Your job contains 1 sequence.
>psy16454
ITKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSA
HMVDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYF
GQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEE
MAKLKTRGGFGGNQGGGDPWGNNGGGGWGGGGPGPWDQGGSSWGGNSGGGWGGNSGGGWG
GNSGGGWGGNSGGGWGGNSAWGGQGGGGFGGGYQQSFGGGPMRGGGGGGRSGGAPYSGGR
GGIH
The BLAST search returned 29 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy16454
(304 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0004237 - symbol:Hrb87F "Heterogeneous nuclear rib... 667 1.5e-65 1
FB|FBgn0001215 - symbol:Hrb98DE "Heterogeneous nuclear ri... 652 6.0e-64 1
ZFIN|ZDB-GENE-040426-1546 - symbol:zgc:66127 "zgc:66127" ... 551 3.0e-53 1
UNIPROTKB|F1Q3G7 - symbol:HNRNPA1 "Uncharacterized protei... 545 1.3e-52 1
UNIPROTKB|P09867 - symbol:HNRNPA1 "Heterogeneous nuclear ... 545 1.3e-52 1
UNIPROTKB|E2QYP1 - symbol:HNRNPA1 "Uncharacterized protei... 545 1.3e-52 1
UNIPROTKB|F8VRQ1 - symbol:HNRNPA1 "Heterogeneous nuclear ... 545 1.3e-52 1
UNIPROTKB|F8VSB5 - symbol:HNRNPA1 "Heterogeneous nuclear ... 545 1.3e-52 1
UNIPROTKB|F8VXY0 - symbol:HNRNPA1 "Heterogeneous nuclear ... 545 1.3e-52 1
UNIPROTKB|F8VZ49 - symbol:HNRNPA1 "Heterogeneous nuclear ... 545 1.3e-52 1
UNIPROTKB|F8W1S7 - symbol:HNRNPA1 "Heterogeneous nuclear ... 545 1.3e-52 1
UNIPROTKB|F8W6I7 - symbol:HNRNPA1 "Heterogeneous nuclear ... 545 1.3e-52 1
UNIPROTKB|P09651 - symbol:HNRNPA1 "Heterogeneous nuclear ... 545 1.3e-52 1
UNIPROTKB|Q06A94 - symbol:HNRNPA1 "Uncharacterized protei... 545 1.3e-52 1
UNIPROTKB|A5A6H4 - symbol:HNRNPA1 "Heterogeneous nuclear ... 545 1.3e-52 1
MGI|MGI:104820 - symbol:Hnrnpa1 "heterogeneous nuclear ri... 545 1.3e-52 1
UNIPROTKB|D4ACJ7 - symbol:Hnrnpa1 "RCG50547, isoform CRA_... 545 1.3e-52 1
UNIPROTKB|D4ACJ8 - symbol:Hnrnpa1 "Heterogeneous nuclear ... 545 1.3e-52 1
UNIPROTKB|Q5I0M7 - symbol:Hnrnpa1 "Hnrpa1 protein" specie... 545 1.3e-52 1
UNIPROTKB|Q5ZME1 - symbol:HNRNPA2B1 "Uncharacterized prot... 545 1.3e-52 1
UNIPROTKB|Q9TTV2 - symbol:HNRNPA2B1 "Heterogeneous nuclea... 545 1.3e-52 1
UNIPROTKB|Q2HJ60 - symbol:HNRNPA2B1 "Heterogeneous nuclea... 542 2.7e-52 1
UNIPROTKB|F1Q1K6 - symbol:HNRNPA2B1 "Uncharacterized prot... 542 2.7e-52 1
UNIPROTKB|P22626 - symbol:HNRNPA2B1 "Heterogeneous nuclea... 542 2.7e-52 1
UNIPROTKB|Q5RBU8 - symbol:HNRNPA2B1 "Heterogeneous nuclea... 542 2.7e-52 1
MGI|MGI:104819 - symbol:Hnrnpa2b1 "heterogeneous nuclear ... 542 2.7e-52 1
UNIPROTKB|F1LM82 - symbol:Hnrnpa2b1 "Heterogeneous nuclea... 542 2.7e-52 1
UNIPROTKB|F1LNF1 - symbol:Hnrnpa2b1 "Heterogeneous nuclea... 542 2.7e-52 1
UNIPROTKB|Q28521 - symbol:HNRNPA1 "Heterogeneous nuclear ... 541 3.5e-52 1
RGD|1310403 - symbol:Hnrnpa2b1 "heterogeneous nuclear rib... 541 3.5e-52 1
RGD|69234 - symbol:Hnrnpa1 "heterogeneous nuclear ribonuc... 540 4.4e-52 1
UNIPROTKB|F1RX74 - symbol:HNRNPA2B1 "Uncharacterized prot... 538 7.2e-52 1
UNIPROTKB|E1BZE6 - symbol:LOC100859627 "Uncharacterized p... 537 9.2e-52 1
UNIPROTKB|F1NBB6 - symbol:LOC100859627 "Uncharacterized p... 537 9.2e-52 1
UNIPROTKB|F1P5I0 - symbol:LOC100859627 "Uncharacterized p... 537 9.2e-52 1
UNIPROTKB|Q32P51 - symbol:HNRNPA1L2 "Heterogeneous nuclea... 535 1.5e-51 1
UNIPROTKB|E1BEG2 - symbol:HNRNPA3 "Uncharacterized protei... 533 2.4e-51 1
UNIPROTKB|E2RFV7 - symbol:HNRNPA3 "Uncharacterized protei... 533 2.4e-51 1
UNIPROTKB|E7EWI9 - symbol:HNRNPA3 "Heterogeneous nuclear ... 533 2.4e-51 1
UNIPROTKB|P51991 - symbol:HNRNPA3 "Heterogeneous nuclear ... 533 2.4e-51 1
UNIPROTKB|F2Z5B4 - symbol:HNRNPA3 "Uncharacterized protei... 533 2.4e-51 1
RGD|2321074 - symbol:LOC100360986 "mCG1035404-like" speci... 533 2.4e-51 1
RGD|727807 - symbol:Hnrnpa3 "heterogeneous nuclear ribonu... 533 2.4e-51 1
UNIPROTKB|F1LNG4 - symbol:Hnrnpa3 "Heterogeneous nuclear ... 533 2.4e-51 1
ZFIN|ZDB-GENE-030912-14 - symbol:hnrnpa1 "heterogeneous n... 531 4.0e-51 1
UNIPROTKB|F1M2S4 - symbol:F1M2S4 "Uncharacterized protein... 523 2.8e-50 1
UNIPROTKB|F1M460 - symbol:F1M460 "Uncharacterized protein... 522 3.6e-50 1
UNIPROTKB|D4A6A2 - symbol:D4A6A2 "Uncharacterized protein... 521 4.6e-50 1
FB|FBgn0004903 - symbol:Rb97D "Ribonuclear protein at 97D... 519 7.4e-50 1
ZFIN|ZDB-GENE-060224-1 - symbol:hnrnpa3 "heterogeneous nu... 518 9.5e-50 1
UNIPROTKB|D4A491 - symbol:D4A491 "Uncharacterized protein... 513 3.2e-49 1
UNIPROTKB|D4A1X0 - symbol:D4A1X0 "Uncharacterized protein... 513 3.2e-49 1
UNIPROTKB|F1M6U1 - symbol:F1M6U1 "Uncharacterized protein... 508 1.1e-48 1
UNIPROTKB|F1SA35 - symbol:LOC100737421 "Uncharacterized p... 506 1.8e-48 1
UNIPROTKB|G5E5V7 - symbol:G5E5V7 "Uncharacterized protein... 505 2.3e-48 1
UNIPROTKB|E9PSU5 - symbol:E9PSU5 "Uncharacterized protein... 504 2.9e-48 1
UNIPROTKB|F1M5N1 - symbol:F1M5N1 "Uncharacterized protein... 504 2.9e-48 1
UNIPROTKB|F1N3T3 - symbol:F1N3T3 "Uncharacterized protein... 503 3.7e-48 1
UNIPROTKB|F1PGQ0 - symbol:F1PGQ0 "Uncharacterized protein... 497 1.6e-47 1
ZFIN|ZDB-GENE-030131-6154 - symbol:hnrnpa0b "heterogeneou... 496 2.0e-47 1
UNIPROTKB|F1N4K3 - symbol:F1N4K3 "Uncharacterized protein... 493 4.2e-47 1
WB|WBGene00001999 - symbol:hrp-1 species:6239 "Caenorhabd... 492 5.4e-47 1
UNIPROTKB|F1PVY3 - symbol:F1PVY3 "Uncharacterized protein... 490 8.8e-47 1
UNIPROTKB|E2R5N6 - symbol:E2R5N6 "Uncharacterized protein... 490 8.8e-47 1
UNIPROTKB|F1Q2T4 - symbol:F1Q2T4 "Uncharacterized protein... 488 1.4e-46 1
ZFIN|ZDB-GENE-030131-2249 - symbol:hnrnpa0a "heterogeneou... 482 6.2e-46 1
UNIPROTKB|D4AD23 - symbol:D4AD23 "Uncharacterized protein... 480 1.0e-45 1
UNIPROTKB|D4A2D2 - symbol:D4A2D2 "Uncharacterized protein... 474 4.4e-45 1
UNIPROTKB|F1M6S2 - symbol:F1M6S2 "Uncharacterized protein... 469 1.5e-44 1
UNIPROTKB|E2RJI3 - symbol:LOC608729 "Uncharacterized prot... 469 1.5e-44 1
UNIPROTKB|F6RSR1 - symbol:HNRNPA0 "Uncharacterized protei... 467 2.4e-44 1
UNIPROTKB|F1RH94 - symbol:HNRNPA0 "Uncharacterized protei... 467 2.4e-44 1
UNIPROTKB|E2RBV8 - symbol:HNRNPA0 "Uncharacterized protei... 466 3.1e-44 1
UNIPROTKB|Q13151 - symbol:HNRNPA0 "Heterogeneous nuclear ... 466 3.1e-44 1
MGI|MGI:1924384 - symbol:Hnrnpa0 "heterogeneous nuclear r... 465 3.9e-44 1
ZFIN|ZDB-GENE-030131-618 - symbol:hnrnpa0l "heterogeneous... 464 5.0e-44 1
UNIPROTKB|F1N235 - symbol:F1N235 "Uncharacterized protein... 463 6.4e-44 1
UNIPROTKB|E2RF95 - symbol:E2RF95 "Uncharacterized protein... 462 8.1e-44 1
UNIPROTKB|E2RJS6 - symbol:E2RJS6 "Uncharacterized protein... 459 1.7e-43 1
UNIPROTKB|F1SCL3 - symbol:LOC100522980 "Uncharacterized p... 459 1.7e-43 1
UNIPROTKB|F1SCM6 - symbol:LOC100522063 "Uncharacterized p... 459 1.7e-43 1
UNIPROTKB|F1M117 - symbol:F1M117 "Uncharacterized protein... 458 2.2e-43 1
UNIPROTKB|F1M5L3 - symbol:F1M5L3 "Uncharacterized protein... 458 2.2e-43 1
UNIPROTKB|E2RJS4 - symbol:E2RJS4 "Uncharacterized protein... 457 2.8e-43 1
UNIPROTKB|D4AB76 - symbol:D4AB76 "Uncharacterized protein... 454 5.7e-43 1
UNIPROTKB|F1LUM4 - symbol:F1LUM4 "Uncharacterized protein... 453 7.3e-43 1
UNIPROTKB|F1M6C7 - symbol:F1M6C7 "Uncharacterized protein... 452 9.3e-43 1
UNIPROTKB|F1LYN9 - symbol:F1LYN9 "Uncharacterized protein... 451 1.2e-42 1
UNIPROTKB|F1NCI5 - symbol:HNRNPA0 "Uncharacterized protei... 448 2.5e-42 1
UNIPROTKB|F1LW71 - symbol:F1LW71 "Uncharacterized protein... 443 8.4e-42 1
UNIPROTKB|F1MW51 - symbol:F1MW51 "Uncharacterized protein... 436 4.6e-41 1
UNIPROTKB|F1MTY3 - symbol:F1MTY3 "Uncharacterized protein... 435 5.9e-41 1
UNIPROTKB|F1M3H8 - symbol:F1M3H8 "Uncharacterized protein... 434 7.5e-41 1
UNIPROTKB|F1PP12 - symbol:F1PP12 "Uncharacterized protein... 434 7.5e-41 1
UNIPROTKB|F1LYB2 - symbol:F1LYB2 "Uncharacterized protein... 431 1.6e-40 1
UNIPROTKB|E2QXH4 - symbol:HNRNPA2B1 "Uncharacterized prot... 430 2.0e-40 1
UNIPROTKB|F1LZZ2 - symbol:F1LZZ2 "Uncharacterized protein... 430 2.0e-40 1
UNIPROTKB|F1LVU1 - symbol:F1LVU1 "Uncharacterized protein... 429 2.6e-40 1
UNIPROTKB|D4ACP9 - symbol:D4ACP9 "Uncharacterized protein... 424 8.7e-40 1
UNIPROTKB|D4A8U2 - symbol:D4A8U2 "Uncharacterized protein... 423 1.1e-39 1
WARNING: Descriptions of 1300 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0004237 [details] [associations]
symbol:Hrb87F "Heterogeneous nuclear ribonucleoprotein at
87F" species:7227 "Drosophila melanogaster" [GO:0030529
"ribonucleoprotein complex" evidence=ISS;NAS;IDA;IPI] [GO:0005703
"polytene chromosome puff" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=IDA] [GO:0003729 "mRNA binding" evidence=ISS;NAS]
[GO:0000785 "chromatin" evidence=IDA] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0035062 "omega speckle" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=IMP] [GO:0001745 "compound eye morphogenesis"
evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0007067 "mitosis" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 EMBL:AE014297
GO:GO:0005737 GO:GO:0007067 GO:GO:0022008 GO:GO:0000166
GO:GO:0043565 GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0000785
GO:GO:0030529 eggNOG:COG0724 GO:GO:0005703 GO:GO:0000381
GeneTree:ENSGT00700000104255 KO:K12741 EMBL:X54803 EMBL:X58183
EMBL:X58184 EMBL:X59691 EMBL:X62636 EMBL:BT012315 PIR:A41732
PIR:S22315 RefSeq:NP_001163602.1 RefSeq:NP_476806.1
RefSeq:NP_476807.1 UniGene:Dm.1711 ProteinModelPortal:P48810
SMR:P48810 IntAct:P48810 MINT:MINT-296059 STRING:P48810
PaxDb:P48810 EnsemblMetazoa:FBtr0082851 EnsemblMetazoa:FBtr0300590
EnsemblMetazoa:FBtr0310621 GeneID:48535 KEGG:dme:Dmel_CG12749
CTD:48535 FlyBase:FBgn0004237 InParanoid:P48810 OMA:MENRDAK
OrthoDB:EOG46WWRF PhylomeDB:P48810 ChiTaRS:Hrb87F GenomeRNAi:48535
NextBio:839451 Bgee:P48810 GermOnline:CG12749 GO:GO:0035062
Uniprot:P48810
Length = 385
Score = 667 (239.9 bits), Expect = 1.5e-65, P = 1.5e-65
Identities = 121/178 (67%), Positives = 151/178 (84%)
Query: 4 EPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMV 63
EPE LRKLFIGGLDYRT+ + LK+HFE WG++VDVVVMKDP+TK+SRGFGFITYS ++M+
Sbjct: 19 EPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMI 78
Query: 64 DDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQF 123
D+AQ ARPH ID + VEPKRAVPR EI+ P AGATVKKLFVG LRDD EE L+EYF F
Sbjct: 79 DNAQNARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEECLREYFKDF 138
Query: 124 GEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEM 181
G++ SV +V++K+TGKKRGF F+E++DYDPVDK L+ TH +K K +DVKKA++K++M
Sbjct: 139 GQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQDM 196
Score = 150 (57.9 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 29/89 (32%), Positives = 51/89 (57%)
Query: 8 LRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQ 67
++KLF+GGL E L+ +F+ +G +V V ++ D T K RGF FI + VD
Sbjct: 114 VKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKII 173
Query: 68 AARPHTIDSKVVEPKRAVPRTEINRPEAG 96
+ H+I +K ++ K+A+ + +++R G
Sbjct: 174 LQKTHSIKNKTLDVKKAIAKQDMDRQGGG 202
>FB|FBgn0001215 [details] [associations]
symbol:Hrb98DE "Heterogeneous nuclear ribonucleoprotein at
98DE" species:7227 "Drosophila melanogaster" [GO:0030529
"ribonucleoprotein complex" evidence=ISS;NAS;IDA;IPI] [GO:0003729
"mRNA binding" evidence=ISS;NAS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001745 "compound eye morphogenesis"
evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IMP] [GO:0005703 "polytene chromosome
puff" evidence=IDA] [GO:0033119 "negative regulation of RNA
splicing" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0045727 "positive regulation of translation" evidence=IMP]
[GO:0048477 "oogenesis" evidence=IMP] [GO:0036099 "female germ-line
stem cell maintenance" evidence=IMP] [GO:0048027 "mRNA 5'-UTR
binding" evidence=IDA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 EMBL:AE014297
GO:GO:0005634 GO:GO:0000166 GO:GO:0043565 Gene3D:3.30.70.330
GO:GO:0048477 GO:GO:0048027 GO:GO:0030529 GO:GO:0033119
GO:GO:0045727 eggNOG:COG0724 GO:GO:0005703 GO:GO:0000381
GeneTree:ENSGT00700000104255 GO:GO:0036099 KO:K12741
OrthoDB:EOG46WWRF EMBL:M15766 EMBL:M25545 EMBL:M28871 EMBL:M28872
EMBL:M33955 EMBL:M31560 EMBL:M28870 EMBL:AY061448 PIR:A26459
RefSeq:NP_524543.1 RefSeq:NP_733249.1 RefSeq:NP_733250.1
RefSeq:NP_733251.1 RefSeq:NP_733252.1 RefSeq:NP_733253.1
UniGene:Dm.7147 ProteinModelPortal:P07909 SMR:P07909 DIP:DIP-19217N
IntAct:P07909 MINT:MINT-764040 STRING:P07909 PaxDb:P07909
PRIDE:P07909 EnsemblMetazoa:FBtr0085300 EnsemblMetazoa:FBtr0085301
GeneID:43385 KEGG:dme:Dmel_CG9983 CTD:43385 FlyBase:FBgn0001215
InParanoid:P07909 OMA:INIVIDK PhylomeDB:P07909 ChiTaRS:Hrb98DE
GenomeRNAi:43385 NextBio:833644 Bgee:P07909 GermOnline:CG9983
Uniprot:P07909
Length = 365
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 117/176 (66%), Positives = 146/176 (82%)
Query: 4 EPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMV 63
EPEH+RKLFIGGLDYRT+ E LK+HFE WG++VDVVVMKDP+TK+SRGFGFITYS + M+
Sbjct: 26 EPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMI 85
Query: 64 DDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQF 123
D+AQ +RPH ID +VVEPKRAVPR +I+ P AGATVKKLFVG+L+DD E+ +++YF F
Sbjct: 86 DEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQHF 145
Query: 124 GEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKE 179
G + + +V +KETGKKRGF FVE++DYDPVDK L+ H + GK VDVKKAL K+
Sbjct: 146 GNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQ 201
Score = 156 (60.0 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 30/96 (31%), Positives = 57/96 (59%)
Query: 86 PRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGF 145
P+ I PE ++KLF+G L T+E+LK +F ++G + V ++ + T + RGFGF
Sbjct: 20 PQDSITEPEH---MRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGF 76
Query: 146 VEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEM 181
+ Y+ +D+A H + G+ V+ K+A+ ++++
Sbjct: 77 ITYSHSSMIDEAQKSRPHKIDGRVVEPKRAVPRQDI 112
>ZFIN|ZDB-GENE-040426-1546 [details] [associations]
symbol:zgc:66127 "zgc:66127" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-040426-1546 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GeneTree:ENSGT00700000104376 EMBL:CABZ01055593
EMBL:CABZ01000532 EMBL:CABZ01000533 EMBL:CABZ01000534
EMBL:CABZ01000536 EMBL:CABZ01000539 EMBL:CABZ01000540
EMBL:CABZ01085064 EMBL:CABZ01085065 EMBL:CABZ01085066
EMBL:CABZ01085067 EMBL:CABZ01085068 EMBL:CABZ01088246
EMBL:CABZ01088247 EMBL:CABZ01088248 EMBL:CABZ01088249
EMBL:CABZ01088250 EMBL:CABZ01088251 EMBL:CABZ01092715
EMBL:CABZ01092716 EMBL:CABZ01092717 EMBL:CABZ01092718
IPI:IPI00971841 Ensembl:ENSDART00000082448 Bgee:E7FAB3
Uniprot:E7FAB3
Length = 411
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 98/182 (53%), Positives = 137/182 (75%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
+EPE LRKLFIGGL + T+ E+L++HFE WG + D VVM+DP TK+SRGFGF+TYSS
Sbjct: 32 REPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSSVGE 91
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARPH +D + VEPKRAV R + ++P A +TVKK+FVG +++D EE L+EYFGQ
Sbjct: 92 VDAAMDARPHKVDGRAVEPKRAVSREDSSKPGAHSTVKKMFVGGIKEDTDEEHLREYFGQ 151
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
FG++ V ++TEK + K+RGF F+ ++D+D VD+ ++ H V G +V+KALS+EEM
Sbjct: 152 FGKIDEVNIMTEKNSDKRRGFAFITFDDHDAVDRIVIQKYHTVNGHNCEVRKALSREEMN 211
Query: 183 KL 184
++
Sbjct: 212 RV 213
Score = 169 (64.5 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 39/119 (32%), Positives = 68/119 (57%)
Query: 65 DAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFG 124
+A++A H + + + ++ PR PE ++KLF+G L + T+E L+ +F Q+G
Sbjct: 12 EAESAVSHRVTA--MSKEQQTPR----EPEQ---LRKLFIGGLSFETTDESLRAHFEQWG 62
Query: 125 EVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMAK 183
+T ++ + T + RGFGFV Y+ VD A H V G+ V+ K+A+S+E+ +K
Sbjct: 63 TLTDCVVMRDPNTKRSRGFGFVTYSSVGEVDAAMDARPHKVDGRAVEPKRAVSREDSSK 121
>UNIPROTKB|F1Q3G7 [details] [associations]
symbol:HNRNPA1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0005654 GO:GO:0005730
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003697 GO:GO:0071013
GO:GO:0051168 GO:GO:0000380 GO:GO:0051170
GeneTree:ENSGT00550000074566 EMBL:AAEX03014967
Ensembl:ENSCAFT00000010627 OMA:QAQQGGW Uniprot:F1Q3G7
Length = 384
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 98/180 (54%), Positives = 134/180 (74%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFIGGL + T+ E+L+SHFE WG + D VVM+DP TK+SRGFGF+TY++
Sbjct: 29 KEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE 88
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARPH +D +VVEPKRAV R + RP A TVKK+FVG +++D E L++YF Q
Sbjct: 89 VDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQ 148
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G++ + ++T++ +GKKRGF FV ++D+D VDK ++ H V G +V+KALSK+EMA
Sbjct: 149 YGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMA 208
Score = 171 (65.3 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 41/120 (34%), Positives = 66/120 (55%)
Query: 61 HMVDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYF 120
H + DAQ R + K+A P++ PE ++KLF+G L + T+E L+ +F
Sbjct: 1 HPIRDAQG-RSLPMPKARRRDKKARPKSP-KEPEQ---LRKLFIGGLSFETTDESLRSHF 55
Query: 121 GQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEE 180
Q+G +T ++ + T + RGFGFV Y + VD A H V G+ V+ K+A+S+E+
Sbjct: 56 EQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSRED 115
>UNIPROTKB|P09867 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9913 "Bos taurus" [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000380
"alternative mRNA splicing, via spliceosome" evidence=IEA]
[GO:0051028 "mRNA transport" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0005654 GO:GO:0005730
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0003697
GO:GO:0030529 GO:GO:0051028 GO:GO:0071013 GO:GO:0051168
eggNOG:COG0724 GO:GO:0000380 HOVERGEN:HBG002295 GO:GO:0051170
HOGENOM:HOG000234442 KO:K12741 OrthoDB:EOG4HQDKF InterPro:IPR021662
Pfam:PF11627 EMBL:BC105413 IPI:IPI00692235 PIR:A27241
RefSeq:NP_001039376.1 UniGene:Bt.88002 ProteinModelPortal:P09867
SMR:P09867 STRING:P09867 PRIDE:P09867 Ensembl:ENSBTAT00000002033
GeneID:505093 KEGG:bta:505093 CTD:3178 GeneTree:ENSGT00550000074566
OMA:IEVEIMT BindingDB:P09867 NextBio:20866978 Uniprot:P09867
Length = 320
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 98/180 (54%), Positives = 134/180 (74%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFIGGL + T+ E+L+SHFE WG + D VVM+DP TK+SRGFGF+TY++
Sbjct: 8 KEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE 67
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARPH +D +VVEPKRAV R + RP A TVKK+FVG +++D E L++YF Q
Sbjct: 68 VDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQ 127
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G++ + ++T++ +GKKRGF FV ++D+D VDK ++ H V G +V+KALSK+EMA
Sbjct: 128 YGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMA 187
Score = 163 (62.4 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 32/88 (36%), Positives = 53/88 (60%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ ++KLF+G L + T+E L+ +F Q+G +T ++ + T + RGFGFV Y +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEE 180
VD A H V G+ V+ K+A+S+E+
Sbjct: 67 EVDAAMNARPHKVDGRVVEPKRAVSRED 94
>UNIPROTKB|E2QYP1 [details] [associations]
symbol:HNRNPA1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00550000074566 EMBL:AAEX03014967
ProteinModelPortal:E2QYP1 PRIDE:E2QYP1 Ensembl:ENSCAFT00000010628
NextBio:20853043 Uniprot:E2QYP1
Length = 373
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 98/180 (54%), Positives = 134/180 (74%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFIGGL + T+ E+L+SHFE WG + D VVM+DP TK+SRGFGF+TY++
Sbjct: 8 KEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE 67
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARPH +D +VVEPKRAV R + RP A TVKK+FVG +++D E L++YF Q
Sbjct: 68 VDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQ 127
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G++ + ++T++ +GKKRGF FV ++D+D VDK ++ H V G +V+KALSK+EMA
Sbjct: 128 YGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMA 187
Score = 163 (62.4 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 32/88 (36%), Positives = 53/88 (60%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ ++KLF+G L + T+E L+ +F Q+G +T ++ + T + RGFGFV Y +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEE 180
VD A H V G+ V+ K+A+S+E+
Sbjct: 67 EVDAAMNARPHKVDGRVVEPKRAVSRED 94
>UNIPROTKB|F8VRQ1 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0005730 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0045111 InterPro:IPR021662
Pfam:PF11627 EMBL:AC078778 HGNC:HGNC:5031 ChiTaRS:HNRNPA1
IPI:IPI01021093 ProteinModelPortal:F8VRQ1 SMR:F8VRQ1 PRIDE:F8VRQ1
Ensembl:ENST00000551133 ArrayExpress:F8VRQ1 Bgee:F8VRQ1
Uniprot:F8VRQ1
Length = 307
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 98/180 (54%), Positives = 134/180 (74%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFIGGL + T+ E+L+SHFE WG + D VVM+DP TK+SRGFGF+TY++
Sbjct: 8 KEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE 67
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARPH +D +VVEPKRAV R + RP A TVKK+FVG +++D E L++YF Q
Sbjct: 68 VDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQ 127
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G++ + ++T++ +GKKRGF FV ++D+D VDK ++ H V G +V+KALSK+EMA
Sbjct: 128 YGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMA 187
Score = 163 (62.4 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 32/88 (36%), Positives = 53/88 (60%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ ++KLF+G L + T+E L+ +F Q+G +T ++ + T + RGFGFV Y +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEE 180
VD A H V G+ V+ K+A+S+E+
Sbjct: 67 EVDAAMNARPHKVDGRVVEPKRAVSRED 94
>UNIPROTKB|F8VSB5 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0005730 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0045111 InterPro:IPR021662
Pfam:PF11627 EMBL:AC078778 HGNC:HGNC:5031 ChiTaRS:HNRNPA1
IPI:IPI01022218 ProteinModelPortal:F8VSB5 SMR:F8VSB5 PRIDE:F8VSB5
Ensembl:ENST00000552494 ArrayExpress:F8VSB5 Bgee:F8VSB5
Uniprot:F8VSB5
Length = 306
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 98/180 (54%), Positives = 134/180 (74%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFIGGL + T+ E+L+SHFE WG + D VVM+DP TK+SRGFGF+TY++
Sbjct: 8 KEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE 67
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARPH +D +VVEPKRAV R + RP A TVKK+FVG +++D E L++YF Q
Sbjct: 68 VDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQ 127
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G++ + ++T++ +GKKRGF FV ++D+D VDK ++ H V G +V+KALSK+EMA
Sbjct: 128 YGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMA 187
Score = 163 (62.4 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 32/88 (36%), Positives = 53/88 (60%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ ++KLF+G L + T+E L+ +F Q+G +T ++ + T + RGFGFV Y +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEE 180
VD A H V G+ V+ K+A+S+E+
Sbjct: 67 EVDAAMNARPHKVDGRVVEPKRAVSRED 94
>UNIPROTKB|F8VXY0 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0005730 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0045111 InterPro:IPR021662
Pfam:PF11627 EMBL:AC078778 HGNC:HGNC:5031 ChiTaRS:HNRNPA1
IPI:IPI01022801 ProteinModelPortal:F8VXY0 SMR:F8VXY0 PRIDE:F8VXY0
Ensembl:ENST00000547617 ArrayExpress:F8VXY0 Bgee:F8VXY0
Uniprot:F8VXY0
Length = 304
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 98/180 (54%), Positives = 134/180 (74%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFIGGL + T+ E+L+SHFE WG + D VVM+DP TK+SRGFGF+TY++
Sbjct: 8 KEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE 67
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARPH +D +VVEPKRAV R + RP A TVKK+FVG +++D E L++YF Q
Sbjct: 68 VDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQ 127
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G++ + ++T++ +GKKRGF FV ++D+D VDK ++ H V G +V+KALSK+EMA
Sbjct: 128 YGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMA 187
Score = 163 (62.4 bits), Expect = 9.8e-12, P = 9.8e-12
Identities = 32/88 (36%), Positives = 53/88 (60%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ ++KLF+G L + T+E L+ +F Q+G +T ++ + T + RGFGFV Y +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEE 180
VD A H V G+ V+ K+A+S+E+
Sbjct: 67 EVDAAMNARPHKVDGRVVEPKRAVSRED 94
>UNIPROTKB|F8VZ49 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0005730 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0045111 EMBL:AC078778
HGNC:HGNC:5031 ChiTaRS:HNRNPA1 IPI:IPI01022460
ProteinModelPortal:F8VZ49 SMR:F8VZ49 PRIDE:F8VZ49
Ensembl:ENST00000548688 ArrayExpress:F8VZ49 Bgee:F8VZ49
Uniprot:F8VZ49
Length = 231
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 98/180 (54%), Positives = 134/180 (74%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFIGGL + T+ E+L+SHFE WG + D VVM+DP TK+SRGFGF+TY++
Sbjct: 27 KEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE 86
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARPH +D +VVEPKRAV R + RP A TVKK+FVG +++D E L++YF Q
Sbjct: 87 VDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQ 146
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G++ + ++T++ +GKKRGF FV ++D+D VDK ++ H V G +V+KALSK+EMA
Sbjct: 147 YGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMA 206
Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 32/88 (36%), Positives = 53/88 (60%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ ++KLF+G L + T+E L+ +F Q+G +T ++ + T + RGFGFV Y +
Sbjct: 26 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 85
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEE 180
VD A H V G+ V+ K+A+S+E+
Sbjct: 86 EVDAAMNARPHKVDGRVVEPKRAVSRED 113
>UNIPROTKB|F8W1S7 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0005730 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0045111 InterPro:IPR021662
Pfam:PF11627 EMBL:AC078778 HGNC:HGNC:5031 ChiTaRS:HNRNPA1
IPI:IPI01021812 ProteinModelPortal:F8W1S7 SMR:F8W1S7 PRIDE:F8W1S7
Ensembl:ENST00000552591 ArrayExpress:F8W1S7 Bgee:F8W1S7
Uniprot:F8W1S7
Length = 330
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 98/180 (54%), Positives = 134/180 (74%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFIGGL + T+ E+L+SHFE WG + D VVM+DP TK+SRGFGF+TY++
Sbjct: 8 KEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE 67
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARPH +D +VVEPKRAV R + RP A TVKK+FVG +++D E L++YF Q
Sbjct: 68 VDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQ 127
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G++ + ++T++ +GKKRGF FV ++D+D VDK ++ H V G +V+KALSK+EMA
Sbjct: 128 YGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMA 187
Score = 163 (62.4 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 32/88 (36%), Positives = 53/88 (60%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ ++KLF+G L + T+E L+ +F Q+G +T ++ + T + RGFGFV Y +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEE 180
VD A H V G+ V+ K+A+S+E+
Sbjct: 67 EVDAAMNARPHKVDGRVVEPKRAVSRED 94
>UNIPROTKB|F8W6I7 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0005730 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0045111 InterPro:IPR021662
Pfam:PF11627 EMBL:AC078778 HGNC:HGNC:5031 ChiTaRS:HNRNPA1
IPI:IPI01021324 ProteinModelPortal:F8W6I7 SMR:F8W6I7 PRIDE:F8W6I7
Ensembl:ENST00000330752 ArrayExpress:F8W6I7 Bgee:F8W6I7
Uniprot:F8W6I7
Length = 320
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 98/180 (54%), Positives = 134/180 (74%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFIGGL + T+ E+L+SHFE WG + D VVM+DP TK+SRGFGF+TY++
Sbjct: 8 KEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE 67
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARPH +D +VVEPKRAV R + RP A TVKK+FVG +++D E L++YF Q
Sbjct: 68 VDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQ 127
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G++ + ++T++ +GKKRGF FV ++D+D VDK ++ H V G +V+KALSK+EMA
Sbjct: 128 YGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMA 187
Score = 163 (62.4 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 32/88 (36%), Positives = 53/88 (60%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ ++KLF+G L + T+E L+ +F Q+G +T ++ + T + RGFGFV Y +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEE 180
VD A H V G+ V+ K+A+S+E+
Sbjct: 67 EVDAAMNARPHKVDGRVVEPKRAVSRED 94
>UNIPROTKB|P09651 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0051028 "mRNA transport" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;TAS] [GO:0003723 "RNA binding" evidence=TAS]
[GO:0006397 "mRNA processing" evidence=TAS] [GO:0003727
"single-stranded RNA binding" evidence=IC] [GO:0005654
"nucleoplasm" evidence=IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006405 "RNA export from nucleus" evidence=IC]
[GO:0051170 "nuclear import" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0051168 "nuclear
export" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=IDA] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] Reactome:REACT_71
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0019048 GO:GO:0005654
GO:GO:0005730 GO:GO:0000166 Reactome:REACT_1675 GO:GO:0003727
Gene3D:3.30.70.330 EMBL:CH471054 GO:GO:0045111 GO:GO:0003697
Pathway_Interaction_DB:ar_pathway GO:GO:0051028 GO:GO:0000398
GO:GO:0071013 eggNOG:COG0724 GO:GO:0000380 HOVERGEN:HBG002295
GO:GO:0051170 GO:GO:0006405 HOGENOM:HOG000234442 KO:K12741
OrthoDB:EOG4HQDKF CTD:3178 OMA:IEVEIMT EMBL:X12671 EMBL:X06747
EMBL:X79536 EMBL:AK291113 EMBL:AC078778 EMBL:BC002355 EMBL:BC009600
EMBL:BC012158 EMBL:BC033714 EMBL:BC052296 EMBL:BC070315
EMBL:BC074502 EMBL:BC103707 EMBL:X04347 IPI:IPI00215965
IPI:IPI00465365 IPI:IPI00797148 PIR:S02061 PIR:S12520
RefSeq:NP_002127.1 RefSeq:NP_112420.1 UniGene:Hs.546261
UniGene:Hs.655424 PDB:1HA1 PDB:1L3K PDB:1PGZ PDB:1PO6 PDB:1U1K
PDB:1U1L PDB:1U1M PDB:1U1N PDB:1U1O PDB:1U1P PDB:1U1Q PDB:1U1R
PDB:1UP1 PDB:2H4M PDB:2LYV PDB:2UP1 PDBsum:1HA1 PDBsum:1L3K
PDBsum:1PGZ PDBsum:1PO6 PDBsum:1U1K PDBsum:1U1L PDBsum:1U1M
PDBsum:1U1N PDBsum:1U1O PDBsum:1U1P PDBsum:1U1Q PDBsum:1U1R
PDBsum:1UP1 PDBsum:2H4M PDBsum:2LYV PDBsum:2UP1 DisProt:DP00324
ProteinModelPortal:P09651 SMR:P09651 DIP:DIP-29338N IntAct:P09651
MINT:MINT-1035550 STRING:P09651 PhosphoSite:P09651 DMDM:288558857
SWISS-2DPAGE:P09651 PaxDb:P09651 PRIDE:P09651
Ensembl:ENST00000340913 Ensembl:ENST00000546500
Ensembl:ENST00000547276 Ensembl:ENST00000547566 GeneID:3178
KEGG:hsa:3178 UCSC:uc001sfl.3 UCSC:uc001sfm.3 UCSC:uc001sfn.3
GeneCards:GC12P054674 H-InvDB:HIX0032087 H-InvDB:HIX0040127
H-InvDB:HIX0202582 HGNC:HGNC:5031 HPA:CAB010894 HPA:HPA001666
MIM:164017 neXtProt:NX_P09651 PharmGKB:PA162391113
InParanoid:P09651 PhylomeDB:P09651 BindingDB:P09651
ChEMBL:CHEMBL1955709 ChiTaRS:HNRNPA1 EvolutionaryTrace:P09651
GenomeRNAi:3178 NextBio:12614 ArrayExpress:P09651 Bgee:P09651
CleanEx:HS_HNRNPA1 Genevestigator:P09651 GermOnline:ENSG00000135486
Uniprot:P09651
Length = 372
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 98/180 (54%), Positives = 134/180 (74%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFIGGL + T+ E+L+SHFE WG + D VVM+DP TK+SRGFGF+TY++
Sbjct: 8 KEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE 67
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARPH +D +VVEPKRAV R + RP A TVKK+FVG +++D E L++YF Q
Sbjct: 68 VDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQ 127
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G++ + ++T++ +GKKRGF FV ++D+D VDK ++ H V G +V+KALSK+EMA
Sbjct: 128 YGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMA 187
Score = 163 (62.4 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 32/88 (36%), Positives = 53/88 (60%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ ++KLF+G L + T+E L+ +F Q+G +T ++ + T + RGFGFV Y +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEE 180
VD A H V G+ V+ K+A+S+E+
Sbjct: 67 EVDAAMNARPHKVDGRVVEPKRAVSRED 94
>UNIPROTKB|Q06A94 [details] [associations]
symbol:HNRNPA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0000380
"alternative mRNA splicing, via spliceosome" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005737 GO:GO:0005654 GO:GO:0005730 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003697 GO:GO:0071013 GO:GO:0051168
eggNOG:COG0724 GO:GO:0000380 HOVERGEN:HBG002295 GO:GO:0051170
HOGENOM:HOG000234442 KO:K12741 OrthoDB:EOG4HQDKF InterPro:IPR021662
Pfam:PF11627 CTD:3178 GeneTree:ENSGT00550000074566 OMA:IEVEIMT
EMBL:CU694683 EMBL:DQ972970 RefSeq:NP_001070686.1 UniGene:Ssc.49600
SMR:Q06A94 Ensembl:ENSSSCT00000000309 GeneID:768103 KEGG:ssc:768103
Uniprot:Q06A94
Length = 320
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 98/180 (54%), Positives = 134/180 (74%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFIGGL + T+ E+L+SHFE WG + D VVM+DP TK+SRGFGF+TY++
Sbjct: 8 KEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE 67
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARPH +D +VVEPKRAV R + RP A TVKK+FVG +++D E L++YF Q
Sbjct: 68 VDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQ 127
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G++ + ++T++ +GKKRGF FV ++D+D VDK ++ H V G +V+KALSK+EMA
Sbjct: 128 YGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMA 187
Score = 163 (62.4 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 32/88 (36%), Positives = 53/88 (60%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ ++KLF+G L + T+E L+ +F Q+G +T ++ + T + RGFGFV Y +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEE 180
VD A H V G+ V+ K+A+S+E+
Sbjct: 67 EVDAAMNARPHKVDGRVVEPKRAVSRED 94
>UNIPROTKB|A5A6H4 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9598 "Pan troglodytes" [GO:0030529 "ribonucleoprotein
complex" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737
GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0005681 GO:GO:0003723 GO:GO:0030529 GO:GO:0051028
eggNOG:COG0724 HOVERGEN:HBG002295 HOGENOM:HOG000234442 KO:K12741
OrthoDB:EOG4HQDKF InterPro:IPR021662 Pfam:PF11627 CTD:3178
GeneTree:ENSGT00550000074566 OMA:IEVEIMT EMBL:AB222102
EMBL:AL954201 RefSeq:NP_001091892.1 RefSeq:NP_001184040.1
RefSeq:XP_003318234.1 RefSeq:XP_003954396.1 UniGene:Ptr.6288
UniGene:Ptr.6435 ProteinModelPortal:A5A6H4 SMR:A5A6H4 PRIDE:A5A6H4
Ensembl:ENSPTRT00000010845 GeneID:100615525 GeneID:739306
GeneID:747284 KEGG:ptr:100615525 KEGG:ptr:739306 KEGG:ptr:747284
CTD:739306 InParanoid:A5A6H4 BindingDB:A5A6H4 NextBio:20906554
Uniprot:A5A6H4
Length = 320
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 98/180 (54%), Positives = 134/180 (74%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFIGGL + T+ E+L+SHFE WG + D VVM+DP TK+SRGFGF+TY++
Sbjct: 8 KEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE 67
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARPH +D +VVEPKRAV R + RP A TVKK+FVG +++D E L++YF Q
Sbjct: 68 VDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQ 127
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G++ + ++T++ +GKKRGF FV ++D+D VDK ++ H V G +V+KALSK+EMA
Sbjct: 128 YGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMA 187
Score = 163 (62.4 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 32/88 (36%), Positives = 53/88 (60%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ ++KLF+G L + T+E L+ +F Q+G +T ++ + T + RGFGFV Y +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEE 180
VD A H V G+ V+ K+A+S+E+
Sbjct: 67 EVDAAMNARPHKVDGRVVEPKRAVSRED 94
>MGI|MGI:104820 [details] [associations]
symbol:Hnrnpa1 "heterogeneous nuclear ribonucleoprotein A1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000380 "alternative mRNA splicing, via
spliceosome" evidence=IDA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=ISO]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IDA] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0051168 "nuclear export" evidence=ISO] [GO:0051170 "nuclear
import" evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 MGI:MGI:104820 GO:GO:0005737
GO:GO:0005654 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0005681
GO:GO:0003723 GO:GO:0003697 GO:GO:0051028 GO:GO:0051168
eggNOG:COG0724 GO:GO:0000380 HOVERGEN:HBG002295 GO:GO:0051170
HOGENOM:HOG000234442 KO:K12741 OrthoDB:EOG4HQDKF InterPro:IPR021662
Pfam:PF11627 CTD:3178 GeneTree:ENSGT00550000074566 ChiTaRS:HNRNPA1
EMBL:M99167 EMBL:D86729 EMBL:D86728 EMBL:AK007802 EMBL:AK088308
EMBL:AK131999 EMBL:AK135391 EMBL:AK161730 EMBL:AK166901
EMBL:AK167161 EMBL:AK167810 EMBL:AK167913 EMBL:AK168420
EMBL:AK168531 EMBL:BC080675 EMBL:BC083136 IPI:IPI00553777
IPI:IPI00817004 PIR:A44485 RefSeq:NP_034577.1 UniGene:Mm.237064
UniGene:Mm.432031 ProteinModelPortal:P49312 SMR:P49312
IntAct:P49312 STRING:P49312 PhosphoSite:P49312 PaxDb:P49312
PRIDE:P49312 Ensembl:ENSMUST00000087351 GeneID:15382 KEGG:mmu:15382
UCSC:uc007xxp.1 UCSC:uc012aah.1 BindingDB:P49312 NextBio:288050
Bgee:P49312 CleanEx:MM_HNRNPA1 Genevestigator:P49312
GermOnline:ENSMUSG00000058922 Uniprot:P49312
Length = 320
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 98/180 (54%), Positives = 134/180 (74%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFIGGL + T+ E+L+SHFE WG + D VVM+DP TK+SRGFGF+TY++
Sbjct: 8 KEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE 67
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARPH +D +VVEPKRAV R + RP A TVKK+FVG +++D E L++YF Q
Sbjct: 68 VDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQ 127
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G++ + ++T++ +GKKRGF FV ++D+D VDK ++ H V G +V+KALSK+EMA
Sbjct: 128 YGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMA 187
Score = 163 (62.4 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 32/88 (36%), Positives = 53/88 (60%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ ++KLF+G L + T+E L+ +F Q+G +T ++ + T + RGFGFV Y +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEE 180
VD A H V G+ V+ K+A+S+E+
Sbjct: 67 EVDAAMNARPHKVDGRVVEPKRAVSRED 94
>UNIPROTKB|D4ACJ7 [details] [associations]
symbol:Hnrnpa1 "RCG50547, isoform CRA_b" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:69234 GO:GO:0005737 GO:GO:0005654 GO:GO:0005730 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003697 GO:GO:0071013 GO:GO:0051168
EMBL:CH474035 GO:GO:0000380 GO:GO:0051170 OrthoDB:EOG4HQDKF
OMA:IEVEIMT IPI:IPI00781944 SMR:D4ACJ7 Ensembl:ENSRNOT00000055284
Uniprot:D4ACJ7
Length = 373
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 98/180 (54%), Positives = 134/180 (74%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFIGGL + T+ E+L+SHFE WG + D VVM+DP TK+SRGFGF+TY++
Sbjct: 8 KEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE 67
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARPH +D +VVEPKRAV R + RP A TVKK+FVG +++D E L++YF Q
Sbjct: 68 VDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQ 127
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G++ + ++T++ +GKKRGF FV ++D+D VDK ++ H V G +V+KALSK+EMA
Sbjct: 128 YGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMA 187
Score = 163 (62.4 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 32/88 (36%), Positives = 53/88 (60%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ ++KLF+G L + T+E L+ +F Q+G +T ++ + T + RGFGFV Y +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEE 180
VD A H V G+ V+ K+A+S+E+
Sbjct: 67 EVDAAMNARPHKVDGRVVEPKRAVSRED 94
>UNIPROTKB|D4ACJ8 [details] [associations]
symbol:Hnrnpa1 "Heterogeneous nuclear ribonucleoprotein A1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 RGD:69234 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 IPI:IPI00780243 Ensembl:ENSRNOT00000055282
ArrayExpress:D4ACJ8 Uniprot:D4ACJ8
Length = 268
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 98/180 (54%), Positives = 134/180 (74%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFIGGL + T+ E+L+SHFE WG + D VVM+DP TK+SRGFGF+TY++
Sbjct: 8 KEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE 67
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARPH +D +VVEPKRAV R + RP A TVKK+FVG +++D E L++YF Q
Sbjct: 68 VDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQ 127
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G++ + ++T++ +GKKRGF FV ++D+D VDK ++ H V G +V+KALSK+EMA
Sbjct: 128 YGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMA 187
Score = 163 (62.4 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 32/88 (36%), Positives = 53/88 (60%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ ++KLF+G L + T+E L+ +F Q+G +T ++ + T + RGFGFV Y +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEE 180
VD A H V G+ V+ K+A+S+E+
Sbjct: 67 EVDAAMNARPHKVDGRVVEPKRAVSRED 94
>UNIPROTKB|Q5I0M7 [details] [associations]
symbol:Hnrnpa1 "Hnrpa1 protein" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:69234 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:CH474035 eggNOG:COG0724 HOVERGEN:HBG002295 InterPro:IPR021662
Pfam:PF11627 GeneTree:ENSGT00550000074566 IPI:IPI00421500
UniGene:Rn.25771 EMBL:BC088150 SMR:Q5I0M7 STRING:Q5I0M7
Ensembl:ENSRNOT00000055285 Genevestigator:Q5I0M7 Uniprot:Q5I0M7
Length = 320
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 98/180 (54%), Positives = 134/180 (74%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFIGGL + T+ E+L+SHFE WG + D VVM+DP TK+SRGFGF+TY++
Sbjct: 8 KEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE 67
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARPH +D +VVEPKRAV R + RP A TVKK+FVG +++D E L++YF Q
Sbjct: 68 VDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQ 127
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G++ + ++T++ +GKKRGF FV ++D+D VDK ++ H V G +V+KALSK+EMA
Sbjct: 128 YGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMA 187
Score = 163 (62.4 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 32/88 (36%), Positives = 53/88 (60%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ ++KLF+G L + T+E L+ +F Q+G +T ++ + T + RGFGFV Y +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEE 180
VD A H V G+ V+ K+A+S+E+
Sbjct: 67 EVDAAMNARPHKVDGRVVEPKRAVSRED 94
>UNIPROTKB|Q5ZME1 [details] [associations]
symbol:HNRNPA2B1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0043047 "single-stranded telomeric DNA binding"
evidence=IEA] [GO:0048025 "negative regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0050658 "RNA transport"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0097157 GO:GO:0048025 eggNOG:COG0724 HOVERGEN:HBG002295
HOGENOM:HOG000234442 OrthoDB:EOG4HQDKF CTD:3181
GeneTree:ENSGT00700000104376 KO:K13158 OMA:HYSARTS EMBL:AC140791
EMBL:AJ719443 IPI:IPI00651336 RefSeq:NP_001026156.1
UniGene:Gga.22131 SMR:Q5ZME1 IntAct:Q5ZME1 STRING:Q5ZME1
Ensembl:ENSGALT00000017975 GeneID:420627 KEGG:gga:420627
InParanoid:Q5ZME1 NextBio:20823513 Uniprot:Q5ZME1
Length = 349
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 95/183 (51%), Positives = 140/183 (76%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
+E E RKLFIGGL + T+ E+L++++E WG + D VVM+DP +K+SRGFGF+T+SS
Sbjct: 11 REKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAE 70
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A AARPHTID +VVEPKRAV R E +P A TVKKLFVG +++D E L++YF +
Sbjct: 71 VDAAMAARPHTIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEE 130
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G++ ++ ++T++++GKKRGFGFV ++D+DPVDK L+ H + G +V+KALS++EM
Sbjct: 131 YGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQ 190
Query: 183 KLK 185
+++
Sbjct: 191 EVQ 193
>UNIPROTKB|Q9TTV2 [details] [associations]
symbol:HNRNPA2B1 "Heterogeneous nuclear ribonucleoproteins
A2/B1" species:9490 "Saguinus oedipus" [GO:0030529
"ribonucleoprotein complex" evidence=ISS] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005737 GO:GO:0005654 GO:GO:0008380 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0003723
GO:GO:0030529 HOVERGEN:HBG002295 HSSP:P22626 EMBL:AF192348
ProteinModelPortal:Q9TTV2 SMR:Q9TTV2 Uniprot:Q9TTV2
Length = 341
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 94/184 (51%), Positives = 142/184 (77%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
+E E RKLFIGGL ++T+ E+L++++E WG + D VVM+DP +K+SRGFGF+T+SS
Sbjct: 3 REKEQFRKLFIGGLSFQTTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAE 62
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A AARPH+ID +VVEPKRAV R E +P A TVKKLFVG +++D E L++YF +
Sbjct: 63 VDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFAE 122
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G++ ++ ++T++++GKKRGFGFV ++D+DPVDK L+ H + G +V+KALS++EM
Sbjct: 123 YGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQ 182
Query: 183 KLKT 186
++++
Sbjct: 183 EVQS 186
>UNIPROTKB|Q2HJ60 [details] [associations]
symbol:HNRNPA2B1 "Heterogeneous nuclear ribonucleoproteins
A2/B1" species:9913 "Bos taurus" [GO:0030529 "ribonucleoprotein
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0097157 "pre-mRNA
intronic binding" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0050658 "RNA transport"
evidence=IEA] [GO:0048025 "negative regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0043047 "single-stranded
telomeric DNA binding" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005737 GO:GO:0005654
GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0005681 GO:GO:0030529 GO:GO:0097157 GO:GO:0048025
eggNOG:COG0724 HOVERGEN:HBG002295 HOGENOM:HOG000234442
OrthoDB:EOG4HQDKF EMBL:BC113298 IPI:IPI00695201
RefSeq:NP_001039440.1 UniGene:Bt.48137 ProteinModelPortal:Q2HJ60
SMR:Q2HJ60 STRING:Q2HJ60 PRIDE:Q2HJ60 Ensembl:ENSBTAT00000007527
GeneID:507564 KEGG:bta:507564 CTD:3181 GeneTree:ENSGT00700000104376
KO:K13158 OMA:HYSARTS NextBio:20868121 Uniprot:Q2HJ60
Length = 341
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 94/184 (51%), Positives = 141/184 (76%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
+E E RKLFIGGL + T+ E+L++++E WG + D VVM+DP +K+SRGFGF+T+SS
Sbjct: 3 REKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAE 62
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A AARPH+ID +VVEPKRAV R E +P A TVKKLFVG +++D E L++YF +
Sbjct: 63 VDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEE 122
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G++ ++ ++T++++GKKRGFGFV ++D+DPVDK L+ H + G +V+KALS++EM
Sbjct: 123 YGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQ 182
Query: 183 KLKT 186
++++
Sbjct: 183 EVQS 186
>UNIPROTKB|F1Q1K6 [details] [associations]
symbol:HNRNPA2B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104376 OMA:HYSARTS EMBL:AAEX03009384
Ensembl:ENSCAFT00000004622 Uniprot:F1Q1K6
Length = 353
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 94/184 (51%), Positives = 141/184 (76%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
+E E RKLFIGGL + T+ E+L++++E WG + D VVM+DP +K+SRGFGF+T+SS
Sbjct: 15 REKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAE 74
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A AARPH+ID +VVEPKRAV R E +P A TVKKLFVG +++D E L++YF +
Sbjct: 75 VDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEE 134
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G++ ++ ++T++++GKKRGFGFV ++D+DPVDK L+ H + G +V+KALS++EM
Sbjct: 135 YGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQ 194
Query: 183 KLKT 186
++++
Sbjct: 195 EVQS 198
>UNIPROTKB|P22626 [details] [associations]
symbol:HNRNPA2B1 "Heterogeneous nuclear ribonucleoproteins
A2/B1" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0048025 "negative regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0097157 "pre-mRNA intronic
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;TAS] [GO:0006397 "mRNA processing" evidence=IDA]
[GO:0050658 "RNA transport" evidence=IDA] [GO:0043047
"single-stranded telomeric DNA binding" evidence=IDA] [GO:0003723
"RNA binding" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380
"RNA splicing" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005737 GO:GO:0005654 GO:GO:0005730 GO:GO:0000166
Reactome:REACT_1675 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0000398
GO:GO:0071013 GO:GO:0050658 eggNOG:COG0724 GO:GO:0043047
HOVERGEN:HBG002295 HOGENOM:HOG000234442 OrthoDB:EOG4HQDKF
HPA:HPA001666 CTD:3181 KO:K13158 OMA:HYSARTS EMBL:M29064
EMBL:M29065 EMBL:U09123 EMBL:U09120 EMBL:U09121 EMBL:U09122
EMBL:D28877 EMBL:AK289429 IPI:IPI00396378 IPI:IPI00414696
PIR:A56845 RefSeq:NP_002128.1 RefSeq:NP_112533.1 UniGene:Hs.487774
PDB:1X4B PDBsum:1X4B ProteinModelPortal:P22626 SMR:P22626
IntAct:P22626 MINT:MINT-4998934 STRING:P22626 PhosphoSite:P22626
DMDM:133257 REPRODUCTION-2DPAGE:IPI00396378
REPRODUCTION-2DPAGE:IPI00414696 REPRODUCTION-2DPAGE:P22626
SWISS-2DPAGE:P22626 UCD-2DPAGE:P22626 PaxDb:P22626 PRIDE:P22626
Ensembl:ENST00000354667 Ensembl:ENST00000356674
Ensembl:ENST00000360787 GeneID:3181 KEGG:hsa:3181 UCSC:uc003sxr.4
UCSC:uc003sxs.4 GeneCards:GC07M026229 HGNC:HGNC:5033 HPA:CAB012403
MIM:600124 neXtProt:NX_P22626 PharmGKB:PA162391140 PhylomeDB:P22626
ChiTaRS:HNRNPA2B1 EvolutionaryTrace:P22626 GenomeRNAi:3181
NextBio:12622 PMAP-CutDB:P22626 Bgee:P22626 CleanEx:HS_HNRNPA2B1
Genevestigator:P22626 GermOnline:ENSG00000122566 Uniprot:P22626
Length = 353
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 94/184 (51%), Positives = 141/184 (76%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
+E E RKLFIGGL + T+ E+L++++E WG + D VVM+DP +K+SRGFGF+T+SS
Sbjct: 15 REKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAE 74
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A AARPH+ID +VVEPKRAV R E +P A TVKKLFVG +++D E L++YF +
Sbjct: 75 VDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEE 134
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G++ ++ ++T++++GKKRGFGFV ++D+DPVDK L+ H + G +V+KALS++EM
Sbjct: 135 YGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQ 194
Query: 183 KLKT 186
++++
Sbjct: 195 EVQS 198
>UNIPROTKB|Q5RBU8 [details] [associations]
symbol:HNRNPA2B1 "Heterogeneous nuclear ribonucleoproteins
A2/B1" species:9601 "Pongo abelii" [GO:0030529 "ribonucleoprotein
complex" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737
GO:GO:0005654 GO:GO:0008380 GO:GO:0000166 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0003723 GO:GO:0030529
HOVERGEN:HBG002295 CTD:3181 KO:K13158 EMBL:CR858535
RefSeq:NP_001127331.1 UniGene:Pab.19213 HSSP:P22626
ProteinModelPortal:Q5RBU8 SMR:Q5RBU8 PRIDE:Q5RBU8 GeneID:100174392
KEGG:pon:100174392 InParanoid:Q5RBU8 Uniprot:Q5RBU8
Length = 353
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 94/184 (51%), Positives = 141/184 (76%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
+E E RKLFIGGL + T+ E+L++++E WG + D VVM+DP +K+SRGFGF+T+SS
Sbjct: 15 REKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAE 74
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A AARPH+ID +VVEPKRAV R E +P A TVKKLFVG +++D E L++YF +
Sbjct: 75 VDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEE 134
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G++ ++ ++T++++GKKRGFGFV ++D+DPVDK L+ H + G +V+KALS++EM
Sbjct: 135 YGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKHHTINGHNAEVRKALSRQEMQ 194
Query: 183 KLKT 186
++++
Sbjct: 195 EVQS 198
>MGI|MGI:104819 [details] [associations]
symbol:Hnrnpa2b1 "heterogeneous nuclear ribonucleoprotein
A2/B1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=ISO] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397
"mRNA processing" evidence=ISO] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=ISO]
[GO:0043047 "single-stranded telomeric DNA binding" evidence=ISO]
[GO:0048025 "negative regulation of mRNA splicing, via spliceosome"
evidence=IMP;IDA] [GO:0050658 "RNA transport" evidence=ISO]
[GO:0071013 "catalytic step 2 spliceosome" evidence=ISO]
[GO:0097157 "pre-mRNA intronic binding" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 MGI:MGI:104819 GO:GO:0005737 GO:GO:0005654
GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0005681 GO:GO:0097157 GO:GO:0050658 GO:GO:0048025
eggNOG:COG0724 GO:GO:0043047 HOVERGEN:HBG002295 OrthoDB:EOG4HQDKF
CTD:3181 GeneTree:ENSGT00700000104376 KO:K13158 OMA:HYSARTS
ChiTaRS:HNRNPA2B1 EMBL:AF406651 EMBL:AF452567 EMBL:AF073990
EMBL:AF073993 EMBL:AK089012 EMBL:AK137214 EMBL:BC059107
EMBL:BC141253 IPI:IPI00405058 IPI:IPI00622847 IPI:IPI00828488
RefSeq:NP_058086.2 RefSeq:NP_872591.1 RefSeq:XP_001473875.2
UniGene:Mm.155896 ProteinModelPortal:O88569 SMR:O88569
IntAct:O88569 STRING:O88569 PhosphoSite:O88569
REPRODUCTION-2DPAGE:IPI00405058 REPRODUCTION-2DPAGE:O88569
SWISS-2DPAGE:O88569 PaxDb:O88569 PRIDE:O88569
Ensembl:ENSMUST00000069949 Ensembl:ENSMUST00000090002
Ensembl:ENSMUST00000114459 GeneID:100045191 GeneID:53379
KEGG:mmu:100045191 KEGG:mmu:53379 UCSC:uc009bxm.1 UCSC:uc009bxn.1
NextBio:458663 Bgee:O88569 CleanEx:MM_HNRNPA2B1
Genevestigator:O88569 GermOnline:ENSMUSG00000004980 Uniprot:O88569
Length = 353
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 94/184 (51%), Positives = 141/184 (76%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
+E E RKLFIGGL + T+ E+L++++E WG + D VVM+DP +K+SRGFGF+T+SS
Sbjct: 15 REKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAE 74
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A AARPH+ID +VVEPKRAV R E +P A TVKKLFVG +++D E L++YF +
Sbjct: 75 VDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEE 134
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G++ ++ ++T++++GKKRGFGFV ++D+DPVDK L+ H + G +V+KALS++EM
Sbjct: 135 YGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQ 194
Query: 183 KLKT 186
++++
Sbjct: 195 EVQS 198
>UNIPROTKB|F1LM82 [details] [associations]
symbol:Hnrnpa2b1 "Heterogeneous nuclear ribonucleoproteins
A2/B1" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 RGD:1310403 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662 Pfam:PF11627
GeneTree:ENSGT00700000104376 IPI:IPI00923129
Ensembl:ENSRNOT00000015325 ArrayExpress:F1LM82 Uniprot:F1LM82
Length = 312
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 94/184 (51%), Positives = 141/184 (76%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
+E E RKLFIGGL + T+ E+L++++E WG + D VVM+DP +K+SRGFGF+T+SS
Sbjct: 14 REKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAE 73
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A AARPH+ID +VVEPKRAV R E +P A TVKKLFVG +++D E L++YF +
Sbjct: 74 VDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEE 133
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G++ ++ ++T++++GKKRGFGFV ++D+DPVDK L+ H + G +V+KALS++EM
Sbjct: 134 YGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQ 193
Query: 183 KLKT 186
++++
Sbjct: 194 EVQS 197
>UNIPROTKB|F1LNF1 [details] [associations]
symbol:Hnrnpa2b1 "Heterogeneous nuclear ribonucleoproteins
A2/B1" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:1310403
GO:GO:0005730 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0071013 GO:GO:0050658 GO:GO:0043047
GeneTree:ENSGT00700000104376 OMA:HYSARTS IPI:IPI00867934
ProteinModelPortal:F1LNF1 Ensembl:ENSRNOT00000015152
ArrayExpress:F1LNF1 Uniprot:F1LNF1
Length = 352
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 94/184 (51%), Positives = 141/184 (76%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
+E E RKLFIGGL + T+ E+L++++E WG + D VVM+DP +K+SRGFGF+T+SS
Sbjct: 14 REKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAE 73
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A AARPH+ID +VVEPKRAV R E +P A TVKKLFVG +++D E L++YF +
Sbjct: 74 VDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEE 133
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G++ ++ ++T++++GKKRGFGFV ++D+DPVDK L+ H + G +V+KALS++EM
Sbjct: 134 YGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQ 193
Query: 183 KLKT 186
++++
Sbjct: 194 EVQS 197
>UNIPROTKB|Q28521 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9544 "Macaca mulatta" [GO:0030529 "ribonucleoprotein
complex" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737
GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0005681 GO:GO:0003723 GO:GO:0030529 GO:GO:0051028
eggNOG:COG0724 HOVERGEN:HBG002295 HOGENOM:HOG000234442 KO:K12741
OrthoDB:EOG4HQDKF InterPro:IPR021662 Pfam:PF11627 CTD:3178
EMBL:M84334 PIR:S30192 RefSeq:NP_001036248.1 UniGene:Mmu.4980
ProteinModelPortal:Q28521 SMR:Q28521 STRING:Q28521 PRIDE:Q28521
GeneID:702977 KEGG:mcc:702977 InParanoid:Q28521 NextBio:19966247
Uniprot:Q28521
Length = 320
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 97/180 (53%), Positives = 134/180 (74%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFIGGL + T+ E+L+SHFE WG + D VVM+DP TK+SRGFGF+TY++
Sbjct: 8 KEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEK 67
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARPH +D +VVEPKRAV R + RP A TVKK+FVG +++D E L++YF Q
Sbjct: 68 VDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQ 127
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G++ + ++T++ +GKKRGF FV ++D++ VDK ++ H V G +V+KALSK+EMA
Sbjct: 128 YGKIEVIEIMTDRGSGKKRGFAFVTFDDHNSVDKIVIQKYHTVNGHNCEVRKALSKQEMA 187
Score = 163 (62.4 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 32/88 (36%), Positives = 53/88 (60%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ ++KLF+G L + T+E L+ +F Q+G +T ++ + T + RGFGFV Y +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEE 180
VD A H V G+ V+ K+A+S+E+
Sbjct: 67 KVDAAMNARPHKVDGRVVEPKRAVSRED 94
>RGD|1310403 [details] [associations]
symbol:Hnrnpa2b1 "heterogeneous nuclear ribonucleoprotein A2/B1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA;ISO]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=ISO;ISS] [GO:0043047
"single-stranded telomeric DNA binding" evidence=IEA;ISO]
[GO:0048025 "negative regulation of mRNA splicing, via spliceosome"
evidence=IEA;ISO] [GO:0050658 "RNA transport" evidence=IEA;ISO]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA;ISO]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 RGD:1310403 GO:GO:0005737 GO:GO:0005654 GO:GO:0005730
GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0030529 GO:GO:0071013 GO:GO:0050658
eggNOG:COG0724 GO:GO:0043047 HOGENOM:HOG000234442 OrthoDB:EOG4HQDKF
CTD:3181 KO:K13158 EMBL:AB006815 EMBL:AB006816 EMBL:AB006817
EMBL:AB006818 IPI:IPI00212969 IPI:IPI00867934 IPI:IPI00923129
IPI:IPI00923135 RefSeq:NP_001098083.1 UniGene:Rn.231911
ProteinModelPortal:A7VJC2 SMR:A7VJC2 STRING:A7VJC2 PRIDE:A7VJC2
GeneID:362361 KEGG:rno:362361 UCSC:RGD:1310403 HOVERGEN:HBG108415
InParanoid:A7VJC2 NextBio:679650 ArrayExpress:A7VJC2
Genevestigator:A7VJC2 Uniprot:A7VJC2
Length = 353
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 94/184 (51%), Positives = 141/184 (76%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
+E E RKLFIGGL + T+ E+L++++E WG + D VVM+DP +K+SRGFGF+T+SS
Sbjct: 15 REKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAE 74
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A AARPH+ID +VVEPKRAV R E +P A TVKKLFVG +++D E L++YF +
Sbjct: 75 VDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEE 134
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G++ ++ ++T++++GKKRGFGFV ++D+DPVDK L+ H + G +V+KALS++EM
Sbjct: 135 YGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIFLQKYHTINGHNAEVRKALSRQEMQ 194
Query: 183 KLKT 186
++++
Sbjct: 195 EVQS 198
>RGD|69234 [details] [associations]
symbol:Hnrnpa1 "heterogeneous nuclear ribonucleoprotein A1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000380 "alternative mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003697 "single-stranded DNA binding"
evidence=ISO;ISS;TAS] [GO:0003723 "RNA binding" evidence=TAS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=ISO;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISO]
[GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0030529
"ribonucleoprotein complex" evidence=ISO;ISS] [GO:0045111
"intermediate filament cytoskeleton" evidence=ISO] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0051168 "nuclear export"
evidence=ISO;ISS] [GO:0051170 "nuclear import" evidence=ISO;ISS]
[GO:0071013 "catalytic step 2 spliceosome" evidence=ISO]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 RGD:69234 GO:GO:0005737 GO:GO:0005654 GO:GO:0008380
GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0005681
GO:GO:0003723 GO:GO:0003697 GO:GO:0016070 GO:GO:0051028
GO:GO:0051168 eggNOG:COG0724 HOVERGEN:HBG002295 GO:GO:0051170
HOGENOM:HOG000234442 KO:K12741 InterPro:IPR021662 Pfam:PF11627
CTD:3178 EMBL:M12156 IPI:IPI00421500 PIR:A38304 RefSeq:NP_058944.1
UniGene:Rn.25771 ProteinModelPortal:P04256 SMR:P04256 IntAct:P04256
STRING:P04256 PhosphoSite:P04256 PRIDE:P04256 GeneID:29578
KEGG:rno:29578 UCSC:RGD:69234 NextBio:609678 ArrayExpress:P04256
Genevestigator:P04256 GermOnline:ENSRNOG00000036839 Uniprot:P04256
Length = 320
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 97/180 (53%), Positives = 133/180 (73%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFIGGL + T+ E+L+SHFE WG + D VVM+DP TK+SRGFGF+TY++
Sbjct: 8 KEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE 67
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARPH +D +VVEPKRAV R + RP A TVKK+FVG +++D E L++YF Q
Sbjct: 68 VDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQ 127
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G++ + ++T++ +GKKRGF FV ++D+D VDK ++ H V G +V+KAL K+EMA
Sbjct: 128 YGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALCKQEMA 187
Score = 163 (62.4 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 32/88 (36%), Positives = 53/88 (60%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ ++KLF+G L + T+E L+ +F Q+G +T ++ + T + RGFGFV Y +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEE 180
VD A H V G+ V+ K+A+S+E+
Sbjct: 67 EVDAAMNARPHKVDGRVVEPKRAVSRED 94
>UNIPROTKB|F1RX74 [details] [associations]
symbol:HNRNPA2B1 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0050658 "RNA transport" evidence=IEA] [GO:0048025 "negative
regulation of mRNA splicing, via spliceosome" evidence=IEA]
[GO:0043047 "single-stranded telomeric DNA binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005730 GO:GO:0000166 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0071013 GO:GO:0050658
GO:GO:0043047 GeneTree:ENSGT00700000104376 OMA:HYSARTS
EMBL:CU469303 Ensembl:ENSSSCT00000017244 Uniprot:F1RX74
Length = 353
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 94/184 (51%), Positives = 140/184 (76%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
+E E RKLFIGGL + T+ E+L++++E WG + D VVM+DP +K+SRGFGF+T+SS
Sbjct: 15 REKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAE 74
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A AARPH+ID +VVEPKRAV R E +P A TVKKLFVG +++D E L++YF +
Sbjct: 75 VDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEE 134
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G+V ++ ++T++++GKKRGFGF ++D+DPVDK L+ H + G +V+KALS++EM
Sbjct: 135 YGKVDTIEIITDRQSGKKRGFGFFTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQ 194
Query: 183 KLKT 186
++++
Sbjct: 195 EVQS 198
>UNIPROTKB|E1BZE6 [details] [associations]
symbol:LOC100859627 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005730
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0071013
GeneTree:ENSGT00700000104376 OMA:QGHDPKE EMBL:AADN02020007
EMBL:AADN02020008 EMBL:AADN02020009 EMBL:AADN02020010
EMBL:AADN02020011 EMBL:AADN02020012 EMBL:AADN02020013
IPI:IPI00812068 ProteinModelPortal:E1BZE6
Ensembl:ENSGALT00000038715 Uniprot:E1BZE6
Length = 380
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 95/179 (53%), Positives = 135/179 (75%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFIGGL + T+ ++L+ HFE WG + D VVM+DPQTK+SRGFGF+TYS
Sbjct: 27 KEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEE 86
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A +ARPH +D +VVEPKRAV R + +P A TVKK+FVG +++D E +L+EYF +
Sbjct: 87 VDAAMSARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLREYFEK 146
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEM 181
+G++ ++ ++ ++++GKKRGF FV ++D+D VDK ++ H + G +VKKALSK+EM
Sbjct: 147 YGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEM 205
Score = 172 (65.6 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 36/110 (32%), Positives = 67/110 (60%)
Query: 75 DSKVVEPKRAVPRT-EINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVT 133
+ +V + KR R+ + + P+ ++KLF+G L + T++ L+E+F ++G +T ++
Sbjct: 7 EREVEDYKRKGRRSSQGHEPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMR 66
Query: 134 EKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMAK 183
+ +T + RGFGFV Y+ + VD A H V G+ V+ K+A+S+E+ K
Sbjct: 67 DPQTKRSRGFGFVTYSCVEEVDAAMSARPHKVDGRVVEPKRAVSREDSVK 116
>UNIPROTKB|F1NBB6 [details] [associations]
symbol:LOC100859627 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 GeneTree:ENSGT00700000104376 EMBL:AADN02020007
EMBL:AADN02020008 EMBL:AADN02020009 EMBL:AADN02020010
EMBL:AADN02020011 EMBL:AADN02020012 EMBL:AADN02020013
IPI:IPI00818847 Ensembl:ENSGALT00000029498 Uniprot:F1NBB6
Length = 310
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 95/179 (53%), Positives = 135/179 (75%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFIGGL + T+ ++L+ HFE WG + D VVM+DPQTK+SRGFGF+TYS
Sbjct: 15 KEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEE 74
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A +ARPH +D +VVEPKRAV R + +P A TVKK+FVG +++D E +L+EYF +
Sbjct: 75 VDAAMSARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLREYFEK 134
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEM 181
+G++ ++ ++ ++++GKKRGF FV ++D+D VDK ++ H + G +VKKALSK+EM
Sbjct: 135 YGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEM 193
Score = 170 (64.9 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 32/93 (34%), Positives = 58/93 (62%)
Query: 91 NRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYND 150
+ P+ ++KLF+G L + T++ L+E+F ++G +T ++ + +T + RGFGFV Y+
Sbjct: 12 HEPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSC 71
Query: 151 YDPVDKACLKGTHLVKGKKVDVKKALSKEEMAK 183
+ VD A H V G+ V+ K+A+S+E+ K
Sbjct: 72 VEEVDAAMSARPHKVDGRVVEPKRAVSREDSVK 104
>UNIPROTKB|F1P5I0 [details] [associations]
symbol:LOC100859627 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 GeneTree:ENSGT00700000104376 EMBL:AADN02020007
EMBL:AADN02020008 EMBL:AADN02020009 EMBL:AADN02020010
EMBL:AADN02020011 EMBL:AADN02020012 EMBL:AADN02020013
IPI:IPI00971390 Ensembl:ENSGALT00000015053 Uniprot:F1P5I0
Length = 288
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 95/179 (53%), Positives = 135/179 (75%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFIGGL + T+ ++L+ HFE WG + D VVM+DPQTK+SRGFGF+TYS
Sbjct: 3 KEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEE 62
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A +ARPH +D +VVEPKRAV R + +P A TVKK+FVG +++D E +L+EYF +
Sbjct: 63 VDAAMSARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLREYFEK 122
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEM 181
+G++ ++ ++ ++++GKKRGF FV ++D+D VDK ++ H + G +VKKALSK+EM
Sbjct: 123 YGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEM 181
Score = 169 (64.5 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 32/91 (35%), Positives = 57/91 (62%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ ++KLF+G L + T++ L+E+F ++G +T ++ + +T + RGFGFV Y+ +
Sbjct: 2 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 61
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEEMAK 183
VD A H V G+ V+ K+A+S+E+ K
Sbjct: 62 EVDAAMSARPHKVDGRVVEPKRAVSREDSVK 92
>UNIPROTKB|Q32P51 [details] [associations]
symbol:HNRNPA1L2 "Heterogeneous nuclear ribonucleoprotein
A1-like 2" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0000380 "alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005737 GO:GO:0008380
GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0005681
GO:GO:0003723 GO:GO:0051028 eggNOG:COG0724 HSSP:Q61474
EMBL:CH471124 EMBL:AK123159 EMBL:AL137058 EMBL:BC108266
IPI:IPI00879501 RefSeq:NP_001011724.1 RefSeq:NP_001011725.1
UniGene:Hs.447506 ProteinModelPortal:Q32P51 SMR:Q32P51
IntAct:Q32P51 STRING:Q32P51 PhosphoSite:Q32P51 DMDM:190356061
PaxDb:Q32P51 PRIDE:Q32P51 Ensembl:ENST00000342657
Ensembl:ENST00000357495 Ensembl:ENST00000398039 GeneID:144983
KEGG:hsa:144983 UCSC:uc001vgx.1 CTD:144983 GeneCards:GC13P053192
HGNC:HGNC:27067 neXtProt:NX_Q32P51 PharmGKB:PA164720701
HOGENOM:HOG000234442 InParanoid:Q32P51 KO:K12741 OMA:HYGSIVD
OrthoDB:EOG4HQDKF GenomeRNAi:144983 NextBio:85023 Bgee:Q32P51
Genevestigator:Q32P51 InterPro:IPR021662 Pfam:PF11627
Uniprot:Q32P51
Length = 320
Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 96/180 (53%), Positives = 132/180 (73%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFIGGL + T+ E+L+SHFE WG + D VVM+DP TK+SRGFGF+TY++
Sbjct: 8 KEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE 67
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A PH +D +VVEPKRAV R + RP A TVKK+FVG +++D E L++YF Q
Sbjct: 68 VDAAMNTTPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQ 127
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G++ + ++T++ +GKKRGF FV ++D+D VDK ++ H VKG +V+KAL K+EMA
Sbjct: 128 YGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVKGHNCEVRKALPKQEMA 187
Score = 163 (62.4 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 32/88 (36%), Positives = 53/88 (60%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ ++KLF+G L + T+E L+ +F Q+G +T ++ + T + RGFGFV Y +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEE 180
VD A H V G+ V+ K+A+S+E+
Sbjct: 67 EVDAAMNTTPHKVDGRVVEPKRAVSRED 94
>UNIPROTKB|E1BEG2 [details] [associations]
symbol:HNRNPA3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104376 OMA:QGHDPKE EMBL:DAAA02004160
IPI:IPI00690667 Ensembl:ENSBTAT00000028757 Uniprot:E1BEG2
Length = 380
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 94/179 (52%), Positives = 134/179 (74%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFIGGL + T+ ++L+ HFE WG + D VVM+DPQTK+SRGFGF+TYS
Sbjct: 29 KEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEE 88
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARPH +D +VVEPKRAV R + +P A TVKK+FVG +++D E +L++YF +
Sbjct: 89 VDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEK 148
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEM 181
+G++ ++ ++ ++++GKKRGF FV ++D+D VDK ++ H + G +VKKALSK+EM
Sbjct: 149 YGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEM 207
Score = 170 (64.9 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 32/91 (35%), Positives = 57/91 (62%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ ++KLF+G L + T++ L+E+F ++G +T ++ + +T + RGFGFV Y+ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEEMAK 183
VD A H V G+ V+ K+A+S+E+ K
Sbjct: 88 EVDAAMCARPHKVDGRVVEPKRAVSREDSVK 118
>UNIPROTKB|E2RFV7 [details] [associations]
symbol:HNRNPA3 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
KO:K12741 GeneTree:ENSGT00700000104376 CTD:220988 OMA:QGHDPKE
EMBL:AAEX03017802 RefSeq:XP_543761.2 ProteinModelPortal:E2RFV7
Ensembl:ENSCAFT00000021410 GeneID:608074 KEGG:cfa:608074
Uniprot:E2RFV7
Length = 378
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 94/179 (52%), Positives = 134/179 (74%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFIGGL + T+ ++L+ HFE WG + D VVM+DPQTK+SRGFGF+TYS
Sbjct: 29 KEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEE 88
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARPH +D +VVEPKRAV R + +P A TVKK+FVG +++D E +L++YF +
Sbjct: 89 VDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEK 148
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEM 181
+G++ ++ ++ ++++GKKRGF FV ++D+D VDK ++ H + G +VKKALSK+EM
Sbjct: 149 YGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEM 207
Score = 170 (64.9 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 32/91 (35%), Positives = 57/91 (62%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ ++KLF+G L + T++ L+E+F ++G +T ++ + +T + RGFGFV Y+ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEEMAK 183
VD A H V G+ V+ K+A+S+E+ K
Sbjct: 88 EVDAAMCARPHKVDGRVVEPKRAVSREDSVK 118
>UNIPROTKB|E7EWI9 [details] [associations]
symbol:HNRNPA3 "Heterogeneous nuclear ribonucleoprotein A3"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005730 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC079305 HGNC:HGNC:24941
ChiTaRS:HNRNPA3 IPI:IPI00939124 ProteinModelPortal:E7EWI9
SMR:E7EWI9 Ensembl:ENST00000416446 ArrayExpress:E7EWI9 Bgee:E7EWI9
Uniprot:E7EWI9
Length = 322
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 94/179 (52%), Positives = 134/179 (74%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFIGGL + T+ ++L+ HFE WG + D VVM+DPQTK+SRGFGF+TYS
Sbjct: 7 KEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEE 66
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARPH +D +VVEPKRAV R + +P A TVKK+FVG +++D E +L++YF +
Sbjct: 67 VDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEK 126
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEM 181
+G++ ++ ++ ++++GKKRGF FV ++D+D VDK ++ H + G +VKKALSK+EM
Sbjct: 127 YGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEM 185
Score = 170 (64.9 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 32/91 (35%), Positives = 57/91 (62%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ ++KLF+G L + T++ L+E+F ++G +T ++ + +T + RGFGFV Y+ +
Sbjct: 6 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 65
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEEMAK 183
VD A H V G+ V+ K+A+S+E+ K
Sbjct: 66 EVDAAMCARPHKVDGRVVEPKRAVSREDSVK 96
>UNIPROTKB|P51991 [details] [associations]
symbol:HNRNPA3 "Heterogeneous nuclear ribonucleoprotein A3"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0030529
"ribonucleoprotein complex" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] Reactome:REACT_71
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005654 GO:GO:0005730 GO:GO:0000166
Reactome:REACT_1675 Gene3D:3.30.70.330 GO:GO:0003723 EMBL:CH471058
GO:GO:0000398 GO:GO:0071013 eggNOG:COG0724 HOVERGEN:HBG002295
EMBL:AC079305 HOGENOM:HOG000234442 KO:K12741 OrthoDB:EOG4HQDKF
HPA:HPA001666 EMBL:AY363225 EMBL:BC112027 EMBL:BC113470
IPI:IPI00419373 IPI:IPI00455134 PIR:I52962 RefSeq:NP_919223.1
UniGene:Hs.516539 ProteinModelPortal:P51991 SMR:P51991
IntAct:P51991 MINT:MINT-4999802 STRING:P51991 PhosphoSite:P51991
DMDM:51338779 PaxDb:P51991 PRIDE:P51991 Ensembl:ENST00000392524
Ensembl:ENST00000411529 Ensembl:ENST00000435711 GeneID:220988
KEGG:hsa:220988 UCSC:uc002ulb.1 CTD:220988 GeneCards:GC02P178077
HGNC:HGNC:24941 MIM:605372 neXtProt:NX_P51991 PharmGKB:PA162391169
InParanoid:P51991 OMA:QGHDPKE PhylomeDB:P51991 ChiTaRS:HNRNPA3
GenomeRNAi:220988 NextBio:91133 PMAP-CutDB:P51991
ArrayExpress:P51991 Bgee:P51991 CleanEx:HS_HNRNPA3
Genevestigator:P51991 GermOnline:ENSG00000170144 Uniprot:P51991
Length = 378
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 94/179 (52%), Positives = 134/179 (74%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFIGGL + T+ ++L+ HFE WG + D VVM+DPQTK+SRGFGF+TYS
Sbjct: 29 KEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEE 88
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARPH +D +VVEPKRAV R + +P A TVKK+FVG +++D E +L++YF +
Sbjct: 89 VDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEK 148
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEM 181
+G++ ++ ++ ++++GKKRGF FV ++D+D VDK ++ H + G +VKKALSK+EM
Sbjct: 149 YGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEM 207
Score = 170 (64.9 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 32/91 (35%), Positives = 57/91 (62%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ ++KLF+G L + T++ L+E+F ++G +T ++ + +T + RGFGFV Y+ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEEMAK 183
VD A H V G+ V+ K+A+S+E+ K
Sbjct: 88 EVDAAMCARPHKVDGRVVEPKRAVSREDSVK 118
>UNIPROTKB|F2Z5B4 [details] [associations]
symbol:HNRNPA3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005730 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0071013 KO:K12741
GeneTree:ENSGT00700000104376 OMA:QGHDPKE EMBL:CU862048
RefSeq:XP_003133549.1 ProteinModelPortal:F2Z5B4 SMR:F2Z5B4
Ensembl:ENSSSCT00000017409 GeneID:100516520 KEGG:ssc:100516520
Uniprot:F2Z5B4
Length = 379
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 94/179 (52%), Positives = 134/179 (74%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFIGGL + T+ ++L+ HFE WG + D VVM+DPQTK+SRGFGF+TYS
Sbjct: 29 KEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEE 88
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARPH +D +VVEPKRAV R + +P A TVKK+FVG +++D E +L++YF +
Sbjct: 89 VDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEK 148
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEM 181
+G++ ++ ++ ++++GKKRGF FV ++D+D VDK ++ H + G +VKKALSK+EM
Sbjct: 149 YGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEM 207
Score = 170 (64.9 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 32/91 (35%), Positives = 57/91 (62%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ ++KLF+G L + T++ L+E+F ++G +T ++ + +T + RGFGFV Y+ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEEMAK 183
VD A H V G+ V+ K+A+S+E+ K
Sbjct: 88 EVDAAMCARPHKVDGRVVEPKRAVSREDSVK 118
>RGD|2321074 [details] [associations]
symbol:LOC100360986 "mCG1035404-like" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:2321074 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
OrthoDB:EOG4HQDKF InterPro:IPR021662 Pfam:PF11627 IPI:IPI00559028
PRIDE:D4ACQ0 Ensembl:ENSRNOT00000002122 UCSC:RGD:2321074
ArrayExpress:D4ACQ0 Uniprot:D4ACQ0
Length = 320
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 94/179 (52%), Positives = 134/179 (74%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFIGGL + T+ ++L+ HFE WG + D VVM+DPQTK+SRGFGF+TYS
Sbjct: 29 KEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEE 88
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARPH +D +VVEPKRAV R + +P A TVKK+FVG +++D E +L++YF +
Sbjct: 89 VDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEK 148
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEM 181
+G++ ++ ++ ++++GKKRGF FV ++D+D VDK ++ H + G +VKKALSK+EM
Sbjct: 149 YGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEM 207
Score = 170 (64.9 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 32/91 (35%), Positives = 57/91 (62%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ ++KLF+G L + T++ L+E+F ++G +T ++ + +T + RGFGFV Y+ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEEMAK 183
VD A H V G+ V+ K+A+S+E+ K
Sbjct: 88 EVDAAMCARPHKVDGRVVEPKRAVSREDSVK 118
>RGD|727807 [details] [associations]
symbol:Hnrnpa3 "heterogeneous nuclear ribonucleoprotein A3"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IMP] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0035770
"ribonucleoprotein granule" evidence=IDA] [GO:0043005 "neuron
projection" evidence=IDA] [GO:0051028 "mRNA transport"
evidence=IMP] [GO:0051033 "RNA transmembrane transporter activity"
evidence=IMP] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 RGD:727807 GO:GO:0005634
GO:GO:0005737 GO:GO:0008380 GO:GO:0000166 GO:GO:0003729
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0043005 GO:GO:0005681
GO:GO:0051028 eggNOG:COG0724 HOVERGEN:HBG002295
HOGENOM:HOG000234442 KO:K12741 OrthoDB:EOG4HQDKF CTD:220988
EMBL:AY363226 EMBL:AY363227 EMBL:BC081878 IPI:IPI00382376
IPI:IPI00464458 RefSeq:NP_001104764.1 RefSeq:NP_001104765.1
RefSeq:NP_937765.1 UniGene:Rn.107690 UniGene:Rn.99947
ProteinModelPortal:Q6URK4 SMR:Q6URK4 STRING:Q6URK4
PhosphoSite:Q6URK4 PRIDE:Q6URK4 GeneID:362152 KEGG:rno:362152
UCSC:RGD:727807 InParanoid:Q6URK4 NextBio:678824
ArrayExpress:Q6URK4 Genevestigator:Q6URK4 GO:GO:0035770
GO:GO:0051033 Uniprot:Q6URK4
Length = 379
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 94/179 (52%), Positives = 134/179 (74%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFIGGL + T+ ++L+ HFE WG + D VVM+DPQTK+SRGFGF+TYS
Sbjct: 29 KEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEE 88
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARPH +D +VVEPKRAV R + +P A TVKK+FVG +++D E +L++YF +
Sbjct: 89 VDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEK 148
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEM 181
+G++ ++ ++ ++++GKKRGF FV ++D+D VDK ++ H + G +VKKALSK+EM
Sbjct: 149 YGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEM 207
Score = 170 (64.9 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 32/91 (35%), Positives = 57/91 (62%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ ++KLF+G L + T++ L+E+F ++G +T ++ + +T + RGFGFV Y+ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEEMAK 183
VD A H V G+ V+ K+A+S+E+ K
Sbjct: 88 EVDAAMCARPHKVDGRVVEPKRAVSREDSVK 118
>UNIPROTKB|F1LNG4 [details] [associations]
symbol:Hnrnpa3 "Heterogeneous nuclear ribonucleoprotein A3"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
IPI:IPI00567786 Ensembl:ENSRNOT00000050735 ArrayExpress:F1LNG4
Uniprot:F1LNG4
Length = 357
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 94/179 (52%), Positives = 134/179 (74%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFIGGL + T+ ++L+ HFE WG + D VVM+DPQTK+SRGFGF+TYS
Sbjct: 7 KEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEE 66
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARPH +D +VVEPKRAV R + +P A TVKK+FVG +++D E +L++YF +
Sbjct: 67 VDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEK 126
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEM 181
+G++ ++ ++ ++++GKKRGF FV ++D+D VDK ++ H + G +VKKALSK+EM
Sbjct: 127 YGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEM 185
Score = 170 (64.9 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 32/91 (35%), Positives = 57/91 (62%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ ++KLF+G L + T++ L+E+F ++G +T ++ + +T + RGFGFV Y+ +
Sbjct: 6 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 65
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEEMAK 183
VD A H V G+ V+ K+A+S+E+ K
Sbjct: 66 EVDAAMCARPHKVDGRVVEPKRAVSREDSVK 96
>ZFIN|ZDB-GENE-030912-14 [details] [associations]
symbol:hnrnpa1 "heterogeneous nuclear
ribonucleoprotein A1" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030912-14 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529 eggNOG:COG0724
HSSP:P09651 HOVERGEN:HBG002295 HOGENOM:HOG000234442 KO:K12741
OrthoDB:EOG4HQDKF CTD:3178 EMBL:BC044442 IPI:IPI00500189
RefSeq:NP_956398.1 UniGene:Dr.67768 ProteinModelPortal:Q803K3
SMR:Q803K3 STRING:Q803K3 PRIDE:Q803K3 GeneID:378453 KEGG:dre:378453
InParanoid:Q803K3 NextBio:20813776 ArrayExpress:Q803K3 Bgee:Q803K3
Uniprot:Q803K3
Length = 422
Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
Identities = 95/180 (52%), Positives = 133/180 (73%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
+EPE LRKLFIGGL + T+ ++L++HFE WG + D VVMKDP TK+SRGFGF+TYSS
Sbjct: 27 REPEQLRKLFIGGLSFETTDDSLRAHFEQWGTLTDCVVMKDPNTKRSRGFGFVTYSSVDE 86
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
V+ + ARPH +D ++VEPKRAV R + ++P A TVKK+FVG ++DD E L++YF Q
Sbjct: 87 VNASMDARPHKVDGRLVEPKRAVSREDSSKPFAHTTVKKIFVGGIKDDTEENHLRDYFDQ 146
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
FG++ V ++ + +TG KRGF FV ++D+D VD+ ++ H V G +V+KALSK+EMA
Sbjct: 147 FGKIEVVEIMVDHKTGNKRGFAFVTFDDHDSVDRIVIQKYHTVNGHNCEVRKALSKQEMA 206
Score = 164 (62.8 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 36/106 (33%), Positives = 61/106 (57%)
Query: 85 VPRTEI-------NRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKET 137
V RTEI +P ++KLF+G L + T++ L+ +F Q+G +T ++ + T
Sbjct: 11 VARTEIVGRMSKEGQPREPEQLRKLFIGGLSFETTDDSLRAHFEQWGTLTDCVVMKDPNT 70
Query: 138 GKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMAK 183
+ RGFGFV Y+ D V+ + H V G+ V+ K+A+S+E+ +K
Sbjct: 71 KRSRGFGFVTYSSVDEVNASMDARPHKVDGRLVEPKRAVSREDSSK 116
>UNIPROTKB|F1M2S4 [details] [associations]
symbol:F1M2S4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00951465
ProteinModelPortal:F1M2S4 Ensembl:ENSRNOT00000050715 Uniprot:F1M2S4
Length = 208
Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
Identities = 97/180 (53%), Positives = 132/180 (73%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE L KLFIGGL ++T+ E+L+SHFE WG + D VVM+DP TK+SRGFGF+TY++
Sbjct: 1 KEPEQLLKLFIGGLSFKTTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE 60
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARPH +D +VVEPKRAV R + RP A TVKK+FVG +D E L++YF Q
Sbjct: 61 VDAAMNARPHKVDGRVVEPKRAVSREDSRRPGAHLTVKKIFVG---EDTEEHHLRDYFEQ 117
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G++ + ++T++ +GKKRGF FV ++D+D VDK ++ H V G +V+KALSK+EMA
Sbjct: 118 YGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMA 177
>UNIPROTKB|F1M460 [details] [associations]
symbol:F1M460 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00569538
ProteinModelPortal:F1M460 Ensembl:ENSRNOT00000043465
ArrayExpress:F1M460 Uniprot:F1M460
Length = 224
Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
Identities = 93/180 (51%), Positives = 133/180 (73%)
Query: 2 TKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAH 61
+KEPE LRKL IGGL + T+ ++L+ HFE WG + D VVM+DPQTK+SRGFGF+TYS
Sbjct: 1 SKEPEQLRKLLIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 60
Query: 62 MVDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFG 121
VD A ARPH +D +VVEPKRAV R + +P A TVKK+FVG +++D E +L++YF
Sbjct: 61 EVDAAVCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFE 120
Query: 122 QFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEM 181
++G++ ++ ++ + ++GKKRGF FV ++D+D VDK + H++ G +VKKALSK+EM
Sbjct: 121 KYGKIETIEVMEDSQSGKKRGFAFVTFDDHDTVDKIVDQKYHIINGHNCEVKKALSKQEM 180
Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 30/85 (35%), Positives = 54/85 (63%)
Query: 99 VKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKAC 158
++KL +G L + T++ L+E+F ++G +T ++ + +T + RGFGFV Y+ + VD A
Sbjct: 7 LRKLLIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAV 66
Query: 159 LKGTHLVKGKKVDVKKALSKEEMAK 183
H V G+ V+ K+A+S+E+ K
Sbjct: 67 CARPHKVDGRVVEPKRAVSREDSVK 91
>UNIPROTKB|D4A6A2 [details] [associations]
symbol:D4A6A2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00949070
ProteinModelPortal:D4A6A2 Ensembl:ENSRNOT00000035567 Uniprot:D4A6A2
Length = 232
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 93/179 (51%), Positives = 134/179 (74%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFIGGL + T+ ++L+ HF+ WG + D VVM+DPQTK+SRGFGF+TYS
Sbjct: 7 KEPEQLRKLFIGGLSFETTDDSLREHFQKWGTLTDCVVMRDPQTKRSRGFGFVTYSCEE- 65
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARPH +D +VVEPKRAV R + +P A TVKK+FVG +++D E +L++YF +
Sbjct: 66 VDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTGEYNLRDYFEK 125
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEM 181
+G++ ++ ++ ++++GKKRGF FV ++D+D VDK ++ H + G +VKKALSK+EM
Sbjct: 126 YGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEM 184
Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 32/91 (35%), Positives = 57/91 (62%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ ++KLF+G L + T++ L+E+F ++G +T ++ + +T + RGFGFV Y+ +
Sbjct: 6 PKEPEQLRKLFIGGLSFETTDDSLREHFQKWGTLTDCVVMRDPQTKRSRGFGFVTYS-CE 64
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEEMAK 183
VD A H V G+ V+ K+A+S+E+ K
Sbjct: 65 EVDAAMCARPHKVDGRVVEPKRAVSREDSVK 95
>FB|FBgn0004903 [details] [associations]
symbol:Rb97D "Ribonuclear protein at 97D" species:7227
"Drosophila melanogaster" [GO:0007286 "spermatid development"
evidence=IMP] [GO:0003729 "mRNA binding" evidence=ISS;NAS]
[GO:0007283 "spermatogenesis" evidence=NAS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 EMBL:AE014297 GO:GO:0007275
GO:GO:0007286 GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330
eggNOG:COG0724 GeneTree:ENSGT00700000104255 EMBL:L02106
EMBL:BT001320 PIR:S33679 PIR:S33680 RefSeq:NP_001014671.1
RefSeq:NP_001014672.1 RefSeq:NP_001014673.1 RefSeq:NP_001014674.1
RefSeq:NP_001014675.1 RefSeq:NP_001014676.1 RefSeq:NP_001014677.1
RefSeq:NP_524520.1 RefSeq:NP_733172.1 UniGene:Dm.22918
ProteinModelPortal:Q02926 SMR:Q02926 DIP:DIP-18137N IntAct:Q02926
MINT:MINT-957540 STRING:Q02926 PaxDb:Q02926 PRIDE:Q02926
EnsemblMetazoa:FBtr0085093 EnsemblMetazoa:FBtr0100337
EnsemblMetazoa:FBtr0100339 EnsemblMetazoa:FBtr0100340 GeneID:43231
KEGG:dme:Dmel_CG6354 CTD:43231 FlyBase:FBgn0004903
InParanoid:Q02926 OMA:DICELEH OrthoDB:EOG43N5VC PhylomeDB:Q02926
ChiTaRS:Rb97D GenomeRNAi:43231 NextBio:832835 Bgee:Q02926
GermOnline:CG6354 Uniprot:Q02926
Length = 471
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 106/173 (61%), Positives = 125/173 (72%)
Query: 4 EPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMV 63
E EHLRKLFIGGL T+ E LK + WG VVDVVVM+D TK+SRGFGFITY+ + MV
Sbjct: 27 ELEHLRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMV 86
Query: 64 DDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQF 123
D AQ RPH ID K VE KRA+PR E E +VKKLFVG L+D+ EE L+EYF QF
Sbjct: 87 DRAQENRPHIIDGKTVEAKRALPRPERESRETNISVKKLFVGGLKDNHDEECLREYFLQF 146
Query: 124 GEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKAL 176
G V SV L+T+K TGK+RGF FVE++DYD VDKA LK H +K VDVKK++
Sbjct: 147 GNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKKQHAIKYVHVDVKKSI 199
Score = 172 (65.6 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 34/88 (38%), Positives = 54/88 (61%)
Query: 99 VKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKAC 158
++KLF+G L TEE+LK ++GQ+G+V V ++ + T + RGFGF+ Y VD+A
Sbjct: 31 LRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQ 90
Query: 159 LKGTHLVKGKKVDVKKALSKEEMAKLKT 186
H++ GK V+ K+AL + E +T
Sbjct: 91 ENRPHIIDGKTVEAKRALPRPERESRET 118
>ZFIN|ZDB-GENE-060224-1 [details] [associations]
symbol:hnrnpa3 "heterogeneous nuclear
ribonucleoprotein A3" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-060224-1 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529 HOVERGEN:HBG002295
GeneTree:ENSGT00700000104376 EMBL:CR848724 IPI:IPI00863016
UniGene:Dr.85855 SMR:B0V1I7 Ensembl:ENSDART00000135273 OMA:IETIDIM
Uniprot:B0V1I7
Length = 312
Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
Identities = 93/180 (51%), Positives = 130/180 (72%)
Query: 2 TKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAH 61
+KEPE LRKLFIGGL + T+ ++L++HFE WG + D VVM+DP K+SRGFGF+TYSS
Sbjct: 6 SKEPEQLRKLFIGGLSFETTEDSLRAHFEQWGKLTDCVVMRDPANKRSRGFGFVTYSSVS 65
Query: 62 MVDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFG 121
VD A ARPH +D +VVEPKRAV R + N+P A TVKK+FVG +++D E ++EYF
Sbjct: 66 EVDAAMTARPHKVDGRVVEPKRAVSREDSNKPGAHLTVKKIFVGGIKEDTEEYHIREYFE 125
Query: 122 QFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEM 181
+G++ ++ ++ E+ TGKKRGF FV ++D+D VDK + H + +V+KAL K+EM
Sbjct: 126 CYGKIETIDIMEERSTGKKRGFCFVTFDDHDTVDKIVAQKYHTINSHNCEVRKALPKQEM 185
Score = 161 (61.7 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 31/85 (36%), Positives = 52/85 (61%)
Query: 99 VKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKAC 158
++KLF+G L + TE+ L+ +F Q+G++T ++ + + RGFGFV Y+ VD A
Sbjct: 12 LRKLFIGGLSFETTEDSLRAHFEQWGKLTDCVVMRDPANKRSRGFGFVTYSSVSEVDAAM 71
Query: 159 LKGTHLVKGKKVDVKKALSKEEMAK 183
H V G+ V+ K+A+S+E+ K
Sbjct: 72 TARPHKVDGRVVEPKRAVSREDSNK 96
>UNIPROTKB|D4A491 [details] [associations]
symbol:D4A491 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 OrthoDB:EOG4HQDKF
IPI:IPI00560785 ProteinModelPortal:D4A491
Ensembl:ENSRNOT00000046349 OMA:DNAMEAR Uniprot:D4A491
Length = 239
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 92/176 (52%), Positives = 128/176 (72%)
Query: 4 EPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMV 63
EPE +RKLFIGGL + T+ E+L+SHFE WG + D VVM+DP TK+SRGFGF+TY++ V
Sbjct: 2 EPEQVRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 61
Query: 64 DDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQF 123
D A ARPH ++ +VVEPKRAV R + RP+A TVKK+FVG +++D E L++YFGQ+
Sbjct: 62 DAAMNARPHKVNGRVVEPKRAVSREDSQRPDAYLTVKKIFVGGIKEDTEEHHLRDYFGQY 121
Query: 124 GEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKE 179
G+ + +VT++ +GKKRGF FV ++D D VDK ++ H V G +V+KA S +
Sbjct: 122 GKTEVIEIVTDRGSGKKRGFAFVTFDDRDSVDKIVIQKYHTVNGHNCEVRKAPSNQ 177
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 32/82 (39%), Positives = 51/82 (62%)
Query: 99 VKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKAC 158
V+KLF+G L + T+E L+ +F Q+G +T ++ + T + RGFGFV Y + VD A
Sbjct: 6 VRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAM 65
Query: 159 LKGTHLVKGKKVDVKKALSKEE 180
H V G+ V+ K+A+S+E+
Sbjct: 66 NARPHKVNGRVVEPKRAVSRED 87
>UNIPROTKB|D4A1X0 [details] [associations]
symbol:D4A1X0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0097157
GO:GO:0048025 OrthoDB:EOG4HQDKF IPI:IPI00778370
ProteinModelPortal:D4A1X0 Ensembl:ENSRNOT00000061082 Uniprot:D4A1X0
Length = 312
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 92/183 (50%), Positives = 137/183 (74%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
+E E KLFIGGL + T+ E+L++++E WG + D VVM+DP +K+SRGFGF+T+SS
Sbjct: 3 REKEQFCKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAE 62
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A AARPH+ID +VVEPKRAV R E +P A TVKKLFVG +++D E L++YF +
Sbjct: 63 VDVAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEE 122
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G++ ++ ++T++++GK RGFGFV ++D+DPVDK L+ H G +V+KALS++EM
Sbjct: 123 YGKIDTIEIITDRQSGK-RGFGFVTFDDHDPVDKIVLQKYHTKNGHNAEVRKALSRQEMQ 181
Query: 183 KLK 185
+++
Sbjct: 182 EVQ 184
>UNIPROTKB|F1M6U1 [details] [associations]
symbol:F1M6U1 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 IPI:IPI00362299 Ensembl:ENSRNOT00000007800
Uniprot:F1M6U1
Length = 252
Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
Identities = 93/177 (52%), Positives = 129/177 (72%)
Query: 6 EHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDD 65
E L KLFI GL + T+ E+L+SHFE WG + D VVM+DP TK+ RGFGF+TY++ VD
Sbjct: 4 EQLWKLFIDGLSFETTDESLRSHFERWGTLTDCVVMRDPNTKRPRGFGFVTYTTVEEVDA 63
Query: 66 AQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGE 125
A ARPH +D +VVEPKRAV R + RP A TVKK+FVGS+++D E L+EYF Q+G+
Sbjct: 64 AMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGSIKEDTEEHHLREYFEQYGK 123
Query: 126 VTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+ + ++T++ +G+KRGF FV ++D+D VDK ++ H V G +V+KALSK+EMA
Sbjct: 124 IEVIEIMTDRGSGQKRGFVFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMA 180
>UNIPROTKB|F1SA35 [details] [associations]
symbol:LOC100737421 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104376 EMBL:FP326688 RefSeq:XP_003480852.1
Ensembl:ENSSSCT00000014862 GeneID:100737421 KEGG:ssc:100737421
OMA:STFGNIV Uniprot:F1SA35
Length = 349
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 88/181 (48%), Positives = 135/181 (74%)
Query: 6 EHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDD 65
E KLFIGGL RT+ ++L+++++ WG + D VV++DP K+SRGFGF+T+SS VD
Sbjct: 18 EQFHKLFIGGLCSRTTEKSLRNYYQQWGKLTDCVVLRDPSNKRSRGFGFVTFSSVAEVDA 77
Query: 66 AQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGE 125
A AARPH++D KVV+PKRAV R E +P A VKKLFVG +++D E L++YF ++G+
Sbjct: 78 AMAARPHSVDGKVVDPKRAVAREESEKPGAHLAVKKLFVGGIKEDTEEHHLRDYFEKYGK 137
Query: 126 VTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMAKLK 185
+ ++ ++T++++GKKRGFGFV ++D+DPVDK L+ H + G +V KALS++EM +++
Sbjct: 138 IDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHHAEVGKALSRQEMQEVQ 197
Query: 186 T 186
+
Sbjct: 198 S 198
Score = 147 (56.8 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 32/105 (30%), Positives = 55/105 (52%)
Query: 3 KEPEHL--RKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSA 60
K HL +KLF+GG+ T L+ +FE +G + + ++ D Q+ K RGFGF+T+
Sbjct: 104 KPGAHLAVKKLFVGGIKEDTEEHHLRDYFEKYGKIDTIEIITDRQSGKKRGFGFVTFDDH 163
Query: 61 HMVDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVG 105
VD + HTI+ E +A+ R E+ ++ + + +G
Sbjct: 164 DPVDKIVLQKYHTINGHHAEVGKALSRQEMQEVQSSTSGRGGHIG 208
>UNIPROTKB|G5E5V7 [details] [associations]
symbol:G5E5V7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0051170 "nuclear import" evidence=IEA] [GO:0051168 "nuclear
export" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
InterPro:IPR021662 Pfam:PF11627 GeneTree:ENSGT00550000074566
EMBL:DAAA02007960 Ensembl:ENSBTAT00000036150 OMA:ANTMPIL
Uniprot:G5E5V7
Length = 319
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 95/180 (52%), Positives = 130/180 (72%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KE E LRKLFIGGL + T+ E+L+SHFE WG + D VVM DP TK+SRGFGF+TY++
Sbjct: 17 KELEQLRKLFIGGLSFETTDESLRSHFEQWGMLTDCVVM-DPNTKRSRGFGFVTYTTVEE 75
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARP +D +VVEPKRAV R + RP A TVKK+FVG +++D E L++YF Q
Sbjct: 76 VDAAMNARPQKMDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQ 135
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G++ + ++T++ +GKKRGF FV ++D+D VDK ++ H G +V+KALSK+EMA
Sbjct: 136 YGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTGNGHNCEVRKALSKQEMA 195
Score = 146 (56.5 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 31/88 (35%), Positives = 52/88 (59%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ ++KLF+G L + T+E L+ +F Q+G +T +V + T + RGFGFV Y +
Sbjct: 16 PKELEQLRKLFIGGLSFETTDESLRSHFEQWGMLTD-CVVMDPNTKRSRGFGFVTYTTVE 74
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEE 180
VD A + G+ V+ K+A+S+E+
Sbjct: 75 EVDAAMNARPQKMDGRVVEPKRAVSRED 102
>UNIPROTKB|E9PSU5 [details] [associations]
symbol:E9PSU5 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104376 IPI:IPI00364363 PRIDE:E9PSU5
Ensembl:ENSRNOT00000022054 Uniprot:E9PSU5
Length = 363
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 94/186 (50%), Positives = 134/186 (72%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAW-------GDVVDVVVMKDPQTKKSRGFGFI 55
KEPE LRKLFIGGL + T+ ++L+ HFE W G + D VVM+DPQTK+SRGFGF+
Sbjct: 7 KEPEQLRKLFIGGLSFETTDDSLREHFEGWRDGSEKWGTLTDCVVMRDPQTKRSRGFGFV 66
Query: 56 TYSSAHMVDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEED 115
TYS VD A ARPH +D +VVEPKRAV R + +P A TVKK+FVG +++D E +
Sbjct: 67 TYSCEE-VDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTGEYN 125
Query: 116 LKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKA 175
L++YF ++G++ ++ ++ ++++GKKRGF FV ++D+D VDK ++ H + G +VKKA
Sbjct: 126 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 185
Query: 176 LSKEEM 181
LSK+EM
Sbjct: 186 LSKQEM 191
Score = 143 (55.4 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 33/98 (33%), Positives = 58/98 (59%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYF-G------QFGEVTSVALVTEKETGKKRGFGF 145
P+ ++KLF+G L + T++ L+E+F G ++G +T ++ + +T + RGFGF
Sbjct: 6 PKEPEQLRKLFIGGLSFETTDDSLREHFEGWRDGSEKWGTLTDCVVMRDPQTKRSRGFGF 65
Query: 146 VEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMAK 183
V Y+ + VD A H V G+ V+ K+A+S+E+ K
Sbjct: 66 VTYS-CEEVDAAMCARPHKVDGRVVEPKRAVSREDSVK 102
>UNIPROTKB|F1M5N1 [details] [associations]
symbol:F1M5N1 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00567689
ProteinModelPortal:F1M5N1 Ensembl:ENSRNOT00000023344 Uniprot:F1M5N1
Length = 207
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 93/179 (51%), Positives = 129/179 (72%)
Query: 4 EPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMV 63
EPE +RKLFIGGL + T+ E+L+SHFE WG + D VVM+DP TK+SRGFGF+TY++ V
Sbjct: 5 EPEQVRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 64
Query: 64 DDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQF 123
D A ARPH +D +VVEPKRAV + RP A +K +FVG++++D E L++YFGQ+
Sbjct: 65 DAAMNARPHKVDGRVVEPKRAVSIEDSQRPGAYLNMK-IFVGAIKEDTEEHHLRDYFGQY 123
Query: 124 GEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
G+ + +VT++ +GKKRGF FV ++D D VDK ++ H V G +V+KA SK+EMA
Sbjct: 124 GKTEVIEIVTDRGSGKKRGFAFVTFDDRDSVDKIVIQKYHTVNGHNCEVRKAPSKQEMA 182
>UNIPROTKB|F1N3T3 [details] [associations]
symbol:F1N3T3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104376 EMBL:DAAA02019525 IPI:IPI00709098
Ensembl:ENSBTAT00000014774 OMA:FGGYPCY Uniprot:F1N3T3
Length = 352
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 89/183 (48%), Positives = 137/183 (74%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KE E +RKLFIGGL T+ E+LK++++ WG++ D VV++ ++KSRGFGF+T+SS
Sbjct: 15 KENEQIRKLFIGGLSSETTEESLKNYYQQWGELTDCVVIRGLASQKSRGFGFVTFSSVAE 74
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A AARPH+ID +VV+PKRAV R + + + VKKLFVG +++D E L+EYF +
Sbjct: 75 VDAAMAARPHSIDGRVVDPKRAVSREKSEKQGSLVNVKKLFVGGIKEDTEEHHLREYFEK 134
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G++ ++ ++T++++GKKRGFGFV ++DYDPVDK L+ H + G + +V KALS++EM
Sbjct: 135 YGKIDAIEIITDRQSGKKRGFGFVTFDDYDPVDKIMLQKYHAINGHRAEVGKALSRQEMK 194
Query: 183 KLK 185
+++
Sbjct: 195 EIQ 197
>UNIPROTKB|F1PGQ0 [details] [associations]
symbol:F1PGQ0 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 GeneTree:ENSGT00550000074566 EMBL:AAEX03010176
Ensembl:ENSCAFT00000005615 OMA:RRYQRIT Uniprot:F1PGQ0
Length = 318
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 94/180 (52%), Positives = 129/180 (71%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE L KLFIGGL + T+ E+L+SHFE WG D VVM+DP TK+SRG GF+ Y++
Sbjct: 8 KEPEQLWKLFIGGLSFETTEESLRSHFEQWGTFTDCVVMRDPNTKRSRGVGFLMYATVEE 67
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARPH +D +VVEPKRAV R + RP A TVKK+FVG +++D E L++YF Q
Sbjct: 68 VDAAMNARPH-VDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQ 126
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G++ + ++T++ +GKK GF FV ++D+D VDK ++ H V G +V+KALSK+EMA
Sbjct: 127 YGKIEVIEIMTDRGSGKK-GFAFVTFDDHDSVDKIVIQKYHPVNGHSCEVRKALSKQEMA 185
Score = 141 (54.7 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 31/88 (35%), Positives = 50/88 (56%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ + KLF+G L + TEE L+ +F Q+G T ++ + T + RG GF+ Y +
Sbjct: 7 PKEPEQLWKLFIGGLSFETTEESLRSHFEQWGTFTDCVVMRDPNTKRSRGVGFLMYATVE 66
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEE 180
VD A H V G+ V+ K+A+S+E+
Sbjct: 67 EVDAAMNARPH-VDGRVVEPKRAVSRED 93
>ZFIN|ZDB-GENE-030131-6154 [details] [associations]
symbol:hnrnpa0b "heterogeneous nuclear
ribonucleoprotein A0b" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030131-6154
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529
eggNOG:COG0724 HOVERGEN:HBG002295 HOGENOM:HOG000234442 KO:K12894
EMBL:BC066434 IPI:IPI00507638 RefSeq:NP_999871.1 UniGene:Dr.35374
ProteinModelPortal:Q6NYW8 SMR:Q6NYW8 STRING:Q6NYW8 PRIDE:Q6NYW8
GeneID:334222 KEGG:dre:334222 CTD:334222 InParanoid:Q6NYW8
OrthoDB:EOG4M65KN NextBio:20810313 ArrayExpress:Q6NYW8 Bgee:Q6NYW8
Uniprot:Q6NYW8
Length = 314
Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
Identities = 94/178 (52%), Positives = 132/178 (74%)
Query: 4 EPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMV 63
E E L KLF+GGL+ +T+++ L+S+FE +G++ D VV+++ Q ++SR FGF+TYS++
Sbjct: 3 EMEKLCKLFVGGLNVQTTNDGLRSYFEQFGNLTDCVVVQNDQLQRSRCFGFVTYSTSEEA 62
Query: 64 DDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQF 123
D A AARPH +D K VE KRAV R + RPEA A VKK+FVG L+DDI E+DL E+F QF
Sbjct: 63 DAAMAARPHVVDGKNVEVKRAVAREDAGRPEALAKVKKIFVGGLKDDIEEKDLTEFFSQF 122
Query: 124 GEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEM 181
G + ++T+K+TGKKRGFGFV + D D DKA + H++ G KV+VKKAL+K+E+
Sbjct: 123 GMIEKSEVITDKDTGKKRGFGFVHFEDNDSADKAVVLKFHMINGHKVEVKKALTKQEI 180
Score = 162 (62.1 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 32/83 (38%), Positives = 48/83 (57%)
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLK 160
KLFVG L T + L+ YF QFG +T +V + + R FGFV Y+ + D A
Sbjct: 9 KLFVGGLNVQTTNDGLRSYFEQFGNLTDCVVVQNDQLQRSRCFGFVTYSTSEEADAAMAA 68
Query: 161 GTHLVKGKKVDVKKALSKEEMAK 183
H+V GK V+VK+A+++E+ +
Sbjct: 69 RPHVVDGKNVEVKRAVAREDAGR 91
>UNIPROTKB|F1N4K3 [details] [associations]
