis" evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP]
[GO:0031152 "aggregation involved in sorocarp development"
evidence=IMP] [GO:0030435 "sporulation resulting in formation of a
cellular spore" evidence=IMP] [GO:0000915 "cytokinesis, actomyosin
contractile ring assembly" evidence=IMP] [GO:0071439 "clathrin
complex" evidence=IDA] [GO:0030118 "clathrin coat" evidence=IDA]
[GO:0007041 "lysosomal transport" evidence=IMP] [GO:0006909
"phagocytosis" evidence=IMP] [GO:0007033 "vacuole organization"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0030132 "clathrin coat of coated pit"
evidence=IEA] [GO:0030130 "clathrin coat of trans-Golgi network
vesicle" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005905 "coated pit"
evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000547 InterPro:IPR001473 InterPro:IPR011990
InterPro:IPR015348 InterPro:IPR016024 InterPro:IPR016025
Pfam:PF00637 Pfam:PF09268 SMART:SM00299 dictyBase:DDB_G0277221
GO:GO:0006898 GO:GO:0006886 SUPFAM:SSF48371 GO:GO:0005198
GenomeReviews:CM000151_GR GO:GO:0071439 GO:GO:0030435 GO:GO:0006970
Gene3D:1.25.40.10 GO:GO:0000915 EMBL:AAFI02000019 GO:GO:0007033
GO:GO:0048268 GO:GO:0007041 GO:GO:0030130 GO:GO:0030132
GO:GO:0006907 GO:GO:0031152 eggNOG:NOG314149 KO:K04646
Gene3D:2.130.10.110 InterPro:IPR022365 InterPro:IPR016341
Pfam:PF01394 PIRSF:PIRSF002290 SUPFAM:SSF50989 OMA:FTNYDRA
EMBL:M83660 RefSeq:XP_642717.1 ProteinModelPortal:P25870 SMR:P25870
IntAct:P25870 STRING:P25870 PRIDE:P25870 EnsemblProtists:DDB0185029
GeneID:8620910 KEGG:ddi:DDB_G0277221 ProtClustDB:CLSZ2729138
Uniprot:P25870
Length = 1694
Score = 232 (86.7 bits), Expect = 1.2e-25, Sum P(2) = 1.2e-25
Identities = 45/86 (52%), Positives = 64/86 (74%)
Query: 45 RCNEPGVWSQLAKAQLQKGLVKESIDSFIKADDPSAYMDVVETSHATESWEDLVRYLQMA 104
RCN+ V+S+L AQL+ +VKE I+SFIKA+D Y +VV + + +EDLV++LQM
Sbjct: 1102 RCNQTEVYSKLGVAQLKAEMVKECIESFIKANDTEHYQEVVAAAERKDEYEDLVKFLQMC 1161
Query: 105 RKKARESYIESELIYAYARTNRLADL 130
RKK +E IESELI+AYA+ N+LA++
Sbjct: 1162 RKKIKEPAIESELIFAYAKVNKLAEM 1187
Score = 104 (41.7 bits), Expect = 1.2e-25, Sum P(2) = 1.2e-25
Identities = 20/23 (86%), Positives = 20/23 (86%)
Query: 6 EPATHNALAKIYIDSNNNPERFL 28
EPA HNALAKIYIDSN NPE FL
Sbjct: 873 EPAIHNALAKIYIDSNKNPEAFL 895
Score = 36 (17.7 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 17 YIDSNNNPERFLKFFLVDHLSKTPFYVLRCNEP 49
YID+N E F ++ S F +L + P
Sbjct: 543 YIDANQVVELFSARNMIQETSNFLFAILDGDRP 575
Score = 34 (17.0 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 7/28 (25%), Positives = 15/28 (53%)
Query: 52 WSQLAKAQLQKGLVKESIDSFIKADDPS 79
W+Q + + L K++I S + +P+
Sbjct: 1522 WAQSVELSKKDKLYKDAIQSASDSKNPA 1549
>TAIR|locus:2074733 [details] [associations]
