Query psy16459
Match_columns 143
No_of_seqs 166 out of 1411
Neff 7.6
Searched_HMMs 46136
Date Fri Aug 16 21:50:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16459.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/16459hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1163|consensus 99.8 2.9E-21 6.3E-26 149.6 8.6 111 13-143 13-123 (341)
2 KOG1165|consensus 99.8 5E-20 1.1E-24 147.8 8.5 109 15-143 28-136 (449)
3 KOG1164|consensus 99.8 2.7E-18 5.8E-23 137.6 10.7 111 16-143 19-134 (322)
4 KOG1165|consensus 99.4 5.2E-14 1.1E-18 113.4 2.1 85 9-104 66-162 (449)
5 KOG1163|consensus 99.1 5.5E-11 1.2E-15 92.8 3.1 80 13-103 57-148 (341)
6 KOG1164|consensus 98.7 1.8E-08 4E-13 80.7 4.4 84 12-103 62-159 (322)
7 KOG0667|consensus 98.4 1.3E-06 2.9E-11 75.1 8.6 113 11-142 182-300 (586)
8 cd05629 STKc_NDR_like_fungal C 98.3 5.1E-06 1.1E-10 67.3 10.2 110 16-142 2-112 (377)
9 cd05597 STKc_DMPK_like Catalyt 98.3 5.9E-06 1.3E-10 65.9 10.0 111 16-142 2-113 (331)
10 cd05615 STKc_cPKC_alpha Cataly 98.3 6.3E-06 1.4E-10 65.5 9.9 110 17-142 2-112 (323)
11 cd06617 PKc_MKK3_6 Catalytic d 98.3 1.4E-05 3.1E-10 61.3 11.4 110 16-142 2-114 (283)
12 cd05587 STKc_cPKC Catalytic do 98.3 9.2E-06 2E-10 64.5 10.3 111 16-142 1-112 (324)
13 cd05066 PTKc_EphR_A Catalytic 98.3 9.1E-06 2E-10 62.3 9.9 110 16-142 5-117 (267)
14 cd07869 STKc_PFTAIRE1 Catalyti 98.3 1.2E-05 2.5E-10 63.1 10.4 109 16-142 6-114 (303)
15 cd05600 STKc_Sid2p_Dbf2p Catal 98.3 1.1E-05 2.3E-10 64.2 10.2 110 16-142 2-112 (333)
16 cd05605 STKc_GRK4_like Catalyt 98.3 1.3E-05 2.9E-10 62.3 10.5 109 17-142 2-113 (285)
17 cd05626 STKc_LATS2 Catalytic d 98.2 8.9E-06 1.9E-10 66.2 9.6 109 17-142 3-112 (381)
18 cd05599 STKc_NDR_like Catalyti 98.2 6.3E-06 1.4E-10 66.2 8.5 110 16-142 2-112 (364)
19 cd05628 STKc_NDR1 Catalytic do 98.2 1.5E-05 3.3E-10 64.3 10.3 110 16-142 2-112 (363)
20 cd07871 STKc_PCTAIRE3 Catalyti 98.2 2E-05 4.3E-10 61.4 10.5 109 16-142 6-114 (288)
21 PHA03209 serine/threonine kina 98.2 9.6E-06 2.1E-10 65.5 9.0 102 16-142 67-168 (357)
22 PHA03212 serine/threonine kina 98.2 1.2E-05 2.5E-10 66.2 9.5 103 14-142 91-193 (391)
23 cd07873 STKc_PCTAIRE1 Catalyti 98.2 2.6E-05 5.6E-10 60.9 11.1 109 16-142 7-115 (301)
24 cd07832 STKc_CCRK Catalytic do 98.2 3.5E-05 7.6E-10 59.2 11.6 109 17-142 2-110 (286)
25 cd06618 PKc_MKK7 Catalytic dom 98.2 1.5E-05 3.3E-10 62.1 9.7 110 16-142 16-125 (296)
26 cd05573 STKc_ROCK_NDR_like Cat 98.2 1E-05 2.2E-10 64.5 8.6 110 16-142 2-112 (350)
27 cd05580 STKc_PKA Catalytic dom 98.2 1.8E-05 3.9E-10 61.5 9.7 110 16-142 2-112 (290)
28 cd05088 PTKc_Tie2 Catalytic do 98.2 1.7E-05 3.7E-10 62.3 9.5 112 16-142 8-135 (303)
29 cd07872 STKc_PCTAIRE2 Catalyti 98.2 3.7E-05 8.1E-10 60.3 11.4 109 16-142 7-115 (309)
30 cd05065 PTKc_EphR_B Catalytic 98.2 4.6E-05 1E-09 58.3 11.5 110 16-142 5-117 (269)
31 cd05624 STKc_MRCK_beta Catalyt 98.2 2.7E-05 5.9E-10 62.1 10.5 111 16-142 2-113 (331)
32 cd05616 STKc_cPKC_beta Catalyt 98.2 2.6E-05 5.6E-10 61.9 10.3 110 17-142 2-112 (323)
33 cd05598 STKc_LATS Catalytic do 98.1 3.4E-05 7.5E-10 62.4 11.1 109 17-142 3-112 (376)
34 cd05574 STKc_phototropin_like 98.1 4E-05 8.6E-10 60.2 11.2 111 16-142 2-114 (316)
35 cd06638 STKc_myosinIIIA Cataly 98.1 5.1E-05 1.1E-09 58.5 11.6 115 9-142 12-135 (286)
36 cd05064 PTKc_EphR_A10 Catalyti 98.1 4.6E-05 1E-09 58.5 11.2 110 16-142 6-118 (266)
37 cd05601 STKc_CRIK Catalytic do 98.1 2.6E-05 5.7E-10 61.8 10.0 111 16-142 2-113 (330)
38 cd08227 PK_STRAD_alpha Pseudok 98.1 3.4E-05 7.4E-10 61.2 10.6 100 35-142 11-112 (327)
39 cd05627 STKc_NDR2 Catalytic do 98.1 3.1E-05 6.8E-10 62.4 10.5 110 16-142 2-112 (360)
40 cd07844 STKc_PCTAIRE_like Cata 98.1 3.9E-05 8.4E-10 59.4 10.7 109 16-142 6-114 (291)
41 PLN00009 cyclin-dependent kina 98.1 2.8E-05 6.1E-10 60.4 9.8 110 16-142 3-113 (294)
42 cd08219 STKc_Nek3 Catalytic do 98.1 7.1E-05 1.5E-09 56.7 11.8 108 17-142 2-111 (255)
43 cd07862 STKc_CDK6 Catalytic do 98.1 4E-05 8.7E-10 59.3 10.5 112 16-142 2-121 (290)
44 cd08529 STKc_FA2-like Catalyti 98.1 6.8E-05 1.5E-09 56.5 11.4 108 17-142 2-112 (256)
45 cd07841 STKc_CDK7 Catalytic do 98.1 2.2E-05 4.8E-10 60.9 8.8 101 37-142 13-113 (298)
46 cd06616 PKc_MKK4 Catalytic dom 98.1 4.1E-05 8.9E-10 59.2 10.2 99 36-142 16-118 (288)
47 cd06650 PKc_MEK1 Catalytic dom 98.1 6.5E-05 1.4E-09 60.0 11.4 109 15-142 5-114 (333)
48 cd06611 STKc_SLK_like Catalyti 98.1 3.4E-05 7.4E-10 59.4 9.5 108 16-142 6-114 (280)
49 cd07837 STKc_CdkB_plant Cataly 98.1 3.1E-05 6.8E-10 59.9 9.3 111 16-142 2-121 (295)
50 cd07831 STKc_MOK Catalytic dom 98.1 4.5E-05 9.9E-10 58.4 10.1 99 36-142 11-111 (282)
51 KOG0663|consensus 98.1 1.5E-05 3.2E-10 65.0 7.4 107 16-142 77-188 (419)
52 cd05607 STKc_GRK7 Catalytic do 98.1 4.6E-05 9.9E-10 59.0 9.9 100 36-142 5-106 (277)
53 cd05625 STKc_LATS1 Catalytic d 98.1 3E-05 6.5E-10 63.0 9.1 109 17-142 3-112 (382)
54 cd05063 PTKc_EphR_A2 Catalytic 98.0 4.7E-05 1E-09 58.1 9.6 110 16-142 6-118 (268)
55 cd06639 STKc_myosinIIIB Cataly 98.0 0.00011 2.5E-09 56.8 11.8 115 9-142 16-139 (291)
56 cd05619 STKc_nPKC_theta Cataly 98.0 4.8E-05 1E-09 60.4 9.8 100 36-142 7-107 (316)
57 PHA03211 serine/threonine kina 98.0 5.7E-05 1.2E-09 63.8 10.8 102 16-142 170-271 (461)
58 cd05592 STKc_nPKC_theta_delta 98.0 4.8E-05 1E-09 60.3 9.8 100 36-142 7-107 (316)
59 PF00069 Pkinase: Protein kina 98.0 2.6E-05 5.7E-10 58.8 7.8 98 36-142 11-109 (260)
60 cd07839 STKc_CDK5 Catalytic do 98.0 2.3E-05 4.9E-10 60.4 7.5 109 17-142 2-110 (284)
61 cd07836 STKc_Pho85 Catalytic d 98.0 7.2E-05 1.6E-09 57.5 10.3 108 17-142 2-111 (284)
62 cd05581 STKc_PDK1 Catalytic do 98.0 1.7E-05 3.8E-10 60.5 6.8 111 16-142 2-113 (280)
63 cd05084 PTKc_Fes Catalytic dom 98.0 9.8E-05 2.1E-09 55.8 10.9 98 36-142 7-105 (252)
64 cd07870 STKc_PFTAIRE2 Catalyti 98.0 9.3E-05 2E-09 57.3 11.0 109 16-142 6-114 (291)
65 cd06649 PKc_MEK2 Catalytic dom 98.0 0.00014 3.1E-09 57.9 12.3 110 14-142 4-114 (331)
66 cd07865 STKc_CDK9 Catalytic do 98.0 6.1E-05 1.3E-09 58.5 9.9 110 16-142 13-130 (310)
67 KOG0610|consensus 98.0 2.2E-05 4.7E-10 65.3 7.6 109 16-141 78-189 (459)
68 cd07848 STKc_CDKL5 Catalytic d 98.0 4E-05 8.7E-10 59.2 8.8 110 16-142 2-111 (287)
69 cd05631 STKc_GRK4 Catalytic do 98.0 8E-05 1.7E-09 57.9 10.5 110 17-142 2-113 (285)
70 PTZ00263 protein kinase A cata 98.0 8.5E-05 1.8E-09 59.2 10.9 111 15-142 18-129 (329)
71 cd05623 STKc_MRCK_alpha Cataly 98.0 7.4E-05 1.6E-09 59.5 10.5 111 16-142 2-113 (332)
72 cd05620 STKc_nPKC_delta Cataly 98.0 6.8E-05 1.5E-09 59.4 10.0 100 36-142 7-107 (316)
73 cd05617 STKc_aPKC_zeta Catalyt 98.0 5.5E-05 1.2E-09 60.2 9.5 100 36-142 7-107 (327)
74 PHA02882 putative serine/threo 98.0 7.9E-05 1.7E-09 58.3 10.2 120 12-142 9-137 (294)
75 cd05059 PTKc_Tec_like Catalyti 98.0 9.8E-05 2.1E-09 56.2 10.4 106 16-142 5-111 (256)
76 cd07863 STKc_CDK4 Catalytic do 98.0 5.6E-05 1.2E-09 58.3 9.2 110 17-142 2-119 (288)
77 PHA03390 pk1 serine/threonine- 98.0 7.8E-05 1.7E-09 57.5 9.9 91 37-142 29-120 (267)
78 cd05612 STKc_PRKX_like Catalyt 98.0 2.4E-05 5.2E-10 61.1 7.0 110 16-142 2-112 (291)
79 cd06615 PKc_MEK Catalytic doma 98.0 0.0002 4.2E-09 56.4 12.2 108 16-142 2-110 (308)
80 cd05630 STKc_GRK6 Catalytic do 98.0 6.5E-05 1.4E-09 58.5 9.4 99 37-142 13-113 (285)
81 cd08218 STKc_Nek1 Catalytic do 98.0 0.00018 3.8E-09 54.5 11.5 109 17-142 2-112 (256)
82 cd06636 STKc_MAP4K4_6 Catalyti 98.0 9E-05 1.9E-09 57.1 10.1 110 14-142 15-132 (282)
83 cd08220 STKc_Nek8 Catalytic do 98.0 0.00017 3.8E-09 54.3 11.4 108 17-142 2-112 (256)
84 cd05596 STKc_ROCK Catalytic do 98.0 9.5E-05 2.1E-09 60.1 10.4 110 15-142 43-153 (370)
85 cd06620 PKc_MAPKK_Byr1_like Ca 98.0 0.0001 2.2E-09 57.0 10.1 107 16-141 6-113 (284)
86 cd06645 STKc_MAP4K3 Catalytic 98.0 9.6E-05 2.1E-09 56.4 9.8 107 16-142 10-117 (267)
87 cd06640 STKc_MST4 Catalytic do 98.0 0.00012 2.6E-09 56.4 10.4 105 17-141 6-111 (277)
88 cd05033 PTKc_EphR Catalytic do 98.0 0.00024 5.2E-09 54.2 12.0 110 16-142 5-117 (266)
89 cd05588 STKc_aPKC Catalytic do 97.9 8E-05 1.7E-09 59.3 9.6 100 36-142 7-107 (329)
90 cd07845 STKc_CDK10 Catalytic d 97.9 0.00012 2.5E-09 57.4 10.1 110 16-142 8-119 (309)
91 cd05068 PTKc_Frk_like Catalyti 97.9 0.00015 3.3E-09 55.2 10.5 107 15-142 6-114 (261)
92 cd06613 STKc_MAP4K3_like Catal 97.9 0.00013 2.9E-09 55.1 10.1 109 15-142 3-112 (262)
93 cd08215 STKc_Nek Catalytic dom 97.9 0.00028 6.2E-09 52.8 11.7 108 17-142 2-114 (258)
94 cd05148 PTKc_Srm_Brk Catalytic 97.9 8E-05 1.7E-09 56.5 8.7 108 15-142 6-115 (261)
95 cd06646 STKc_MAP4K5 Catalytic 97.9 8.4E-05 1.8E-09 56.7 8.8 107 16-142 10-117 (267)
96 cd05570 STKc_PKC Catalytic dom 97.9 0.00011 2.3E-09 58.3 9.6 100 36-142 7-107 (318)
97 cd05622 STKc_ROCK1 Catalytic d 97.9 8.4E-05 1.8E-09 60.5 9.2 111 14-142 42-153 (371)
98 cd05591 STKc_nPKC_epsilon Cata 97.9 0.00011 2.3E-09 58.3 9.6 100 36-142 7-107 (321)
99 cd05632 STKc_GRK5 Catalytic do 97.9 0.00019 4.1E-09 55.8 10.8 99 37-142 13-113 (285)
100 cd07860 STKc_CDK2_3 Catalytic 97.9 7.9E-05 1.7E-09 57.3 8.6 99 36-142 12-111 (284)
101 cd06605 PKc_MAPKK Catalytic do 97.9 9.4E-05 2E-09 56.2 8.9 109 16-142 2-111 (265)
102 cd07838 STKc_CDK4_6_like Catal 97.9 0.0002 4.3E-09 54.9 10.7 100 36-142 11-118 (287)
103 KOG0616|consensus 97.9 5E-05 1.1E-09 61.0 7.3 110 16-142 45-155 (355)
104 cd07835 STKc_CDK1_like Catalyt 97.9 6.7E-05 1.5E-09 57.7 8.0 98 37-142 12-110 (283)
105 PTZ00024 cyclin-dependent prot 97.9 0.00011 2.4E-09 58.3 9.4 103 37-142 22-130 (335)
106 cd07859 STKc_TDY_MAPK_plant Ca 97.9 0.00016 3.4E-09 57.1 10.2 108 17-142 2-114 (338)
107 cd07840 STKc_CDK9_like Catalyt 97.9 0.0001 2.2E-09 56.4 8.9 98 37-142 12-111 (287)
108 cd05610 STKc_MASTL Catalytic d 97.9 0.00013 2.9E-09 64.1 10.7 110 16-142 5-115 (669)
109 PTZ00426 cAMP-dependent protei 97.9 0.00015 3.2E-09 58.4 10.2 111 16-142 31-142 (340)