symbol:F1N4K3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 GeneTree:ENSGT00700000104376 EMBL:DAAA02019527
IPI:IPI00906169 Ensembl:ENSBTAT00000002951 OMA:HAINGHH
Uniprot:F1N4K3
Length = 329
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 86/183 (46%), Positives = 137/183 (74%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KE E +RKLFIGGL ++T+ E+L+ +++ WG++ D VV++D +++SRG GF+T+SS
Sbjct: 3 KEAEQIRKLFIGGLSFQTTEESLRKYYQQWGELTDCVVLRDFASQRSRGCGFVTFSSVTE 62
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A AARPH+ID +V+EP+RA+PR + A T+KKLFVG +++D E L+EYF +
Sbjct: 63 VDAAMAARPHSIDGRVLEPRRAIPREASGQRGAHWTLKKLFVGGIKEDTEEHHLREYFEK 122
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G++ ++ ++T++++G+KRGFGFV ++DYDPVDK L+ H + G +V+KALS EM
Sbjct: 123 YGKIDAIEIITDRQSGRKRGFGFVTFDDYDPVDKIVLQKYHAINGHHAEVRKALSIWEMQ 182
Query: 183 KLK 185
+++
Sbjct: 183 QVQ 185
Score = 137 (53.3 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 27/94 (28%), Positives = 51/94 (54%)
Query: 8 LRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQ 67
L+KLF+GG+ T L+ +FE +G + + ++ D Q+ + RGFGF+T+ VD
Sbjct: 99 LKKLFVGGIKEDTEEHHLREYFEKYGKIDAIEIITDRQSGRKRGFGFVTFDDYDPVDKIV 158
Query: 68 AARPHTIDSKVVEPKRAVPRTEINRPEAGATVKK 101
+ H I+ E ++A+ E+ + + + K+
Sbjct: 159 LQKYHAINGHHAEVRKALSIWEMQQVQGSRSRKR 192
>WB|WBGene00001999 [details] [associations]
symbol:hrp-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0040015 "negative regulation of
multicellular organism growth" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0000781 "chromosome, telomeric region" evidence=IDA]
[GO:0031581 "hemidesmosome assembly" evidence=IGI] [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISS] [GO:0003723 "RNA
binding" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0048477 GO:GO:0003723 GO:GO:0040035 GO:GO:0030529
GO:GO:0040015 GO:GO:0000398 GO:GO:0000781 eggNOG:COG0724
GO:GO:0031581 GeneTree:ENSGT00700000104255 KO:K12741 EMBL:D10877
EMBL:FO081370 PIR:S35500 RefSeq:NP_001023199.1
RefSeq:NP_001040944.1 RefSeq:NP_001040945.1 RefSeq:NP_500326.2
UniGene:Cel.7537 ProteinModelPortal:Q22037 SMR:Q22037 IntAct:Q22037
STRING:Q22037 PaxDb:Q22037 PRIDE:Q22037 EnsemblMetazoa:F42A6.7a.1
EnsemblMetazoa:F42A6.7a.2 GeneID:177101 KEGG:cel:CELE_F42A6.7
UCSC:F42A6.7a.1 CTD:177101 WormBase:F42A6.7a WormBase:F42A6.7b
WormBase:F42A6.7c WormBase:F42A6.7d InParanoid:Q22037 OMA:YGGGWGQ
NextBio:895332 Uniprot:Q22037
Length = 346
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 87/180 (48%), Positives = 129/180 (71%)
Query: 4 EPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMV 63
EPE+LRK+F+GGL T+ + ++ + +G++ D++VM+DP TK+SRGFGF+T+S V
Sbjct: 18 EPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEV 77
Query: 64 DDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQF 123
D A RPH ID K V+PKRAVPR + NR E+ + K+L+V +R+D TE+ L EYF ++
Sbjct: 78 DAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKY 137
Query: 124 GEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMAK 183
G VT ++ +K T K RGFGFV ++D+D VD+ L+ +H+V G + DV+K LSK+EM+K
Sbjct: 138 GTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEMSK 197
Score = 110 (43.8 bits), Expect = 0.00037, P = 0.00037
Identities = 19/86 (22%), Positives = 45/86 (52%)
Query: 9 RKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQA 68
++L++ G+ + + L +F +G V ++ D T+K RGFGF+T+ VD
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 173
Query: 69 ARPHTIDSKVVEPKRAVPRTEINRPE 94
+ H ++ + ++ + + E+++ +
Sbjct: 174 QKSHMVNGHRCDVRKGLSKDEMSKAQ 199
>UNIPROTKB|F1PVY3 [details] [associations]
symbol:F1PVY3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 GeneTree:ENSGT00550000074566 EMBL:AAEX03016228
Ensembl:ENSCAFT00000027434 Uniprot:F1PVY3
Length = 301
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 94/180 (52%), Positives = 133/180 (73%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE L+KLFIGGL + T+ E+L+SHFE WG + VVM+DP TK+SRGFGF+TY++
Sbjct: 8 KEPEQLQKLFIGGLSFETTDESLRSHFE-WGTLTGCVVMRDPNTKRSRGFGFVTYATVEE 66
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARPH +D +VVEPKRAV R + +A TVKK+FVG ++++ TE+ L++YF +
Sbjct: 67 VDAAMNARPHKVDGRVVEPKRAVSREDSQTLDAHLTVKKIFVGGIKEN-TEDHLRDYF-E 124
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G++ + ++T++ +GKKRGF FV ++D+D VDK K H V G +V+KALSK+EMA
Sbjct: 125 YGKIEVIEIMTDRGSGKKRGFTFVTFDDHDSVDKIIQK-YHTVNGHNCEVRKALSKQEMA 183
Score = 153 (58.9 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 32/92 (34%), Positives = 54/92 (58%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ ++KLF+G L + T+E L+ +F ++G +T ++ + T + RGFGFV Y +
Sbjct: 7 PKEPEQLQKLFIGGLSFETTDESLRSHF-EWGTLTGCVVMRDPNTKRSRGFGFVTYATVE 65
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEEMAKL 184
VD A H V G+ V+ K+A+S+E+ L
Sbjct: 66 EVDAAMNARPHKVDGRVVEPKRAVSREDSQTL 97
>UNIPROTKB|E2R5N6 [details] [associations]
symbol:E2R5N6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 GeneTree:ENSGT00550000074566 EMBL:AAEX03012109
Ensembl:ENSCAFT00000010232 OMA:EMASASC Uniprot:E2R5N6
Length = 322
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 89/180 (49%), Positives = 128/180 (71%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
K PE L+KLFIGG + T+ E+L+SHF+ G + D VVM+DP TK+SRGFGF+TY++
Sbjct: 8 KGPEQLQKLFIGGWSFETTDESLRSHFKQRGILTDCVVMRDPNTKRSRGFGFVTYTAVEE 67
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARPH +D +VVEPKR + + RP A TVKK+F G +++D E L++YF Q
Sbjct: 68 VDPAMHARPHKVDGRVVEPKRTSSKEDSQRPGAHLTVKKIFAGGIKEDTEEHHLRDYFEQ 127
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G++ + ++T++ +GKKRGF FV ++D+D VDK ++ H V G +V+KALSK+EMA
Sbjct: 128 YGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNWEVRKALSKQEMA 187
Score = 148 (57.2 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 31/88 (35%), Positives = 49/88 (55%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ ++KLF+G + T+E L+ +F Q G +T ++ + T + RGFGFV Y +
Sbjct: 7 PKGPEQLQKLFIGGWSFETTDESLRSHFKQRGILTDCVVMRDPNTKRSRGFGFVTYTAVE 66
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEE 180
VD A H V G+ V+ K+ SKE+
Sbjct: 67 EVDPAMHARPHKVDGRVVEPKRTSSKED 94
>UNIPROTKB|F1Q2T4 [details] [associations]
symbol:F1Q2T4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 GeneTree:ENSGT00550000074566 EMBL:AAEX03026834
Ensembl:ENSCAFT00000030325 Uniprot:F1Q2T4
Length = 290
Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
Identities = 92/179 (51%), Positives = 131/179 (73%)
Query: 4 EPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMV 63
EPE LRKLFIGGL + T++E+L+SHFE WG + D VVM+DP TK SRGFGF+TY++ V
Sbjct: 9 EPEQLRKLFIGGLSFETTNESLRSHFEQWGMLRDCVVMRDPNTKHSRGFGFVTYATVKEV 68
Query: 64 DDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQF 123
D AAR H +D +VVEPKRAV R + RP A TV+K+FVG +++D E L++YF Q+
Sbjct: 69 D---AARSHKVDGRVVEPKRAVSREDSQRPGAHLTVRKIFVGGIKEDTEEHHLRDYFKQY 125
Query: 124 GEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
G++ + ++T++ +GKKRGF V ++D+D DK ++ ++V G +V+KALSK+EMA
Sbjct: 126 GKIEVIEIMTDRGSGKKRGFASVTFDDHDK-DKIVIQKYYIVNGHNCEVRKALSKQEMA 183
>ZFIN|ZDB-GENE-030131-2249 [details] [associations]
symbol:hnrnpa0a "heterogeneous nuclear
ribonucleoprotein A0a" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030131-2249
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724
HOVERGEN:HBG002295 HOGENOM:HOG000234442 OrthoDB:EOG4W6NX4
EMBL:BC066672 IPI:IPI00995382 RefSeq:NP_997810.1 UniGene:Dr.75559
ProteinModelPortal:Q6NYB0 SMR:Q6NYB0 STRING:Q6NYB0 PRIDE:Q6NYB0
GeneID:323529 KEGG:dre:323529 CTD:323529 InParanoid:Q6NYB0
NextBio:20808302 ArrayExpress:Q6NYB0 Bgee:Q6NYB0 Uniprot:Q6NYB0
Length = 305
Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
Identities = 94/188 (50%), Positives = 132/188 (70%)
Query: 1 ITKEPEH-LRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSS 59
+T + E+ L KLF+GGL+ +T+ + L++HFE +G + D VV+++ Q K+SR FGF+TYSS
Sbjct: 1 MTAQMENQLCKLFVGGLNVQTTDDGLRNHFEQYGKLTDCVVVQNQQLKRSRCFGFVTYSS 60
Query: 60 AHMVDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEY 119
D A +ARPH +D VE KRAV R + +PEA A VKK+F+G L+DDI E+ L++
Sbjct: 61 PDEADSAMSARPHILDGNNVELKRAVAREDAGKPEALAKVKKIFIGGLKDDIEEDHLRDC 120
Query: 120 FGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKE 179
F QFG V ++T+KETGKKRGFGFV + D D DKA + H++ G KV+VKKAL+K+
Sbjct: 121 FSQFGAVEKAEVITDKETGKKRGFGFVYFEDNDSADKAVVLKFHMINGHKVEVKKALTKQ 180
Query: 180 EMAKLKTR 187
EM +R
Sbjct: 181 EMQAAGSR 188
>UNIPROTKB|D4AD23 [details] [associations]
symbol:D4AD23 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 OrthoDB:EOG4HQDKF
InterPro:IPR021662 Pfam:PF11627 IPI:IPI00390944
ProteinModelPortal:D4AD23 Ensembl:ENSRNOT00000039846 Uniprot:D4AD23
Length = 313
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 90/180 (50%), Positives = 126/180 (70%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFIG L + T+ E+L+SHFE WG + D VVM+DP TK+SRGFGF+TY++
Sbjct: 8 KEPEQLRKLFIGALSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE 67
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARP ++ +VVEPKRAV R + RP A TVKK+FVG +++D TE L++YF Q
Sbjct: 68 VDAAMNARPQKVNGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKED-TEHHLRDYFEQ 126
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G+ + ++T++ GKKRGF FV ++D+D VDK ++ H V G + + K++MA
Sbjct: 127 YGKTEVIEIMTDRGRGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCETRV---KQDMA 183
Score = 157 (60.3 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 31/88 (35%), Positives = 53/88 (60%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ ++KLF+G+L + T+E L+ +F Q+G +T ++ + T + RGFGFV Y +
Sbjct: 7 PKEPEQLRKLFIGALSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEE 180
VD A V G+ V+ K+A+S+E+
Sbjct: 67 EVDAAMNARPQKVNGRVVEPKRAVSRED 94
>UNIPROTKB|D4A2D2 [details] [associations]
symbol:D4A2D2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 OrthoDB:EOG4HQDKF
InterPro:IPR021662 Pfam:PF11627 GeneTree:ENSGT00550000074566
IPI:IPI00559583 ProteinModelPortal:D4A2D2
Ensembl:ENSRNOT00000032337 Uniprot:D4A2D2
Length = 262
Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
Identities = 91/180 (50%), Positives = 128/180 (71%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFIGGL + T+ E+L+SHFE WG + + VVM+DP TK+SRGFGF+TY++
Sbjct: 8 KEPEQLRKLFIGGLTFETTDESLRSHFEQWGTLTECVVMRDPNTKRSRGFGFVTYATVEE 67
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARPH +D +VVEP+RAV R + + TVK +FVG +++D E L++Y Q
Sbjct: 68 VDAAMNARPHKVDGRVVEPERAVSREDSH----SLTVK-IFVGGIKEDTEEHYLRDYSEQ 122
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G++ + ++T++ +GKKRGF FV ++DYD VDK ++ H V V+KALSK+EMA
Sbjct: 123 YGKIEVIEIMTDRGSGKKRGFAFVTFDDYDSVDKIVIRKYHTVNDHNC-VRKALSKQEMA 181
Score = 161 (61.7 bits), Expect = 8.3e-12, P = 8.3e-12
Identities = 32/95 (33%), Positives = 55/95 (57%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ ++KLF+G L + T+E L+ +F Q+G +T ++ + T + RGFGFV Y +
Sbjct: 7 PKEPEQLRKLFIGGLTFETTDESLRSHFEQWGTLTECVVMRDPNTKRSRGFGFVTYATVE 66
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEEMAKLKTR 187
VD A H V G+ V+ ++A+S+E+ L +
Sbjct: 67 EVDAAMNARPHKVDGRVVEPERAVSREDSHSLTVK 101
>UNIPROTKB|F1M6S2 [details] [associations]
symbol:F1M6S2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00782238
ProteinModelPortal:F1M6S2 Ensembl:ENSRNOT00000030712 Uniprot:F1M6S2
Length = 223
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 90/180 (50%), Positives = 127/180 (70%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFI-TYSSAH 61
KEPE LRKLFIG L + T+ ++L+ HFE WG +D VVM+D Q K+SR FGF+ TYS
Sbjct: 12 KEPEQLRKLFIGCLSFETTDDSLREHFEKWG-TLDCVVMRDLQIKRSRSFGFVSTYSCVK 70
Query: 62 MVDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFG 121
VD A ARPH +D VVEPKRAV R + +P A TVKK+FVG +++D E +L++YF
Sbjct: 71 EVDAAMCARPHKVDGHVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFE 130
Query: 122 QFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEM 181
++G++ + ++ ++++GKKRGF FV ++D+D VDK K H + G +VKKA+SK+EM
Sbjct: 131 KYGKIEIIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVQK-YHTINGHNYEVKKAVSKQEM 189
Score = 132 (51.5 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 31/98 (31%), Positives = 55/98 (56%)
Query: 87 RTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFV 146
+ E + P+ ++KLF+G L + T++ L+E+F ++G + V + + + + R FGFV
Sbjct: 5 KMEGHDPKEPEQLRKLFIGCLSFETTDDSLREHFEKWGTLDCVVM-RDLQIKRSRSFGFV 63
Query: 147 E-YNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMAK 183
Y+ VD A H V G V+ K+A+S+E+ K
Sbjct: 64 STYSCVKEVDAAMCARPHKVDGHVVEPKRAVSREDSVK 101
>UNIPROTKB|E2RJI3 [details] [associations]
symbol:LOC608729 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
KO:K12741 InterPro:IPR021662 Pfam:PF11627
GeneTree:ENSGT00550000074566 EMBL:AAEX03015120 RefSeq:XP_864182.2
ProteinModelPortal:E2RJI3 Ensembl:ENSCAFT00000015269 GeneID:608729
KEGG:cfa:608729 Uniprot:E2RJI3
Length = 321
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 93/181 (51%), Positives = 127/181 (70%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE L KLFI GL +T+ E+L+SH E G ++D VVM+DP TK SRGFGF TY++
Sbjct: 8 KEPEQLWKLFIKGLSSKTTDESLRSHCEQQGALMDCVVMRDPNTKHSRGFGFTTYATRED 67
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYF-G 121
VD ARPH +D +VVEPKRAV R + RP A TVKK+FVG +++D E LK+YF
Sbjct: 68 VDAVMNARPHKMDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLKDYFFE 127
Query: 122 QFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEM 181
Q+ ++ + ++T++ +GKKRGF FV ++D+D VDK ++ H V G +V+KALSK+EM
Sbjct: 128 QYEKIEVIEIMTDRGSGKKRGFAFVTFDDHDFVDKIVIQKCHPVNGHDHEVRKALSKQEM 187
Query: 182 A 182
A
Sbjct: 188 A 188
Score = 117 (46.2 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 26/88 (29%), Positives = 44/88 (50%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ + KLF+ L T+E L+ + Q G + ++ + T RGFGF Y +
Sbjct: 7 PKEPEQLWKLFIKGLSSKTTDESLRSHCEQQGALMDCVVMRDPNTKHSRGFGFTTYATRE 66
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEE 180
VD H + G+ V+ K+A+S+E+
Sbjct: 67 DVDAVMNARPHKMDGRVVEPKRAVSRED 94
>UNIPROTKB|F6RSR1 [details] [associations]
symbol:HNRNPA0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070935 "3'-UTR-mediated mRNA stabilization"
evidence=IEA] [GO:0032496 "response to lipopolysaccharide"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0017091 "AU-rich element binding" evidence=IEA] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 GO:GO:0032496
GO:GO:0006954 Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0070935
GeneTree:ENSGT00700000104255 OMA:GPMKQNL EMBL:DAAA02020383
IPI:IPI00687625 Ensembl:ENSBTAT00000022514 Uniprot:F6RSR1
Length = 310
Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
Identities = 91/181 (50%), Positives = 123/181 (67%)
Query: 1 ITKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSA 60
+ E L KLFIGGL+ +TS L+ HFEA+G + D VV+ +PQTK+SR FGF+TYS+
Sbjct: 4 VEMENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNV 63
Query: 61 HMVDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYF 120
D A AA PH +D VE KRAV R + RP A A VKKLFVG L+ D+ E DL E+F
Sbjct: 64 EEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHF 123
Query: 121 GQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEE 180
QFG V ++ +K++GKKRGFGFV + ++D DKA + H ++G +V+VKKA+ KE+
Sbjct: 124 SQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKED 183
Query: 181 M 181
+
Sbjct: 184 I 184
Score = 154 (59.3 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 30/83 (36%), Positives = 48/83 (57%)
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLK 160
KLF+G L +E L+ +F FG +T +V +T + R FGFV Y++ + D A
Sbjct: 13 KLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEADAAMAA 72
Query: 161 GTHLVKGKKVDVKKALSKEEMAK 183
H V G V++K+A+S+E+ A+
Sbjct: 73 SPHAVDGNTVELKRAVSREDSAR 95
Score = 146 (56.5 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 31/89 (34%), Positives = 47/89 (52%)
Query: 8 LRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQ 67
++KLF+GGL + L HF +G V ++ D Q+ K RGFGF+ + + D A
Sbjct: 102 VKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAA 161
Query: 68 AARPHTIDSKVVEPKRAVPRTEINRPEAG 96
+ H I VE K+AVP+ +I+ G
Sbjct: 162 VVKFHPIQGHRVEVKKAVPKEDIHSGGGG 190
>UNIPROTKB|F1RH94 [details] [associations]
symbol:HNRNPA0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070935 "3'-UTR-mediated mRNA stabilization"
evidence=IEA] [GO:0032496 "response to lipopolysaccharide"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0017091 "AU-rich element binding" evidence=IEA] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 GO:GO:0032496
GO:GO:0006954 Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0070935
GeneTree:ENSGT00700000104255 OMA:GPMKQNL EMBL:CU468422
Ensembl:ENSSSCT00000015648 Uniprot:F1RH94
Length = 315
Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
Identities = 91/181 (50%), Positives = 123/181 (67%)
Query: 1 ITKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSA 60
+ E L KLFIGGL+ +TS L+ HFEA+G + D VV+ +PQTK+SR FGF+TYS+
Sbjct: 4 VEMENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNV 63
Query: 61 HMVDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYF 120
D A AA PH +D VE KRAV R + RP A A VKKLFVG L+ D+ E DL E+F
Sbjct: 64 EEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHF 123
Query: 121 GQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEE 180
QFG V ++ +K++GKKRGFGFV + ++D DKA + H ++G +V+VKKA+ KE+
Sbjct: 124 SQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKED 183
Query: 181 M 181
+
Sbjct: 184 I 184
Score = 154 (59.3 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 30/83 (36%), Positives = 48/83 (57%)
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLK 160
KLF+G L +E L+ +F FG +T +V +T + R FGFV Y++ + D A
Sbjct: 13 KLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEADAAMAA 72
Query: 161 GTHLVKGKKVDVKKALSKEEMAK 183
H V G V++K+A+S+E+ A+
Sbjct: 73 SPHAVDGNTVELKRAVSREDSAR 95
Score = 146 (56.5 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 31/89 (34%), Positives = 47/89 (52%)
Query: 8 LRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQ 67
++KLF+GGL + L HF +G V ++ D Q+ K RGFGF+ + + D A
Sbjct: 102 VKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAA 161
Query: 68 AARPHTIDSKVVEPKRAVPRTEINRPEAG 96
+ H I VE K+AVP+ +I+ G
Sbjct: 162 VVKFHPIQGHRVEVKKAVPKEDIHSGGGG 190
>UNIPROTKB|E2RBV8 [details] [associations]
symbol:HNRNPA0 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0070935 "3'-UTR-mediated mRNA
stabilization" evidence=IEA] [GO:0032496 "response to
lipopolysaccharide" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0017091 "AU-rich element binding"
evidence=IEA] [GO:0006954 "inflammatory response" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0000166 GO:GO:0032496 GO:GO:0006954 Gene3D:3.30.70.330
GO:GO:0017091 GO:GO:0070935 GeneTree:ENSGT00700000104255 CTD:10949
KO:K12894 OMA:GPMKQNL EMBL:AAEX03007810 RefSeq:XP_538645.2
ProteinModelPortal:E2RBV8 Ensembl:ENSCAFT00000001730 GeneID:481524
KEGG:cfa:481524 NextBio:20856300 Uniprot:E2RBV8
Length = 310
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 91/178 (51%), Positives = 122/178 (68%)
Query: 4 EPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMV 63
E L KLFIGGL+ +TS L+ HFEA+G + D VV+ +PQTK+SR FGF+TYS+
Sbjct: 2 ENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEA 61
Query: 64 DDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQF 123
D A AA PH +D VE KRAV R + RP A A VKKLFVG L+ D+ E DL E+F QF
Sbjct: 62 DAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQF 121
Query: 124 GEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEM 181
G V ++ +K++GKKRGFGFV + ++D DKA + H ++G +V+VKKA+ KE++
Sbjct: 122 GTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 179
Score = 154 (59.3 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 30/83 (36%), Positives = 48/83 (57%)
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLK 160
KLF+G L +E L+ +F FG +T +V +T + R FGFV Y++ + D A
Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEADAAMAA 67
Query: 161 GTHLVKGKKVDVKKALSKEEMAK 183
H V G V++K+A+S+E+ A+
Sbjct: 68 SPHAVDGNTVELKRAVSREDSAR 90
Score = 146 (56.5 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 31/89 (34%), Positives = 47/89 (52%)
Query: 8 LRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQ 67
++KLF+GGL + L HF +G V ++ D Q+ K RGFGF+ + + D A
Sbjct: 97 VKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAA 156
Query: 68 AARPHTIDSKVVEPKRAVPRTEINRPEAG 96
+ H I VE K+AVP+ +I+ G
Sbjct: 157 VVKFHPIQGHRVEVKKAVPKEDIHSGGGG 185
>UNIPROTKB|Q13151 [details] [associations]
symbol:HNRNPA0 "Heterogeneous nuclear ribonucleoprotein A0"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IPI] [GO:0017091
"AU-rich element binding" evidence=IDA] [GO:0070935
"3'-UTR-mediated mRNA stabilization" evidence=ISS;TAS] [GO:0006954
"inflammatory response" evidence=ISS] [GO:0032496 "response to
lipopolysaccharide" evidence=ISS] [GO:0003723 "RNA binding"
evidence=TAS] [GO:0006397 "mRNA processing" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] Reactome:REACT_71 InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005654 EMBL:CH471062 GO:GO:0000166 GO:GO:0032496
GO:GO:0006954 Reactome:REACT_1675 Gene3D:3.30.70.330 GO:GO:0017091
GO:GO:0030529 GO:GO:0000398 eggNOG:COG0724 GO:GO:0070935
HOVERGEN:HBG002295 HOGENOM:HOG000234442 EMBL:U23803 EMBL:CR456986
EMBL:BC001008 EMBL:BC007271 EMBL:BC009284 EMBL:BC011972
EMBL:BC012980 EMBL:BC018949 EMBL:BC019271 EMBL:BC028976
EMBL:BC030249 IPI:IPI00011913 RefSeq:NP_006796.1 UniGene:Hs.645902
UniGene:Hs.96996 ProteinModelPortal:Q13151 SMR:Q13151 IntAct:Q13151
MINT:MINT-5001237 STRING:Q13151 PhosphoSite:Q13151 DMDM:8134660
REPRODUCTION-2DPAGE:Q13151 SWISS-2DPAGE:Q13151 PaxDb:Q13151
PeptideAtlas:Q13151 PRIDE:Q13151 DNASU:10949
Ensembl:ENST00000314940 GeneID:10949 KEGG:hsa:10949 UCSC:uc003lbt.3
CTD:10949 GeneCards:GC05M137114 HGNC:HGNC:5030 HPA:HPA036569
MIM:609409 neXtProt:NX_Q13151 PharmGKB:PA162391106
InParanoid:Q13151 KO:K12894 OMA:GPMKQNL OrthoDB:EOG4W6NX4
PhylomeDB:Q13151 GenomeRNAi:10949 NextBio:41601 Bgee:Q13151
CleanEx:HS_HNRNPA0 Genevestigator:Q13151 GermOnline:ENSG00000177733
Uniprot:Q13151
Length = 305
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 91/178 (51%), Positives = 122/178 (68%)
Query: 4 EPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMV 63
E L KLFIGGL+ +TS L+ HFEA+G + D VV+ +PQTK+SR FGF+TYS+
Sbjct: 2 ENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEA 61
Query: 64 DDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQF 123
D A AA PH +D VE KRAV R + RP A A VKKLFVG L+ D+ E DL E+F QF
Sbjct: 62 DAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQF 121
Query: 124 GEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEM 181
G V ++ +K++GKKRGFGFV + ++D DKA + H ++G +V+VKKA+ KE++
Sbjct: 122 GTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 179
Score = 154 (59.3 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 30/83 (36%), Positives = 48/83 (57%)
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLK 160
KLF+G L +E L+ +F FG +T +V +T + R FGFV Y++ + D A
Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEADAAMAA 67
Query: 161 GTHLVKGKKVDVKKALSKEEMAK 183
H V G V++K+A+S+E+ A+
Sbjct: 68 SPHAVDGNTVELKRAVSREDSAR 90
>MGI|MGI:1924384 [details] [associations]
symbol:Hnrnpa0 "heterogeneous nuclear ribonucleoprotein A0"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006954 "inflammatory response" evidence=IDA]
[GO:0017091 "AU-rich element binding" evidence=ISO;IDA] [GO:0019901
"protein kinase binding" evidence=ISO] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0032496 "response to
lipopolysaccharide" evidence=IDA] [GO:0070935 "3'-UTR-mediated mRNA
stabilization" evidence=IDA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 MGI:MGI:1924384
GO:GO:0005634 GO:GO:0000166 GO:GO:0032496 GO:GO:0006954
Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0030529 eggNOG:COG0724
HSSP:P09651 GO:GO:0070935 HOVERGEN:HBG002295
GeneTree:ENSGT00700000104255 HOGENOM:HOG000234442 CTD:10949
KO:K12894 OrthoDB:EOG4W6NX4 EMBL:AK019388 EMBL:AC165251
IPI:IPI00109813 RefSeq:NP_084148.1 UniGene:Mm.490274
ProteinModelPortal:Q9CX86 SMR:Q9CX86 STRING:Q9CX86
PhosphoSite:Q9CX86 PaxDb:Q9CX86 PRIDE:Q9CX86
Ensembl:ENSMUST00000007980 GeneID:77134 KEGG:mmu:77134
UCSC:uc007qtf.2 InParanoid:Q9CX86 OMA:EDNQHAL ChiTaRS:HNRNPA0
NextBio:346544 Bgee:Q9CX86 Genevestigator:Q9CX86 Uniprot:Q9CX86
Length = 305
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 91/178 (51%), Positives = 121/178 (67%)
Query: 4 EPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMV 63
E L KLFIGGL+ +TS L+ HFEA+G + D VV+ +PQTK+SR FGF+TYS+
Sbjct: 2 ENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEA 61
Query: 64 DDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQF 123
D A AA PH +D VE KRAV R + RP A A VKKLFVG L+ D+ E DL E+F QF
Sbjct: 62 DAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQF 121
Query: 124 GEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEM 181
G V ++ +K++GKKRGFGFV + +D DKA + H ++G +V+VKKA+ KE++
Sbjct: 122 GAVEKAEIIADKQSGKKRGFGFVYFQSHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 179
Score = 154 (59.3 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 30/83 (36%), Positives = 48/83 (57%)
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLK 160
KLF+G L +E L+ +F FG +T +V +T + R FGFV Y++ + D A
Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEADAAMAA 67
Query: 161 GTHLVKGKKVDVKKALSKEEMAK 183
H V G V++K+A+S+E+ A+
Sbjct: 68 SPHAVDGNTVELKRAVSREDSAR 90
Score = 152 (58.6 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 33/90 (36%), Positives = 48/90 (53%)
Query: 8 LRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQ 67
++KLF+GGL + L HF +G V ++ D Q+ K RGFGF+ + S D A
Sbjct: 97 VKKLFVGGLKGDVAEGDLIEHFSQFGAVEKAEIIADKQSGKKRGFGFVYFQSHDAADKAA 156
Query: 68 AARPHTIDSKVVEPKRAVPRTEINRPEAGA 97
+ H I VE K+AVP+ +I+ GA
Sbjct: 157 VVKFHPIQGHRVEVKKAVPKEDIHAGGGGA 186
>ZFIN|ZDB-GENE-030131-618 [details] [associations]
symbol:hnrnpa0l "heterogeneous nuclear
ribonucleoprotein A0, like" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030131-618
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HOVERGEN:HBG002295
GeneTree:ENSGT00700000104255 HOGENOM:HOG000234442 EMBL:BX088707
EMBL:BC050513 IPI:IPI00489762 UniGene:Dr.75590 UniGene:Dr.79301
SMR:Q7ZU48 STRING:Q7ZU48 Ensembl:ENSDART00000052511
InParanoid:Q7ZU48 OMA:ICRRIAP Uniprot:Q7ZU48
Length = 302
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 88/174 (50%), Positives = 123/174 (70%)
Query: 8 LRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQ 67
L KLF+GGL+ +T+ E L++HFE +G + D VV+ + ++SR FGF+TYSS D A
Sbjct: 5 LCKLFVGGLNVQTTDEGLRAHFEQYGQLTDCVVVMNQPLQRSRCFGFVTYSSTEEADAAM 64
Query: 68 AARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVT 127
+ARPH +D V+ KRAV R + +PE A VKK+FVG L+DDI +E L++YF QFG +
Sbjct: 65 SARPHIVDGNNVDLKRAVAREDAGKPEMLAKVKKIFVGGLKDDIEDEHLQDYFSQFGPIE 124
Query: 128 SVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEM 181
++T+K+TGKKRGFGFV ++D D DKA + H + G KV+VKKAL+K+EM
Sbjct: 125 KAQVITDKDTGKKRGFGFVYFDDNDSADKAVVMKFHSICGHKVEVKKALTKQEM 178
Score = 159 (61.0 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 31/83 (37%), Positives = 49/83 (59%)
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLK 160
KLFVG L T+E L+ +F Q+G++T +V + + R FGFV Y+ + D A
Sbjct: 7 KLFVGGLNVQTTDEGLRAHFEQYGQLTDCVVVMNQPLQRSRCFGFVTYSSTEEADAAMSA 66
Query: 161 GTHLVKGKKVDVKKALSKEEMAK 183
H+V G VD+K+A+++E+ K
Sbjct: 67 RPHIVDGNNVDLKRAVAREDAGK 89
Score = 132 (51.5 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 4 EPEHL---RKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSA 60
+PE L +K+F+GGL E L+ +F +G + V+ D T K RGFGF+ +
Sbjct: 89 KPEMLAKVKKIFVGGLKDDIEDEHLQDYFSQFGPIEKAQVITDKDTGKKRGFGFVYFDDN 148
Query: 61 HMVDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAG 96
D A + H+I VE K+A+ + E+ G
Sbjct: 149 DSADKAVVMKFHSICGHKVEVKKALTKQEMQSTGGG 184
>UNIPROTKB|F1N235 [details] [associations]
symbol:F1N235 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104376 EMBL:DAAA02006449 IPI:IPI01002976
Ensembl:ENSBTAT00000014868 OMA:LENGTGR Uniprot:F1N235
Length = 353
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 85/178 (47%), Positives = 128/178 (71%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
+E E KLFIG L T+ E+L +++ WG + D V+++DP ++KSR FGFIT+SS
Sbjct: 15 RENEQFCKLFIGDLSSETTEESLWNYYRQWGYLTDCVLIRDPASQKSRRFGFITFSSMAE 74
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
+D A AARPH ID K+V PKRAVPR + + A TVKKLFVG + +D+ E L++YF +
Sbjct: 75 LDAAMAARPHFIDGKMVMPKRAVPREDHGKLGALITVKKLFVGGITEDMKEHHLRDYFEK 134
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEE 180
+G++ ++ +VT+ ++GKKRGFGF+ ++D+DPVDK L+ H + G + +V+KALS++E
Sbjct: 135 YGKINAIEIVTDGQSGKKRGFGFITFDDHDPVDKIVLQKNHTINGHRAEVRKALSRQE 192
Score = 150 (57.9 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 30/84 (35%), Positives = 47/84 (55%)
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLK 160
KLF+G L + TEE L Y+ Q+G +T L+ + + K R FGF+ ++ +D A
Sbjct: 22 KLFIGDLSSETTEESLWNYYRQWGYLTDCVLIRDPASQKSRRFGFITFSSMAELDAAMAA 81
Query: 161 GTHLVKGKKVDVKKALSKEEMAKL 184
H + GK V K+A+ +E+ KL
Sbjct: 82 RPHFIDGKMVMPKRAVPREDHGKL 105
>UNIPROTKB|E2RF95 [details] [associations]
symbol:E2RF95 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 GeneTree:ENSGT00550000074566 EMBL:AAEX03008728
Ensembl:ENSCAFT00000001067 OMA:CTTATVE Uniprot:E2RF95
Length = 308
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 91/187 (48%), Positives = 127/187 (67%)
Query: 2 TKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAH 61
+K+PE LRKLFIGGL ++E+L+SH E WG + D VV +DP TK SRGFGFIT ++A
Sbjct: 7 SKDPEQLRKLFIGGLSLEITNESLRSHSEQWGMLTDRVVRRDPNTKGSRGFGFITCTTAT 66
Query: 62 M--VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEY 119
+ VD A ARPH +D +VVEPKRAV R + RP A TVKK FVG +++D E L++Y
Sbjct: 67 VEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKTFVGGIKEDTEEHHLRDY 126
Query: 120 FGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKE 179
F Q+G++ + ++ + +GK R F FV ++D+D VDK ++ H V G +VKKALSK+
Sbjct: 127 FEQYGKIEVIEIMIDPGSGK-RSFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVKKALSKQ 185
Query: 180 EMAKLKT 186
E + +
Sbjct: 186 EQTSVSS 192
>UNIPROTKB|E2RJS6 [details] [associations]
symbol:E2RJS6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 GeneTree:ENSGT00550000074566 EMBL:AAEX03015762
Ensembl:ENSCAFT00000024318 Uniprot:E2RJS6
Length = 316
Score = 459 (166.6 bits), Expect = 1.7e-43, P = 1.7e-43
Identities = 87/180 (48%), Positives = 128/180 (71%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE L KLFI GL + T+ E+L+SHFE WG + VVM+DP TK+SRGFGF+ +++
Sbjct: 8 KEPEQLWKLFIRGLSFETTDESLRSHFEQWGTLTGCVVMRDPNTKRSRGFGFVMFATVEE 67
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARP+ ++ +V+EPKR V R + RP A TVKK+FVG +++D TEE ++YF Q
Sbjct: 68 VDAAMNARPNKVNGRVLEPKRFVSREDSQRPAAYLTVKKIFVGGIKED-TEEH-EDYFEQ 125
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G+ + ++T++ +GKKRGF FV ++++D VD+ ++ H V G +V+KAL K+EMA
Sbjct: 126 YGKFEVIEVMTDQGSGKKRGFAFVTFDNHDSVDQIVIQKYHTVNGHSCEVRKALLKQEMA 185
Score = 130 (50.8 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 27/88 (30%), Positives = 50/88 (56%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ + KLF+ L + T+E L+ +F Q+G +T ++ + T + RGFGFV + +
Sbjct: 7 PKEPEQLWKLFIRGLSFETTDESLRSHFEQWGTLTGCVVMRDPNTKRSRGFGFVMFATVE 66
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEE 180
VD A + V G+ ++ K+ +S+E+
Sbjct: 67 EVDAAMNARPNKVNGRVLEPKRFVSRED 94
>UNIPROTKB|F1SCL3 [details] [associations]
symbol:LOC100522980 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 GeneTree:ENSGT00700000104376 EMBL:CU986279
RefSeq:XP_003123190.1 Ensembl:ENSSSCT00000014811 GeneID:100522980
KEGG:ssc:100522980 Uniprot:F1SCL3
Length = 354
Score = 459 (166.6 bits), Expect = 1.7e-43, P = 1.7e-43
Identities = 82/184 (44%), Positives = 129/184 (70%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
+E E RKLFIGGL T E+L+++++ WG + D VV++DP +++SRGFGF+ +SS
Sbjct: 15 RESEQFRKLFIGGLCSETKEESLRNYYQQWGKLTDCVVIRDPSSQRSRGFGFVIFSSVAE 74
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A AARPH+ID +VV KR VPR E +P A T KKLFVG +++D TE L++YF +
Sbjct: 75 VDAAMAARPHSIDGRVVASKRVVPREESGKPGACVTTKKLFVGGIKEDTTERHLRDYFER 134
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G + ++ ++ +++G+K FGFV ++D+DPVDK L+ H + G ++KALS++ M
Sbjct: 135 YGTIDAIEII--RQSGRKTAFGFVTFDDHDPVDKIVLQKYHTINGHHAQLEKALSRQGMQ 192
Query: 183 KLKT 186
++++
Sbjct: 193 EVQS 196
Score = 110 (43.8 bits), Expect = 0.00039, P = 0.00039
Identities = 24/97 (24%), Positives = 50/97 (51%)
Query: 9 RKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQA 68
+KLF+GG+ T+ L+ +FE +G + + +++ Q+ + FGF+T+ VD
Sbjct: 112 KKLFVGGIKEDTTERHLRDYFERYGTIDAIEIIR--QSGRKTAFGFVTFDDHDPVDKIVL 169
Query: 69 ARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVG 105
+ HTI+ + ++A+ R + ++ + VG
Sbjct: 170 QKYHTINGHHAQLEKALSRQGMQEVQSSRRGRGRHVG 206
>UNIPROTKB|F1SCM6 [details] [associations]
symbol:LOC100522063 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 GeneTree:ENSGT00700000104376 EMBL:CU986279
RefSeq:XP_003123185.1 Ensembl:ENSSSCT00000014807 GeneID:100522063
KEGG:ssc:100522063 Uniprot:F1SCM6
Length = 354
Score = 459 (166.6 bits), Expect = 1.7e-43, P = 1.7e-43
Identities = 82/184 (44%), Positives = 129/184 (70%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
+E E RKLFIGGL T E+L+++++ WG + D VV++DP +++SRGFGF+ +SS
Sbjct: 15 RESEQFRKLFIGGLCSETKEESLRNYYQQWGKLTDCVVIRDPSSQRSRGFGFVIFSSVAE 74
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A AARPH+ID +VV KR VPR E +P A T KKLFVG +++D TE L++YF +
Sbjct: 75 VDAAMAARPHSIDGRVVASKRVVPREESGKPGACVTTKKLFVGGIKEDTTERHLRDYFER 134
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G + ++ ++ +++G+K FGFV ++D+DPVDK L+ H + G ++KALS++ M
Sbjct: 135 YGTIDAIEII--RQSGRKTAFGFVTFDDHDPVDKIVLQKYHTINGHHAQLEKALSRQGMQ 192
Query: 183 KLKT 186
++++
Sbjct: 193 EVQS 196
Score = 110 (43.8 bits), Expect = 0.00039, P = 0.00039
Identities = 24/97 (24%), Positives = 50/97 (51%)
Query: 9 RKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQA 68
+KLF+GG+ T+ L+ +FE +G + + +++ Q+ + FGF+T+ VD
Sbjct: 112 KKLFVGGIKEDTTERHLRDYFERYGTIDAIEIIR--QSGRKTAFGFVTFDDHDPVDKIVL 169
Query: 69 ARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVG 105
+ HTI+ + ++A+ R + ++ + VG
Sbjct: 170 QKYHTINGHHAQLEKALSRQGMQEVQSSRRRRGRHVG 206
>UNIPROTKB|F1M117 [details] [associations]
symbol:F1M117 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC128353
EMBL:AC111733 IPI:IPI00558412 Ensembl:ENSRNOT00000023321
Uniprot:F1M117
Length = 366
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 88/179 (49%), Positives = 122/179 (68%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFIGGL + T+ ++L+ HFE G + D VVM+DPQTK SRGFGF+T S
Sbjct: 30 KEPEQLRKLFIGGLSFETTDDSLREHFEKRGTLTDCVVMRDPQTKHSRGFGFVTSSCVEE 89
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARPH +D +VVEPKRAV R + +P A VKK+FVG +++D E +L++YF +
Sbjct: 90 VDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLMVKKIFVGGIKEDTEEYNLRDYFEK 149
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEM 181
+G+ ++ + +KRGF FV ++D D VDK ++ H + G +VK+ALSK+EM
Sbjct: 150 YGKTETIE--GRQAEWEKRGFAFVTFDDQDTVDKIVVQKHHTINGHNCEVKRALSKQEM 206
Score = 158 (60.7 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 33/97 (34%), Positives = 57/97 (58%)
Query: 87 RTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFV 146
R E + P+ ++KLF+G L + T++ L+E+F + G +T ++ + +T RGFGFV
Sbjct: 23 RMEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKRGTLTDCVVMRDPQTKHSRGFGFV 82
Query: 147 EYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMAK 183
+ + VD A H V G+ V+ K+A+S+E+ K
Sbjct: 83 TSSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVK 119
>UNIPROTKB|F1M5L3 [details] [associations]
symbol:F1M5L3 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC128353
EMBL:AC111733 IPI:IPI00358908 Ensembl:ENSRNOT00000041535
Uniprot:F1M5L3
Length = 364
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 88/179 (49%), Positives = 122/179 (68%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFIGGL + T+ ++L+ HFE G + D VVM+DPQTK SRGFGF+T S
Sbjct: 30 KEPEQLRKLFIGGLSFETTDDSLREHFEKRGTLTDCVVMRDPQTKHSRGFGFVTSSCVEE 89
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARPH +D +VVEPKRAV R + +P A VKK+FVG +++D E +L++YF +
Sbjct: 90 VDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLMVKKIFVGGIKEDTEEYNLRDYFEK 149
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEM 181
+G+ ++ + +KRGF FV ++D D VDK ++ H + G +VK+ALSK+EM
Sbjct: 150 YGKTETIE--GRQAEWEKRGFAFVTFDDQDTVDKIVVQKHHTINGHNCEVKRALSKQEM 206
Score = 158 (60.7 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 33/97 (34%), Positives = 57/97 (58%)
Query: 87 RTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFV 146
R E + P+ ++KLF+G L + T++ L+E+F + G +T ++ + +T RGFGFV
Sbjct: 23 RMEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKRGTLTDCVVMRDPQTKHSRGFGFV 82
Query: 147 EYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMAK 183
+ + VD A H V G+ V+ K+A+S+E+ K
Sbjct: 83 TSSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVK 119
>UNIPROTKB|E2RJS4 [details] [associations]
symbol:E2RJS4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 GeneTree:ENSGT00550000074566 EMBL:AAEX03011786
Ensembl:ENSCAFT00000024319 Uniprot:E2RJS4
Length = 330
Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 92/188 (48%), Positives = 129/188 (68%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
K+PE L+KLFIGGL + T++E+L+SHFE G + D V M+DP TK SRGFGF+TY++
Sbjct: 22 KDPEQLQKLFIGGLSFETTNESLRSHFEQLGMLTDCVEMRDPNTKHSRGFGFVTYATMEE 81
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDI--TEE-DLKEY 119
VD A ARPH +D +VVEPKRAV R + RP A T+KK +D TEE L++Y
Sbjct: 82 VDAATNARPHKVD-RVVEPKRAVSREDSQRPGAHLTMKKKEEEEEEEDDNNTEEYHLRDY 140
Query: 120 FGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKE 179
F Q+G++ + ++T++ +GKKRGF FV ++D+D VDK ++ H V G +V+KALSK+
Sbjct: 141 FEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 200
Query: 180 EMAKLKTR 187
EMA +
Sbjct: 201 EMASASAK 208
Score = 135 (52.6 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 31/88 (35%), Positives = 48/88 (54%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ ++KLF+G L + T E L+ +F Q G +T + + T RGFGFV Y +
Sbjct: 21 PKDPEQLQKLFIGGLSFETTNESLRSHFEQLGMLTDCVEMRDPNTKHSRGFGFVTYATME 80
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEE 180
VD A H V + V+ K+A+S+E+
Sbjct: 81 EVDAATNARPHKVD-RVVEPKRAVSRED 107
>UNIPROTKB|D4AB76 [details] [associations]
symbol:D4AB76 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 IPI:IPI00558881 ProteinModelPortal:D4AB76
Ensembl:ENSRNOT00000043240 Uniprot:D4AB76
Length = 306
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 91/181 (50%), Positives = 126/181 (69%)
Query: 2 TKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAH 61
TKEPE L KLFIGGL ++T+ E+L+SHFE WG + D V M+DP K SRGFGF+TY++
Sbjct: 7 TKEPEQLWKLFIGGLSFKTTDESLRSHFEQWGTLTDCV-MRDPNNKISRGFGFVTYTTVE 65
Query: 62 MVDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFG 121
+D A ARPH +D VVEPKRAV R + RP A TVKK+FVG +++D TE +F
Sbjct: 66 ELDAAMNARPHKVDGGVVEPKRAVSREDSPRPGAHLTVKKIFVG-VKED-TEG---HHFE 120
Query: 122 QFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEM 181
Q+G++ + ++T++ +GKKRGF FV ++D D VD ++ H V G +V+KALS +E+
Sbjct: 121 QYGKIEVIEIMTDRGSGKKRGFAFVTFDDPDSVDTIVIQKYHTVNGHNCEVRKALSNQEL 180
Query: 182 A 182
A
Sbjct: 181 A 181
>UNIPROTKB|F1LUM4 [details] [associations]
symbol:F1LUM4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00389838
ProteinModelPortal:F1LUM4 Ensembl:ENSRNOT00000031839 Uniprot:F1LUM4
Length = 209
Score = 453 (164.5 bits), Expect = 7.3e-43, P = 7.3e-43
Identities = 81/171 (47%), Positives = 120/171 (70%)
Query: 11 LFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAAR 70
L IGGL + T+ ++L+ H E WG + D VVM DPQT+ SRGFGF+TYS VD A A
Sbjct: 1 LLIGGLSFETTDDSLREHSEKWGTLTDCVVMTDPQTEHSRGFGFVTYSCVEEVDAAMCAW 60
Query: 71 PHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVA 130
PH +D +VVEPKRAV R + +P A TVKK+FVG +++D E +L++YF ++G++ ++
Sbjct: 61 PHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIE 120
Query: 131 LVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEM 181
++ ++++GKKRGF FV ++D+D VDK + H + +VKKA+SK+EM
Sbjct: 121 VMEDRQSGKKRGFAFVTFDDHDTVDKIVFQEHHAINRHNCEVKKAVSKQEM 171
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 29/82 (35%), Positives = 50/82 (60%)
Query: 102 LFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKG 161
L +G L + T++ L+E+ ++G +T ++T+ +T RGFGFV Y+ + VD A
Sbjct: 1 LLIGGLSFETTDDSLREHSEKWGTLTDCVVMTDPQTEHSRGFGFVTYSCVEEVDAAMCAW 60
Query: 162 THLVKGKKVDVKKALSKEEMAK 183
H V G+ V+ K+A+S+E+ K
Sbjct: 61 PHKVDGRVVEPKRAVSREDSVK 82
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 33/98 (33%), Positives = 51/98 (52%)
Query: 3 KEPEHL--RKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSA 60
K HL +K+F+GG+ T L+ +FE +G + + VM+D Q+ K RGF F+T+
Sbjct: 82 KPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDH 141
Query: 61 HMVDDAQAARPHTIDSKVVEPKRAVPRTEINR--PEAG 96
VD H I+ E K+AV + E+ P+ G
Sbjct: 142 DTVDKIVFQEHHAINRHNCEVKKAVSKQEMQSAGPQRG 179
>UNIPROTKB|F1M6C7 [details] [associations]
symbol:F1M6C7 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104376 IPI:IPI00370270
Ensembl:ENSRNOT00000014756 Uniprot:F1M6C7
Length = 273
Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
Identities = 85/178 (47%), Positives = 122/178 (68%)
Query: 5 PEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVD 64
PE LRKLFIGGL ++T++E+L+SHFE W + D V M+DP TK+SRGFGF+TY++ VD
Sbjct: 1 PEQLRKLFIGGLSFKTTNESLRSHFEQWRTLTDCVEMRDPNTKRSRGFGFVTYTTVEEVD 60
Query: 65 DAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFG 124
A ARPH +D VEPKRAV R + P A TVK++ VG +++D E L++YF +G
Sbjct: 61 AAMNARPHKVDGSFVEPKRAVSREDSQSPGAHLTVKEISVGGIKEDTEEHHLRDYFEHYG 120
Query: 125 EVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
++ + ++T++ +GKK F FV ++D+D VDK ++ H V G + ALSK+EMA
Sbjct: 121 KIEVIEIMTDRGSGKKE-FAFVTFDDHDSVDKIVIQKYHTVNGHNCETV-ALSKQEMA 176
>UNIPROTKB|F1LYN9 [details] [associations]
symbol:F1LYN9 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00368496
Ensembl:ENSRNOT00000035403 Uniprot:F1LYN9
Length = 263
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 84/173 (48%), Positives = 119/173 (68%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
KLFIGGL + T+ ++L+SHFE W + D V+M+DP +K+SRGFG I Y++ VD A A
Sbjct: 1 KLFIGGLSFETTDKSLRSHFEQWETLTDCVLMRDPNSKRSRGFGLIAYATVEEVDAAMNA 60
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
RPH +D +VVEPK AV R + +RP A TVKK+FVG ++D E L+ YF Q+G++ +
Sbjct: 61 RPHKVDGRVVEPKVAVSREDSHRPGAHLTVKKIFVGGSKEDTEEHHLRVYFEQYGKIEVI 120
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
++T+ +GKKRGF FV ++D D VD ++ H V G +V+KAL K+EMA
Sbjct: 121 EIMTDIGSGKKRGFAFVTFDDQDSVDNIVIQKYHTVNGHNCEVRKALLKQEMA 173
Score = 125 (49.1 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 24/83 (28%), Positives = 46/83 (55%)
Query: 8 LRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQ 67
++K+F+GG T L+ +FE +G + + +M D + K RGF F+T+ VD+
Sbjct: 90 VKKIFVGGSKEDTEEHHLRVYFEQYGKIEVIEIMTDIGSGKKRGFAFVTFDDQDSVDNIV 149
Query: 68 AARPHTIDSKVVEPKRAVPRTEI 90
+ HT++ E ++A+ + E+
Sbjct: 150 IQKYHTVNGHNCEVRKALLKQEM 172
>UNIPROTKB|F1NCI5 [details] [associations]
symbol:HNRNPA0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006954 "inflammatory
response" evidence=IEA] [GO:0017091 "AU-rich element binding"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0032496 "response to lipopolysaccharide" evidence=IEA]
[GO:0070935 "3'-UTR-mediated mRNA stabilization" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 GO:GO:0006954
Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0070935
GeneTree:ENSGT00700000104255 OMA:EDNQHAL EMBL:AADN02028465
IPI:IPI00573116 Ensembl:ENSGALT00000009947 Uniprot:F1NCI5
Length = 328
Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
Identities = 87/178 (48%), Positives = 121/178 (67%)
Query: 4 EPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMV 63
E L KLFIGGL+ +T+ L+ HF A+G + D VV+ +PQTK+SR FGF+TYS+
Sbjct: 23 ENSQLCKLFIGGLNVQTTEAGLREHFAAYGTLTDCVVVLNPQTKRSRCFGFVTYSAVEEA 82
Query: 64 DDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQF 123
D A AA PH +D VE KRAV R + +P A A VKKLFVG L+ D+ E DL ++F QF
Sbjct: 83 DAAMAASPHAVDGNSVELKRAVSREDSAKPGAHAKVKKLFVGGLKGDVGEGDLVQHFSQF 142
Query: 124 GEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEM 181
G V ++ +K++GKKRGFGFV + ++D DKA + H ++G +V+VKKA+ KE++
Sbjct: 143 GPVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 200
Score = 163 (62.4 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 32/83 (38%), Positives = 48/83 (57%)
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLK 160
KLF+G L TE L+E+F +G +T +V +T + R FGFV Y+ + D A
Sbjct: 29 KLFIGGLNVQTTEAGLREHFAAYGTLTDCVVVLNPQTKRSRCFGFVTYSAVEEADAAMAA 88
Query: 161 GTHLVKGKKVDVKKALSKEEMAK 183
H V G V++K+A+S+E+ AK
Sbjct: 89 SPHAVDGNSVELKRAVSREDSAK 111
Score = 146 (56.5 bits), Expect = 9.7e-10, P = 9.7e-10
Identities = 31/90 (34%), Positives = 46/90 (51%)
Query: 8 LRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQ 67
++KLF+GGL L HF +G V ++ D Q+ K RGFGF+ + + D A
Sbjct: 118 VKKLFVGGLKGDVGEGDLVQHFSQFGPVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAA 177
Query: 68 AARPHTIDSKVVEPKRAVPRTEINRPEAGA 97
+ H I VE K+AVP+ +I G+
Sbjct: 178 VVKFHPIQGHRVEVKKAVPKEDIQAGGGGS 207
>UNIPROTKB|F1LW71 [details] [associations]
symbol:F1LW71 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 IPI:IPI00563710 ProteinModelPortal:F1LW71
Ensembl:ENSRNOT00000048553 Uniprot:F1LW71
Length = 260
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 86/180 (47%), Positives = 122/180 (67%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLF GGL++ T+ E+L+SHFE WG + D VVM+DP TK+SRGFGF+TY+
Sbjct: 15 KEPEQLRKLFTGGLNFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYAPVEE 74
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD + HT + + RAV R + P A TVKK+FVG +++D E L++Y Q
Sbjct: 75 VD----RKDHTRWMEELWNLRAVSREDSQTPGAHLTVKKIFVGGIKEDTEEHHLRDYSEQ 130
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G++ V ++T++ +GKK GF FV ++D+D VDK ++ H V G +V+KALSK+EMA
Sbjct: 131 YGKIEVVEIMTDRGSGKKGGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMA 190
>UNIPROTKB|F1MW51 [details] [associations]
symbol:F1MW51 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00550000074566 EMBL:DAAA02008023 IPI:IPI00696055
Ensembl:ENSBTAT00000016590 Uniprot:F1MW51
Length = 274
Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
Identities = 84/180 (46%), Positives = 125/180 (69%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFIGGL + T+ E+L+S FE G + D VV +DP K+SRGFGF+TY++
Sbjct: 8 KEPEQLRKLFIGGLSFETTDESLRSRFEQGGTLTDCVVRRDPNAKRSRGFGFVTYAT--- 64
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
V++ + RPH +D +VVEPK A+ R + RP A VKK+FVG +++D E L++YF Q
Sbjct: 65 VEEVKG-RPH-VDERVVEPKWAISREDSQRPGAHLPVKKVFVGGIKEDTEEHHLRDYFEQ 122
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G + + ++T++ +GK RGF F+ ++D+D +DK ++ H G +V+KALSK+EMA
Sbjct: 123 YGRIEVIEIMTDQGSGK-RGFAFILFDDHDSIDKIVIQKYHTGNGLNCEVRKALSKQEMA 181
Score = 118 (46.6 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 30/93 (32%), Positives = 48/93 (51%)
Query: 88 TEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVE 147
+E P+ ++KLF+G L + T+E L+ F Q G +T + + + RGFGFV
Sbjct: 2 SESESPKEPEQLRKLFIGGLSFETTDESLRSRFEQGGTLTDCVVRRDPNAKRSRGFGFVT 61
Query: 148 YNDYDPVDKACLKGTHLVKGKKVDVKKALSKEE 180
Y + V KG V + V+ K A+S+E+
Sbjct: 62 YATVEEV-----KGRPHVDERVVEPKWAISRED 89
>UNIPROTKB|F1MTY3 [details] [associations]
symbol:F1MTY3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 GeneTree:ENSGT00550000074566 EMBL:DAAA02006340
IPI:IPI00699446 Ensembl:ENSBTAT00000013110 Uniprot:F1MTY3
Length = 301
Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
Identities = 87/180 (48%), Positives = 117/180 (65%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEP LRKLFIGGL + T+ E+L+SH V M DP TK SRGF F+TY++
Sbjct: 8 KEPGQLRKLFIGGLSFETTDESLRSHCSHSPSCV----MTDPNTKCSRGFRFVTYATVEE 63
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARPH +D +VVEPKR V R RP A TVKK+F G +++D E L++YF
Sbjct: 64 VDAAMNARPHKVDRRVVEPKRGVSREGSQRPGAHLTVKKIFAGGIKEDTEERHLRDYFEN 123
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
G++ + ++T+ +GKKRGF FV ++D+D VDK ++ H V G +V+KALSK+EMA
Sbjct: 124 NGKIEVIEIMTDPSSGKKRGFAFVTFDDHDSVDKTVIQKYHTVNGHNREVRKALSKQEMA 183
>UNIPROTKB|F1M3H8 [details] [associations]
symbol:F1M3H8 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 GO:GO:0032496 GO:GO:0006954
Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0070935
GeneTree:ENSGT00700000104255 IPI:IPI00777708
ProteinModelPortal:F1M3H8 PRIDE:F1M3H8 Ensembl:ENSRNOT00000061231
Uniprot:F1M3H8
Length = 194
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 84/171 (49%), Positives = 115/171 (67%)
Query: 11 LFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAAR 70
+ IG + +TS L+ HFEA+G + D VV+ +PQTK+SR FGF+TYS+ D A AA
Sbjct: 9 VLIGEXNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEADAAMAAS 68
Query: 71 PHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVA 130
PH +D VE KRAV R + RP A A VKKLFVG L+ D+ E DL E+F QFG V
Sbjct: 69 PHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGAVEKAE 128
Query: 131 LVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEM 181
++ +K++GKKRGFGFV + +D DKA + H ++G +V+VKKA+ KE++
Sbjct: 129 IIADKQSGKKRGFGFVYFQSHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 179
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 31/83 (37%), Positives = 45/83 (54%)
Query: 8 LRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQ 67
++KLF+GGL + L HF +G V ++ D Q+ K RGFGF+ + S D A
Sbjct: 97 VKKLFVGGLKGDVAEGDLIEHFSQFGAVEKAEIIADKQSGKKRGFGFVYFQSHDAADKAA 156
Query: 68 AARPHTIDSKVVEPKRAVPRTEI 90
+ H I VE K+AVP+ +I
Sbjct: 157 VVKFHPIQGHRVEVKKAVPKEDI 179
Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 29/91 (31%), Positives = 50/91 (54%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P A A++ + +G +E L+ +F FG +T +V +T + R FGFV Y++ +
Sbjct: 1 PSA-ASLCGVLIGEXNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVE 59
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEEMAK 183
D A H V G V++K+A+S+E+ A+
Sbjct: 60 EADAAMAASPHAVDGNTVELKRAVSREDSAR 90
>UNIPROTKB|F1PP12 [details] [associations]
symbol:F1PP12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00550000074566 EMBL:AAEX03007418
ProteinModelPortal:F1PP12 Ensembl:ENSCAFT00000029311 Uniprot:F1PP12
Length = 229
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 81/184 (44%), Positives = 123/184 (66%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEP+ L +LFI GL++ T++E+L+ HF+ WG ++D VVM DP T+ SR FGF+ Y++
Sbjct: 8 KEPKQLWRLFIRGLNFETTNESLRGHFKQWGILMDCVVMIDPNTRHSRRFGFVMYATVEK 67
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A RPH ++ ++ +PK AV R + RP A T KK FVG +++D E L+ YF Q
Sbjct: 68 VDAAVNVRPHKVN-RIGKPKMAVSREDSQRPGAHLTGKKTFVGGIKEDTEEHHLRHYFEQ 126
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+GE+ + ++T++ + KKRGF FV +D+D +DK ++ H V G +V++ALSK+EMA
Sbjct: 127 YGEIRMIEIMTDQGSDKKRGFAFVTCDDHDSIDKIVIQKQHTVNGHNYEVRRALSKQEMA 186
Query: 183 KLKT 186
T
Sbjct: 187 SAST 190
>UNIPROTKB|F1LYB2 [details] [associations]
symbol:F1LYB2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00563016
Ensembl:ENSRNOT00000051535 Uniprot:F1LYB2
Length = 261
Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 82/179 (45%), Positives = 121/179 (67%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KE EHL KLFIG L + T+ ++L+ H E W + D VVM+DP ++S GFGF+TYS
Sbjct: 18 KESEHLTKLFIGYLSFETTDDSLREHSEKW-TLTDCVVMRDPLFERSSGFGFVTYSCVEE 76
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARPH +D +VV P RAV R + +P TVKK+FVG +R+D E +LK+YF +
