BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16456
(112 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q12889|OVGP1_HUMAN Oviduct-specific glycoprotein OS=Homo sapiens GN=OVGP1 PE=2 SV=1
Length = 678
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 57/99 (57%), Gaps = 8/99 (8%)
Query: 18 GHRGLTSGH---RGLTSGHRG--LTSGRRGLTSGRKALTSGHRSLTSGRRGLTS-GRKAL 71
G G+T H +T RG +T + ++ G+ + G ++ +G +TS G +++
Sbjct: 428 GEAGVTEIHGKCENMTITPRGTTVTPTKETVSLGKHTVALGEKTEITGAMTMTSVGHQSM 487
Query: 72 TSGHRGLTS-GHRSLTSGRRALTS-GHKTLTSGHRGLTS 108
T G + LT GH+S+T+G++ LTS G++++T G + LT
Sbjct: 488 TPGEKALTPVGHQSVTTGQKTLTSVGYQSVTPGEKTLTP 526
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 2 ATGHRGLTSGRRGLTS-GHRGLTSGHRGLTS-GHRGLTS-GRRGLTSGRKALTSGHRSLT 58
GH+ +T+G++ LTS G++ +T G + LT GH+ +T + ++ G +T H
Sbjct: 496 PVGHQSVTTGQKTLTSVGYQSVTPGEKTLTPVGHQSVTPVSHQSVSPGGTTMTPVHFQTE 555
Query: 59 SGRRGLTSGRK 69
+ R+ + R+
Sbjct: 556 TLRQNTVAPRR 566
>sp|P36718|OVGP1_PAPAN Oviduct-specific glycoprotein OS=Papio anubis GN=OVGP1 PE=2 SV=2
Length = 623
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 39 GRRGLTSGRKALTS-GHRSLTSGRRGLT--------SGRKALTS-GHRGLTSGHRSLTS- 87
G + +G +TS GH+S+T G + LT G+K LT GH+ +T+G ++L S
Sbjct: 468 GEKTEITGATTMTSVGHQSMTPGEKALTPVGHQSELPGKKTLTPVGHQSVTTGQKTLISV 527
Query: 88 GRRALTSGHKTLTS-GHRGLTS 108
G ++T G KTLT GH +T
Sbjct: 528 GYHSVTPGEKTLTPVGHPSVTP 549
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 50 LTSGHRSLTSGRRGLTSGRKALTSGHRGLTS-GHRSLTSGRRALTS-GHKTLTSGHRGLT 107
+T +++ G+ + G K +G +TS GH+S+T G +ALT GH++ G + LT
Sbjct: 451 VTPTKETVSLGKHTVALGEKTEITGATTMTSVGHQSMTPGEKALTPVGHQSELPGKKTLT 510
Query: 108 S 108
Sbjct: 511 P 511
>sp|P32399|YHGE_BACSU Uncharacterized protein YhgE OS=Bacillus subtilis (strain 168)
GN=yhgE PE=4 SV=2
Length = 775
Score = 36.6 bits (83), Expect = 0.043, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 40/95 (42%)
Query: 8 LTSGRRGLTSGHRGLTSGHRGLTSGHRGLTSGRRGLTSGRKALTSGHRSLTSGRRGLTSG 67
L +G + + LT G + +G + LT G+ LT+G +G L +G
Sbjct: 433 LYNGAKTIQDAIDRLTEGADKIYNGSQKLTDGQTKLTAGIGEYNKQFAKAKAGSEQLVTG 492
Query: 68 RKALTSGHRGLTSGHRSLTSGRRALTSGHKTLTSG 102
++ G L G + + SG L G +L +G
Sbjct: 493 SSQVSGGLFKLLDGSKQVQSGSSKLADGSASLDTG 527
>sp|P50469|M22_STRPY M protein, serotype 2.2 OS=Streptococcus pyogenes GN=emmL2.2 PE=3
SV=1
Length = 372
Score = 35.0 bits (79), Expect = 0.15, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 53/99 (53%)
Query: 10 SGRRGLTSGHRGLTSGHRGLTSGHRGLTSGRRGLTSGRKALTSGHRSLTSGRRGLTSGRK 69
+ ++ L + H+ L + ++ LT G++ + R+GL++ +A + + L + + L + +
Sbjct: 149 TAKKELEAKHQKLEAENKKLTEGNQVSEASRKGLSNDLEASRAAKKELEAKYQKLETDHQ 208
Query: 70 ALTSGHRGLTSGHRSLTSGRRALTSGHKTLTSGHRGLTS 108