110 KOG0605|consensus 97.9 0.0001 2.3E-09 62.8 9.5 99 16-131 142-241 (550)
111 cd07853 STKc_NLK Catalytic dom 97.9 9.9E-05 2.2E-09 59.7 9.2 109 16-142 1-114 (372)
112 cd08221 STKc_Nek9 Catalytic do 97.9 0.00043 9.3E-09 52.3 12.2 108 17-142 2-112 (256)
113 smart00219 TyrKc Tyrosine kina 97.9 0.00029 6.2E-09 53.0 11.2 99 36-142 11-114 (258)
114 cd05034 PTKc_Src_like Catalyti 97.9 0.00022 4.7E-09 54.1 10.6 110 12-142 3-114 (261)
115 cd05608 STKc_GRK1 Catalytic do 97.9 0.00012 2.6E-09 56.7 9.3 100 36-142 5-108 (280)
116 cd06622 PKc_MAPKK_PBS2_like Ca 97.9 9E-05 2E-09 57.2 8.5 109 16-142 2-113 (286)
117 PHA03207 serine/threonine kina 97.9 0.00014 3E-09 59.5 10.0 108 10-142 87-196 (392)
118 cd07843 STKc_CDC2L1 Catalytic 97.9 0.00015 3.2E-09 56.3 9.6 110 16-142 6-117 (293)
119 cd06637 STKc_TNIK Catalytic do 97.9 0.00018 4E-09 54.9 10.0 108 16-142 7-122 (272)
120 cd06609 STKc_MST3_like Catalyt 97.9 0.00017 3.8E-09 55.2 9.9 107 16-142 2-109 (274)
121 cd06628 STKc_MAPKKK_Byr2_like 97.9 0.00014 3E-09 55.4 9.2 104 36-142 12-117 (267)
122 cd05100 PTKc_FGFR3 Catalytic d 97.9 0.00025 5.4E-09 56.4 10.9 119 8-142 5-145 (334)
123 cd05079 PTKc_Jak1_rpt2 Catalyt 97.9 0.00028 6E-09 54.6 10.9 108 17-142 6-120 (284)
124 cd05089 PTKc_Tie1 Catalytic do 97.8 0.00027 5.8E-09 55.2 10.8 111 16-142 3-130 (297)
125 cd07842 STKc_CDK8_like Catalyt 97.8 0.00028 6.1E-09 55.0 10.9 110 17-142 2-119 (316)
126 cd05122 PKc_STE Catalytic doma 97.8 0.00022 4.8E-09 53.0 9.9 96 37-142 13-109 (253)
127 cd05098 PTKc_FGFR1 Catalytic d 97.8 0.00041 8.9E-09 54.3 11.9 117 10-142 13-151 (307)
128 cd05590 STKc_nPKC_eta Catalyti 97.8 0.00015 3.2E-09 57.6 9.4 100 36-142 7-107 (320)
129 PTZ00266 NIMA-related protein 97.8 0.0003 6.4E-09 64.6 12.3 119 6-142 4-129 (1021)
130 KOG1989|consensus 97.8 0.00013 2.9E-09 64.6 9.8 110 14-141 36-154 (738)
131 cd05614 STKc_MSK2_N N-terminal 97.8 0.00019 4.2E-09 56.9 10.1 111 17-142 2-116 (332)
132 cd06917 STKc_NAK1_like Catalyt 97.8 0.00028 6E-09 54.1 10.6 97 36-142 13-112 (277)
133 cd07861 STKc_CDK1_euk Catalyti 97.8 0.00025 5.4E-09 54.5 10.3 109 17-142 2-112 (285)
134 cd06644 STKc_STK10_LOK Catalyt 97.8 9.6E-05 2.1E-09 57.4 7.8 108 16-142 13-121 (292)
135 cd05602 STKc_SGK1 Catalytic do 97.8 0.0002 4.4E-09 56.8 9.7 100 36-142 7-107 (325)
136 cd07880 STKc_p38gamma_MAPK12 C 97.8 0.00026 5.7E-09 56.7 10.3 112 12-142 12-129 (343)
137 cd06656 STKc_PAK3 Catalytic do 97.8 0.00037 8.1E-09 54.5 10.9 116 6-142 10-126 (297)
138 cd08225 STKc_Nek5 Catalytic do 97.8 0.0002 4.3E-09 54.0 9.0 109 17-142 2-112 (257)
139 cd06623 PKc_MAPKK_plant_like C 97.8 0.00061 1.3E-08 51.5 11.6 108 16-142 2-110 (264)
140 cd00192 PTKc Catalytic domain 97.8 0.00032 7E-09 52.6 10.0 98 36-142 7-116 (262)
141 PTZ00284 protein kinase; Provi 97.8 0.00018 4E-09 60.2 9.4 109 14-142 128-242 (467)
142 cd07857 STKc_MPK1 Catalytic do 97.8 0.00034 7.5E-09 55.5 10.4 109 17-142 2-116 (332)
143 cd05072 PTKc_Lyn Catalytic dom 97.8 0.00044 9.4E-09 52.5 10.5 106 16-142 7-114 (261)
144 cd05099 PTKc_FGFR4 Catalytic d 97.8 0.0007 1.5E-08 53.3 11.9 112 15-142 12-145 (314)
145 cd07829 STKc_CDK_like Catalyti 97.8 0.00014 3E-09 55.6 7.7 99 36-142 11-109 (282)
146 cd07866 STKc_BUR1 Catalytic do 97.8 0.00019 4.1E-09 55.8 8.5 111 15-142 8-126 (311)
147 cd06606 STKc_MAPKKK Catalytic 97.7 0.00083 1.8E-08 50.1 11.5 98 36-142 12-112 (260)
148 cd05095 PTKc_DDR2 Catalytic do 97.7 0.0006 1.3E-08 53.1 11.1 112 14-142 4-141 (296)
149 cd05621 STKc_ROCK2 Catalytic d 97.7 0.00031 6.7E-09 57.2 9.8 110 15-142 43-153 (370)
150 cd06625 STKc_MEKK3_like Cataly 97.7 0.00053 1.1E-08 52.0 10.5 101 36-142 14-115 (263)
151 cd06633 STKc_TAO3 Catalytic do 97.7 0.00073 1.6E-08 53.3 11.5 99 36-142 33-132 (313)
152 cd06635 STKc_TAO1 Catalytic do 97.7 0.00065 1.4E-08 53.6 11.3 110 16-142 26-136 (317)
153 cd05611 STKc_Rim15_like Cataly 97.7 0.00035 7.6E-09 53.0 9.3 100 36-142 8-108 (260)
154 KOG0581|consensus 97.7 0.00039 8.4E-09 56.9 9.9 109 15-142 79-189 (364)
155 cd05609 STKc_MAST Catalytic do 97.7 0.00054 1.2E-08 53.6 10.6 110 16-142 2-112 (305)
156 cd08228 STKc_Nek6 Catalytic do 97.7 0.00043 9.2E-09 52.7 9.7 111 16-142 3-117 (267)
157 cd05618 STKc_aPKC_iota Catalyt 97.7 0.00029 6.2E-09 56.2 9.1 100 36-142 7-107 (329)
158 cd05051 PTKc_DDR Catalytic dom 97.7 0.00094 2E-08 51.6 11.8 111 15-142 5-141 (296)
159 cd05114 PTKc_Tec_Rlk Catalytic 97.7 0.00059 1.3E-08 51.7 10.5 106 16-142 5-111 (256)
160 cd05052 PTKc_Abl Catalytic dom 97.7 0.00054 1.2E-08 52.3 10.3 108 15-142 6-115 (263)
161 cd08530 STKc_CNK2-like Catalyt 97.7 0.0004 8.7E-09 52.2 9.4 99 36-142 12-114 (256)
162 cd05055 PTKc_PDGFR Catalytic d 97.7 0.0007 1.5E-08 53.1 11.1 115 12-142 32-152 (302)
163 cd05106 PTKc_CSF-1R Catalytic 97.7 0.00045 9.7E-09 56.3 10.3 92 14-121 37-133 (374)
164 cd05586 STKc_Sck1_like Catalyt 97.7 0.00032 7E-09 55.7 9.2 100 36-142 5-107 (330)
165 cd06653 STKc_MEKK3_like_1 Cata 97.7 0.00064 1.4E-08 51.9 10.5 111 17-142 4-117 (264)
166 cd05036 PTKc_ALK_LTK Catalytic 97.7 0.00069 1.5E-08 52.1 10.8 110 15-142 6-127 (277)
167 KOG0595|consensus 97.7 0.00055 1.2E-08 56.8 10.5 110 13-140 8-118 (429)
168 cd06652 STKc_MEKK2 Catalytic d 97.7 0.00059 1.3E-08 52.0 10.2 112 16-142 3-117 (265)
169 cd06610 STKc_OSR1_SPAK Catalyt 97.7 0.0012 2.6E-08 50.0 11.8 109 16-142 2-113 (267)
170 cd05604 STKc_SGK3 Catalytic do 97.7 0.00041 9E-09 55.0 9.5 100 36-142 7-107 (325)
171 cd06612 STKc_MST1_2 Catalytic 97.7 0.00052 1.1E-08 51.7 9.6 106 16-142 4-110 (256)
172 cd05032 PTKc_InsR_like Catalyt 97.7 0.0008 1.7E-08 51.4 10.8 111 14-142 5-130 (277)
173 cd08229 STKc_Nek7 Catalytic do 97.7 0.00026 5.6E-09 53.9 8.0 111 16-142 3-117 (267)
174 cd05585 STKc_YPK1_like Catalyt 97.7 0.00038 8.2E-09 54.9 9.1 99 36-142 5-104 (312)
175 cd05595 STKc_PKB_beta Catalyti 97.7 0.00038 8.3E-09 55.3 9.2 99 36-142 7-106 (323)
176 cd06643 STKc_SLK Catalytic dom 97.7 0.00063 1.4E-08 52.4 10.2 107 17-142 7-114 (282)
177 PTZ00036 glycogen synthase kin 97.7 0.00055 1.2E-08 57.2 10.5 105 15-142 66-181 (440)
178 cd05047 PTKc_Tie Catalytic dom 97.7 0.00076 1.6E-08 51.7 10.5 100 36-142 7-123 (270)
179 cd08224 STKc_Nek6_Nek7 Catalyt 97.7 0.00073 1.6E-08 51.2 10.3 111 16-142 3-117 (267)
180 cd05102 PTKc_VEGFR3 Catalytic 97.7 0.00049 1.1E-08 54.6 9.7 93 15-123 7-105 (338)
181 cd05113 PTKc_Btk_Bmx Catalytic 97.7 0.00092 2E-08 50.9 10.8 106 16-142 5-111 (256)
182 cd05571 STKc_PKB Catalytic dom 97.7 0.00041 9E-09 55.0 9.2 99 36-142 7-106 (323)
183 cd07833 STKc_CDKL Catalytic do 97.7 0.00036 7.9E-09 53.6 8.6 110 16-142 2-111 (288)
184 cd05041 PTKc_Fes_like Catalyti 97.6 0.0008 1.7E-08 50.7 10.3 96 36-141 7-103 (251)
185 cd06619 PKc_MKK5 Catalytic dom 97.6 0.00072 1.6E-08 52.2 10.2 105 16-142 2-106 (279)
186 cd06654 STKc_PAK1 Catalytic do 97.6 0.00073 1.6E-08 52.8 10.3 109 13-142 18-127 (296)
187 cd07856 STKc_Sty1_Hog1 Catalyt 97.6 0.00091 2E-08 53.3 11.0 112 12-142 7-119 (328)
188 cd06607 STKc_TAO Catalytic dom 97.6 0.00099 2.1E-08 52.2 11.0 110 16-142 16-126 (307)
189 cd05589 STKc_PKN Catalytic dom 97.6 0.00061 1.3E-08 54.0 9.9 109 17-142 1-112 (324)
190 cd05057 PTKc_EGFR_like Catalyt 97.6 0.0014 3.1E-08 50.3 11.7 110 15-142 7-120 (279)
191 cd08226 PK_STRAD_beta Pseudoki 97.6 0.00082 1.8E-08 53.3 10.6 100 35-142 11-112 (328)
192 cd07847 STKc_CDKL1_4 Catalytic 97.6 0.00066 1.4E-08 52.0 9.8 110 16-142 2-111 (286)
193 cd05593 STKc_PKB_gamma Catalyt 97.6 0.00048 1E-08 54.9 9.2 99 36-142 7-106 (328)
194 cd08528 STKc_Nek10 Catalytic d 97.6 0.00074 1.6E-08 51.5 9.9 117 17-142 2-124 (269)
195 cd06629 STKc_MAPKKK_Bck1_like 97.6 0.00053 1.1E-08 52.4 8.8 104 36-142 13-119 (272)
196 cd08217 STKc_Nek2 Catalytic do 97.6 0.0019 4.1E-08 48.6 11.8 108 17-142 2-116 (265)
197 cd05038 PTKc_Jak_rpt2 Catalyti 97.6 0.001 2.2E-08 50.9 10.3 109 16-142 5-120 (284)
198 cd06608 STKc_myosinIII_like Ca 97.6 0.0014 2.9E-08 49.7 10.9 110 14-142 5-124 (275)
199 cd05096 PTKc_DDR1 Catalytic do 97.6 0.0013 2.7E-08 51.4 11.0 112 14-142 4-149 (304)
200 cd07846 STKc_CDKL2_3 Catalytic 97.6 0.00041 8.9E-09 53.3 8.1 110 16-142 2-111 (286)
201 cd05577 STKc_GRK Catalytic dom 97.6 0.00093 2E-08 51.4 10.1 100 36-142 5-106 (277)
202 cd08223 STKc_Nek4 Catalytic do 97.6 0.0018 3.9E-08 48.8 11.4 109 17-142 2-113 (257)
203 cd05594 STKc_PKB_alpha Catalyt 97.6 0.00066 1.4E-08 53.8 9.2 99 36-142 7-106 (325)
204 cd07830 STKc_MAK_like Catalyti 97.6 0.00034 7.5E-09 53.7 7.4 98 37-142 12-110 (283)
205 cd05112 PTKc_Itk Catalytic dom 97.6 0.0018 3.9E-08 48.9 11.1 105 16-141 5-110 (256)
206 cd06627 STKc_Cdc7_like Catalyt 97.6 0.0026 5.6E-08 47.6 11.9 98 36-142 12-110 (254)
207 cd07851 STKc_p38 Catalytic dom 97.6 0.00042 9.1E-09 55.4 8.0 114 10-142 10-129 (343)
208 cd05053 PTKc_FGFR Catalytic do 97.6 0.0018 3.9E-08 50.0 11.3 114 13-142 10-143 (293)
209 cd06614 STKc_PAK Catalytic dom 97.5 0.0014 3E-08 50.6 10.6 106 17-142 21-127 (286)
210 cd06631 STKc_YSK4 Catalytic do 97.5 0.0015 3.2E-08 49.7 10.6 100 36-142 12-113 (265)
211 KOG0596|consensus 97.5 0.00026 5.6E-09 61.0 6.8 93 15-124 361-453 (677)
212 cd05090 PTKc_Ror1 Catalytic do 97.5 0.0022 4.9E-08 49.3 11.6 109 16-142 6-135 (283)
213 cd05613 STKc_MSK1_N N-terminal 97.5 0.0013 2.8E-08 50.9 10.2 111 17-142 2-116 (290)
214 cd05097 PTKc_DDR_like Catalyti 97.5 0.0017 3.7E-08 50.4 11.0 111 15-142 5-140 (295)
215 PTZ00267 NIMA-related protein 97.5 0.0018 3.9E-08 54.6 11.9 108 17-142 69-180 (478)
216 cd05578 STKc_Yank1 Catalytic d 97.5 0.00061 1.3E-08 51.6 8.3 109 17-142 2-111 (258)
217 PRK13184 pknD serine/threonine 97.5 0.00082 1.8E-08 61.3 10.2 111 16-142 3-124 (932)
218 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 97.5 0.0029 6.3E-08 48.7 12.1 108 16-142 5-119 (284)
219 KOG0574|consensus 97.5 0.00015 3.3E-09 58.8 4.9 101 17-138 35-136 (502)
220 cd06641 STKc_MST3 Catalytic do 97.5 0.0017 3.6E-08 50.0 10.7 95 37-142 17-112 (277)