symbol:AT3G11130 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA;ISS]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030130
"clathrin coat of trans-Golgi network vesicle" evidence=IEA]
[GO:0030132 "clathrin coat of coated pit" evidence=IEA] [GO:0005773
"vacuole" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0006897 "endocytosis"
evidence=IMP] [GO:0005794 "Golgi apparatus" evidence=IDA]
InterPro:IPR000547 InterPro:IPR001473 InterPro:IPR011990
InterPro:IPR015348 InterPro:IPR016024 InterPro:IPR016025
Pfam:PF00637 Pfam:PF09268 SMART:SM00299 GO:GO:0005886 GO:GO:0009506
GO:GO:0005794 GO:GO:0005774 EMBL:CP002686 GO:GO:0006886
SUPFAM:SSF48371 GO:GO:0005198 GO:GO:0006897 Gene3D:1.25.40.10
EMBL:AC009991 EMBL:AC073395 GO:GO:0030130 GO:GO:0030132
EMBL:AK229443 EMBL:AK229949 IPI:IPI00527690 RefSeq:NP_187724.2
UniGene:At.17332 UniGene:At.26828 HSSP:P11442
ProteinModelPortal:Q0WNJ6 SMR:Q0WNJ6 IntAct:Q0WNJ6 STRING:Q0WNJ6
PRIDE:Q0WNJ6 EnsemblPlants:AT3G11130.1 GeneID:820284
KEGG:ath:AT3G11130 TAIR:At3g11130 eggNOG:NOG314149
HOGENOM:HOG000188877 InParanoid:Q0WNJ6 KO:K04646 OMA:MAIRSNL
PhylomeDB:Q0WNJ6 ProtClustDB:CLSN2690853 Genevestigator:Q0WNJ6
Gene3D:2.130.10.110 InterPro:IPR022365 InterPro:IPR016341
Pfam:PF01394 PIRSF:PIRSF002290 SUPFAM:SSF50989 Uniprot:Q0WNJ6
Length = 1705
Score = 243 (90.6 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
Identities = 44/89 (49%), Positives = 66/89 (74%)
Query: 42 YVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKADDPSAYMDVVETSHATESWEDLVRYL 101
+ R E VWSQ+AKAQL++GLV ++I+SFI+ADD + +++V+ S T ++DLVRYL
Sbjct: 1112 FAFRVEEDAVWSQVAKAQLREGLVSDAIESFIRADDTTQFLEVIRASEDTNVYDDLVRYL 1171
Query: 102 QMARKKARESYIESELIYAYARTNRLADL 130
M R+K +E ++SELIYAYA+ RL ++
Sbjct: 1172 LMVRQKVKEPKVDSELIYAYAKIERLGEI 1200
Score = 84 (34.6 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
Identities = 16/19 (84%), Positives = 16/19 (84%)
Query: 10 HNALAKIYIDSNNNPERFL 28
HNAL KI IDSNNNPE FL
Sbjct: 890 HNALGKIIIDSNNNPEHFL 908
>TAIR|locus:2103442 [details] [associations]
symbol:AT3G08530 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA;ISS]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030130
"clathrin coat of trans-Golgi network vesicle" evidence=IEA]
[GO:0030132 "clathrin coat of coated pit" evidence=IEA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0006897 "endocytosis"
evidence=IMP] [GO:0005794 "Golgi apparatus" evidence=IDA]
InterPro:IPR000547 InterPro:IPR001473 InterPro:IPR011990
InterPro:IPR015348 InterPro:IPR016024 InterPro:IPR016025
Pfam:PF00637 Pfam:PF09268 SMART:SM00299 GO:GO:0005829 GO:GO:0005886
GO:GO:0009506 GO:GO:0005794 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006886 SUPFAM:SSF48371
GO:GO:0005198 GO:GO:0006897 Gene3D:1.25.40.10 EMBL:AC012562