Sbjct: 77 VDAAMCARPHKVDGRVVGP-RAVSREDSVKPGTHLTVKKIFVGGVREDREEYNLKDYFEK 135
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEM 181
+G++ ++ ++ ++++GKKRGF FV ++D D VDK ++ H + G ++KK LSK+ M
Sbjct: 136 YGKIGTIDVMEDRQSGKKRGFAFVTFDDLDTVDKIAVQKYHTINGHNCEMKKVLSKQGM 194
Score = 110 (43.8 bits), Expect = 0.00021, P = 0.00021
Identities = 28/97 (28%), Positives = 52/97 (53%)
Query: 87 RTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFV 146
+ E + P+ + KLF+G L + T++ L+E+ ++ +T ++ + + GFGFV
Sbjct: 11 KMEGHDPKESEHLTKLFIGYLSFETTDDSLREHSEKW-TLTDCVVMRDPLFERSSGFGFV 69
Query: 147 EYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMAK 183
Y+ + VD A H V G+ V +A+S+E+ K
Sbjct: 70 TYSCVEEVDAAMCARPHKVDGRVVG-PRAVSREDSVK 105
>UNIPROTKB|E2QXH4 [details] [associations]
symbol:HNRNPA2B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104376 EMBL:AAEX03009384
ProteinModelPortal:E2QXH4 Ensembl:ENSCAFT00000004613 Uniprot:E2QXH4
Length = 301
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 75/146 (51%), Positives = 113/146 (77%)
Query: 41 MKDPQTKKSRGFGFITYSSAHMVDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVK 100
M+DP +K+SRGFGF+T+SS VD A AARPH+ID +VVEPKRAV R E +P A TVK
Sbjct: 1 MRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVK 60
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLK 160
KLFVG +++D E L++YF ++G++ ++ ++T++++GKKRGFGFV ++D+DPVDK L+
Sbjct: 61 KLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQ 120
Query: 161 GTHLVKGKKVDVKKALSKEEMAKLKT 186
H + G +V+KALS++EM ++++
Sbjct: 121 KYHTINGHNAEVRKALSRQEMQEVQS 146
Score = 148 (57.2 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 28/88 (31%), Positives = 50/88 (56%)
Query: 8 LRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQ 67
++KLF+GG+ T L+ +FE +G + + ++ D Q+ K RGFGF+T+ VD
Sbjct: 59 VKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIV 118
Query: 68 AARPHTIDSKVVEPKRAVPRTEINRPEA 95
+ HTI+ E ++A+ R E+ ++
Sbjct: 119 LQKYHTINGHNAEVRKALSRQEMQEVQS 146
>UNIPROTKB|F1LZZ2 [details] [associations]
symbol:F1LZZ2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104376 IPI:IPI00556964
Ensembl:ENSRNOT00000044311 OMA:KERREDT Uniprot:F1LZZ2
Length = 294
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 81/172 (47%), Positives = 116/172 (67%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFIGGL + T+ +L+ HFE WG + D VVM+DPQ K SRGF F+TYS
Sbjct: 31 KEPEQLRKLFIGGLSFETTDGSLREHFEKWGTLTDCVVMRDPQRKCSRGFSFVTYSCVEE 90
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
V ARPH + VVEPKRAV R + P A V+K+FVG +++D E +L++YF +
Sbjct: 91 VGAVMCARPHKVVGCVVEPKRAVSREDSIIPGAHLMVEKIFVGGIKEDTEEYNLRDYFEK 150
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKK 174
+G++ ++ ++ ++++GKKRGF FV ++++D VDK K H V G +VK+
Sbjct: 151 YGKIETIEVMEDRQSGKKRGFAFVTFDNHDTVDKVVQK-YHTVNGHNCEVKE 201
Score = 128 (50.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 27/88 (30%), Positives = 49/88 (55%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ ++KLF+G L + T+ L+E+F ++G +T ++ + + RGF FV Y+ +
Sbjct: 30 PKEPEQLRKLFIGGLSFETTDGSLREHFEKWGTLTDCVVMRDPQRKCSRGFSFVTYSCVE 89
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEE 180
V H V G V+ K+A+S+E+
Sbjct: 90 EVGAVMCARPHKVVGCVVEPKRAVSRED 117
>UNIPROTKB|F1LVU1 [details] [associations]
symbol:F1LVU1 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00950080
Ensembl:ENSRNOT00000064004 Uniprot:F1LVU1
Length = 188
Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 84/179 (46%), Positives = 124/179 (69%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LR+LFIGGL + T ++L+ FE G + D VVM+DPQ+ FGF+TYS
Sbjct: 1 KEPEQLRRLFIGGLSFETIEDSLREGFEM-GTLADCVVMRDPQS-----FGFVTYSCVEE 54
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARPH +D +VVEPKRAV R + +P A TVK +FVG +++D E +L++YF +
Sbjct: 55 VDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVK-IFVGGIKEDAEEYNLRDYFEK 113
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEM 181
+G++ ++ ++ ++++GKKRGF FV ++D+D VDK + H + G +V+KALSK+EM
Sbjct: 114 YGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVN-YHTINGHNCEVRKALSKQEM 171
Score = 112 (44.5 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 26/85 (30%), Positives = 48/85 (56%)
Query: 99 VKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKAC 158
+++LF+G L + E+ L+E F + G + ++ + ++ FGFV Y+ + VD A
Sbjct: 6 LRRLFIGGLSFETIEDSLREGF-EMGTLADCVVMRDPQS-----FGFVTYSCVEEVDAAM 59
Query: 159 LKGTHLVKGKKVDVKKALSKEEMAK 183
H V G+ V+ K+A+S+E+ K
Sbjct: 60 CARPHKVDGRVVEPKRAVSREDSVK 84
>UNIPROTKB|D4ACP9 [details] [associations]
symbol:D4ACP9 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00388048
ProteinModelPortal:D4ACP9 Ensembl:ENSRNOT00000002123 Uniprot:D4ACP9
Length = 253
Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
Identities = 82/186 (44%), Positives = 123/186 (66%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KE E L KLFIGGL + TS ++L+ HFE W + VVM DPQTK+SR FGF+TYS
Sbjct: 7 KEQEQLSKLFIGGLSFETSDDSLREHFEQWDMLTHCVVM-DPQTKRSRVFGFVTYSCVKE 65
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARPH +D VVEPKR R + +P KK+F+G +++D E +L++YF +
Sbjct: 66 VDAAMCARPHKVDGCVVEPKRPF-REDSVKPVVCLLAKKIFIGGIKEDTEEHNLRDYFEK 124
Query: 123 FGEVTSVALVTE-KETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEM 181
+G++ ++ ++ E +++G+KRGF FV ++D+ VDK ++ H + DVKKA SK+EM
Sbjct: 125 YGKIETIEIMEEDRQSGEKRGFAFVTFDDHYTVDKIVVQKCHTINRHNCDVKKAPSKQEM 184
Query: 182 AKLKTR 187
++++
Sbjct: 185 PSVRSQ 190
Score = 120 (47.3 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 30/95 (31%), Positives = 51/95 (53%)
Query: 89 EINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEY 148
E + P+ + KLF+G L + +++ L+E+F Q+ +T +V + +T + R FGFV Y
Sbjct: 2 EGHNPKEQEQLSKLFIGGLSFETSDDSLREHFEQWDMLTH-CVVMDPQTKRSRVFGFVTY 60
Query: 149 NDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMAK 183
+ VD A H V G V+ K+ +E+ K
Sbjct: 61 SCVKEVDAAMCARPHKVDGCVVEPKRPF-REDSVK 94
>UNIPROTKB|D4A8U2 [details] [associations]
symbol:D4A8U2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00947740
ProteinModelPortal:D4A8U2 Ensembl:ENSRNOT00000064543
ArrayExpress:D4A8U2 Uniprot:D4A8U2
Length = 196
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 77/159 (48%), Positives = 114/159 (71%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFIGGL + + ++L+ HFE WG + D VVM+DPQTK+SR F F+TYS
Sbjct: 7 KEPEQLRKLFIGGLSFEATDDSLREHFEKWGTLTDCVVMRDPQTKRSRSFSFVTYSCVKE 66
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A A+PH +D +VVEPKRAV R + +P A TVKK+FVG +++D E +L++YF +
Sbjct: 67 VDAAMCAQPHNVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEK 126
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKG 161
+G++ ++ ++ ++ +GK+R FV ++D+D VDK +G
Sbjct: 127 YGKIKTMEVMEDRLSGKERLL-FVTFDDHDTVDKIVGRG 164
Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 30/91 (32%), Positives = 54/91 (59%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ ++KLF+G L + T++ L+E+F ++G +T ++ + +T + R F FV Y+
Sbjct: 6 PKEPEQLRKLFIGGLSFEATDDSLREHFEKWGTLTDCVVMRDPQTKRSRSFSFVTYSCVK 65
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEEMAK 183
VD A H V G+ V+ K+A+S+E+ K
Sbjct: 66 EVDAAMCAQPHNVDGRVVEPKRAVSREDSVK 96
>UNIPROTKB|F1M4M4 [details] [associations]
symbol:F1M4M4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 GeneTree:ENSGT00550000074566 IPI:IPI00558004
Ensembl:ENSRNOT00000049169 Uniprot:F1M4M4
Length = 255
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 81/180 (45%), Positives = 121/180 (67%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFIGGL +RT+ E+L+SHFE W ++ VVM+DP T++SRG GF TY++
Sbjct: 13 KEPEQLRKLFIGGLSFRTTEESLRSHFEQWATLITCVVMRDPNTERSRGSGFDTYTTVEE 72
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
+D A ARPH +D +VV R + RP A TVK +F+ +++D E L++YF Q
Sbjct: 73 MDAAMNARPHKVDGRVVS------REDSQRPGAHLTVK-IFISGIKEDTEEHHLRDYFEQ 125
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+ ++ + ++T++ + KKR F FV ++++D VDK ++ H V G +V+KALSK+EMA
Sbjct: 126 YRKIEVIEIMTDRGSRKKRDFAFVTFDEHDSVDKIFIQKYHTVNGHNCEVRKALSKQEMA 185
>UNIPROTKB|F1M0H6 [details] [associations]
symbol:F1M0H6 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00766574
Ensembl:ENSRNOT00000044621 Uniprot:F1M0H6
Length = 360
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 85/179 (47%), Positives = 120/179 (67%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFIGGL + T+ ++L+ HF+ G + D VVM+DPQTK SRGFGF+TYS
Sbjct: 26 KEPEQLRKLFIGGLSFETADDSLREHFKKRGTLTDCVVMRDPQTKCSRGFGFVTYSCVEE 85
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A A H +D +VVEPK+AV R + + A VKK FVG +++D E +LK+YF +
Sbjct: 86 VDAAMCAWLHKVDGRVVEPKKAVSREDSVKLGAHLMVKKTFVGGIKEDTEEYNLKDYFEK 145
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEM 181
+G++ + + +++G+ RGF F + D+D VDK ++ H + G +VKKALSK EM
Sbjct: 146 YGKIETEGM-ENRQSGR-RGFAFAIFGDHD-VDKIVVQKHHTINGHNCEVKKALSKLEM 201
Score = 163 (62.4 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 33/92 (35%), Positives = 55/92 (59%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ ++KLF+G L + ++ L+E+F + G +T ++ + +T RGFGFV Y+ +
Sbjct: 25 PKEPEQLRKLFIGGLSFETADDSLREHFKKRGTLTDCVVMRDPQTKCSRGFGFVTYSCVE 84
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEEMAKL 184
VD A H V G+ V+ KKA+S+E+ KL
Sbjct: 85 EVDAAMCAWLHKVDGRVVEPKKAVSREDSVKL 116
Score = 109 (43.4 bits), Expect = 0.00054, P = 0.00054
Identities = 26/84 (30%), Positives = 46/84 (54%)
Query: 8 LRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQ 67
++K F+GG+ T LK +FE +G + + M++ Q+ + RGF F + H VD
Sbjct: 122 VKKTFVGGIKEDTEEYNLKDYFEKYGKI-ETEGMENRQSGR-RGFAFAIFGD-HDVDKIV 178
Query: 68 AARPHTIDSKVVEPKRAVPRTEIN 91
+ HTI+ E K+A+ + E++
Sbjct: 179 VQKHHTINGHNCEVKKALSKLEMH 202
>UNIPROTKB|F1M165 [details] [associations]
symbol:F1M165 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 IPI:IPI00362409 Ensembl:ENSRNOT00000029622
Uniprot:F1M165
Length = 288
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 81/180 (45%), Positives = 119/180 (66%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFIGGL +RT+ E+L+SHFE W ++ VVM+DP T++SRG GF TY++
Sbjct: 9 KEPEQLRKLFIGGLSFRTTEESLRSHFEQWATLITCVVMRDPNTERSRGSGFDTYTTVEE 68
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
+D A ARPH +D +VV R + RP A TVK V +++D E L++YF Q
Sbjct: 69 MDAAMNARPHKVDGRVVS------REDSQRPGAHLTVKIFIVSGIKEDTEEHHLRDYFEQ 122
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+ ++ + ++T++ + KKR F FV ++++D VDK ++ H V G +V+KALSK+EMA
Sbjct: 123 YRKIEVIEIMTDRGSRKKRDFAFVTFDEHDSVDKIFIQKYHTVNGHNCEVRKALSKQEMA 182
>UNIPROTKB|D4A6Z0 [details] [associations]
symbol:D4A6Z0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00948011
ProteinModelPortal:D4A6Z0 Ensembl:ENSRNOT00000067831 Uniprot:D4A6Z0
Length = 176
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 77/159 (48%), Positives = 114/159 (71%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE RKLFIGGL + T+ ++L+ HF+ W + D VVM+DPQT++SRGFGF+ YS
Sbjct: 7 KEPEQRRKLFIGGLSFETTDDSLREHFK-WDTLTDCVVMRDPQTERSRGFGFV-YSCVEE 64
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARPH +D VVEPKRA+ R + +P A VKK+FVG +++D E +L++YF +
Sbjct: 65 VDAAMCARPHKVDGHVVEPKRAISREDSVKPGAHLMVKKIFVGGIKEDTEEYNLRDYF-E 123
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKG 161
+G + ++ +V ++++GKKRGF F+ ++D+D VDK +G
Sbjct: 124 YGNIKTIEVVEDRQSGKKRGFAFLTFDDHDTVDKIVGRG 162
Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 100 KKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACL 159
+KLF+G L + T++ L+E+F ++ +T ++ + +T + RGFGFV Y+ + VD A
Sbjct: 13 RKLFIGGLSFETTDDSLREHF-KWDTLTDCVVMRDPQTERSRGFGFV-YSCVEEVDAAMC 70
Query: 160 KGTHLVKGKKVDVKKALSKEEMAK 183
H V G V+ K+A+S+E+ K
Sbjct: 71 ARPHKVDGHVVEPKRAISREDSVK 94
>UNIPROTKB|F1PQB0 [details] [associations]
symbol:HNRNPA1L2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
InterPro:IPR021662 Pfam:PF11627 GeneTree:ENSGT00550000074566
EMBL:AAEX03003034 Ensembl:ENSCAFT00000027199 Uniprot:F1PQB0
Length = 314
Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
Identities = 82/180 (45%), Positives = 118/180 (65%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE L+KLFI GL + + E+L++HFE WG + D VVM+DP TK SRGFG +
Sbjct: 8 KEPEQLQKLFIRGLSFEITDESLRTHFEQWGTLTDYVVMRDPNTKCSRGFG-----AMEE 62
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A +RP + +V+EPKRAV + + RP TVKK+FVG +++D E L++YF Q
Sbjct: 63 VDAAMNSRPCKVGRRVLEPKRAVSQEDSPRPGVLLTVKKIFVGGIKEDTEEHHLRDYFEQ 122
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G++ + +T++ +GKKRGF FV ++D+D VDK ++ H G V+K L K+EMA
Sbjct: 123 YGKIEVIESMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHAANGHNRVVRKTLWKQEMA 182
Score = 110 (43.8 bits), Expect = 0.00031, P = 0.00031
Identities = 28/95 (29%), Positives = 52/95 (54%)
Query: 86 PRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGF 145
P++E P+ ++KLF+ L +IT+E L+ +F Q+G +T ++ + T RGFG
Sbjct: 2 PKSE--SPKEPEQLQKLFIRGLSFEITDESLRTHFEQWGTLTDYVVMRDPNTKCSRGFGA 59
Query: 146 VEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEE 180
+E D + C G ++ + K+A+S+E+
Sbjct: 60 MEEVDAAMNSRPCKVGRRVL-----EPKRAVSQED 89
>UNIPROTKB|D4ABW2 [details] [associations]
symbol:D4ABW2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 IPI:IPI00781059 ProteinModelPortal:D4ABW2
Ensembl:ENSRNOT00000044642 Uniprot:D4ABW2
Length = 279
Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 84/183 (45%), Positives = 120/183 (65%)
Query: 2 TKEPEHLRKLFIGGLDYRTSSETLK--SHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSS 59
+KEPE L+KLF+GGL + + E+L SHFE WG + D VVM+DP TK+SRGFGF+TY++
Sbjct: 7 SKEPEQLQKLFVGGLSFEATLESLSLTSHFEQWGTLTDHVVMRDPNTKRSRGFGFVTYAT 66
Query: 60 AHMVDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEY 119
VD A ARPH + + VEPKRA + + RP A T+KK+FVG +++D E L++Y
Sbjct: 67 VEEVDAAMNARPHKVGGRAVEPKRAGSK-DSQRPGAHLTMKKIFVGGVKEDTEEHRLRDY 125
Query: 120 FGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKE 179
Q G+ + T++ +GK R F FV +++ VDK ++ V G +V+KALSK+
Sbjct: 126 LEQNGKTEVTEITTDRGSGK-RDFAFVTFDN--SVDKIVIQKYSTVNGHNCEVRKALSKQ 182
Query: 180 EMA 182
EMA
Sbjct: 183 EMA 185
>UNIPROTKB|F1M7F0 [details] [associations]
symbol:F1M7F0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00563307
ProteinModelPortal:F1M7F0 Ensembl:ENSRNOT00000041604 Uniprot:F1M7F0
Length = 224
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 75/168 (44%), Positives = 112/168 (66%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE L KL IGGL ++T+ E+L++HFE WG D VVM+DP TK+SR GF+TY++
Sbjct: 17 KEPEQLHKLCIGGLIFKTTHESLRNHFEKWGTFTDCVVMRDPNTKRSRSSGFVTYNTVEE 76
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARP +D ++V+PKRAV R + RP TVKK+F G +++D E ++++YF
Sbjct: 77 VDAAMNARPQKMDGRLVKPKRAVSREDSQRPGTQLTVKKIFEGGIKEDTEEHNVRDYFEH 136
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKV 170
+G++ + ++T++ +GKK F V +D+D VDK ++ H V G V
Sbjct: 137 YGKIDMIEIMTDRSSGKKE-FALVPLDDHDSVDKIAIQKYHTVNGTTV 183
Score = 127 (49.8 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 31/103 (30%), Positives = 51/103 (49%)
Query: 85 VPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFG 144
VP I P+ + KL +G L T E L+ +F ++G T ++ + T + R G
Sbjct: 8 VPVHVIESPKEPEQLHKLCIGGLIFKTTHESLRNHFEKWGTFTDCVVMRDPNTKRSRSSG 67
Query: 145 FVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMAKLKTR 187
FV YN + VD A + G+ V K+A+S+E+ + T+
Sbjct: 68 FVTYNTVEEVDAAMNARPQKMDGRLVKPKRAVSREDSQRPGTQ 110
>UNIPROTKB|G3MYU0 [details] [associations]
symbol:G3MYU0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00550000074566 EMBL:DAAA02005585
Ensembl:ENSBTAT00000064368 Uniprot:G3MYU0
Length = 256
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 85/186 (45%), Positives = 119/186 (63%)
Query: 2 TKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAH 61
+K PE LRKLFI GL + T E+L SHFE G +VVM+ P TK SRGFGF+T
Sbjct: 19 SKSPEELRKLFIRGLSFETIDESLSSHFEM-GKAHRLVVMRVPNTKHSRGFGFVTKPWWR 77
Query: 62 MVDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFG 121
+ A ARPH +D +VVEPKR V R + RP A TVKK+FVG +++ E L+ F
Sbjct: 78 SLA-AMNARPHKVDERVVEPKRDVSRGDSQRPHAHLTVKKIFVGGIQEGTEEHHLRNNFE 136
Query: 122 QFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEM 181
Q+G++ + ++T++ + KKRGF F ++D+D VDK ++ H V G +V++ALSK+EM
Sbjct: 137 QYGKI-DIEIMTDRGSDKKRGFAFETFDDHDSVDKIVIQKYHTVNGHNCEVREALSKQEM 195
Query: 182 AKLKTR 187
A +R
Sbjct: 196 ASASSR 201
>UNIPROTKB|F1LUF2 [details] [associations]
symbol:F1LUF2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00550000074566 IPI:IPI00952415
Ensembl:ENSRNOT00000042380 Uniprot:F1LUF2
Length = 238
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 80/173 (46%), Positives = 112/173 (64%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
KLFIGGL + + E L+SHFE WG + + VVM+DP TK+S GFGF+TY++ VD A
Sbjct: 1 KLFIGGLSFEKTDEGLRSHFEQWGTLTNSVVMRDPNTKRSGGFGFVTYATVEEVDAAMNE 60
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
RPH +D +V+EPKRAV R + R TVKK+FVG +++D E L++YF Q+G++
Sbjct: 61 RPHKVDERVLEPKRAVSREDSERTGTHLTVKKIFVGVVKEDTEEHHLRDYFEQYGKI--- 117
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+ KK GF F ++D+D VDK ++ H V G +V+K LSK+EMA
Sbjct: 118 -----QRQWKKEGFCFFTFDDHDSVDKIVIQKYHTVGGHTCEVRKPLSKQEMA 165
Score = 140 (54.3 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 29/86 (33%), Positives = 51/86 (59%)
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLK 160
KLF+G L + T+E L+ +F Q+G +T+ ++ + T + GFGFV Y + VD A +
Sbjct: 1 KLFIGGLSFEKTDEGLRSHFEQWGTLTNSVVMRDPNTKRSGGFGFVTYATVEEVDAAMNE 60
Query: 161 GTHLVKGKKVDVKKALSKEEMAKLKT 186
H V + ++ K+A+S+E+ + T
Sbjct: 61 RPHKVDERVLEPKRAVSREDSERTGT 86
>UNIPROTKB|E1BK61 [details] [associations]
symbol:E1BK61 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00550000074566 EMBL:DAAA02005585 IPI:IPI00689266
Ensembl:ENSBTAT00000016960 Uniprot:E1BK61
Length = 270
Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 84/181 (46%), Positives = 117/181 (64%)
Query: 2 TKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAH 61
+K PE LRKLFI GL + T E+L SHFE G +VVM+ P TK SRGFGF+T
Sbjct: 3 SKSPEELRKLFIRGLSFETIDESLSSHFEM-GKAHRLVVMRVPNTKHSRGFGFVTKPWWR 61
Query: 62 MVDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFG 121
+ A ARPH +D +VVEPKR V R + RP A TVKK+FVG +++ E L+ F
Sbjct: 62 SLA-AMNARPHKVDERVVEPKRDVSRGDSQRPHAHLTVKKIFVGGIQEGTEEHHLRNNFE 120
Query: 122 QFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEM 181
Q+G++ + ++T++ + KKRGF F ++D+D VDK ++ H V G +V++ALSK+EM
Sbjct: 121 QYGKI-DIEIMTDRGSDKKRGFAFETFDDHDSVDKIVIQKYHTVNGHNCEVREALSKQEM 179
Query: 182 A 182
A
Sbjct: 180 A 180
>FB|FBgn0011666 [details] [associations]
symbol:msi "musashi" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=IDA] [GO:0022416 "chaeta
development" evidence=IMP] [GO:0003723 "RNA binding" evidence=ISM]
[GO:0003729 "mRNA binding" evidence=ISS;NAS;TAS] [GO:0006397 "mRNA
processing" evidence=ISS] [GO:0017148 "negative regulation of
translation" evidence=IMP;TAS] [GO:0006417 "regulation of
translation" evidence=TAS] [GO:0045182 "translation regulator
activity" evidence=TAS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001709 "cell fate determination" evidence=TAS]
[GO:0000900 "translation repressor activity, nucleic acid binding"
evidence=TAS] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0042078 "germ-line stem cell division" evidence=IMP]
[GO:0071456 "cellular response to hypoxia" evidence=IMP]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 EMBL:AE014297 GO:GO:0005634 GO:GO:0000166
GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0071456 GO:GO:0022416
GO:GO:0001709 GO:GO:0019827 GO:GO:0000900 GO:GO:0042078 KO:K14411
GeneTree:ENSGT00700000104255 HSSP:Q61474 ChiTaRS:msi
FlyBase:FBgn0011666 EMBL:BT133366 RefSeq:NP_001247303.1
RefSeq:NP_733108.2 UniGene:Dm.1334 SMR:Q8IMS8 MINT:MINT-296706
STRING:Q8IMS8 EnsemblMetazoa:FBtr0084881 EnsemblMetazoa:FBtr0305218
EnsemblMetazoa:FBtr0333664 GeneID:43087 KEGG:dme:Dmel_CG5099
UCSC:CG5099-RB CTD:43087 InParanoid:Q8IMS8 OMA:PIKAFAC
GenomeRNAi:43087 NextBio:832139 Uniprot:Q8IMS8
Length = 634
Score = 400 (145.9 bits), Expect = 8.3e-37, P = 8.3e-37
Identities = 76/170 (44%), Positives = 108/170 (63%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
KLF+GGL ++TSS+ LK +F +G V DV++MKDP T++SRGFGFIT+ V+
Sbjct: 204 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 263
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
HT+D K ++PK A P+ NRP KK+FVG + D + E++K YF QFG V
Sbjct: 264 PIHTLDGKKIDPKHATPK---NRPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEET 320
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKE 179
++ +++T + RGFGFV + + D VD+ C H +K KKV+ KKA KE
Sbjct: 321 VMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 370
Score = 194 (73.4 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 38/105 (36%), Positives = 65/105 (61%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
++ +K+F+GG+ TS+E +K++F +G V + V++ D QTK+ RGFGF+T+ + +
Sbjct: 285 RQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDV 344
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSL 107
VD HTI +K VE K+A P+ + P A K++ +G+L
Sbjct: 345 VDRVCEIHFHTIKNKKVECKKAQPKEAVT-PAAQLLQKRIMLGTL 388
>UNIPROTKB|F1MH29 [details] [associations]
symbol:F1MH29 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 GeneTree:ENSGT00550000074566 EMBL:DAAA02006340
IPI:IPI00839326 Ensembl:ENSBTAT00000046159 Uniprot:F1MH29
Length = 241
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 78/165 (47%), Positives = 106/165 (64%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEP LRKLFIGGL + T+ E+L+SH V M DP TK SRGF F+TY++
Sbjct: 7 KEPGQLRKLFIGGLSFETTDESLRSHCSHSPSCV----MTDPNTKCSRGFRFVTYATVEE 62
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARPH +D +VVEPKR V R RP A TVKK+F G +++D E L++YF +
Sbjct: 63 VDAAMNARPHKVDRRVVEPKRGVSREGSQRPGAHLTVKKIFAGGIKEDTEERHLRDYFEK 122
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKG 167
G++ + ++T+ +GKKRGF FV ++D+D VDK ++ H V G
Sbjct: 123 PGKIEVIEIMTDPSSGKKRGFAFVTFDDHDSVDKTVIQKYHTVNG 167
>FB|FBgn0260943 [details] [associations]
symbol:Rbp6 "RNA-binding protein 6" species:7227 "Drosophila
melanogaster" [GO:0003729 "mRNA binding" evidence=NAS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737
EMBL:AE014296 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0005844 eggNOG:COG0724 KO:K14411 GeneTree:ENSGT00700000104255
GO:GO:0048864 OMA:ENYISAA EMBL:AY122226 EMBL:S51715 PIR:F48110
RefSeq:NP_001097631.1 RefSeq:NP_001097632.1 RefSeq:NP_730245.2
UniGene:Dm.22292 HSSP:Q61474 ProteinModelPortal:Q9VVE5 SMR:Q9VVE5
DIP:DIP-19056N IntAct:Q9VVE5 MINT:MINT-918255
EnsemblMetazoa:FBtr0075285 GeneID:39919 KEGG:dme:Dmel_CG32169
UCSC:CG32169-RA CTD:39919 FlyBase:FBgn0260943 InParanoid:Q9VVE5
OrthoDB:EOG4MSBF6 GenomeRNAi:39919 NextBio:816085 Bgee:Q9VVE5
Uniprot:Q9VVE5
Length = 369
Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
Identities = 83/186 (44%), Positives = 111/186 (59%)
Query: 5 PEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVD 64
P K+FIGGL ++TS E+L+ +F +GD+ + +VMKDP T++SRGFGF+T+S + VD
Sbjct: 25 PNDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVD 84
Query: 65 DAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFG 124
H +D K V+PK A PR P+ KK+FVG L T ED+K YF QFG
Sbjct: 85 KVLTQGTHELDGKKVDPKVAFPRRA--HPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFG 142
Query: 125 EVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEM--A 182
+ L+ +K+T + RGFGFV + D VDK C H + K V+ KKA KE M A
Sbjct: 143 PIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKEVMLPA 202
Query: 183 KL-KTR 187
L KTR
Sbjct: 203 NLAKTR 208
>ZFIN|ZDB-GENE-040426-1268 [details] [associations]
symbol:msi2b "musashi homolog 2b (Drosophila)"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 ZFIN:ZDB-GENE-040426-1268 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724
HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
GeneTree:ENSGT00700000104255 HSSP:Q61474 EMBL:BX000438
EMBL:BX510988 EMBL:BX649247 EMBL:CR848815 EMBL:BC055251
IPI:IPI00481779 RefSeq:NP_957403.1 UniGene:Dr.82489 SMR:Q7SXT6
STRING:Q7SXT6 Ensembl:ENSDART00000100194 GeneID:394084
KEGG:dre:394084 CTD:394084 InParanoid:Q7SXT6 OMA:NYISASP
NextBio:20815041 Uniprot:Q7SXT6
Length = 408
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 77/178 (43%), Positives = 112/178 (62%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+FIGGL ++TS ++L+ +F +G++ + +VM+DP TK+SRGFGF+T++ A VD A
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADAASVDKVLAQ 81
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
H +DSK ++PK A PR +P+ KK+FVG L + ED+K+YF QFG+V
Sbjct: 82 PHHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDA 139
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMAKLKTR 187
L+ +K T + RGFGFV + + D V+K C H + K V+ KKA KE M TR
Sbjct: 140 MLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTR 197
Score = 163 (62.4 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 33/85 (38%), Positives = 53/85 (62%)
Query: 9 RKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQA 68
+K+F+GGL T E +K +FE +G V D ++M D T + RGFGF+T+ + +V+
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query: 69 ARPHTIDSKVVEPKRAVPRTEINRP 93
H I++K+VE K+A P+ E+ P
Sbjct: 170 IHFHEINNKMVECKKAQPK-EVMFP 193
>UNIPROTKB|F1LXW0 [details] [associations]
symbol:F1LXW0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 IPI:IPI00212167 Ensembl:ENSRNOT00000008039
Uniprot:F1LXW0
Length = 293
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 81/185 (43%), Positives = 113/185 (61%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE L KLF G L + T+ E+L+SHFE W VM+DP TK+SRGFGF+TY++
Sbjct: 8 KEPEQLWKLFTGALSFETTDESLRSHFEQW--TTHCGVMRDPNTKRSRGFGFVTYATVEE 65
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD ARPH +D +VVEPKRAV R + RP A VK +FVG +++D E L++Y Q
Sbjct: 66 VDAVMNARPHKVDGRVVEPKRAVSREDSQRPGAHLAVK-IFVGGIKEDTEEHHLRDYSEQ 124
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
G+ +++ KKRGF V ++ +D VDK ++ H G +V+KAL K+EM
Sbjct: 125 NGK-------KQRQWKKKRGFALVTFDAHDSVDKIVIQKYH-TNGHSCEVRKALWKQEMT 176
Query: 183 KLKTR 187
++
Sbjct: 177 SASSK 181
Score = 134 (52.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 30/88 (34%), Positives = 49/88 (55%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ + KLF G+L + T+E L+ +F Q+ T ++ + T + RGFGFV Y +
Sbjct: 7 PKEPEQLWKLFTGALSFETTDESLRSHFEQW--TTHCGVMRDPNTKRSRGFGFVTYATVE 64
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEE 180
VD H V G+ V+ K+A+S+E+
Sbjct: 65 EVDAVMNARPHKVDGRVVEPKRAVSRED 92
>UNIPROTKB|J9P972 [details] [associations]
symbol:DAZAP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104255 EMBL:AAEX03012650 EMBL:AAEX03012651
Ensembl:ENSCAFT00000049246 Uniprot:J9P972
Length = 258
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 73/176 (41%), Positives = 115/176 (65%)
Query: 8 LRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQ 67
LRKLF+GGLD+ T+ ETL+S+F +G+VVD V+MKD T +SRGFGF+ + + V
Sbjct: 54 LRKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 113
Query: 68 AARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVT 127
A+RPHT+D + ++PK+ PR++ ++ K+FVG + + E +L+EYF +FG VT
Sbjct: 114 ASRPHTLDGRNIDPKQKGPRSDNSKSN------KIFVGGIPHNCGETELREYFKKFGVVT 167
Query: 128 SVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMAK 183
V ++ + E + RGFGF+ + D VD+A H + GKKV+VK+A ++ ++
Sbjct: 168 EVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQ 223
Score = 165 (63.1 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 33/92 (35%), Positives = 52/92 (56%)
Query: 92 RPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDY 151
R A A ++KLFVG L T+E L+ YF Q+GEV ++ +K T + RGFGFV++ D
Sbjct: 47 RKAAQAALRKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDP 106
Query: 152 DPVDKACLKGTHLVKGKKVDVKKALSKEEMAK 183
+ V H + G+ +D K+ + + +K
Sbjct: 107 NCVGTVLASRPHTLDGRNIDPKQKGPRSDNSK 138
>FB|FBgn0010258 [details] [associations]
symbol:Rbp4 "RNA-binding protein 4" species:7227 "Drosophila
melanogaster" [GO:0005737 "cytoplasm" evidence=IDA] [GO:0003727
"single-stranded RNA binding" evidence=IDA] [GO:0006397 "mRNA
processing" evidence=ISS] [GO:0003729 "mRNA binding"
evidence=ISS;NAS] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0000166 GO:GO:0003729
GO:GO:0003727 Gene3D:3.30.70.330 HSSP:P09651 EMBL:U18401
ProteinModelPortal:Q24024 SMR:Q24024 IntAct:Q24024 PRIDE:Q24024
FlyBase:FBgn0010258 eggNOG:NOG289504 InParanoid:Q24024
OrthoDB:EOG4CNP6S Bgee:Q24024 Uniprot:Q24024
Length = 428
Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 81/188 (43%), Positives = 115/188 (61%)
Query: 6 EHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDD 65
EHLRK+FIGGL +T+ ETL+ F +G V D VV++DP + SRGFGF+TY V+
Sbjct: 29 EHLRKIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVDPKSVEI 88
Query: 66 AQAARPHTIDSKVVEPKRAVPRTEINRP------------EAG-ATVKKLFVGSLRDDIT 112
Q ARPHTID+K+VE K A+PR + R EAG K++F+G L++
Sbjct: 89 VQRARPHTIDNKIVETKHALPRQDFKRGGGVGSVVGSFGCEAGFMNSKRIFLGGLKEYHD 148
Query: 113 EEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDV 172
E ++EYF QFG V SV L+ ++ETG++R FGF+E+ D +KA H + V+V
Sbjct: 149 ENIVREYFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKALAPRKHWILQTLVEV 208
Query: 173 KKALSKEE 180
K++ K +
Sbjct: 209 KRSTQKAD 216
Score = 131 (51.2 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 30/97 (30%), Positives = 49/97 (50%)
Query: 87 RTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFV 146
+T I + E ++K+F+G L T E L+ +F QFG V ++ + + RGFGFV
Sbjct: 20 KTAI-KEEGYEHLRKIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFV 78
Query: 147 EYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMAK 183
Y D V+ H + K V+ K AL +++ +
Sbjct: 79 TYVDPKSVEIVQRARPHTIDNKIVETKHALPRQDFKR 115
>UNIPROTKB|F1P645 [details] [associations]
symbol:LOC607505 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
InterPro:IPR021662 Pfam:PF11627 GeneTree:ENSGT00550000074566
EMBL:AAEX03007023 Ensembl:ENSCAFT00000000618 OMA:EMARASP
Uniprot:F1P645
Length = 317
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 79/182 (43%), Positives = 118/182 (64%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
+EP+ LRKLFIGGL + T+ E+L+SHFE WG + D VV ++P ++SRGFG + H+
Sbjct: 8 EEPQ-LRKLFIGGLSFETTDESLRSHFERWGPLPDRVVRREPNAERSRGFGVVP---RHL 63
Query: 63 VDDAQAARPH-TIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFG 121
+ A A P T ++ +RA R + RP A TVKK+FVG ++ D E L++ F
Sbjct: 64 EEVAAARNPGPTRWTEESWKQRAASREDSQRPGAHLTVKKIFVGGIKGDAEEHHLRDDFE 123
Query: 122 QFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEM 181
Q G+ + ++T++ +GKKRGF FV ++D+D VDK ++ H V G +V+KALSK+EM
Sbjct: 124 QDGKTEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHGCEVRKALSKQEM 183
Query: 182 AK 183
A+
Sbjct: 184 AR 185
>ZFIN|ZDB-GENE-030826-25 [details] [associations]
symbol:msi2a "musashi homolog 2a (Drosophila)"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 ZFIN:ZDB-GENE-030826-25 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724
HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
GeneTree:ENSGT00700000104255 OrthoDB:EOG48GW3J HSSP:Q61474
EMBL:CR931799 EMBL:CR931806 EMBL:BC045335 IPI:IPI00489753
RefSeq:NP_997961.1 UniGene:Dr.32677 SMR:Q7ZW10
Ensembl:ENSDART00000099473 Ensembl:ENSDART00000132096
GeneID:100002680 KEGG:dre:100002680 CTD:100002680 InParanoid:Q7ZW10
OMA:MEADASQ NextBio:20785547 Uniprot:Q7ZW10
Length = 388
Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
Identities = 77/178 (43%), Positives = 110/178 (61%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+FIGGL ++TS ++L+ +F +G++ + +VM+DP TK+SRGFGFIT++ VD A
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFCKFGEIRECMVMRDPTTKRSRGFGFITFADVSSVDKVLAQ 81
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
H +DSK ++PK A PR +P+ KK+FVG L ED+K+YF QFG+V
Sbjct: 82 PHHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSASTVVEDVKQYFEQFGKVEDA 139
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMAKLKTR 187
L+ +K T + RGFGFV + + D V+K C H + K V+ KKA KE M TR
Sbjct: 140 MLMFDKTTNRHRGFGFVTFENEDIVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTR 197
Score = 162 (62.1 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 33/85 (38%), Positives = 53/85 (62%)
Query: 9 RKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQA 68
+K+F+GGL T E +K +FE +G V D ++M D T + RGFGF+T+ + +V+
Sbjct: 110 KKIFVGGLSASTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDIVEKVCE 169
Query: 69 ARPHTIDSKVVEPKRAVPRTEINRP 93
H I++K+VE K+A P+ E+ P
Sbjct: 170 IHFHEINNKMVECKKAQPK-EVMFP 193
>ZFIN|ZDB-GENE-050320-86 [details] [associations]
symbol:msi1 "musashi homolog 1 (Drosophila)"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0007417 "central
nervous system development" evidence=IMP] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-050320-86 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0007417 GO:GO:0003676 EMBL:AB698464 Uniprot:J4C3V8
Length = 349
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 77/173 (44%), Positives = 109/173 (63%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+FIGGL ++T+ E LK +F +G+V + +VM+DP TK+SRGFGF+T+ VD A
Sbjct: 21 KMFIGGLSWQTTQEGLKDYFCKFGEVKESMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQ 80
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
H +DSK ++PK A PR +P+ KK+FVG L + T ED+K+YF QFG+V
Sbjct: 81 TRHELDSKTIDPKVAFPRRA--QPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDDA 138
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
L+ +K T + RGFGFV + + D V+K C H + K V+ KKA KE M+
Sbjct: 139 MLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMS 191
Score = 165 (63.1 bits), Expect = 9.1e-12, P = 9.1e-12
Identities = 32/85 (37%), Positives = 54/85 (63%)
Query: 9 RKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQA 68
+K+F+GGL T+ E +K +F+ +G V D ++M D T + RGFGF+T+ + +V+
Sbjct: 109 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 168
Query: 69 ARPHTIDSKVVEPKRAVPRTEINRP 93
H I++K+VE K+A P+ E+ P
Sbjct: 169 IHFHEINNKMVECKKAQPK-EVMSP 192
Score = 158 (60.7 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 34/87 (39%), Positives = 48/87 (55%)
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLK 160
K+F+G L T+E LK+YF +FGEV ++ + T + RGFGFV + D VDK +
Sbjct: 21 KMFIGGLSWQTTQEGLKDYFCKFGEVKESMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQ 80
Query: 161 GTHLVKGKKVDVKKALSKEEMAKLKTR 187
H + K +D K A + KL TR
Sbjct: 81 TRHELDSKTIDPKVAFPRRAQPKLVTR 107
>UNIPROTKB|Q98SJ2 [details] [associations]
symbol:dazap1 "DAZ-associated protein 1" species:8355
"Xenopus laevis" [GO:0003723 "RNA binding" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0007275 GO:GO:0005737 GO:GO:0030154
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0048477 GO:GO:0003723
CTD:26528 HOVERGEN:HBG002295 KO:K14411 EMBL:AY028920
RefSeq:NP_001082088.1 UniGene:Xl.1666 ProteinModelPortal:Q98SJ2
SMR:Q98SJ2 GeneID:398218 KEGG:xla:398218 Xenbase:XB-GENE-864805
Uniprot:Q98SJ2
Length = 360
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 77/191 (40%), Positives = 116/191 (60%)
Query: 6 EHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDD 65
+ + KLF+GGLD+ T+ ETL+S+F +G+VVD V+MKD T +SRGFGF+ + + V
Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66
Query: 66 AQAARPHTIDSKVVEPKRAVPR---TEINRPEAGATVK----------KLFVGSLRDDIT 112
A+RPHT+D + ++PK PR E +RP G K K+FVG + +
Sbjct: 67 VLASRPHTLDGRNIDPKPCTPRGMQPERSRPREGWQQKEPRTENSRSNKIFVGGIPHNCG 126
Query: 113 EEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDV 172
E +LKEYF +FG VT V ++ + E + RGFGF+ + D VD+A H + GKKV+V
Sbjct: 127 ETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEV 186
Query: 173 KKALSKEEMAK 183
K+A ++ ++
Sbjct: 187 KRAEPRDSKSQ 197
Score = 160 (61.4 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 37/89 (41%), Positives = 51/89 (57%)
Query: 3 KEP--EHLR--KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYS 58
KEP E+ R K+F+GG+ + LK +F +G V +VV++ D + ++ RGFGFIT+
Sbjct: 104 KEPRTENSRSNKIFVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFE 163
Query: 59 SAHMVDDAQAARPHTIDSKVVEPKRAVPR 87
VD A H I K VE KRA PR
Sbjct: 164 DEQSVDQAVNMHFHDIMGKKVEVKRAEPR 192
Score = 156 (60.0 bits), Expect = 9.6e-11, P = 9.6e-11
Identities = 30/80 (37%), Positives = 45/80 (56%)
Query: 94 EAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDP 153
+ G + KLFVG L T+E L+ YF Q+GEV ++ +K T + RGFGFV++ D +
Sbjct: 4 QGGDEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNC 63
Query: 154 VDKACLKGTHLVKGKKVDVK 173
V H + G+ +D K
Sbjct: 64 VGTVLASRPHTLDGRNIDPK 83
>UNIPROTKB|Q96DH6 [details] [associations]
symbol:MSI2 "RNA-binding protein Musashi homolog 2"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005844 "polysome" evidence=IEA] [GO:0008266
"poly(U) RNA binding" evidence=IEA] [GO:0048864 "stem cell
development" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 eggNOG:COG0724 HOGENOM:HOG000234441
HOVERGEN:HBG002295 KO:K14411 OrthoDB:EOG48GW3J EMBL:BC001526
EMBL:BC017560 EMBL:AK093888 IPI:IPI00073713 IPI:IPI00167806
IPI:IPI00455161 RefSeq:NP_620412.1 RefSeq:NP_733839.1
UniGene:Hs.658922 ProteinModelPortal:Q96DH6 SMR:Q96DH6
IntAct:Q96DH6 STRING:Q96DH6 PhosphoSite:Q96DH6 DMDM:51316513
PaxDb:Q96DH6 PRIDE:Q96DH6 DNASU:124540 Ensembl:ENST00000284073
Ensembl:ENST00000322684 Ensembl:ENST00000579180 GeneID:124540
KEGG:hsa:124540 UCSC:uc002iuz.1 UCSC:uc002iva.3 CTD:124540
GeneCards:GC17P055334 HGNC:HGNC:18585 HPA:CAB022300 MIM:607897
neXtProt:NX_Q96DH6 PharmGKB:PA38590 InParanoid:Q96DH6 OMA:ISDCTIM
PhylomeDB:Q96DH6 ChiTaRS:MSI2 GenomeRNAi:124540 NextBio:81316
ArrayExpress:Q96DH6 Bgee:Q96DH6 CleanEx:HS_MSI2
Genevestigator:Q96DH6 GermOnline:ENSG00000153944 Uniprot:Q96DH6
Length = 328
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 75/178 (42%), Positives = 110/178 (61%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+FIGGL ++TS ++L+ +F +G++ + +VM+DP TK+SRGFGF+T++ VD
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
H +DSK ++PK A PR +P+ KK+FVG L + ED+K+YF QFG+V
Sbjct: 82 PHHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDA 139
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMAKLKTR 187
L+ +K T + RGFGFV + + D V+K C H + K V+ KKA KE M TR
Sbjct: 140 MLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTR 197
Score = 163 (62.4 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 33/85 (38%), Positives = 53/85 (62%)
Query: 9 RKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQA 68
+K+F+GGL T E +K +FE +G V D ++M D T + RGFGF+T+ + +V+
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query: 69 ARPHTIDSKVVEPKRAVPRTEINRP 93
H I++K+VE K+A P+ E+ P
Sbjct: 170 IHFHEINNKMVECKKAQPK-EVMFP 193
>MGI|MGI:1923876 [details] [associations]
symbol:Msi2 "musashi RNA-binding protein 2" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0003727 "single-stranded RNA binding"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005844
"polysome" evidence=IDA] [GO:0008266 "poly(U) RNA binding"
evidence=IDA] [GO:0048864 "stem cell development" evidence=IMP]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 MGI:MGI:1923876 GO:GO:0005737 GO:GO:0008266
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0005844 eggNOG:COG0724
HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
GeneTree:ENSGT00700000104255 GO:GO:0048864 CTD:124540 ChiTaRS:MSI2
EMBL:AB056102 EMBL:AB056103 EMBL:BK001483 EMBL:AK049637
EMBL:AK049688 EMBL:AK051269 IPI:IPI00120924 IPI:IPI00462899
IPI:IPI00462900 RefSeq:NP_473384.1 UniGene:Mm.400451
UniGene:Mm.428433 UniGene:Mm.474737 ProteinModelPortal:Q920Q6
SMR:Q920Q6 STRING:Q920Q6 PhosphoSite:Q920Q6 PaxDb:Q920Q6
PRIDE:Q920Q6 Ensembl:ENSMUST00000092794 Ensembl:ENSMUST00000107909
GeneID:76626 KEGG:mmu:76626 UCSC:uc007kvn.2 InParanoid:Q920Q6
OMA:ENYISAA NextBio:345476 Bgee:Q920Q6 CleanEx:MM_MSI2
Genevestigator:Q920Q6 GermOnline:ENSMUSG00000069769 Uniprot:Q920Q6
Length = 346
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 75/178 (42%), Positives = 110/178 (61%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+FIGGL ++TS ++L+ +F +G++ + +VM+DP TK+SRGFGF+T++ VD
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
H +DSK ++PK A PR +P+ KK+FVG L + ED+K+YF QFG+V
Sbjct: 82 PHHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDA 139
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMAKLKTR 187
L+ +K T + RGFGFV + + D V+K C H + K V+ KKA KE M TR
Sbjct: 140 MLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTR 197
Score = 163 (62.4 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 33/85 (38%), Positives = 53/85 (62%)
Query: 9 RKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQA 68
+K+F+GGL T E +K +FE +G V D ++M D T + RGFGF+T+ + +V+
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query: 69 ARPHTIDSKVVEPKRAVPRTEINRP 93
H I++K+VE K+A P+ E+ P
Sbjct: 170 IHFHEINNKMVECKKAQPK-EVMFP 193
>UNIPROTKB|F1LW17 [details] [associations]
symbol:F1LW17 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104376 IPI:IPI00567724
Ensembl:ENSRNOT00000046658 ArrayExpress:F1LW17 Uniprot:F1LW17
Length = 249
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 77/174 (44%), Positives = 112/174 (64%)
Query: 6 EHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDD 65
+ LRKLFIGGL + T+ ++L+ HFE WG + D K+SRGFGF+TYS VD
Sbjct: 29 KELRKLFIGGLSFETTDDSLREHFEKWGTLTDC------GNKRSRGFGFLTYSCVEEVDA 82
Query: 66 AQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGE 125
A ARPH +VV KRAV R + +P A VKKL+VG +++D E +L+ YF ++G+
Sbjct: 83 AVCARPHKAAVRVVG-KRAVSREDSVKPGAHLMVKKLYVGGIKEDTEEYNLRGYFKKYGK 141
Query: 126 VTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKE 179
+ ++ ++ +++GKKRGF FV ++D+D VDK L+ H + G +V K LSKE
Sbjct: 142 IETIEVMEGRQSGKKRGFAFVTFDDHDTVDKI-LQKHHAINGNNCEVGKVLSKE 194
Score = 114 (45.2 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 28/91 (30%), Positives = 48/91 (52%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P ++KLF+G L + T++ L+E+F ++G +T + RGFGF+ Y+ +
Sbjct: 25 PGTEKELRKLFIGGLSFETTDDSLREHFEKWGTLTDCG------NKRSRGFGFLTYSCVE 78
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEEMAK 183
VD A H + V K+A+S+E+ K
Sbjct: 79 EVDAAVCARPHKAAVRVVG-KRAVSREDSVK 108
>UNIPROTKB|F1N7Z3 [details] [associations]
symbol:F1N7Z3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00550000074566 IPI:IPI00696055 EMBL:DAAA02008074
Ensembl:ENSBTAT00000056782 Uniprot:F1N7Z3
Length = 268
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 78/180 (43%), Positives = 114/180 (63%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE L+KLFI GL + T+ E L+S FE WG + D VV +DP K+ G G
Sbjct: 1 KEPEQLQKLFIRGLSFETTHEGLRSRFEQWGTLTDCVVRRDPNAKRHGGGG--------- 51
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
+ +A + +D +VV+PKRAV R + RP A VKK+FVG +++D E L++YF Q
Sbjct: 52 --ERKATQ---VDGRVVKPKRAVSREDSQRPGAHLPVKKVFVGGIKEDTEEHHLRDYFEQ 106
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G+ + ++T++ +GKKRGF FV ++D+D VDK ++ H G +V+KALSK+EMA
Sbjct: 107 YGKTEVIEIITDQGSGKKRGFVFVTFDDHDSVDKIVIQKYHTGNGLNCEVRKALSKQEMA 166
>UNIPROTKB|O43347 [details] [associations]
symbol:MSI1 "RNA-binding protein Musashi homolog 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005844 "polysome" evidence=IEA] [GO:0008266
"poly(U) RNA binding" evidence=IEA] [GO:0009725 "response to
hormone stimulus" evidence=IEA] [GO:0030855 "epithelial cell
differentiation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003723 "RNA binding"
evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0005737
GO:GO:0007399 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0009725 GO:GO:0005844 GO:GO:0030855
eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
EMBL:AB012851 EMBL:AC003982 EMBL:AB072590 EMBL:AB072591
EMBL:AB072592 EMBL:AB073212 IPI:IPI00001007 RefSeq:NP_002433.1
UniGene:Hs.158311 ProteinModelPortal:O43347 SMR:O43347
IntAct:O43347 MINT:MINT-1432501 STRING:O43347 PhosphoSite:O43347
PaxDb:O43347 PRIDE:O43347 DNASU:4440 Ensembl:ENST00000257552
GeneID:4440 KEGG:hsa:4440 UCSC:uc001tye.1 CTD:4440
GeneCards:GC12M120779 HGNC:HGNC:7330 HPA:CAB022337 MIM:603328
neXtProt:NX_O43347 PharmGKB:PA31137 InParanoid:O43347 OMA:GLPGSHP
OrthoDB:EOG48GW3J GenomeRNAi:4440 NextBio:17313 ArrayExpress:O43347
Bgee:O43347 CleanEx:HS_MSI1 Genevestigator:O43347
GermOnline:ENSG00000135097 Uniprot:O43347
Length = 362
Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 76/173 (43%), Positives = 108/173 (62%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+FIGGL ++T+ E L+ +F +G+V + +VM+DP TK+SRGFGF+T+ VD A
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
H +DSK ++PK A PR +P+ KK+FVG L + T ED+K+YF QFG+V
Sbjct: 81 SRHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDA 138
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
L+ +K T + RGFGFV + D V+K C H + K V+ KKA KE M+
Sbjct: 139 MLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMS 191
Score = 176 (67.0 bits), Expect = 6.1e-13, P = 6.1e-13
Identities = 37/102 (36%), Positives = 55/102 (53%)
Query: 86 PRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGF 145
P+ + P++ K+F+G L T+E L+EYFGQFGEV ++ + T + RGFGF
Sbjct: 6 PQPGLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGF 65
Query: 146 VEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMAKLKTR 187
V + D VDK + H + K +D K A + K+ TR
Sbjct: 66 VTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTR 107
Score = 174 (66.3 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 35/89 (39%), Positives = 55/89 (61%)
Query: 9 RKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQA 68
+K+F+GGL T+ E +K +FE +G V D ++M D T + RGFGF+T+ S +V+
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Query: 69 ARPHTIDSKVVEPKRAVPRTEINRPEAGA 97
H I++K+VE K+A P+ E+ P A
Sbjct: 169 IHFHEINNKMVECKKAQPK-EVMSPTGSA 196
>UNIPROTKB|F1MS42 [details] [associations]
symbol:MSI1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008266 "poly(U) RNA binding" evidence=IEA] [GO:0005844
"polysome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0005737 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0005844 GeneTree:ENSGT00700000104255 OMA:GLPGSHP
EMBL:DAAA02045450 EMBL:DAAA02045451 IPI:IPI00718423
Ensembl:ENSBTAT00000012926 Uniprot:F1MS42
Length = 342
Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 76/173 (43%), Positives = 108/173 (62%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+FIGGL ++T+ E L+ +F +G+V + +VM+DP TK+SRGFGF+T+ VD A
Sbjct: 1 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 60
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
H +DSK ++PK A PR +P+ KK+FVG L + T ED+K+YF QFG+V
Sbjct: 61 SRHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDA 118
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
L+ +K T + RGFGFV + D V+K C H + K V+ KKA KE M+
Sbjct: 119 MLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMS 171
Score = 174 (66.3 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 35/89 (39%), Positives = 55/89 (61%)
Query: 9 RKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQA 68
+K+F+GGL T+ E +K +FE +G V D ++M D T + RGFGF+T+ S +V+
Sbjct: 89 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 148
Query: 69 ARPHTIDSKVVEPKRAVPRTEINRPEAGA 97
H I++K+VE K+A P+ E+ P A
Sbjct: 149 IHFHEINNKMVECKKAQPK-EVMSPTGSA 176
Score = 172 (65.6 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 35/87 (40%), Positives = 49/87 (56%)
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLK 160
K+F+G L T+E L+EYFGQFGEV ++ + T + RGFGFV + D VDK +
Sbjct: 1 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 60
Query: 161 GTHLVKGKKVDVKKALSKEEMAKLKTR 187
H + K +D K A + K+ TR
Sbjct: 61 SRHELDSKTIDPKVAFPRRAQPKMVTR 87
>UNIPROTKB|F1LUE7 [details] [associations]
symbol:F1LUE7 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00566822
Ensembl:ENSRNOT00000052211 ArrayExpress:F1LUE7 Uniprot:F1LUE7
Length = 256
Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 77/172 (44%), Positives = 111/172 (64%)
Query: 8 LRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQ 67
LRKLFIGGL + T+ ++L+ HFE WG + D K+SRGFGF+TYS VD A
Sbjct: 1 LRKLFIGGLSFETTDDSLREHFEKWGTLTDC------GNKRSRGFGFLTYSCVEEVDAAV 54
Query: 68 AARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVT 127
ARPH +VV KRAV R + +P A VKKL+VG +++D E +L+ YF ++G++
Sbjct: 55 CARPHKAAVRVVG-KRAVSREDSVKPGAHLMVKKLYVGGIKEDTEEYNLRGYFKKYGKIE 113
Query: 128 SVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKE 179
++ ++ +++GKKRGF FV ++D+D VDK L+ H + G +V K LSKE
Sbjct: 114 TIEVMEGRQSGKKRGFAFVTFDDHDTVDKI-LQKHHAINGNNCEVGKVLSKE 164
>MGI|MGI:107376 [details] [associations]
symbol:Msi1 "musashi RNA-binding protein 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0003727 "single-stranded RNA binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005844 "polysome" evidence=IDA]
[GO:0008266 "poly(U) RNA binding" evidence=IDA] [GO:0009725
"response to hormone stimulus" evidence=ISO] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
MGI:MGI:107376 GO:GO:0005634 GO:GO:0005737 GO:GO:0008266
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0009725 GO:GO:0005844
GO:GO:0030855 eggNOG:COG0724 HOVERGEN:HBG002295 KO:K14411
GeneTree:ENSGT00700000104255 CTD:4440 OMA:GLPGSHP OrthoDB:EOG48GW3J
EMBL:D49654 EMBL:AK084019 IPI:IPI00121300 IPI:IPI00462260
RefSeq:NP_032655.1 UniGene:Mm.5077 PDB:1UAW PDB:2MSS PDB:2MST
PDB:2RS2 PDBsum:1UAW PDBsum:2MSS PDBsum:2MST PDBsum:2RS2
ProteinModelPortal:Q61474 SMR:Q61474 STRING:Q61474
PhosphoSite:Q61474 PaxDb:Q61474 PRIDE:Q61474 DNASU:17690
Ensembl:ENSMUST00000150779 GeneID:17690 KEGG:mmu:17690
UCSC:uc008zdu.1 UCSC:uc008zdv.1 InParanoid:Q61474 ChiTaRS:MSI1
EvolutionaryTrace:Q61474 NextBio:292270 Bgee:Q61474 CleanEx:MM_MSI1
Genevestigator:Q61474 GermOnline:ENSMUSG00000054256 Uniprot:Q61474
Length = 362
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 76/173 (43%), Positives = 107/173 (61%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+FIGGL ++T+ E L+ +F +G+V + +VM+DP TK+SRGFGF+T+ VD A
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
H +DSK ++PK A PR +P+ KK+FVG L + T ED+K YF QFG+V
Sbjct: 81 SRHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDA 138
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
L+ +K T + RGFGFV + D V+K C H + K V+ KKA KE M+
Sbjct: 139 MLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMS 191
Score = 176 (67.0 bits), Expect = 6.1e-13, P = 6.1e-13
Identities = 37/102 (36%), Positives = 55/102 (53%)
Query: 86 PRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGF 145
P+ + P++ K+F+G L T+E L+EYFGQFGEV ++ + T + RGFGF
Sbjct: 6 PQPGLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGF 65
Query: 146 VEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMAKLKTR 187
V + D VDK + H + K +D K A + K+ TR
Sbjct: 66 VTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTR 107
Score = 173 (66.0 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 35/89 (39%), Positives = 55/89 (61%)
Query: 9 RKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQA 68
+K+F+GGL T+ E +K +FE +G V D ++M D T + RGFGF+T+ S +V+
Sbjct: 109 KKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Query: 69 ARPHTIDSKVVEPKRAVPRTEINRPEAGA 97
H I++K+VE K+A P+ E+ P A
Sbjct: 169 IHFHEINNKMVECKKAQPK-EVMSPTGSA 196
>RGD|628778 [details] [associations]
symbol:Msi1 "musashi RNA-binding protein 1" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=NAS] [GO:0003727 "single-stranded RNA binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0005844 "polysome"
evidence=IEA;ISO] [GO:0008266 "poly(U) RNA binding"
evidence=IEA;ISO] [GO:0009725 "response to hormone stimulus"
evidence=IMP] [GO:0030855 "epithelial cell differentiation"
evidence=IEP] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 RGD:628778 GO:GO:0005634
GO:GO:0005737 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0009725 GO:GO:0005844 GO:GO:0030855
eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
CTD:4440 OrthoDB:EOG48GW3J EMBL:AY043393 IPI:IPI00202463
RefSeq:NP_683688.1 UniGene:Rn.162146 ProteinModelPortal:Q8K3P4