221 cd05579 STKc_MAST_like Catalyt 97.5 0.0004 8.7E-09 52.3 7.1 99 36-142 5-104 (265)
222 cd07864 STKc_CDK12 Catalytic d 97.5 0.00068 1.5E-08 52.6 8.5 111 15-142 7-127 (302)
223 cd05582 STKc_RSK_N N-terminal 97.5 0.0011 2.4E-08 52.3 9.8 98 36-142 8-109 (318)
224 cd05105 PTKc_PDGFR_alpha Catal 97.5 0.0015 3.2E-08 54.1 10.9 92 14-121 36-132 (400)
225 cd05071 PTKc_Src Catalytic dom 97.5 0.0021 4.5E-08 49.2 10.9 106 15-142 6-113 (262)
226 cd05603 STKc_SGK2 Catalytic do 97.5 0.0012 2.6E-08 52.1 9.9 100 36-142 7-107 (321)
227 cd05576 STKc_RPK118_like Catal 97.5 0.00065 1.4E-08 51.3 8.0 92 35-142 4-96 (237)
228 cd06647 STKc_PAK_I Catalytic d 97.5 0.00067 1.4E-08 53.0 8.1 111 11-142 15-126 (293)
229 cd05575 STKc_SGK Catalytic dom 97.5 0.0014 2.9E-08 52.0 9.9 100 36-142 7-107 (323)
230 cd05109 PTKc_HER2 Catalytic do 97.5 0.0038 8.3E-08 47.9 12.2 110 15-142 7-120 (279)
231 cd00180 PKc Catalytic domain o 97.5 0.0015 3.3E-08 46.5 9.3 98 36-142 5-103 (215)
232 cd07849 STKc_ERK1_2_like Catal 97.5 0.0011 2.3E-08 52.8 9.2 108 14-142 4-117 (336)
233 cd06634 STKc_TAO2 Catalytic do 97.5 0.0024 5.3E-08 50.1 11.1 99 36-142 27-126 (308)
234 cd06630 STKc_MEKK1 Catalytic d 97.5 0.0013 2.7E-08 50.0 9.2 101 36-142 12-114 (268)
235 cd05103 PTKc_VEGFR2 Catalytic 97.5 0.0015 3.2E-08 52.4 9.9 92 16-123 8-105 (343)
236 cd05048 PTKc_Ror Catalytic Dom 97.4 0.0028 6.1E-08 48.6 11.2 109 16-142 6-135 (283)
237 cd07876 STKc_JNK2 Catalytic do 97.4 0.0023 4.9E-08 51.5 10.8 110 13-142 19-134 (359)
238 cd07877 STKc_p38alpha_MAPK14 C 97.4 0.0013 2.8E-08 52.7 9.4 121 3-142 5-131 (345)
239 cd06621 PKc_MAPKK_Pek1_like Ca 97.4 0.0038 8.2E-08 48.3 11.8 109 16-142 2-116 (287)
240 cd05067 PTKc_Lck_Blk Catalytic 97.4 0.0036 7.8E-08 47.5 11.4 107 14-142 5-113 (260)
241 cd06651 STKc_MEKK3 Catalytic d 97.4 0.0037 8.1E-08 47.7 11.5 100 36-142 14-117 (266)
242 cd05583 STKc_MSK_N N-terminal 97.4 0.0014 3E-08 50.6 9.2 111 17-142 2-116 (288)
243 cd05085 PTKc_Fer Catalytic dom 97.4 0.0034 7.3E-08 47.2 11.1 97 36-142 7-104 (250)
244 cd06632 STKc_MEKK1_plant Catal 97.4 0.0014 3.1E-08 49.2 9.0 98 36-142 12-113 (258)
245 cd05061 PTKc_InsR Catalytic do 97.4 0.0038 8.3E-08 48.3 11.5 110 15-141 6-129 (288)
246 KOG0661|consensus 97.4 9.2E-05 2E-09 62.6 2.5 110 15-142 10-121 (538)
247 cd06642 STKc_STK25-YSK1 Cataly 97.4 0.00053 1.1E-08 52.7 6.5 107 16-142 5-112 (277)
248 KOG0598|consensus 97.4 0.00087 1.9E-08 54.8 7.9 105 16-139 26-133 (357)
249 cd05108 PTKc_EGFR Catalytic do 97.4 0.0037 8.1E-08 49.2 11.4 110 16-142 8-120 (316)
250 cd07855 STKc_ERK5 Catalytic do 97.4 0.00074 1.6E-08 53.7 7.3 110 15-142 5-118 (334)
251 cd05083 PTKc_Chk Catalytic dom 97.4 0.005 1.1E-07 46.5 11.6 103 16-142 7-111 (254)
252 cd07878 STKc_p38beta_MAPK11 Ca 97.4 0.00091 2E-08 53.3 7.8 109 15-142 15-129 (343)
253 cd05101 PTKc_FGFR2 Catalytic d 97.4 0.0032 7E-08 49.1 10.8 114 13-142 13-148 (304)
254 cd05076 PTK_Tyk2_rpt1 Pseudoki 97.4 0.0034 7.4E-08 48.5 10.8 64 78-142 64-128 (274)
255 cd05050 PTKc_Musk Catalytic do 97.4 0.0038 8.3E-08 48.2 11.0 110 15-142 5-141 (288)
256 cd07852 STKc_MAPK15 Catalytic 97.4 0.0015 3.1E-08 52.0 8.7 112 13-142 5-118 (337)
257 cd07854 STKc_MAPK4_6 Catalytic 97.3 0.00085 1.8E-08 53.7 7.3 108 14-142 4-125 (342)
258 cd05070 PTKc_Fyn_Yrk Catalytic 97.3 0.0029 6.3E-08 48.0 10.0 105 16-142 7-113 (260)
259 cd07858 STKc_TEY_MAPK_plant Ca 97.3 0.002 4.3E-08 51.3 9.3 112 13-142 3-119 (337)
260 cd05118 STKc_CMGC Catalytic do 97.3 0.0021 4.5E-08 49.1 8.9 98 37-142 12-109 (283)
261 smart00220 S_TKc Serine/Threon 97.3 0.00096 2.1E-08 49.1 6.7 96 36-141 1-97 (244)
262 cd05054 PTKc_VEGFR Catalytic d 97.3 0.0037 7.9E-08 50.1 10.5 91 16-123 8-105 (337)
263 cd05045 PTKc_RET Catalytic dom 97.3 0.0059 1.3E-07 47.3 11.4 98 37-142 13-138 (290)
264 cd05073 PTKc_Hck Catalytic dom 97.3 0.0056 1.2E-07 46.5 11.0 108 13-142 4-113 (260)
265 cd06655 STKc_PAK2 Catalytic do 97.3 0.0023 4.9E-08 50.1 8.8 107 14-142 18-126 (296)
266 cd05104 PTKc_Kit Catalytic dom 97.3 0.003 6.6E-08 51.4 9.8 90 16-122 36-131 (375)
267 cd05606 STKc_beta_ARK Catalyti 97.2 0.0032 7E-08 48.6 9.4 100 36-142 6-108 (278)
268 cd05043 PTK_Ryk Pseudokinase d 97.2 0.0091 2E-07 45.8 11.7 111 15-142 6-128 (280)
269 KOG0575|consensus 97.2 0.0029 6.3E-08 54.8 9.6 109 17-142 20-129 (592)
270 cd05572 STKc_cGK_PKG Catalytic 97.2 0.005 1.1E-07 46.7 10.2 99 36-142 5-104 (262)
271 cd05115 PTKc_Zap-70 Catalytic 97.2 0.0057 1.2E-07 46.6 10.4 98 36-142 7-106 (257)
272 cd05584 STKc_p70S6K Catalytic 97.2 0.0043 9.3E-08 49.2 9.7 100 36-142 8-111 (323)
273 cd05094 PTKc_TrkC Catalytic do 97.2 0.0081 1.8E-07 46.5 11.0 109 16-142 6-134 (291)
274 cd05123 STKc_AGC Catalytic dom 97.2 0.0012 2.7E-08 49.5 6.2 99 36-142 5-104 (250)
275 cd07879 STKc_p38delta_MAPK13 C 97.2 0.0027 5.7E-08 50.8 8.3 111 12-142 12-128 (342)
276 KOG0671|consensus 97.2 0.00074 1.6E-08 55.8 5.0 115 9-142 83-203 (415)
277 KOG0615|consensus 97.1 0.002 4.4E-08 53.8 7.6 116 13-142 170-287 (475)
278 cd05092 PTKc_TrkA Catalytic do 97.1 0.01 2.2E-07 45.7 11.3 108 16-142 6-133 (280)
279 cd05107 PTKc_PDGFR_beta Cataly 97.1 0.0064 1.4E-07 50.4 10.7 92 15-123 37-134 (401)
280 KOG0198|consensus 97.1 0.0026 5.7E-08 51.5 8.1 98 35-142 28-128 (313)
281 cd05093 PTKc_TrkB Catalytic do 97.1 0.012 2.6E-07 45.5 11.6 109 16-142 6-131 (288)
282 cd05046 PTK_CCK4 Pseudokinase 97.1 0.011 2.4E-07 45.1 11.2 108 17-142 7-128 (275)
283 cd05111 PTK_HER3 Pseudokinase 97.1 0.011 2.4E-07 45.6 11.3 110 15-142 7-120 (279)
284 cd06658 STKc_PAK5 Catalytic do 97.1 0.0022 4.7E-08 50.1 7.3 94 37-142 35-129 (292)
285 cd05069 PTKc_Yes Catalytic dom 97.1 0.009 2E-07 45.4 10.5 104 17-142 8-113 (260)
286 cd06657 STKc_PAK4 Catalytic do 97.1 0.0048 1E-07 48.2 9.2 95 36-142 32-127 (292)
287 PLN00034 mitogen-activated pro 97.1 0.0046 1E-07 49.6 9.3 105 15-142 74-179 (353)
288 cd07850 STKc_JNK Catalytic dom 97.1 0.009 1.9E-07 47.9 10.9 110 13-142 14-129 (353)
289 cd05049 PTKc_Trk Catalytic dom 97.1 0.0064 1.4E-07 46.5 9.7 110 15-142 5-133 (280)
290 cd05633 STKc_GRK3 Catalytic do 97.1 0.0088 1.9E-07 46.3 10.5 100 36-142 6-108 (279)
291 cd06626 STKc_MEKK4 Catalytic d 97.1 0.012 2.6E-07 44.4 11.0 108 17-142 2-110 (264)
292 KOG0032|consensus 97.1 0.0084 1.8E-07 49.8 10.8 111 13-142 33-146 (382)
293 cd05044 PTKc_c-ros Catalytic d 97.1 0.0032 6.9E-08 47.9 7.8 99 36-142 7-117 (269)
294 KOG0694|consensus 97.1 0.0014 3E-08 57.5 6.3 108 16-140 369-477 (694)
295 cd05056 PTKc_FAK Catalytic dom 97.1 0.012 2.7E-07 44.8 11.1 109 16-142 7-118 (270)
296 cd05147 RIO1_euk RIO kinase fa 97.1 0.0032 7E-08 46.9 7.6 100 36-142 9-128 (190)
297 cd05062 PTKc_IGF-1R Catalytic 97.1 0.013 2.7E-07 45.0 11.2 111 15-142 6-130 (277)
298 cd07834 STKc_MAPK Catalytic do 97.1 0.003 6.6E-08 49.8 7.9 108 17-142 2-114 (330)
299 cd07874 STKc_JNK3 Catalytic do 97.1 0.0081 1.8E-07 48.1 10.3 110 13-142 15-130 (355)
300 KOG1290|consensus 97.1 0.0053 1.2E-07 52.4 9.5 109 15-142 78-198 (590)
301 cd06659 STKc_PAK6 Catalytic do 97.1 0.0024 5.2E-08 50.0 7.0 95 36-142 33-128 (297)
302 cd07868 STKc_CDK8 Catalytic do 97.0 0.0061 1.3E-07 47.7 9.3 95 36-142 13-119 (317)
303 cd06624 STKc_ASK Catalytic dom 97.0 0.0095 2.1E-07 45.4 9.9 97 36-142 20-119 (268)
304 cd05082 PTKc_Csk Catalytic dom 97.0 0.0074 1.6E-07 45.7 9.2 104 16-142 7-113 (256)
305 cd05037 PTK_Jak_rpt1 Pseudokin 97.0 0.0055 1.2E-07 46.1 8.4 96 36-142 7-112 (259)
306 cd07875 STKc_JNK1 Catalytic do 97.0 0.01 2.2E-07 47.7 10.5 109 14-142 23-137 (364)
307 cd06648 STKc_PAK_II Catalytic 97.0 0.013 2.8E-07 45.4 10.6 95 36-142 31-126 (285)
308 cd05145 RIO1_like RIO kinase f 97.0 0.0067 1.5E-07 44.9 8.5 100 36-142 9-128 (190)
309 cd05040 PTKc_Ack_like Catalyti 97.0 0.014 2.9E-07 44.1 10.2 98 36-142 7-108 (257)
310 KOG0591|consensus 96.9 0.00024 5.3E-09 57.0 0.3 110 16-142 20-135 (375)
311 cd05039 PTKc_Csk_like Catalyti 96.9 0.017 3.8E-07 43.5 10.5 105 16-142 7-113 (256)
312 cd05042 PTKc_Aatyk Catalytic d 96.9 0.019 4.1E-07 43.7 10.7 65 77-142 42-111 (269)
313 cd05116 PTKc_Syk Catalytic dom 96.9 0.023 5E-07 43.0 10.9 96 37-142 8-106 (257)
314 smart00221 STYKc Protein kinas 96.9 0.011 2.4E-07 43.1 8.9 96 37-141 12-108 (225)
315 cd07867 STKc_CDC2L6 Catalytic 96.8 0.012 2.5E-07 46.0 9.2 95 36-142 13-119 (317)
316 cd08222 STKc_Nek11 Catalytic d 96.8 0.0032 7E-08 47.7 5.8 111 17-142 2-117 (260)
317 PLN00113 leucine-rich repeat r 96.8 0.0078 1.7E-07 54.6 9.1 88 36-141 702-790 (968)
318 cd05078 PTK_Jak2_Jak3_rpt1 Pse 96.8 0.0038 8.1E-08 47.5 6.1 98 36-142 7-111 (258)
319 cd05087 PTKc_Aatyk1_Aatyk3 Cat 96.8 0.02 4.3E-07 43.7 10.2 98 36-142 7-111 (269)
320 cd05110 PTKc_HER4 Catalytic do 96.8 0.027 5.8E-07 44.0 10.9 110 15-142 7-120 (303)
321 KOG0594|consensus 96.7 0.015 3.2E-07 47.3 9.2 100 36-142 23-131 (323)
322 cd05080 PTKc_Tyk2_rpt2 Catalyt 96.7 0.027 5.8E-07 43.3 10.1 106 17-142 6-118 (283)
323 PHA03210 serine/threonine kina 96.7 0.005 1.1E-07 52.3 6.3 118 15-142 148-278 (501)
324 PF07714 Pkinase_Tyr: Protein 96.6 0.036 7.9E-07 42.3 10.3 99 36-142 11-114 (259)
325 cd05077 PTK_Jak1_rpt1 Pseudoki 96.6 0.032 6.9E-07 42.7 9.9 65 77-142 51-116 (262)
326 KOG0600|consensus 96.5 0.011 2.4E-07 50.6 7.5 97 37-142 130-229 (560)
327 PRK09188 serine/threonine prot 96.5 0.015 3.2E-07 48.1 8.2 93 9-119 12-107 (365)
328 KOG0592|consensus 96.5 0.013 2.9E-07 50.5 7.6 99 36-142 85-185 (604)
329 KOG0587|consensus 96.5 0.033 7.1E-07 50.5 10.2 95 37-141 32-133 (953)
330 KOG0583|consensus 96.4 0.031 6.7E-07 46.1 9.5 118 11-142 13-131 (370)
331 KOG0597|consensus 96.4 0.01 2.2E-07 51.8 6.7 98 36-142 14-111 (808)
332 cd05060 PTKc_Syk_like Catalyti 96.4 0.089 1.9E-06 39.7 11.1 96 36-142 7-106 (257)
333 PTZ00283 serine/threonine prot 96.4 0.065 1.4E-06 45.6 11.3 113 12-142 29-154 (496)
334 smart00090 RIO RIO-like kinase 96.4 0.018 3.9E-07 44.5 7.2 101 36-142 40-159 (237)