GO:GO:0030130 GO:GO:0030132 EMBL:AC074395 UniGene:At.17332
UniGene:At.26828 eggNOG:NOG314149 HOGENOM:HOG000188877 KO:K04646
ProtClustDB:CLSN2690853 Gene3D:2.130.10.110 InterPro:IPR022365
InterPro:IPR016341 Pfam:PF01394 PIRSF:PIRSF002290 SUPFAM:SSF50989
EMBL:AK230290 EMBL:AY094397 EMBL:AY125528 IPI:IPI00544808
RefSeq:NP_187466.4 HSSP:P49951 ProteinModelPortal:Q0WLB5 SMR:Q0WLB5
DIP:DIP-59590N IntAct:Q0WLB5 STRING:Q0WLB5 PaxDb:Q0WLB5
PRIDE:Q0WLB5 EnsemblPlants:AT3G08530.1 GeneID:820001
KEGG:ath:AT3G08530 TAIR:At3g08530 InParanoid:Q0WLB5 OMA:FTNYDRA
PhylomeDB:Q0WLB5 Genevestigator:Q0WLB5 Uniprot:Q0WLB5
Length = 1703
Score = 242 (90.2 bits), Expect = 1.3e-24, Sum P(2) = 1.3e-24
Identities = 43/89 (48%), Positives = 68/89 (76%)
Query: 42 YVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKADDPSAYMDVVETSHATESWEDLVRYL 101
+ R E VWSQ+AKAQL++GLV ++I+SFI+ADD + +++V+ S T+ ++DLV+YL
Sbjct: 1112 FAFRVEEDSVWSQVAKAQLREGLVSDAIESFIRADDATHFLEVIRVSEDTDVYDDLVKYL 1171
Query: 102 QMARKKARESYIESELIYAYARTNRLADL 130
M R+K +E ++SELIYAYA+ +RL ++
Sbjct: 1172 LMVRQKVKEPKVDSELIYAYAKIDRLGEI 1200
Score = 84 (34.6 bits), Expect = 1.3e-24, Sum P(2) = 1.3e-24
Identities = 16/19 (84%), Positives = 16/19 (84%)
Query: 10 HNALAKIYIDSNNNPERFL 28
HNAL KI IDSNNNPE FL
Sbjct: 890 HNALGKIIIDSNNNPEHFL 908
>ASPGD|ASPL0000070963 [details] [associations]
symbol:AN4463 species:162425 "Emericella nidulans"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] [GO:0030130 "clathrin coat of
trans-Golgi network vesicle" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030132 "clathrin
coat of coated pit" evidence=IEA] InterPro:IPR000547
InterPro:IPR001473 InterPro:IPR011990 InterPro:IPR016024
InterPro:IPR016025 Pfam:PF00637 SMART:SM00299 GO:GO:0006886
SUPFAM:SSF48371 GO:GO:0005198 GO:GO:0006897 Gene3D:1.25.40.10
EMBL:BN001303 GO:GO:0030130 GO:GO:0030132 eggNOG:NOG314149
HOGENOM:HOG000188877 KO:K04646 Gene3D:2.130.10.110
InterPro:IPR022365 InterPro:IPR016341 Pfam:PF01394
PIRSF:PIRSF002290 SUPFAM:SSF50989 OrthoDB:EOG4DFSWK
EMBL:AACD01000077 RefSeq:XP_662067.1 ProteinModelPortal:Q5B4R7
SMR:Q5B4R7 STRING:Q5B4R7 EnsemblFungi:CADANIAT00005989
GeneID:2872262 KEGG:ani:AN4463.2 OMA:SAYMEVG Uniprot:Q5B4R7
Length = 1676
Score = 206 (77.6 bits), Expect = 1.0e-22, Sum P(2) = 1.0e-22
Identities = 45/87 (51%), Positives = 63/87 (72%)
Query: 45 RCNEPGVWSQLAKAQLQKGLVKESIDSFIKADDPSAYMDVVETS-HATESWEDLVRYLQM 103
R P VWS++AKAQL V +SI+S+I A+DPS Y +V+ET+ HA + EDLV+YL+M
Sbjct: 1105 RVELPDVWSKVAKAQLDGLRVSDSIESYIHANDPSNYNEVIETATHAGKD-EDLVKYLKM 1163
Query: 104 ARKKARESYIESELIYAYARTNRLADL 130
ARK RE I++ L + YAR ++LA+L
Sbjct: 1164 ARKTLREPAIDTALAFCYARLDQLAEL 1190
Score = 102 (41.0 bits), Expect = 1.0e-22, Sum P(2) = 1.0e-22
Identities = 19/24 (79%), Positives = 22/24 (91%)