SMR:Q8K3P4 STRING:Q8K3P4 PhosphoSite:Q8K3P4 GeneID:259272
KEGG:rno:259272 NextBio:624325 ArrayExpress:Q8K3P4
Genevestigator:Q8K3P4 Uniprot:Q8K3P4
Length = 362
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 76/173 (43%), Positives = 107/173 (61%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+FIGGL ++T+ E L+ +F +G+V + +VM+DP TK+SRGFGF+T+ VD A
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
H +DSK ++PK A PR +P+ KK+FVG L + T ED+K YF QFG+V
Sbjct: 81 SRHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDA 138
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
L+ +K T + RGFGFV + D V+K C H + K V+ KKA KE M+
Sbjct: 139 MLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMS 191
Score = 176 (67.0 bits), Expect = 6.1e-13, P = 6.1e-13
Identities = 37/102 (36%), Positives = 55/102 (53%)
Query: 86 PRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGF 145
P+ + P++ K+F+G L T+E L+EYFGQFGEV ++ + T + RGFGF
Sbjct: 6 PQPGLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGF 65
Query: 146 VEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMAKLKTR 187
V + D VDK + H + K +D K A + K+ TR
Sbjct: 66 VTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTR 107
Score = 173 (66.0 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 35/89 (39%), Positives = 55/89 (61%)
Query: 9 RKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQA 68
+K+F+GGL T+ E +K +FE +G V D ++M D T + RGFGF+T+ S +V+
Sbjct: 109 KKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Query: 69 ARPHTIDSKVVEPKRAVPRTEINRPEAGA 97
H I++K+VE K+A P+ E+ P A
Sbjct: 169 IHFHEINNKMVECKKAQPK-EVMSPTGSA 196
>UNIPROTKB|Q8K3P4 [details] [associations]
symbol:Msi1 "RNA-binding protein Musashi homolog 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 RGD:628778 GO:GO:0005634
GO:GO:0005737 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0009725 GO:GO:0005844 GO:GO:0030855
eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
CTD:4440 OrthoDB:EOG48GW3J EMBL:AY043393 IPI:IPI00202463
RefSeq:NP_683688.1 UniGene:Rn.162146 ProteinModelPortal:Q8K3P4
SMR:Q8K3P4 STRING:Q8K3P4 PhosphoSite:Q8K3P4 GeneID:259272
KEGG:rno:259272 NextBio:624325 ArrayExpress:Q8K3P4
Genevestigator:Q8K3P4 Uniprot:Q8K3P4
Length = 362
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 76/173 (43%), Positives = 107/173 (61%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+FIGGL ++T+ E L+ +F +G+V + +VM+DP TK+SRGFGF+T+ VD A
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
H +DSK ++PK A PR +P+ KK+FVG L + T ED+K YF QFG+V
Sbjct: 81 SRHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDA 138
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
L+ +K T + RGFGFV + D V+K C H + K V+ KKA KE M+
Sbjct: 139 MLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMS 191
Score = 176 (67.0 bits), Expect = 6.1e-13, P = 6.1e-13
Identities = 37/102 (36%), Positives = 55/102 (53%)
Query: 86 PRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGF 145
P+ + P++ K+F+G L T+E L+EYFGQFGEV ++ + T + RGFGF
Sbjct: 6 PQPGLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGF 65
Query: 146 VEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMAKLKTR 187
V + D VDK + H + K +D K A + K+ TR
Sbjct: 66 VTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTR 107
Score = 173 (66.0 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 35/89 (39%), Positives = 55/89 (61%)
Query: 9 RKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQA 68
+K+F+GGL T+ E +K +FE +G V D ++M D T + RGFGF+T+ S +V+
Sbjct: 109 KKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Query: 69 ARPHTIDSKVVEPKRAVPRTEINRPEAGA 97
H I++K+VE K+A P+ E+ P A
Sbjct: 169 IHFHEINNKMVECKKAQPK-EVMSPTGSA 196
>RGD|1305280 [details] [associations]
symbol:Dazap1 "DAZ associated protein 1" species:10116 "Rattus
norvegicus" [GO:0001893 "maternal placenta development"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=ISO] [GO:0008283 "cell proliferation" evidence=ISO]
[GO:0035613 "RNA stem-loop binding" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0005844 "polysome" evidence=ISO]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 RGD:1305280 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:CH474029 eggNOG:COG0724
CTD:26528 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
OrthoDB:EOG40ZQXT OMA:GGYDMYN IPI:IPI00365961 EMBL:BC098930
RefSeq:NP_001020913.1 UniGene:Rn.16769 SMR:Q4KLZ3 GeneID:362836
KEGG:rno:362836 UCSC:RGD:1305280 InParanoid:Q4KLZ3 NextBio:681451
Genevestigator:Q4KLZ3 Uniprot:Q4KLZ3
Length = 405
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 75/181 (41%), Positives = 112/181 (61%)
Query: 6 EHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDD 65
+ + KLF+GGLD+ T+ ETL+S+F +G+VVD V+MKD T +SRGFGF+ + + V
Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66
Query: 66 AQAARPHTIDSKVVEPKRAVPR---TEINRPEAG--------ATVKKLFVGSLRDDITEE 114
A+RPHT+D + ++PK PR E RP+ G + K+FVG + + E
Sbjct: 67 VLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWKGPRSDSSKSNKIFVGGIPHNCGET 126
Query: 115 DLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKK 174
+L+EYF +FG VT V ++ + E + RGFGF+ + D VD+A H + GKKV+VK+
Sbjct: 127 ELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKR 186
Query: 175 A 175
A
Sbjct: 187 A 187
Score = 158 (60.7 bits), Expect = 7.6e-11, P = 7.6e-11
Identities = 35/91 (38%), Positives = 53/91 (58%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+F+GG+ + L+ +F+ +G V +VV++ D + ++ RGFGFIT+ VD A
Sbjct: 113 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 172
Query: 70 RPHTIDSKVVEPKRAVPRTEINR-P-EAGAT 98
H I K VE KRA PR N+ P + GA+
Sbjct: 173 HFHDIMGKKVEVKRAEPRDSKNQAPGQPGAS 203
>UNIPROTKB|E2R6E4 [details] [associations]
symbol:DAZAP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 CTD:26528 KO:K14411 OMA:HNLDGRN
GeneTree:ENSGT00700000104255 EMBL:AAEX03012650 EMBL:AAEX03012651
RefSeq:XP_003432858.1 Ensembl:ENSCAFT00000031038 GeneID:100683271
KEGG:cfa:100683271 Uniprot:E2R6E4
Length = 407
Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
Identities = 75/190 (39%), Positives = 116/190 (61%)
Query: 6 EHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDD 65
+ + KLF+GGLD+ T+ ETL+S+F +G+VVD V+MKD T +SRGFGF+ + + V
Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66
Query: 66 AQAARPHTIDSKVVEPKRAVPR---TEINRPEAG---------ATVKKLFVGSLRDDITE 113
A+RPHT+D + ++PK PR E RP+ G + K+FVG + + E
Sbjct: 67 VLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGE 126
Query: 114 EDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVK 173
+L+EYF +FG VT V ++ + E + RGFGF+ + D VD+A H + GKKV+VK
Sbjct: 127 TELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVK 186
Query: 174 KALSKEEMAK 183
+A ++ ++
Sbjct: 187 RAEPRDSKSQ 196
>UNIPROTKB|Q96EP5 [details] [associations]
symbol:DAZAP1 "DAZ-associated protein 1" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0007275 GO:GO:0005634 GO:GO:0005737
GO:GO:0030154 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0007283
GO:GO:0003723 eggNOG:COG0724 EMBL:AF181719 EMBL:BC012062
EMBL:AK056850 IPI:IPI00165230 IPI:IPI00335930 RefSeq:NP_061832.2
RefSeq:NP_733829.1 UniGene:Hs.222510 PDB:2DGS PDB:2DH8 PDBsum:2DGS
PDBsum:2DH8 ProteinModelPortal:Q96EP5 SMR:Q96EP5 IntAct:Q96EP5
STRING:Q96EP5 PhosphoSite:Q96EP5 DMDM:44887869
REPRODUCTION-2DPAGE:IPI00165230 PaxDb:Q96EP5 PRIDE:Q96EP5
DNASU:26528 Ensembl:ENST00000233078 Ensembl:ENST00000336761
GeneID:26528 KEGG:hsa:26528 UCSC:uc002lsm.3 UCSC:uc002lsn.3
CTD:26528 GeneCards:GC19P001407 HGNC:HGNC:2683 HPA:HPA004201
HPA:HPA004631 MIM:607430 neXtProt:NX_Q96EP5 PharmGKB:PA27153
HOGENOM:HOG000234441 HOVERGEN:HBG002295 InParanoid:Q96EP5 KO:K14411
OMA:HNLDGRN OrthoDB:EOG40ZQXT PhylomeDB:Q96EP5 ChiTaRS:DAZAP1
EvolutionaryTrace:Q96EP5 GenomeRNAi:26528 NextBio:48864
ArrayExpress:Q96EP5 Bgee:Q96EP5 CleanEx:HS_DAZAP1
Genevestigator:Q96EP5 GermOnline:ENSG00000071626 Uniprot:Q96EP5
Length = 407
Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
Identities = 75/190 (39%), Positives = 116/190 (61%)
Query: 6 EHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDD 65
+ + KLF+GGLD+ T+ ETL+S+F +G+VVD V+MKD T +SRGFGF+ + + V
Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66
Query: 66 AQAARPHTIDSKVVEPKRAVPR---TEINRPEAG---------ATVKKLFVGSLRDDITE 113
A+RPHT+D + ++PK PR E RP+ G + K+FVG + + E
Sbjct: 67 VLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGE 126
Query: 114 EDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVK 173
+L+EYF +FG VT V ++ + E + RGFGF+ + D VD+A H + GKKV+VK
Sbjct: 127 TELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVK 186
Query: 174 KALSKEEMAK 183
+A ++ ++
Sbjct: 187 RAEPRDSKSQ 196
>UNIPROTKB|I3LB68 [details] [associations]
symbol:DAZAP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 CTD:26528 KO:K14411 OMA:HNLDGRN
GeneTree:ENSGT00700000104255 EMBL:FP325262 RefSeq:NP_001231435.1
UniGene:Ssc.1299 Ensembl:ENSSSCT00000023438 GeneID:100625005
KEGG:ssc:100625005 Uniprot:I3LB68
Length = 406
Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
Identities = 75/190 (39%), Positives = 116/190 (61%)
Query: 6 EHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDD 65
+ + KLF+GGLD+ T+ ETL+S+F +G+VVD V+MKD T +SRGFGF+ + + V
Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66
Query: 66 AQAARPHTIDSKVVEPKRAVPR---TEINRPEAG---------ATVKKLFVGSLRDDITE 113
A+RPHT+D + ++PK PR E RP+ G + K+FVG + + E
Sbjct: 67 VLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGE 126
Query: 114 EDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVK 173
+L+EYF +FG VT V ++ + E + RGFGF+ + D VD+A H + GKKV+VK
Sbjct: 127 TELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVK 186
Query: 174 KALSKEEMAK 183
+A ++ ++
Sbjct: 187 RAEPRDSKSQ 196
>UNIPROTKB|B4DHE8 [details] [associations]
symbol:MSI2 "RNA-binding protein Musashi homolog 2"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
HOGENOM:HOG000234441 HOVERGEN:HBG002295 UniGene:Hs.658922
HGNC:HGNC:18585 ChiTaRS:MSI2 EMBL:AC005325 EMBL:AC007431
EMBL:AC015883 EMBL:AC091181 EMBL:AK295060 IPI:IPI00910884
SMR:B4DHE8 STRING:B4DHE8 Ensembl:ENST00000416426 UCSC:uc010wnm.1
Uniprot:B4DHE8
Length = 324
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 74/177 (41%), Positives = 109/177 (61%)
Query: 11 LFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAAR 70
+FIGGL ++TS ++L+ +F +G++ + +VM+DP TK+SRGFGF+T++ VD
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 60
Query: 71 PHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVA 130
H +DSK ++PK A PR +P+ KK+FVG L + ED+K+YF QFG+V
Sbjct: 61 HHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAM 118
Query: 131 LVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMAKLKTR 187
L+ +K T + RGFGFV + + D V+K C H + K V+ KKA KE M TR
Sbjct: 119 LMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTR 175
Score = 163 (62.4 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 33/85 (38%), Positives = 53/85 (62%)
Query: 9 RKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQA 68
+K+F+GGL T E +K +FE +G V D ++M D T + RGFGF+T+ + +V+
Sbjct: 88 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 147
Query: 69 ARPHTIDSKVVEPKRAVPRTEINRP 93
H I++K+VE K+A P+ E+ P
Sbjct: 148 IHFHEINNKMVECKKAQPK-EVMFP 171
>MGI|MGI:1917498 [details] [associations]
symbol:Dazap1 "DAZ associated protein 1" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0001893 "maternal placenta development" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=ISA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005844 "polysome"
evidence=IDA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0035613 "RNA stem-loop binding"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 MGI:MGI:1917498 GO:GO:0007275
GO:GO:0005634 GO:GO:0005737 GO:GO:0030154 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0007283 GO:GO:0003723 eggNOG:COG0724
CTD:26528 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
ChiTaRS:DAZAP1 EMBL:AF225910 EMBL:BC049355 IPI:IPI00406492
IPI:IPI00406493 RefSeq:NP_001116076.1 RefSeq:NP_001116077.1
RefSeq:NP_573451.2 UniGene:Mm.148693 ProteinModelPortal:Q9JII5
SMR:Q9JII5 STRING:Q9JII5 PhosphoSite:Q9JII5
REPRODUCTION-2DPAGE:Q9JII5 PaxDb:Q9JII5 PRIDE:Q9JII5
Ensembl:ENSMUST00000092305 Ensembl:ENSMUST00000105362 GeneID:70248
KEGG:mmu:70248 UCSC:uc007gcl.2 UCSC:uc007gcm.2
GeneTree:ENSGT00700000104255 InParanoid:Q9JII5 NextBio:331250
Bgee:Q9JII5 CleanEx:MM_DAZAP1 Genevestigator:Q9JII5
GermOnline:ENSMUSG00000069565 Uniprot:Q9JII5
Length = 406
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 75/182 (41%), Positives = 112/182 (61%)
Query: 6 EHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDD 65
+ + KLF+GGLD+ T+ ETL+S+F +G+VVD V+MKD T +SRGFGF+ + + V
Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66
Query: 66 AQAARPHTIDSKVVEPKRAVPR---TEINRPEAG---------ATVKKLFVGSLRDDITE 113
A+RPHT+D + ++PK PR E RP+ G + K+FVG + + E
Sbjct: 67 VLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGE 126
Query: 114 EDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVK 173
+L+EYF +FG VT V ++ + E + RGFGF+ + D VD+A H + GKKV+VK
Sbjct: 127 TELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVK 186
Query: 174 KA 175
+A
Sbjct: 187 RA 188
Score = 158 (60.7 bits), Expect = 7.6e-11, P = 7.6e-11
Identities = 35/91 (38%), Positives = 53/91 (58%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+F+GG+ + L+ +F+ +G V +VV++ D + ++ RGFGFIT+ VD A
Sbjct: 114 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 173
Query: 70 RPHTIDSKVVEPKRAVPRTEINR-P-EAGAT 98
H I K VE KRA PR N+ P + GA+
Sbjct: 174 HFHDIMGKKVEVKRAEPRDSKNQAPGQPGAS 204
>UNIPROTKB|F2Z3S1 [details] [associations]
symbol:Dazap1 "Protein Dazap1" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:1305280 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104255 IPI:IPI00365961
ProteinModelPortal:F2Z3S1 SMR:F2Z3S1 PRIDE:F2Z3S1
Ensembl:ENSRNOT00000046886 Uniprot:F2Z3S1
Length = 406
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 75/182 (41%), Positives = 112/182 (61%)
Query: 6 EHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDD 65
+ + KLF+GGLD+ T+ ETL+S+F +G+VVD V+MKD T +SRGFGF+ + + V
Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66
Query: 66 AQAARPHTIDSKVVEPKRAVPR---TEINRPEAG---------ATVKKLFVGSLRDDITE 113
A+RPHT+D + ++PK PR E RP+ G + K+FVG + + E
Sbjct: 67 VLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGE 126
Query: 114 EDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVK 173
+L+EYF +FG VT V ++ + E + RGFGF+ + D VD+A H + GKKV+VK
Sbjct: 127 TELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVK 186
Query: 174 KA 175
+A
Sbjct: 187 RA 188
Score = 158 (60.7 bits), Expect = 7.6e-11, P = 7.6e-11
Identities = 35/91 (38%), Positives = 53/91 (58%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+F+GG+ + L+ +F+ +G V +VV++ D + ++ RGFGFIT+ VD A
Sbjct: 114 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 173
Query: 70 RPHTIDSKVVEPKRAVPRTEINR-P-EAGAT 98
H I K VE KRA PR N+ P + GA+
Sbjct: 174 HFHDIMGKKVEVKRAEPRDSKNQAPGQPGAS 204
>UNIPROTKB|F1LZL9 [details] [associations]
symbol:F1LZL9 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 EMBL:AC109707 IPI:IPI00780768
Ensembl:ENSRNOT00000045359 Uniprot:F1LZL9
Length = 247
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 75/170 (44%), Positives = 111/170 (65%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
KLFIGGL + T+ + +SHFE G + D VV +DP TK+SRGFGF+TY++ VD A A
Sbjct: 1 KLFIGGLSFETTYKNRRSHFEQRGTLTDCVVRRDPNTKRSRGFGFVTYATVEEVDAAMNA 60
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
RPH +D++VVEP RAV R + RP G FV +++D E L+ + Q+G++ +
Sbjct: 61 RPHKVDARVVEPNRAVSREDSQRP--G------FVCGIKEDTEEHHLQNNYEQYGQIEVI 112
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKE 179
++T++ GKKR F FV ++D+D +D+ L+ H V G +V+KALSK+
Sbjct: 113 EIMTDRGLGKKRDFAFVTFHDHD-LDEIVLQKYHNVHGYNCEVRKALSKQ 161
Score = 125 (49.1 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 27/80 (33%), Positives = 44/80 (55%)
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLK 160
KLF+G L + T ++ + +F Q G +T + + T + RGFGFV Y + VD A
Sbjct: 1 KLFIGGLSFETTYKNRRSHFEQRGTLTDCVVRRDPNTKRSRGFGFVTYATVEEVDAAMNA 60
Query: 161 GTHLVKGKKVDVKKALSKEE 180
H V + V+ +A+S+E+
Sbjct: 61 RPHKVDARVVEPNRAVSRED 80
>UNIPROTKB|E1BAK6 [details] [associations]
symbol:DAZAP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 OMA:HNLDGRN GeneTree:ENSGT00700000104255
EMBL:DAAA02020260 IPI:IPI00701555 Ensembl:ENSBTAT00000026274
Uniprot:E1BAK6
Length = 396
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 75/186 (40%), Positives = 114/186 (61%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
KLF+GGLD+ T+ ETL+S+F +G+VVD V+MKD T +SRGFGF+ + + V A+
Sbjct: 1 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 60
Query: 70 RPHTIDSKVVEPKRAVPR---TEINRPEAG---------ATVKKLFVGSLRDDITEEDLK 117
RPHT+D + ++PK PR E RP+ G + K+FVG + + E +L+
Sbjct: 61 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELR 120
Query: 118 EYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALS 177
EYF +FG VT V ++ + E + RGFGF+ + D VD+A H + GKKV+VK+A
Sbjct: 121 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEP 180
Query: 178 KEEMAK 183
++ ++
Sbjct: 181 RDSKSQ 186
>UNIPROTKB|E2RF37 [details] [associations]
symbol:E2RF37 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00550000074566 EMBL:AAEX03000660
Ensembl:ENSCAFT00000003502 OMA:MAMCSAN Uniprot:E2RF37
Length = 330
Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
Identities = 68/151 (45%), Positives = 101/151 (66%)
Query: 32 WGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAARPHTIDSKVVEPKRAVPRTEIN 91
WG + D VVM+DP TK SRGF F+TY++ VD A RPH +D +VVE K+AV R +
Sbjct: 3 WGMLTDCVVMRDPNTKCSRGFEFLTYATVEDVDAAMNVRPHKVDERVVELKKAVSREDSQ 62
Query: 92 RPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDY 151
RP A TVKK+FVG +++D + L++YF +G++ + ++T++ +G KR F FV ++ +
Sbjct: 63 RPGAHLTVKKIFVGGIKEDTEQHHLRDYFEHYGKIEVIEIMTDRGSGNKRSFAFVTFDAH 122
Query: 152 DPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
D VDK ++ H V G +V+KAL K+EMA
Sbjct: 123 DSVDKIVIQKYHTVNGHNCEVRKALLKQEMA 153
Score = 118 (46.6 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 22/83 (26%), Positives = 45/83 (54%)
Query: 8 LRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQ 67
++K+F+GG+ T L+ +FE +G + + +M D + R F F+T+ + VD
Sbjct: 70 VKKIFVGGIKEDTEQHHLRDYFEHYGKIEVIEIMTDRGSGNKRSFAFVTFDAHDSVDKIV 129
Query: 68 AARPHTIDSKVVEPKRAVPRTEI 90
+ HT++ E ++A+ + E+
Sbjct: 130 IQKYHTVNGHNCEVRKALLKQEM 152
>UNIPROTKB|E2RK48 [details] [associations]
symbol:MSI1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 KO:K14411
GeneTree:ENSGT00700000104255 CTD:4440 EMBL:AAEX03014735
RefSeq:XP_854252.2 Ensembl:ENSCAFT00000016345 GeneID:611488
KEGG:cfa:611488 Uniprot:E2RK48
Length = 362
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 75/173 (43%), Positives = 107/173 (61%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+FIGGL ++T+ E L+ +F +G+V + +VM+DP TK+SRGFGF+T+ VD A
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
H +DSK ++PK A PR +P+ KK+FVG L + T ED+K+YF QF +V
Sbjct: 81 SRHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFEKVDDA 138
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
L+ +K T + RGFGFV + D V+K C H + K V+ KKA KE M+
Sbjct: 139 MLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMS 191
Score = 176 (67.0 bits), Expect = 6.1e-13, P = 6.1e-13
Identities = 37/102 (36%), Positives = 55/102 (53%)
Query: 86 PRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGF 145
P+ + P++ K+F+G L T+E L+EYFGQFGEV ++ + T + RGFGF
Sbjct: 6 PQPGLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGF 65
Query: 146 VEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMAKLKTR 187
V + D VDK + H + K +D K A + K+ TR
Sbjct: 66 VTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTR 107
Score = 166 (63.5 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 34/89 (38%), Positives = 54/89 (60%)
Query: 9 RKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQA 68
+K+F+GGL T+ E +K +FE + V D ++M D T + RGFGF+T+ S +V+
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFEKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Query: 69 ARPHTIDSKVVEPKRAVPRTEINRPEAGA 97
H I++K+VE K+A P+ E+ P A
Sbjct: 169 IHFHEINNKMVECKKAQPK-EVMSPTGSA 196
>UNIPROTKB|F1NTG9 [details] [associations]
symbol:DAZAP1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 OMA:HNLDGRN
GeneTree:ENSGT00700000104255 EMBL:AADN02058490 IPI:IPI00577519
Ensembl:ENSGALT00000024525 ArrayExpress:F1NTG9 Uniprot:F1NTG9
Length = 398
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 75/186 (40%), Positives = 113/186 (60%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
KLF+GGLD+ T+ ETL+S+F +G+VVD V+MKD T +SRGFGF+ + + V A+
Sbjct: 1 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 60
Query: 70 RPHTIDSKVVEPKRAVPR---TEINRPEAG---------ATVKKLFVGSLRDDITEEDLK 117
RPHT+D + ++PK PR E RP+ G K+FVG + + E +L+
Sbjct: 61 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGSRSDNNKSNKIFVGGIPHNCGETELR 120
Query: 118 EYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALS 177
EYF +FG VT V ++ + E + RGFGF+ + D VD+A H + GKKV+VK+A
Sbjct: 121 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEP 180
Query: 178 KEEMAK 183
++ ++
Sbjct: 181 RDSKSQ 186
>UNIPROTKB|F1M0Q5 [details] [associations]
symbol:F1M0Q5 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00559641
ProteinModelPortal:F1M0Q5 Ensembl:ENSRNOT00000036216 Uniprot:F1M0Q5
Length = 165
Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 64/138 (46%), Positives = 97/138 (70%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE L KL IGGL ++T+ E+L++HFE WG D VVM+DP TK+SR GF+TY++
Sbjct: 27 KEPEQLHKLCIGGLIFKTTHESLRNHFEKWGTFTDCVVMRDPNTKRSRSSGFVTYNTVEE 86
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARP +D ++V+PKRAV R + RP TVKK+F G +++D E ++++YF
Sbjct: 87 VDAAMNARPQKMDGRLVKPKRAVSREDSQRPGTQLTVKKIFEGGIKEDTEEHNVRDYFEH 146
Query: 123 FGEVTSVALVTEKETGKK 140
+G++ + ++T++ +GKK
Sbjct: 147 YGKIDMIEIMTDRSSGKK 164
Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 29/98 (29%), Positives = 49/98 (50%)
Query: 90 INRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYN 149
I P+ + KL +G L T E L+ +F ++G T ++ + T + R GFV YN
Sbjct: 23 IESPKEPEQLHKLCIGGLIFKTTHESLRNHFEKWGTFTDCVVMRDPNTKRSRSSGFVTYN 82
Query: 150 DYDPVDKACLKGTHLVKGKKVDVKKALSKEEMAKLKTR 187
+ VD A + G+ V K+A+S+E+ + T+
Sbjct: 83 TVEEVDAAMNARPQKMDGRLVKPKRAVSREDSQRPGTQ 120
>CGD|CAL0003460 [details] [associations]
symbol:orf19.5989 species:5476 "Candida albicans" [GO:0010494
"cytoplasmic stress granule" evidence=IEA] [GO:0005849 "mRNA
cleavage factor complex" evidence=IEA] [GO:0006379 "mRNA cleavage"
evidence=IEA] [GO:0006378 "mRNA polyadenylation" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
CGD:CAL0003460 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AACQ01000003 EMBL:AACQ01000004 eggNOG:COG0724 KO:K14411
RefSeq:XP_723052.1 RefSeq:XP_723199.1 ProteinModelPortal:Q5ANB5
SMR:Q5ANB5 STRING:Q5ANB5 GeneID:3635162 GeneID:3635323
KEGG:cal:CaO19.13410 KEGG:cal:CaO19.5989 Uniprot:Q5ANB5
Length = 475
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 71/167 (42%), Positives = 106/167 (63%)
Query: 9 RKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQA 68
RK FIGGL + T+ E L SHF+ +G++VD +MKD T +SRGFGF+T+ A VD
Sbjct: 162 RKCFIGGLSWDTTEEALVSHFQKYGNIVDYTIMKDSATGRSRGFGFLTFEDAKSVDALLK 221
Query: 69 ARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTS 128
R H +D K+++PKRA+ + + + V K+FVG + +TEE+ +F QFG++
Sbjct: 222 DR-HVLDGKLIDPKRAISKEDQEK------VGKIFVGGIDPMVTEEEFDNFFSQFGKIID 274
Query: 129 VALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKA 175
L+ +K+TG+ RGFGFV Y+ VDK C+ +KGK ++VK+A
Sbjct: 275 CQLMIDKDTGRSRGFGFVTYDSPAAVDKVCVNKYLTLKGKAMEVKRA 321
Score = 188 (71.2 bits), Expect = 5.8e-14, P = 5.8e-14
Identities = 40/108 (37%), Positives = 59/108 (54%)
Query: 78 VVEPKRAVPRTEINRPE-AGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKE 136
V P P E AG +K F+G L D TEE L +F ++G + ++ +
Sbjct: 139 VPPPPPPAPTANATSAESAGGPSRKCFIGGLSWDTTEEALVSHFQKYGNIVDYTIMKDSA 198
Query: 137 TGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMAKL 184
TG+ RGFGF+ + D VD A LK H++ GK +D K+A+SKE+ K+
Sbjct: 199 TGRSRGFGFLTFEDAKSVD-ALLKDRHVLDGKLIDPKRAISKEDQEKV 245
Score = 170 (64.9 bits), Expect = 5.2e-12, P = 5.2e-12
Identities = 36/93 (38%), Positives = 54/93 (58%)
Query: 1 ITKEP-EHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSS 59
I+KE E + K+F+GG+D + E + F +G ++D +M D T +SRGFGF+TY S
Sbjct: 237 ISKEDQEKVGKIFVGGIDPMVTEEEFDNFFSQFGKIIDCQLMIDKDTGRSRGFGFVTYDS 296
Query: 60 AHMVDDAQAARPHTIDSKVVEPKRAVPRTEINR 92
VD + T+ K +E KRA PR + N+
Sbjct: 297 PAAVDKVCVNKYLTLKGKAMEVKRAAPRGQHNQ 329
>UNIPROTKB|F8VTQ5 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AC078778 HGNC:HGNC:5031 ChiTaRS:HNRNPA1 IPI:IPI01022641
ProteinModelPortal:F8VTQ5 SMR:F8VTQ5 PRIDE:F8VTQ5
Ensembl:ENST00000551702 ArrayExpress:F8VTQ5 Bgee:F8VTQ5
Uniprot:F8VTQ5
Length = 145
Score = 241 (89.9 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33
Identities = 43/91 (47%), Positives = 66/91 (72%)
Query: 92 RPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDY 151
RP A TVKK+FVG +++D E L++YF Q+G++ + ++T++ +GKKRGF FV ++D+
Sbjct: 48 RPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDH 107
Query: 152 DPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
D VDK ++ H V G +V+KALSK+EMA
Sbjct: 108 DSVDKIVIQKYHTVNGHNCEVRKALSKQEMA 138
Score = 137 (53.3 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33
Identities = 25/42 (59%), Positives = 31/42 (73%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDP 44
KEPE LRKLFIGGL + T+ E+L+SHFE WG + D V + P
Sbjct: 8 KEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVDSQRP 49
Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 24/83 (28%), Positives = 46/83 (55%)
Query: 8 LRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQ 67
++K+F+GG+ T L+ +FE +G + + +M D + K RGF F+T+ VD
Sbjct: 55 VKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 114
Query: 68 AARPHTIDSKVVEPKRAVPRTEI 90
+ HT++ E ++A+ + E+
Sbjct: 115 IQKYHTVNGHNCEVRKALSKQEM 137
>MGI|MGI:1330294 [details] [associations]
symbol:Hnrnpab "heterogeneous nuclear ribonucleoprotein A/B"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001837 "epithelial to mesenchymal transition"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003688 "DNA
replication origin binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 MGI:MGI:1330294 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0000166 GO:GO:0003677
Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723 GO:GO:0030529
GO:GO:0001837 UniGene:Mm.490267 eggNOG:COG0724 HOGENOM:HOG000234441
HOVERGEN:HBG002295 GeneTree:ENSGT00700000104347 KO:K13044
InterPro:IPR012956 Pfam:PF08143 CTD:3182 OrthoDB:EOG42BX9K
ChiTaRS:HNRNPAB EMBL:D90151 EMBL:L36663 EMBL:AK076132
IPI:IPI00117288 PIR:JQ0448 RefSeq:NP_034578.1 UniGene:Mm.280842
ProteinModelPortal:Q99020 SMR:Q99020 DIP:DIP-31415N IntAct:Q99020
MINT:MINT-4132837 STRING:Q99020 PhosphoSite:Q99020 PaxDb:Q99020
PRIDE:Q99020 Ensembl:ENSMUST00000074669 GeneID:15384 KEGG:mmu:15384
NextBio:288056 Bgee:Q99020 Genevestigator:Q99020
GermOnline:ENSMUSG00000020358 Uniprot:Q99020
Length = 285
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 71/178 (39%), Positives = 107/178 (60%)
Query: 2 TKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAH 61
+K E K+F+GGL + TS + LK +F +G+VVD + DP T +SRGFGFI + +
Sbjct: 68 SKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSS 127
Query: 62 MVDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFG 121
V+ + H +D +V++PK+A+ + P VKK+FVG L + TEE ++EYFG
Sbjct: 128 SVEKVLDQKEHRLDGRVIDPKKAMAMKK--DP-----VKKIFVGGLNPEATEEKIREYFG 180
Query: 122 QFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKE 179
QFGE+ ++ L + + K+RGF F+ + + DPV K K H V G K ++K A KE
Sbjct: 181 QFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKVAQPKE 238
Score = 172 (65.6 bits), Expect = 6.7e-13, P = 6.7e-13
Identities = 35/96 (36%), Positives = 57/96 (59%)
Query: 89 EINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEY 148
+IN + K+FVG L D +++DLK+YF +FGEV + + TG+ RGFGF+ +
Sbjct: 64 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF 123
Query: 149 NDYDPVDKACLKGTHLVKGKKVDVKKALS-KEEMAK 183
D V+K + H + G+ +D KKA++ K++ K
Sbjct: 124 KDSSSVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVK 159
Score = 127 (49.8 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 27/95 (28%), Positives = 50/95 (52%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
K+P ++K+F+GGL+ + E ++ +F +G++ + + DP+ K RGF FIT+
Sbjct: 155 KDP--VKKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDP 212
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGA 97
V + HT+ E K A P+ + + G+
Sbjct: 213 VKKVLEKKFHTVSGSKCEIKVAQPKEVYQQQQYGS 247
>RGD|69255 [details] [associations]
symbol:Hnrnpab "heterogeneous nuclear ribonucleoprotein A/B"
species:10116 "Rattus norvegicus" [GO:0001837 "epithelial to
mesenchymal transition" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003688 "DNA replication origin binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:69255 GO:GO:0045892 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003688 HOVERGEN:HBG002295 HSSP:Q14103 InterPro:IPR012956
Pfam:PF08143 PIR:PC4375 PIR:PC4376 PIR:PC4377 UniGene:Rn.1427
UniGene:Rn.217734 EMBL:AF108653 IPI:IPI00208193
ProteinModelPortal:Q9Z0U8 SMR:Q9Z0U8 IntAct:Q9Z0U8 MINT:MINT-7138483
STRING:Q9Z0U8 PRIDE:Q9Z0U8 UCSC:RGD:69255 Genevestigator:Q9Z0U8
Uniprot:Q9Z0U8
Length = 298
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 71/178 (39%), Positives = 107/178 (60%)
Query: 2 TKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAH 61
+K E K+F+GGL + TS + LK +F +G+VVD + DP T +SRGFGFI + +
Sbjct: 81 SKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSS 140
Query: 62 MVDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFG 121
V+ + H +D +V++PK+A+ + P VKK+FVG L + TEE ++EYFG
Sbjct: 141 SVEKVLDQKEHRLDGRVIDPKKAMAMKK--DP-----VKKIFVGGLNPEATEEKIREYFG 193
Query: 122 QFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKE 179
QFGE+ ++ L + + K+RGF F+ + + DPV K K H V G K ++K A KE
Sbjct: 194 QFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKVAQPKE 251
Score = 172 (65.6 bits), Expect = 8.4e-13, P = 8.4e-13
Identities = 35/96 (36%), Positives = 57/96 (59%)
Query: 89 EINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEY 148
+IN + K+FVG L D +++DLK+YF +FGEV + + TG+ RGFGF+ +
Sbjct: 77 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF 136
Query: 149 NDYDPVDKACLKGTHLVKGKKVDVKKALS-KEEMAK 183
D V+K + H + G+ +D KKA++ K++ K
Sbjct: 137 KDSSSVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVK 172
Score = 127 (49.8 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 27/95 (28%), Positives = 50/95 (52%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
K+P ++K+F+GGL+ + E ++ +F +G++ + + DP+ K RGF FIT+
Sbjct: 168 KDP--VKKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDP 225
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGA 97
V + HT+ E K A P+ + + G+
Sbjct: 226 VKKVLEKKFHTVSGSKCEIKVAQPKEVYQQQQYGS 260
>UNIPROTKB|E9PTS0 [details] [associations]
symbol:Hnrnpab "Protein Hnrnpab" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:69255 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
InterPro:IPR012956 Pfam:PF08143 EMBL:AC105470 IPI:IPI00951862
Ensembl:ENSRNOT00000065584 ArrayExpress:E9PTS0 Uniprot:E9PTS0
Length = 331
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 71/178 (39%), Positives = 107/178 (60%)
Query: 2 TKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAH 61
+K E K+F+GGL + TS + LK +F +G+VVD + DP T +SRGFGFI + +
Sbjct: 67 SKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSS 126
Query: 62 MVDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFG 121
V+ + H +D +V++PK+A+ + P VKK+FVG L + TEE ++EYFG
Sbjct: 127 SVEKVLDQKEHRLDGRVIDPKKAMAMKK--DP-----VKKIFVGGLNPEATEEKIREYFG 179
Query: 122 QFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKE 179
QFGE+ ++ L + + K+RGF F+ + + DPV K K H V G K ++K A KE
Sbjct: 180 QFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKVAQPKE 237
Score = 172 (65.6 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 35/96 (36%), Positives = 57/96 (59%)
Query: 89 EINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEY 148
+IN + K+FVG L D +++DLK+YF +FGEV + + TG+ RGFGF+ +
Sbjct: 63 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF 122
Query: 149 NDYDPVDKACLKGTHLVKGKKVDVKKALS-KEEMAK 183
D V+K + H + G+ +D KKA++ K++ K
Sbjct: 123 KDSSSVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVK 158
Score = 127 (49.8 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 27/95 (28%), Positives = 50/95 (52%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
K+P ++K+F+GGL+ + E ++ +F +G++ + + DP+ K RGF FIT+
Sbjct: 154 KDP--VKKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDP 211
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGA 97
V + HT+ E K A P+ + + G+
Sbjct: 212 VKKVLEKKFHTVSGSKCEIKVAQPKEVYQQQQYGS 246
>UNIPROTKB|Q9QX80 [details] [associations]
symbol:Hnrnpab "Hnrpab protein" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:69255 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0030529 EMBL:CH473948 HOGENOM:HOG000234441 HOVERGEN:HBG002295
HSSP:Q14103 GeneTree:ENSGT00700000104347 KO:K13044
InterPro:IPR012956 Pfam:PF08143 CTD:3182 EMBL:AC105470
EMBL:AF216753 EMBL:BC066664 EMBL:AJ238855 IPI:IPI00212723
PIR:PC4375 PIR:PC4376 PIR:PC4377 RefSeq:NP_112620.2
RefSeq:XP_003750864.1 UniGene:Rn.1427 UniGene:Rn.217734 SMR:Q9QX80
STRING:Q9QX80 Ensembl:ENSRNOT00000033056 GeneID:100910156
GeneID:83498 KEGG:rno:100910156 KEGG:rno:83498 NextBio:615904
Genevestigator:Q9QX80 Uniprot:Q9QX80
Length = 285
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 71/178 (39%), Positives = 107/178 (60%)
Query: 2 TKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAH 61
+K E K+F+GGL + TS + LK +F +G+VVD + DP T +SRGFGFI + +
Sbjct: 68 SKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSS 127
Query: 62 MVDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFG 121
V+ + H +D +V++PK+A+ + P VKK+FVG L + TEE ++EYFG
Sbjct: 128 SVEKVLDQKEHRLDGRVIDPKKAMAMKK--DP-----VKKIFVGGLNPEATEEKIREYFG 180
Query: 122 QFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKE 179
QFGE+ ++ L + + K+RGF F+ + + DPV K K H V G K ++K A KE
Sbjct: 181 QFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKVAQPKE 238
Score = 172 (65.6 bits), Expect = 6.7e-13, P = 6.7e-13
Identities = 35/96 (36%), Positives = 57/96 (59%)
Query: 89 EINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEY 148
+IN + K+FVG L D +++DLK+YF +FGEV + + TG+ RGFGF+ +
Sbjct: 64 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF 123
Query: 149 NDYDPVDKACLKGTHLVKGKKVDVKKALS-KEEMAK 183
D V+K + H + G+ +D KKA++ K++ K
Sbjct: 124 KDSSSVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVK 159
Score = 127 (49.8 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 27/95 (28%), Positives = 50/95 (52%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
K+P ++K+F+GGL+ + E ++ +F +G++ + + DP+ K RGF FIT+
Sbjct: 155 KDP--VKKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDP 212
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGA 97
V + HT+ E K A P+ + + G+
Sbjct: 213 VKKVLEKKFHTVSGSKCEIKVAQPKEVYQQQQYGS 247
>UNIPROTKB|Q9QX81 [details] [associations]
symbol:Hnrnpab "RCG34663, isoform CRA_a" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0001837 "epithelial to mesenchymal transition" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:69255 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529 GO:GO:0001837
EMBL:CH473948 HOGENOM:HOG000234441 HOVERGEN:HBG002295 HSSP:Q14103
GeneTree:ENSGT00700000104347 KO:K13044 InterPro:IPR012956
Pfam:PF08143 OMA:FILFKDP OrthoDB:EOG42BX9K EMBL:AC105470 PIR:PC4375
PIR:PC4376 PIR:PC4377 UniGene:Rn.1427 UniGene:Rn.217734
GeneID:100910156 KEGG:rno:100910156 EMBL:AJ238854 IPI:IPI00212724
RefSeq:XP_003750865.1 SMR:Q9QX81 STRING:Q9QX81
Ensembl:ENSRNOT00000004885 InParanoid:Q9QX81 Genevestigator:Q9QX81
Uniprot:Q9QX81
Length = 332
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 71/178 (39%), Positives = 107/178 (60%)
Query: 2 TKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAH 61
+K E K+F+GGL + TS + LK +F +G+VVD + DP T +SRGFGFI + +
Sbjct: 68 SKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSS 127
Query: 62 MVDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFG 121
V+ + H +D +V++PK+A+ + P VKK+FVG L + TEE ++EYFG
Sbjct: 128 SVEKVLDQKEHRLDGRVIDPKKAMAMKK--DP-----VKKIFVGGLNPEATEEKIREYFG 180
Query: 122 QFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKE 179
QFGE+ ++ L + + K+RGF F+ + + DPV K K H V G K ++K A KE
Sbjct: 181 QFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKVAQPKE 238
Score = 172 (65.6 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 35/96 (36%), Positives = 57/96 (59%)
Query: 89 EINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEY 148
+IN + K+FVG L D +++DLK+YF +FGEV + + TG+ RGFGF+ +
Sbjct: 64 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF 123
Query: 149 NDYDPVDKACLKGTHLVKGKKVDVKKALS-KEEMAK 183
D V+K + H + G+ +D KKA++ K++ K
Sbjct: 124 KDSSSVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVK 159
Score = 127 (49.8 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 27/95 (28%), Positives = 50/95 (52%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
K+P ++K+F+GGL+ + E ++ +F +G++ + + DP+ K RGF FIT+
Sbjct: 155 KDP--VKKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDP 212
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGA 97
V + HT+ E K A P+ + + G+
Sbjct: 213 VKKVLEKKFHTVSGSKCEIKVAQPKEVYQQQQYGS 247
>UNIPROTKB|F1SA31 [details] [associations]
symbol:F1SA31 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104376 EMBL:CU856608
Ensembl:ENSSSCT00000014866 Uniprot:F1SA31
Length = 332
Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 72/176 (40%), Positives = 119/176 (67%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
KLFIGGL +T+ + L ++++ WG + D VV++DP ++KSR F + + VD A+AA
Sbjct: 17 KLFIGGLSSQTTGKGL-NYYKQWGKL-DCVVIRDPTSQKSR-FILLHFHPWLRVDAARAA 73
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
P +ID K+V PK AVPR + +P TVKKLF+G L +D E L++YF ++ ++ ++
Sbjct: 74 TPRSIDGKMVAPKHAVPREDYGKPGPLVTVKKLFIGGLTEDTEEHHLRDYFEKYEKIDAI 133
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMAKLK 185
++T++++ K RGFGFV ++D+D VDK L+ H V G +V+KALS+ ++ +++
Sbjct: 134 EIITDRQSSKIRGFGFVTFDDHDHVDKL-LQKNHTVNGHHAEVRKALSQSKIQEVQ 188
Score = 131 (51.2 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 27/83 (32%), Positives = 48/83 (57%)
Query: 8 LRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQ 67
++KLFIGGL T L+ +FE + + + ++ D Q+ K RGFGF+T+ VD
Sbjct: 103 VKKLFIGGLTEDTEEHHLRDYFEKYEKIDAIEIITDRQSSKIRGFGFVTFDDHDHVDKL- 161
Query: 68 AARPHTIDSKVVEPKRAVPRTEI 90
+ HT++ E ++A+ +++I
Sbjct: 162 LQKNHTVNGHHAEVRKALSQSKI 184
>POMBASE|SPBC660.15 [details] [associations]
symbol:SPBC660.15 "mRNA cleavage factor complex subunit
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=ISO] [GO:0003730 "mRNA 3'-UTR binding"
evidence=NAS] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005849 "mRNA cleavage factor
complex" evidence=ISO] [GO:0006378 "mRNA polyadenylation"
evidence=ISO] [GO:0006379 "mRNA cleavage" evidence=ISO]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 PomBase:SPBC660.15 GO:GO:0005737 GO:GO:0000166
EMBL:CU329671 Gene3D:3.30.70.330 GO:GO:0006378 GO:GO:0003730
eggNOG:COG0724 GO:GO:0006379 GO:GO:0005849 KO:K14411 HSSP:Q14103
OrthoDB:EOG4TF3VC PIR:T40627 RefSeq:NP_595094.1
ProteinModelPortal:O94432 SMR:O94432 STRING:O94432
EnsemblFungi:SPBC660.15.1 GeneID:2541150 KEGG:spo:SPBC660.15
OMA:CHKANDG NextBio:20802263 Uniprot:O94432
Length = 474
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 67/172 (38%), Positives = 109/172 (63%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+FIGGL++ T+ ++L+ +FE +G+V+D VM+D T +SRGFGF+T+ + V++ +
Sbjct: 164 KMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNEVMS- 222
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
+ H +D K+++PKRA+PR E + K+FVG + D TEE+ + +F QFG V
Sbjct: 223 KEHHLDGKIIDPKRAIPREEQEK------TAKMFVGGVPGDCTEEEFRNFFNQFGRVLDA 276
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEM 181
L+ +K+TG+ RGFGFV Y + V+ + + GK V+VK+A K +
Sbjct: 277 TLMMDKDTGRPRGFGFVTYENESAVEATMSQPYITIHGKPVEVKRATPKASL 328
Score = 165 (63.1 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 32/83 (38%), Positives = 52/83 (62%)
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLK 160
K+F+G L + T++ L++YF QFGEV ++ + TG+ RGFGF+ + + V++ K
Sbjct: 164 KMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNEVMSK 223
Query: 161 GTHLVKGKKVDVKKALSKEEMAK 183
HL GK +D K+A+ +EE K
Sbjct: 224 EHHL-DGKIIDPKRAIPREEQEK 245
Score = 157 (60.3 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 33/89 (37%), Positives = 52/89 (58%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
+E E K+F+GG+ + E ++ F +G V+D +M D T + RGFGF+TY +
Sbjct: 241 EEQEKTAKMFVGGVPGDCTEEEFRNFFNQFGRVLDATLMMDKDTGRPRGFGFVTYENESA 300
Query: 63 VDDAQAARPH-TIDSKVVEPKRAVPRTEI 90
V+ A ++P+ TI K VE KRA P+ +
Sbjct: 301 VE-ATMSQPYITIHGKPVEVKRATPKASL 328
>UNIPROTKB|F1M6M1 [details] [associations]
symbol:F1M6M1 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00550000074566 IPI:IPI00563231
Ensembl:ENSRNOT00000040517 Uniprot:F1M6M1
Length = 253
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 67/138 (48%), Positives = 97/138 (70%)
Query: 46 TKKSRGFGFITYSSAHMVDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVG 105
TK+SRGFGF+T +S VD ARPH +D +VVEPKRA+ R + RP+A TVKK+FVG
Sbjct: 1 TKRSRGFGFVTCTSVEKVDATMNARPHKVDGRVVEPKRAMSREDSQRPDAHLTVKKIFVG 60
Query: 106 SLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLV 165
S+++D E L++YF Q+G++ + ++ ++ + KKRGF FV ++D+D VDK + H V
Sbjct: 61 SIKEDTEEHHLRDYFEQYGKIELIEIMADRGSEKKRGFAFVTFDDHDSVDKIVTQKYHTV 120
Query: 166 KGK-KVDVKKALSKEEMA 182
G K +V+K LSK+EMA
Sbjct: 121 NGHHKCEVRKPLSKQEMA 138
Score = 117 (46.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 23/77 (29%), Positives = 43/77 (55%)
Query: 2 TKEPE-HL--RKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYS 58
++ P+ HL +K+F+G + T L+ +FE +G + + +M D ++K RGF F+T+
Sbjct: 45 SQRPDAHLTVKKIFVGSIKEDTEEHHLRDYFEQYGKIELIEIMADRGSEKKRGFAFVTFD 104
Query: 59 SAHMVDDAQAARPHTID 75
VD + HT++
Sbjct: 105 DHDSVDKIVTQKYHTVN 121
>UNIPROTKB|G3V6A5 [details] [associations]
symbol:Hnrpd "Heterogeneous nuclear ribonucleoprotein D,
isoform CRA_c" species:10116 "Rattus norvegicus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 RGD:620365 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529
GeneTree:ENSGT00700000104347 KO:K13044 InterPro:IPR012956
Pfam:PF08143 RefSeq:NP_001076008.1 UniGene:Rn.94022 GeneID:79256
KEGG:rno:79256 CTD:79256 NextBio:614748 EMBL:CH474022
Ensembl:ENSRNOT00000003173 Uniprot:G3V6A5
Length = 334
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 74/179 (41%), Positives = 107/179 (59%)
Query: 2 TKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAH 61
+K E K+FIGGL + T+ + LK +F +GDVVD + DP T +SRGFGF+ + +
Sbjct: 69 SKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESE 128
Query: 62 MVDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFG 121
VD + H ++ KV++PKRA + P VKK+FVG L D EE ++EYFG
Sbjct: 129 SVDKVMDQKEHKLNGKVIDPKRA-KAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFG 182
Query: 122 QFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEE 180
FGEV S+ L + +T K+RGF F+ + + +PV K K H V K ++K A+SKE+
Sbjct: 183 GFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQ 241
Score = 171 (65.3 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 35/85 (41%), Positives = 52/85 (61%)
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLK 160
K+F+G L D T++DLK+YF +FG+V L + TG+ RGFGFV + + + VDK +
Sbjct: 77 KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 136
Query: 161 GTHLVKGKKVDVK--KALSKEEMAK 183
H + GK +D K KA+ +E K
Sbjct: 137 KEHKLNGKVIDPKRAKAMKTKEPVK 161
Score = 127 (49.8 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 28/93 (30%), Positives = 48/93 (51%)
Query: 2 TKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAH 61
TKEP ++K+F+GGL T E ++ +F +G+V + + D +T K RGF FIT+
Sbjct: 156 TKEP--VKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEE 213
Query: 62 MVDDAQAARPHTIDSKVVEPKRAVPRTEINRPE 94
V + H + E K A+ + + + +
Sbjct: 214 PVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQ 246
>UNIPROTKB|G3N220 [details] [associations]
symbol:G3N220 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005730 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0071013 GeneTree:ENSGT00700000104376 EMBL:DAAA02027300
Ensembl:ENSBTAT00000063435 OMA:GWEDRSH Uniprot:G3N220
Length = 310
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 67/141 (47%), Positives = 100/141 (70%)
Query: 41 MKDPQTKKSRGFGFITYSSAHMVDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVK 100
M+DP+TK+SRGFGF+TYS VD A ARPH +VVEPKRAV R + +P A TVK
Sbjct: 1 MRDPKTKRSRGFGFVTYSCVEEVDAAMYARPH---KRVVEPKRAVSREDSVKPGAHLTVK 57
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLK 160
K+FVG +++D E +L++ F +G++ ++ ++ ++++GKKRG FV ++D+D VDK ++
Sbjct: 58 KIFVGGIKEDTEEYNLRDCFENYGKIETIEVMEDRQSGKKRGCAFVTFDDHDTVDKIVVQ 117
Query: 161 GTHLVKGKKVDVKKALSKEEM 181
H + G +VKKALSK+EM
Sbjct: 118 KYHTINGHNCEVKKALSKQEM 138
Score = 135 (52.6 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 30/90 (33%), Positives = 48/90 (53%)
Query: 3 KEPEHL--RKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSA 60
K HL +K+F+GG+ T L+ FE +G + + VM+D Q+ K RG F+T+
Sbjct: 49 KPGAHLTVKKIFVGGIKEDTEEYNLRDCFENYGKIETIEVMEDRQSGKKRGCAFVTFDDH 108
Query: 61 HMVDDAQAARPHTIDSKVVEPKRAVPRTEI 90
VD + HTI+ E K+A+ + E+
Sbjct: 109 DTVDKIVVQKYHTINGHNCEVKKALSKQEM 138
>UNIPROTKB|F1M5K3 [details] [associations]
symbol:F1M5K3 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00550000074566 IPI:IPI00567346
Ensembl:ENSRNOT00000044298 Uniprot:F1M5K3
Length = 327
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 78/182 (42%), Positives = 115/182 (63%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
++PE LRKLFI G + T++E+L+SHFE WG D V M+D TK+ R FGF+ Y++
Sbjct: 28 EDPEELRKLFIRG-SFETTNESLRSHFEEWGTFTDCV-MRDLNTKRFRDFGFVIYATVEE 85
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARP +D ++VEPK A+ R + RP A T KK+FVG +++D TE K +
Sbjct: 86 VDAAMNARPRKVDGRLVEPKSAMSREKSQRPGAHLTAKKIFVGGIKED-TE---KHH--- 138
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
++T++ +G+KR F FV ++D+D VDK ++ V G+ +V+K LSK+EMA
Sbjct: 139 --------IMTDRGSGRKRDFAFVAFDDHDSVDKIVIQKYCTVNGQNCEVRKTLSKQEMA 190
Query: 183 KL 184
L
Sbjct: 191 VL 192
>UNIPROTKB|Q3ZC44 [details] [associations]
symbol:HNRNPAB "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529
eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295
GeneTree:ENSGT00700000104347 KO:K13044 InterPro:IPR012956
Pfam:PF08143 CTD:3182 OMA:FILFKDP EMBL:DAAA02020063
EMBL:DAAA02020062 EMBL:BC102923 IPI:IPI00843025
RefSeq:NP_001035612.1 UniGene:Bt.58979 SMR:Q3ZC44
Ensembl:ENSBTAT00000018114 GeneID:513410 KEGG:bta:513410
NextBio:20870841 Uniprot:Q3ZC44
Length = 285
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 69/178 (38%), Positives = 108/178 (60%)
Query: 2 TKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAH 61
+K E K+F+GGL + TS + LK +F +G+VVD + DP T +SRGFGFI + A
Sbjct: 63 SKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAT 122
Query: 62 MVDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFG 121
V+ + H +D +V++PK+A+ + P VKK+FVG L + TEE ++EYFG
Sbjct: 123 SVEKVLDQKEHRLDGRVIDPKKAMAMKK--DP-----VKKIFVGGLNPEATEEKIREYFG 175
Query: 122 QFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKE 179
+FGE+ ++ L + ++ K+RGF F+ + + +PV K K H + G K ++K A KE
Sbjct: 176 EFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVAQPKE 233
Score = 171 (65.3 bits), Expect = 8.9e-13, P = 8.9e-13
Identities = 35/96 (36%), Positives = 57/96 (59%)
Query: 89 EINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEY 148
+IN + K+FVG L D +++DLK+YF +FGEV + + TG+ RGFGF+ +
Sbjct: 59 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF 118
Query: 149 NDYDPVDKACLKGTHLVKGKKVDVKKALS-KEEMAK 183
D V+K + H + G+ +D KKA++ K++ K
Sbjct: 119 KDATSVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVK 154
Score = 133 (51.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 28/95 (29%), Positives = 51/95 (53%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
K+P ++K+F+GGL+ + E ++ +F +G++ + + DP++ K RGF FIT+
Sbjct: 150 KDP--VKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEP 207
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGA 97
V + HTI E K A P+ + + G+
Sbjct: 208 VKKVLEKKFHTISGSKCEIKVAQPKEVYQQQQYGS 242
>UNIPROTKB|D6R9P3 [details] [associations]
symbol:HNRNPAB "Heterogeneous nuclear ribonucleoprotein
A/B" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000234441
InterPro:IPR012956 Pfam:PF08143 EMBL:AC136632 HGNC:HGNC:5034
ChiTaRS:HNRNPAB IPI:IPI00964686 ProteinModelPortal:D6R9P3
SMR:D6R9P3 Ensembl:ENST00000515193 ArrayExpress:D6R9P3 Bgee:D6R9P3
Uniprot:D6R9P3
Length = 280
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 70/178 (39%), Positives = 107/178 (60%)
Query: 2 TKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAH 61
+K E K+F+GGL + TS + LK +F +G+VVD + DP T +SRGFGFI + A
Sbjct: 63 SKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAA 122
Query: 62 MVDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFG 121
V+ + H +D +V++PK+A+ + P VKK+FVG L + TEE ++EYFG
Sbjct: 123 SVEKVLDQKEHRLDGRVIDPKKAMAMKK--DP-----VKKIFVGGLNPEATEEKIREYFG 175
Query: 122 QFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKE 179
+FGE+ ++ L + + K+RGF F+ + + +PV K K H V G K ++K A KE
Sbjct: 176 EFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPKE 233
Score = 170 (64.9 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 35/96 (36%), Positives = 57/96 (59%)
Query: 89 EINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEY 148
+IN + K+FVG L D +++DLK+YF +FGEV + + TG+ RGFGF+ +
Sbjct: 59 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF 118
Query: 149 NDYDPVDKACLKGTHLVKGKKVDVKKALS-KEEMAK 183
D V+K + H + G+ +D KKA++ K++ K
Sbjct: 119 KDAASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVK 154
Score = 130 (50.8 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 27/95 (28%), Positives = 50/95 (52%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
K+P ++K+F+GGL+ + E ++ +F +G++ + + DP+ K RGF FIT+
Sbjct: 150 KDP--VKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEP 207
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGA 97
V + HT+ E K A P+ + + G+
Sbjct: 208 VKKVLEKKFHTVSGSKCEIKVAQPKEVYQQQQYGS 242
>UNIPROTKB|D6RBZ0 [details] [associations]
symbol:HNRNPAB "Heterogeneous nuclear ribonucleoprotein
A/B" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000234441
InterPro:IPR012956 Pfam:PF08143 EMBL:AC136632 HGNC:HGNC:5034
ChiTaRS:HNRNPAB IPI:IPI00964992 ProteinModelPortal:D6RBZ0
SMR:D6RBZ0 Ensembl:ENST00000506339 ArrayExpress:D6RBZ0 Bgee:D6RBZ0
Uniprot:D6RBZ0
Length = 327
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 70/178 (39%), Positives = 107/178 (60%)
Query: 2 TKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAH 61
+K E K+F+GGL + TS + LK +F +G+VVD + DP T +SRGFGFI + A
Sbjct: 63 SKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAA 122
Query: 62 MVDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFG 121
V+ + H +D +V++PK+A+ + P VKK+FVG L + TEE ++EYFG
Sbjct: 123 SVEKVLDQKEHRLDGRVIDPKKAMAMKK--DP-----VKKIFVGGLNPEATEEKIREYFG 175
Query: 122 QFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKE 179