335 cd08216 PK_STRAD Pseudokinase 96.3 0.043 9.4E-07 42.8 9.4 97 37-142 13-112 (314)
336 PRK10359 lipopolysaccharide co 96.1 0.031 6.8E-07 43.4 7.3 95 12-121 28-134 (232)
337 cd05086 PTKc_Aatyk2 Catalytic 96.0 0.082 1.8E-06 40.4 9.4 99 36-142 7-110 (268)
338 cd05035 PTKc_Axl_like Catalyti 95.8 0.25 5.4E-06 37.3 11.2 97 37-142 12-124 (273)
339 PHA02988 hypothetical protein; 95.7 0.13 2.8E-06 40.0 9.3 96 36-142 32-133 (283)
340 KOG0577|consensus 95.6 0.025 5.4E-07 49.8 5.5 86 36-128 38-123 (948)
341 KOG0194|consensus 95.6 0.14 2.9E-06 43.9 9.8 98 36-140 169-271 (474)
342 cd05075 PTKc_Axl Catalytic dom 95.6 0.22 4.7E-06 37.8 10.1 99 36-142 11-123 (272)
343 cd05091 PTKc_Ror2 Catalytic do 95.5 0.14 3E-06 39.2 8.8 98 37-142 18-135 (283)
344 KOG0197|consensus 95.4 0.092 2E-06 44.7 8.0 92 37-140 219-312 (468)
345 KOG0659|consensus 95.2 0.057 1.2E-06 43.2 5.9 99 36-142 14-112 (318)
346 cd05058 PTKc_Met_Ron Catalytic 95.2 0.4 8.7E-06 36.0 10.3 99 36-142 7-109 (262)
347 cd05120 APH_ChoK_like Aminogly 95.0 0.19 4.2E-06 33.9 7.4 69 37-118 11-81 (155)
348 cd05074 PTKc_Tyro3 Catalytic d 94.8 0.44 9.5E-06 36.1 9.7 98 37-142 12-124 (273)
349 PRK14879 serine/threonine prot 94.7 0.16 3.5E-06 37.5 7.0 83 36-124 8-93 (211)
350 KOG0662|consensus 94.7 0.12 2.5E-06 39.6 6.1 99 36-142 14-112 (292)
351 KOG4236|consensus 94.6 0.19 4.2E-06 44.0 7.8 99 36-142 576-675 (888)
352 KOG0192|consensus 94.6 0.3 6.6E-06 40.3 8.8 97 35-140 52-151 (362)
353 KOG0201|consensus 94.1 0.022 4.7E-07 48.0 1.2 80 36-124 25-105 (467)
354 KOG0612|consensus 93.8 0.02 4.3E-07 53.2 0.3 93 16-125 76-170 (1317)
355 KOG0193|consensus 93.3 0.42 9.1E-06 42.1 7.5 92 36-141 404-498 (678)
356 KOG1035|consensus 92.3 0.051 1.1E-06 50.9 0.7 89 9-115 473-561 (1351)
357 PRK10345 hypothetical protein; 92.2 1.8 3.9E-05 32.9 9.0 81 37-131 15-106 (210)
358 TIGR03724 arch_bud32 Kae1-asso 91.9 0.47 1E-05 34.6 5.4 79 36-123 6-90 (199)
359 PLN03225 Serine/threonine-prot 91.7 1.5 3.2E-05 38.2 9.0 33 15-57 132-168 (566)
360 PRK12274 serine/threonine prot 91.2 1.1 2.3E-05 34.7 6.8 74 36-120 14-88 (218)
361 KOG0585|consensus 90.7 0.95 2.1E-05 39.0 6.6 105 15-136 97-215 (576)
362 KOG0593|consensus 90.3 0.57 1.2E-05 38.4 4.7 109 17-142 4-112 (396)
363 cd05119 RIO RIO kinase family, 90.2 2.1 4.5E-05 30.8 7.4 74 36-115 9-99 (187)
364 PRK09605 bifunctional UGMP fam 89.9 2.4 5.1E-05 36.5 8.6 46 76-122 382-428 (535)
365 KOG1152|consensus 89.8 1.6 3.5E-05 38.6 7.4 103 35-139 572-678 (772)
366 KOG0666|consensus 89.8 0.33 7.1E-06 40.0 3.0 111 16-142 25-143 (438)
367 KOG1006|consensus 89.7 0.36 7.7E-06 39.0 3.1 80 35-123 75-155 (361)
368 KOG0670|consensus 88.7 1.2 2.6E-05 39.1 5.7 111 12-141 429-546 (752)
369 KOG0660|consensus 88.0 1.9 4.1E-05 35.6 6.3 100 35-142 33-136 (359)
370 KOG0596|consensus 87.9 0.68 1.5E-05 40.6 3.8 48 13-71 406-453 (677)
371 cd05150 APH Aminoglycoside 3'- 87.4 5.4 0.00012 30.1 8.3 69 38-120 13-82 (244)
372 KOG0586|consensus 86.8 4.2 9.1E-05 35.8 8.0 109 15-141 56-165 (596)
373 KOG0599|consensus 86.3 1.3 2.9E-05 36.0 4.4 95 44-142 37-134 (411)
374 KOG0658|consensus 85.9 1.2 2.7E-05 36.7 4.2 93 35-141 35-135 (364)
375 KOG0580|consensus 85.4 1.3 2.9E-05 35.0 4.0 108 16-140 23-133 (281)
376 KOG1187|consensus 85.2 6.9 0.00015 32.2 8.3 94 36-140 87-183 (361)
377 cd05151 ChoK Choline Kinase (C 84.4 4.4 9.5E-05 28.4 6.1 65 37-115 11-75 (170)
378 cd05144 RIO2_C RIO kinase fami 84.4 3.3 7.1E-05 30.4 5.6 80 36-121 27-122 (198)
379 KOG0669|consensus 84.4 0.3 6.5E-06 39.2 -0.0 93 37-141 30-134 (376)
380 KOG0579|consensus 84.2 0.5 1.1E-05 42.4 1.2 107 17-142 34-141 (1187)
381 KOG0589|consensus 83.8 7.8 0.00017 32.9 8.1 100 35-142 15-117 (426)
382 cd05066 PTKc_EphR_A Catalytic 83.6 2.4 5.3E-05 32.0 4.7 63 14-88 53-116 (267)
383 TIGR01982 UbiB 2-polyprenylphe 83.2 4.4 9.4E-05 34.2 6.5 31 91-123 220-251 (437)
384 KOG0983|consensus 82.8 1.6 3.5E-05 35.5 3.5 88 36-131 104-191 (391)
385 KOG1166|consensus 82.4 1.3 2.8E-05 41.2 3.2 94 36-141 710-804 (974)
386 KOG0608|consensus 82.0 1.1 2.4E-05 40.2 2.5 83 35-124 640-723 (1034)
387 cd07844 STKc_PCTAIRE_like Cata 81.6 3.7 8E-05 31.4 5.1 62 15-88 52-113 (291)
388 KOG0614|consensus 81.6 0.097 2.1E-06 45.4 -4.0 92 35-134 431-523 (732)
389 cd07832 STKc_CCRK Catalytic do 81.3 3.3 7.1E-05 31.4 4.7 61 15-87 48-108 (286)
390 cd07871 STKc_PCTAIRE3 Catalyti 80.2 4.3 9.3E-05 31.2 5.1 62 14-87 51-112 (288)
391 KOG4279|consensus 79.7 5.9 0.00013 36.3 6.1 97 36-142 587-686 (1226)
392 cd05629 STKc_NDR_like_fungal C 79.6 3 6.6E-05 33.6 4.2 62 13-87 48-110 (377)
393 cd05059 PTKc_Tec_like Catalyti 79.4 4.4 9.6E-05 30.3 4.8 61 15-87 48-109 (256)
394 PRK09550 mtnK methylthioribose 78.6 12 0.00026 31.5 7.5 90 37-137 39-137 (401)
395 KOG0582|consensus 78.5 40 0.00088 29.1 10.5 116 9-142 20-137 (516)
396 PF03881 Fructosamin_kin: Fruc 78.5 5.8 0.00013 31.7 5.4 63 40-116 33-97 (288)
397 KOG0667|consensus 78.2 1.5 3.3E-05 38.5 2.1 67 15-90 231-301 (586)
398 KOG0607|consensus 77.7 1.5 3.2E-05 36.4 1.8 91 37-139 91-184 (463)
399 KOG0587|consensus 77.6 3.2 6.8E-05 38.2 3.9 53 13-71 62-115 (953)
400 KOG0576|consensus 77.5 0.34 7.4E-06 43.2 -2.0 88 15-123 15-105 (829)
401 KOG0578|consensus 77.5 3.9 8.4E-05 35.6 4.3 94 37-142 286-380 (550)
402 KOG2345|consensus 76.9 5.9 0.00013 31.7 4.9 106 15-139 21-135 (302)
403 cd05064 PTKc_EphR_A10 Catalyti 76.8 6.2 0.00013 29.8 5.0 61 16-88 56-117 (266)
404 cd06618 PKc_MKK7 Catalytic dom 76.5 3 6.5E-05 32.1 3.2 53 26-87 71-123 (296)
405 cd06611 STKc_SLK_like Catalyti 75.2 6.8 0.00015 29.7 4.8 63 14-88 50-113 (280)
406 cd05580 STKc_PKA Catalytic dom 74.8 4.7 0.0001 30.9 3.9 62 13-87 48-110 (290)
407 cd07869 STKc_PFTAIRE1 Catalyti 74.6 8.6 0.00019 29.7 5.4 62 15-88 52-113 (303)
408 KOG0986|consensus 74.5 6 0.00013 34.2 4.6 98 37-141 198-297 (591)
409 cd05154 ACAD10_11_like Acyl-Co 74.2 9.6 0.00021 27.7 5.3 74 37-119 11-89 (223)
410 cd07841 STKc_CDK7 Catalytic do 73.4 5 0.00011 30.7 3.7 62 15-88 51-112 (298)
411 COG3001 Uncharacterized protei 73.1 7.3 0.00016 31.0 4.5 37 78-114 56-94 (286)
412 cd07872 STKc_PCTAIRE2 Catalyti 73.1 8.7 0.00019 29.8 5.1 61 15-87 53-113 (309)
413 cd05146 RIO3_euk RIO kinase fa 72.9 10 0.00022 28.7 5.2 35 78-116 74-109 (197)
414 cd05113 PTKc_Btk_Bmx Catalytic 72.8 8.6 0.00019 28.9 4.9 65 13-89 46-111 (256)
415 cd07873 STKc_PCTAIRE1 Catalyti 72.8 8.8 0.00019 29.6 5.0 61 15-87 53-113 (301)
416 cd00192 PTKc Catalytic domain 72.6 5.3 0.00012 29.5 3.6 65 12-88 42-115 (262)
417 KOG4257|consensus 72.4 20 0.00043 32.5 7.4 60 80-141 441-501 (974)
418 PRK04750 ubiB putative ubiquin 72.1 19 0.00041 31.4 7.3 80 36-120 131-251 (537)
419 cd05599 STKc_NDR_like Catalyti 71.8 5.2 0.00011 31.9 3.6 62 14-88 49-111 (364)
420 KOG0584|consensus 71.5 9.7 0.00021 33.8 5.3 101 33-142 46-154 (632)
421 cd05088 PTKc_Tie2 Catalytic do 71.4 5.7 0.00012 30.8 3.7 46 13-69 54-100 (303)
422 KOG1152|consensus 70.9 2.6 5.7E-05 37.4 1.7 47 13-69 613-659 (772)
423 COG2112 Predicted Ser/Thr prot 70.8 11 0.00024 28.7 4.8 69 37-122 35-104 (201)
424 KOG1026|consensus 70.6 26 0.00057 32.0 7.9 64 76-140 535-612 (774)
425 KOG1095|consensus 70.2 43 0.00093 31.7 9.4 96 36-140 704-811 (1025)
426 cd05084 PTKc_Fes Catalytic dom 70.0 11 0.00023 28.0 4.8 63 13-87 40-103 (252)
427 KOG0611|consensus 69.8 5 0.00011 34.4 3.1 113 13-142 51-164 (668)
428 cd07831 STKc_MOK Catalytic dom 69.1 12 0.00025 28.3 4.9 64 16-88 47-110 (282)
429 cd05079 PTKc_Jak1_rpt2 Catalyt 68.6 6 0.00013 30.2 3.2 67 12-88 52-119 (284)
430 cd00180 PKc Catalytic domain o 68.1 14 0.00031 25.6 4.9 64 12-87 37-101 (215)
431 cd05033 PTKc_EphR Catalytic do 67.8 13 0.00028 27.9 4.9 61 16-88 55-116 (266)
432 cd05600 STKc_Sid2p_Dbf2p Catal 66.8 15 0.00032 28.9 5.2 60 15-87 50-110 (333)
433 cd05076 PTK_Tyk2_rpt1 Pseudoki 66.7 19 0.00042 27.3 5.7 52 28-88 75-127 (274)
434 KOG0663|consensus 66.6 2.9 6.3E-05 34.7 1.1 91 50-141 150-272 (419)
435 cd06917 STKc_NAK1_like Catalyt 66.3 7.5 0.00016 29.3 3.3 63 13-86 46-109 (277)
436 cd05114 PTKc_Tec_Rlk Catalytic 65.9 14 0.0003 27.5 4.7 62 14-87 47-109 (256)
437 cd05597 STKc_DMPK_like Catalyt 65.8 27 0.00058 27.5 6.5 61 15-87 50-111 (331)
438 cd05626 STKc_LATS2 Catalytic d 65.5 9.4 0.0002 30.8 3.9 61 13-86 48-109 (381)
439 PHA03209 serine/threonine kina 65.4 9.2 0.0002 30.6 3.8 61 16-88 107-167 (357)
440 cd05065 PTKc_EphR_B Catalytic 64.7 12 0.00025 28.2 4.1 62 15-88 54-116 (269)
441 cd06606 STKc_MAPKKK Catalytic 64.0 8.3 0.00018 28.2 3.1 66 10-88 43-111 (260)
442 cd05581 STKc_PDK1 Catalytic do 63.9 5.3 0.00012 30.0 2.1 65 13-89 48-113 (280)
443 cd05598 STKc_LATS Catalytic do 63.7 12 0.00026 30.1 4.2 46 13-70 48-94 (376)
444 cd05615 STKc_cPKC_alpha Cataly 63.6 14 0.00031 29.0 4.5 60 16-87 50-110 (323)
445 cd07839 STKc_CDK5 Catalytic do 63.4 6.6 0.00014 29.8 2.5 63 14-88 47-109 (284)
446 TIGR01767 MTRK 5-methylthiorib 63.3 31 0.00066 28.8 6.5 58 78-138 47-107 (370)
447 cd07836 STKc_Pho85 Catalytic d 63.2 14 0.0003 27.9 4.3 63 14-88 46-110 (284)
448 cd05624 STKc_MRCK_beta Catalyt 63.1 32 0.0007 27.1 6.5 51 27-86 59-110 (331)
449 cd05574 STKc_phototropin_like 62.9 15 0.00033 28.4 4.5 63 13-87 48-112 (316)
450 cd05601 STKc_CRIK Catalytic do 62.7 23 0.00051 27.7 5.6 63 13-87 48-111 (330)
451 cd05592 STKc_nPKC_theta_delta 62.4 17 0.00036 28.5 4.7 53 26-88 53-106 (316)
452 KOG0615|consensus 62.3 3.1 6.7E-05 35.3 0.5 38 13-62 223-260 (475)
453 PHA03211 serine/threonine kina 62.1 16 0.00035 30.9 4.8 63 15-89 209-271 (461)
454 cd05122 PKc_STE Catalytic doma 61.8 14 0.0003 26.9 3.9 65 12-88 43-108 (253)
455 cd07833 STKc_CDKL Catalytic do 61.6 9 0.00019 29.0 3.0 63 13-87 47-109 (288)
456 cd06629 STKc_MAPKKK_Bck1_like 61.5 13 0.00028 28.0 3.8 62 13-87 55-117 (272)
457 KOG0595|consensus 61.5 17 0.00038 30.7 4.7 121 10-143 53-210 (429)