Query: 6 EPATHNALAKIYIDSNNNPERFLK 29
+ A +NALAKIYIDSNNNPE+FLK
Sbjct: 876 QQAVYNALAKIYIDSNNNPEKFLK 899
Score = 35 (17.4 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 6/22 (27%), Positives = 15/22 (68%)
Query: 65 VKESIDSFIKADDPSAYMDVVE 86
V ++ +F++AD P ++++E
Sbjct: 992 VSVAVKAFLEADLPGDLIELLE 1013
>UNIPROTKB|G4N0Z8 [details] [associations]
symbol:MGG_07768 "Clathrin heavy chain" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000547 InterPro:IPR001473
InterPro:IPR011990 InterPro:IPR015348 InterPro:IPR016024
InterPro:IPR016025 Pfam:PF00637 Pfam:PF09268 SMART:SM00299
GO:GO:0006886 SUPFAM:SSF48371 EMBL:CM001233 GO:GO:0005198
GO:GO:0006897 Gene3D:1.25.40.10 GO:GO:0030130 GO:GO:0030132
KO:K04646 Gene3D:2.130.10.110 InterPro:IPR022365 InterPro:IPR016341
Pfam:PF01394 PIRSF:PIRSF002290 SUPFAM:SSF50989 Gene3D:1.25.40.30
InterPro:IPR012331 RefSeq:XP_003712981.1 ProteinModelPortal:G4N0Z8
SMR:G4N0Z8 EnsemblFungi:MGG_07768T0 GeneID:2683695
KEGG:mgr:MGG_07768 Uniprot:G4N0Z8
Length = 1680
Score = 205 (77.2 bits), Expect = 2.7e-22, Sum P(2) = 2.7e-22
Identities = 42/83 (50%), Positives = 64/83 (77%)
Query: 49 PGVWSQLAKAQLQKGLVKESIDSFIKADDPSAYMDVVE-TSHATESWEDLVRYLQMARKK 107
P VWS++AKAQL V +SI+S+IKA+DP Y++V+E +HA ++ EDLV+YL+MARK
Sbjct: 1113 PEVWSKVAKAQLDGLRVTDSIESYIKAEDPKNYLEVIEIATHAGKN-EDLVKYLRMARKT 1171
Query: 108 ARESYIESELIYAYARTNRLADL 130
RE+ I++ L + YAR ++L++L
Sbjct: 1172 LRETAIDTALAFCYARLDQLSEL 1194
Score = 99 (39.9 bits), Expect = 2.7e-22, Sum P(2) = 2.7e-22
Identities = 19/24 (79%), Positives = 21/24 (87%)
Query: 6 EPATHNALAKIYIDSNNNPERFLK 29
+ A NALAKIYIDSNNNPE+FLK
Sbjct: 880 QQAVFNALAKIYIDSNNNPEKFLK 903
Score = 47 (21.6 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 28/113 (24%), Positives = 50/113 (44%)
Query: 20 SNNNPERFLKFFLVDHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKADD-P 78
S +PER L++HL+ + R N P ++ +A + L E + ++ D+
Sbjct: 1333 SKYHPER-----LIEHLN---LFWSRMNLP----KMIRACEEANLWPELVFCYVHYDEFD 1380
Query: 79 SAYMDVVETSHATESWEDLVRYLQMARKKAR-ESYIESELIYAYARTNRLADL 130
+A + V+E SWE ++ + K A E Y ++ Y + L DL
Sbjct: 1381 NAALSVIERPE--NSWEH-TQFRDIIVKVANLEIYFKAINFYLEQHPSLLTDL 1430
Score = 38 (18.4 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 63 GLVKESIDSFIKADDPSAYMDVV 85
GL +E+ + F K DD + ++V+
Sbjct: 1071 GLYEEAFEIFKKIDDKVSAVNVL 1093
Score = 34 (17.0 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 52 WSQLAKAQLQKGLVKESIDSFIKADDPSAYMDVVE 86
W++LA + G + +++ KA+ + +V E
Sbjct: 1232 WAKLATTLVHLGDYQAAVECARKANSIKVWKEVHE 1266
>GENEDB_PFALCIPARUM|PFL0930w [details] [associations]
symbol:PFL0930w "clathrin heavy chain, putative"
species:5833 "Plasmodium falciparum" [GO:0008565 "protein
transporter activity" evidence=ISS] [GO:0006898 "receptor-mediated
