AmiGO: BLAST Results


BLAST match view associations BLAST with tko tko tko technical knockout	protein from Drosophila melanogaster	1.7e-20
BLAST match view associations BLAST with MRPS12 MRPS12 MRPS12 28S ribosomal protein S12, mitochondrial	protein from Homo sapiens	1.4e-17
BLAST match view associations BLAST with MRPS12 MRPS12 MRPS12 Uncharacterized protein	protein from Gallus gallus	2.9e-17
BLAST match view associations BLAST with si:dkey-17e16.10 si:dkey-17e16.10 si:dkey-17e16.10	gene_product from Danio rerio	7.7e-16
BLAST match view associations BLAST with MRPS12 MRPS12 MRPS12 28S ribosomal protein S12, mitochondrial	protein from Bos taurus	1.8e-14
BLAST match view associations BLAST with Mrps12 Mrps12 Mrps12 mitochondrial ribosomal protein S12	protein from Mus musculus	3.8e-14
BLAST match view associations BLAST with Mrps12 Mrps12 Mrps12 mitochondrial ribosomal protein S12	gene from Rattus norvegicus	3.8e-14
BLAST match view associations BLAST with MRPS12 MRPS12 MRPS12 Uncharacterized protein	protein from Canis lupus familiaris	2.7e-13
BLAST match view associations BLAST with NSE_0689 NSE_0689 NSE_0689 ribosomal protein S12	protein from Neorickettsia sennetsu str. Miyayama	1.2e-12
BLAST match view associations BLAST with CJE_0540 CJE_0540 CJE_0540 ribosomal protein S12	protein from Campylobacter jejuni RM1221	1.5e-12
BLAST match view associations BLAST with APH_1035 APH_1035 APH_1035 ribosomal protein S12	protein from Anaplasma phagocytophilum str. HZ	1.9e-12
BLAST match view associations BLAST with ECH_0963 ECH_0963 ECH_0963 ribosomal protein S12	protein from Ehrlichia chaffeensis str. Arkansas	3.1e-12
BLAST match view associations BLAST with rpsL rpsL rpsL 30S ribosomal protein S12	protein from Mycobacterium tuberculosis	5.0e-12
BLAST match view associations BLAST with BA_0105 BA_0105 BA_0105 ribosomal protein S12	protein from Bacillus anthracis str. Ames	8.2e-12
BLAST match view associations BLAST with SPO_3501 SPO_3501 SPO_3501 ribosomal protein S12	protein from Ruegeria pomeroyi DSS-3	1.0e-11
BLAST match view associations BLAST with rps12-A rps12-A rps12-A 30S ribosomal protein S12, chloroplastic	protein from Oryza sativa	1.7e-11
BLAST match view associations BLAST with rps12-A rps12-A rps12-A 30S ribosomal protein S12, chloroplastic	protein from Oryza sativa Indica Group	1.7e-11
BLAST match view associations BLAST with rps12-A rps12-A rps12-A 30S ribosomal protein S12, chloroplastic	protein from Oryza sativa Japonica Group	1.7e-11
BLAST match view associations BLAST with rps12 rps12 rps12 30S ribosomal protein S12, chloroplastic	protein from Oryza nivara	1.7e-11
BLAST match view associations BLAST with DET_0470 DET_0470 DET_0470 ribosomal protein S12	protein from Dehalococcoides ethenogenes 195	2.2e-11
BLAST match view associations BLAST with SO_0226 SO_0226 SO_0226 ribosomal protein S12	protein from Shewanella oneidensis MR-1	4.5e-11
BLAST match view associations BLAST with orf19.2438 orf19.2438 orf19.2438	gene_product from Candida albicans	5.8e-11
BLAST match view associations BLAST with CBU_0233 CBU_0233 CBU_0233 ribosomal protein S12	protein from Coxiella burnetii RSA 493	7.4e-11
BLAST match view associations BLAST with rpsL rpsL rpsL	protein from Escherichia coli K-12	9.4e-11
BLAST match view associations BLAST with rpsL rpsL rpsL 30S ribosomal protein S12	protein from Vibrio cholerae O1 biovar El Tor str. N16961	9.4e-11
BLAST match view associations BLAST with CPS_4767 CPS_4767 CPS_4767 ribosomal protein S12	protein from Colwellia psychrerythraea 34H	9.4e-11
BLAST match view associations BLAST with VC_0359 VC_0359 VC_0359 ribosomal protein S12	protein from Vibrio cholerae O1 biovar El Tor	9.4e-11
BLAST match view associations BLAST with CHY_2315 CHY_2315 CHY_2315 ribosomal protein S12	protein from Carboxydothermus hydrogenoformans Z-2901	1.5e-10
BLAST match view associations BLAST with RPS12 RPS12 RPS12 Ribosomal protein S12, mitochondrial	protein from Oryza sativa Japonica Group	5.2e-10
BLAST match view associations BLAST with rps12 rps12 rps12 Ribosomal protein S12	protein from Oryza sativa Indica Group	5.2e-10
BLAST match view associations BLAST with rps12 rps12 rps12 Ribosomal protein S12	protein from Oryza sativa Japonica Group	5.2e-10
BLAST match view associations BLAST with MRPS12 MRPS12 MRPS12 Mitochondrial protein	gene from Saccharomyces cerevisiae	6.6e-10
BLAST match view associations BLAST with mrps-12 mrps-12 mrps-12	gene from Caenorhabditis elegans	5.9e-09
BLAST match view associations BLAST with mrps12 mrps12 mrps12 ribosomal protein S12, mitochondrial	gene from Dictyostelium discoideum	6.8e-08

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy16455
        (82 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

FB|FBgn0003714 - symbol:tko "technical knockout" species:...   242  1.7e-20   1
UNIPROTKB|O15235 - symbol:MRPS12 "28S ribosomal protein S...   173  1.4e-17   2
UNIPROTKB|H9L236 - symbol:MRPS12 "Uncharacterized protein...   182  2.9e-17   2
ZFIN|ZDB-GENE-091204-48 - symbol:si:dkey-17e16.10 "si:dke...   198  7.7e-16   1
UNIPROTKB|Q29RU1 - symbol:MRPS12 "28S ribosomal protein S...   185  1.8e-14   1
MGI|MGI:1346333 - symbol:Mrps12 "mitochondrial ribosomal ...   182  3.8e-14   1
RGD|1306221 - symbol:Mrps12 "mitochondrial ribosomal prot...   182  3.8e-14   1
UNIPROTKB|E2RE10 - symbol:MRPS12 "Uncharacterized protein...   174  2.7e-13   1
TIGR_CMR|NSE_0689 - symbol:NSE_0689 "ribosomal protein S1...   168  1.2e-12   1
TIGR_CMR|CJE_0540 - symbol:CJE_0540 "ribosomal protein S1...   167  1.5e-12   1
TIGR_CMR|APH_1035 - symbol:APH_1035 "ribosomal protein S1...   166  1.9e-12   1
TIGR_CMR|ECH_0963 - symbol:ECH_0963 "ribosomal protein S1...   164  3.1e-12   1
UNIPROTKB|P41196 - symbol:rpsL "30S ribosomal protein S12...   162  5.0e-12   1
TIGR_CMR|BA_0105 - symbol:BA_0105 "ribosomal protein S12"...   160  8.2e-12   1
TIGR_CMR|SPO_3501 - symbol:SPO_3501 "ribosomal protein S1...   159  1.0e-11   1
UNIPROTKB|P0C460 - symbol:rps12-A "30S ribosomal protein ...   157  1.7e-11   1
UNIPROTKB|P0C461 - symbol:rps12-A "30S ribosomal protein ...   157  1.7e-11   1
UNIPROTKB|P12149 - symbol:rps12-A "30S ribosomal protein ...   157  1.7e-11   1
UNIPROTKB|Q6ENC0 - symbol:rps12 "30S ribosomal protein S1...   157  1.7e-11   1
TIGR_CMR|DET_0470 - symbol:DET_0470 "ribosomal protein S1...   156  2.2e-11   1
TIGR_CMR|SO_0226 - symbol:SO_0226 "ribosomal protein S12"...   153  4.5e-11   1
CGD|CAL0001528 - symbol:orf19.2438 species:5476 "Candida ...   152  5.8e-11   1
TIGR_CMR|CBU_0233 - symbol:CBU_0233 "ribosomal protein S1...   151  7.4e-11   1
ASPGD|ASPL0000075253 - symbol:AN4730 species:162425 "Emer...   150  9.4e-11   1
UNIPROTKB|P0A7S3 - symbol:rpsL species:83333 "Escherichia...   150  9.4e-11   1
UNIPROTKB|Q9KUZ9 - symbol:rpsL "30S ribosomal protein S12...   150  9.4e-11   1
TIGR_CMR|CPS_4767 - symbol:CPS_4767 "ribosomal protein S1...   150  9.4e-11   1
TIGR_CMR|VC_0359 - symbol:VC_0359 "ribosomal protein S12"...   150  9.4e-11   1
TIGR_CMR|CHY_2315 - symbol:CHY_2315 "ribosomal protein S1...   148  1.5e-10   1
POMBASE|SPAC4F8.06 - symbol:SPAC4F8.06 "mitochondrial rib...   145  3.2e-10   1
UNIPROTKB|P28520 - symbol:RPS12 "Ribosomal protein S12, m...   143  5.2e-10   1
UNIPROTKB|Q2F983 - symbol:rps12 "Ribosomal protein S12" s...   143  5.2e-10   1
UNIPROTKB|Q7JAI8 - symbol:rps12 "Ribosomal protein S12" s...   143  5.2e-10   1
SGD|S000005319 - symbol:MRPS12 "Mitochondrial protein" sp...   142  6.6e-10   1
WB|WBGene00011391 - symbol:mrps-12 species:6239 "Caenorha...   133  5.9e-09   1
DICTYBASE|DDB_G0294074 - symbol:mrps12 "ribosomal protein...   123  6.8e-08   1