AL + H+ L + ++ + R+ L+ + ++ +TS
Sbjct: 209 ALEAKHQKLEADYQVSETSRKGLSRDLEASREANKKVTS 247
Score = 33.9 bits (76), Expect = 0.30, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 48/98 (48%)
Query: 10 SGRRGLTSGHRGLTSGHRGLTSGHRGLTSGRRGLTSGRKALTSGHRSLTSGRRGLTSGRK 69
+ R+GL+ + + L + H+ L + + LT G + + + L++ + +K
Sbjct: 135 ASRKGLSRDLEASRTAKKELEAKHQKLEAENKKLTEGNQVSEASRKGLSNDLEASRAAKK 194
Query: 70 ALTSGHRGLTSGHRSLTSGRRALTSGHKTLTSGHRGLT 107
L + ++ L + H++L + + L + ++ + +GL+
Sbjct: 195 ELEAKYQKLETDHQALEAKHQKLEADYQVSETSRKGLS 232
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 46/95 (48%)
Query: 6 RGLTSGRRGLTSGHRGLTSGHRGLTSGHRGLTSGRRGLTSGRKALTSGHRSLTSGRRGLT 65
+GL+ + + L + H+ L + ++ LT G + + RK L++ + + ++ L
Sbjct: 138 KGLSRDLEASRTAKKELEAKHQKLEAENKKLTEGNQVSEASRKGLSNDLEASRAAKKELE 197
Query: 66 SGRKALTSGHRGLTSGHRSLTSGRRALTSGHKTLT 100
+ + L + H+ L + H+ L + + + K L+
Sbjct: 198 AKYQKLETDHQALEAKHQKLEADYQVSETSRKGLS 232
>sp|Q6ZQQ6|WDR87_HUMAN WD repeat-containing protein 87 OS=Homo sapiens GN=WDR87 PE=1 SV=3
Length = 2873
Score = 33.1 bits (74), Expect = 0.48, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 35/93 (37%), Gaps = 2/93 (2%)
Query: 8 LTSGRRGLTSGHRGLTSGHRGLTSGHRGLTSGRRGLTSGRKALTSGHRSLTSGRRGLTSG 67
L G+ L+ G TS R +T + L R L+ K L R L + G
Sbjct: 1977 LVEGKETLSKGETPETSRQRKMTQVEQELF--ERKLSLEEKILLHEDRILAMEESEIAKG 2034
Query: 68 RKALTSGHRGLTSGHRSLTSGRRALTSGHKTLT 100
+ T G R G R L R L ++L+
Sbjct: 2035 KLEFTRGQRIFVQGQRKLAKASRKLIKKRESLS 2067
>sp|Q9FMV3|Y5349_ARATH CBS domain-containing protein CBSCBSPB1 OS=Arabidopsis thaliana
GN=CBSCBSPB1 PE=1 SV=1
Length = 543
Score = 32.7 bits (73), Expect = 0.71, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 40 RRGLTSGRKALTSGHRSLTSGRRGLTSGRKALTSGHR--GLTSGHRSLTSGR--RALT 93
RR L+ +L +S+ RGL +GR++LT GLT G R++ R +ALT
Sbjct: 8 RRSLSVTTASLHGKKKSMDMAERGLDTGRRSLTVSRSPLGLTGGERTVKRLRLSKALT 65
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 55 RSLTSGRRGLTSGRKALTSGHRGLTSGHRSLTSGRR--ALTSGHKTL 99
RSL+ L +K++ RGL +G RSLT R LT G +T+
Sbjct: 9 RSLSVTTASLHGKKKSMDMAERGLDTGRRSLTVSRSPLGLTGGERTV 55
>sp|Q5M9G3|CAPR1_RAT Caprin-1 OS=Rattus norvegicus GN=Caprin1 PE=1 SV=2
Length = 707
Score = 32.0 bits (71), Expect = 1.0, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 6 RGLTSGRRGLTSGHRGLTSGHRGLTSGHR 34
RG + G RGL +G+RG +G RG G+R
Sbjct: 610 RGGSRGARGLMNGYRGPANGFRGGYDGYR 638
>sp|Q60865|CAPR1_MOUSE Caprin-1 OS=Mus musculus GN=Caprin1 PE=1 SV=2
Length = 707
Score = 32.0 bits (71), Expect = 1.0, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 6 RGLTSGRRGLTSGHRGLTSGHRGLTSGHR 34
RG + G RGL +G+RG +G RG G+R
Sbjct: 610 RGGSRGARGLMNGYRGPANGFRGGYDGYR 638