endocytosis" evidence=ISS] InterPro:IPR000547 InterPro:IPR001473
InterPro:IPR011990 InterPro:IPR016024 InterPro:IPR016025
Pfam:PF00637 SMART:SM00299 GO:GO:0006898 GO:GO:0006886
SUPFAM:SSF48371 GO:GO:0005198 GO:GO:0008565 Gene3D:1.25.40.10
EMBL:AE014188 GO:GO:0030130 GO:GO:0030132 HOGENOM:HOG000188877
KO:K04646 Gene3D:2.130.10.110 InterPro:IPR022365 InterPro:IPR016341
Pfam:PF01394 PIRSF:PIRSF002290 SUPFAM:SSF50989 HSSP:P49951
OMA:FTNYDRA Gene3D:1.25.40.30 InterPro:IPR012331
RefSeq:XP_001350594.1 ProteinModelPortal:Q8I5L6 PRIDE:Q8I5L6
EnsemblProtists:PFL0930w:mRNA GeneID:811238 KEGG:pfa:PFL0930w
EuPathDB:PlasmoDB:PF3D7_1219100 ProtClustDB:CLSZ2433298
Uniprot:Q8I5L6
Length = 1997
Score = 175 (66.7 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 34/99 (34%), Positives = 60/99 (60%)
Query: 34 DHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKADDPSAYMDVVETSHATES 93
D L++ + +CN VW L KAQL+ + +SIDSF+K+++P AY +V+E
Sbjct: 1409 DDLNRAIEFAQKCNNNDVWFILGKAQLKLNKIIDSIDSFVKSNNPEAYKEVIEKCKENNF 1468
Query: 94 WEDLVRYLQMARKK--ARESYIESELIYAYARTNRLADL 130
+E L+ YL R++ ++ ++SEL+YAYA+ + ++
Sbjct: 1469 YEHLITYLNTLREQNSLKDVLVDSELLYAYAKLKKTNEM 1507
Score = 84 (34.6 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 16/20 (80%), Positives = 17/20 (85%)
Query: 10 HNALAKIYIDSNNNPERFLK 29
HNALAKIYID N +PE FLK
Sbjct: 1081 HNALAKIYIDLNKDPENFLK 1100
>UNIPROTKB|Q8I5L6 [details] [associations]
symbol:PFL0930w "Clathrin heavy chain, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0006898
"receptor-mediated endocytosis" evidence=ISS] [GO:0008565 "protein
transporter activity" evidence=ISS] InterPro:IPR000547
InterPro:IPR001473 InterPro:IPR011990 InterPro:IPR016024
InterPro:IPR016025 Pfam:PF00637 SMART:SM00299 GO:GO:0006898
GO:GO:0006886 SUPFAM:SSF48371 GO:GO:0005198 GO:GO:0008565
Gene3D:1.25.40.10 EMBL:AE014188 GO:GO:0030130 GO:GO:0030132
HOGENOM:HOG000188877 KO:K04646 Gene3D:2.130.10.110
InterPro:IPR022365 InterPro:IPR016341 Pfam:PF01394
PIRSF:PIRSF002290 SUPFAM:SSF50989 HSSP:P49951 OMA:FTNYDRA
Gene3D:1.25.40.30 InterPro:IPR012331 RefSeq:XP_001350594.1
ProteinModelPortal:Q8I5L6 PRIDE:Q8I5L6
EnsemblProtists:PFL0930w:mRNA GeneID:811238 KEGG:pfa:PFL0930w
EuPathDB:PlasmoDB:PF3D7_1219100 ProtClustDB:CLSZ2433298
Uniprot:Q8I5L6
Length = 1997
Score = 175 (66.7 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 34/99 (34%), Positives = 60/99 (60%)
Query: 34 DHLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSFIKADDPSAYMDVVETSHATES 93
D L++ + +CN VW L KAQL+ + +SIDSF+K+++P AY +V+E
Sbjct: 1409 DDLNRAIEFAQKCNNNDVWFILGKAQLKLNKIIDSIDSFVKSNNPEAYKEVIEKCKENNF 1468
Query: 94 WEDLVRYLQMARKK--ARESYIESELIYAYARTNRLADL 130
+E L+ YL R++ ++ ++SEL+YAYA+ + ++
Sbjct: 1469 YEHLITYLNTLREQNSLKDVLVDSELLYAYAKLKKTNEM 1507