>FB|FBgn0003714 [details] [associations]
            symbol:tko "technical knockout" species:7227 "Drosophila
            melanogaster" [GO:0007638 "mechanosensory behavior" evidence=IMP]
            [GO:0009612 "response to mechanical stimulus" evidence=IMP]
            [GO:0006412 "translation" evidence=ISS] [GO:0003735 "structural
            constituent of ribosome" evidence=ISS] [GO:0005763 "mitochondrial
            small ribosomal subunit" evidence=ISS] [GO:0007605 "sensory
            perception of sound" evidence=IMP] [GO:0008049 "male courtship
            behavior" evidence=IMP] [GO:0007619 "courtship behavior"
            evidence=TAS] [GO:0001666 "response to hypoxia" evidence=IDA]
            InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
            PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 GO:GO:0006412
            EMBL:AE014298 GO:GO:0001666 GO:GO:0007605 GO:GO:0003735
            GO:GO:0008049 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
            GO:GO:0005763 GO:GO:0007638 PANTHER:PTHR11652 TIGRFAMs:TIGR00981
            eggNOG:COG0048 GeneTree:ENSGT00550000075103 OMA:LNQMHRQ EMBL:M19494
            EMBL:AJ250320 EMBL:AL133505 EMBL:BT015958 PIR:A29622
            RefSeq:NP_001245490.1 RefSeq:NP_525050.1 UniGene:Dm.1694
            ProteinModelPortal:P10735 SMR:P10735 DIP:DIP-22123N
            MINT:MINT-760161 STRING:P10735 PaxDb:P10735 PRIDE:P10735
            EnsemblMetazoa:FBtr0070459 GeneID:31228 KEGG:dme:Dmel_CG7925
            CTD:31228 FlyBase:FBgn0003714 InParanoid:P10735 OrthoDB:EOG4PC88F
            PhylomeDB:P10735 GenomeRNAi:31228 NextBio:772558 Bgee:P10735
            GermOnline:CG7925 Uniprot:P10735
        Length = 140

 Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
 Identities = 48/75 (64%), Positives = 59/75 (78%)

Query:     3 MKGPHYKKRPPRQPLLGKPFAKGKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKC 62
             +K P       R+ +L +  + GKEMVAYIPG GHNLQEHNIVLC+VGR++D+PGVK+K 
Sbjct:    67 IKKPKKPNSANRKCVLVR-LSTGKEMVAYIPGIGHNLQEHNIVLCRVGRLQDVPGVKLKA 125

Query:    63 VRGVYDLPHVVKKTQ 77
             VRGVYDL HVVKK+Q
Sbjct:   126 VRGVYDLAHVVKKSQ 140

 Score = 113 (44.8 bits), Expect = 7.8e-07, P = 7.8e-07
 Identities = 27/63 (42%), Positives = 34/63 (53%)

Query:     1 MHMKGPHYKKRPPRQPLLGKPFAKGKEMVAYIPG-EGHNLQEHNIVLCKVGRVKDL---- 55
             MH  GPH K RPPRQPL GKPFAKG  +   I   +  N      VL ++   K++    
Sbjct:    36 MHRSGPHIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRLSTGKEMVAYI 95

Query:    56 PGV 58
             PG+
Sbjct:    96 PGI 98


>UNIPROTKB|O15235 [details] [associations]
            symbol:MRPS12 "28S ribosomal protein S12, mitochondrial"
            species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
            ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
            [GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0005761
            "mitochondrial ribosome" evidence=TAS] [GO:0005515 "protein
            binding" evidence=IPI] InterPro:IPR005679 InterPro:IPR006032
            Pfam:PF00164 PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055
            GO:GO:0006412 EMBL:CH471126 GO:GO:0003735 Gene3D:2.40.50.140
            InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0005761 GO:GO:0015935
            PANTHER:PTHR11652 TIGRFAMs:TIGR00981 eggNOG:COG0048
            HOGENOM:HOG000040063 CTD:6183 HOVERGEN:HBG001525 OMA:LNQMHRQ
            OrthoDB:EOG4MGS8W EMBL:Y11681 EMBL:AF058761 EMBL:CR407609
            EMBL:BC001617 EMBL:BC006424 EMBL:BC007499 IPI:IPI00005692
            RefSeq:NP_066930.1 RefSeq:NP_203526.1 RefSeq:NP_203527.1
            UniGene:Hs.411125 ProteinModelPortal:O15235 SMR:O15235
            IntAct:O15235 MINT:MINT-1373561 STRING:O15235 PhosphoSite:O15235
            PaxDb:O15235 PeptideAtlas:O15235 PRIDE:O15235 DNASU:6183
            Ensembl:ENST00000308018 Ensembl:ENST00000402029
            Ensembl:ENST00000407800 GeneID:6183 KEGG:hsa:6183 UCSC:uc002okc.3
            GeneCards:GC19P039422 HGNC:HGNC:10380 HPA:HPA046775 HPA:HPA050633
            MIM:603021 neXtProt:NX_O15235 PharmGKB:PA30996 InParanoid:O15235
            PhylomeDB:O15235 GenomeRNAi:6183 NextBio:24009 Bgee:O15235
            CleanEx:HS_MRPS12 Genevestigator:O15235 GermOnline:ENSG00000128626
            Uniprot:O15235
        Length = 138

 Score = 173 (66.0 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
 Identities = 33/51 (64%), Positives = 38/51 (74%)

Query:    25 GKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLPHVVKK 75
             G+E V +IPGEGH LQEH IVL + GR +DLPGVK+  VRG YD  HV KK
Sbjct:    88 GREAVCFIPGEGHTLQEHQIVLVEGGRTQDLPGVKLTVVRGKYDCGHVQKK 138

 Score = 55 (24.4 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
 Identities = 14/27 (51%), Positives = 16/27 (59%)

Query:     1 MHMKGPHYKKRPPRQ--PLLGKPFAKG 25
             MH  GP   KRPPR+  P  G+P  KG
Sbjct:    36 MHRLGP--PKRPPRKLGPTEGRPQLKG 60


>UNIPROTKB|H9L236 [details] [associations]
            symbol:MRPS12 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003735 "structural constituent of ribosome"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
            "small ribosomal subunit" evidence=IEA] [GO:0005739 "mitochondrion"
            evidence=IEA] InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
            PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 GO:GO:0006412
            GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
            GO:GO:0015935 PANTHER:PTHR11652 TIGRFAMs:TIGR00981
            GeneTree:ENSGT00550000075103 OMA:LNQMHRQ EMBL:AADN02036685
            Ensembl:ENSGALT00000035751 Uniprot:H9L236
        Length = 110

 Score = 182 (69.1 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
 Identities = 32/53 (60%), Positives = 42/53 (79%)

Query:    23 AKGKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLPHVVKK 75
             + G+E+V ++PGEGHNLQEH++VL + GR +DLPGVK+  VRG YD  HV KK
Sbjct:    57 SNGREVVCFVPGEGHNLQEHHVVLVQGGRTQDLPGVKLTVVRGKYDCAHVQKK 109

 Score = 43 (20.2 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
 Identities = 11/26 (42%), Positives = 14/26 (53%)

Query:     1 MHMKGPHYKKRPPRQ-PLLGKPFAKG 25
             MH +G   K  PP+  P  G+P  KG
Sbjct:     7 MHRQG-RPKPPPPKPGPTFGRPQLKG 31


>ZFIN|ZDB-GENE-091204-48 [details] [associations]
            symbol:si:dkey-17e16.10 "si:dkey-17e16.10"
            species:7955 "Danio rerio" [GO:0003735 "structural constituent of
            ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
            [GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0006412
            "translation" evidence=IEA] [GO:0005622 "intracellular"
            evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
            InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
            PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055
            ZFIN:ZDB-GENE-091204-48 GO:GO:0006412 GO:GO:0003735
            Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0015935
            PANTHER:PTHR11652 TIGRFAMs:TIGR00981 GeneTree:ENSGT00550000075103
            EMBL:CR388166 IPI:IPI00995277 RefSeq:XP_003200900.1
            Ensembl:ENSDART00000122505 Ensembl:ENSDART00000144917
            GeneID:100537619 KEGG:dre:100537619 Uniprot:E7F8G8
        Length = 143

 Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
 Identities = 36/55 (65%), Positives = 43/55 (78%)

Query:    23 AKGKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLPHVVKKTQ 77
             + G+E V YIPGEGHNLQEHN+VL + GR +DLPGVK+  +RG YD  HVVKK Q
Sbjct:    89 SNGQEAVVYIPGEGHNLQEHNVVLVQGGRTQDLPGVKLAVIRGKYDCAHVVKKKQ 143