458 PLN02756 S-methyl-5-thioribose 61.3 67 0.0015 27.3 8.3 95 40-140 48-145 (418)
459 cd05034 PTKc_Src_like Catalyti 61.3 11 0.00024 28.0 3.4 64 13-88 48-113 (261)
460 PF12260 PIP49_C: Protein-kina 61.2 16 0.00034 27.2 4.1 60 79-142 8-70 (188)
461 KOG1151|consensus 61.0 11 0.00023 32.8 3.5 125 5-142 453-579 (775)
462 cd07838 STKc_CDK4_6_like Catal 60.8 15 0.00033 27.6 4.2 69 15-87 47-116 (287)
463 cd06613 STKc_MAP4K3_like Catal 60.8 14 0.00031 27.4 3.9 65 12-88 46-111 (262)
464 cd07829 STKc_CDK_like Catalyti 60.8 7.5 0.00016 29.3 2.4 62 15-88 47-108 (282)
465 cd05587 STKc_cPKC Catalytic do 60.6 20 0.00044 28.0 4.9 60 16-87 50-110 (324)
466 cd05573 STKc_ROCK_NDR_like Cat 59.7 13 0.00027 29.3 3.6 63 13-88 48-111 (350)
467 PRK10593 hypothetical protein; 59.6 40 0.00086 26.7 6.4 39 76-114 53-96 (297)
468 PTZ00426 cAMP-dependent protei 59.6 22 0.00047 28.4 5.0 60 15-87 80-140 (340)
469 cd06628 STKc_MAPKKK_Byr2_like 59.5 12 0.00027 27.9 3.4 62 13-87 53-115 (267)
470 PF01163 RIO1: RIO1 family; I 59.2 14 0.0003 27.6 3.6 35 76-114 54-89 (188)
471 cd06616 PKc_MKK4 Catalytic dom 58.8 21 0.00045 27.1 4.6 61 15-86 51-115 (288)
472 cd05068 PTKc_Frk_like Catalyti 58.2 17 0.00038 27.1 4.0 64 13-88 48-113 (261)
473 PLN03224 probable serine/threo 58.2 1.2E+02 0.0027 26.2 9.6 23 14-45 144-166 (507)
474 KOG0668|consensus 58.0 6 0.00013 31.5 1.4 102 16-142 39-143 (338)
475 cd06633 STKc_TAO3 Catalytic do 57.7 26 0.00056 27.3 5.0 61 15-87 70-130 (313)
476 cd05617 STKc_aPKC_zeta Catalyt 57.5 16 0.00035 28.7 3.9 61 15-87 44-105 (327)
477 cd05085 PTKc_Fer Catalytic dom 57.3 26 0.00057 25.8 4.8 60 15-86 41-101 (250)
478 cd05607 STKc_GRK7 Catalytic do 57.3 26 0.00056 26.7 4.9 61 15-87 42-104 (277)
479 cd05115 PTKc_Zap-70 Catalytic 57.2 26 0.00057 26.3 4.9 63 13-88 42-105 (257)
480 cd05628 STKc_NDR1 Catalytic do 57.1 17 0.00037 29.0 4.0 62 13-87 48-110 (363)
481 cd05588 STKc_aPKC Catalytic do 57.0 19 0.00041 28.4 4.2 63 14-88 43-106 (329)
482 cd07835 STKc_CDK1_like Catalyt 57.0 15 0.00032 27.8 3.5 62 15-88 47-109 (283)
483 PLN02876 acyl-CoA dehydrogenas 56.9 37 0.00081 31.0 6.5 71 37-115 51-128 (822)
484 cd08227 PK_STRAD_alpha Pseudok 56.9 16 0.00034 28.7 3.7 64 13-88 46-111 (327)
485 cd06650 PKc_MEK1 Catalytic dom 56.8 15 0.00033 29.0 3.6 46 13-70 50-96 (333)
486 KOG0984|consensus 56.7 44 0.00096 26.3 5.9 97 36-140 58-157 (282)
487 PTZ00024 cyclin-dependent prot 56.6 21 0.00045 28.0 4.4 61 15-88 69-129 (335)
488 cd06605 PKc_MAPKK Catalytic do 56.4 7.8 0.00017 28.9 1.8 64 13-88 46-110 (265)
489 cd07870 STKc_PFTAIRE2 Catalyti 56.4 28 0.00061 26.5 5.0 60 15-86 52-111 (291)
490 KOG0200|consensus 56.4 1.3E+02 0.0028 26.5 9.6 99 35-140 307-427 (609)
491 cd05619 STKc_nPKC_theta Cataly 56.4 27 0.00059 27.3 5.0 52 26-87 53-105 (316)
492 cd07843 STKc_CDC2L1 Catalytic 56.1 20 0.00043 27.4 4.1 64 15-88 53-116 (293)
493 KOG0600|consensus 56.1 13 0.00029 32.3 3.3 65 15-89 165-229 (560)
494 cd08221 STKc_Nek9 Catalytic do 55.9 29 0.00062 25.7 4.9 63 13-87 46-110 (256)
495 cd05047 PTKc_Tie Catalytic dom 54.8 17 0.00037 27.4 3.5 46 13-69 42-88 (270)
496 cd07862 STKc_CDK6 Catalytic do 54.7 39 0.00084 25.6 5.5 69 16-88 51-120 (290)
497 cd05570 STKc_PKC Catalytic dom 54.4 29 0.00062 27.1 4.8 62 15-88 44-106 (318)
498 cd07865 STKc_CDK9 Catalytic do 53.8 51 0.0011 25.0 6.1 70 15-88 60-129 (310)
499 cd05625 STKc_LATS1 Catalytic d 53.8 22 0.00047 28.6 4.1 45 13-69 48-93 (382)
500 KOG0603|consensus 53.6 27 0.00059 31.0 4.8 64 77-142 362-426 (612)
No 1
>KOG1163|consensus
Probab=99.85 E-value=2.9e-21 Score=149.61 Aligned_cols=111 Identities=36% Similarity=0.507 Sum_probs=101.1
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCc
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKG 92 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~ 92 (143)
.-+-+.++++++. -+||.+|.+....+++.. |+|+|. ...+...|..|.+++..++++.|
T Consensus 13 v~gky~lvrkiGs---------GSFGdIy~~~~i~~ge~V-AiK~Es----------~~a~hpqL~yEskvY~iL~~g~G 72 (341)
T KOG1163|consen 13 VGGKYKLVRKIGS---------GSFGDIYLGISITSGEEV-AIKLES----------SKAKHPQLLYESKVYRILQGGVG 72 (341)
T ss_pred eccceEEEEeecC---------CchhheeeeeeccCCceE-EEEeec----------ccCCCcchhHHHHHHHHhccCCC
Confidence 3456788888865 349999999999999999 999993 33467889999999999999999
Q ss_pred ccEEEEeeecCCeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhcC
Q psy16459 93 IPEVYYFGPCGKYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEGK 143 (143)
Q Consensus 93 ~P~l~~~G~~~~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~r 143 (143)
+|++.++|++..|+++|||||||||+||++.|.++||+.|++.+|.|||.|
T Consensus 73 iP~i~~y~~e~~ynvlVMdLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~R 123 (341)
T KOG1163|consen 73 IPHIRHYGTEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSR 123 (341)
T ss_pred CchhhhhccccccceeeeeccCccHHHHHHHHhhhhhHHhHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999976
No 2
>KOG1165|consensus
Probab=99.81 E-value=5e-20 Score=147.81 Aligned_cols=109 Identities=38% Similarity=0.575 Sum_probs=96.4
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCccc
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIP 94 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P 94 (143)
--|.|=++|+-+ +||..+...+.-+++.. |||.|+. -.....|..|.+.++.+.+++|+|
T Consensus 28 ~hyrVGkKIGeG---------sFG~lf~G~Nl~nne~V-AIKfEPr----------kS~APQLrdEYr~YKlL~g~~GIP 87 (449)
T KOG1165|consen 28 PHYRVGKKIGEG---------SFGVLFLGKNLYNNEPV-AIKFEPR----------KSEAPQLRDEYRTYKLLGGTEGIP 87 (449)
T ss_pred ccceeccccccC---------cceeeecccccccCceE-EEEeccc----------cCCcchHHHHHHHHHHHcCCCCCC
Confidence 345666666443 49999999999998877 9999963 234567999999999999999999
Q ss_pred EEEEeeecCCeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhcC
Q psy16459 95 EVYYFGPCGKYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEGK 143 (143)
Q Consensus 95 ~l~~~G~~~~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~r 143 (143)
+.+.+|.++.||.+|||||||||+||+..|+++||++||+.+|+|||+|
T Consensus 88 ~vYYFGqeG~~NiLVidLLGPSLEDLFD~CgR~FSvKTV~miA~Qmi~r 136 (449)
T KOG1165|consen 88 QVYYFGQEGKYNILVIDLLGPSLEDLFDLCGRRFSVKTVAMIAKQMITR 136 (449)
T ss_pred ceeeeccccchhhhhhhhhCcCHHHHHHHhcCcccHHhHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999986
No 3
>KOG1164|consensus
Probab=99.77 E-value=2.7e-18 Score=137.59 Aligned_cols=111 Identities=32% Similarity=0.357 Sum_probs=94.7
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhh---cCCc
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQ---SNKG 92 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~---~~~~ 92 (143)
.|.|.++++.++ ||.||.|.|..+.....|+|+|... ...+...++.|+.|+..+. ++.|
T Consensus 19 ~~~i~~~iG~G~---------fG~V~~v~~~~~~~~~~a~K~e~~~--------~~~~~~~l~~E~~vl~~l~~~~~~~~ 81 (322)
T KOG1164|consen 19 RYKLGKKIGEGG---------FGAVYLVSDKSEKNKEYAKKLEKKE--------LGSKPSVLKIEIQVLKKLEKKNGPSH 81 (322)
T ss_pred ceEEeeeccccC---------CceEEEEEecCCCCeeEEEEEEEec--------ccCCCccchhHHHHHHHHhhhcCCCC
Confidence 688999997766 9999999999887555699999531 1222337999999999998 5679
Q ss_pred ccEEEEee-ecCCeeEEeecccCcCHHHHHHhc-CCCCCHHHHHHHHHHHhcC
Q psy16459 93 IPEVYYFG-PCGKYNALVMELLGPSLEDLFDLC-NRKFTLKTVLMIAIQLEGK 143 (143)
Q Consensus 93 ~P~l~~~G-~~~~~~~iVM~LlG~sL~~l~~~~-~~~fs~~T~~~ia~q~l~r 143 (143)
||.+++.| ..+.|+||||+|+|+||++|++.. .++||+.|+++||+|+|++
T Consensus 82 ~~~~~~~G~~~~~~~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~ 134 (322)
T KOG1164|consen 82 FPKLLDHGRSTEDFNFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNA 134 (322)
T ss_pred CCEEEEeccCCCceeEEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHH
Confidence 99999999 588999999999999999999888 6999999999999999863
No 4
>KOG1165|consensus
Probab=99.42 E-value=5.2e-14 Score=113.43 Aligned_cols=85 Identities=42% Similarity=0.765 Sum_probs=74.3
Q ss_pred ccceeeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhh
Q psy16459 9 SMSLLKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQ 88 (143)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~ 88 (143)
....|+.|+-..|++ .|.+|+|.+|+||. .+.||+||||||||||+|++..|+++||++|++++++||+
T Consensus 66 ~APQLrdEYr~YKlL--~g~~GIP~vYYFGq---------eG~~NiLVidLLGPSLEDLFD~CgR~FSvKTV~miA~Qmi 134 (449)
T KOG1165|consen 66 EAPQLRDEYRTYKLL--GGTEGIPQVYYFGQ---------EGKYNILVIDLLGPSLEDLFDLCGRRFSVKTVAMIAKQMI 134 (449)
T ss_pred CcchHHHHHHHHHHH--cCCCCCCceeeecc---------ccchhhhhhhhhCcCHHHHHHHhcCcccHHhHHHHHHHHH
Confidence 344577888888888 79999999999999 9999999999999999999999999999999999999998
Q ss_pred cCC------------cccEEEEeeecCC
Q psy16459 89 SNK------------GIPEVYYFGPCGK 104 (143)
Q Consensus 89 ~~~------------~~P~l~~~G~~~~ 104 (143)
... --|.+|-+|+-+.
T Consensus 135 ~rie~vH~k~LIYRDIKPdNFLIGrp~~ 162 (449)
T KOG1165|consen 135 TRIEYVHEKDLIYRDIKPDNFLIGRPGT 162 (449)
T ss_pred HHHHHHHhcceeecccCccceeecCCCC
Confidence 751 1288888887653
No 5
>KOG1163|consensus
Probab=99.09 E-value=5.5e-11 Score=92.76 Aligned_cols=80 Identities=36% Similarity=0.678 Sum_probs=67.1
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcC--
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSN-- 90 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~-- 90 (143)
|--|-.|...+ ++..|||.+.+||. ++.|++|||+++||||++++..|+++|+++|.++++.||..+
T Consensus 57 L~yEskvY~iL--~~g~GiP~i~~y~~---------e~~ynvlVMdLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiE 125 (341)
T KOG1163|consen 57 LLYESKVYRIL--QGGVGIPHIRHYGT---------EKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIE 125 (341)
T ss_pred hhHHHHHHHHh--ccCCCCchhhhhcc---------ccccceeeeeccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHH
Confidence 33455555555 89999999999999 999999999999999999999999999999999999999875
Q ss_pred ----Ccc------cEEEEeeecC
Q psy16459 91 ----KGI------PEVYYFGPCG 103 (143)
Q Consensus 91 ----~~~------P~l~~~G~~~ 103 (143)
.+| |.++-.|...