Score = 84 (34.6 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 16/20 (80%), Positives = 17/20 (85%)
Query: 10 HNALAKIYIDSNNNPERFLK 29
HNALAKIYID N +PE FLK
Sbjct: 1081 HNALAKIYIDLNKDPENFLK 1100
>POMBASE|SPAC26A3.05 [details] [associations]
symbol:chc1 "clathrin heavy chain Chc1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005198 "structural
molecule activity" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006886 "intracellular protein transport"
evidence=IC] [GO:0006897 "endocytosis" evidence=ISO] [GO:0016192
"vesicle-mediated transport" evidence=ISO] [GO:0030125 "clathrin
vesicle coat" evidence=ISO] [GO:0030130 "clathrin coat of
trans-Golgi network vesicle" evidence=IEA] [GO:0030132 "clathrin
coat of coated pit" evidence=IEA] InterPro:IPR000547
InterPro:IPR001473 InterPro:IPR011990 InterPro:IPR015348
InterPro:IPR016024 InterPro:IPR016025 Pfam:PF00637 Pfam:PF09268
SMART:SM00299 PomBase:SPAC26A3.05 GO:GO:0006886 EMBL:CU329670
SUPFAM:SSF48371 GenomeReviews:CU329670_GR GO:GO:0005198
GO:GO:0006897 Gene3D:1.25.40.10 GO:GO:0030130 GO:GO:0030132
GO:GO:0030125 eggNOG:NOG314149 HOGENOM:HOG000188877 KO:K04646
Gene3D:2.130.10.110 InterPro:IPR022365 InterPro:IPR016341
Pfam:PF01394 PIRSF:PIRSF002290 SUPFAM:SSF50989 OMA:VWSRLAK
PIR:T38393 RefSeq:NP_594148.1 ProteinModelPortal:Q10161 SMR:Q10161
STRING:Q10161 EnsemblFungi:SPAC26A3.05.1 GeneID:2542078
KEGG:spo:SPAC26A3.05 OrthoDB:EOG4DFSWK NextBio:20803151
Uniprot:Q10161
Length = 1666
Score = 220 (82.5 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 46/118 (38%), Positives = 74/118 (62%)
Query: 15 KIYIDSNNNPERFLKFFLVD--HLSKTPFYVLRCNEPGVWSQLAKAQLQKGLVKESIDSF 72
+IY +N E+ +K + D L + Y +P VWS+LAKAQL + ++I+S+
Sbjct: 1066 RIY-KIHNKHEQAMKVLVEDIVSLDRAQDYAETVEQPEVWSRLAKAQLDGIRIPDAIESY 1124
Query: 73 IKADDPSAYMDVVETSHATESWEDLVRYLQMARKKARESYIESELIYAYARTNRLADL 130
+KADDPS Y +V+E + +E+L++YL MAR K E ++S L+ AYA+TN+L ++
Sbjct: 1125 LKADDPSNYSEVIELASRAGKYEELIKYLLMARSKMHEPDVDSALLIAYAKTNQLTEM 1182
>SGD|S000003174 [details] [associations]
symbol:CHC1 "Clathrin heavy chain" species:4932
"Saccharomyces cerevisiae" [GO:0016192 "vesicle-mediated transport"
evidence=IEA;TAS] [GO:0030132 "clathrin coat of coated pit"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA;TAS] [GO:0005905 "coated pit" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0006897 "endocytosis" evidence=IMP;IDA]
[GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030130 "clathrin coat of trans-Golgi network vesicle"
evidence=IEA] [GO:0030125 "clathrin vesicle coat" evidence=TAS]
InterPro:IPR000547 InterPro:IPR001473 InterPro:IPR011990
InterPro:IPR015348 InterPro:IPR016024 InterPro:IPR016025
Pfam:PF00637 Pfam:PF09268 SMART:SM00299 SGD:S000003174
GO:GO:0006886 SUPFAM:SSF48371 EMBL:BK006941 GO:GO:0005198