>UNIPROTKB|Q29RU1 [details] [associations]
            symbol:MRPS12 "28S ribosomal protein S12, mitochondrial"
            species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
            [GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0006412
            "translation" evidence=IEA] [GO:0003735 "structural constituent of
            ribosome" evidence=IEA] InterPro:IPR005679 InterPro:IPR006032
            Pfam:PF00164 PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055
            GO:GO:0005739 GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140
            InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0015935 PANTHER:PTHR11652
            TIGRFAMs:TIGR00981 eggNOG:COG0048 HOGENOM:HOG000040063
            EMBL:BC114019 IPI:IPI00697120 RefSeq:NP_001070569.1
            UniGene:Bt.59090 STRING:Q29RU1 PRIDE:Q29RU1
            Ensembl:ENSBTAT00000002335 GeneID:768042 KEGG:bta:768042 CTD:6183
            GeneTree:ENSGT00550000075103 HOVERGEN:HBG001525 InParanoid:Q29RU1
            OMA:LNQMHRQ OrthoDB:EOG4MGS8W NextBio:20918397 Uniprot:Q29RU1
        Length = 139

 Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
 Identities = 34/51 (66%), Positives = 41/51 (80%)

Query:    25 GKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLPHVVKK 75
             G+E V +IPGEGHNLQEH++VL + GR +DLPGVK+K VRG YD  HV KK
Sbjct:    88 GREAVCFIPGEGHNLQEHHVVLVQGGRTQDLPGVKLKVVRGKYDCGHVQKK 138


>MGI|MGI:1346333 [details] [associations]
            symbol:Mrps12 "mitochondrial ribosomal protein S12"
            species:10090 "Mus musculus" [GO:0003735 "structural constituent of
            ribosome" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
            [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005840 "ribosome"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
            "small ribosomal subunit" evidence=IEA] [GO:0030529
            "ribonucleoprotein complex" evidence=IEA] InterPro:IPR005679
            InterPro:IPR006032 Pfam:PF00164 PIRSF:PIRSF002133 PRINTS:PR01034
            PROSITE:PS00055 MGI:MGI:1346333 GO:GO:0005739 GO:GO:0006412
            GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
            GO:GO:0015935 PANTHER:PTHR11652 TIGRFAMs:TIGR00981 eggNOG:COG0048
            HOGENOM:HOG000040063 CTD:6183 GeneTree:ENSGT00550000075103
            HOVERGEN:HBG001525 OMA:LNQMHRQ OrthoDB:EOG4MGS8W EMBL:Y11682
            EMBL:BC012679 EMBL:BC027522 IPI:IPI00132932 RefSeq:NP_036015.1
            UniGene:Mm.358650 ProteinModelPortal:O35680 SMR:O35680
            STRING:O35680 PhosphoSite:O35680 PaxDb:O35680 PRIDE:O35680
            Ensembl:ENSMUST00000056078 Ensembl:ENSMUST00000171183 GeneID:24030
            KEGG:mmu:24030 UCSC:uc009fzo.1 InParanoid:O35680 NextBio:303963
            Bgee:O35680 CleanEx:MM_MRPS12 Genevestigator:O35680
            GermOnline:ENSMUSG00000045948 Uniprot:O35680
        Length = 139

 Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
 Identities = 34/51 (66%), Positives = 40/51 (78%)

Query:    25 GKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLPHVVKK 75
             GKE V +IPGEGH LQEH++VL + GR +DLPGVK+K VRG YD  HV KK
Sbjct:    88 GKEAVCFIPGEGHTLQEHHVVLVEGGRTQDLPGVKLKVVRGKYDCGHVQKK 138


>RGD|1306221 [details] [associations]
            symbol:Mrps12 "mitochondrial ribosomal protein S12"
            species:10116 "Rattus norvegicus" [GO:0003735 "structural
            constituent of ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
            evidence=IEA;ISO] [GO:0006412 "translation" evidence=IEA]
            [GO:0015935 "small ribosomal subunit" evidence=IEA]
            InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
            PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 RGD:1306221
            GO:GO:0005739 GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140
            InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH473979 GO:GO:0015935
            PANTHER:PTHR11652 TIGRFAMs:TIGR00981 CTD:6183
            GeneTree:ENSGT00550000075103 OMA:LNQMHRQ OrthoDB:EOG4MGS8W
            IPI:IPI00197829 RefSeq:NP_001099709.1 UniGene:Rn.8526
            Ensembl:ENSRNOT00000027029 GeneID:292758 KEGG:rno:292758
            NextBio:634698 Uniprot:D3ZQX3
        Length = 139

 Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
 Identities = 34/51 (66%), Positives = 40/51 (78%)

Query:    25 GKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLPHVVKK 75
             GKE V +IPGEGH LQEH++VL + GR +DLPGVK+K VRG YD  HV KK
Sbjct:    88 GKEAVCFIPGEGHTLQEHHVVLVEGGRTQDLPGVKLKVVRGKYDCGHVQKK 138


>UNIPROTKB|E2RE10 [details] [associations]
            symbol:MRPS12 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
            [GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0006412
            "translation" evidence=IEA] [GO:0003735 "structural constituent of
            ribosome" evidence=IEA] InterPro:IPR005679 InterPro:IPR006032
            Pfam:PF00164 PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055
            GO:GO:0005739 GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140
            InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0015935 PANTHER:PTHR11652
            TIGRFAMs:TIGR00981 CTD:6183 GeneTree:ENSGT00550000075103
            OMA:LNQMHRQ EMBL:AAEX03000966 RefSeq:XP_541631.3
            ProteinModelPortal:E2RE10 Ensembl:ENSCAFT00000009045 GeneID:484517
            KEGG:cfa:484517 NextBio:20858647 Uniprot:E2RE10
        Length = 139

 Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
 Identities = 32/51 (62%), Positives = 40/51 (78%)

Query:    25 GKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLPHVVKK 75
             G+E V +IPGEGH+LQEH++VL + GR +DLPGVK+  VRG YD  HV KK
Sbjct:    88 GREAVCFIPGEGHSLQEHHVVLVQGGRTQDLPGVKLTVVRGKYDCGHVQKK 138


>TIGR_CMR|NSE_0689 [details] [associations]
            symbol:NSE_0689 "ribosomal protein S12" species:222891
            "Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
            constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
            evidence=ISS] [GO:0015935 "small ribosomal subunit" evidence=ISS]
            InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
            PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 GO:GO:0006412
            GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 GO:GO:0000049
            SUPFAM:SSF50249 GO:GO:0019843 EMBL:CP000237
            GenomeReviews:CP000237_GR GO:GO:0015935 HAMAP:MF_00403_B
            PANTHER:PTHR11652 TIGRFAMs:TIGR00981 eggNOG:COG0048 KO:K02950
            HOGENOM:HOG000040063 OMA:SCPERRG ProtClustDB:PRK05163
            RefSeq:YP_506566.2 ProteinModelPortal:Q2GD80 SMR:Q2GD80
            STRING:Q2GD80 GeneID:3932187 KEGG:nse:NSE_0689 PATRIC:22681397
            BioCyc:NSEN222891:GHFU-702-MONOMER Uniprot:Q2GD80
        Length = 122

 Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 30/44 (68%), Positives = 37/44 (84%)

Query:    25 GKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYD 68
             G E++AYIPGEGHNLQEH++V  + GRVKDLPGV+   VRGV+D
Sbjct:    60 GAEVIAYIPGEGHNLQEHSVVCIRGGRVKDLPGVRYHIVRGVFD 103


>TIGR_CMR|CJE_0540 [details] [associations]
            symbol:CJE_0540 "ribosomal protein S12" species:195099
            "Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
            of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            [GO:0006450 "regulation of translational fidelity" evidence=ISS]
            [GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR005679
            InterPro:IPR006032 Pfam:PF00164 PIRSF:PIRSF002133 PRINTS:PR01034
            PROSITE:PS00055 GO:GO:0006412 EMBL:CP000025
            GenomeReviews:CP000025_GR GO:GO:0003735 Gene3D:2.40.50.140
            InterPro:IPR012340 GO:GO:0000049 SUPFAM:SSF50249 GO:GO:0019843
            GO:GO:0015935 HAMAP:MF_00403_B PANTHER:PTHR11652 TIGRFAMs:TIGR00981
            eggNOG:COG0048 KO:K02950 HOGENOM:HOG000040063 OMA:SCPERRG
            ProtClustDB:PRK05163 RefSeq:YP_178557.1 ProteinModelPortal:Q5HVX8
            SMR:Q5HVX8 STRING:Q5HVX8 GeneID:3231301 KEGG:cjr:CJE0540
            PATRIC:20042802 BioCyc:CJEJ195099:GJC0-555-MONOMER Uniprot:Q5HVX8
        Length = 128

 Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 33/52 (63%), Positives = 39/52 (75%)

Query:    25 GKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLPHVVKKT 76
             G E+++YI GEGHNLQEH+IVL + GRVKDLPGVK   VRG  D   V K+T
Sbjct:    60 GFEVISYIGGEGHNLQEHSIVLVRGGRVKDLPGVKYHIVRGALDTAGVAKRT 111