T Consensus 126 yvH~r~fiHRDIKPdNFLMGlgr 148 (341)
T KOG1163|consen 126 YVHLRNFIHRDIKPDNFLMGLGR 148 (341)
T ss_pred HHHhhccccccCCccceeecccc
Confidence 222 7777766543
No 6
>KOG1164|consensus
Probab=98.68 E-value=1.8e-08 Score=80.73 Aligned_cols=84 Identities=38% Similarity=0.529 Sum_probs=68.9
Q ss_pred eeeeeeeeeeccCC-CCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhC-CCcchHHHHHHHHhhhc
Q psy16459 12 LLKCQFSLEGMEDD-PPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCG-FRFSLKTVLMIAQQLQS 89 (143)
Q Consensus 12 ~~~~~~~~~~~~~~-~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~-~~~sL~tE~~v~~ql~~ 89 (143)
.|+.|..|++.+.. .++.|||.+++.|. ..+.|++|||+++|+||.++++... ++|+..|.++++.|+..
T Consensus 62 ~l~~E~~vl~~l~~~~~~~~~~~~~~~G~--------~~~~~~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~ 133 (322)
T KOG1164|consen 62 VLKIEIQVLKKLEKKNGPSHFPKLLDHGR--------STEDFNFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLN 133 (322)
T ss_pred cchhHHHHHHHHhhhcCCCCCCEEEEecc--------CCCceeEEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHH
Confidence 68889999998843 36789999999995 1778999999999999999997765 89999999999999865
Q ss_pred C------Ccc------cEEEEeeecC
Q psy16459 90 N------KGI------PEVYYFGPCG 103 (143)
Q Consensus 90 ~------~~~------P~l~~~G~~~ 103 (143)
. .|| |.++..|..+
T Consensus 134 ~l~~lH~~G~iHRDiKp~N~~~g~~~ 159 (322)
T KOG1164|consen 134 ALEDLHSKGFIHRDIKPENFVVGQSS 159 (322)
T ss_pred HHHHHHhcCcccCCcCHHHeeecCCC
Confidence 3 132 7777777654
No 7
>KOG0667|consensus
Probab=98.40 E-value=1.3e-06 Score=75.10 Aligned_cols=113 Identities=18% Similarity=0.166 Sum_probs=91.8
Q ss_pred ceeeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhc-
Q psy16459 11 SLLKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQS- 89 (143)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~- 89 (143)
+-|.-+++|+..++. -.||+|.++.|..|++.. |||+=- +.... ..--..|++++..+..
T Consensus 182 d~i~~rY~V~e~LGk---------GtFGQVvk~~d~~T~e~V-AIKIiK---N~k~f------~~Q~~~Ei~iL~~ln~~ 242 (586)
T KOG0667|consen 182 DHIAYRYEVLEVLGK---------GSFGQVVKAYDHKTGEIV-AIKIIK---NKKRF------LRQAQIEIRILELLNKH 242 (586)
T ss_pred ceeEEEEEEEEEecc---------cccceeEEEEecCCCcEE-EEEeec---cChHH------HHHHHHHHHHHHHHhcc
Confidence 445668999999965 349999999999999988 998841 11111 1123568889888872
Q ss_pred ----CCcccEEEEeeecCCeeEEeecccCcCHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 90 ----NKGIPEVYYFGPCGKYNALVMELLGPSLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 90 ----~~~~P~l~~~G~~~~~~~iVM~LlG~sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
.-+|-+++++-....+.+||-|||+.||-++.+.. .+.||+..+-.++.|+|+
T Consensus 243 d~~~~~n~Vrm~d~F~fr~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~ 300 (586)
T KOG0667|consen 243 DPDDKYNIVRMLDYFYFRNHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILT 300 (586)
T ss_pred CCCCCeeEEEeeeccccccceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence 24889999999999999999999999999999988 788999999999999985
No 8
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=98.34 E-value=5.1e-06 Score=67.34 Aligned_cols=110 Identities=19% Similarity=0.196 Sum_probs=81.0
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
+|.+++.++.++ ||.||++.+..+++.+ |+|.-.. .+.... .....+..|+.++.++ ..+++++
T Consensus 2 ~y~~~~~lG~G~---------~g~Vy~~~~~~~~~~~-aiK~~~~----~~~~~~-~~~~~~~~E~~il~~l-~hp~iv~ 65 (377)
T cd05629 2 DFHTVKVIGKGA---------FGEVRLVQKKDTGKIY-AMKTLLK----SEMFKK-DQLAHVKAERDVLAES-DSPWVVS 65 (377)
T ss_pred CceEeEEEeecC---------CEEEEEEEECCCCCEE-EEEEEEH----HHHHHh-HHHHHHHHHHHHHHhC-CCCCcce
Confidence 466777776544 9999999999999887 8876421 111110 0112356788877664 5578999
Q ss_pred EEEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++....+.+.|+|||++ |.+|.++... .+.|+..++..++.|++.
T Consensus 66 ~~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~ql~~ 112 (377)
T cd05629 66 LYYSFQDAQYLYLIMEFLPGGDLMTMLIK-YDTFSEDVTRFYMAECVL 112 (377)
T ss_pred EEEEEEcCCeeEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHH
Confidence 999999999999999998 6789887654 477999999999888764
No 9
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=98.32 E-value=5.9e-06 Score=65.91 Aligned_cols=111 Identities=14% Similarity=0.111 Sum_probs=80.7
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
+|++++.++.++ ||.||.+.+..+++.| |+|.=. ..+..+ ......+..|..++..+ ..++++.
T Consensus 2 ~y~~~~~lG~G~---------~g~V~~~~~~~~~~~~-aiK~~~----~~~~~~-~~~~~~~~~e~~~l~~~-~~~~i~~ 65 (331)
T cd05597 2 DFEILKVIGRGA---------FGEVAVVKMKNTGQVY-AMKILN----KWEMLK-RAETACFREERDVLVNG-DRRWITN 65 (331)
T ss_pred CceEEEEEEecC---------CeEEEEEEECCCCCEE-EEEEEE----HHHHhh-hhhHHHHHHHHHHHHhC-CCCCCCc
Confidence 466777776544 9999999999998877 777621 011100 01112345666666554 5678999
Q ss_pred EEEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++....+.+.|+|||.+ |.+|.++.......++..++..++.|++.
T Consensus 66 ~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~ 113 (331)
T cd05597 66 LHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVL 113 (331)
T ss_pred eEEEEecCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 999999999999999987 78999887765678999999999988764
No 10
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=98.31 E-value=6.3e-06 Score=65.54 Aligned_cols=110 Identities=15% Similarity=0.036 Sum_probs=78.0
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEE
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEV 96 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l 96 (143)
|+.++.++.++ ||.||+|.+..++..| |+|+-.. .... ..........|..++..+...+.++.+
T Consensus 2 f~~~~~lg~G~---------~g~Vy~~~~~~~~~~v-aiK~~~~----~~~~-~~~~~~~~~~e~~~l~~~~~~~~i~~~ 66 (323)
T cd05615 2 FNFLMVLGKGS---------FGKVMLAERKGTDELY-AIKILKK----DVVI-QDDDVECTMVEKRVLALQDKPPFLTQL 66 (323)
T ss_pred ceEEEEEEecC---------CeEEEEEEECCCCCEE-EEEEEEH----HHhh-hhhHHHHHHHHHHHHHhccCCCchhhe
Confidence 44555564433 9999999999998887 8876421 0000 011112344566776666666788999
Q ss_pred EEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 97 YYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 97 ~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+.+...+.+.|+|||.+ |.+|.+..+. .+.++...+..++.|++.
T Consensus 67 ~~~~~~~~~~~lv~Ey~~~g~L~~~i~~-~~~l~~~~~~~i~~qi~~ 112 (323)
T cd05615 67 HSCFQTVDRLYFVMEYVNGGDLMYHIQQ-VGKFKEPQAVFYAAEISV 112 (323)
T ss_pred eeEEecCCEEEEEEcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHH
Confidence 99998889999999998 6788877654 367999999999999764
No 11
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=98.29 E-value=1.4e-05 Score=61.35 Aligned_cols=110 Identities=15% Similarity=0.043 Sum_probs=79.9
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
.|++++.++..+ ||.||+|.+..+++.+ |+|.-.....-.+ ......|..+..+....+++++
T Consensus 2 ~~~~~~~ig~g~---------~g~v~~~~~~~~~~~v-aiK~~~~~~~~~~-------~~~~~~e~~~~~~~~~~~~iv~ 64 (283)
T cd06617 2 DLEVIEELGRGA---------YGVVDKMRHVPTGTIM-AVKRIRATVNSQE-------QKRLLMDLDISMRSVDCPYTVT 64 (283)
T ss_pred CceEEEEecccC---------CeEEEEEEEcCCCcEE-EEEEEecCCCcHH-------HHHHHHHHHHHHHHcCCCCeee
Confidence 456666675544 9999999999998887 7775322111011 1123345666666677789999
Q ss_pred EEEeeecCCeeEEeecccCcCHHHHHHhc---CCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELLGPSLEDLFDLC---NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~LlG~sL~~l~~~~---~~~fs~~T~~~ia~q~l~ 142 (143)
++++...+...|+||+++..+|.++.... ...++..++..++.|++.
T Consensus 65 ~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~ 114 (283)
T cd06617 65 FYGALFREGDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVK 114 (283)
T ss_pred eeEEEecCCcEEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999998876543 457999999999998764
No 12
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=98.28 E-value=9.2e-06 Score=64.47 Aligned_cols=111 Identities=15% Similarity=0.015 Sum_probs=78.5
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
+|++++.++.++ ||.||++.+..+++.+ |+|.=.. + .. ...........|..++..+...+.++.
T Consensus 1 ~y~~~~~lg~G~---------~g~Vy~~~~~~~~~~~-avK~~~~--~--~~-~~~~~~~~~~~e~~~l~~~~~~~~i~~ 65 (324)
T cd05587 1 DFNFLMVLGKGS---------FGKVMLAERKGTDELY-AIKILKK--D--VI-IQDDDVECTMVEKRVLALPGKPPFLTQ 65 (324)
T ss_pred CceEEEEEeecc---------CeEEEEEEECCCCCEE-EEEEEEH--H--Hh-hhhhHHHHHHHHHHHHHhcCCCCceee
Confidence 356777776544 9999999999988877 7775321 0 00 000111234556777766665567889
Q ss_pred EEEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++.+...+.+.|+|||.+ |.+|.+.... .+.++...+..++.|+++
T Consensus 66 ~~~~~~~~~~~~lv~E~~~~g~L~~~~~~-~~~~~~~~~~~~~~qi~~ 112 (324)
T cd05587 66 LHSCFQTMDRLYFVMEYVNGGDLMYHIQQ-VGKFKEPHAVFYAAEIAI 112 (324)
T ss_pred eEEEEEcCCEEEEEEcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHH
Confidence 999988889999999998 5788776554 367999999999998764
No 13
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=98.28 E-value=9.1e-06 Score=62.26 Aligned_cols=110 Identities=17% Similarity=0.140 Sum_probs=78.0
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCc--eeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcc
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGG--YQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGI 93 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~--~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~ 93 (143)
.+.+.+.++..+ ||.||++.+..+++. ..+++.-..... .+. ...+..|+.++.++ ..+++
T Consensus 5 ~~~~~~~lg~g~---------~g~v~~~~~~~~~~~~~~~~ik~~~~~~~-~~~------~~~~~~e~~~l~~l-~h~~i 67 (267)
T cd05066 5 CIKIEKVIGAGE---------FGEVCSGRLKLPGKREIPVAIKTLKAGYT-EKQ------RRDFLSEASIMGQF-DHPNI 67 (267)
T ss_pred HeEeeeeecccC---------CCceEEEEEecCCCCceEEEEEECCCCCC-HHH------HHHHHHHHHHHHhC-CCCCc
Confidence 355666665544 899999988766553 225554322111 111 12356688887776 45789
Q ss_pred cEEEEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 94 PEVYYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 94 P~l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++++++...+.+.|+|||.+ |.+|.+........++..++..++.|+++
T Consensus 68 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~ 117 (267)
T cd05066 68 IHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIAS 117 (267)
T ss_pred ceEEEEEecCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999 67999887765678999999999988764
No 14
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=98.26 E-value=1.2e-05 Score=63.06 Aligned_cols=109 Identities=17% Similarity=0.099 Sum_probs=82.7
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
.+++++.++.++ ||.||++.+..+++.+ |+|.-.... ..........|+.++..+. .+++.+
T Consensus 6 ~y~~~~~lg~G~---------~g~V~~~~~~~~~~~~-aiK~~~~~~-------~~~~~~~~~~E~~~l~~l~-h~niv~ 67 (303)
T cd07869 6 SYEKLEKLGEGS---------YATVYKGKSKVNGKLV-ALKVIRLQE-------EEGTPFTAIREASLLKGLK-HANIVL 67 (303)
T ss_pred cceEeeeEEecC---------CEEEEEEEECCCCCEE-EEEEecccc-------ccccchhHHHHHHHHhhCC-CCCcCe
Confidence 577777775544 9999999999988887 777642111 0112234556888887764 468899
Q ss_pred EEEeeecCCeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++++...+.+.|+|||.++.+|.+......+.++...+..++.|+++
T Consensus 68 ~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~ 114 (303)
T cd07869 68 LHDIIHTKETLTLVFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLR 114 (303)
T ss_pred EEEEEecCCeEEEEEECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999998876655677999999999999864
No 15
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=98.26 E-value=1.1e-05 Score=64.21 Aligned_cols=110 Identities=15% Similarity=0.067 Sum_probs=80.8
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
+|++++.++.++ ||.||++.+..+++.+ |+|.=.. ... ........+..|+.++.++. .+++++
T Consensus 2 ~y~~~~~ig~G~---------~g~Vy~~~~~~~~~~v-aiK~~~~----~~~-~~~~~~~~~~~e~~~l~~~~-h~~iv~ 65 (333)
T cd05600 2 DFQILTQVGQGG---------YGQVFLAKKKDTGEIV-ALKRMKK----SLL-FKLNEVRHVLTERDILTTTK-SEWLVK 65 (333)
T ss_pred CcEEEEEEeecC---------CeEEEEEEECCCCCEE-EEEEEEH----HHH-hhhhHHHHHHHHHHHHHhCC-CCCCcc
Confidence 567788886654 9999999999988877 7765321 100 00111223566777777664 678999
Q ss_pred EEEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++....+.+.|+|||.+ |.+|.++... .+.++...+..++.|++.
T Consensus 66 ~~~~~~~~~~~~lv~e~~~g~~L~~~l~~-~~~l~~~~~~~~~~qi~~ 112 (333)
T cd05600 66 LLYAFQDDEYLYLAMEYVPGGDFRTLLNN-LGVLSEDHARFYMAEMFE 112 (333)
T ss_pred EEEEEEcCCEEEEEEeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHH
Confidence 999999999999999988 7899998765 367888888888888764
No 16
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=98.26 E-value=1.3e-05 Score=62.27 Aligned_cols=109 Identities=16% Similarity=0.096 Sum_probs=77.1
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEE-ecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVL-SLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~-Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
|++.+.++.++ ||.||++.+..++..+ |+|. +.. .. +..........|+.++.++. .++++.