GO:GO:0006897 Gene3D:1.25.40.10 GO:GO:0030130 GO:GO:0030132
GO:GO:0030125 eggNOG:NOG314149 HOGENOM:HOG000188877 KO:K04646
Gene3D:2.130.10.110 InterPro:IPR022365 InterPro:IPR016341
Pfam:PF01394 PIRSF:PIRSF002290 SUPFAM:SSF50989 OMA:FTNYDRA
GeneTree:ENSGT00400000022107 OrthoDB:EOG4DFSWK EMBL:X52900
EMBL:Z72728 PIR:A36349 RefSeq:NP_011309.1 ProteinModelPortal:P22137
DIP:DIP-2279N IntAct:P22137 MINT:MINT-372536 STRING:P22137
PaxDb:P22137 PeptideAtlas:P22137 PRIDE:P22137 EnsemblFungi:YGL206C
GeneID:852666 KEGG:sce:YGL206C CYGD:YGL206c NextBio:971960
Genevestigator:P22137 GermOnline:YGL206C Uniprot:P22137
Length = 1653
Score = 190 (71.9 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 43/129 (33%), Positives = 72/129 (55%)
Query: 4 CTEPATHNALAKIYIDSNNNPERFLKFFLVDHLS--KTPFYVLRCNEPGVWSQLAKAQLQ 61
C E +IY D + + LK + D +S + Y + N P +WSQ+ AQL
Sbjct: 1065 CIEHDLKEEAFEIY-DKHEMYGKALKVLIEDIMSLDRAASYADKINTPELWSQIGTAQLD 1123
Query: 62 KGLVKESIDSFIKADDPSAYMDVVETSHATESWEDLVRYLQMARKKARESYIESELIYAY 121
+ ++I+S+IKA+DPS Y +V++ + +E+L+ +L MARK +E I+ LI AY
Sbjct: 1124 GLRIPDAIESYIKAEDPSNYENVIDIAEQAGKYEELIPFLLMARKTLKEPKIDGALILAY 1183
Query: 122 ARTNRLADL 130
A N++ ++
Sbjct: 1184 AELNKIHEI 1192
Score = 97 (39.2 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 18/24 (75%), Positives = 22/24 (91%)
Query: 6 EPATHNALAKIYIDSNNNPERFLK 29
+ A +NALAKIYIDSNN+PE+FLK
Sbjct: 878 DQAVYNALAKIYIDSNNSPEKFLK 901
Score = 35 (17.4 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 12/62 (19%), Positives = 26/62 (41%)
Query: 52 WSQLAKAQLQKGLVKESIDSFIKADDPSAYMDVVETSHATESWEDLVRYLQMARKKARES 111
W++ ++ L K++I++ + DP ++ T + E V L A R
Sbjct: 1527 WAKSLSILKEEKLWKDAIETAAISQDPKVVEALLTYFVETGNREGFVALLYAAYNLVRIE 1586
Query: 112 YI 113
++
Sbjct: 1587 FV 1588
Score = 34 (17.0 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 5/17 (29%), Positives = 12/17 (70%)
Query: 106 KKARESYIESELIYAYA 122
+ ++++ SEL++ YA
Sbjct: 1356 RAVEQAHLWSELVFLYA 1372
>CGD|CAL0005122 [details] [associations]
symbol:orf19.3496 species:5476 "Candida albicans" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA]
InterPro:IPR000547 InterPro:IPR001473 InterPro:IPR011990
InterPro:IPR016024 InterPro:IPR016025 Pfam:PF00637 SMART:SM00299
CGD:CAL0005122 GO:GO:0006886 SUPFAM:SSF48371 GO:GO:0016192
GO:GO:0005198 Gene3D:1.25.40.10 GO:GO:0030130 GO:GO:0030132
eggNOG:NOG314149 HOGENOM:HOG000188877 KO:K04646 Gene3D:2.130.10.110
InterPro:IPR016341 PIRSF:PIRSF002290 SUPFAM:SSF50989
EMBL:AACQ01000234 EMBL:AACQ01000233 RefSeq:XP_710822.1
RefSeq:XP_710836.1 ProteinModelPortal:Q59M82 SMR:Q59M82
STRING:Q59M82 GeneID:3647552 GeneID:3647566 KEGG:cal:CaO19.10990
KEGG:cal:CaO19.3496 Uniprot:Q59M82
Length = 1671
Score = 164 (62.8 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 42/134 (31%), Positives = 69/134 (51%)