>sp|Q14444|CAPR1_HUMAN Caprin-1 OS=Homo sapiens GN=CAPRIN1 PE=1 SV=2
Length = 709
Score = 32.0 bits (71), Expect = 1.0, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 6 RGLTSGRRGLTSGHRGLTSGHRGLTSGHR 34
RG + G RGL +G+RG +G RG G+R
Sbjct: 612 RGGSRGARGLMNGYRGPANGFRGGYDGYR 640
>sp|Q1LZB6|CAPR1_BOVIN Caprin-1 OS=Bos taurus GN=CAPRIN1 PE=2 SV=1
Length = 708
Score = 32.0 bits (71), Expect = 1.0, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 6 RGLTSGRRGLTSGHRGLTSGHRGLTSGHR 34
RG + G RGL +G+RG +G RG G+R
Sbjct: 610 RGGSRGARGLMNGYRGPANGFRGGYDGYR 638
>sp|Q8BGJ3|CQ100_MOUSE Uncharacterized protein C17orf100 homolog OS=Mus musculus PE=2
SV=1
Length = 129
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 24/46 (52%)
Query: 8 LTSGRRGLTSGHRGLTSGHRGLTSGHRGLTSGRRGLTSGRKALTSG 53
+ S R TS R TS HR TS HR TS R+ TS R+ TS
Sbjct: 17 VESTRHKETSTVRVETSSHREETSSHRVETSSRQVRTSSRQVETSQ 62
Score = 28.9 bits (63), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 57 LTSGRRGLTSGRKALTSGHRGLTSGHRSLTSGRRALTSGHKTLTSG-HRG 105
+ S R TS + TS HR TS HR TS R+ TS + TS HR
Sbjct: 17 VESTRHKETSTVRVETSSHREETSSHRVETSSRQVRTSSRQVETSQRHRE 66
>sp|Q5SNZ0|GRDN_MOUSE Girdin OS=Mus musculus GN=Ccdc88a PE=1 SV=2
Length = 1873
Score = 30.0 bits (66), Expect = 4.3, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 31/78 (39%)
Query: 29 LTSGHRGLTSGRRGLTSGRKALTSGHRSLTSGRRGLTSGRKALTSGHRGLTSGHRSLTSG 88
L S L + L + +L + + S+ R L S AL H L H S
Sbjct: 1114 LNSQSTSLMNQNAQLLIQQSSLENENESIMKEREDLKSLYDALIKDHEKLELLHERQASE 1173
Query: 89 RRALTSGHKTLTSGHRGL 106
+L S H TL S H+ L
Sbjct: 1174 YESLISKHGTLKSAHKNL 1191
>sp|Q7L2R6|ZN765_HUMAN Zinc finger protein 765 OS=Homo sapiens GN=ZNF765 PE=2 SV=2
Length = 523
Score = 28.9 bits (63), Expect = 8.8, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 7/88 (7%)
Query: 26 HRGLTSGHRGLTSGRRGLTSGRKALTSGHRSLTSGRR-------GLTSGRKALTSGHRGL 78
HR + +G + G T +K+ + HR L +G + G T RK+ + H +
Sbjct: 317 HRRIHTGEKPYKCNECGKTFSQKSYLTCHRRLHTGEKPYKCNECGKTFSRKSHFTCHHRV 376
Query: 79 TSGHRSLTSGRRALTSGHKTLTSGHRGL 106
+G + + T HK+ + HR L
Sbjct: 377 HTGEKPYKCNECSKTFSHKSSLTYHRRL 404
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.131 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,415,468
Number of Sequences: 539616
Number of extensions: 1466327
Number of successful extensions: 5217
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 4490
Number of HSP's gapped (non-prelim): 479
length of query: 112
length of database: 191,569,459
effective HSP length: 80
effective length of query: 32
effective length of database: 148,400,179
effective search space: 4748805728
effective search space used: 4748805728
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)