T Consensus 2 y~~~~~lg~G~---------~g~V~~~~~~~~~~~v-avK~~~~~-----~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~ 64 (285)
T cd05605 2 FRHYRVLGKGG---------FGEVCACQVRATGKMY-ACKKLEKK-----RI-KKRKGEAMALNEKQILEKVN-SRFVVS 64 (285)
T ss_pred ceEEEEEecCC---------CeEEEEEEEcCCCceE-EEEEEehh-----hh-hhhhhHHHHHHHHHHHHhcC-CCCEee
Confidence 45566665544 9999999998888777 6654 310 00 00111122456888887774 467888
Q ss_pred EEEeeecCCeeEEeeccc-CcCHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELL-GPSLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
+++....+.+.++||+.+ |.+|.+..... ...++...+..++.|+++
T Consensus 65 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~ 113 (285)
T cd05605 65 LAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITC 113 (285)
T ss_pred eeeeecCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHH
Confidence 999988889999999988 57898776554 567999999999999864
No 17
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=98.24 E-value=8.9e-06 Score=66.19 Aligned_cols=109 Identities=17% Similarity=0.088 Sum_probs=79.4
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEE
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEV 96 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l 96 (143)
|++++.++.++ ||.||+|.+..++..| |+|.-.. .+... ......+..|+.++.++ ..++++++
T Consensus 3 f~~~~~LG~G~---------~g~Vy~~~~~~~~~~~-aiK~i~~----~~~~~-~~~~~~~~~E~~il~~l-~h~~iv~l 66 (381)
T cd05626 3 FVKIKTLGIGA---------FGEVCLACKVDTHALY-AMKTLRK----KDVLN-RNQVAHVKAERDILAEA-DNEWVVKL 66 (381)
T ss_pred ceEEEEEeecC---------CEEEEEEEECCCCCEE-EEEEEEH----HHhhh-hHHHHHHHHHHHHHHhc-CCCCeeee
Confidence 56677776544 9999999999998888 7776421 01000 01122466788887765 45689999
Q ss_pred EEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 97 YYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 97 ~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++....+.+.|+|||++ |.+|.++.... +.++...+..++.|++.
T Consensus 67 ~~~~~~~~~~~lv~E~~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~ 112 (381)
T cd05626 67 YYSFQDKDNLYFVMDYIPGGDMMSLLIRM-EVFPEVLARFYIAELTL 112 (381)
T ss_pred EEEEecCCEEEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHH
Confidence 99999999999999998 67998876653 67888888888888753
No 18
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=98.24 E-value=6.3e-06 Score=66.25 Aligned_cols=110 Identities=19% Similarity=0.154 Sum_probs=81.2
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
+|++++.++.++ ||.||++.+..++..+ |+|.-... +.. .......+..|+.++.++. .+++++
T Consensus 2 ~y~~~~~lG~G~---------~g~V~~~~~~~~~~~v-aiK~~~~~----~~~-~~~~~~~~~~E~~il~~l~-h~~iv~ 65 (364)
T cd05599 2 DFESIKVIGRGA---------FGEVRLVQKKDTGHIY-AMKKLRKS----EML-EKEQVAHVRAERDILAEAD-NPWVVK 65 (364)
T ss_pred CceEEEEEEecC---------CEEEEEEEECCCCCEE-EEEEEEHH----Hhh-hhhHHHHHHHHHHHHHhCC-CCCCcc
Confidence 466777776644 9999999999998877 77764211 100 0011123566888887764 578999
Q ss_pred EEEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++....+.+.|+|||++ |.+|.++... .+.|+...+..++.|++.
T Consensus 66 ~~~~~~~~~~~~lv~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~ 112 (364)
T cd05599 66 LYYSFQDENYLYLIMEYLPGGDMMTLLMK-KDTFTEEETRFYIAETIL 112 (364)
T ss_pred eEEEEEcCCeEEEEECCCCCcHHHHHHHH-cCCCCHHHHHHHHHHHHH
Confidence 999999999999999998 6788887654 467999999999999864
No 19
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=98.21 E-value=1.5e-05 Score=64.30 Aligned_cols=110 Identities=17% Similarity=0.120 Sum_probs=80.5
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
+|++++.++.++ ||.||.+.+..++..| |+|+-.. .+... ......+..|..++.++ ..+++++
T Consensus 2 ~y~~~~~LG~G~---------~g~V~~~~~~~~~~~~-aiK~~~~----~~~~~-~~~~~~~~~E~~il~~~-~~~~iv~ 65 (363)
T cd05628 2 DFESLKVIGRGA---------FGEVRLVQKKDTGHVY-AMKILRK----ADMLE-KEQVGHIRAERDILVEA-DSLWVVK 65 (363)
T ss_pred CceEeEEEEeCC---------CEEEEEEEECCCCCEE-EEEEEEH----HHHHH-hhHHHHHHHHHHHHHhC-CCCCcce
Confidence 466777775544 9999999999998877 8876421 11100 11122456677777766 4578999
Q ss_pred EEEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++....+.+.|+|||++ |.+|.++... .+.++...+..++.|++.
T Consensus 66 ~~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~ 112 (363)
T cd05628 66 MFYSFQDKLNLYLIMEFLPGGDMMTLLMK-KDTLTEEETQFYIAETVL 112 (363)
T ss_pred EEEEEecCCeEEEEEcCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHH
Confidence 999999999999999998 6788887654 467999999999988764
No 20
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=98.21 E-value=2e-05 Score=61.41 Aligned_cols=109 Identities=17% Similarity=0.162 Sum_probs=81.6
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
.+++++.++.++ ||.||++.+..++..+ |+|.=.... ..........|+.++.++. .+++.+
T Consensus 6 ~y~~~~~lg~G~---------~g~Vy~~~~~~~~~~v-aiK~~~~~~-------~~~~~~~~~~E~~~l~~l~-h~niv~ 67 (288)
T cd07871 6 TYVKLDKLGEGT---------YATVFKGRSKLTENLV-ALKEIRLEH-------EEGAPCTAIREVSLLKNLK-HANIVT 67 (288)
T ss_pred cceEeeEEecCC---------CEEEEEEEECCCCCEE-EEEEecccc-------cCCcchhHHHHHHHHHhCC-CCCEee
Confidence 467777775544 9999999999988877 776432110 0111224567888887774 468999
Q ss_pred EEEeeecCCeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++++..+.+.|+|||.++.+|.+.....+..++...+..++.|+++
T Consensus 68 ~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~ 114 (288)
T cd07871 68 LHDIIHTERCLTLVFEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLR 114 (288)
T ss_pred EEEEEcCCCeEEEEEeCCCcCHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999998877666667899999998888764
No 21
>PHA03209 serine/threonine kinase US3; Provisional
Probab=98.20 E-value=9.6e-06 Score=65.49 Aligned_cols=102 Identities=13% Similarity=0.099 Sum_probs=81.3
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
.|++++.++.++ ||.||++.+..++..+ ++|.... .....|+.++.++. .+++++
T Consensus 67 ~y~~~~~lg~G~---------~g~Vy~~~~~~~~~~v-alK~~~~--------------~~~~~E~~~l~~l~-h~~iv~ 121 (357)
T PHA03209 67 GYTVIKTLTPGS---------EGRVFVATKPGQPDPV-VLKIGQK--------------GTTLIEAMLLQNVN-HPSVIR 121 (357)
T ss_pred CcEEEEEecCCC---------CeEEEEEEECCCCceE-EEEeCCc--------------cccHHHHHHHHhCC-CCCCcC
Confidence 478888886644 9999999999888877 8886421 12345777777664 468999
Q ss_pred EEEeeecCCeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++....+.+.++||+.++.+|.+......+.++...+.+++.|++.
T Consensus 122 ~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~ 168 (357)
T PHA03209 122 MKDTLVSGAITCMVLPHYSSDLYTYLTKRSRPLPIDQALIIEKQILE 168 (357)
T ss_pred hhheEEeCCeeEEEEEccCCcHHHHHHhccCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999998877655678999999999999764
No 22
>PHA03212 serine/threonine kinase US3; Provisional
Probab=98.20 E-value=1.2e-05 Score=66.22 Aligned_cols=103 Identities=15% Similarity=0.085 Sum_probs=82.5
Q ss_pred eeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcc
Q psy16459 14 KCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGI 93 (143)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~ 93 (143)
+..|++++.++.++ ||.||++.|..+++.+ |+|... +.....|+.++.++.. +++
T Consensus 91 ~~~y~~~~~lg~G~---------~g~V~~~~d~~~~~~v-aiK~~~--------------~~~~~~E~~il~~l~H-pnI 145 (391)
T PHA03212 91 KAGFSILETFTPGA---------EGFAFACIDNKTCEHV-VIKAGQ--------------RGGTATEAHILRAINH-PSI 145 (391)
T ss_pred cCCcEEEEEEcCCC---------CeEEEEEEECCCCCEE-EEechh--------------hhhhHHHHHHHHhCCC-CCC
Confidence 34688888886655 9999999999999887 887531 1235679999888754 689
Q ss_pred cEEEEeeecCCeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 94 PEVYYFGPCGKYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 94 P~l~~~G~~~~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.+++++...+.+.++||+.++.+|.+.... .+.++...+..++.|+++
T Consensus 146 v~~~~~~~~~~~~~lv~e~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~ 193 (391)
T PHA03212 146 IQLKGTFTYNKFTCLILPRYKTDLYCYLAA-KRNIAICDILAIERSVLR 193 (391)
T ss_pred CCEeEEEEECCeeEEEEecCCCCHHHHHHh-cCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999888776544 367899999999998864
No 23
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=98.20 E-value=2.6e-05 Score=60.92 Aligned_cols=109 Identities=17% Similarity=0.159 Sum_probs=82.6
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
.|++++.++.++ ||.||++.+..+++.+ |+|.-..... .........|+.++..+. .+++++
T Consensus 7 ~y~~~~~lg~g~---------~g~vy~~~~~~~~~~v-aiK~~~~~~~-------~~~~~~~~~E~~~l~~l~-h~nI~~ 68 (301)
T cd07873 7 TYIKLDKLGEGT---------YATVYKGRSKLTDNLV-ALKEIRLEHE-------EGAPCTAIREVSLLKDLK-HANIVT 68 (301)
T ss_pred ceEEeeEeccCc---------CEEEEEEEEcCCCcEE-EEEEEecccc-------cCchhHHHHHHHHHHhcC-CCCcce
Confidence 678888886654 9999999999888877 7765322110 011223456788877774 468999
Q ss_pred EEEeeecCCeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++++...+.+.|+|||.++.+|.+........++...+..++.|+++
T Consensus 69 ~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~ 115 (301)
T cd07873 69 LHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLR 115 (301)
T ss_pred EEEEEecCCeEEEEEeccccCHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999998877665677999999999998864
No 24
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=98.20 E-value=3.5e-05 Score=59.18 Aligned_cols=109 Identities=20% Similarity=0.185 Sum_probs=80.6
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEE
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEV 96 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l 96 (143)
+++.+.++..+ ||.||++.+..++..+ ++|.-... ...+ ........|+.++.++. .++++++
T Consensus 2 y~~~~~l~~g~---------~~~v~~~~~~~~~~~~-~vK~~~~~-~~~~-----~~~~~~~~e~~~l~~~~-~~~i~~~ 64 (286)
T cd07832 2 YKILGRIGEGA---------HGIVFKAKDRETGETV-ALKKVALR-RLEG-----GIPNQALREIKALQACQ-HPYVVKL 64 (286)
T ss_pred ceEEeecccCC---------CcEEEEEEECCCCceE-EEEEEEcc-cccc-----hhhHHHHHHHHHHHhCC-CCCCcce
Confidence 56666675544 8999999999888877 66543211 1000 00123556777777775 6789999
Q ss_pred EEeeecCCeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 97 YYFGPCGKYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 97 ~~~G~~~~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++....+.+.|+||+.+|.+|.++.....+.++...+..++.|+++
T Consensus 65 ~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~ 110 (286)
T cd07832 65 LDVFPHGSGFVLVMEYMPSDLSEVLRDEERPLPEAQVKSYMRMLLK 110 (286)
T ss_pred eeEEecCCeeEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 9999999999999999999999987765677999999999988764
No 25
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=98.20 E-value=1.5e-05 Score=62.10 Aligned_cols=110 Identities=13% Similarity=0.064 Sum_probs=81.4
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
++++.+.++..+ ||.||++.+..++..+ |+|.-........ ......|..+..+..+.+++++
T Consensus 16 ~~~~~~~lg~g~---------~~~v~~~~~~~~~~~~-avK~~~~~~~~~~-------~~~~~~e~~~~~~~~~~~~i~~ 78 (296)
T cd06618 16 DLENLGEIGSGT---------CGQVYKMRFKKTGHVM-AVKQMRRTGNKEE-------NKRILMDLDVVLKSHDCPYIVK 78 (296)
T ss_pred hheeeeEeeccC---------CeEEEEEEECCCCeEE-EEEEEeccCChHH-------HHHHHHHHHHHHhccCCCchHh
Confidence 566666665543 8999999998887777 7776432111111 1123345556666666789999
Q ss_pred EEEeeecCCeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++++...+.+.|+||++++.++.+++....+.++..++..++.|+++
T Consensus 79 ~~~~~~~~~~~~~v~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~ 125 (296)
T cd06618 79 CYGYFITDSDVFICMELMSTCLDKLLKRIQGPIPEDILGKMTVAIVK 125 (296)
T ss_pred hheeeecCCeEEEEeeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999998876668999999999988763
No 26
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=98.19 E-value=1e-05 Score=64.49 Aligned_cols=110 Identities=22% Similarity=0.176 Sum_probs=80.6
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
+|.+++.++.++ ||.||++.+..+++.+ |+|.-.. .+.. ..........|..++..+. .+++++
T Consensus 2 ~y~~~~~lg~G~---------~g~Vy~~~~~~~~~~~-aiK~~~~----~~~~-~~~~~~~~~~e~~~l~~~~-~~~i~~ 65 (350)
T cd05573 2 DFEVIKVIGRGA---------FGEVWLVRDKDTGQVY-AMKVLRK----SDMI-KRNQIAHVRAERDILADAD-SPWIVK 65 (350)
T ss_pred CceEEEEEEeCC---------cEEEEEEEECCCCCEE-EEEEEEH----HHHh-hccHHHHHHHHHHHHHhcC-CCCccc
Confidence 467777776654 9999999999998888 7776421 1110 0011123455677766654 568999
Q ss_pred EEEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++.....+.+.|+|||++ |.+|.++.... +.++...+..++.|++.
T Consensus 66 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~ 112 (350)
T cd05573 66 LYYSFQDEEHLYLVMEYMPGGDLMNLLIRK-DVFPEETARFYIAELVL 112 (350)
T ss_pred hhhheecCCeEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHH
Confidence 999988999999999998 78999887654 78999999999998864
No 27
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=98.18 E-value=1.8e-05 Score=61.51 Aligned_cols=110 Identities=21% Similarity=0.115 Sum_probs=81.4
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
++++.+.++..+ ||.||.+.+..+++.+ |+|.-.-. .. ........+..|+.++.++. .++++.