>TIGR_CMR|APH_1035 [details] [associations]
            symbol:APH_1035 "ribosomal protein S12" species:212042
            "Anaplasma phagocytophilum HZ" [GO:0003735 "structural constituent
            of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            [GO:0015935 "small ribosomal subunit" evidence=ISS]
            InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
            PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 GO:GO:0006412
            GO:GO:0003735 EMBL:CP000235 GenomeReviews:CP000235_GR
            Gene3D:2.40.50.140 InterPro:IPR012340 GO:GO:0000049 SUPFAM:SSF50249
            GO:GO:0019843 GO:GO:0015935 HAMAP:MF_00403_B PANTHER:PTHR11652
            TIGRFAMs:TIGR00981 eggNOG:COG0048 KO:K02950 RefSeq:YP_505593.1
            ProteinModelPortal:Q2GJ58 SMR:Q2GJ58 STRING:Q2GJ58 GeneID:3930709
            KEGG:aph:APH_1035 PATRIC:20950820 HOGENOM:HOG000040063 OMA:SCPERRG
            ProtClustDB:PRK05163 BioCyc:APHA212042:GHPM-1041-MONOMER
            Uniprot:Q2GJ58
        Length = 124

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 30/44 (68%), Positives = 36/44 (81%)

Query:    25 GKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYD 68
             G E++AYIPGEGHNLQEH++VL + GRVKDLPGV+   VRG  D
Sbjct:    61 GSEVIAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGALD 104


>TIGR_CMR|ECH_0963 [details] [associations]
            symbol:ECH_0963 "ribosomal protein S12" species:205920
            "Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
            constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
            evidence=ISS] [GO:0015935 "small ribosomal subunit" evidence=ISS]
            InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
            PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 EMBL:CP000236
            GenomeReviews:CP000236_GR GO:GO:0006412 GO:GO:0003735
            Gene3D:2.40.50.140 InterPro:IPR012340 GO:GO:0000049 SUPFAM:SSF50249
            GO:GO:0019843 GO:GO:0015935 HAMAP:MF_00403_B PANTHER:PTHR11652
            TIGRFAMs:TIGR00981 eggNOG:COG0048 KO:K02950 HOGENOM:HOG000040063
            OMA:SCPERRG ProtClustDB:PRK05163 RefSeq:YP_507750.1
            ProteinModelPortal:Q2GFN3 SMR:Q2GFN3 STRING:Q2GFN3 PRIDE:Q2GFN3
            GeneID:3927553 KEGG:ech:ECH_0963 PATRIC:20577308
            BioCyc:ECHA205920:GJNR-966-MONOMER Uniprot:Q2GFN3
        Length = 123

 Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 28/44 (63%), Positives = 36/44 (81%)

Query:    25 GKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYD 68
             G E++AYIPGEGHNLQEH+++L + GRVKDLPGV+   +RG  D
Sbjct:    61 GSEVIAYIPGEGHNLQEHSVILIRGGRVKDLPGVRYHIIRGALD 104


>UNIPROTKB|P41196 [details] [associations]
            symbol:rpsL "30S ribosomal protein S12" species:1773
            "Mycobacterium tuberculosis" [GO:0040007 "growth" evidence=IMP]
            InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
            PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 GO:GO:0040007
            EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
            GO:GO:0006412 GO:GO:0046677 EMBL:BX842574 GO:GO:0003735
            Gene3D:2.40.50.140 InterPro:IPR012340 GO:GO:0000049 SUPFAM:SSF50249
            GO:GO:0019843 GO:GO:0015935 HAMAP:MF_00403_B PANTHER:PTHR11652
            TIGRFAMs:TIGR00981 eggNOG:COG0048 KO:K02950 HOGENOM:HOG000040063
            OMA:SCPERRG ProtClustDB:PRK05163 EMBL:X70995 EMBL:L08011
            EMBL:AF398879 EMBL:AF398880 EMBL:AF398881 EMBL:AF398882
            EMBL:AY156729 EMBL:AY156730 EMBL:AY156732 EMBL:AY156733
            EMBL:AF367438 PIR:S39591 RefSeq:NP_215196.1 RefSeq:NP_335122.1
            RefSeq:YP_006514025.1 ProteinModelPortal:P41196 SMR:P41196
            PRIDE:P41196 EnsemblBacteria:EBMYCT00000002672
            EnsemblBacteria:EBMYCT00000072055 GeneID:13318570 GeneID:888259
            GeneID:925995 KEGG:mtc:MT0710 KEGG:mtu:Rv0682 KEGG:mtv:RVBD_0682
            PATRIC:18123287 TubercuList:Rv0682 Uniprot:P41196
        Length = 124

 Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 31/51 (60%), Positives = 38/51 (74%)

Query:    27 EMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLPHVVKKTQ 77
             E+ AYIPGEGHNLQEH++VL + GRVKDLPGV+ K +RG  D   V  + Q
Sbjct:    62 EVTAYIPGEGHNLQEHSMVLVRGGRVKDLPGVRYKIIRGSLDTQGVKNRKQ 112


>TIGR_CMR|BA_0105 [details] [associations]
            symbol:BA_0105 "ribosomal protein S12" species:198094
            "Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
            of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
            PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 EMBL:AE016879
            EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
            GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006412
            GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 GO:GO:0000049
            SUPFAM:SSF50249 GO:GO:0019843 GO:GO:0015935 HAMAP:MF_00403_B
            PANTHER:PTHR11652 TIGRFAMs:TIGR00981 eggNOG:COG0048 KO:K02950
            HOGENOM:HOG000040063 OMA:SCPERRG ProtClustDB:PRK05163
            RefSeq:NP_842673.1 RefSeq:YP_016710.1 RefSeq:YP_026391.1
            ProteinModelPortal:Q81VT5 SMR:Q81VT5 DNASU:1086682
            EnsemblBacteria:EBBACT00000011134 EnsemblBacteria:EBBACT00000017848
            EnsemblBacteria:EBBACT00000019741 GeneID:1086682 GeneID:2818174
            GeneID:2850980 KEGG:ban:BA_0105 KEGG:bar:GBAA_0105 KEGG:bat:BAS0105
            BioCyc:BANT260799:GJAJ-116-MONOMER
            BioCyc:BANT261594:GJ7F-118-MONOMER Uniprot:Q81VT5
        Length = 140

 Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 32/53 (60%), Positives = 38/53 (71%)

Query:    25 GKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLPHVVKKTQ 77
             G E+ AYIPG GHNLQEH++VL + GRVKDLPGV+   VRG  D   V K+ Q
Sbjct:    73 GIEVTAYIPGIGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGALDTAGVDKRMQ 125


>TIGR_CMR|SPO_3501 [details] [associations]
            symbol:SPO_3501 "ribosomal protein S12" species:246200
            "Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
            ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
            PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 EMBL:CP000031
            GenomeReviews:CP000031_GR GO:GO:0006412 GO:GO:0003735
            Gene3D:2.40.50.140 InterPro:IPR012340 GO:GO:0000049 SUPFAM:SSF50249
            GO:GO:0019843 GO:GO:0015935 HAMAP:MF_00403_B PANTHER:PTHR11652
            TIGRFAMs:TIGR00981 eggNOG:COG0048 KO:K02950 HOGENOM:HOG000040063
            OMA:SCPERRG ProtClustDB:PRK05163 RefSeq:YP_168696.1
            ProteinModelPortal:Q5LMR2 SMR:Q5LMR2 GeneID:3193405
            KEGG:sil:SPO3501 PATRIC:23380469 Uniprot:Q5LMR2
        Length = 123

 Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 30/53 (56%), Positives = 39/53 (73%)

Query:    25 GKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLPHVVKKTQ 77
             G E+++YIPGE HNLQEH++VL + GRVKDLPGV+   +RGV D   V  + Q
Sbjct:    60 GYEVISYIPGESHNLQEHSVVLIRGGRVKDLPGVRYHILRGVLDTQGVKDRKQ 112


>UNIPROTKB|P0C460 [details] [associations]
            symbol:rps12-A "30S ribosomal protein S12, chloroplastic"
            species:4530 "Oryza sativa" [GO:0009536 "plastid" evidence=IC]
            InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
            PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 GO:GO:0009507
            GO:GO:0009536 GO:GO:0006412 EMBL:AY522331 GO:GO:0003735
            Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
            GO:GO:0015935 HAMAP:MF_00403_B PANTHER:PTHR11652 TIGRFAMs:TIGR00981
            ProteinModelPortal:P0C460 SMR:P0C460 Gramene:P0C460
            Genevestigator:P0C460 Uniprot:P0C460
        Length = 124

 Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 30/53 (56%), Positives = 38/53 (71%)

Query:    25 GKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLPHVVKKTQ 77
             G E+ AYIPG GHNLQEH++VL + GRVKDLPGV+ + +RG  D   V  + Q
Sbjct:    60 GFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYRIIRGALDAVAVKNRQQ 112


>UNIPROTKB|P0C461 [details] [associations]
            symbol:rps12-A "30S ribosomal protein S12, chloroplastic"
            species:39946 "Oryza sativa Indica Group" [GO:0009536 "plastid"
            evidence=IC] InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
            PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 GO:GO:0009507
            GO:GO:0009536 GO:GO:0006412 EMBL:AY522329 GO:GO:0003735
            Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
            GO:GO:0015935 HAMAP:MF_00403_B PANTHER:PTHR11652 TIGRFAMs:TIGR00981
            ProteinModelPortal:P0C461 SMR:P0C461 Gramene:P0C461 Uniprot:P0C461
        Length = 124

 Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 30/53 (56%), Positives = 38/53 (71%)

Query:    25 GKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLPHVVKKTQ 77
             G E+ AYIPG GHNLQEH++VL + GRVKDLPGV+ + +RG  D   V  + Q
Sbjct:    60 GFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYRIIRGALDAVAVKNRQQ 112


>UNIPROTKB|P12149 [details] [associations]
            symbol:rps12-A "30S ribosomal protein S12, chloroplastic"
            species:39947 "Oryza sativa Japonica Group" [GO:0009536 "plastid"
            evidence=IC;ISS] InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
            PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 GO:GO:0009507
            GO:GO:0009536 GO:GO:0006412 EMBL:X15901 EMBL:AY522330 GO:GO:0003735
            Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
            GO:GO:0015935 ProtClustDB:CHL00051 HAMAP:MF_00403_B
            PANTHER:PTHR11652 TIGRFAMs:TIGR00981 PIR:JQ0250 RefSeq:NP_039359.1
            RefSeq:NP_039457.2 ProteinModelPortal:P12149 SMR:P12149
            STRING:P12149 GeneID:3131385 GeneID:3131499 KEGG:osa:3131385
            KEGG:osa:3131499 Gramene:P12149 eggNOG:COG0048 KO:K02950
            Uniprot:P12149
        Length = 124

 Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 30/53 (56%), Positives = 38/53 (71%)

Query:    25 GKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLPHVVKKTQ 77
             G E+ AYIPG GHNLQEH++VL + GRVKDLPGV+ + +RG  D   V  + Q
Sbjct:    60 GFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYRIIRGALDAVAVKNRQQ 112


>UNIPROTKB|Q6ENC0 [details] [associations]
            symbol:rps12 "30S ribosomal protein S12, chloroplastic"
            species:4536 "Oryza nivara" [GO:0009536 "plastid" evidence=IC]
            InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
            PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 GO:GO:0009507
            GO:GO:0009536 GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140
            InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843 EMBL:AP006728
            GO:GO:0015935 RefSeq:YP_052725.1 RefSeq:YP_203383.1
            ProteinModelPortal:Q6ENC0 SMR:Q6ENC0 GeneID:2885891 GeneID:3276630
            Gramene:Q6ENC0 ProtClustDB:CHL00051 HAMAP:MF_00403_B
            PANTHER:PTHR11652 TIGRFAMs:TIGR00981 Uniprot:Q6ENC0
        Length = 124

 Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 30/53 (56%), Positives = 38/53 (71%)

Query:    25 GKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLPHVVKKTQ 77
             G E+ AYIPG GHNLQEH++VL + GRVKDLPGV+ + +RG  D   V  + Q
Sbjct:    60 GFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYRIIRGALDAVAVKNRQQ 112


>TIGR_CMR|DET_0470 [details] [associations]
            symbol:DET_0470 "ribosomal protein S12" species:243164
            "Dehalococcoides ethenogenes 195" [GO:0003735 "structural
            constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
            evidence=ISS] [GO:0015935 "small ribosomal subunit" evidence=ISS]
            InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
            PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 GO:GO:0006412
            GO:GO:0003735 EMBL:CP000027 GenomeReviews:CP000027_GR
            Gene3D:2.40.50.140 InterPro:IPR012340 GO:GO:0000049 SUPFAM:SSF50249
            GO:GO:0019843 GO:GO:0015935 HAMAP:MF_00403_B PANTHER:PTHR11652
            TIGRFAMs:TIGR00981 eggNOG:COG0048 KO:K02950 HOGENOM:HOG000040063
            OMA:SCPERRG ProtClustDB:PRK05163 RefSeq:YP_181214.1
            ProteinModelPortal:Q3Z985 SMR:Q3Z985 STRING:Q3Z985 PRIDE:Q3Z985
            GeneID:3230165 KEGG:det:DET0470 PATRIC:21608009
            BioCyc:DETH243164:GJNF-470-MONOMER Uniprot:Q3Z985
        Length = 144

 Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 29/51 (56%), Positives = 36/51 (70%)

Query:    27 EMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLPHVVKKTQ 77
             E+ AYIPGEGHNLQEH++VL + GRV DLPGV+   +RG  D   V  + Q
Sbjct:    76 EVTAYIPGEGHNLQEHSVVLIRGGRVPDLPGVRYHIIRGTLDTAGVANRQQ 126


>TIGR_CMR|SO_0226 [details] [associations]
            symbol:SO_0226 "ribosomal protein S12" species:211586
            "Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
            ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
            PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 GO:GO:0006412
            EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0003735
            Gene3D:2.40.50.140 InterPro:IPR012340 GO:GO:0000049 SUPFAM:SSF50249
            GO:GO:0019843 GO:GO:0015935 HAMAP:MF_00403_B PANTHER:PTHR11652
            TIGRFAMs:TIGR00981 eggNOG:COG0048 KO:K02950 HOGENOM:HOG000040063
            OMA:SCPERRG ProtClustDB:PRK05163 RefSeq:NP_715866.1
            ProteinModelPortal:P59166 SMR:P59166 GeneID:1168109
            KEGG:son:SO_0226 PATRIC:23520145 Uniprot:P59166
        Length = 124

 Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
 Identities = 29/53 (54%), Positives = 37/53 (69%)

Query:    25 GKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLPHVVKKTQ 77
             G E+ +YI GEGHNLQEH+++L + GRVKDLPGV+   VRG  D   V  + Q
Sbjct:    60 GFEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGALDCAGVTSRRQ 112


>CGD|CAL0001528 [details] [associations]
            symbol:orf19.2438 species:5476 "Candida albicans" [GO:0005840
            "ribosome" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
            InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
            PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 CGD:CAL0001528
            GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
            SUPFAM:SSF50249 EMBL:AACQ01000041 EMBL:AACQ01000040 GO:GO:0015935
            PANTHER:PTHR11652 TIGRFAMs:TIGR00981 eggNOG:COG0048
            HOGENOM:HOG000040063 RefSeq:XP_718461.1 RefSeq:XP_718544.1
            ProteinModelPortal:Q5AA46 SMR:Q5AA46 STRING:Q5AA46 GeneID:3639816
            GeneID:3639824 KEGG:cal:CaO19.2438 KEGG:cal:CaO19.9974
            Uniprot:Q5AA46
        Length = 180

 Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
 Identities = 29/51 (56%), Positives = 37/51 (72%)

Query:    25 GKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLPHVVKK 75
             G  + A IPGEGHNLQEH++VL + GRV+D+PGVK   VRG +DL  V  +
Sbjct:   116 GNVISALIPGEGHNLQEHHVVLVRGGRVQDVPGVKYHLVRGAFDLVGVANR 166


>TIGR_CMR|CBU_0233 [details] [associations]
            symbol:CBU_0233 "ribosomal protein S12" species:227377
            "Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
            ribosome" evidence=ISS] InterPro:IPR005679 InterPro:IPR006032
            Pfam:PF00164 PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055
            GO:GO:0006412 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0003735
            Gene3D:2.40.50.140 InterPro:IPR012340 GO:GO:0000049 SUPFAM:SSF50249
            GO:GO:0019843 GO:GO:0015935 HAMAP:MF_00403_B PANTHER:PTHR11652
            TIGRFAMs:TIGR00981 eggNOG:COG0048 KO:K02950 HOGENOM:HOG000040063
            OMA:SCPERRG ProtClustDB:PRK05163 RefSeq:NP_819277.2
            ProteinModelPortal:Q83ES9 SMR:Q83ES9 PRIDE:Q83ES9 GeneID:1208114
            KEGG:cbu:CBU_0233 PATRIC:17929159
            BioCyc:CBUR227377:GJ7S-239-MONOMER Uniprot:Q83ES9
        Length = 124

 Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
 Identities = 29/44 (65%), Positives = 34/44 (77%)

Query:    25 GKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYD 68
             G E+ AYI GEGHNLQEH++VL + GRVKDLPGV+   VRG  D
Sbjct:    60 GAEVTAYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGSLD 103


>ASPGD|ASPL0000075253 [details] [associations]
            symbol:AN4730 species:162425 "Emericella nidulans"
            [GO:0005840 "ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
            evidence=IEA] [GO:0003735 "structural constituent of ribosome"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
            "small ribosomal subunit" evidence=IEA] InterPro:IPR005679
            InterPro:IPR006032 Pfam:PF00164 PIRSF:PIRSF002133 PRINTS:PR01034
            GO:GO:0006412 GO:GO:0003735 EMBL:BN001303 Gene3D:2.40.50.140
            InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0015935 PANTHER:PTHR11652
            TIGRFAMs:TIGR00981 HOGENOM:HOG000040063
            EnsemblFungi:CADANIAT00005699 OMA:LENCPER Uniprot:C8VAU5
        Length = 96

 Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
 Identities = 28/53 (52%), Positives = 36/53 (67%)

Query:    23 AKGKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLPHVVKK 75
             + GK + AYIPGEGHN+Q+H++VL + GR  D PGVK   VRG  DL  V  +
Sbjct:    29 SSGKVVTAYIPGEGHNVQQHSVVLVRGGRAPDCPGVKYHLVRGAMDLGGVASR 81