+FGE+ ++ L + + K+RGF F+ + + +PV K K H V G K ++K A KE
Sbjct: 176 EFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPKE 233
Score = 170 (64.9 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 35/96 (36%), Positives = 57/96 (59%)
Query: 89 EINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEY 148
+IN + K+FVG L D +++DLK+YF +FGEV + + TG+ RGFGF+ +
Sbjct: 59 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF 118
Query: 149 NDYDPVDKACLKGTHLVKGKKVDVKKALS-KEEMAK 183
D V+K + H + G+ +D KKA++ K++ K
Sbjct: 119 KDAASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVK 154
Score = 130 (50.8 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 27/95 (28%), Positives = 50/95 (52%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
K+P ++K+F+GGL+ + E ++ +F +G++ + + DP+ K RGF FIT+
Sbjct: 150 KDP--VKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEP 207
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGA 97
V + HT+ E K A P+ + + G+
Sbjct: 208 VKKVLEKKFHTVSGSKCEIKVAQPKEVYQQQQYGS 242
>UNIPROTKB|D6RD18 [details] [associations]
symbol:HNRNPAB "Heterogeneous nuclear ribonucleoprotein
A/B" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000234441
InterPro:IPR012956 Pfam:PF08143 EMBL:AC136632 HGNC:HGNC:5034
ChiTaRS:HNRNPAB IPI:IPI00966854 ProteinModelPortal:D6RD18
SMR:D6RD18 Ensembl:ENST00000514633 ArrayExpress:D6RD18 Bgee:D6RD18
Uniprot:D6RD18
Length = 283
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 70/178 (39%), Positives = 107/178 (60%)
Query: 2 TKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAH 61
+K E K+F+GGL + TS + LK +F +G+VVD + DP T +SRGFGFI + A
Sbjct: 63 SKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAA 122
Query: 62 MVDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFG 121
V+ + H +D +V++PK+A+ + P VKK+FVG L + TEE ++EYFG
Sbjct: 123 SVEKVLDQKEHRLDGRVIDPKKAMAMKK--DP-----VKKIFVGGLNPEATEEKIREYFG 175
Query: 122 QFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKE 179
+FGE+ ++ L + + K+RGF F+ + + +PV K K H V G K ++K A KE
Sbjct: 176 EFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPKE 233
Score = 170 (64.9 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 35/96 (36%), Positives = 57/96 (59%)
Query: 89 EINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEY 148
+IN + K+FVG L D +++DLK+YF +FGEV + + TG+ RGFGF+ +
Sbjct: 59 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF 118
Query: 149 NDYDPVDKACLKGTHLVKGKKVDVKKALS-KEEMAK 183
D V+K + H + G+ +D KKA++ K++ K
Sbjct: 119 KDAASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVK 154
Score = 130 (50.8 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 27/95 (28%), Positives = 50/95 (52%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
K+P ++K+F+GGL+ + E ++ +F +G++ + + DP+ K RGF FIT+
Sbjct: 150 KDP--VKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEP 207
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGA 97
V + HT+ E K A P+ + + G+
Sbjct: 208 VKKVLEKKFHTVSGSKCEIKVAQPKEVYQQQQYGS 242
>TAIR|locus:2077392 [details] [associations]
symbol:AT3G07810 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005576 "extracellular region" evidence=ISM] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002686 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
KO:K14411 IPI:IPI00546643 RefSeq:NP_850539.1 UniGene:At.19375
ProteinModelPortal:F4JFN7 SMR:F4JFN7 PRIDE:F4JFN7
EnsemblPlants:AT3G07810.2 GeneID:819972 KEGG:ath:AT3G07810
OMA:YYIGNTN Uniprot:F4JFN7
Length = 495
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 72/182 (39%), Positives = 109/182 (59%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
KLFIGG+ + T+ E LK +F ++G+V++ V++KD T ++RGFGF+ ++ V +
Sbjct: 7 KLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADP-AVAEIVIT 65
Query: 70 RPHTIDSKVVEPKRAVPRTE---INR---------PEAGATVKKLFVGSLRDDITEEDLK 117
H ID ++VE K+AVPR + +NR P +K+FVG L +TE D K
Sbjct: 66 EKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVTESDFK 125
Query: 118 EYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALS 177
YF QFG T V ++ + T + RGFGF+ Y+ + V+K LK H + GK V+VK+A+
Sbjct: 126 TYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEVKRAVP 185
Query: 178 KE 179
KE
Sbjct: 186 KE 187
Score = 186 (70.5 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 37/83 (44%), Positives = 50/83 (60%)
Query: 5 PEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVD 64
P RK+F+GGL + K++FE +G DVVVM D T++ RGFGFITY S V+
Sbjct: 104 PGRTRKIFVGGLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVE 163
Query: 65 DAQAARPHTIDSKVVEPKRAVPR 87
H ++ K+VE KRAVP+
Sbjct: 164 KVLLKTFHELNGKMVEVKRAVPK 186
Score = 163 (62.4 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 32/80 (40%), Positives = 49/80 (61%)
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLK 160
KLF+G + D EE LKEYF FGEV ++ ++ TG+ RGFGFV + D V + +
Sbjct: 7 KLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFAD-PAVAEIVIT 65
Query: 161 GTHLVKGKKVDVKKALSKEE 180
H + G+ V+ KKA+ +++
Sbjct: 66 EKHNIDGRLVEAKKAVPRDD 85
>UNIPROTKB|B4DTC3 [details] [associations]
symbol:HNRNPD "cDNA FLJ54150, highly similar to
Heterogeneous nuclear ribonucleoprotein D0" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0030529 HOGENOM:HOG000234441 HOVERGEN:HBG002295 EMBL:AC124016
UniGene:Hs.480073 HGNC:HGNC:5036 ChiTaRS:HNRNPD InterPro:IPR012956
Pfam:PF08143 EMBL:AK300149 IPI:IPI01014602 SMR:B4DTC3 STRING:B4DTC3
Ensembl:ENST00000543098 Uniprot:B4DTC3
Length = 303
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 73/179 (40%), Positives = 107/179 (59%)
Query: 2 TKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAH 61
+K E K+FIGGL + T+ + LK +F +G+VVD + DP T +SRGFGF+ + +
Sbjct: 38 SKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESE 97
Query: 62 MVDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFG 121
VD + H ++ KV++PKRA + P VKK+FVG L D EE ++EYFG
Sbjct: 98 SVDKVMDQKEHKLNGKVIDPKRA-KAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFG 151
Query: 122 QFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEE 180
FGEV S+ L + +T K+RGF F+ + + +PV K K H V K ++K A+SKE+
Sbjct: 152 GFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQ 210
Score = 174 (66.3 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 36/85 (42%), Positives = 52/85 (61%)
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLK 160
K+F+G L D T++DLK+YF +FGEV L + TG+ RGFGFV + + + VDK +
Sbjct: 46 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 105
Query: 161 GTHLVKGKKVDVK--KALSKEEMAK 183
H + GK +D K KA+ +E K
Sbjct: 106 KEHKLNGKVIDPKRAKAMKTKEPVK 130
Score = 127 (49.8 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 28/93 (30%), Positives = 48/93 (51%)
Query: 2 TKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAH 61
TKEP ++K+F+GGL T E ++ +F +G+V + + D +T K RGF FIT+
Sbjct: 125 TKEP--VKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEE 182
Query: 62 MVDDAQAARPHTIDSKVVEPKRAVPRTEINRPE 94
V + H + E K A+ + + + +
Sbjct: 183 PVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQ 215
>RGD|620365 [details] [associations]
symbol:Hnrpd "heterogeneous nuclear ribonucleoprotein D"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000291 "nuclear-transcribed mRNA catabolic
process, exonucleolytic" evidence=TAS] [GO:0003723 "RNA binding"
evidence=ISO;ISS] [GO:0003729 "mRNA binding" evidence=TAS]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006913 "nucleocytoplasmic transport"
evidence=TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA;ISO;ISS] [GO:0042162 "telomeric DNA binding"
evidence=IEA;ISO;ISS] [GO:0043488 "regulation of mRNA stability"
evidence=IEA;ISO] [GO:0048255 "mRNA stabilization" evidence=IDA]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:620365 GO:GO:0005829 GO:GO:0005634 GO:GO:0000166 GO:GO:0003729
Gene3D:3.30.70.330 GO:GO:0006913 GO:GO:0048255 GO:GO:0030529
GO:GO:0042162 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K13044
OrthoDB:EOG49W2FZ GermOnline:ENSRNOG00000002292 InterPro:IPR012956
Pfam:PF08143 EMBL:AB046615 EMBL:AB046616 EMBL:AB046617
EMBL:AB046618 IPI:IPI00201032 IPI:IPI00231383 IPI:IPI00231384
IPI:IPI00231385 RefSeq:NP_001076008.1 RefSeq:NP_001076009.1
RefSeq:NP_001076010.1 RefSeq:NP_077380.2 UniGene:Rn.94022
ProteinModelPortal:Q9JJ54 SMR:Q9JJ54 STRING:Q9JJ54
PhosphoSite:Q9JJ54 PRIDE:Q9JJ54 GeneID:79256 KEGG:rno:79256
UCSC:RGD:620365 CTD:79256 InParanoid:Q9JJ54 NextBio:614748
ArrayExpress:Q9JJ54 Genevestigator:Q9JJ54 GO:GO:0000291
Uniprot:Q9JJ54
Length = 353
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 72/171 (42%), Positives = 104/171 (60%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+FIGGL + T+ + LK +F +GDVVD + DP T +SRGFGF+ + + VD
Sbjct: 96 KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 155
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
+ H ++ KV++PKRA + P VKK+FVG L D EE ++EYFG FGEV S+
Sbjct: 156 KEHKLNGKVIDPKRA-KAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 209
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEE 180
L + +T K+RGF F+ + + +PV K K H V K ++K A+SKE+
Sbjct: 210 ELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQ 260
Score = 171 (65.3 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 35/85 (41%), Positives = 52/85 (61%)
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLK 160
K+F+G L D T++DLK+YF +FG+V L + TG+ RGFGFV + + + VDK +
Sbjct: 96 KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 155
Query: 161 GTHLVKGKKVDVK--KALSKEEMAK 183
H + GK +D K KA+ +E K
Sbjct: 156 KEHKLNGKVIDPKRAKAMKTKEPVK 180
Score = 127 (49.8 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 28/93 (30%), Positives = 48/93 (51%)
Query: 2 TKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAH 61
TKEP ++K+F+GGL T E ++ +F +G+V + + D +T K RGF FIT+
Sbjct: 175 TKEP--VKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEE 232
Query: 62 MVDDAQAARPHTIDSKVVEPKRAVPRTEINRPE 94
V + H + E K A+ + + + +
Sbjct: 233 PVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQ 265
>UNIPROTKB|G3V6A4 [details] [associations]
symbol:Hnrpd "Protein Hnrpd" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:620365 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0030529 GeneTree:ENSGT00700000104347 KO:K13044
InterPro:IPR012956 Pfam:PF08143 RefSeq:NP_001076009.1
UniGene:Rn.94022 GeneID:79256 KEGG:rno:79256 CTD:79256
NextBio:614748 EMBL:CH474022 Ensembl:ENSRNOT00000003158
Uniprot:G3V6A4
Length = 304
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 72/171 (42%), Positives = 104/171 (60%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+FIGGL + T+ + LK +F +GDVVD + DP T +SRGFGF+ + + VD
Sbjct: 96 KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 155
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
+ H ++ KV++PKRA + P VKK+FVG L D EE ++EYFG FGEV S+
Sbjct: 156 KEHKLNGKVIDPKRA-KAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 209
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEE 180
L + +T K+RGF F+ + + +PV K K H V K ++K A+SKE+
Sbjct: 210 ELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQ 260
Score = 171 (65.3 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 35/85 (41%), Positives = 52/85 (61%)
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLK 160
K+F+G L D T++DLK+YF +FG+V L + TG+ RGFGFV + + + VDK +
Sbjct: 96 KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 155
Query: 161 GTHLVKGKKVDVK--KALSKEEMAK 183
H + GK +D K KA+ +E K
Sbjct: 156 KEHKLNGKVIDPKRAKAMKTKEPVK 180
Score = 127 (49.8 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 28/93 (30%), Positives = 48/93 (51%)
Query: 2 TKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAH 61
TKEP ++K+F+GGL T E ++ +F +G+V + + D +T K RGF FIT+
Sbjct: 175 TKEP--VKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEE 232
Query: 62 MVDDAQAARPHTIDSKVVEPKRAVPRTEINRPE 94
V + H + E K A+ + + + +
Sbjct: 233 PVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQ 265
>UNIPROTKB|Q9JJ54 [details] [associations]
symbol:Hnrnpd "Heterogeneous nuclear ribonucleoprotein D0"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 RGD:620365 GO:GO:0005829
GO:GO:0005634 GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330
GO:GO:0006913 GO:GO:0048255 GO:GO:0030529 GO:GO:0042162
HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K13044 OrthoDB:EOG49W2FZ
GermOnline:ENSRNOG00000002292 InterPro:IPR012956 Pfam:PF08143
EMBL:AB046615 EMBL:AB046616 EMBL:AB046617 EMBL:AB046618
IPI:IPI00201032 IPI:IPI00231383 IPI:IPI00231384 IPI:IPI00231385
RefSeq:NP_001076008.1 RefSeq:NP_001076009.1 RefSeq:NP_001076010.1
RefSeq:NP_077380.2 UniGene:Rn.94022 ProteinModelPortal:Q9JJ54
SMR:Q9JJ54 STRING:Q9JJ54 PhosphoSite:Q9JJ54 PRIDE:Q9JJ54
GeneID:79256 KEGG:rno:79256 UCSC:RGD:620365 CTD:79256
InParanoid:Q9JJ54 NextBio:614748 ArrayExpress:Q9JJ54
Genevestigator:Q9JJ54 GO:GO:0000291 Uniprot:Q9JJ54
Length = 353
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 72/171 (42%), Positives = 104/171 (60%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+FIGGL + T+ + LK +F +GDVVD + DP T +SRGFGF+ + + VD
Sbjct: 96 KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 155
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
+ H ++ KV++PKRA + P VKK+FVG L D EE ++EYFG FGEV S+
Sbjct: 156 KEHKLNGKVIDPKRA-KAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 209
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEE 180
L + +T K+RGF F+ + + +PV K K H V K ++K A+SKE+
Sbjct: 210 ELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQ 260
Score = 171 (65.3 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 35/85 (41%), Positives = 52/85 (61%)
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLK 160
K+F+G L D T++DLK+YF +FG+V L + TG+ RGFGFV + + + VDK +
Sbjct: 96 KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 155
Query: 161 GTHLVKGKKVDVK--KALSKEEMAK 183
H + GK +D K KA+ +E K
Sbjct: 156 KEHKLNGKVIDPKRAKAMKTKEPVK 180
Score = 127 (49.8 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 28/93 (30%), Positives = 48/93 (51%)
Query: 2 TKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAH 61
TKEP ++K+F+GGL T E ++ +F +G+V + + D +T K RGF FIT+
Sbjct: 175 TKEP--VKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEE 232
Query: 62 MVDDAQAARPHTIDSKVVEPKRAVPRTEINRPE 94
V + H + E K A+ + + + +
Sbjct: 233 PVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQ 265
>UNIPROTKB|F8W646 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AC078778 HGNC:HGNC:5031 ChiTaRS:HNRNPA1 IPI:IPI01022306
ProteinModelPortal:F8W646 SMR:F8W646 PRIDE:F8W646
Ensembl:ENST00000547708 ArrayExpress:F8W646 Bgee:F8W646
Uniprot:F8W646
Length = 156
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 65/103 (63%), Positives = 79/103 (76%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFIGGL + T+ E+L+SHFE WG + D VVM+DP TK+SRGFGF+TY++
Sbjct: 8 KEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE 67
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVG 105
VD A ARPH +D +VVEPKRAV R + RP A TVKK+FVG
Sbjct: 68 VDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVG 110
Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 32/88 (36%), Positives = 53/88 (60%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ ++KLF+G L + T+E L+ +F Q+G +T ++ + T + RGFGFV Y +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEE 180
VD A H V G+ V+ K+A+S+E+
Sbjct: 67 EVDAAMNARPHKVDGRVVEPKRAVSRED 94
>WB|WBGene00003423 [details] [associations]
symbol:msi-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 KO:K14411
GeneTree:ENSGT00700000104255 HSSP:Q61474 EMBL:Z35601 EMBL:AB036738
PIR:T24148 RefSeq:NP_497799.1 UniGene:Cel.19474
ProteinModelPortal:G5EFS2 SMR:G5EFS2 EnsemblMetazoa:R10E9.1.1
EnsemblMetazoa:R10E9.1.2 GeneID:175514 KEGG:cel:CELE_R10E9.1
CTD:175514 WormBase:R10E9.1 OMA:VADKVCE NextBio:888480
Uniprot:G5EFS2
Length = 320
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 70/172 (40%), Positives = 105/172 (61%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+FIGGL ++T++E L+ +F +G+V + +VM+DP TK++RGFGFIT+ VD
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNN 105
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
R H +D K ++PK A P+ + + KK+F+G L T ED+K+YF +G+V
Sbjct: 106 REHELDGKKIDPKVAFPKR--TQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDA 163
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEM 181
L+ +K T + RGFGFV ++ + DK C H + GK V+ KKA KE M
Sbjct: 164 MLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPKEVM 215
Score = 179 (68.1 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 36/87 (41%), Positives = 51/87 (58%)
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLK 160
K+F+G L T E+L++YFG+FGEV ++ + T + RGFGF+ + D VDK
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNN 105
Query: 161 GTHLVKGKKVDVKKALSKEEMAKLKTR 187
H + GKK+D K A K AKL T+
Sbjct: 106 REHELDGKKIDPKVAFPKRTQAKLVTK 132
Score = 168 (64.2 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 34/85 (40%), Positives = 53/85 (62%)
Query: 9 RKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQA 68
+K+FIGGL ++ E +K +FE +G V D ++M D T++ RGFGF+T+ S + D
Sbjct: 134 KKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCE 193
Query: 69 ARPHTIDSKVVEPKRAVPRTEINRP 93
H I+ K+VE K+A P+ E+ P
Sbjct: 194 IHFHEINGKMVECKKAQPK-EVMLP 217
>UNIPROTKB|F1NCW4 [details] [associations]
symbol:HNRNPD "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0042162 "telomeric DNA binding"
evidence=IEA] [GO:0043488 "regulation of mRNA stability"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0030529 GO:GO:0043488 GO:GO:0042162
GeneTree:ENSGT00700000104347 OMA:PNQNWNQ EMBL:AADN02009040
IPI:IPI00819680 Ensembl:ENSGALT00000038011 ArrayExpress:F1NCW4
Uniprot:F1NCW4
Length = 258
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 71/171 (41%), Positives = 104/171 (60%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+FIGGL + T+ + LK +F +G+VVD + DP T +SRGFGF+ + + VD
Sbjct: 1 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 60
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
+ H ++ KV++PKRA + P VKK+FVG L D EE ++EYFG FGEV S+
Sbjct: 61 KEHKLNGKVIDPKRA-KAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGAFGEVESI 114
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEE 180
L + +T K+RGF F+ + + +PV K K H V K ++K A+SKE+
Sbjct: 115 ELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQ 165
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 36/85 (42%), Positives = 52/85 (61%)
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLK 160
K+F+G L D T++DLK+YF +FGEV L + TG+ RGFGFV + + + VDK +
Sbjct: 1 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 60
Query: 161 GTHLVKGKKVDVK--KALSKEEMAK 183
H + GK +D K KA+ +E K
Sbjct: 61 KEHKLNGKVIDPKRAKAMKTKEPVK 85
Score = 135 (52.6 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 33/107 (30%), Positives = 55/107 (51%)
Query: 2 TKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAH 61
TKEP ++K+F+GGL T E ++ +F A+G+V + + D +T K RGF FIT+
Sbjct: 80 TKEP--VKKIFVGGLSPDTPEEKIREYFGAFGEVESIELPMDNKTNKRRGFCFITFKEEE 137
Query: 62 MVDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLR 108
V + H + E K A+ + + + + + + FVG R
Sbjct: 138 PVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGS-RGGFVGRAR 183
>MGI|MGI:101947 [details] [associations]
symbol:Hnrnpd "heterogeneous nuclear ribonucleoprotein D"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005829 "cytosol" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=ISO] [GO:0042162
"telomeric DNA binding" evidence=ISO] [GO:0043488 "regulation of
mRNA stability" evidence=IMP] [GO:0048255 "mRNA stabilization"
evidence=ISO] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 MGI:MGI:101947 GO:GO:0005829
GO:GO:0005634 GO:GO:0006355 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0006351 GO:GO:0003723 GO:GO:0048255 GO:GO:0030529
GO:GO:0043488 GO:GO:0042162 eggNOG:COG0724 HOGENOM:HOG000234441
HOVERGEN:HBG002295 GeneTree:ENSGT00700000104347 KO:K13044
OrthoDB:EOG49W2FZ CTD:3184 OMA:PNQNWNQ ChiTaRS:HNRNPD
InterPro:IPR012956 Pfam:PF08143 EMBL:U11273 EMBL:U11274
EMBL:BC011172 EMBL:BC049098 IPI:IPI00230086 IPI:IPI00330958
IPI:IPI00336873 IPI:IPI00336874 PIR:I49069 PIR:I49070
RefSeq:NP_001070733.1 RefSeq:NP_001070734.1 RefSeq:NP_001070735.1
RefSeq:NP_031542.2 UniGene:Mm.150231 ProteinModelPortal:Q60668
SMR:Q60668 DIP:DIP-31411N IntAct:Q60668 STRING:Q60668
PhosphoSite:Q60668 PaxDb:Q60668 PRIDE:Q60668
Ensembl:ENSMUST00000019128 Ensembl:ENSMUST00000172361 GeneID:11991
KEGG:mmu:11991 UCSC:uc008ygt.1 UCSC:uc008ygu.1 InParanoid:Q60668
NextBio:280159 Bgee:Q60668 Genevestigator:Q60668
GermOnline:ENSMUSG00000000568 Uniprot:Q60668
Length = 355
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 71/171 (41%), Positives = 104/171 (60%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+FIGGL + T+ + LK +F +G+VVD + DP T +SRGFGF+ + + VD
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
+ H ++ KV++PKRA + P VKK+FVG L D EE ++EYFG FGEV S+
Sbjct: 158 KEHKLNGKVIDPKRA-KAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 211
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEE 180
L + +T K+RGF F+ + + +PV K K H V K ++K A+SKE+
Sbjct: 212 ELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQ 262
Score = 177 (67.4 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 44/124 (35%), Positives = 66/124 (53%)
Query: 65 DAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVK---KLFVGSLRDDITEEDLKEYFG 121
+A+ A+ ID+ E + EA A + K+F+G L D T++DLK+YF
Sbjct: 62 EAEGAK---IDASKNEEDEGHSNSSPRHTEAAAAQREEWKMFIGGLSWDTTKKDLKDYFS 118
Query: 122 QFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVK--KALSKE 179
+FGEV L + TG+ RGFGFV + + + VDK + H + GK +D K KA+ +
Sbjct: 119 KFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTK 178
Query: 180 EMAK 183
E K
Sbjct: 179 EPVK 182
Score = 127 (49.8 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 28/93 (30%), Positives = 48/93 (51%)
Query: 2 TKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAH 61
TKEP ++K+F+GGL T E ++ +F +G+V + + D +T K RGF FIT+
Sbjct: 177 TKEP--VKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEE 234
Query: 62 MVDDAQAARPHTIDSKVVEPKRAVPRTEINRPE 94
V + H + E K A+ + + + +
Sbjct: 235 PVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQ 267
>UNIPROTKB|A5D9H5 [details] [associations]
symbol:HNRPD "Heterogeneous nuclear ribonucleoprotein D"
species:9913 "Bos taurus" [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529
eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295
GeneTree:ENSGT00700000104347 KO:K13044 CTD:3184 InterPro:IPR012956
Pfam:PF08143 EMBL:DAAA02018245 EMBL:BT030594 IPI:IPI00905408
RefSeq:NP_001091533.1 UniGene:Bt.52882 SMR:A5D9H5 STRING:A5D9H5
Ensembl:ENSBTAT00000056365 GeneID:527471 KEGG:bta:527471
NextBio:20874604 Uniprot:A5D9H5
Length = 306
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 71/171 (41%), Positives = 104/171 (60%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+FIGGL + T+ + LK +F +G+VVD + DP T +SRGFGF+ + + VD
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
+ H ++ KV++PKRA + P VKK+FVG L D EE ++EYFG FGEV S+
Sbjct: 158 KEHKLNGKVIDPKRA-KAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 211
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEE 180
L + +T K+RGF F+ + + +PV K K H V K ++K A+SKE+
Sbjct: 212 ELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQ 262
Score = 174 (66.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 36/85 (42%), Positives = 52/85 (61%)
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLK 160
K+F+G L D T++DLK+YF +FGEV L + TG+ RGFGFV + + + VDK +
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157
Query: 161 GTHLVKGKKVDVK--KALSKEEMAK 183
H + GK +D K KA+ +E K
Sbjct: 158 KEHKLNGKVIDPKRAKAMKTKEPVK 182
Score = 127 (49.8 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 28/93 (30%), Positives = 48/93 (51%)
Query: 2 TKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAH 61
TKEP ++K+F+GGL T E ++ +F +G+V + + D +T K RGF FIT+
Sbjct: 177 TKEP--VKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEE 234
Query: 62 MVDDAQAARPHTIDSKVVEPKRAVPRTEINRPE 94
V + H + E K A+ + + + +
Sbjct: 235 PVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQ 267
>UNIPROTKB|A6H6Y0 [details] [associations]
symbol:HNRNPD "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043488 "regulation of mRNA stability" evidence=IEA]
[GO:0042162 "telomeric DNA binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0030529 GO:GO:0043488 GO:GO:0042162 HOGENOM:HOG000234441
HOVERGEN:HBG002295 GeneTree:ENSGT00700000104347 OrthoDB:EOG49W2FZ
OMA:PNQNWNQ InterPro:IPR012956 Pfam:PF08143 EMBL:DAAA02018245
UniGene:Bt.52882 EMBL:BC146038 IPI:IPI00696935 SMR:A6H6Y0
STRING:A6H6Y0 Ensembl:ENSBTAT00000018540 InParanoid:A6H6Y0
Uniprot:A6H6Y0
Length = 355
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 71/171 (41%), Positives = 104/171 (60%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+FIGGL + T+ + LK +F +G+VVD + DP T +SRGFGF+ + + VD
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
+ H ++ KV++PKRA + P VKK+FVG L D EE ++EYFG FGEV S+
Sbjct: 158 KEHKLNGKVIDPKRA-KAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 211
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEE 180
L + +T K+RGF F+ + + +PV K K H V K ++K A+SKE+
Sbjct: 212 ELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQ 262
Score = 174 (66.3 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 36/85 (42%), Positives = 52/85 (61%)
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLK 160
K+F+G L D T++DLK+YF +FGEV L + TG+ RGFGFV + + + VDK +
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157
Query: 161 GTHLVKGKKVDVK--KALSKEEMAK 183
H + GK +D K KA+ +E K
Sbjct: 158 KEHKLNGKVIDPKRAKAMKTKEPVK 182
Score = 127 (49.8 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 28/93 (30%), Positives = 48/93 (51%)
Query: 2 TKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAH 61
TKEP ++K+F+GGL T E ++ +F +G+V + + D +T K RGF FIT+
Sbjct: 177 TKEP--VKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEE 234
Query: 62 MVDDAQAARPHTIDSKVVEPKRAVPRTEINRPE 94
V + H + E K A+ + + + +
Sbjct: 235 PVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQ 267
>UNIPROTKB|E2RIX2 [details] [associations]
symbol:HNRNPD "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043488 "regulation of mRNA stability"
evidence=IEA] [GO:0042162 "telomeric DNA binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0030529 GO:GO:0043488 GO:GO:0042162
GeneTree:ENSGT00700000104347 KO:K13044 CTD:3184 OMA:PNQNWNQ
InterPro:IPR012956 Pfam:PF08143 EMBL:AAEX03016719
RefSeq:XP_857957.1 Ensembl:ENSCAFT00000038801 GeneID:478450
KEGG:cfa:478450 Uniprot:E2RIX2
Length = 355
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 71/171 (41%), Positives = 104/171 (60%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+FIGGL + T+ + LK +F +G+VVD + DP T +SRGFGF+ + + VD
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
+ H ++ KV++PKRA + P VKK+FVG L D EE ++EYFG FGEV S+
Sbjct: 158 KEHKLNGKVIDPKRA-KAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 211
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEE 180
L + +T K+RGF F+ + + +PV K K H V K ++K A+SKE+
Sbjct: 212 ELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQ 262
Score = 174 (66.3 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 36/85 (42%), Positives = 52/85 (61%)
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLK 160
K+F+G L D T++DLK+YF +FGEV L + TG+ RGFGFV + + + VDK +
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157
Query: 161 GTHLVKGKKVDVK--KALSKEEMAK 183
H + GK +D K KA+ +E K
Sbjct: 158 KEHKLNGKVIDPKRAKAMKTKEPVK 182
Score = 127 (49.8 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 28/93 (30%), Positives = 48/93 (51%)
Query: 2 TKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAH 61
TKEP ++K+F+GGL T E ++ +F +G+V + + D +T K RGF FIT+
Sbjct: 177 TKEP--VKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEE 234
Query: 62 MVDDAQAARPHTIDSKVVEPKRAVPRTEINRPE 94
V + H + E K A+ + + + +
Sbjct: 235 PVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQ 267
>UNIPROTKB|H0Y8G5 [details] [associations]
symbol:HNRNPD "Heterogeneous nuclear ribonucleoprotein D0"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC124016 HGNC:HGNC:5036
ChiTaRS:HNRNPD Ensembl:ENST00000509263 Bgee:H0Y8G5 Uniprot:H0Y8G5
Length = 261
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 71/171 (41%), Positives = 104/171 (60%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+FIGGL + T+ + LK +F +G+VVD + DP T +SRGFGF+ + + VD
Sbjct: 31 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 90
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
+ H ++ KV++PKRA + P VKK+FVG L D EE ++EYFG FGEV S+
Sbjct: 91 KEHKLNGKVIDPKRA-KAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 144
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEE 180
L + +T K+RGF F+ + + +PV K K H V K ++K A+SKE+
Sbjct: 145 ELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQ 195
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 36/85 (42%), Positives = 52/85 (61%)
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLK 160
K+F+G L D T++DLK+YF +FGEV L + TG+ RGFGFV + + + VDK +
Sbjct: 31 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 90
Query: 161 GTHLVKGKKVDVK--KALSKEEMAK 183
H + GK +D K KA+ +E K
Sbjct: 91 KEHKLNGKVIDPKRAKAMKTKEPVK 115
Score = 127 (49.8 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 28/93 (30%), Positives = 48/93 (51%)
Query: 2 TKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAH 61
TKEP ++K+F+GGL T E ++ +F +G+V + + D +T K RGF FIT+
Sbjct: 110 TKEP--VKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEE 167
Query: 62 MVDDAQAARPHTIDSKVVEPKRAVPRTEINRPE 94
V + H + E K A+ + + + +
Sbjct: 168 PVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQ 200
>UNIPROTKB|H0YA96 [details] [associations]
symbol:HNRNPD "Heterogeneous nuclear ribonucleoprotein D0"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC124016 HGNC:HGNC:5036
ChiTaRS:HNRNPD Ensembl:ENST00000514671 Uniprot:H0YA96
Length = 210
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 71/171 (41%), Positives = 104/171 (60%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+FIGGL + T+ + LK +F +G+VVD + DP T +SRGFGF+ + + VD
Sbjct: 2 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 61
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
+ H ++ KV++PKRA + P VKK+FVG L D EE ++EYFG FGEV S+
Sbjct: 62 KEHKLNGKVIDPKRA-KAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 115
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEE 180
L + +T K+RGF F+ + + +PV K K H V K ++K A+SKE+
Sbjct: 116 ELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQ 166
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 36/85 (42%), Positives = 52/85 (61%)
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLK 160
K+F+G L D T++DLK+YF +FGEV L + TG+ RGFGFV + + + VDK +
Sbjct: 2 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 61
Query: 161 GTHLVKGKKVDVK--KALSKEEMAK 183
H + GK +D K KA+ +E K
Sbjct: 62 KEHKLNGKVIDPKRAKAMKTKEPVK 86
Score = 127 (49.8 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 28/93 (30%), Positives = 48/93 (51%)
Query: 2 TKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAH 61
TKEP ++K+F+GGL T E ++ +F +G+V + + D +T K RGF FIT+
Sbjct: 81 TKEP--VKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEE 138
Query: 62 MVDDAQAARPHTIDSKVVEPKRAVPRTEINRPE 94
V + H + E K A+ + + + +
Sbjct: 139 PVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQ 171
>UNIPROTKB|Q14103 [details] [associations]
symbol:HNRNPD "Heterogeneous nuclear ribonucleoprotein D0"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0043488 "regulation of mRNA stability"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IDA;NAS]
[GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0042162 "telomeric DNA binding" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA] [GO:0006396
"RNA processing" evidence=TAS] [GO:0006401 "RNA catabolic process"
evidence=TAS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005730 "nucleolus" evidence=IDA] Reactome:REACT_71
Reactome:REACT_21257 InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 EMBL:AF026126
GO:GO:0005829 GO:GO:0045893 GO:GO:0005654 GO:GO:0000166
Reactome:REACT_1675 Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723
GO:GO:0006401 GO:GO:0048255 GO:GO:0030529 EMBL:CH471057
GO:GO:0000398 GO:GO:0042162 eggNOG:COG0724 HOVERGEN:HBG002295
KO:K13044 EMBL:AC124016 OrthoDB:EOG49W2FZ EMBL:D55671 EMBL:D55672
EMBL:D55673 EMBL:D55674 EMBL:AK292707 EMBL:BC002401 EMBL:BC023977
EMBL:BC026015 EMBL:X03910 EMBL:AF039575 EMBL:M94630 IPI:IPI00028888
IPI:IPI00220683 IPI:IPI00220684 IPI:IPI00220685 PIR:A24016
PIR:A44192 PIR:B48138 RefSeq:NP_001003810.1 RefSeq:NP_002129.2
RefSeq:NP_112737.1 RefSeq:NP_112738.1 UniGene:Hs.480073 PDB:1HD0
PDB:1HD1 PDB:1IQT PDB:1WTB PDB:1X0F PDB:2Z5N PDBsum:1HD0
PDBsum:1HD1 PDBsum:1IQT PDBsum:1WTB PDBsum:1X0F PDBsum:2Z5N
ProteinModelPortal:Q14103 SMR:Q14103 IntAct:Q14103
MINT:MINT-5001251 STRING:Q14103 PhosphoSite:Q14103 DMDM:13124489
SWISS-2DPAGE:Q14103 PaxDb:Q14103 PRIDE:Q14103 DNASU:3184
Ensembl:ENST00000313899 Ensembl:ENST00000352301
Ensembl:ENST00000353341 GeneID:3184 KEGG:hsa:3184 UCSC:uc003hmm.1
UCSC:uc003hmn.1 UCSC:uc003hmo.1 UCSC:uc003hmp.1 CTD:3184
GeneCards:GC04M083274 HGNC:HGNC:5036 HPA:HPA004911 MIM:601324
neXtProt:NX_Q14103 PharmGKB:PA29361 InParanoid:Q14103 OMA:PNQNWNQ
PhylomeDB:Q14103 ChiTaRS:HNRNPD EvolutionaryTrace:Q14103
GenomeRNAi:3184 NextBio:12644 PMAP-CutDB:Q14103 ArrayExpress:Q14103
Bgee:Q14103 Genevestigator:Q14103 GermOnline:ENSG00000138668
InterPro:IPR012956 Pfam:PF08143 Uniprot:Q14103
Length = 355
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 71/171 (41%), Positives = 104/171 (60%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+FIGGL + T+ + LK +F +G+VVD + DP T +SRGFGF+ + + VD
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
+ H ++ KV++PKRA + P VKK+FVG L D EE ++EYFG FGEV S+
Sbjct: 158 KEHKLNGKVIDPKRA-KAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 211
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEE 180
L + +T K+RGF F+ + + +PV K K H V K ++K A+SKE+
Sbjct: 212 ELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQ 262
Score = 174 (66.3 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 36/85 (42%), Positives = 52/85 (61%)
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLK 160
K+F+G L D T++DLK+YF +FGEV L + TG+ RGFGFV + + + VDK +
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157
Query: 161 GTHLVKGKKVDVK--KALSKEEMAK 183
H + GK +D K KA+ +E K
Sbjct: 158 KEHKLNGKVIDPKRAKAMKTKEPVK 182
Score = 127 (49.8 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 28/93 (30%), Positives = 48/93 (51%)
Query: 2 TKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAH 61
TKEP ++K+F+GGL T E ++ +F +G+V + + D +T K RGF FIT+
Sbjct: 177 TKEP--VKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEE 234
Query: 62 MVDDAQAARPHTIDSKVVEPKRAVPRTEINRPE 94
V + H + E K A+ + + + +
Sbjct: 235 PVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQ 267
>SGD|S000005483 [details] [associations]
symbol:HRP1 "Subunit of cleavage factor I" species:4932
"Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0010494 "cytoplasmic stress granule"
evidence=IDA] [GO:0006378 "mRNA polyadenylation" evidence=IMP;IDA]
[GO:0005849 "mRNA cleavage factor complex" evidence=IPI]
[GO:0006379 "mRNA cleavage" evidence=IDA] [GO:0003729 "mRNA
binding" evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 SGD:S000005483
EMBL:BK006948 GO:GO:0000184 GO:GO:0000166 GO:GO:0003729
Gene3D:3.30.70.330 GO:GO:0006378 GO:GO:0010494 eggNOG:COG0724
GO:GO:0006379 GO:GO:0005849 KO:K14411 GeneTree:ENSGT00700000104255
EMBL:U35737 EMBL:U38535 EMBL:X95258 EMBL:Z74865 PIR:S66820
RefSeq:NP_014518.1 PDB:2CJK PDB:2KM8 PDBsum:2CJK PDBsum:2KM8
ProteinModelPortal:Q99383 SMR:Q99383 DIP:DIP-1371N IntAct:Q99383
MINT:MINT-395353 STRING:Q99383 PaxDb:Q99383 PeptideAtlas:Q99383
EnsemblFungi:YOL123W GeneID:853997 KEGG:sce:YOL123W CYGD:YOL123w
HOGENOM:HOG000248803 OMA:AREEQDK OrthoDB:EOG4TF3VC
EvolutionaryTrace:Q99383 NextBio:975491 Genevestigator:Q99383
GermOnline:YOL123W Uniprot:Q99383
Length = 534
Score = 350 (128.3 bits), Expect = 1.1e-31, P = 1.1e-31
Identities = 65/166 (39%), Positives = 107/166 (64%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+FIGGL++ T+ + L+ +F +G V D+ +MKDP T +SRGFGF+++ VD+
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 219
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
+ H +D KV++PKRA+PR E + + G K+FVG + D+ ++ +E+F Q+G +
Sbjct: 220 Q-HILDGKVIDPKRAIPRDE--QDKTG----KIFVGGIGPDVRPKEFEEFFSQWGTIIDA 272
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKA 175
L+ +K+TG+ RGFGFV Y+ D VD+ C K +K+++K+A
Sbjct: 273 QLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRA 318
Score = 197 (74.4 bits), Expect = 7.8e-15, P = 7.8e-15
Identities = 38/105 (36%), Positives = 68/105 (64%)
Query: 81 PKRAVPRTEINRPEAGATVK--KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETG 138
P++ V +T+ R +A + + K+F+G L D TE++L+EYFG++G VT + ++ + TG
Sbjct: 138 PQQQVTQTKEERSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATG 197
Query: 139 KKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMAK 183
+ RGFGF+ + VD+ +K H++ GK +D K+A+ ++E K
Sbjct: 198 RSRGFGFLSFEKPSSVDEV-VKTQHILDGKVIDPKRAIPRDEQDK 241
Score = 147 (56.8 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 33/86 (38%), Positives = 47/86 (54%)
Query: 4 EPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMV 63
E + K+F+GG+ + + F WG ++D +M D T +SRGFGF+TY SA V
Sbjct: 238 EQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAV 297
Query: 64 DDAQAARPHTIDSK--VVEPKRAVPR 87
D + + ID K +E KRA PR
Sbjct: 298 D--RVCQNKFIDFKDRKIEIKRAEPR 321
>UNIPROTKB|Q9XSY6 [details] [associations]
symbol:Q9XSY6 "HnRNP A/B related protein" species:9685
"Felis catus" [GO:0001837 "epithelial to mesenchymal transition"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=ISS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0005737
GO:GO:0045893 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0001837 HOVERGEN:HBG002295 HSSP:Q14103 InterPro:IPR012956
Pfam:PF08143 EMBL:AF153444 ProteinModelPortal:Q9XSY6 Uniprot:Q9XSY6
Length = 279
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 68/178 (38%), Positives = 107/178 (60%)
Query: 2 TKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAH 61
+K E K+F+GGL + TS + LK +F +G+VVD + P T +S+GFGFI + A
Sbjct: 57 SKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMVPNTGRSKGFGFILFKDAA 116
Query: 62 MVDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFG 121
V+ + H +D +V++PK+A+ + P VKK+FVG L + TEE ++EYFG
Sbjct: 117 SVEKVLDQKEHRLDGRVIDPKKAMAMKK--DP-----VKKIFVGGLNPEATEEKIREYFG 169
Query: 122 QFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKE 179
+FGE+ ++ L + +T K+RGF F+ + + +PV K K H + G K ++K A KE
Sbjct: 170 EFGEIEAIELPMDPKTNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVAQPKE 227
Score = 163 (62.4 bits), Expect = 6.8e-12, P = 6.8e-12
Identities = 34/96 (35%), Positives = 56/96 (58%)
Query: 89 EINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEY 148
+IN + K+FVG L D +++DLK+YF +FGEV + TG+ +GFGF+ +
Sbjct: 53 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMVPNTGRSKGFGFILF 112
Query: 149 NDYDPVDKACLKGTHLVKGKKVDVKKALS-KEEMAK 183
D V+K + H + G+ +D KKA++ K++ K
Sbjct: 113 KDAASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVK 148
Score = 137 (53.3 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 29/95 (30%), Positives = 51/95 (53%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
K+P ++K+F+GGL+ + E ++ +F +G++ + + DP+T K RGF FIT+
Sbjct: 144 KDP--VKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEEP 201
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGA 97
V + HTI E K A P+ + + G+
Sbjct: 202 VKKVLEKKFHTISGSKCEIKVAQPKEVYQQQQYGS 236
>RGD|1564416 [details] [associations]
symbol:RGD1564416 "similar to Heterogeneous nuclear
ribonucleoprotein A1 (Helix-destabilizing protein
(Topoisomerase-inhibitor suppressed)" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:1564416 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
IPI:IPI00388666 Ensembl:ENSRNOT00000037037 Uniprot:F1LZ88
Length = 314
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 73/181 (40%), Positives = 111/181 (61%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
+E R I GL + T+ E+LK+ E + + +VM+DP TK+SRGFGF+ Y++
Sbjct: 8 REKGRERVYLIRGLSFETTDESLKT-ME---NTSNFLVMRDPNTKRSRGFGFVPYTTVEE 63
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEIN-RPEAGATVKKLFVGSLRDDITEEDLKEYFG 121
VD ARPH + +VV PKR E + RP A T+KK+ VG + +D E L++YF
Sbjct: 64 VDATMNARPHKVGGRVVGPKRVSCGMEKSQRPGAPLTMKKVLVGGINEDTEEHHLRDYFE 123
Query: 122 QFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEM 181
+G+ + ++T++ + KKRGF FV ++D+D VDK ++ H V G +V+KALSK+E
Sbjct: 124 WYGKTEVIEIMTDRGSVKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQER 183
Query: 182 A 182
A
Sbjct: 184 A 184
>UNIPROTKB|K7EQ02 [details] [associations]
symbol:DAZAP1 "DAZ-associated protein 1" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
Gene3D:3.30.70.330 HGNC:HGNC:2683 EMBL:AC005329 EMBL:AC027307
Ensembl:ENST00000592453 Uniprot:K7EQ02
Length = 225
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 69/178 (38%), Positives = 111/178 (62%)
Query: 6 EHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDD 65
+ + KLF+GGLD+ T+ ETL+S+F +G+VVD V+MKD T +SRGFGF+ + + V
Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66
Query: 66 AQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGE 125
A+RPHT+D + + PR++ ++ K+FVG + + E +L+EYF +FG
Sbjct: 67 VLASRPHTLDGR----NQKGPRSDNSKSN------KIFVGGIPHNCGETELREYFKKFGV 116
Query: 126 VTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMAK 183
VT V ++ + E + RGFGF+ + D VD+A H + GKKV+VK+A ++ ++
Sbjct: 117 VTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQ 174
>UNIPROTKB|F1NIB2 [details] [associations]
symbol:HNRNPAB "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529
GeneTree:ENSGT00700000104347 OMA:FILFKDP EMBL:AADN02028501
EMBL:AADN02028502 EMBL:AADN02028503 IPI:IPI00574172
Ensembl:ENSGALT00000023234 ArrayExpress:F1NIB2 Uniprot:F1NIB2
Length = 263
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 67/170 (39%), Positives = 103/170 (60%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+F+GGL + TS + LK +F +G+V D + DP T +SRGFGFI + V+
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQ 60
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
+ H +D ++++PK+A+ + P VKK+FVG L + TEE ++EYFG+FGE+ ++
Sbjct: 61 KEHRLDGRLIDPKKAMAMKK--DP-----VKKIFVGGLNPEATEEKIREYFGEFGEIEAI 113
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKE 179
L + +T K+RGF F+ + + DPV K K H V G K ++K A KE
Sbjct: 114 ELPMDPKTNKRRGFVFITFKEEDPVKKVLEKKFHNVSGSKCEIKVAQPKE 163
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 33/84 (39%), Positives = 54/84 (64%)
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLK 160
K+FVG L D +++DLK+YF +FGEVT + + TG+ RGFGF+ + + V+K +
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQ 60
Query: 161 GTHLVKGKKVDVKKALS-KEEMAK 183
H + G+ +D KKA++ K++ K
Sbjct: 61 KEHRLDGRLIDPKKAMAMKKDPVK 84
Score = 127 (49.8 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 26/85 (30%), Positives = 46/85 (54%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
K+P ++K+F+GGL+ + E ++ +F +G++ + + DP+T K RGF FIT+
Sbjct: 80 KDP--VKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEDP 137
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPR 87
V + H + E K A P+
Sbjct: 138 VKKVLEKKFHNVSGSKCEIKVAQPK 162
>UNIPROTKB|F1NIB4 [details] [associations]
symbol:HNRNPAB "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104347 EMBL:AADN02028501 EMBL:AADN02028502
EMBL:AADN02028503 IPI:IPI00603451 ProteinModelPortal:F1NIB4
Ensembl:ENSGALT00000023233 ArrayExpress:F1NIB4 Uniprot:F1NIB4
Length = 212
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 67/170 (39%), Positives = 103/170 (60%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+F+GGL + TS + LK +F +G+V D + DP T +SRGFGFI + V+
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQ 60
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
+ H +D ++++PK+A+ + P VKK+FVG L + TEE ++EYFG+FGE+ ++
Sbjct: 61 KEHRLDGRLIDPKKAMAMKK--DP-----VKKIFVGGLNPEATEEKIREYFGEFGEIEAI 113
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKE 179
L + +T K+RGF F+ + + DPV K K H V G K ++K A KE
Sbjct: 114 ELPMDPKTNKRRGFVFITFKEEDPVKKVLEKKFHNVSGSKCEIKVAQPKE 163
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 33/84 (39%), Positives = 54/84 (64%)
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLK 160
K+FVG L D +++DLK+YF +FGEVT + + TG+ RGFGF+ + + V+K +
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQ 60
Query: 161 GTHLVKGKKVDVKKALS-KEEMAK 183
H + G+ +D KKA++ K++ K
Sbjct: 61 KEHRLDGRLIDPKKAMAMKKDPVK 84
Score = 127 (49.8 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 26/85 (30%), Positives = 46/85 (54%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
K+P ++K+F+GGL+ + E ++ +F +G++ + + DP+T K RGF FIT+
Sbjct: 80 KDP--VKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEDP 137
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPR 87
V + H + E K A P+
Sbjct: 138 VKKVLEKKFHNVSGSKCEIKVAQPK 162
>ZFIN|ZDB-GENE-070212-1 [details] [associations]
symbol:dazap1 "DAZ associated protein 1" species:7955
"Danio rerio" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-070212-1 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 OMA:HNLDGRN GeneTree:ENSGT00700000104255
EMBL:BX255969 EMBL:BX323045 IPI:IPI00961610
Ensembl:ENSDART00000104362 Bgee:F1QBG2 Uniprot:F1QBG2
Length = 407
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 71/188 (37%), Positives = 110/188 (58%)
Query: 6 EHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDD 65
+ + KLF+GGLD+ T+ ETL+++F +G+VVD V+MKD T +SRGFGF+ + + V
Sbjct: 8 DEIGKLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRGFGFVKFKDPNCVRT 67
Query: 66 AQAARPHTIDSKVVEPKRAVPR---TEINRPEAG--------ATVKKLFVGSLRDDITEE 114
+PH +D + ++PK PR E R + G KK+FVG + + E
Sbjct: 68 VLDTKPHNLDGRNIDPKPCTPRGMQPEKTRTKDGWKGSKSDSNKSKKIFVGGIPHNCGEA 127
Query: 115 DLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKK 174
+L++YF +FG VT V ++ + E + RGFGF+ + VD+A H + GKKV+VKK
Sbjct: 128 ELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKK 187
Query: 175 ALSKEEMA 182
A ++ A
Sbjct: 188 AEPRDSKA 195
Score = 156 (60.0 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 36/98 (36%), Positives = 52/98 (53%)
Query: 90 INRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYN 149
+N AG + KLFVG L T+E L+ YF Q+GEV ++ +K T + RGFGFV++
Sbjct: 1 MNSNLAGDEIGKLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRGFGFVKFK 60
Query: 150 DYDPVDKACLKGTHLVKGKKVDVKKALSKEEMAKLKTR 187
D + V H + G+ +D K + M KTR
Sbjct: 61 DPNCVRTVLDTKPHNLDGRNIDPKPCTPRG-MQPEKTR 97
>UNIPROTKB|Q5ZIH1 [details] [associations]
symbol:HNRNPD "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0042162 "telomeric DNA binding"
evidence=IEA] [GO:0043488 "regulation of mRNA stability"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0030529 GO:GO:0043488 GO:GO:0042162
eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295
UniGene:Gga.4605 GeneTree:ENSGT00700000104347 KO:K13044
OrthoDB:EOG49W2FZ CTD:3184 OMA:PNQNWNQ EMBL:AADN02009040
EMBL:AJ720813 IPI:IPI00597667 RefSeq:NP_001026314.1 SMR:Q5ZIH1
STRING:Q5ZIH1 Ensembl:ENSGALT00000018234 GeneID:422602
KEGG:gga:422602 InParanoid:Q5ZIH1 NextBio:20825212 Uniprot:Q5ZIH1
Length = 257
Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 70/170 (41%), Positives = 103/170 (60%)
Query: 11 LFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAAR 70
+FIGGL + T+ + LK +F +G+VVD + DP T +SRGFGF+ + + VD +
Sbjct: 1 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQK 60
Query: 71 PHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVA 130
H ++ KV++PKRA + P VKK+FVG L D EE ++EYFG FGEV S+
Sbjct: 61 EHKLNGKVIDPKRA-KAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGAFGEVESIE 114
Query: 131 LVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEE 180
L + +T K+RGF F+ + + +PV K K H V K ++K A+SKE+
Sbjct: 115 LPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQ 164
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 35/84 (41%), Positives = 51/84 (60%)
Query: 102 LFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKG 161
+F+G L D T++DLK+YF +FGEV L + TG+ RGFGFV + + + VDK +
Sbjct: 1 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQK 60
Query: 162 THLVKGKKVDVK--KALSKEEMAK 183
H + GK +D K KA+ +E K
Sbjct: 61 EHKLNGKVIDPKRAKAMKTKEPVK 84
Score = 135 (52.6 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 33/107 (30%), Positives = 55/107 (51%)
Query: 2 TKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAH 61
TKEP ++K+F+GGL T E ++ +F A+G+V + + D +T K RGF FIT+
Sbjct: 79 TKEP--VKKIFVGGLSPDTPEEKIREYFGAFGEVESIELPMDNKTNKRRGFCFITFKEEE 136
Query: 62 MVDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLR 108
V + H + E K A+ + + + + + + FVG R
Sbjct: 137 PVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGS-RGGFVGRAR 182
>UNIPROTKB|Q99729 [details] [associations]
symbol:HNRNPAB "Heterogeneous nuclear ribonucleoprotein
A/B" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0003723 "RNA binding" evidence=TAS] [GO:0003729 "mRNA binding"
evidence=TAS] [GO:0001837 "epithelial to mesenchymal transition"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS;IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0005737 GO:GO:0045893 GO:GO:0000166
GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0030529 GO:GO:0001837
EMBL:CH471165 eggNOG:COG0724 HOGENOM:HOG000234441
HOVERGEN:HBG002295 KO:K13044 InterPro:IPR012956 Pfam:PF08143
EMBL:M65028 EMBL:U76713 EMBL:AK054600 EMBL:AK097657 EMBL:BC001616
EMBL:BC002625 EMBL:BC004561 EMBL:BC009359 EMBL:BC036708
IPI:IPI00106509 IPI:IPI00329355 IPI:IPI00334587 IPI:IPI00334713
PIR:S17563 RefSeq:NP_004490.2 RefSeq:NP_112556.2 UniGene:Hs.591731
UniGene:Hs.715055 PDB:3S7R PDBsum:3S7R ProteinModelPortal:Q99729
SMR:Q99729 IntAct:Q99729 MINT:MINT-4537784 STRING:Q99729
PhosphoSite:Q99729 DMDM:158523286 SWISS-2DPAGE:Q99729 PaxDb:Q99729
PRIDE:Q99729 Ensembl:ENST00000355836 Ensembl:ENST00000358344
Ensembl:ENST00000504898 Ensembl:ENST00000506259 GeneID:3182
KEGG:hsa:3182 UCSC:uc003miu.3 UCSC:uc003miv.3 CTD:3182
GeneCards:GC05P177631 HGNC:HGNC:5034 HPA:HPA046688 MIM:602688
neXtProt:NX_Q99729 PharmGKB:PA162391196 InParanoid:Q99729
OMA:FILFKDP OrthoDB:EOG42BX9K ChiTaRS:HNRNPAB
EvolutionaryTrace:Q99729 GenomeRNAi:3182 NextBio:12628
ArrayExpress:Q99729 Bgee:Q99729 CleanEx:HS_HNRNPAB
Genevestigator:Q99729 GermOnline:ENSG00000197451 Uniprot:Q99729
Length = 332
Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 70/179 (39%), Positives = 107/179 (59%)
Query: 2 TKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAH 61
+K E K+F+GGL + TS + LK +F +G+VVD + DP T +SRGFGFI + A
Sbjct: 62 SKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAA 121
Query: 62 MVDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDI-TEEDLKEYF 120
V+ + H +D +V++PK+A+ + P VKK+FVG L + TEE ++EYF
Sbjct: 122 SVEKVLDQKEHRLDGRVIDPKKAMAMKK--DP-----VKKIFVGGLNPESPTEEKIREYF 174
Query: 121 GQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKE 179
G+FGE+ ++ L + + K+RGF F+ + + +PV K K H V G K ++K A KE
Sbjct: 175 GEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPKE 233
Score = 170 (64.9 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 35/96 (36%), Positives = 57/96 (59%)
Query: 89 EINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEY 148
+IN + K+FVG L D +++DLK+YF +FGEV + + TG+ RGFGF+ +