Query: 11 NALAKIYIDSNNNPERF------------LKFFLVD--HLSKTPFYVLRCNEPGVWSQLA 56
N +A + ID+ N E F +K + D L + Y + + P +W QL
Sbjct: 1055 NEIAPLCIDNGLNEEAFEVYDKFELRSEAMKVLVEDIVSLDRAEQYAEKYDTPELWYQLG 1114
Query: 57 KAQLQKGLVKESIDSFIKADDPSAYMDVVETSHATESWEDLVRYLQMARKKARESYIESE 116
AQL + E+IDS++K+ +P + V+E + E+L+ +L MAR+ RE ++
Sbjct: 1115 TAQLDGLRIPEAIDSYVKSKNPENFAQVIEIAEHAGKEEELITFLDMARETLREPVVDGA 1174
Query: 117 LIYAYARTNRLADL 130
LI AYA +RL+D+
Sbjct: 1175 LINAYATLDRLSDM 1188
>UNIPROTKB|F1NK83 [details] [associations]
symbol:CLTC "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030136 "clathrin-coated vesicle"
evidence=IEA] [GO:0031623 "receptor internalization" evidence=IEA]
[GO:0033572 "transferrin transport" evidence=IEA]
InterPro:IPR000547 InterPro:IPR011990 InterPro:IPR016024
Pfam:PF00637 GO:GO:0005739 GO:GO:0006886 SUPFAM:SSF48371
GO:GO:0007067 GO:GO:0030117 GO:GO:0005819 GO:GO:0030136
GO:GO:0031623 Gene3D:1.25.40.10 GO:GO:0033572
GeneTree:ENSGT00400000022107 EMBL:AADN02025786 IPI:IPI00821424
Ensembl:ENSGALT00000039266 Uniprot:F1NK83
Length = 126
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 4 CTEPATHNALAKIYIDSNNNPERFLK 29
C EPATHNALAKIYIDSNNNPERFL+
Sbjct: 64 CEEPATHNALAKIYIDSNNNPERFLR 89
>UNIPROTKB|J3KS13 [details] [associations]
symbol:CLTC "Clathrin heavy chain 1" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030130
"clathrin coat of trans-Golgi network vesicle" evidence=IEA]
[GO:0030132 "clathrin coat of coated pit" evidence=IEA]
InterPro:IPR000547 InterPro:IPR001473 InterPro:IPR011990
InterPro:IPR016024 InterPro:IPR016025 Pfam:PF00637 SMART:SM00299
GO:GO:0006886 SUPFAM:SSF48371 GO:GO:0016192 GO:GO:0005198
Gene3D:1.25.40.10 GO:GO:0030130 GO:GO:0030132 Gene3D:2.130.10.110
InterPro:IPR022365 Pfam:PF01394 SUPFAM:SSF50989 HGNC:HGNC:2092
ChiTaRS:CLTC EMBL:AC091271 ProteinModelPortal:J3KS13
Ensembl:ENST00000579456 Uniprot:J3KS13
Length = 612
Score = 101 (40.6 bits), Expect = 0.00021, P = 0.00021
Identities = 28/60 (46%), Positives = 40/60 (66%)
Query: 73 IKADDPSAYMDVVETSHATESWEDLVRY-LQMARK-KARESYIESELIYAYARTNRLADL 130
I AD SA M+ A ++ + L + ++M K KARESY+E+ELI+A A+TNRLA+L
Sbjct: 66 ISAD--SAIMNPASKVIALKAGKTLQIFNIEMKSKMKARESYVETELIFALAKTNRLAEL 123
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.131 0.384 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 143 131 0.00091 102 3 11 22 0.39 31
29 0.42 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 32
No. of states in DFA: 594 (63 KB)
Total size of DFA: 142 KB (2087 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.50u 0.09s 14.59t Elapsed: 00:00:01
Total cpu time: 14.50u 0.09s 14.59t Elapsed: 00:00:01
Start: Thu Aug 15 12:15:42 2013 End: Thu Aug 15 12:15:43 2013