>UNIPROTKB|P0A7S3 [details] [associations]
            symbol:rpsL species:83333 "Escherichia coli K-12"
            [GO:0022627 "cytosolic small ribosomal subunit" evidence=IDA]
            [GO:0003735 "structural constituent of ribosome" evidence=IEA]
            [GO:0034337 "RNA folding" evidence=IDA] [GO:0034336 "misfolded RNA
            binding" evidence=IDA] [GO:0033120 "positive regulation of RNA
            splicing" evidence=IDA] [GO:0000372 "Group I intron splicing"
            evidence=IDA] [GO:0046677 "response to antibiotic" evidence=IEA]
            [GO:0019843 "rRNA binding" evidence=IEA;IDA] [GO:0000049 "tRNA
            binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA;IMP]
            InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
            PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 EMBL:U00096
            EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
            GO:GO:0006412 GO:GO:0046677 DrugBank:DB01172 EMBL:U18997
            GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 GO:GO:0000049
            SUPFAM:SSF50249 GO:GO:0019843 PDB:3J00 PDBsum:3J00 GO:GO:0000372
            GO:GO:0033120 DrugBank:DB00452 PDB:3J0E PDBsum:3J0E PDB:3EP2
            PDB:3EQ3 PDB:3EQ4 PDBsum:3EP2 PDBsum:3EQ3 PDBsum:3EQ4 PDB:3FIH
            PDB:3IZV PDB:3IZW PDBsum:3FIH PDBsum:3IZV PDBsum:3IZW GO:GO:0022627
            PDB:3DEG PDBsum:3DEG DrugBank:DB00798 GO:GO:0034337 PDB:3SFS
            PDB:3UOQ PDBsum:3SFS PDBsum:3UOQ PDB:3J0D PDBsum:3J0D
            HAMAP:MF_00403_B PANTHER:PTHR11652 TIGRFAMs:TIGR00981
            eggNOG:COG0048 KO:K02950 PDB:1ZN1 PDB:4GAS PDB:4GD1 PDBsum:1ZN1
            PDBsum:4GAS PDBsum:4GD1 PDB:1M5G PDB:1P6G PDB:1P87 PDB:1VS5
            PDB:1VS7 PDB:2AVY PDB:2AW7 PDB:2GY9 PDB:2GYB PDB:2I2P PDB:2I2U
            PDB:2QAL PDB:2QAN PDB:2QB9 PDB:2QBB PDB:2QBD PDB:2QBF PDB:2QBH
            PDB:2QBJ PDB:2QOU PDB:2QOW PDB:2QOY PDB:2QP0 PDB:2VHO PDB:2VHP
            PDB:2WWL PDB:2YKR PDB:2Z4K PDB:2Z4M PDB:3DF1 PDB:3DF3 PDB:3E1A
            PDB:3E1C PDB:3I1M PDB:3I1O PDB:3I1Q PDB:3I1S PDB:3I1Z PDB:3I21
            PDB:3J0U PDB:3J0V PDB:3J0X PDB:3J0Z PDB:3J10 PDB:3J13 PDB:3J18
            PDB:3KC4 PDB:3OAQ PDB:3OAR PDB:3OFA PDB:3OFB PDB:3OFO PDB:3OFP
            PDB:3OFX PDB:3OFY PDB:3OR9 PDB:3ORA PDB:4A2I PDB:4ADV PDB:4GAQ
            PDB:4GD2 PDBsum:1M5G PDBsum:1P6G PDBsum:1P87 PDBsum:1VS5
            PDBsum:1VS7 PDBsum:2AVY PDBsum:2AW7 PDBsum:2GY9 PDBsum:2GYB
            PDBsum:2I2P PDBsum:2I2U PDBsum:2QAL PDBsum:2QAN PDBsum:2QB9
            PDBsum:2QBB PDBsum:2QBD PDBsum:2QBF PDBsum:2QBH PDBsum:2QBJ
            PDBsum:2QOU PDBsum:2QOW PDBsum:2QOY PDBsum:2QP0 PDBsum:2VHO
            PDBsum:2VHP PDBsum:2WWL PDBsum:2YKR PDBsum:2Z4K PDBsum:2Z4M
            PDBsum:3DF1 PDBsum:3DF3 PDBsum:3E1A PDBsum:3E1C PDBsum:3I1M
            PDBsum:3I1O PDBsum:3I1Q PDBsum:3I1S PDBsum:3I1Z PDBsum:3I21
            PDBsum:3J0U PDBsum:3J0V PDBsum:3J0X PDBsum:3J0Z PDBsum:3J10
            PDBsum:3J13 PDBsum:3J18 PDBsum:3KC4 PDBsum:3OAQ PDBsum:3OAR
            PDBsum:3OFA PDBsum:3OFB PDBsum:3OFO PDBsum:3OFP PDBsum:3OFX
            PDBsum:3OFY PDBsum:3OR9 PDBsum:3ORA PDBsum:4A2I PDBsum:4ADV
            PDBsum:4GAQ PDBsum:4GD2 HOGENOM:HOG000040063 OMA:SCPERRG
            ProtClustDB:PRK05163 EMBL:V00355 EMBL:AF312716 EMBL:AF312717
            EMBL:V00354 EMBL:J01688 PIR:S13738 RefSeq:NP_417801.1
            RefSeq:YP_492090.1 PDB:1MJ1 PDBsum:1MJ1 ProteinModelPortal:P0A7S3
            SMR:P0A7S3 DIP:DIP-35806N IntAct:P0A7S3 PRIDE:P0A7S3
            EnsemblBacteria:EBESCT00000002185 EnsemblBacteria:EBESCT00000016331
            GeneID:12932620 GeneID:947845 KEGG:ecj:Y75_p3834 KEGG:eco:b3342
            PATRIC:32122116 EchoBASE:EB0904 EcoGene:EG10911
            BioCyc:EcoCyc:EG10911-MONOMER BioCyc:ECOL316407:JW3304-MONOMER
            DrugBank:DB00479 DrugBank:DB00994 DrugBank:DB00955 DrugBank:DB00919
            DrugBank:DB01082 DrugBank:DB00684 EvolutionaryTrace:P0A7S3
            Genevestigator:P0A7S3 GO:GO:0034336 Uniprot:P0A7S3
        Length = 124

 Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
 Identities = 29/53 (54%), Positives = 37/53 (69%)

Query:    25 GKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLPHVVKKTQ 77
             G E+ +YI GEGHNLQEH+++L + GRVKDLPGV+   VRG  D   V  + Q
Sbjct:    60 GFEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGALDCSGVKDRKQ 112


>UNIPROTKB|Q9KUZ9 [details] [associations]
            symbol:rpsL "30S ribosomal protein S12" species:243277
            "Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
            "structural constituent of ribosome" evidence=ISS] [GO:0006412
            "translation" evidence=ISS] InterPro:IPR005679 InterPro:IPR006032
            Pfam:PF00164 PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055
            GO:GO:0006412 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003735
            Gene3D:2.40.50.140 InterPro:IPR012340 GO:GO:0000049 SUPFAM:SSF50249
            GO:GO:0019843 GO:GO:0015935 HAMAP:MF_00403_B PANTHER:PTHR11652
            TIGRFAMs:TIGR00981 eggNOG:COG0048 KO:K02950 OMA:SCPERRG
            ProtClustDB:PRK05163 PIR:A82332 RefSeq:NP_230013.1
            ProteinModelPortal:Q9KUZ9 SMR:Q9KUZ9 DNASU:2615038 GeneID:2615038
            KEGG:vch:VC0359 PATRIC:20079791 Uniprot:Q9KUZ9
        Length = 124

 Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
 Identities = 30/53 (56%), Positives = 37/53 (69%)

Query:    25 GKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLPHVVKKTQ 77
             G E+ +YI GEGHNLQEH++VL + GRVKDLPGV+   VRG  D   V  + Q
Sbjct:    60 GFEVTSYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGALDCAGVNDRKQ 112


>TIGR_CMR|CPS_4767 [details] [associations]
            symbol:CPS_4767 "ribosomal protein S12" species:167879
            "Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
            of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            [GO:0015935 "small ribosomal subunit" evidence=ISS]
            InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
            PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 GO:GO:0006412
            EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0003735
            Gene3D:2.40.50.140 InterPro:IPR012340 GO:GO:0000049 SUPFAM:SSF50249
            GO:GO:0019843 GO:GO:0015935 HAMAP:MF_00403_B PANTHER:PTHR11652
            TIGRFAMs:TIGR00981 eggNOG:COG0048 KO:K02950 HOGENOM:HOG000040063
            OMA:SCPERRG ProtClustDB:PRK05163 RefSeq:YP_271411.1
            ProteinModelPortal:Q47UW1 SMR:Q47UW1 STRING:Q47UW1 GeneID:3520613
            KEGG:cps:CPS_4767 PATRIC:21472351
            BioCyc:CPSY167879:GI48-4773-MONOMER Uniprot:Q47UW1
        Length = 124

 Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
 Identities = 29/53 (54%), Positives = 37/53 (69%)

Query:    25 GKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLPHVVKKTQ 77
             G E+ +YI GEGHNLQEH+++L + GRVKDLPGV+   VRG  D   V  + Q
Sbjct:    60 GFEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGALDCSGVSDRRQ 112


>TIGR_CMR|VC_0359 [details] [associations]
            symbol:VC_0359 "ribosomal protein S12" species:686 "Vibrio
            cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
            ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
            PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 GO:GO:0006412
            EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003735
            Gene3D:2.40.50.140 InterPro:IPR012340 GO:GO:0000049 SUPFAM:SSF50249
            GO:GO:0019843 GO:GO:0015935 HAMAP:MF_00403_B PANTHER:PTHR11652
            TIGRFAMs:TIGR00981 eggNOG:COG0048 KO:K02950 OMA:SCPERRG
            ProtClustDB:PRK05163 PIR:A82332 RefSeq:NP_230013.1
            ProteinModelPortal:Q9KUZ9 SMR:Q9KUZ9 DNASU:2615038 GeneID:2615038
            KEGG:vch:VC0359 PATRIC:20079791 Uniprot:Q9KUZ9
        Length = 124

 Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
 Identities = 30/53 (56%), Positives = 37/53 (69%)

Query:    25 GKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLPHVVKKTQ 77
             G E+ +YI GEGHNLQEH++VL + GRVKDLPGV+   VRG  D   V  + Q
Sbjct:    60 GFEVTSYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGALDCAGVNDRKQ 112


>TIGR_CMR|CHY_2315 [details] [associations]
            symbol:CHY_2315 "ribosomal protein S12" species:246194
            "Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
            constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
            evidence=ISS] InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
            PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 EMBL:CP000141
            GenomeReviews:CP000141_GR GO:GO:0006412 GO:GO:0003735
            Gene3D:2.40.50.140 InterPro:IPR012340 GO:GO:0000049 SUPFAM:SSF50249
            GO:GO:0019843 GO:GO:0015935 HAMAP:MF_00403_B PANTHER:PTHR11652
            TIGRFAMs:TIGR00981 eggNOG:COG0048 KO:K02950 HOGENOM:HOG000040063
            OMA:SCPERRG ProtClustDB:PRK05163 RefSeq:YP_361124.1
            ProteinModelPortal:Q3A9R0 SMR:Q3A9R0 STRING:Q3A9R0 PRIDE:Q3A9R0
            GeneID:3728085 KEGG:chy:CHY_2315 PATRIC:21277699
            BioCyc:CHYD246194:GJCN-2314-MONOMER Uniprot:Q3A9R0
        Length = 126

 Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
 Identities = 30/53 (56%), Positives = 36/53 (67%)

Query:    25 GKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLPHVVKKTQ 77
             G E+ AYI G GHNLQEH++VL + GRVKDLPGV+   VRG  D   V  + Q
Sbjct:    60 GIEVTAYIGGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGALDCAGVQNRNQ 112


>POMBASE|SPAC4F8.06 [details] [associations]
            symbol:SPAC4F8.06 "mitochondrial ribosomal protein
            subunit S12 (predicted)" species:4896 "Schizosaccharomyces pombe"
            [GO:0003735 "structural constituent of ribosome" evidence=ISS]
            [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005763
            "mitochondrial small ribosomal subunit" evidence=ISS] [GO:0006412
            "translation" evidence=ISS] [GO:0032543 "mitochondrial translation"
            evidence=NAS] InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
            PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 PomBase:SPAC4F8.06
            EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003735 GO:GO:0032543
            Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0005763
            PANTHER:PTHR11652 TIGRFAMs:TIGR00981 eggNOG:COG0048
            HOGENOM:HOG000040063 PIR:T38836 RefSeq:NP_593866.2 HSSP:Q5SHN3
            STRING:O14182 EnsemblFungi:SPAC4F8.06.1 GeneID:2543614
            OrthoDB:EOG4CZFRD NextBio:20804620 Uniprot:O14182
        Length = 162

 Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query:    25 GKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLPHV 72
             G+ + AYIPG GHN QEH +VL + GR +D PGV+   VRGVYD+  V
Sbjct:    97 GRSVTAYIPGIGHNAQEHAVVLLRGGRAQDCPGVQYHVVRGVYDIAGV 144


>UNIPROTKB|P28520 [details] [associations]
            symbol:RPS12 "Ribosomal protein S12, mitochondrial"
            species:39947 "Oryza sativa Japonica Group" [GO:0005739
            "mitochondrion" evidence=IC;ISS] InterPro:IPR005679
            InterPro:IPR006032 Pfam:PF00164 PIRSF:PIRSF002133 PRINTS:PR01034
            PROSITE:PS00055 GO:GO:0005739 GO:GO:0006412 GO:GO:0003735
            Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0015935
            EMBL:D21251 EMBL:D32052 PANTHER:PTHR11652 TIGRFAMs:TIGR00981
            eggNOG:COG0048 HOGENOM:HOG000040063 EMBL:M57904 PIR:S17913
            RefSeq:YP_002000567.1 ProteinModelPortal:P28520 SMR:P28520
            STRING:P28520 EnsemblPlants:LOC_Os12g33924.1
            EnsemblPlants:LOC_Os12g34062.1 EnsemblPlants:LOC_Os12g34144.1
            EnsemblPlants:LOC_Osm1g00290.1 GeneID:6450201 KEGG:osa:6450201
            Gramene:P28520 OMA:SHRIRGV Uniprot:P28520
        Length = 125

 Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
 Identities = 28/43 (65%), Positives = 34/43 (79%)

Query:    27 EMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDL 69
             ++ A+IPGEGHN QEH+IVL + GRVKD PGVK   +RGV DL
Sbjct:    62 DIFAHIPGEGHNSQEHSIVLVRGGRVKDSPGVKSHRIRGVKDL 104


>UNIPROTKB|Q2F983 [details] [associations]
            symbol:rps12 "Ribosomal protein S12" species:39946 "Oryza
            sativa Indica Group" [GO:0005739 "mitochondrion" evidence=IC]
            InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
            PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 GO:GO:0005739
            GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
            SUPFAM:SSF50249 EMBL:DQ167399 GO:GO:0015935 HAMAP:MF_00403_B
            PANTHER:PTHR11652 TIGRFAMs:TIGR00981 EMBL:JN861111 EMBL:JN861112
            EMBL:JF281153 EMBL:JF281154 EMBL:AP011077 RefSeq:YP_514650.1
            ProteinModelPortal:Q2F983 SMR:Q2F983 GeneID:3950682 Gramene:Q2F983
            Uniprot:Q2F983
        Length = 125

 Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
 Identities = 28/43 (65%), Positives = 34/43 (79%)

Query:    27 EMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDL 69
             ++ A+IPGEGHN QEH+IVL + GRVKD PGVK   +RGV DL
Sbjct:    62 DIFAHIPGEGHNSQEHSIVLVRGGRVKDSPGVKSHRIRGVKDL 104


>UNIPROTKB|Q7JAI8 [details] [associations]
            symbol:rps12 "Ribosomal protein S12" species:39947 "Oryza
            sativa Japonica Group" [GO:0005739 "mitochondrion" evidence=IC]
            InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
            PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 GO:GO:0005739
            GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
            SUPFAM:SSF50249 EMBL:BA000029 GenomeReviews:BA000029_GR
            EMBL:DQ167807 EMBL:DQ167400 GO:GO:0015935 HAMAP:MF_00403_B
            PANTHER:PTHR11652 TIGRFAMs:TIGR00981 RefSeq:YP_002000567.1
            EnsemblPlants:LOC_Os12g33924.1 EnsemblPlants:LOC_Os12g34062.1
            EnsemblPlants:LOC_Os12g34144.1 EnsemblPlants:LOC_Osm1g00290.1
            GeneID:6450201 KEGG:osa:6450201 OMA:SHRIRGV SMR:Q7JAI8
            STRING:Q7JAI8 Uniprot:Q7JAI8
        Length = 125

 Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
 Identities = 28/43 (65%), Positives = 34/43 (79%)

Query:    27 EMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDL 69
             ++ A+IPGEGHN QEH+IVL + GRVKD PGVK   +RGV DL
Sbjct:    62 DIFAHIPGEGHNSQEHSIVLVRGGRVKDSPGVKSHRIRGVKDL 104


>SGD|S000005319 [details] [associations]
            symbol:MRPS12 "Mitochondrial protein" species:4932
            "Saccharomyces cerevisiae" [GO:0003735 "structural constituent of
            ribosome" evidence=IEA;ISA] [GO:0030529 "ribonucleoprotein complex"
            evidence=IEA] [GO:0005840 "ribosome" evidence=IEA;IDA] [GO:0005739
            "mitochondrion" evidence=IEA;IDA] [GO:0015935 "small ribosomal
            subunit" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0032543
            "mitochondrial translation" evidence=ISA] [GO:0005763
            "mitochondrial small ribosomal subunit" evidence=ISA]
            InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
            PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 SGD:S000005319
            EMBL:BK006947 GO:GO:0003735 GO:GO:0032543 Gene3D:2.40.50.140
            InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0005763 PANTHER:PTHR11652
            TIGRFAMs:TIGR00981 eggNOG:COG0048 HOGENOM:HOG000040063 OMA:SCPERRG
            GeneTree:ENSGT00550000075103 OrthoDB:EOG4CZFRD EMBL:Z71651
            EMBL:AY558003 PIR:S63367 RefSeq:NP_014434.1
            ProteinModelPortal:P53732 SMR:P53732 DIP:DIP-5562N IntAct:P53732
            MINT:MINT-574668 STRING:P53732 PaxDb:P53732 PeptideAtlas:P53732
            EnsemblFungi:YNR036C GeneID:855772 KEGG:sce:YNR036C CYGD:YNR036c
            NextBio:980226 Genevestigator:P53732 GermOnline:YNR036C
            Uniprot:P53732
        Length = 153

 Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
 Identities = 28/51 (54%), Positives = 35/51 (68%)

Query:    25 GKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLPHVVKK 75
             G  + AYIPGEGH+ QEH+IV  + GR +DLPGVK   +RG  DL  VV +
Sbjct:    88 GNVVSAYIPGEGHDAQEHSIVYVRGGRCQDLPGVKYHVIRGAGDLSGVVNR 138