Sbjct: 58 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF 117
Query: 149 NDYDPVDKACLKGTHLVKGKKVDVKKALS-KEEMAK 183
D V+K + H + G+ +D KKA++ K++ K
Sbjct: 118 KDAASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVK 153
Score = 122 (48.0 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 27/96 (28%), Positives = 51/96 (53%)
Query: 3 KEPEHLRKLFIGGLDYRT-SSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAH 61
K+P ++K+F+GGL+ + + E ++ +F +G++ + + DP+ K RGF FIT+
Sbjct: 149 KDP--VKKIFVGGLNPESPTEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEE 206
Query: 62 MVDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGA 97
V + HT+ E K A P+ + + G+
Sbjct: 207 PVKKVLEKKFHTVSGSKCEIKVAQPKEVYQQQQYGS 242
>ZFIN|ZDB-GENE-070424-97 [details] [associations]
symbol:hnrnpd "heterogeneous nuclear
ribonucleoprotein D" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-070424-97 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00700000104347
OMA:PNQNWNQ InterPro:IPR012956 Pfam:PF08143 EMBL:CR847788
IPI:IPI00512852 Ensembl:ENSDART00000101414
Ensembl:ENSDART00000123048 Uniprot:F1Q8A5
Length = 314
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 70/179 (39%), Positives = 106/179 (59%)
Query: 2 TKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAH 61
+K E K+F+GGL + T+ + LK +F +G+VVD + DP T +SRGFGF+ + A
Sbjct: 47 SKNEEDEGKMFVGGLSWDTTKKDLKDYFTKFGEVVDCTLKLDPLTGRSRGFGFVLFKEAE 106
Query: 62 MVDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFG 121
V+ + H ++ KV++PK+A + P VKK+FVG L D EE ++EYF
Sbjct: 107 SVEKVITQKEHKLNGKVIDPKKA-KAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFD 160
Query: 122 QFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEE 180
+GEV S+ L E +T K+RGF F+ + + +PV K K H + K +VK A+SKE+
Sbjct: 161 AYGEVESIELPMENKTNKRRGFCFITFKEEEPVKKIMEKKYHNIGLSKCEVKVAMSKEQ 219
Score = 175 (66.7 bits), Expect = 4.8e-13, P = 4.8e-13
Identities = 37/87 (42%), Positives = 54/87 (62%)
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLK 160
K+FVG L D T++DLK+YF +FGEV L + TG+ RGFGFV + + + V+K +
Sbjct: 55 KMFVGGLSWDTTKKDLKDYFTKFGEVVDCTLKLDPLTGRSRGFGFVLFKEAESVEKVITQ 114
Query: 161 GTHLVKGKKVDVKKALS---KEEMAKL 184
H + GK +D KKA + KE + K+
Sbjct: 115 KEHKLNGKVIDPKKAKAMKTKEPVKKI 141
Score = 134 (52.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 29/93 (31%), Positives = 50/93 (53%)
Query: 2 TKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAH 61
TKEP ++K+F+GGL T E ++ +F+A+G+V + + + +T K RGF FIT+
Sbjct: 134 TKEP--VKKIFVGGLSPDTPEEKIREYFDAYGEVESIELPMENKTNKRRGFCFITFKEEE 191
Query: 62 MVDDAQAARPHTIDSKVVEPKRAVPRTEINRPE 94
V + H I E K A+ + + + +
Sbjct: 192 PVKKIMEKKYHNIGLSKCEVKVAMSKEQYQQQQ 224
>FB|FBgn0004838 [details] [associations]
symbol:Hrb27C "Heterogeneous nuclear ribonucleoprotein at
27C" species:7227 "Drosophila melanogaster" [GO:0030529
"ribonucleoprotein complex" evidence=ISS;NAS;IDA;IPI] [GO:0005730
"nucleolus" evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006397 "mRNA processing"
evidence=ISS] [GO:0003729 "mRNA binding" evidence=ISS;NAS]
[GO:0048027 "mRNA 5'-UTR binding" evidence=NAS;TAS] [GO:0007319
"negative regulation of oskar mRNA translation" evidence=TAS]
[GO:0003730 "mRNA 3'-UTR binding" evidence=IDA;TAS] [GO:0007317
"regulation of pole plasm oskar mRNA localization" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0045451 "pole
plasm oskar mRNA localization" evidence=IMP] [GO:0048024
"regulation of mRNA splicing, via spliceosome" evidence=IMP]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0045727 "positive regulation of translation" evidence=IDA]
[GO:0043234 "protein complex" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0007411 "axon guidance" evidence=IMP]
[GO:0046331 "lateral inhibition" evidence=IMP] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005737 GO:GO:0007411 GO:GO:0043234 GO:GO:0005654
EMBL:AE014134 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0007298
GO:GO:0048027 GO:GO:0003730 GO:GO:0003697 GO:GO:0030529
GO:GO:0046331 GO:GO:0045727 GO:GO:0048024 GO:GO:0007319
eggNOG:COG0724 GO:GO:0045451 KO:K14411 GeneTree:ENSGT00700000104255
EMBL:X62639 EMBL:DQ062784 EMBL:AY069699 EMBL:AY128430 EMBL:S51720
PIR:D41732 RefSeq:NP_001162897.1 RefSeq:NP_001162898.1
RefSeq:NP_001245917.1 RefSeq:NP_001245918.1 RefSeq:NP_001245919.1
RefSeq:NP_476869.1 RefSeq:NP_723228.1 RefSeq:NP_723229.1
UniGene:Dm.1997 ProteinModelPortal:P48809 SMR:P48809 IntAct:P48809
MINT:MINT-939547 STRING:P48809 PaxDb:P48809
EnsemblMetazoa:FBtr0079346 EnsemblMetazoa:FBtr0079347
EnsemblMetazoa:FBtr0079348 EnsemblMetazoa:FBtr0301403
EnsemblMetazoa:FBtr0301404 EnsemblMetazoa:FBtr0307030
EnsemblMetazoa:FBtr0307031 EnsemblMetazoa:FBtr0307032 GeneID:33968
KEGG:dme:Dmel_CG10377 CTD:33968 FlyBase:FBgn0004838
InParanoid:P48809 OMA:GGYDMYN OrthoDB:EOG4CJSZQ PhylomeDB:P48809
ChiTaRS:Hrb27C GenomeRNAi:33968 NextBio:786189 Bgee:P48809
GermOnline:CG10377 Uniprot:P48809
Length = 421
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 64/172 (37%), Positives = 109/172 (63%)
Query: 4 EPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMV 63
E + KLF+GGL + T+ E L +F +GD++D VVMK+ ++ +SRGFGF+T++ V
Sbjct: 2 EEDERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNV 61
Query: 64 DDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQF 123
+ PHT+D + ++PK PRT + +P+ G K +F+G L ++TE DL+ +F ++
Sbjct: 62 NHVLQNGPHTLDGRTIDPKPCNPRT-LQKPKKGGGYK-VFLGGLPSNVTETDLRTFFNRY 119
Query: 124 GEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKA 175
G+VT V ++ ++E K RGFGF+ + + V+ + + GK+V++KKA
Sbjct: 120 GKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKA 171
Score = 149 (57.5 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 30/78 (38%), Positives = 46/78 (58%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+F+GGL + L++ F +G V +VV+M D + KKSRGFGF+++ V+
Sbjct: 97 KVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE 156
Query: 70 RPHTIDSKVVEPKRAVPR 87
R ++ K VE K+A PR
Sbjct: 157 RYINLNGKQVEIKKAEPR 174
>TAIR|locus:2173967 [details] [associations]
symbol:AT5G55550 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002688 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
KO:K14411 HSSP:Q61474 ProtClustDB:CLSN2689626 EMBL:AY050796
EMBL:AY096460 IPI:IPI00543007 RefSeq:NP_568826.1 RefSeq:NP_974937.1
UniGene:At.6910 ProteinModelPortal:Q949Z3 SMR:Q949Z3 PRIDE:Q949Z3
EnsemblPlants:AT5G55550.2 EnsemblPlants:AT5G55550.3 GeneID:835649
KEGG:ath:AT5G55550 TAIR:At5g55550 InParanoid:Q949Z3 OMA:VSERVIM
PhylomeDB:Q949Z3 Genevestigator:Q949Z3 Uniprot:Q949Z3
Length = 460
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 74/186 (39%), Positives = 107/186 (57%)
Query: 8 LRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQ 67
L KLFIGG+ + T E L+ +F +GDVV+ V+M+D T ++RGFGFI ++ V +
Sbjct: 5 LGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADP-CVSERV 63
Query: 68 AARPHTIDSKVVEPKRAVPRTE---INRPEA-----------GATVKKLFVGSLRDDITE 113
H ID + VE K+AVPR + + R + G KK+FVG L ITE
Sbjct: 64 IMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRTKKIFVGGLPSSITE 123
Query: 114 EDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVK 173
E+ K YF QFG + V ++ + T + RGFGF+ ++ D VD+ K H + GK V+VK
Sbjct: 124 EEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNGKLVEVK 183
Query: 174 KALSKE 179
+A+ KE
Sbjct: 184 RAVPKE 189
Score = 163 (62.4 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 30/86 (34%), Positives = 53/86 (61%)
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDP-VDKACL 159
KLF+G + D EE L++YF +G+V ++ ++ TG+ RGFGF+ + D P V + +
Sbjct: 7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFAD--PCVSERVI 64
Query: 160 KGTHLVKGKKVDVKKALSKEEMAKLK 185
H++ G+ V+ KKA+ +++ LK
Sbjct: 65 MDKHIIDGRTVEAKKAVPRDDQQVLK 90
>UNIPROTKB|F1MZQ6 [details] [associations]
symbol:F1MZQ6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00550000074566 EMBL:DAAA02073436 IPI:IPI00689139
Ensembl:ENSBTAT00000030499 Uniprot:F1MZQ6
Length = 284
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 74/176 (42%), Positives = 108/176 (61%)
Query: 11 LFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAAR 70
LF+ GL + T++E S+ E + VM+DP TK SR FGF+TY++ VD +AR
Sbjct: 1 LFMEGLSFETTNE---SNNEECSQTM--WVMRDPNTKCSRSFGFVTYATVEEVDATMSAR 55
Query: 71 PHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVA 130
P +D +VVEPKRAV + R +A TVKK+F G ++D E L++YF Q+G+ T
Sbjct: 56 PLKVD-RVVEPKRAVSGEDSQRLDAHLTVKKIFAGDNKEDAEEHHLRDYFEQYGK-TGDQ 113
Query: 131 LVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMAKLKT 186
+ +G+KRGF FV +D+D +DK ++ H V G DV+K LSK+EMA + +
Sbjct: 114 NQNHQGSGQKRGFAFVVSDDHDSIDKTVIQKNHTVNGHNCDVRKTLSKQEMASVSS 169
>ASPGD|ASPL0000063757 [details] [associations]
symbol:AN10941 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0030529 EMBL:BN001304 ProteinModelPortal:C8VBB9
EnsemblFungi:CADANIAT00000536 HOGENOM:HOG000162494 OMA:MNPAMMQ
Uniprot:C8VBB9
Length = 559
Score = 339 (124.4 bits), Expect = 2.6e-30, P = 2.6e-30
Identities = 65/166 (39%), Positives = 105/166 (63%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+FIGGL++ T+ ++LK +F +G+V + VM+D T +SRGFGF+T+ V+
Sbjct: 111 KMFIGGLNWETTDQSLKEYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMV- 169
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
+ H +D K+++PKRA+PR E + K+FVG + + TE+D K++F QFG V
Sbjct: 170 KEHYLDGKIIDPKRAIPRDEQEK------TSKIFVGGVSQEATEQDFKQFFMQFGRVIDA 223
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKA 175
L+ +K+TG+ RGFGFV ++ V+ A + ++ GK ++VKKA
Sbjct: 224 TLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLEIL-GKTIEVKKA 268
Score = 181 (68.8 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 37/98 (37%), Positives = 58/98 (59%)
Query: 90 INRPEA-GATVK---KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGF 145
+ PE G +K K+F+G L + T++ LKEYF QFGEV ++ + TG+ RGFGF
Sbjct: 96 VGEPEPQGTGIKEDGKMFIGGLNWETTDQSLKEYFSQFGEVQECTVMRDSATGRSRGFGF 155
Query: 146 VEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMAK 183
+ + D V+ +K H + GK +D K+A+ ++E K
Sbjct: 156 LTFKDPKTVNTVMVK-EHYLDGKIIDPKRAIPRDEQEK 192
Score = 153 (58.9 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 32/84 (38%), Positives = 47/84 (55%)
Query: 4 EPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMV 63
E E K+F+GG+ + + K F +G V+D +M D T + RGFGF+T+ S V
Sbjct: 189 EQEKTSKIFVGGVSQEATEQDFKQFFMQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAV 248
Query: 64 DDAQAARPHTIDSKVVEPKRAVPR 87
+ A +RP I K +E K+A PR
Sbjct: 249 E-AALSRPLEILGKTIEVKKAQPR 271
>UNIPROTKB|F8VYN5 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0000380 EMBL:AC078778 HGNC:HGNC:5031
ChiTaRS:HNRNPA1 IPI:IPI00644968 ProteinModelPortal:F8VYN5
SMR:F8VYN5 PRIDE:F8VYN5 Ensembl:ENST00000550994 ArrayExpress:F8VYN5
Bgee:F8VYN5 Uniprot:F8VYN5
Length = 113
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 58/112 (51%), Positives = 84/112 (75%)
Query: 41 MKDPQTKKSRGFGFITYSSAHMVDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVK 100
M+DP TK+SRGFGF+TY++ VD A ARPH +D +VVEPKRAV R + RP A TVK
Sbjct: 1 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVK 60
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
K+FVG +++D E L++YF Q+G++ + ++T++ +GKKRGF FV ++D+D
Sbjct: 61 KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHD 112
Score = 102 (41.0 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 8 LRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITY 57
++K+F+GG+ T L+ +FE +G + + +M D + K RGF F+T+
Sbjct: 59 VKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTF 108
Score = 91 (37.1 bits), Expect = 0.00033, P = 0.00033
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 134 EKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEE 180
+ T + RGFGFV Y + VD A H V G+ V+ K+A+S+E+
Sbjct: 3 DPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSRED 49
>UNIPROTKB|F1LRH1 [details] [associations]
symbol:Msi1 "RNA-binding protein Musashi homolog 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005844 "polysome" evidence=IEA]
[GO:0008266 "poly(U) RNA binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:628778 GO:GO:0005634 GO:GO:0005737 GO:GO:0008266 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0005844 GeneTree:ENSGT00700000104255
IPI:IPI00202463 Ensembl:ENSRNOT00000001532 ArrayExpress:F1LRH1
Uniprot:F1LRH1
Length = 329
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 69/160 (43%), Positives = 96/160 (60%)
Query: 23 ETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAARPHTIDSKVVEPK 82
E L+ +F +G+V + +VM+DP TK+SRGFGF+T+ VD A H +DSK ++PK
Sbjct: 1 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPK 60
Query: 83 RAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRG 142
A PR +P+ KK+FVG L + T ED+K YF QFG+V L+ +K T + RG
Sbjct: 61 VAFPRRA--QPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRG 118
Query: 143 FGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
FGFV + D V+K C H + K V+ KKA KE M+
Sbjct: 119 FGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMS 158
Score = 173 (66.0 bits), Expect = 9.7e-13, P = 9.7e-13
Identities = 35/89 (39%), Positives = 55/89 (61%)
Query: 9 RKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQA 68
+K+F+GGL T+ E +K +FE +G V D ++M D T + RGFGF+T+ S +V+
Sbjct: 76 KKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 135
Query: 69 ARPHTIDSKVVEPKRAVPRTEINRPEAGA 97
H I++K+VE K+A P+ E+ P A
Sbjct: 136 IHFHEINNKMVECKKAQPK-EVMSPTGSA 163
Score = 145 (56.1 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 30/74 (40%), Positives = 41/74 (55%)
Query: 114 EDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVK 173
E L+EYFGQFGEV ++ + T + RGFGFV + D VDK + H + K +D K
Sbjct: 1 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPK 60
Query: 174 KALSKEEMAKLKTR 187
A + K+ TR
Sbjct: 61 VAFPRRAQPKMVTR 74
>UNIPROTKB|F1PA19 [details] [associations]
symbol:HNRNPAB "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104347 EMBL:AAEX03007693 EMBL:AAEX03007694
Ensembl:ENSCAFT00000000377 OMA:GNDSSYG Uniprot:F1PA19
Length = 264
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 63/160 (39%), Positives = 99/160 (61%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+F+GGL + TS + LK +F +G+VVD + DP T +SRGFGFI + A V+
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 60
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
+ H +D +V++PK+A+ + P VKK+FVG L + TEE ++EYFG+FGE+ ++
Sbjct: 61 KEHRLDGRVIDPKKAMAMKK--DP-----VKKIFVGGLNPEATEEKIREYFGEFGEIEAI 113
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKK 169
L + ++ K+RGF F+ + + +PV K K H + G K
Sbjct: 114 ELPMDPKSNKRRGFVFITFKEEEPVKKVLEKKFHTISGSK 153
Score = 167 (63.8 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 33/84 (39%), Positives = 53/84 (63%)
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLK 160
K+FVG L D +++DLK+YF +FGEV + + TG+ RGFGF+ + D V+K +
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 60
Query: 161 GTHLVKGKKVDVKKALS-KEEMAK 183
H + G+ +D KKA++ K++ K
Sbjct: 61 KEHRLDGRVIDPKKAMAMKKDPVK 84
Score = 118 (46.6 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 23/72 (31%), Positives = 42/72 (58%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
K+P ++K+F+GGL+ + E ++ +F +G++ + + DP++ K RGF FIT+
Sbjct: 80 KDP--VKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEP 137
Query: 63 VDDAQAARPHTI 74
V + HTI
Sbjct: 138 VKKVLEKKFHTI 149
>UNIPROTKB|Q7ZYE9 [details] [associations]
symbol:hnrnpab "Hnrpab-prov protein" species:8355 "Xenopus
laevis" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
HOVERGEN:HBG002295 HSSP:Q14103 KO:K13044 InterPro:IPR012956
Pfam:PF08143 CTD:3182 EMBL:BC043814 RefSeq:NP_001080489.1
UniGene:Xl.45404 ProteinModelPortal:Q7ZYE9 SMR:Q7ZYE9 IntAct:Q7ZYE9
GeneID:380181 KEGG:xla:380181 Xenbase:XB-GENE-6043063
Uniprot:Q7ZYE9
Length = 324
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 65/170 (38%), Positives = 101/170 (59%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+F+GGL + TS + LK +F +G+V D + DP T +SRGFGFI + A VD
Sbjct: 65 KMFVGGLSWDTSKKDLKDYFAKFGEVSDCTIKMDPNTGRSRGFGFILFKDAESVDKVLEH 124
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
+ H +D ++++PK+A+ + P +KK+FVG L + E+ ++EYF FGE+ ++
Sbjct: 125 KEHRLDGRLIDPKKAMAMKK--DP-----IKKIFVGGLNPEAGEDQIREYFETFGEIEAI 177
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKE 179
L + +T K+RGF F+ + + DPV K K H V G K ++K A KE
Sbjct: 178 ELPMDPKTNKRRGFVFITFKEEDPVKKILEKKFHNVSGSKCEIKIAQPKE 227
Score = 177 (67.4 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 34/86 (39%), Positives = 55/86 (63%)
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLK 160
K+FVG L D +++DLK+YF +FGEV+ + + TG+ RGFGF+ + D + VDK
Sbjct: 65 KMFVGGLSWDTSKKDLKDYFAKFGEVSDCTIKMDPNTGRSRGFGFILFKDAESVDKVLEH 124
Query: 161 GTHLVKGKKVDVKKALS--KEEMAKL 184
H + G+ +D KKA++ K+ + K+
Sbjct: 125 KEHRLDGRLIDPKKAMAMKKDPIKKI 150
Score = 134 (52.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 28/94 (29%), Positives = 51/94 (54%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
K+P ++K+F+GGL+ + ++ +FE +G++ + + DP+T K RGF FIT+
Sbjct: 144 KDP--IKKIFVGGLNPEAGEDQIREYFETFGEIEAIELPMDPKTNKRRGFVFITFKEEDP 201
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAG 96
V + H + E K A P+ E+ + + G
Sbjct: 202 VKKILEKKFHNVSGSKCEIKIAQPK-EVYQQQYG 234
>RGD|1309950 [details] [associations]
symbol:Hnrpdl "heterogeneous nuclear ribonucleoprotein D-like"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:1309950 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0000166
GO:GO:0003677 Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723
eggNOG:COG0724 HOVERGEN:HBG002295 HSSP:Q14103 CTD:9987 KO:K13044
EMBL:BC104683 IPI:IPI00363719 RefSeq:NP_001028868.1
UniGene:Rn.102146 ProteinModelPortal:Q3SWU3 SMR:Q3SWU3
PhosphoSite:Q3SWU3 PRIDE:Q3SWU3 GeneID:305178 KEGG:rno:305178
NextBio:654187 Genevestigator:Q3SWU3 Uniprot:Q3SWU3
Length = 322
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 68/175 (38%), Positives = 98/175 (56%)
Query: 5 PEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVD 64
P K+FIGGL + TS + L + +G+VVD + DP T +SRGFGF+ + A VD
Sbjct: 47 PTSGNKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVD 106
Query: 65 DAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFG 124
+ H +D K+++PKRA P KK+FVG L D +EE +KEYFG FG
Sbjct: 107 KVLELKEHKLDGKLIDPKRAKALKGKEPP------KKVFVGGLSPDTSEEQIKEYFGAFG 160
Query: 125 EVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKE 179
E+ ++ L + +T ++RGF F+ Y D +PV K H + K ++K A KE
Sbjct: 161 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPKE 215
Score = 146 (56.5 bits), Expect = 9.3e-10, P = 9.3e-10
Identities = 35/92 (38%), Positives = 53/92 (57%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEP +K+F+GGL TS E +K +F A+G++ ++ + D +T + RGF FITY+
Sbjct: 132 KEPP--KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEP 189
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPE 94
V +R H I S E K A P+ E+ R +
Sbjct: 190 VKKLLESRYHQIGSGKCEIKVAQPK-EVYRQQ 220
>UNIPROTKB|Q3SWU3 [details] [associations]
symbol:Hnrpdl "Heterogeneous nuclear ribonucleoprotein
D-like" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:1309950
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0000166
GO:GO:0003677 Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723
eggNOG:COG0724 HOVERGEN:HBG002295 HSSP:Q14103 CTD:9987 KO:K13044
EMBL:BC104683 IPI:IPI00363719 RefSeq:NP_001028868.1
UniGene:Rn.102146 ProteinModelPortal:Q3SWU3 SMR:Q3SWU3
PhosphoSite:Q3SWU3 PRIDE:Q3SWU3 GeneID:305178 KEGG:rno:305178
NextBio:654187 Genevestigator:Q3SWU3 Uniprot:Q3SWU3
Length = 322
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 68/175 (38%), Positives = 98/175 (56%)
Query: 5 PEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVD 64
P K+FIGGL + TS + L + +G+VVD + DP T +SRGFGF+ + A VD
Sbjct: 47 PTSGNKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVD 106
Query: 65 DAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFG 124
+ H +D K+++PKRA P KK+FVG L D +EE +KEYFG FG
Sbjct: 107 KVLELKEHKLDGKLIDPKRAKALKGKEPP------KKVFVGGLSPDTSEEQIKEYFGAFG 160
Query: 125 EVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKE 179
E+ ++ L + +T ++RGF F+ Y D +PV K H + K ++K A KE
Sbjct: 161 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPKE 215
Score = 146 (56.5 bits), Expect = 9.3e-10, P = 9.3e-10
Identities = 35/92 (38%), Positives = 53/92 (57%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEP +K+F+GGL TS E +K +F A+G++ ++ + D +T + RGF FITY+
Sbjct: 132 KEPP--KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEP 189
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPE 94
V +R H I S E K A P+ E+ R +
Sbjct: 190 VKKLLESRYHQIGSGKCEIKVAQPK-EVYRQQ 220
>UNIPROTKB|F1N2T0 [details] [associations]
symbol:HNRPDL "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00700000104347
OMA:QHPPADN EMBL:DAAA02018246 IPI:IPI00697542 UniGene:Bt.23277
PRIDE:F1N2T0 Ensembl:ENSBTAT00000019699 ArrayExpress:F1N2T0
Uniprot:F1N2T0
Length = 420
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 67/170 (39%), Positives = 97/170 (57%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+FIGGL + TS + L + +G+VVD + DP T +SRGFGF+ + A VD
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
+ H +D K+++PKRA P KK+FVG L D +EE +KEYFG FGE+ ++
Sbjct: 209 KEHKLDGKLIDPKRAKALKGKEPP------KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 262
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKE 179
L + +T ++RGF F+ Y D +PV K H + K ++K A KE
Sbjct: 263 ELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPKE 312
Score = 146 (56.5 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 35/92 (38%), Positives = 53/92 (57%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEP +K+F+GGL TS E +K +F A+G++ ++ + D +T + RGF FITY+
Sbjct: 229 KEPP--KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEP 286
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPE 94
V +R H I S E K A P+ E+ R +
Sbjct: 287 VKKLLESRYHQIGSGKCEIKVAQPK-EVYRQQ 317
>UNIPROTKB|E2QRT0 [details] [associations]
symbol:HNRPDL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 CTD:9987
GeneTree:ENSGT00700000104347 KO:K13044 OMA:QHPPADN
EMBL:AAEX03016723 RefSeq:XP_858404.1 Ensembl:ENSCAFT00000014224
GeneID:476976 KEGG:cfa:476976 NextBio:20852539 Uniprot:E2QRT0
Length = 420
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 67/170 (39%), Positives = 97/170 (57%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+FIGGL + TS + L + +G+VVD + DP T +SRGFGF+ + A VD
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
+ H +D K+++PKRA P KK+FVG L D +EE +KEYFG FGE+ ++
Sbjct: 209 KEHKLDGKLIDPKRAKALKGKEPP------KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 262
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKE 179
L + +T ++RGF F+ Y D +PV K H + K ++K A KE
Sbjct: 263 ELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPKE 312
Score = 146 (56.5 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 35/92 (38%), Positives = 53/92 (57%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEP +K+F+GGL TS E +K +F A+G++ ++ + D +T + RGF FITY+
Sbjct: 229 KEPP--KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEP 286
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPE 94
V +R H I S E K A P+ E+ R +
Sbjct: 287 VKKLLESRYHQIGSGKCEIKVAQPK-EVYRQQ 317
>UNIPROTKB|O14979 [details] [associations]
symbol:HNRPDL "Heterogeneous nuclear ribonucleoprotein
D-like" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0008143 "poly(A)
RNA binding" evidence=IDA] [GO:0034046 "poly(G) RNA binding"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=NAS]
[GO:0006396 "RNA processing" evidence=NAS] [GO:0010468 "regulation
of gene expression" evidence=IDA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:D89678 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0000166
GO:GO:0003677 Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0005681
GO:GO:0003723 GO:GO:0006396 GO:GO:0003690 GO:GO:0003697
GO:GO:0010468 GO:GO:0034046 eggNOG:COG0724 GO:GO:0008143
HOGENOM:HOG000234441 HOVERGEN:HBG002295 HSSP:Q14103 CTD:9987
KO:K13044 EMBL:AB017019 EMBL:D89092 EMBL:AB066484 EMBL:CR407623
EMBL:AC124016 EMBL:AB017018 EMBL:BC007392 EMBL:BC011714
EMBL:BC071944 EMBL:AY453824 IPI:IPI00011274 IPI:IPI00045498
IPI:IPI00845282 PIR:JW0079 RefSeq:NP_001193929.1 RefSeq:NP_112740.1
UniGene:Hs.527105 UniGene:Hs.731516 ProteinModelPortal:O14979
SMR:O14979 IntAct:O14979 STRING:O14979 PhosphoSite:O14979
PaxDb:O14979 PRIDE:O14979 DNASU:9987 Ensembl:ENST00000295470
Ensembl:ENST00000349655 Ensembl:ENST00000502762 GeneID:9987
KEGG:hsa:9987 UCSC:uc003hmr.3 GeneCards:GC04M083343 HGNC:HGNC:5037
MIM:607137 neXtProt:NX_O14979 PharmGKB:PA29362 InParanoid:O14979
OMA:QHPPADN OrthoDB:EOG49W2FZ PhylomeDB:O14979 ChiTaRS:HNRPDL
GenomeRNAi:9987 NextBio:37714 ArrayExpress:O14979 Bgee:O14979
CleanEx:HS_HNRPDL Genevestigator:O14979 Uniprot:O14979
Length = 420
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 67/170 (39%), Positives = 97/170 (57%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+FIGGL + TS + L + +G+VVD + DP T +SRGFGF+ + A VD
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
+ H +D K+++PKRA P KK+FVG L D +EE +KEYFG FGE+ ++
Sbjct: 209 KEHKLDGKLIDPKRAKALKGKEPP------KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 262
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKE 179
L + +T ++RGF F+ Y D +PV K H + K ++K A KE
Sbjct: 263 ELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPKE 312
Score = 146 (56.5 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 35/92 (38%), Positives = 53/92 (57%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEP +K+F+GGL TS E +K +F A+G++ ++ + D +T + RGF FITY+
Sbjct: 229 KEPP--KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEP 286
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPE 94
V +R H I S E K A P+ E+ R +
Sbjct: 287 VKKLLESRYHQIGSGKCEIKVAQPK-EVYRQQ 317
>MGI|MGI:1355299 [details] [associations]
symbol:Hnrpdl "heterogeneous nuclear ribonucleoprotein
D-like" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISA] [GO:0003690
"double-stranded DNA binding" evidence=ISO] [GO:0003697
"single-stranded DNA binding" evidence=ISO] [GO:0003723 "RNA
binding" evidence=ISA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008143 "poly(A)
RNA binding" evidence=ISO] [GO:0010468 "regulation of gene
expression" evidence=ISO] [GO:0016071 "mRNA metabolic process"
evidence=ISA] [GO:0034046 "poly(G) RNA binding" evidence=ISO]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 MGI:MGI:1355299 GO:GO:0005634 GO:GO:0005737
GO:GO:0016071 GO:GO:0006355 GO:GO:0000166 GO:GO:0003677
Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723 eggNOG:COG0724
HOGENOM:HOG000234441 HOVERGEN:HBG002295 HSSP:Q14103 ChiTaRS:HNRPDL
EMBL:AB017020 EMBL:AK011581 EMBL:AK172629 EMBL:BC021374
IPI:IPI00129417 UniGene:Mm.389579 ProteinModelPortal:Q9Z130
SMR:Q9Z130 IntAct:Q9Z130 STRING:Q9Z130 PhosphoSite:Q9Z130
PaxDb:Q9Z130 PRIDE:Q9Z130 InParanoid:Q9Z130 Bgee:Q9Z130
CleanEx:MM_HNRPDL Genevestigator:Q9Z130 Uniprot:Q9Z130
Length = 301
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 67/170 (39%), Positives = 97/170 (57%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+FIGGL + TS + L + +G+VVD + DP T +SRGFGF+ + A VD
Sbjct: 30 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 89
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
+ H +D K+++PKRA P KK+FVG L D +EE +KEYFG FGE+ ++
Sbjct: 90 KEHKLDGKLIDPKRAKALKGKEPP------KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 143
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKE 179
L + +T ++RGF F+ Y D +PV K H + K ++K A KE
Sbjct: 144 ELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPKE 193
Score = 146 (56.5 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 35/92 (38%), Positives = 53/92 (57%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEP +K+F+GGL TS E +K +F A+G++ ++ + D +T + RGF FITY+
Sbjct: 110 KEPP--KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEP 167
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPE 94
V +R H I S E K A P+ E+ R +
Sbjct: 168 VKKLLESRYHQIGSGKCEIKVAQPK-EVYRQQ 198
>ZFIN|ZDB-GENE-040426-2516 [details] [associations]
symbol:zgc:77052 "zgc:77052" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-040426-2516 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 eggNOG:COG0724 HOGENOM:HOG000234441
HOVERGEN:HBG002295 GeneTree:ENSGT00700000104347 InterPro:IPR012956
Pfam:PF08143 OrthoDB:EOG42BX9K EMBL:FP085391 EMBL:BC066681
IPI:IPI00497482 RefSeq:NP_998467.1 UniGene:Dr.75633 SMR:Q6NYA1
STRING:Q6NYA1 Ensembl:ENSDART00000098408 GeneID:406594
KEGG:dre:406594 OMA:EIKTYFS NextBio:20818146 Uniprot:Q6NYA1
Length = 309
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 69/178 (38%), Positives = 104/178 (58%)
Query: 2 TKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAH 61
+K E K+F+GGL + TS + LK +F +G+V+D + D T +SRGFGFI + +
Sbjct: 38 SKCEEDAGKMFVGGLSWDTSKKDLKDYFSKFGEVMDCTIKMDSNTGRSRGFGFILFKESD 97
Query: 62 MVDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFG 121
VD + H +D + ++PKRA+ + P VKK+FVG L + TEE ++EYFG
Sbjct: 98 SVDRVLQQKEHRLDGRQIDPKRAMAIKK--EP-----VKKIFVGGLNPETTEEKIREYFG 150
Query: 122 QFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKE 179
FGE+ ++ L T+ +T K+RGF F+ + + V K K H V G K ++K A KE
Sbjct: 151 SFGEIETIELPTDPKTSKRRGFVFITFKEEFAVKKILEKKYHNVCGSKCEIKIAQPKE 208
Score = 144 (55.7 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 31/97 (31%), Positives = 53/97 (54%)
Query: 1 ITKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSA 60
I KEP ++K+F+GGL+ T+ E ++ +F ++G++ + + DP+T K RGF FIT+
Sbjct: 123 IKKEP--VKKIFVGGLNPETTEEKIREYFGSFGEIETIELPTDPKTSKRRGFVFITFKEE 180
Query: 61 HMVDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGA 97
V + H + E K A P+ + + GA
Sbjct: 181 FAVKKILEKKYHNVCGSKCEIKIAQPKEIYQQQQFGA 217
>UNIPROTKB|I3LPG0 [details] [associations]
symbol:MSI1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008266 "poly(U) RNA binding" evidence=IEA] [GO:0005844
"polysome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0005737 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0005844 GeneTree:ENSGT00700000104255 OMA:GLPGSHP
EMBL:FP690339 Ensembl:ENSSSCT00000027694 Uniprot:I3LPG0
Length = 332
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 68/160 (42%), Positives = 96/160 (60%)
Query: 23 ETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAARPHTIDSKVVEPK 82
E L+ +F +G+ + +VM+DP TK+SRGFGF+T+ VD A H +DSK ++PK
Sbjct: 1 EGLREYFGQFGEEKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPK 60
Query: 83 RAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRG 142
A PR +P+ KK+FVG L + T ED+K+YF QFG+V L+ +K T + RG
Sbjct: 61 VAFPRRA--QPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRG 118
Query: 143 FGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
FGFV + D V+K C H + K V+ KKA KE M+
Sbjct: 119 FGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMS 158
Score = 174 (66.3 bits), Expect = 7.7e-13, P = 7.7e-13
Identities = 35/89 (39%), Positives = 55/89 (61%)
Query: 9 RKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQA 68
+K+F+GGL T+ E +K +FE +G V D ++M D T + RGFGF+T+ S +V+
Sbjct: 76 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 135
Query: 69 ARPHTIDSKVVEPKRAVPRTEINRPEAGA 97
H I++K+VE K+A P+ E+ P A
Sbjct: 136 IHFHEINNKMVECKKAQPK-EVMSPTGSA 163
Score = 139 (54.0 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 29/74 (39%), Positives = 40/74 (54%)
Query: 114 EDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVK 173
E L+EYFGQFGE ++ + T + RGFGFV + D VDK + H + K +D K
Sbjct: 1 EGLREYFGQFGEEKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPK 60
Query: 174 KALSKEEMAKLKTR 187
A + K+ TR
Sbjct: 61 VAFPRRAQPKMVTR 74
>ZFIN|ZDB-GENE-040426-2717 [details] [associations]
symbol:hnrpdl "heterogeneous nuclear
ribonucleoprotein D-like" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-040426-2717
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529
eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295 HSSP:Q14103
CTD:9987 GeneTree:ENSGT00700000104347 KO:K13044 OMA:QHPPADN
OrthoDB:EOG49W2FZ EMBL:CR847788 EMBL:BC055525 IPI:IPI00500216
RefSeq:NP_998557.1 UniGene:Dr.75234 SMR:Q7SXN2 STRING:Q7SXN2
Ensembl:ENSDART00000020631 GeneID:406701 KEGG:dre:406701
InParanoid:Q7SXN2 NextBio:20818224 Uniprot:Q7SXN2
Length = 296
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 72/186 (38%), Positives = 104/186 (55%)
Query: 2 TKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAH 61
+K E K+FIGGL + TS + L + +G+V+D + DP T +SRGFGF+ + A
Sbjct: 23 SKNQEDDGKMFIGGLSWDTSKKDLTDYLSRFGEVLDCTIKTDPLTGRSRGFGFVLFKDAE 82
Query: 62 MVDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFG 121
VD H +D K+++PKRA I E KK+FVG L DITEE L+EYFG
Sbjct: 83 SVDRVLELTEHKLDGKLIDPKRA---KAIKGKEPP---KKVFVGGLSPDITEEQLREYFG 136
Query: 122 QFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEM 181
+GE+ S+ L T+ +T ++RGF FV + +PV K H + K ++K A KE
Sbjct: 137 VYGEIESIELPTDTKTNERRGFCFVTFALEEPVQKLLENRYHQIGSGKCEIKVAQPKEVY 196
Query: 182 AKLKTR 187
+ + R
Sbjct: 197 RQQQNR 202
>UNIPROTKB|J9P0Y4 [details] [associations]
symbol:J9P0Y4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104376 EMBL:AAEX03013644
Ensembl:ENSCAFT00000045249 OMA:SEEGYNG Uniprot:J9P0Y4
Length = 223
Score = 248 (92.4 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 51/129 (39%), Positives = 77/129 (59%)
Query: 8 LRKLFIGGLDYRTSSETLKSHFEAWG--DVV-----DVVVMKDPQTKKSRGFGFITYSSA 60
L+KLF GGL + T+ E+L+SH E WG VV D VV++D TK+SR FG+ T
Sbjct: 1 LQKLFFGGLSFETTDESLRSHSEQWGILTVVCVLMRDYVVLRDSNTKRSRSFGYATMGE- 59
Query: 61 HMVDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYF 120
V+ +PH +D VE KR + + RP A T++K+FVG +++D E L++YF
Sbjct: 60 --VEAIMNGKPHKVDGIAVELKRPISKESSQRPGAHLTLRKIFVGGIKEDAEEHHLRDYF 117
Query: 121 GQFGEVTSV 129
Q+G++ +
Sbjct: 118 EQYGKIEMI 126
Score = 94 (38.1 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 143 FGFVEY-NDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G +E +DYD VDK ++ H V G +V+KALSK+EMA
Sbjct: 120 YGKIEMIDDYDSVDKIIIQKYHTVNGHDSEVRKALSKQEMA 160
>UNIPROTKB|F1NCV5 [details] [associations]
symbol:HNRPDL "Heterogeneous nuclear ribonucleoprotein
D-like" species:9031 "Gallus gallus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GeneTree:ENSGT00700000104347 OMA:QHPPADN
EMBL:AADN02009038 EMBL:AADN02009039 IPI:IPI00822447
Ensembl:ENSGALT00000038016 Uniprot:F1NCV5
Length = 338
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 66/170 (38%), Positives = 97/170 (57%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+FIGGL + TS + L + +G+VVD + DP T +SRGFGF+ + A V+
Sbjct: 67 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVEKVLEL 126
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
+ H +D K+++PKRA P KK+FVG L D +EE +KEYFG FGE+ ++
Sbjct: 127 KEHKLDGKLIDPKRAKALKGKEPP------KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 180
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKE 179
L + +T ++RGF F+ Y D +PV K H + K ++K A KE
Sbjct: 181 ELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPKE 230
Score = 146 (56.5 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 35/92 (38%), Positives = 53/92 (57%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEP +K+F+GGL TS E +K +F A+G++ ++ + D +T + RGF FITY+
Sbjct: 147 KEPP--KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEP 204
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPE 94
V +R H I S E K A P+ E+ R +
Sbjct: 205 VKKLLESRYHQIGSGKCEIKVAQPK-EVYRQQ 235
>UNIPROTKB|Q5ZI72 [details] [associations]
symbol:HNRPDL "Heterogeneous nuclear ribonucleoprotein
D-like" species:9031 "Gallus gallus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0000166 GO:GO:0003677 Gene3D:3.30.70.330 GO:GO:0006351
GO:GO:0003723 eggNOG:COG0724 HOGENOM:HOG000234441
HOVERGEN:HBG002295 EMBL:AJ720912 IPI:IPI00591109
RefSeq:NP_001026313.1 UniGene:Gga.4605 HSSP:Q14103
ProteinModelPortal:Q5ZI72 SMR:Q5ZI72 PRIDE:Q5ZI72
Ensembl:ENSGALT00000018235 GeneID:422601 KEGG:gga:422601 CTD:9987
GeneTree:ENSGT00700000104347 KO:K13044 NextBio:20825211
Uniprot:Q5ZI72
Length = 301
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 66/170 (38%), Positives = 97/170 (57%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+FIGGL + TS + L + +G+VVD + DP T +SRGFGF+ + A V+
Sbjct: 31 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVEKVLEL 90
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
+ H +D K+++PKRA P KK+FVG L D +EE +KEYFG FGE+ ++
Sbjct: 91 KEHKLDGKLIDPKRAKALKGKEPP------KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 144
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKE 179
L + +T ++RGF F+ Y D +PV K H + K ++K A KE
Sbjct: 145 ELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPKE 194
Score = 146 (56.5 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 35/92 (38%), Positives = 53/92 (57%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEP +K+F+GGL TS E +K +F A+G++ ++ + D +T + RGF FITY+
Sbjct: 111 KEPP--KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEP 168
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPE 94
V +R H I S E K A P+ E+ R +
Sbjct: 169 VKKLLESRYHQIGSGKCEIKVAQPK-EVYRQQ 199
>UNIPROTKB|L7N066 [details] [associations]
symbol:L7N066 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA]
GeneTree:ENSGT00550000074566 EMBL:AAEX03013421
Ensembl:ENSCAFT00000006911 Uniprot:L7N066
Length = 309
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 74/181 (40%), Positives = 108/181 (59%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEP+ LRKLFIGGL T+ E+L+SH E WG + D V M+DP+ K+SRGFG
Sbjct: 8 KEPQ-LRKLFIGGLSLETTDESLRSHSEQWGRLADCVAMRDPKAKRSRGFGV----GPGP 62
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
+++A A P + +RAV + RP GA + FVG ++ D E ++ Q
Sbjct: 63 LEEAAAQEPGPPEVGRAWTQRAVSPGDSRRP--GAHI---FVGGIKGDPEEHHPRDCLEQ 117
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G V + VT++ G++RGF FV ++D+D VDK ++ H VKG +V+KAL K+EMA
Sbjct: 118 YGNVEVMETVTDRGRGEERGFAFVTFDDHDSVDKIVIQKCHPVKGHSCEVRKALWKQEMA 177
Query: 183 K 183
+
Sbjct: 178 R 178
>TAIR|locus:2168848 [details] [associations]
symbol:AT5G40490 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005829 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0030529 EMBL:AB009052 HOGENOM:HOG000234441
HSSP:Q61474 KO:K12741 eggNOG:NOG289504 EMBL:AY136466
IPI:IPI00518075 RefSeq:NP_198865.1 UniGene:At.30284
ProteinModelPortal:Q9FM47 SMR:Q9FM47 PaxDb:Q9FM47 PRIDE:Q9FM47
EnsemblPlants:AT5G40490.1 GeneID:834047 KEGG:ath:AT5G40490
TAIR:At5g40490 InParanoid:Q9FM47 OMA:YESEDMV PhylomeDB:Q9FM47
ProtClustDB:CLSN2916909 ArrayExpress:Q9FM47 Genevestigator:Q9FM47
Uniprot:Q9FM47
Length = 423
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 66/171 (38%), Positives = 101/171 (59%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+F+GGL T+S HF +G++ D V+MKD +T + RGFGF+TY+ + +VD
Sbjct: 43 KIFVGGLARETTSAEFLKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADSSVVDKVIQD 102
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
H I K VE KR +PR ++ + KK+FVG + + +++ KE+F QFGE+
Sbjct: 103 N-HIIIGKQVEIKRTIPRGSMSSNDF--KTKKIFVGGIPSSVDDDEFKEFFMQFGELKEH 159
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHL-VKGKKVDVKKALSKE 179
++ + TG+ RGFGFV Y D VD KG + + G +V++KKA K+
Sbjct: 160 QIMRDHSTGRSRGFGFVTYESEDMVDHLLAKGNRIELSGTQVEIKKAEPKK 210
Score = 180 (68.4 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 35/102 (34%), Positives = 64/102 (62%)
Query: 91 NRPEAGATVK---KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVE 147
++P +G V K+FVG L + T + ++FG++GE+T ++ +++TG+ RGFGFV
Sbjct: 30 SQPHSGGGVDSAGKIFVGGLARETTSAEFLKHFGKYGEITDSVIMKDRKTGQPRGFGFVT 89
Query: 148 YNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMAK--LKTR 187
Y D VDK ++ H++ GK+V++K+ + + M+ KT+
Sbjct: 90 YADSSVVDKV-IQDNHIIIGKQVEIKRTIPRGSMSSNDFKTK 130
Score = 138 (53.6 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 34/103 (33%), Positives = 53/103 (51%)
Query: 9 RKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQA 68
+K+F+GG+ + K F +G++ + +M+D T +SRGFGF+TY S MVD A
Sbjct: 130 KKIFVGGIPSSVDDDEFKEFFMQFGELKEHQIMRDHSTGRSRGFGFVTYESEDMVDHLLA 189
Query: 69 ARPHT-IDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDD 110
+ VE K+A P+ +P + T K F G R +
Sbjct: 190 KGNRIELSGTQVEIKKAEPK----KPNSVTTPSKRF-GDSRSN 227
>TAIR|locus:2129590 [details] [associations]
symbol:AT4G14300 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 EMBL:CP002687 GO:GO:0000166
Gene3D:3.30.70.330 EMBL:Z97335 EMBL:AL161538 GO:GO:0003676
GO:GO:0030529 eggNOG:COG0724 HOGENOM:HOG000234441 KO:K14411
HSSP:Q61474 EMBL:AJ303457 EMBL:AK226323 IPI:IPI00517003 PIR:G71404
RefSeq:NP_193166.2 UniGene:At.33295 ProteinModelPortal:Q8W034
SMR:Q8W034 IntAct:Q8W034 MINT:MINT-1163850 STRING:Q8W034
PaxDb:O23288 PRIDE:Q8W034 EnsemblPlants:AT4G14300.1 GeneID:827071
KEGG:ath:AT4G14300 TAIR:At4g14300 InParanoid:Q8W034 OMA:YGATNIP
PhylomeDB:Q8W034 ProtClustDB:CLSN2913105 Genevestigator:Q8W034
Uniprot:Q8W034
Length = 411
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 69/184 (37%), Positives = 109/184 (59%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
KLF+GG+ + T + L+ HF +G+V +VM+D T + RGFGF+ +S ++D
Sbjct: 7 KLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQE 66
Query: 70 RPHTIDSKVVEPKRAVPRTE---------IN--RPEAGAT---VKKLFVGSLRDDITEED 115
+ H+ID++ V+ KRA+ R E +N R G KK+FVG L +T+E+
Sbjct: 67 K-HSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLTDEE 125
Query: 116 LKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKA 175
++YF +G VT VA++ ++ T + RGFGFV ++ D VD K H + GK+V+VK+A
Sbjct: 126 FRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQVEVKRA 185
Query: 176 LSKE 179
L K+
Sbjct: 186 LPKD 189
Score = 169 (64.5 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 33/80 (41%), Positives = 55/80 (68%)
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLK 160
KLFVG + + E+ L+E+F +GEV+ ++ +K TG+ RGFGFV ++D +D+ L+
Sbjct: 7 KLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRV-LQ 65
Query: 161 GTHLVKGKKVDVKKALSKEE 180
H + ++VDVK+A+S+EE
Sbjct: 66 EKHSIDTREVDVKRAMSREE 85
Score = 165 (63.1 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 31/79 (39%), Positives = 46/79 (58%)
Query: 9 RKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQA 68
+K+F+GGL + E + +FE +G V DV +M D T + RGFGF+++ S VD
Sbjct: 110 KKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLH 169
Query: 69 ARPHTIDSKVVEPKRAVPR 87
H + K VE KRA+P+
Sbjct: 170 KTFHDLSGKQVEVKRALPK 188
>ZFIN|ZDB-GENE-030131-185 [details] [associations]
symbol:hnrnpab "heterogeneous nuclear
ribonucleoprotein A/B" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030131-185
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104347 InterPro:IPR012956 Pfam:PF08143
EMBL:CU658205 IPI:IPI01023938 Ensembl:ENSDART00000148447
ArrayExpress:F8W4E3 Uniprot:F8W4E3
Length = 366
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 68/185 (36%), Positives = 107/185 (57%)
Query: 2 TKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAH 61
+K E K+F+GGL + TS + LK +F +G+V D + DP T +SRGFGFI +
Sbjct: 88 SKGEEDAGKMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDPNTGRSRGFGFILFKEPS 147
Query: 62 MVDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFG 121
VD A + H +D + ++PK+A+ + P VKK+FVG L + TEE ++EYFG
Sbjct: 148 GVDKVLAQKEHRLDGRQIDPKKAMAMKK--EP-----VKKIFVGGLNPETTEERIREYFG 200
Query: 122 QFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKK-VDVKKALSKEE 180
FGE+ ++ L + ++ K+RGF F+ + + + V K K H V G K K+ L + +
Sbjct: 201 AFGEIETIELPMDPKSNKRRGFVFITFKEEEAVKKILEKKYHNVSGTKDTSGKEGLCEIK 260
Query: 181 MAKLK 185
+A+ K
Sbjct: 261 IAQPK 265
>UNIPROTKB|E2REM2 [details] [associations]
symbol:E2REM2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662 Pfam:PF11627
GeneTree:ENSGT00550000074566 EMBL:AAEX03016228
Ensembl:ENSCAFT00000027720 Uniprot:E2REM2
Length = 207
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 64/120 (53%), Positives = 82/120 (68%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE L+KLFIGGL + T+ E+L+SHFE WG + VVM+DP TK+SRGFGF+TY++
Sbjct: 8 KEPEQLQKLFIGGLSFETTDESLRSHFE-WGTLTGCVVMRDPNTKRSRGFGFVTYATVEE 66
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDI-TEEDLKEYFG 121
VD A ARPH +D +VVEPKRAV R + +A TVKK+F G +D T + FG
Sbjct: 67 VDAAMNARPHKVDGRVVEPKRAVSREDSQTLDAHLTVKKIFGGGSYNDFGTYNNQSSNFG 126
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 32/92 (34%), Positives = 54/92 (58%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ ++KLF+G L + T+E L+ +F ++G +T ++ + T + RGFGFV Y +
Sbjct: 7 PKEPEQLQKLFIGGLSFETTDESLRSHF-EWGTLTGCVVMRDPNTKRSRGFGFVTYATVE 65
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEEMAKL 184
VD A H V G+ V+ K+A+S+E+ L
Sbjct: 66 EVDAAMNARPHKVDGRVVEPKRAVSREDSQTL 97
>UNIPROTKB|F1PD20 [details] [associations]
symbol:F1PD20 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 GeneTree:ENSGT00550000074566 EMBL:AAEX03013453
Ensembl:ENSCAFT00000007675 Uniprot:F1PD20
Length = 309
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 73/181 (40%), Positives = 107/181 (59%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEP+ LRKLFIGGL T+ E+L+SH E WG + D V M+DP+ K+SRGFG
Sbjct: 8 KEPQ-LRKLFIGGLSLETTDESLRSHSEQWGRLADCVAMRDPKAKRSRGFGV----GPGP 62
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
+++A A P + +RAV + RP GA + FVG ++ D E ++ Q
Sbjct: 63 LEEAAAQEPGPPEVGRAWTQRAVSPGDSRRP--GAHI---FVGGIKGDPEEHHPRDCLEQ 117
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G V + VT++ G++RGF FV ++D+D VDK ++ H KG +V+KAL K+EMA
Sbjct: 118 YGNVEVMETVTDRGRGEERGFAFVTFDDHDSVDKIVIQKCHPGKGHSCEVRKALWKQEMA 177
Query: 183 K 183
+
Sbjct: 178 R 178
>FB|FBgn0263396 [details] [associations]
symbol:sqd "squid" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=IC;IDA;TAS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005703 "polytene chromosome puff" evidence=IDA]
[GO:0008069 "dorsal/ventral axis specification, ovarian follicular
epithelium" evidence=IMP] [GO:0007297 "ovarian follicle cell
migration" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP;TAS]
[GO:0008298 "intracellular mRNA localization" evidence=NAS;TAS]
[GO:0017148 "negative regulation of translation" evidence=TAS]
[GO:0003730 "mRNA 3'-UTR binding" evidence=TAS] [GO:0009953
"dorsal/ventral pattern formation" evidence=IMP;TAS] [GO:0006405
"RNA export from nucleus" evidence=TAS] [GO:0030529
"ribonucleoprotein complex" evidence=ISS;NAS] [GO:0003729 "mRNA
binding" evidence=ISS;NAS] [GO:0035062 "omega speckle"
evidence=IDA] [GO:0000785 "chromatin" evidence=IDA] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=TAS]
[GO:0006406 "mRNA export from nucleus" evidence=NAS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0019094 "pole plasm mRNA localization"
evidence=IMP] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0016325 "oocyte microtubule cytoskeleton organization"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0007314 "oocyte anterior/posterior axis
specification" evidence=IMP] [GO:0045451 "pole plasm oskar mRNA
localization" evidence=IEP] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0033119 "negative regulation of RNA splicing"
evidence=IMP] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 EMBL:AE014297 GO:GO:0005737
GO:GO:0000184 GO:GO:0017148 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0000785 GO:GO:0003730 GO:GO:0006406 GO:GO:0033119
GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 GO:GO:0030720
GO:GO:0007297 eggNOG:COG0724 GO:GO:0045451 GO:GO:0005703
GO:GO:0000381 GO:GO:0016325 GO:GO:0008069
GeneTree:ENSGT00700000104255 GO:GO:0035062 EMBL:X62637 EMBL:X62638
EMBL:S61875 EMBL:S62100 EMBL:AY118501 EMBL:BT001384 EMBL:BT003283
EMBL:BT023832 EMBL:S51693 PIR:A47369 PIR:B41732 PIR:B47369
PIR:C48110 RefSeq:NP_001247088.1 RefSeq:NP_652209.1
RefSeq:NP_731825.1 RefSeq:NP_731826.1 RefSeq:NP_996203.1
UniGene:Dm.7189 ProteinModelPortal:Q08473 SMR:Q08473 IntAct:Q08473
MINT:MINT-847475 STRING:Q08473 PaxDb:Q08473
EnsemblMetazoa:FBtr0082855 GeneID:41666 KEGG:dme:Dmel_CG16901
CTD:41666 FlyBase:FBgn0263396 InParanoid:Q08473 KO:K03102
OMA:GDIDSIN OrthoDB:EOG43BK52 PhylomeDB:Q08473 ChiTaRS:sqd
GenomeRNAi:41666 NextBio:824926 Bgee:Q08473 GermOnline:CG16901
Uniprot:Q08473
Length = 344
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 65/172 (37%), Positives = 101/172 (58%)
Query: 9 RKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQA 68
RKLF+GGL + T+ + L+ HF +G++ + V DPQT +SRGF FI +++ +D A
Sbjct: 56 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSA 115
Query: 69 ARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTS 128
A H I+SK V+PK+A R G K+FVG L +I++E++K YFGQFG +
Sbjct: 116 ADEHIINSKKVDPKKAKARH-------G----KIFVGGLTTEISDEEIKTYFGQFGNIVE 164
Query: 129 VALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEE 180
V + +K+ +++GF F+ ++ V + GK+VDVK+A K E
Sbjct: 165 VEMPFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPE 216
>WB|WBGene00019249 [details] [associations]
symbol:H28G03.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00390000002308 EMBL:FO081568 RefSeq:NP_741783.1
UniGene:Cel.17692 ProteinModelPortal:H2L0D0 SMR:H2L0D0 PRIDE:H2L0D0
EnsemblMetazoa:H28G03.1a.1 EnsemblMetazoa:H28G03.1a.2 GeneID:180791
KEGG:cel:CELE_H28G03.1 CTD:180791 WormBase:H28G03.1a OMA:HIVNERK
Uniprot:H2L0D0
Length = 336
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 71/180 (39%), Positives = 104/180 (57%)
Query: 5 PEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVD 64
P LRKLFIGGL + T+ E L ++F WG VVD +V++DP TK SRGFGF+T++S +
Sbjct: 66 PPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAE 125
Query: 65 DAQAARPHTIDSKVVEPKRAVPRTEINR---P---EAG-ATVKKLFVGSLRDDITEED-L 116
A RPH + K V+ KRA+PR +++ P E A KL + + + + D L
Sbjct: 126 SAMNDRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSL 185
Query: 117 KEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACL---KGTHLVKGKKVDVK 173
+ YF FG + V ++ G+ RG GFV Y D + D+ CL G H+V +K++V+
Sbjct: 186 RVYFETFGTLDQVEIL-----GQPRGLGFVIYEDKESADR-CLAHNSGRHIVNERKIEVR 239
Score = 159 (61.0 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 31/86 (36%), Positives = 48/86 (55%)
Query: 99 VKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKAC 158
++KLF+G L D T+E L YF Q+G V ++ + T RGFGFV + + A
Sbjct: 69 LRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAM 128
Query: 159 LKGTHLVKGKKVDVKKALSKEEMAKL 184
H + GK VD K+A+ +E+M+ +
Sbjct: 129 NDRPHKLGGKTVDSKRAIPREQMSSM 154
>TAIR|locus:504955752 [details] [associations]
symbol:AT3G13224 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000234441 HSSP:Q14103
KO:K12741 OMA:HAINGHH EMBL:AP002042 EMBL:AY080630 EMBL:AY123003
EMBL:AK221448 IPI:IPI00534312 RefSeq:NP_683559.2 UniGene:At.27259
ProteinModelPortal:Q9LHL2 SMR:Q9LHL2 IntAct:Q9LHL2 PRIDE:Q9LHL2
EnsemblPlants:AT3G13224.2 GeneID:820515 KEGG:ath:AT3G13224
TAIR:At3g13224 InParanoid:Q9LHL2 PhylomeDB:Q9LHL2
ProtClustDB:CLSN2918087 Genevestigator:Q9LHL2 Uniprot:Q9LHL2
Length = 358
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 61/173 (35%), Positives = 100/173 (57%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+FIGGL T++ HF +G++ D V+M+D T + RGFGFIT++ +VD
Sbjct: 20 KIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVVDKV-IE 78
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
H I+ K VE KR +P+ KK+FVG + +TE++LK++F ++G V
Sbjct: 79 DTHVINGKQVEIKRTIPKGAGGNQSKDIKTKKIFVGGIPSTVTEDELKDFFAKYGNVVEH 138
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHL-VKGKKVDVKKALSKEEM 181
++ + ET + RGFGFV ++ + VD+ KG + + +V++KKA K+ +
Sbjct: 139 QVIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMIDMADTQVEIKKAEPKKSL 191
Score = 183 (69.5 bits), Expect = 9.8e-14, P = 9.8e-14
Identities = 31/83 (37%), Positives = 55/83 (66%)
Query: 96 GATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVD 155
GA+ K+F+G L D T ++FG++GE+T ++ ++ TG+ RGFGF+ + D VD
Sbjct: 15 GASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVVD 74
Query: 156 KACLKGTHLVKGKKVDVKKALSK 178
K ++ TH++ GK+V++K+ + K
Sbjct: 75 KV-IEDTHVINGKQVEIKRTIPK 96
Score = 153 (58.9 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 33/93 (35%), Positives = 57/93 (61%)
Query: 9 RKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQA 68
+K+F+GG+ + + LK F +G+VV+ V++D +T +SRGFGF+ + S +VD+
Sbjct: 109 KKIFVGGIPSTVTEDELKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDEL-L 167
Query: 69 ARPHTID--SKVVEPKRAVPRTEINR--PEAGA 97
++ + ID VE K+A P+ +NR P G+
Sbjct: 168 SKGNMIDMADTQVEIKKAEPKKSLNRSPPSYGS 200
>UNIPROTKB|F1PSN2 [details] [associations]
symbol:F1PSN2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 GeneTree:ENSGT00550000074566 EMBL:AAEX03003214
Ensembl:ENSCAFT00000027618 Uniprot:F1PSN2
Length = 268
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 66/180 (36%), Positives = 103/180 (57%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEP LRK F L ++T+++ +S E W + VD VV K SRGFG +TY++
Sbjct: 7 KEPAQLRKFFTEVLRFKTTNDRPRSPSEQWREFVDYVV----NHKHSRGFGSVTYATVEE 62
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A ARPH +D++VVEPKR V ATV+ +FVG +++D E L+ Y Q
Sbjct: 63 VDAAMNARPHKVDARVVEPKRDVSE---------ATVQNIFVGDIKEDTEEYHLQNYLEQ 113
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+G+ ++ + + +GKKRGF F+ ++ +D + + + H G +V+K K+E+A
Sbjct: 114 YGKTKAIESMNDLGSGKKRGFAFMTFDGHDSIGRIVTQKHHTGNGHNCEVRKTYFKQEVA 173
>UNIPROTKB|F1PD64 [details] [associations]
symbol:F1PD64 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662 Pfam:PF11627
GeneTree:ENSGT00550000074566 EMBL:AAEX03002771
Ensembl:ENSCAFT00000021102 Uniprot:F1PD64
Length = 256
Score = 274 (101.5 bits), Expect = 9.4e-27, Sum P(2) = 9.4e-27
Identities = 50/90 (55%), Positives = 65/90 (72%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE L KLFI GL + T++E+L+SHFE WG + D V M+DP TK SRG GF+TY++
Sbjct: 8 KEPEQLWKLFIRGLSFETTNESLRSHFEQWGTLTDWVAMRDPNTKHSRGLGFVTYATVEE 67
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINR 92
VD A RPH +D +VVEPKRAV R + ++
Sbjct: 68 VDAAMNTRPHKVDGRVVEPKRAVSRQDCHK 97
Score = 134 (52.2 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 30/91 (32%), Positives = 48/91 (52%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ + KLF+ L + T E L+ +F Q+G +T + + T RG GFV Y +
Sbjct: 7 PKEPEQLWKLFIRGLSFETTNESLRSHFEQWGTLTDWVAMRDPNTKHSRGLGFVTYATVE 66
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEEMAK 183
VD A H V G+ V+ K+A+S+++ K
Sbjct: 67 EVDAAMNTRPHKVDGRVVEPKRAVSRQDCHK 97
Score = 42 (19.8 bits), Expect = 9.4e-27, Sum P(2) = 9.4e-27
Identities = 8/11 (72%), Positives = 11/11 (100%)
Query: 171 DVKKALSKEEM 181
+V+KALSK+EM
Sbjct: 109 EVRKALSKQEM 119
>UNIPROTKB|L7N0C2 [details] [associations]
symbol:L7N0C2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA]
GeneTree:ENSGT00550000074566 EMBL:AAEX03014397
Ensembl:ENSCAFT00000016130 Uniprot:L7N0C2
Length = 278
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 56/114 (49%), Positives = 81/114 (71%)
Query: 70 RP-HTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTS 128
RP H +D +VVEPKRAV R + RP A TVKK+FVG +++D E L++YF Q+G++
Sbjct: 38 RPAHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 97
Query: 129 VALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
+ ++T + +GKKRGF FV ++D+D VDK ++ H V G +V+KALSK+EMA
Sbjct: 98 IEIMTGRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMA 151
Score = 124 (48.7 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 23/83 (27%), Positives = 45/83 (54%)
Query: 8 LRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQ 67
++K+F+GG+ T L+ +FE +G + + +M + K RGF F+T+ VD
Sbjct: 68 VKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTGRGSGKKRGFAFVTFDDHDSVDKIV 127
Query: 68 AARPHTIDSKVVEPKRAVPRTEI 90
+ HT++ E ++A+ + E+
Sbjct: 128 IQKYHTVNGHNCEVRKALSKQEM 150
>UNIPROTKB|F1P8M3 [details] [associations]
symbol:F1P8M3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662 Pfam:PF11627
GeneTree:ENSGT00550000074566 EMBL:AAEX03015267
Ensembl:ENSCAFT00000039191 Uniprot:F1P8M3
Length = 210
Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 57/103 (55%), Positives = 72/103 (69%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KE E L FI GL ++T+ ETL+SHFE WG ++D V M+DP TK SRGFGF+ Y++
Sbjct: 8 KELEQLWNFFISGLSFKTTYETLRSHFEQWGMLIDCVAMRDPNTKLSRGFGFVMYATMEE 67
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVG 105
VD A ARPH +D +VVE KRAV + + RP A TVKK+FVG
Sbjct: 68 VDAAMKARPHKVDGRVVERKRAVSQEDSQRPGAHLTVKKIFVG 110
Score = 119 (46.9 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 27/78 (34%), Positives = 41/78 (52%)
Query: 103 FVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGT 162
F+ L T E L+ +F Q+G + + + T RGFGFV Y + VD A
Sbjct: 17 FISGLSFKTTYETLRSHFEQWGMLIDCVAMRDPNTKLSRGFGFVMYATMEEVDAAMKARP 76
Query: 163 HLVKGKKVDVKKALSKEE 180
H V G+ V+ K+A+S+E+
Sbjct: 77 HKVDGRVVERKRAVSQED 94
>TAIR|locus:2007903 [details] [associations]
symbol:AT1G17640 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002684 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
KO:K12741 OMA:GHQTGYK IPI:IPI00519530 RefSeq:NP_173208.1
UniGene:At.51654 ProteinModelPortal:F4I906 SMR:F4I906 PRIDE:F4I906
EnsemblPlants:AT1G17640.1 GeneID:838341 KEGG:ath:AT1G17640
Uniprot:F4I906
Length = 369
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 61/171 (35%), Positives = 103/171 (60%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
KLF+GG+ + T++ET ++F +G+VVD V+M D T RGFGF+T++ + + +
Sbjct: 67 KLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEKV-LE 125
Query: 70 RPHTIDSKVVEPKRAVPRTEINRP-EAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTS 128
H ID + V+ KR +PR + + +A + +K+FVG L + E++LK YF +G++
Sbjct: 126 EDHVIDDRKVDLKRTLPRGDKDTDIKAVSKTRKIFVGGLPPLLEEDELKNYFCVYGDIIE 185
Query: 129 VALVTEKETGKKRGFGFVEYNDYDPVDKACLKG-THLVKGKKVDVKKALSK 178
++ + TG+ RGFGFV + D VD+ G H + K+V++K+A K
Sbjct: 186 HQIMYDHHTGRSRGFGFVTFQTEDSVDRLFSDGKVHELGDKQVEIKRAEPK 236
Score = 153 (58.9 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 31/80 (38%), Positives = 49/80 (61%)
Query: 9 RKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQA 68
RK+F+GGL + LK++F +GD+++ +M D T +SRGFGF+T+ + VD +
Sbjct: 157 RKIFVGGLPPLLEEDELKNYFCVYGDIIEHQIMYDHHTGRSRGFGFVTFQTEDSVDRLFS 216
Query: 69 -ARPHTIDSKVVEPKRAVPR 87
+ H + K VE KRA P+
Sbjct: 217 DGKVHELGDKQVEIKRAEPK 236
>TAIR|locus:2037633 [details] [associations]
symbol:RBP1 "RNA-binding protein 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0003727 "single-stranded RNA binding"
evidence=IDA] [GO:0008283 "cell proliferation" evidence=TAS]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 EMBL:CP002684 GO:GO:0000166 GO:GO:0008283
GO:GO:0003727 Gene3D:3.30.70.330 EMBL:AB077822 KO:K14411
EMBL:AC082643 HSSP:Q61474 EMBL:AY054536 EMBL:AY064643
IPI:IPI00548887 PIR:F96618 RefSeq:NP_176143.1 UniGene:At.17236
ProteinModelPortal:Q9C652 SMR:Q9C652 IntAct:Q9C652 STRING:Q9C652
PRIDE:Q9C652 EnsemblPlants:AT1G58470.1 GeneID:842216
KEGG:ath:AT1G58470 TAIR:At1g58470 InParanoid:Q9C652 OMA:VTYDSED
PhylomeDB:Q9C652 ProtClustDB:CLSN2914680 Genevestigator:Q9C652
Uniprot:Q9C652
Length = 360
Score = 197 (74.4 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 42/82 (51%), Positives = 55/82 (67%)
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEY-NDYDPVDKACL 159
KLFVG + + +EE LK+YF ++G V + EK TGK RGFGFV + ND D V KA L
Sbjct: 7 KLFVGGIAKETSEEALKQYFSRYGAVLEAVVAKEKVTGKPRGFGFVRFANDCDVV-KA-L 64
Query: 160 KGTHLVKGKKVDVKKALSKEEM 181
+ TH + GK VDV+KA+ K E+
Sbjct: 65 RDTHFILGKPVDVRKAIRKHEL 86
Score = 188 (71.2 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 38/89 (42%), Positives = 51/89 (57%)
Query: 9 RKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQA 68
+K+F+GGL T+ E KS+FE +G DVVVM D T + RGFGF+TY S V+
Sbjct: 120 KKIFVGGLSSNTTEEEFKSYFERFGRTTDVVVMHDGVTNRPRGFGFVTYDSEDSVEVVMQ 179
Query: 69 ARPHTIDSKVVEPKRAVPRTEINRPEAGA 97
+ H + K VE KRA+P+ I A
Sbjct: 180 SNFHELSDKRVEVKRAIPKEGIQSNNGNA 208
Score = 176 (67.0 bits), Expect = 4.6e-26, Sum P(2) = 4.6e-26
Identities = 34/80 (42%), Positives = 49/80 (61%)
Query: 100 KKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACL 159
KK+FVG L + TEE+ K YF +FG T V ++ + T + RGFGFV Y+ D V+
Sbjct: 120 KKIFVGGLSSNTTEEEFKSYFERFGRTTDVVVMHDGVTNRPRGFGFVTYDSEDSVEVVMQ 179
Query: 160 KGTHLVKGKKVDVKKALSKE 179
H + K+V+VK+A+ KE
Sbjct: 180 SNFHELSDKRVEVKRAIPKE 199
Score = 144 (55.7 bits), Expect = 4.6e-26, Sum P(2) = 4.6e-26
Identities = 33/82 (40%), Positives = 50/82 (60%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
KLF+GG+ TS E LK +F +G V++ VV K+ T K RGFGF+ + A+ D +A
Sbjct: 7 KLFVGGIAKETSEEALKQYFSRYGAVLEAVVAKEKVTGKPRGFGFVRF--ANDCDVVKAL 64
Query: 70 RP-HTIDSKVVEPKRAVPRTEI 90
R H I K V+ ++A+ + E+
Sbjct: 65 RDTHFILGKPVDVRKAIRKHEL 86
>TAIR|locus:2133862 [details] [associations]
symbol:AT4G26650 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0042732 "D-xylose
metabolic process" evidence=RCA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002687 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
KO:K14411 HSSP:Q61474 EMBL:AF419605 EMBL:AY097345 IPI:IPI00533249
RefSeq:NP_567753.1 UniGene:At.20416 UniGene:At.67937
ProteinModelPortal:Q8W569 SMR:Q8W569 STRING:Q8W569 PRIDE:Q8W569
EnsemblPlants:AT4G26650.1 GeneID:828772 KEGG:ath:AT4G26650
TAIR:At4g26650 InParanoid:Q8W569 OMA:LVEAVIM PhylomeDB:Q8W569
ProtClustDB:CLSN2689626 Genevestigator:Q8W569 Uniprot:Q8W569
Length = 455
Score = 296 (109.3 bits), Expect = 5.0e-26, P = 5.0e-26
Identities = 67/188 (35%), Positives = 101/188 (53%)
Query: 8 LRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVD--- 64
L KLFIGG+ + T E L+ +F +GD+V+ V+M+D T ++RGFGFI ++ + +
Sbjct: 14 LGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVI 73
Query: 65 -DAQAARPHTIDSKVVEP-------KRAVPRTEINRPE-----AGATVKKLFVGSLRDDI 111
D T+++K P KR + P GA KK+FVG L I
Sbjct: 74 MDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPSSI 133
Query: 112 TEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVD 171
TE + K YF QFG + V ++ + T + RGFGF+ ++ + VD K H + GK V+
Sbjct: 134 TEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKMVE 193
Query: 172 VKKALSKE 179
VK+A+ KE
Sbjct: 194 VKRAVPKE 201
Score = 176 (67.0 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 31/97 (31%), Positives = 60/97 (61%)
Query: 89 EINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEY 148
E + E+ + + KLF+G + D EE L+EYFG++G++ ++ ++ TG+ RGFGF+ +
Sbjct: 4 EEQKMESASDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVF 63
Query: 149 NDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMAKLK 185
D ++ + H++ G+ V+ KKA+ +++ LK
Sbjct: 64 ADPSVAERVIMD-KHIIDGRTVEAKKAVPRDDQQVLK 99
>TAIR|locus:2050992 [details] [associations]
symbol:AT2G33410 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002685 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AC002332 HOGENOM:HOG000234441 KO:K14411 HSSP:Q61474
ProtClustDB:CLSN2913105 OMA:GNDSSYG EMBL:AY136298 EMBL:BT000416
IPI:IPI00531202 PIR:B84745 RefSeq:NP_180899.1 UniGene:At.22217
ProteinModelPortal:O22791 SMR:O22791 IntAct:O22791 STRING:O22791
PRIDE:O22791 ProMEX:O22791 EnsemblPlants:AT2G33410.1 GeneID:817905
KEGG:ath:AT2G33410 TAIR:At2g33410 InParanoid:O22791
PhylomeDB:O22791 ArrayExpress:O22791 Genevestigator:O22791
Uniprot:O22791
Length = 404
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 66/184 (35%), Positives = 106/184 (57%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
KLFIGG+ + T L+ +F +G+V+ V VM++ T + RGFGF+ +S ++D
Sbjct: 7 KLFIGGISWDTDENLLREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDPAVIDRVLQD 66
Query: 70 RPHTIDSKVVEPKRAVPRTE---------INRP---EAGATV--KKLFVGSLRDDITEED 115
+ H ID++ V+ KRA+ R E N ++GA V KK+FVG L +T ++
Sbjct: 67 KHH-IDNRDVDVKRAMSREEQSPAGRSGTFNASRNFDSGANVRTKKIFVGGLPPALTSDE 125
Query: 116 LKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKA 175
+ YF +G V+ ++ ++ T + RGFGFV ++ D VD K H + GK+V+VK+A
Sbjct: 126 FRAYFETYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHDLNGKQVEVKRA 185
Query: 176 LSKE 179
L K+
Sbjct: 186 LPKD 189
Score = 188 (71.2 bits), Expect = 3.9e-14, P = 3.9e-14
Identities = 37/82 (45%), Positives = 54/82 (65%)
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLK 160
KLF+G + D E L+EYF FGEV V ++ EK TG+ RGFGFV ++D +D+ L+
Sbjct: 7 KLFIGGISWDTDENLLREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDPAVIDRV-LQ 65
Query: 161 GTHLVKGKKVDVKKALSKEEMA 182
H + + VDVK+A+S+EE +
Sbjct: 66 DKHHIDNRDVDVKRAMSREEQS 87
Score = 162 (62.1 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 31/79 (39%), Positives = 50/79 (63%)
Query: 9 RKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQA 68
+K+F+GGL +S+ +++FE +G V D V+M D T++ RGFGF+++ S VD
Sbjct: 110 KKIFVGGLPPALTSDEFRAYFETYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLH 169
Query: 69 ARPHTIDSKVVEPKRAVPR 87
H ++ K VE KRA+P+
Sbjct: 170 KTFHDLNGKQVEVKRALPK 188
>UNIPROTKB|J9NZR9 [details] [associations]
symbol:J9NZR9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104347 EMBL:AAEX03000342
Ensembl:ENSCAFT00000001210 OMA:GSKINAN Uniprot:J9NZR9
Length = 269
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 65/170 (38%), Positives = 94/170 (55%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+FI GL + TS + L +G+VVD ++ DP T +SRGFGF+ + A VD
Sbjct: 17 KMFIRGLSWDTSKKDL-----TFGEVVDCIIETDPVTGRSRGFGFVLFKEAASVDKVLEL 71
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
+ H +DS +++PKRA + P KK+FVG L D EE +KEY G FGE+ ++
Sbjct: 72 KEHKLDSMLIDPKRA---KALKEPP-----KKVFVGGLSPDTYEEQIKEYLGAFGEIENI 123
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKE 179
L + +T ++RGF F+ Y D PV K H + K ++K A KE
Sbjct: 124 ELPMDTKTNERRGFCFITYTDEKPVKKLLENRYHQIGSGKCEIKVAEPKE 173
Score = 131 (51.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 34/92 (36%), Positives = 50/92 (54%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEP +K+F+GGL T E +K + A+G++ ++ + D +T + RGF FITY+
Sbjct: 90 KEPP--KKVFVGGLSPDTYEEQIKEYLGAFGEIENIELPMDTKTNERRGFCFITYTDEKP 147
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPE 94
V R H I S E K A P+ EI R +
Sbjct: 148 VKKLLENRYHQIGSGKCEIKVAEPK-EIYRQQ 178
Score = 111 (44.1 bits), Expect = 0.00017, P = 0.00017
Identities = 28/83 (33%), Positives = 43/83 (51%)
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLK 160
K+F+ L D +++DL FGEV + T+ TG+ RGFGFV + + VDK
Sbjct: 17 KMFIRGLSWDTSKKDLT-----FGEVVDCIIETDPVTGRSRGFGFVLFKEAASVDKVLEL 71
Query: 161 GTHLVKGKKVDVKKALSKEEMAK 183
H + +D K+A + +E K
Sbjct: 72 KEHKLDSMLIDPKRAKALKEPPK 94
>DICTYBASE|DDB_G0292422 [details] [associations]
symbol:DDB_G0292422 "RNA-binding region RNP-1
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 dictyBase:DDB_G0292422 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AAFI02000190 KO:K14411
eggNOG:NOG289504 RefSeq:XP_629598.1 ProteinModelPortal:Q54D98
EnsemblProtists:DDB0233639 GeneID:8628658 KEGG:ddi:DDB_G0292422
InParanoid:Q54D98 OMA:YYEDESS Uniprot:Q54D98
Length = 687
Score = 295 (108.9 bits), Expect = 3.5e-25, P = 3.5e-25
Identities = 66/174 (37%), Positives = 109/174 (62%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQ-TKKSRGFGFITYSSAHMVDDAQA 68
K+F+GGL +S+E LK +F +G+V + +V+K + KSRGFGF+T+ ++D+
Sbjct: 107 KIFVGGLLKTSSNEILKDYFSNFGEVKESIVIKATEKASKSRGFGFVTFVDPSVIDEVIL 166
Query: 69 ARPHTIDSKVVEPKRAVPRTEINR-PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVT 127
H+I+ K VE +RA+P+ E+ P+ +KLFVG L IT +D YF +FGE++
Sbjct: 167 IN-HSIEGKNVEIRRAIPKEEMTEEPKK----QKLFVGGLPKHITSDDFNNYFSEFGEIS 221
Query: 128 SVALVTEKETGKKRGFGFVEYNDYDPVDKACL-KGTHLVKGKKVDVKKALSKEE 180
L+TEK G +GFGF+ + D + V++ L + H++ GK+VD++ A S+ +
Sbjct: 222 EYNLLTEKN-GTIKGFGFICFKD-ESVNEIILNEQQHIILGKRVDIRIADSQNK 273
Score = 166 (63.5 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 34/84 (40%), Positives = 52/84 (61%)
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVT-SVALVTEKETGKKRGFGFVEYNDYDPVDKACL 159
K+FVG L + E LK+YF FGEV S+ + ++ K RGFGFV + D +D+ L
Sbjct: 107 KIFVGGLLKTSSNEILKDYFSNFGEVKESIVIKATEKASKSRGFGFVTFVDPSVIDEVIL 166
Query: 160 KGTHLVKGKKVDVKKALSKEEMAK 183
H ++GK V++++A+ KEEM +
Sbjct: 167 IN-HSIEGKNVEIRRAIPKEEMTE 189
>UNIPROTKB|F1SHL4 [details] [associations]
symbol:F1SHL4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104347 InterPro:IPR012956 Pfam:PF08143
EMBL:CU468866 Ensembl:ENSSSCT00000002164 OMA:QYGTIVE Uniprot:F1SHL4
Length = 280
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 60/181 (33%), Positives = 104/181 (57%)
Query: 1 ITKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSA 60
++K E K+F+G L + + LK++F +G+V+D + DP T +SRGFGF+ A
Sbjct: 64 VSKNVEEEGKMFVGDLSWSNRKKDLKNYFTKFGEVIDCTIKMDPNTGRSRGFGFVLIKDA 123
Query: 61 HMVDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYF 120
V+ + H ++ V++P++A + N P VKK+FVG L + TE++ F
Sbjct: 124 ASVEKILDQKEHRLNGDVIDPEKA--KVMKNDP-----VKKIFVG-LNPEATEKNRD--F 173
Query: 121 GQFGEVTSVALVTEKETGKKRGFGFVEYNDYD-PVDKACLKGTHLVKGKKVDVKKALSKE 179
G+FGE+ ++ L + ++ K+RGF F+ + + + PV K K H + G+K ++K A KE
Sbjct: 174 GEFGEIEAIELPMDPKSNKRRGFVFITFKEEEEPVKKVLEKKFHTISGRKCEIKVAQPKE 233
Query: 180 E 180
+
Sbjct: 234 D 234
>UNIPROTKB|L7N074 [details] [associations]
symbol:L7N074 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA]
GeneTree:ENSGT00550000074566 EMBL:AAEX03002768
Ensembl:ENSCAFT00000009744 Uniprot:L7N074
Length = 204
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 53/101 (52%), Positives = 70/101 (69%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFI L + T++ +L++ E WG + + +VM+DP TK SRGFGF+TY++
Sbjct: 8 KEPEQLRKLFIRVLSFETTNRSLRNPLEQWGTLTNCMVMRDPDTKCSRGFGFVTYATVEE 67
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLF 103
VD A RPH +D +VVE KRAV R + RP A TVKK+F
Sbjct: 68 VDPAMNTRPHKVDGRVVETKRAVSREDSQRPGAHLTVKKIF 108
Score = 134 (52.2 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 29/88 (32%), Positives = 49/88 (55%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ ++KLF+ L + T L+ Q+G +T+ ++ + +T RGFGFV Y +
Sbjct: 7 PKEPEQLRKLFIRVLSFETTNRSLRNPLEQWGTLTNCMVMRDPDTKCSRGFGFVTYATVE 66
Query: 153 PVDKACLKGTHLVKGKKVDVKKALSKEE 180
VD A H V G+ V+ K+A+S+E+
Sbjct: 67 EVDPAMNTRPHKVDGRVVETKRAVSRED 94
>UNIPROTKB|J3KQA8 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AC078778 HGNC:HGNC:5031 ChiTaRS:HNRNPA1
ProteinModelPortal:J3KQA8 Ensembl:ENST00000420780 Uniprot:J3KQA8
Length = 102
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 51/89 (57%), Positives = 65/89 (73%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRKLFIGGL + T+ E+L+SHFE WG + D VVM+DP TK+SRGFGF+TY++
Sbjct: 8 KEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE 67
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEIN 91
VD A ARPH +D +VVE + T I+
Sbjct: 68 VDAAMNARPHKVDGRVVEATMILGITTIS 96
Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 29/84 (34%), Positives = 46/84 (54%)
Query: 93 PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYD 152
P+ ++KLF+G L + T+E L+ +F Q+G +T ++ + T + RGFGFV Y +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 153 PVDKACLKGTHLVKGKKVDVKKAL 176
VD A H V G+ V+ L
Sbjct: 67 EVDAAMNARPHKVDGRVVEATMIL 90
>UNIPROTKB|J3KTC1 [details] [associations]
symbol:MSI2 "RNA-binding protein Musashi homolog 2"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
HGNC:HGNC:18585 ChiTaRS:MSI2 EMBL:AC005325 EMBL:AC007431
EMBL:AC015883 EMBL:AC091181 Ensembl:ENST00000579590 Uniprot:J3KTC1
Length = 141
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 51/119 (42%), Positives = 80/119 (67%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+FIGGL ++TS ++L+ +F +G++ + +VM+DP TK+SRGFGF+T++ VD
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 77
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTS 128
H +DSK ++PK A PR +P+ KK+FVG L + ED+K+YF QFG+V++
Sbjct: 78 PHHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVSA 134
Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 29/87 (33%), Positives = 47/87 (54%)
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLK 160
K+F+G L + + L++YF +FGE+ ++ + T + RGFGFV + D VDK +
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 77
Query: 161 GTHLVKGKKVDVKKALSKEEMAKLKTR 187
H + K +D K A + K+ TR
Sbjct: 78 PHHELDSKTIDPKVAFPRRAQPKMVTR 104
>UNIPROTKB|D6RAF8 [details] [associations]
symbol:HNRNPD "Heterogeneous nuclear ribonucleoprotein D0"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0043488 "regulation of mRNA stability" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005829 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0048255 HOGENOM:HOG000234441 EMBL:AC124016
HGNC:HGNC:5036 ChiTaRS:HNRNPD InterPro:IPR012956 Pfam:PF08143
IPI:IPI00965952 ProteinModelPortal:D6RAF8 SMR:D6RAF8
Ensembl:ENST00000507010 ArrayExpress:D6RAF8 Bgee:D6RAF8
Uniprot:D6RAF8
Length = 221
Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 55/130 (42%), Positives = 79/130 (60%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+FIGGL + T+ + LK +F +G+VVD + DP T +SRGFGF+ + + VD
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
+ H ++ KV++PKRA + P VKK+FVG L D EE ++EYFG FGEV S+
Sbjct: 158 KEHKLNGKVIDPKRA-KAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 211
Query: 130 ALVTEKETGK 139
L + +T K
Sbjct: 212 ELPMDNKTNK 221
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 36/85 (42%), Positives = 52/85 (61%)
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLK 160
K+F+G L D T++DLK+YF +FGEV L + TG+ RGFGFV + + + VDK +
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157
Query: 161 GTHLVKGKKVDVK--KALSKEEMAK 183
H + GK +D K KA+ +E K
Sbjct: 158 KEHKLNGKVIDPKRAKAMKTKEPVK 182
>UNIPROTKB|J9PBP6 [details] [associations]
symbol:MSI1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104255 EMBL:AAEX03014735
Ensembl:ENSCAFT00000045257 OMA:LAQTRHE Uniprot:J9PBP6
Length = 471
Score = 275 (101.9 bits), Expect = 1.6e-23, P = 1.6e-23
Identities = 69/171 (40%), Positives = 96/171 (56%)
Query: 22 SETLKSHFEAWGDVVDVVVMKDPQTKKSR--GFGFITYSSAHMVDDAQAARPHTIDSKVV 79
+E L+ +F +G+V + +VM+DP TK+SR GFGF+T+ VD A H +DSK V
Sbjct: 120 TEGLREYFGQFGEVKECLVMRDPLTKRSRCRGFGFVTFMDQAGVDKVLAQSRHELDSKTV 179
Query: 80 E--PKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFG--EVTSVALVTEK 135
+ PK A PR + + KK+FVG L + T ED+K+YF QF +V L+ +K
Sbjct: 180 QIDPKVAFPRRAQPKVQMVTRTKKIFVGGLSVNTTVEDVKQYFEQFEKVQVDDAMLMFDK 239
Query: 136 ETGKKRG--FGFVEYNDYDPVDKACLKGTHLVKGKKVDV--KKALSKEEMA 182
T + RG FGFV + D V+K C H + K V V KKA KE M+
Sbjct: 240 TTNRHRGVGFGFVTFESEDIVEKVCEIHFHEINNKMVQVECKKAQPKEVMS 290
Score = 134 (52.2 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 34/95 (35%), Positives = 54/95 (56%)
Query: 9 RKLFIGGLDYRTSSETLKSHFEAWGDVV--DVVVMKDPQTKKSRG--FGFITYSSAHMVD 64
+K+F+GGL T+ E +K +FE + V D ++M D T + RG FGF+T+ S +V+
Sbjct: 202 KKIFVGGLSVNTTVEDVKQYFEQFEKVQVDDAMLMFDKTTNRHRGVGFGFVTFESEDIVE 261
Query: 65 DAQAARPHTIDSKVV--EPKRAVPRTEINRPEAGA 97
H I++K+V E K+A P+ E+ P A
Sbjct: 262 KVCEIHFHEINNKMVQVECKKAQPK-EVMSPTGSA 295
Score = 119 (46.9 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 28/79 (35%), Positives = 42/79 (53%)
Query: 111 ITEEDLKEYFGQFGEVTSVALVTEKETGKKR--GFGFVEYNDYDPVDKACLKGTHLVKGK 168
+ E L+EYFGQFGEV ++ + T + R GFGFV + D VDK + H + K
Sbjct: 118 VVTEGLREYFGQFGEVKECLVMRDPLTKRSRCRGFGFVTFMDQAGVDKVLAQSRHELDSK 177
Query: 169 --KVDVKKALSKEEMAKLK 185
++D K A + K++
Sbjct: 178 TVQIDPKVAFPRRAQPKVQ 196
>UNIPROTKB|I3LJN1 [details] [associations]
symbol:I3LJN1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0051170 "nuclear import" evidence=IEA] [GO:0051168 "nuclear
export" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005737 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0005844 InterPro:IPR021662 Pfam:PF11627
GeneTree:ENSGT00550000074566 EMBL:CU407216
Ensembl:ENSSSCT00000027879 Uniprot:I3LJN1
Length = 207
Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 56/108 (51%), Positives = 69/108 (63%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE KLFIGGL + T+ E L+SH E WG + D VM+ P TK+SRGFGF+TY++
Sbjct: 8 KEPE--LKLFIGGLSFETTDEGLRSHSEPWGTLTDHAVMRGPNTKRSRGFGFVTYATVGE 65
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDD 110
VD A ARPH +D +VVEPKR V R + RP A +KK G D
Sbjct: 66 VDAAMNARPHKVDGRVVEPKR-VSREDSQRPGAHVALKKTLSGRSYSD 112
Score = 124 (48.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 29/80 (36%), Positives = 45/80 (56%)
Query: 101 KLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLK 160
KLF+G L + T+E L+ + +G +T A++ T + RGFGFV Y VD A
Sbjct: 13 KLFIGGLSFETTDEGLRSHSEPWGTLTDHAVMRGPNTKRSRGFGFVTYATVGEVDAAMNA 72
Query: 161 GTHLVKGKKVDVKKALSKEE 180
H V G+ V+ K+ +S+E+
Sbjct: 73 RPHKVDGRVVEPKR-VSRED 91
>TAIR|locus:2115169 [details] [associations]
symbol:AT4G36960 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724 KO:K14411
HSSP:Q14103 UniGene:At.4642 UniGene:At.4643 EMBL:AY048286
EMBL:BT000573 IPI:IPI00527793 RefSeq:NP_001154290.1
RefSeq:NP_568011.1 ProteinModelPortal:Q94AC3 SMR:Q94AC3
IntAct:Q94AC3 PaxDb:Q94AC3 PRIDE:Q94AC3 EnsemblPlants:AT4G36960.1
EnsemblPlants:AT4G36960.2 GeneID:829850 KEGG:ath:AT4G36960
TAIR:At4g36960 HOGENOM:HOG000070627 InParanoid:Q94AC3 OMA:EITDLYM
PhylomeDB:Q94AC3 ProtClustDB:CLSN2689792 Genevestigator:Q94AC3
Uniprot:Q94AC3
Length = 379
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 54/172 (31%), Positives = 100/172 (58%)
Query: 9 RKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQA 68
RKL + G+ + S+ LK + +GD+ D +VMKD T +SRGFG++T++SA +A
Sbjct: 3 RKLVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASAEDAKNALK 62
Query: 69 ARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTS 128
H + ++++E K A P+ E+ +P T ++FV + ++E D + +F ++GE+T
Sbjct: 63 GE-HFLGNRILEVKVATPKEEMRQPAKKVT--RIFVARIPSSVSESDFRSHFERYGEITD 119
Query: 129 VALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEE 180
+ + + + + RG GF+ ++ D V+ ++ TH + G V V +A KE+
Sbjct: 120 LYMPKDYNSKQHRGIGFITFSSADSVEDL-MEDTHDLGGTTVAVDRATPKED 170
Score = 142 (55.0 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 33/91 (36%), Positives = 52/91 (57%)
Query: 100 KKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACL 159
+KL V + DI + LK+Y +FG++ ++ ++ TG+ RGFG+V + + A L
Sbjct: 3 RKLVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASAEDAKNA-L 61
Query: 160 KGTHLVKGKKVDVKKALSKEEM---AKLKTR 187
KG H + + ++VK A KEEM AK TR
Sbjct: 62 KGEHFLGNRILEVKVATPKEEMRQPAKKVTR 92
Score = 136 (52.9 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 32/89 (35%), Positives = 47/89 (52%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K+F+G L S + L+ +F +G + D + KDP+ RGFGF+T++ + V D A
Sbjct: 241 KIFVGRLPQEASVDDLRDYFGRFGHIQDAYIPKDPKRSGHRGFGFVTFAE-NGVADRVAR 299
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGAT 98
R H I + V A P E P AGA+
Sbjct: 300 RSHEICGQEVAIDSATPLDEAG-PSAGAS 327
Score = 124 (48.7 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 28/97 (28%), Positives = 49/97 (50%)
Query: 86 PRTEINR--PEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGF 143
P T R P K+FVG L + + +DL++YFG+FG + + + + RGF
Sbjct: 224 PATFYGRGEPTTRGIGNKIFVGRLPQEASVDDLRDYFGRFGHIQDAYIPKDPKRSGHRGF 283
Query: 144 GFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEE 180
GFV + + D+ + +H + G++V + A +E
Sbjct: 284 GFVTFAENGVADRVARR-SHEICGQEVAIDSATPLDE 319
>UNIPROTKB|F1PW36 [details] [associations]
symbol:F1PW36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00550000074566 EMBL:AAEX03009913
ProteinModelPortal:F1PW36 Ensembl:ENSCAFT00000009888 Uniprot:F1PW36
Length = 230
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 58/170 (34%), Positives = 97/170 (57%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
KLFIG L + T++ET WG + D +VM+DP TK F+T ++ VD A
Sbjct: 1 KLFIGDLSFETTNET-------WGMLSDFLVMRDPNTKH----WFVTCATVDKVDAAMTP 49
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
RP +D +V EPK AV R + + A TVK++FV +++D E L++YF +G+
Sbjct: 50 RPQKVDGRVEEPKTAVSREDSQKHGAHLTVKRIFVDGIKEDTEEYRLRDYFEPYGKTEVN 109
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKE 179
++T++ + KK GF ++D+D V K ++ +H G+ V++ L+++
Sbjct: 110 DIMTDQGSSKKTGFALT-FDDHDSVHKTGIQKSHTANGQNCKVRRVLARK 158
>UNIPROTKB|F1M108 [details] [associations]
symbol:F1M108 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00190264
Ensembl:ENSRNOT00000023750 Uniprot:F1M108
Length = 294
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 68/158 (43%), Positives = 89/158 (56%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEP L KLFI GL +L+SHFE G + VVM+DP TK+SRGFGF+T
Sbjct: 8 KEPGQLWKLFIRGL-------SLRSHFEQRGTLPGCVVMRDPNTKRSRGFGFVT-----K 55
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A A+PH +D VV PKRAV R A TVK+ G ++ ED E+
Sbjct: 56 VDAAMKAKPHKVDGGVVGPKRAVSEHS-QRAGAHLTVKESSAGGVK-----EDTGEHHRL 109
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLK 160
FG V ++T + +GKKR FV +++YD VDK ++
Sbjct: 110 FGTVWE-NIMTVRGSGKKRDVAFVTFDEYDSVDKIVIQ 146
>WB|WBGene00022235 [details] [associations]
symbol:sqd-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000003
"reproduction" evidence=IMP] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0000003 GO:GO:0003676 EMBL:FO081731
eggNOG:COG0724 GeneTree:ENSGT00700000104255 KO:K03102
RefSeq:NP_001023574.1 ProteinModelPortal:Q4W5P0 SMR:Q4W5P0
STRING:Q4W5P0 PaxDb:Q4W5P0 PRIDE:Q4W5P0 EnsemblMetazoa:Y73B6BL.6b.1
EnsemblMetazoa:Y73B6BL.6b.2 EnsemblMetazoa:Y73B6BL.6b.3
EnsemblMetazoa:Y73B6BL.6b.4 EnsemblMetazoa:Y73B6BL.6b.5
EnsemblMetazoa:Y73B6BL.6b.6 EnsemblMetazoa:Y73B6BL.6b.7
EnsemblMetazoa:Y73B6BL.6b.8 GeneID:177392 KEGG:cel:CELE_Y73B6BL.6
UCSC:Y73B6BL.6a.7 CTD:177392 WormBase:Y73B6BL.6b
HOGENOM:HOG000017794 InParanoid:Q4W5P0 OMA:GHQTGYK NextBio:896614
ArrayExpress:Q4W5P0 Uniprot:Q4W5P0
Length = 308
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 61/175 (34%), Positives = 92/175 (52%)
Query: 2 TKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAH 61
TK E +K+F+GG+ ++E L SHF +G+V V D +SRGF F+ +++
Sbjct: 23 TKGNED-KKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGE 81
Query: 62 MVDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFG 121
A AAR TI K VE K A R KK+FVG L D +E+DL+ +F
Sbjct: 82 GCKLALAAREQTIKGKSVEVKPAKSREN----------KKVFVGGLPSDYSEQDLRSHFE 131
Query: 122 QFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKAL 176
QFG+V + +K+T +R F F+ + + + DKA + ++ DVKKA+
Sbjct: 132 QFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAV 186
Score = 154 (59.3 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 30/80 (37%), Positives = 45/80 (56%)
Query: 100 KKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACL 159
KK+FVG + ++ EDL +F Q+GEV + ++ G+ RGF FVE+ + A
Sbjct: 29 KKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALA 88
Query: 160 KGTHLVKGKKVDVKKALSKE 179
+KGK V+VK A S+E
Sbjct: 89 AREQTIKGKSVEVKPAKSRE 108
Score = 139 (54.0 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 9 RKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQA 68
+K+F+GGL S + L+SHFE +G V D+ D QTK R F FI + D A +
Sbjct: 110 KKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASS 169
Query: 69 ARPHTIDSKVVEPKRAVPR 87
T ++ + K+AVP+
Sbjct: 170 QTKQTFGTRECDVKKAVPQ 188
>UNIPROTKB|F1SP49 [details] [associations]
symbol:F1SP49 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00700000104376
EMBL:FP016004 Ensembl:ENSSSCT00000005972 OMA:SHTANGH
ArrayExpress:F1SP49 Uniprot:F1SP49
Length = 162
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 44/81 (54%), Positives = 58/81 (71%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE LRK+F+GGL + T+ E L+SH E WG + D VV +DP TK+SRGF F+TY++
Sbjct: 15 KEPEQLRKVFLGGLSFETTDERLRSHSEQWGTLTDCVVRRDPNTKRSRGFRFVTYTTVEE 74
Query: 63 VDDAQAARPHTIDSKVVEPKR 83
VD A RPH +D +VVEP +
Sbjct: 75 VDTAMNTRPHKVDGRVVEPSQ 95
Score = 116 (45.9 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 27/94 (28%), Positives = 49/94 (52%)
Query: 78 VVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKET 137
++ P + ++E P+ ++K+F+G L + T+E L+ + Q+G +T + + T
Sbjct: 1 ILLPTTIMSKSE--SPKEPEQLRKVFLGGLSFETTDERLRSHSEQWGTLTDCVVRRDPNT 58
Query: 138 GKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVD 171
+ RGF FV Y + VD A H V G+ V+
Sbjct: 59 KRSRGFRFVTYTTVEEVDTAMNTRPHKVDGRVVE 92
>UNIPROTKB|D6RF44 [details] [associations]
symbol:HNRNPD "Heterogeneous nuclear ribonucleoprotein D0"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0043488 "regulation of mRNA stability" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005829 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0048255 HOGENOM:HOG000234441 EMBL:AC124016
HGNC:HGNC:5036 ChiTaRS:HNRNPD IPI:IPI00967562
ProteinModelPortal:D6RF44 SMR:D6RF44 Ensembl:ENST00000515432
ArrayExpress:D6RF44 Bgee:D6RF44 Uniprot:D6RF44
Length = 112
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 51/118 (43%), Positives = 72/118 (61%)
Query: 11 LFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAAR 70
+FIGGL + T+ + LK +F +G+VVD + DP T +SRGFGF+ + + VD +
Sbjct: 1 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQK 60
Query: 71 PHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTS 128
H ++ KV++PKRA + P VKK+FVG L D EE ++EYFG FGEV S
Sbjct: 61 EHKLNGKVIDPKRA-KAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVES 112
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 35/84 (41%), Positives = 51/84 (60%)
Query: 102 LFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKG 161
+F+G L D T++DLK+YF +FGEV L + TG+ RGFGFV + + + VDK +
Sbjct: 1 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQK 60
Query: 162 THLVKGKKVDVK--KALSKEEMAK 183
H + GK +D K KA+ +E K
Sbjct: 61 EHKLNGKVIDPKRAKAMKTKEPVK 84
>RGD|1563684 [details] [associations]
symbol:Hnrnpa0 "heterogeneous nuclear ribonucleoprotein A0"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0006954 "inflammatory response" evidence=ISO]
[GO:0017091 "AU-rich element binding" evidence=ISO] [GO:0019901
"protein kinase binding" evidence=ISO] [GO:0032496 "response to
lipopolysaccharide" evidence=ISO] [GO:0070935 "3'-UTR-mediated mRNA
stabilization" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
REFSEQ:XM_003752953 Ncbi:XP_003753001
Length = 226
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 48/98 (48%), Positives = 67/98 (68%)
Query: 84 AVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSVALVTEKETGKKRGF 143
AV R + RP A A VKKLFVG L+ D+ E DL E+F QFG V ++ +K++GKKRGF
Sbjct: 1 AVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGAVEKAEIIADKQSGKKRGF 60
Query: 144 GFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEM 181
GFV + +D DKA + H ++G +V+VKKA+ KE++
Sbjct: 61 GFVYFQSHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 98
Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 33/90 (36%), Positives = 48/90 (53%)
Query: 8 LRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQ 67
++KLF+GGL + L HF +G V ++ D Q+ K RGFGF+ + S D A
Sbjct: 16 VKKLFVGGLKGDVAEGDLIEHFSQFGAVEKAEIIADKQSGKKRGFGFVYFQSHDAADKAA 75
Query: 68 AARPHTIDSKVVEPKRAVPRTEINRPEAGA 97
+ H I VE K+AVP+ +I+ GA
Sbjct: 76 VVKFHPIQGHRVEVKKAVPKEDIHAGGGGA 105
>UNIPROTKB|F1PJ22 [details] [associations]
symbol:F1PJ22 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662 Pfam:PF11627
GeneTree:ENSGT00550000074566 EMBL:AAEX03017137
Ensembl:ENSCAFT00000029502 Uniprot:F1PJ22
Length = 204
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 58/132 (43%), Positives = 79/132 (59%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KEPE L KLFI GL + T++E+L+ E WG ++ V + +DP TK SRGF +TY+
Sbjct: 8 KEPEQLHKLFIRGLGFETTNESLRRLCEQWG-MLGVAI-RDPNTKCSRGF--VTYAPVEE 63
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFV--GSLRDDITEEDLKEYF 120
VD A ARPH +D +VVEPKRAV R + RP A +K ++ GS D +L F
Sbjct: 64 VDAAMDARPHKVDGRVVEPKRAVSREDSQRPGAHCKERKPYLSGGSCNDSGNYNNLSSNF 123
Query: 121 G----QFGEVTS 128
G +FG+ +S
Sbjct: 124 GPMKGKFGDRSS 135
>TAIR|locus:2122009 [details] [associations]
symbol:RBP31 "AT4G24770" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=ISS;IDA;TAS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0045087 "innate
immune response" evidence=IDA] [GO:0008266 "poly(U) RNA binding"
evidence=IDA] [GO:0009451 "RNA modification" evidence=IMP]
[GO:0009073 "aromatic amino acid family biosynthetic process"
evidence=RCA] [GO:0009965 "leaf morphogenesis" evidence=RCA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=RCA]
[GO:0030154 "cell differentiation" evidence=RCA] [GO:0045036
"protein targeting to chloroplast" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0009631 "cold acclimation" evidence=IMP] [GO:0016553 "base
conversion or substitution editing" evidence=IMP] [GO:0043489 "RNA
stabilization" evidence=IMP] [GO:0006396 "RNA processing"
evidence=TAS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0009570 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0008266 GO:GO:0000166 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0045087 GO:GO:0009941 GO:GO:0009631
GO:GO:0016553 GO:GO:0006396 GO:GO:0030529 EMBL:AL035356
EMBL:AL161562 GO:GO:0009535 eggNOG:COG0724 HOGENOM:HOG000276232
EMBL:M94554 EMBL:X65255 EMBL:U08467 EMBL:D31712 EMBL:D31713
IPI:IPI00523699 IPI:IPI00542634 IPI:IPI00760320 PIR:S28057
PIR:S53492 RefSeq:NP_194208.1 UniGene:At.38112 UniGene:At.70990
ProteinModelPortal:Q04836 SMR:Q04836 STRING:Q04836 PaxDb:Q04836
PRIDE:Q04836 ProMEX:Q04836 EnsemblPlants:AT4G24770.1 GeneID:828579
KEGG:ath:AT4G24770 GeneFarm:4009 TAIR:At4g24770 InParanoid:Q04836
OMA:NRYDLNG PhylomeDB:Q04836 ProtClustDB:CLSN2915857
Genevestigator:Q04836 GermOnline:AT4G24770 GO:GO:0043489
Uniprot:Q04836
Length = 329
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 63/182 (34%), Positives = 102/182 (56%)
Query: 4 EPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMV 63
EP KLF+G L Y +S+ L FE G V V+ + +T +SRGFGF+T SS V
Sbjct: 145 EPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSS---V 201
Query: 64 DDAQAA----RPHTIDSKVVEPKRAVPRTEINRPEAGATVK----KLFVGSLRDDITEED 115
D+A+ A + ++ +++ +A PR +RPE V +++VG+L D+
Sbjct: 202 DEAETAVEKFNRYDLNGRLLTVNKAAPRG--SRPERAPRVYEPAFRVYVGNLPWDVDNGR 259
Query: 116 LKEYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKA--CLKGTHLVKGKKVDVK 173
L++ F + G+V +V ++ETG+ RGFGFV +D D +++A L G +L +G+ + V
Sbjct: 260 LEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNL-EGRAIRVN 318
Query: 174 KA 175
A
Sbjct: 319 VA 320
>UNIPROTKB|H0YHB7 [details] [associations]
symbol:MSI1 "RNA-binding protein Musashi homolog 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AC003982 HGNC:HGNC:7330 Ensembl:ENST00000546985 Uniprot:H0YHB7
Length = 233
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 51/120 (42%), Positives = 69/120 (57%)
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD A H +DSK ++PK A PR +P+ KK+FVG L + T ED+K+YF Q
Sbjct: 6 VDKVLAQSRHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQ 63
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
FG+V L+ +K T + RGFGFV + D V+K C H + K V+ KKA KE M+
Sbjct: 64 FGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMS 123
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 35/89 (39%), Positives = 55/89 (61%)
Query: 9 RKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQA 68
+K+F+GGL T+ E +K +FE +G V D ++M D T + RGFGF+T+ S +V+
Sbjct: 41 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 100
Query: 69 ARPHTIDSKVVEPKRAVPRTEINRPEAGA 97
H I++K+VE K+A P+ E+ P A
Sbjct: 101 IHFHEINNKMVECKKAQPK-EVMSPTGSA 128
>GENEDB_PFALCIPARUM|PFD0700c [details] [associations]
symbol:PFD0700c "RNA binding protein, putative"
species:5833 "Plasmodium falciparum" [GO:0016070 "RNA metabolic
process" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0016070 EMBL:AL844503
HSSP:Q14103 RefSeq:XP_001351452.1 ProteinModelPortal:Q8I1U3
EnsemblProtists:PFD0700c:mRNA GeneID:812564 KEGG:pfa:PFD0700c
EuPathDB:PlasmoDB:PF3D7_0414500 HOGENOM:HOG000282694
ProtClustDB:CLSZ2431852 Uniprot:Q8I1U3
Length = 358
Score = 235 (87.8 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 57/176 (32%), Positives = 95/176 (53%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K FIGG+ +S+ + +FE +G V VV+ +D +TK++RGF F+T +S H+ +
Sbjct: 115 KFFIGGIPQYITSKHITEYFEQYGTVQHVVIAQDHETKRNRGFAFVTMAS-HINKERILR 173
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
H ++ K V+ + E N +K+FVG L T++ L+ YF FGE+ V
Sbjct: 174 DTHELNGKRVDVR------EENNTTPSDIQRKIFVGGLNYYWTKDTLESYFSTFGEIDVV 227
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMAKLK 185
+V + +G+ R FGFV +++ + V K H + K V+V+KA K+ +K
Sbjct: 228 QIVLDS-SGRSRCFGFVVFSNENSVAKVLKHKRHKIYDKMVEVRKAEPKKPKMSIK 282
Score = 142 (55.0 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 9 RKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQA 68
RK+F+GGL+Y + +TL+S+F +G++ DVV + + +SR FGF+ +S+ + V
Sbjct: 198 RKIFVGGLNYYWTKDTLESYFSTFGEI-DVVQIVLDSSGRSRCFGFVVFSNENSVAKVLK 256
Query: 69 ARPHTIDSKVVEPKRAVPR 87
+ H I K+VE ++A P+
Sbjct: 257 HKRHKIYDKMVEVRKAEPK 275
>UNIPROTKB|Q8I1U3 [details] [associations]
symbol:PFD0700c "RNA binding protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0016070 "RNA
metabolic process" evidence=ISS] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0016070
EMBL:AL844503 HSSP:Q14103 RefSeq:XP_001351452.1
ProteinModelPortal:Q8I1U3 EnsemblProtists:PFD0700c:mRNA
GeneID:812564 KEGG:pfa:PFD0700c EuPathDB:PlasmoDB:PF3D7_0414500
HOGENOM:HOG000282694 ProtClustDB:CLSZ2431852 Uniprot:Q8I1U3
Length = 358
Score = 235 (87.8 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 57/176 (32%), Positives = 95/176 (53%)
Query: 10 KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQAA 69
K FIGG+ +S+ + +FE +G V VV+ +D +TK++RGF F+T +S H+ +
Sbjct: 115 KFFIGGIPQYITSKHITEYFEQYGTVQHVVIAQDHETKRNRGFAFVTMAS-HINKERILR 173
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
H ++ K V+ + E N +K+FVG L T++ L+ YF FGE+ V
Sbjct: 174 DTHELNGKRVDVR------EENNTTPSDIQRKIFVGGLNYYWTKDTLESYFSTFGEIDVV 227
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMAKLK 185
+V + +G+ R FGFV +++ + V K H + K V+V+KA K+ +K
Sbjct: 228 QIVLDS-SGRSRCFGFVVFSNENSVAKVLKHKRHKIYDKMVEVRKAEPKKPKMSIK 282
Score = 142 (55.0 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 9 RKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQA 68
RK+F+GGL+Y + +TL+S+F +G++ DVV + + +SR FGF+ +S+ + V
Sbjct: 198 RKIFVGGLNYYWTKDTLESYFSTFGEI-DVVQIVLDSSGRSRCFGFVVFSNENSVAKVLK 256
Query: 69 ARPHTIDSKVVEPKRAVPR 87
+ H I K+VE ++A P+
Sbjct: 257 HKRHKIYDKMVEVRKAEPK 275
>FB|FBgn0036496 [details] [associations]
symbol:CG7804 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 EMBL:AE014296 GO:GO:0000166
GO:GO:0003729 Gene3D:3.30.70.330 HSSP:P09651 eggNOG:NOG145464
GeneTree:ENSGT00570000079202 EMBL:AY118452 RefSeq:NP_648764.1
UniGene:Dm.13628 SMR:Q9VUN2 EnsemblMetazoa:FBtr0075617
EnsemblMetazoa:FBtr0332815 GeneID:39665 KEGG:dme:Dmel_CG7804
UCSC:CG7804-RA FlyBase:FBgn0036496 InParanoid:Q9VUN2 OMA:EPKHNNS
OrthoDB:EOG43XSK6 GenomeRNAi:39665 NextBio:814765 Uniprot:Q9VUN2
Length = 318
Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 68/187 (36%), Positives = 97/187 (51%)
Query: 2 TKEPE-HLR--KLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYS 58
TK E HLR L + GL Y T+ + L+ +FE +GDVV + KD ++ S+GFGF+ +
Sbjct: 97 TKRTEAHLRCFDLIVLGLSYNTTEQDLREYFETYGDVVKAEIKKDTRSGHSKGFGFVRFG 156
Query: 59 SAHMVDDAQAARPHTIDSKVVEPKRAVPRTE-INRPEAGATVKKLFVGSLRDDITEEDLK 117
S + V ++ H+ID + E K VP + + E G K+FVG +DI +DL+
Sbjct: 157 S-YDVQMHVLSKRHSIDGRWCEVK--VPASRGMGNQEPG----KVFVGRCTEDIEADDLR 209
Query: 118 EYFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDP-VDKACLKGTHLVKGKKVDVKKAL 176
EYF +FGEV V + K R F FV + DP V + H++KG V V A
Sbjct: 210 EYFSKFGEVIDVFI--PKPF---RAFSFVTF--LDPYVPRVVCGEKHIIKGVSVHVSTAD 262
Query: 177 SKEEMAK 183
K K
Sbjct: 263 KKNVQNK 269
>FB|FBgn0025790 [details] [associations]
symbol:TBPH "TAR DNA-binding protein-43 homolog" species:7227
"Drosophila melanogaster" [GO:0003729 "mRNA binding" evidence=ISS]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0008344 "adult locomotory
behavior" evidence=IMP] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0007417 "central nervous system
development" evidence=IMP] [GO:0045886 "negative regulation of
synaptic growth at neuromuscular junction" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 GO:GO:0007528 GO:GO:0003729
Gene3D:3.30.70.330 GO:GO:0008344 GO:GO:0045886 EMBL:AB010261
HSSP:Q61474 eggNOG:NOG145464 EMBL:AB019705 EMBL:AB019706 SMR:O97468
IntAct:O97468 STRING:O97468 UCSC:CG10327-RC FlyBase:FBgn0025790
InParanoid:O97468 OrthoDB:EOG4QNKC2 Uniprot:O97468
Length = 531
Score = 229 (85.7 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 63/174 (36%), Positives = 91/174 (52%)
Query: 11 LFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMVDDAQA-- 68
L + GL ++T+ E+L+ +FE +G+V+ + KD ++ +S+GFGF+ + S DAQ
Sbjct: 109 LIVLGLPWKTTEESLREYFETYGEVLMAQIKKDTKSGQSKGFGFVRFGSY----DAQMRV 164
Query: 69 -ARPHTIDSKVVEPKRAVPRTEINRPEAGATVK-KLFVGSLRDDITEEDLKEYFGQFGEV 126
H ID + E K VP N G V K+FVG +DI +DL+EYF +FGEV
Sbjct: 165 LTNRHLIDGRWCEVK--VP----NSKGMGHQVPCKVFVGRCTEDINSDDLREYFSKFGEV 218
Query: 127 TSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEE 180
T V + R F FV + D D C + H++KG V V A K E
Sbjct: 219 TDVFIPRPF-----RAFSFVTFLDPDVAQSLCGED-HIIKGVSVHVSNAAPKAE 266
>UNIPROTKB|J9PBE1 [details] [associations]
symbol:J9PBE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 GeneTree:ENSGT00550000074566 EMBL:AAEX03009875
Ensembl:ENSCAFT00000009290 Uniprot:J9PBE1
Length = 342
Score = 222 (83.2 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 60/182 (32%), Positives = 91/182 (50%)
Query: 3 KEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHM 62
KE E L+KLFI GL + + E + A G VV+ D + S+ + SA
Sbjct: 8 KESEQLQKLFIRGLSFEKNREESEEPLRAMGRWWWGVVLMDCGNETSKHQP-LQRLSAEE 66
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD RP + RAV R + RP A ++KK F G +++D E L++YF
Sbjct: 67 VDAVMNVRPCKVGG------RAVSREDFQRPGAHLSMKKFFFGGIKEDTEEHHLRDYFKH 120
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEEMA 182
G+V + ++ ++ KKR F FV ++D+D VD +K H V G + +K LSK+ M
Sbjct: 121 KGKVEVIEIML-RQWQKKRDFAFVTFDDHDSVDTTFIKKYHNVNGHTWEARKVLSKQGMG 179
Query: 183 KL 184
+
Sbjct: 180 SV 181
>TAIR|locus:2157702 [details] [associations]
symbol:CP31B "chloroplast RNA-binding protein 31B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0045087 "innate immune response" evidence=IDA]
[GO:0008266 "poly(U) RNA binding" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0009451 "RNA modification"
evidence=IMP] [GO:0000023 "maltose metabolic process" evidence=RCA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009697 "salicylic acid
biosynthetic process" evidence=RCA] [GO:0009814 "defense response,
incompatible interaction" evidence=RCA] [GO:0010027 "thylakoid
membrane organization" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019684 "photosynthesis, light reaction"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009570 GO:GO:0008266 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0045087 GO:GO:0009941 EMBL:AB024031
eggNOG:COG0724 GO:GO:0009451 HOGENOM:HOG000276232 HSSP:P11940
ProtClustDB:CLSN2915857 UniGene:At.46085 UniGene:At.7917
EMBL:AY039868 EMBL:AY077660 IPI:IPI00537317 RefSeq:NP_199836.1
ProteinModelPortal:Q9FGS0 SMR:Q9FGS0 STRING:Q9FGS0 PaxDb:Q9FGS0
PRIDE:Q9FGS0 EnsemblPlants:AT5G50250.1 GeneID:835090
KEGG:ath:AT5G50250 TAIR:At5g50250 InParanoid:Q9FGS0 OMA:AAFRIYV
PhylomeDB:Q9FGS0 Genevestigator:Q9FGS0 Uniprot:Q9FGS0
Length = 289
Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 59/179 (32%), Positives = 95/179 (53%)
Query: 4 EPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAHMV 63
EP KLF+G L Y S+ L FE G V V+ + T +SRGFGF+T S+
Sbjct: 108 EPPEEAKLFVGNLPYDVDSQALAMLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEA 167
Query: 64 DDA-QAARPHTIDSKVVEPKRAVPRTEINRPEAGATVK----KLFVGSLRDDITEEDLKE 118
+ A + ++ + + RA PR +RPE V +++VG+L D+ L+
Sbjct: 168 EKAVEKFNSFEVNGRRLTVNRAAPRG--SRPERQPRVYDAAFRIYVGNLPWDVDSGRLER 225
Query: 119 YFGQFGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKA--CLKGTHLVKGKKVDVKKA 175
F + G+V +V+++ETG+ RGFGFV+ ++ + V+ A L G +L +G+ + V A
Sbjct: 226 LFSEHGKVVDARVVSDRETGRSRGFGFVQMSNENEVNVAIAALDGQNL-EGRAIKVNVA 283
>RGD|1309982 [details] [associations]
symbol:Hnrnpc "heterogeneous nuclear ribonucleoprotein C
(C1/C2)" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005681 "spliceosomal complex" evidence=IEA;ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=ISO] [GO:0045120 "pronucleus" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:1309982 GO:GO:0008380 GO:GO:0000166 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0003723 eggNOG:COG0724
HOGENOM:HOG000234441 HOVERGEN:HBG002295 EMBL:X16933 IPI:IPI00213609
PIR:S09017 UniGene:Rn.101929 ProteinModelPortal:P17132 SMR:P17132
STRING:P17132 PRIDE:P17132 UCSC:RGD:1309982 ArrayExpress:P17132
Genevestigator:P17132 GermOnline:ENSRNOG00000002292 Uniprot:P17132
Length = 158
Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 48/118 (40%), Positives = 69/118 (58%)
Query: 63 VDDAQAARPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQ 122
VD + H ++ KV++PKRA + P VKK+FVG L D EE ++EYFG
Sbjct: 3 VDKVMDQKEHKLNGKVIDPKRA-KAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGG 56
Query: 123 FGEVTSVALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEE 180
FGEV S+ L + +T K+RGF F+ + + +PV K K H V K ++K A+SKE+
Sbjct: 57 FGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQ 114
Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 28/93 (30%), Positives = 48/93 (51%)
Query: 2 TKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAH 61
TKEP ++K+F+GGL T E ++ +F +G+V + + D +T K RGF FIT+
Sbjct: 29 TKEP--VKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEE 86
Query: 62 MVDDAQAARPHTIDSKVVEPKRAVPRTEINRPE 94
V + H + E K A+ + + + +
Sbjct: 87 PVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQ 119
>UNIPROTKB|F5H6R6 [details] [associations]
symbol:HNRNPD "Heterogeneous nuclear ribonucleoprotein D0"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0043488 "regulation of mRNA stability" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005829 GO:GO:0005634
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0048255
EMBL:AC124016 HGNC:HGNC:5036 ChiTaRS:HNRNPD IPI:IPI01012829
ProteinModelPortal:F5H6R6 SMR:F5H6R6 Ensembl:ENST00000541060
ArrayExpress:F5H6R6 Bgee:F5H6R6 Uniprot:F5H6R6
Length = 201
Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 46/111 (41%), Positives = 67/111 (60%)
Query: 70 RPHTIDSKVVEPKRAVPRTEINRPEAGATVKKLFVGSLRDDITEEDLKEYFGQFGEVTSV 129
+ H ++ KV++PKRA + P VKK+FVG L D EE ++EYFG FGEV S+
Sbjct: 4 KEHKLNGKVIDPKRA-KAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 57
Query: 130 ALVTEKETGKKRGFGFVEYNDYDPVDKACLKGTHLVKGKKVDVKKALSKEE 180
L + +T K+RGF F+ + + +PV K K H V K ++K A+SKE+
Sbjct: 58 ELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQ 108
Score = 127 (49.8 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 28/93 (30%), Positives = 48/93 (51%)
Query: 2 TKEPEHLRKLFIGGLDYRTSSETLKSHFEAWGDVVDVVVMKDPQTKKSRGFGFITYSSAH 61
TKEP ++K+F+GGL T E ++ +F +G+V + + D +T K RGF FIT+
Sbjct: 23 TKEP--VKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEE 80
Query: 62 MVDDAQAARPHTIDSKVVEPKRAVPRTEINRPE 94
V + H + E K A+ + + + +
Sbjct: 81 PVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQ 113
WARNING: HSPs involving 1150 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.133 0.380 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 304 189 0.00089 110 3 11 22 0.49 32
31 0.42 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1400
No. of states in DFA: 578 (61 KB)
Total size of DFA: 145 KB (2089 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.04u 0.08s 20.12t Elapsed: 00:00:04
Total cpu time: 20.08u 0.08s 20.16t Elapsed: 00:00:04
Start: Thu Aug 15 12:20:40 2013 End: Thu Aug 15 12:20:44 2013
WARNINGS ISSUED: 2