>WB|WBGene00011391 [details] [associations]
            symbol:mrps-12 species:6239 "Caenorhabditis elegans"
            [GO:0003735 "structural constituent of ribosome" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
            ribosomal subunit" evidence=IEA] [GO:0005622 "intracellular"
            evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0009792
            "embryo development ending in birth or egg hatching" evidence=IMP]
            [GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
            development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
            InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
            PIRSF:PIRSF002133 PRINTS:PR01034 GO:GO:0009792 GO:GO:0040007
            GO:GO:0002119 GO:GO:0006412 GO:GO:0000003 GO:GO:0003735
            Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0015935
            EMBL:Z92838 PANTHER:PTHR11652 eggNOG:COG0048 HOGENOM:HOG000040063
            GeneTree:ENSGT00550000075103 PIR:T24380 RefSeq:NP_508023.1
            ProteinModelPortal:Q9XTY5 SMR:Q9XTY5 STRING:Q9XTY5 PaxDb:Q9XTY5
            EnsemblMetazoa:T03D8.2.1 EnsemblMetazoa:T03D8.2.2 GeneID:180368
            KEGG:cel:CELE_T03D8.2 UCSC:T03D8.2 CTD:180368 WormBase:T03D8.2
            InParanoid:Q9XTY5 OMA:ISVKANI NextBio:909068 Uniprot:Q9XTY5
        Length = 157

 Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
 Identities = 35/75 (46%), Positives = 41/75 (54%)

Query:     2 HMKGPHYKK--RPPRQPLLGKP------FAKGKEMVAYIPGEGHNLQEHNIVLCKVGRVK 53
             H KG   K   R P++P  G         + G E+ AYIP  GHNLQEH+ VL K GR +
Sbjct:    75 HYKGIVLKTVIRHPKKPNSGNRKCAIVRLSTGAEVCAYIPNVGHNLQEHSQVLVKGGRRR 134

Query:    54 DLPGVKIKCVRGVYD 68
             DL  VK   VRG YD
Sbjct:   135 DLISVKANIVRGKYD 149


>DICTYBASE|DDB_G0294074 [details] [associations]
            symbol:mrps12 "ribosomal protein S12, mitochondrial"
            species:44689 "Dictyostelium discoideum" [GO:0015935 "small
            ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
            evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0005622
            "intracellular" evidence=IEA] [GO:0003735 "structural constituent
            of ribosome" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
            evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
            InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
            PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055
            dictyBase:DDB_G0294074 GO:GO:0005739 GO:GO:0006412 GO:GO:0003735
            EMBL:AB000109 GenomeReviews:AB000109_GR Gene3D:2.40.50.140
            InterPro:IPR012340 SUPFAM:SSF50249 EMBL:D21196 GO:GO:0015935
            PANTHER:PTHR11652 TIGRFAMs:TIGR00981 eggNOG:COG0048 PIR:T43768
            RefSeq:NP_050089.1 ProteinModelPortal:Q23886 STRING:Q23886
            GeneID:2193917 KEGG:ddi:DidioMp22 Uniprot:Q23886
        Length = 140

 Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
 Identities = 27/46 (58%), Positives = 32/46 (69%)

Query:    24 KGKEMVAYIPGEG-HNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYD 68
             K K ++AYIPG G HNLQ  + VL K GR +DLPGVK + VR  YD
Sbjct:    61 KRKNLIAYIPGFGPHNLQPLSTVLVKGGRCQDLPGVKYRLVRKHYD 106


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.143   0.451    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       82        82   0.00091  102 3  11 22  0.45    29
                                                     29  0.43    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  36
  No. of states in DFA:  494 (53 KB)
  Total size of DFA:  101 KB (2072 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:01
  No. of threads or processors used:  24
  Search cpu time:  9.87u 0.09s 9.96t   Elapsed:  00:00:05
  Total cpu time:  9.87u 0.09s 9.96t   Elapsed:  00:00:06
  Start:  Thu Aug 15 12:21:48 2013   End:  Thu Aug 15 12:21:54 2013

the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with tko tko tko technical knockout	protein from Drosophila melanogaster	1.7e-20
BLAST match view associations BLAST with MRPS12 MRPS12 MRPS12 28S ribosomal protein S12, mitochondrial	protein from Homo sapiens	1.4e-17
BLAST match view associations BLAST with MRPS12 MRPS12 MRPS12 Uncharacterized protein	protein from Gallus gallus	2.9e-17
BLAST match view associations BLAST with si:dkey-17e16.10 si:dkey-17e16.10 si:dkey-17e16.10	gene_product from Danio rerio	7.7e-16
BLAST match view associations BLAST with MRPS12 MRPS12 MRPS12 28S ribosomal protein S12, mitochondrial	protein from Bos taurus	1.8e-14
BLAST match view associations BLAST with Mrps12 Mrps12 Mrps12 mitochondrial ribosomal protein S12	protein from Mus musculus	3.8e-14
BLAST match view associations BLAST with Mrps12 Mrps12 Mrps12 mitochondrial ribosomal protein S12	gene from Rattus norvegicus	3.8e-14
BLAST match view associations BLAST with MRPS12 MRPS12 MRPS12 Uncharacterized protein	protein from Canis lupus familiaris	2.7e-13
BLAST match view associations BLAST with NSE_0689 NSE_0689 NSE_0689 ribosomal protein S12	protein from Neorickettsia sennetsu str. Miyayama	1.2e-12
BLAST match view associations BLAST with CJE_0540 CJE_0540 CJE_0540 ribosomal protein S12	protein from Campylobacter jejuni RM1221	1.5e-12
BLAST match view associations BLAST with APH_1035 APH_1035 APH_1035 ribosomal protein S12	protein from Anaplasma phagocytophilum str. HZ	1.9e-12
BLAST match view associations BLAST with ECH_0963 ECH_0963 ECH_0963 ribosomal protein S12	protein from Ehrlichia chaffeensis str. Arkansas	3.1e-12
BLAST match view associations BLAST with rpsL rpsL rpsL 30S ribosomal protein S12	protein from Mycobacterium tuberculosis	5.0e-12
BLAST match view associations BLAST with BA_0105 BA_0105 BA_0105 ribosomal protein S12	protein from Bacillus anthracis str. Ames	8.2e-12
BLAST match view associations BLAST with SPO_3501 SPO_3501 SPO_3501 ribosomal protein S12	protein from Ruegeria pomeroyi DSS-3	1.0e-11
BLAST match view associations BLAST with rps12-A rps12-A rps12-A 30S ribosomal protein S12, chloroplastic	protein from Oryza sativa	1.7e-11
BLAST match view associations BLAST with rps12-A rps12-A rps12-A 30S ribosomal protein S12, chloroplastic	protein from Oryza sativa Indica Group	1.7e-11
BLAST match view associations BLAST with rps12-A rps12-A rps12-A 30S ribosomal protein S12, chloroplastic	protein from Oryza sativa Japonica Group	1.7e-11
BLAST match view associations BLAST with rps12 rps12 rps12 30S ribosomal protein S12, chloroplastic	protein from Oryza nivara	1.7e-11
BLAST match view associations BLAST with DET_0470 DET_0470 DET_0470 ribosomal protein S12	protein from Dehalococcoides ethenogenes 195	2.2e-11
BLAST match view associations BLAST with SO_0226 SO_0226 SO_0226 ribosomal protein S12	protein from Shewanella oneidensis MR-1	4.5e-11
BLAST match view associations BLAST with orf19.2438 orf19.2438 orf19.2438	gene_product from Candida albicans	5.8e-11
BLAST match view associations BLAST with CBU_0233 CBU_0233 CBU_0233 ribosomal protein S12	protein from Coxiella burnetii RSA 493	7.4e-11
BLAST match view associations BLAST with rpsL rpsL rpsL	protein from Escherichia coli K-12	9.4e-11
BLAST match view associations BLAST with rpsL rpsL rpsL 30S ribosomal protein S12	protein from Vibrio cholerae O1 biovar El Tor str. N16961	9.4e-11
BLAST match view associations BLAST with CPS_4767 CPS_4767 CPS_4767 ribosomal protein S12	protein from Colwellia psychrerythraea 34H	9.4e-11
BLAST match view associations BLAST with VC_0359 VC_0359 VC_0359 ribosomal protein S12	protein from Vibrio cholerae O1 biovar El Tor	9.4e-11
BLAST match view associations BLAST with CHY_2315 CHY_2315 CHY_2315 ribosomal protein S12	protein from Carboxydothermus hydrogenoformans Z-2901	1.5e-10
BLAST match view associations BLAST with RPS12 RPS12 RPS12 Ribosomal protein S12, mitochondrial	protein from Oryza sativa Japonica Group	5.2e-10
BLAST match view associations BLAST with rps12 rps12 rps12 Ribosomal protein S12	protein from Oryza sativa Indica Group	5.2e-10
BLAST match view associations BLAST with rps12 rps12 rps12 Ribosomal protein S12	protein from Oryza sativa Japonica Group	5.2e-10
BLAST match view associations BLAST with MRPS12 MRPS12 MRPS12 Mitochondrial protein	gene from Saccharomyces cerevisiae	6.6e-10
BLAST match view associations BLAST with mrps-12 mrps-12 mrps-12	gene from Caenorhabditis elegans	5.9e-09
BLAST match view associations BLAST with mrps12 mrps12 mrps12 ribosomal protein S12, mitochondrial	gene from Dictyostelium discoideum	6.8e-08