T Consensus 2 ~y~~~~~ig~g~---------~~~vy~~~~~~~~~~~-aiK~~~~~----~~-~~~~~~~~~~~e~~~l~~l~-h~~i~~ 65 (290)
T cd05580 2 DFEFIKTLGTGS---------FGRVMLVRHKGSGKYY-ALKILSKA----KI-VKLKQVEHVLNEKRILQSIR-HPFLVN 65 (290)
T ss_pred ceEEEEEeecCC---------CeEEEEEEEcCCCCEE-EEEEEEHH----Hh-hhhhHHHHHHHHHHHHHhCC-CCCccc
Confidence 466677775544 8999999999888877 77764210 00 00111223566788777775 678999
Q ss_pred EEEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++....+.+.|+|||.+ |.+|.+..... +.++..++..++.|+++
T Consensus 66 ~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qil~ 112 (290)
T cd05580 66 LYGSFQDDSNLYLVMEYVPGGELFSHLRKS-GRFPEPVARFYAAQVVL 112 (290)
T ss_pred eeeEEEcCCeEEEEEecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHH
Confidence 999999999999999999 89999886654 78999999999998874
No 28
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=98.17 E-value=1.7e-05 Score=62.27 Aligned_cols=112 Identities=13% Similarity=0.132 Sum_probs=79.0
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
++++...++.++ ||.||+|.+..++..+ .+++......... .....+..|+.++.++.+.+++++
T Consensus 8 ~~~~~~~lg~G~---------~g~V~~a~~~~~~~~~-~~~ik~~~~~~~~-----~~~~~~~~Ei~~l~~l~~h~~iv~ 72 (303)
T cd05088 8 DIKFQDVIGEGN---------FGQVLKARIKKDGLRM-DAAIKRMKEYASK-----DDHRDFAGELEVLCKLGHHPNIIN 72 (303)
T ss_pred hceeeeeecCCC---------CceEEEEEEccCCcee-eEEEEEecccCCH-----HHHHHHHHHHHHHHHhcCCCCcce
Confidence 566777776544 9999999988776654 2333221111000 001235568888888877789999
Q ss_pred EEEeeecCCeeEEeeccc-CcCHHHHHHhc---------------CCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELL-GPSLEDLFDLC---------------NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~---------------~~~fs~~T~~~ia~q~l~ 142 (143)
++++...+.+.|+|||.+ |.+|.++.... ...++..++..++.|+++
T Consensus 73 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~ 135 (303)
T cd05088 73 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVAR 135 (303)
T ss_pred EEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHH
Confidence 999999999999999998 67999876532 136899999999998764
No 29
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=98.17 E-value=3.7e-05 Score=60.34 Aligned_cols=109 Identities=17% Similarity=0.144 Sum_probs=81.7
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
.+.+++.++.++ ||.||++.+..+++.+ |+|.-.... ..........|+.++..+. .+++.+
T Consensus 7 ~y~~~~~lg~G~---------~g~Vy~~~~~~~~~~v-aiK~~~~~~-------~~~~~~~~~~E~~~l~~l~-h~~iv~ 68 (309)
T cd07872 7 TYIKLEKLGEGT---------YATVFKGRSKLTENLV-ALKEIRLEH-------EEGAPCTAIREVSLLKDLK-HANIVT 68 (309)
T ss_pred ceEEEEEecccC---------CEEEEEEEecCCCCeE-EEEEeeccc-------cCCcchhHHHHHHHHHhCC-CCCcce
Confidence 477788886655 9999999999888877 776432110 0111223456888777664 468999
Q ss_pred EEEeeecCCeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++....+...|+|||.++.+|.+.....+..++...+..++.|+++
T Consensus 69 ~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~ 115 (309)
T cd07872 69 LHDIVHTDKSLTLVFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILR 115 (309)
T ss_pred EEEEEeeCCeEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999998877666667899999999988764
No 30
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=98.16 E-value=4.6e-05 Score=58.30 Aligned_cols=110 Identities=14% Similarity=0.133 Sum_probs=80.2
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCc--eeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcc
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGG--YQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGI 93 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~--~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~ 93 (143)
++.+.+.++..+ ||.||++.+..+++. ..++|+-....+-... ..+..|+.++.++ ..+++
T Consensus 5 ~~~~~~~lg~g~---------~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~-------~~~~~e~~~l~~l-~h~ni 67 (269)
T cd05065 5 CVKIEEVIGAGE---------FGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQR-------RDFLSEASIMGQF-DHPNI 67 (269)
T ss_pred HeEEEeEecCCC---------CCeEEEEEEecCCCCceeEEEEEcCCCCCHHHH-------HHHHHHHHHHHhC-CCcCc
Confidence 456677775544 999999988877653 3377775432221111 1356677777765 45789
Q ss_pred cEEEEeeecCCeeEEeecccC-cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 94 PEVYYFGPCGKYNALVMELLG-PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 94 P~l~~~G~~~~~~~iVM~LlG-~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++++++...+...++|||.++ .+|.++.+...+.|+..++..++.|++.
T Consensus 68 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~ 117 (269)
T cd05065 68 IHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAA 117 (269)
T ss_pred ceEEEEECCCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHH
Confidence 999999999999999999985 5898887766678999999999998764
No 31
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=98.15 E-value=2.7e-05 Score=62.10 Aligned_cols=111 Identities=14% Similarity=0.113 Sum_probs=79.1
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
+|.+++.++.++ ||.||++.+..++..+ |+|.=.- ..... ......+..|..++.. ...++++.
T Consensus 2 ~y~i~~~lG~G~---------fg~V~~~~~~~~~~~~-aiK~~~~----~~~~~-~~~~~~~~~e~~~l~~-~~~~~i~~ 65 (331)
T cd05624 2 DFEIIKVIGRGA---------FGEVAVVKMKHTERIY-AMKILNK----WEMLK-RAETACFREERNVLVN-GDCQWITT 65 (331)
T ss_pred CceEEEEEeeCC---------CeEEEEEEECCCCCEE-EEEEEeH----HHHHh-hHHHHHHHHHHHHHHh-CCCCCEee
Confidence 467788886655 9999999999988877 7775310 00000 0111224445555543 35578999
Q ss_pred EEEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++++...+.+.|+|||++ |.+|.++.....+.++...+..++.|++.
T Consensus 66 l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~ 113 (331)
T cd05624 66 LHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVL 113 (331)
T ss_pred EEEEEEcCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 999999999999999986 78999987766678999999988888764
No 32
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=98.15 E-value=2.6e-05 Score=61.85 Aligned_cols=110 Identities=15% Similarity=0.024 Sum_probs=76.1
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEE
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEV 96 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l 96 (143)
|.+++.++.++ ||.||++.+..++..+ |+|.-.. +. . ...........|..++..+...++++.+
T Consensus 2 f~~~~~lg~G~---------~g~Vy~~~~~~~~~~~-aiK~~~~--~~--~-~~~~~~~~~~~e~~~l~~~~~~~~i~~~ 66 (323)
T cd05616 2 FNFLMVLGKGS---------FGKVMLAERKGTDELY-AIKILKK--DV--V-IQDDDVECTMVEKRVLALSGKPPFLTQL 66 (323)
T ss_pred ceEEEEEeeCC---------CeEEEEEEECCCCCEE-EEEEEEH--HH--h-hhhhHHHHHHHHHHHHHhccCCCeEeeE
Confidence 56677775544 9999999999888877 7765321 00 0 0001111234455665555556788899
Q ss_pred EEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 97 YYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 97 ~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+.+...+.+.|+|||.+ |-+|.+.... .+.|+..++..++.|++.
T Consensus 67 ~~~~~~~~~~~lv~E~~~~g~L~~~~~~-~~~~~~~~~~~~~~qi~~ 112 (323)
T cd05616 67 HSCFQTMDRLYFVMEYVNGGDLMYQIQQ-VGRFKEPHAVFYAAEIAI 112 (323)
T ss_pred EEEEecCCEEEEEEcCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHH
Confidence 99998899999999988 4688766544 367999999999998764
No 33
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=98.15 E-value=3.4e-05 Score=62.39 Aligned_cols=109 Identities=17% Similarity=0.102 Sum_probs=79.4
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEE
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEV 96 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l 96 (143)
|++++.++.++ ||.||++.+..+++.+ |+|.-.. .+.. .......+..|+.++.++. .++++++
T Consensus 3 y~~~~~lG~G~---------~g~V~~a~~~~~~~~~-avK~~~~----~~~~-~~~~~~~~~~E~~il~~l~-h~~iv~~ 66 (376)
T cd05598 3 FVKIKTIGIGA---------FGEVCLVRKVDTNALY-AMKTLRK----ADVL-MRNQAAHVKAERDILAEAD-NEWVVKL 66 (376)
T ss_pred ceEEEEEEeCC---------CeEEEEEEECCCCCEE-EEEEEcH----HHHH-hhhhHHHHHHHHHHHHhCC-CCCcceE
Confidence 56777776654 9999999999998877 7776311 1110 1112334667888877764 4688999
Q ss_pred EEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 97 YYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 97 ~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++....+.+.|+|||++ |.+|.++.... +.++...+..++.|++.
T Consensus 67 ~~~~~~~~~~~lv~E~~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~ 112 (376)
T cd05598 67 YYSFQDKDNLYFVMDYIPGGDMMSLLIRL-GIFEEDLARFYIAELTC 112 (376)
T ss_pred EEEEEcCCEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHH
Confidence 99988899999999998 78999886653 67888888888888753
No 34
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=98.15 E-value=4e-05 Score=60.18 Aligned_cols=111 Identities=18% Similarity=0.097 Sum_probs=81.8
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
+|.+++.++..+ ||.||.+.+..+++.+ ++|.-... ...... ....+..|+.++..+. .+++++
T Consensus 2 ~y~~~~~ig~g~---------~g~vy~~~~~~~~~~~-aiK~~~~~-~~~~~~----~~~~~~~e~~~l~~l~-~~~i~~ 65 (316)
T cd05574 2 HFKKIKLLGKGD---------VGRVFLVRLKGTGKLF-ALKVLDKK-EMIKRN----KVKRVLTEQEILATLD-HPFLPT 65 (316)
T ss_pred ceEEeeeecCCc---------cEEEEEEEEcCCCcEE-EEEEEecc-ccchHH----HHHHHHHHHHHHHhCC-CCCchh
Confidence 467777776554 8999999999988877 87765321 111100 0112456777766664 678999
Q ss_pred EEEeeecCCeeEEeeccc-CcCHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELL-GPSLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
+++....+.+.|+||+.+ |.+|.++.... +..|+...+..++.|+++
T Consensus 66 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~ 114 (316)
T cd05574 66 LYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLL 114 (316)
T ss_pred heeeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHH
Confidence 999999999999999965 78999987765 678999999999888764
No 35
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=98.14 E-value=5.1e-05 Score=58.46 Aligned_cols=115 Identities=17% Similarity=0.128 Sum_probs=81.6
Q ss_pred ccceeeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhh
Q psy16459 9 SMSLLKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQ 88 (143)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~ 88 (143)
........|+++..++..+ ||.||+|.+..++..+ ++|.-..... ....+..|..++..+.
T Consensus 12 ~~~~~~~~~~~~~~lg~g~---------~~~vy~~~~~~~~~~~-~ik~~~~~~~---------~~~~~~~e~~~l~~l~ 72 (286)
T cd06638 12 SFPDPSDTWEIIETIGKGT---------YGKVFKVLNKKNGSKA-AVKILDPIHD---------IDEEIEAEYNILKALS 72 (286)
T ss_pred cCCCcccceeeeeeeccCC---------CcEEEEEEECCCCcee-EEEeeccccc---------hHHHHHHHHHHHHHHh
Confidence 3344556788888886655 8999999999888877 7775311000 0123556888888887
Q ss_pred cCCcccEEEEeee-----cCCeeEEeeccc-CcCHHHHHHh-c--CCCCCHHHHHHHHHHHhc
Q psy16459 89 SNKGIPEVYYFGP-----CGKYNALVMELL-GPSLEDLFDL-C--NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 89 ~~~~~P~l~~~G~-----~~~~~~iVM~Ll-G~sL~~l~~~-~--~~~fs~~T~~~ia~q~l~ 142 (143)
.-++++++++.+. .+.+.|+|||.+ |.+|.++... . ...++...+..++.|+++
T Consensus 73 ~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~ 135 (286)
T cd06638 73 DHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALM 135 (286)
T ss_pred cCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHH
Confidence 7778999988763 456789999988 6899987543 2 456888888888877653
No 36
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=98.14 E-value=4.6e-05 Score=58.48 Aligned_cols=110 Identities=13% Similarity=0.074 Sum_probs=77.6
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCC--CceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcc
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSG--GGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGI 93 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~--~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~ 93 (143)
+|++...++.++ ||.||++.+..+. +...|+|+--.+.+.... .....|+.++.++ ..+++
T Consensus 6 ~~~~~~~ig~G~---------fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~-------~~~~~e~~~l~~l-~h~~i 68 (266)
T cd05064 6 SIKIERILGTGR---------FGELCRGCLKLPSKRELPVAIHTLRAGCSDKQR-------RGFLAEALTLGQF-DHSNI 68 (266)
T ss_pred HeEEeeeecccC---------CCeEEEEEEecCCCceeeEEEEecCCCCCHHHH-------HHHHHHHHHHhcC-CCCCc
Confidence 577777776644 9999998654333 334477665433222111 1245677777665 56799
Q ss_pred cEEEEeeecCCeeEEeecccCc-CHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 94 PEVYYFGPCGKYNALVMELLGP-SLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 94 P~l~~~G~~~~~~~iVM~LlG~-sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++++....+.+.|+|||.++. +|.++.......++...+..++.|++.
T Consensus 69 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~ 118 (266)
T cd05064 69 VRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLAS 118 (266)
T ss_pred CeEEEEEecCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence 9999999999999999999964 788876655568999999999998764
No 37
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=98.13 E-value=2.6e-05 Score=61.83 Aligned_cols=111 Identities=20% Similarity=0.155 Sum_probs=79.8
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
.|++.+.++.++ ||.||++.+..+++.+ |+|.-... .. ........+..|..++.. ...+++++
T Consensus 2 ~y~~~~~lg~G~---------~g~Vy~~~~~~~~~~~-aiK~~~~~----~~-~~~~~~~~~~~e~~i~~~-~~~~~i~~ 65 (330)
T cd05601 2 DFDVKSLVGRGH---------FGEVQVVREKATGDIY-AMKVMKKS----VL-LAQETVSFFEEERDILSI-SNSPWIPQ 65 (330)
T ss_pred CceEEEEEEecc---------CEEEEEEEECCCCCEE-EEEEEEHH----Hh-hhhhHHHHHHHHHHHHHh-CCCCCCcc
Confidence 456677775544 9999999999998877 77764211 00 000111234556666554 35678999
Q ss_pred EEEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++....+.+.|+|||.+ |.+|.++.+...+.++...+..++.|+++
T Consensus 66 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~ 113 (330)
T cd05601 66 LQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVL 113 (330)
T ss_pred eeeEEecCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 999888889999999998 78999987766678999999999888764
No 38
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=98.13 E-value=3.4e-05 Score=61.18 Aligned_cols=100 Identities=13% Similarity=-0.031 Sum_probs=75.6
Q ss_pred EEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-
Q psy16459 35 YFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL- 113 (143)
Q Consensus 35 ~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll- 113 (143)
.+||.||++.+..+++.+ |+|.--...+..+. ...+..|+.++..+ .-+++.+++++...+.+.|+||+++
T Consensus 11 ~~~~~v~~~~~~~~~~~v-aiK~~~~~~~~~~~------~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~ 82 (327)
T cd08227 11 EDLMTVNLARYKPTGEYV-TVRRINLEACTNEM------VTFLQGELHVSKLF-NHPNIVPYRATFIADNELWVVTSFMA 82 (327)
T ss_pred cceEEEEEEeecccCcEE-EEEEechhhccHHH------HHHHHHHHHHHHhc-CCCCeeeEEEEEEECCEEEEEEeccC
Confidence 358899999999999987 77754221111111 12466788887766 4478999999999999999999998
Q ss_pred CcCHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 114 GPSLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 114 G~sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
|.+|.++.... .+.++..++..++.|++.
T Consensus 83 ~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~ 112 (327)
T cd08227 83 YGSAKDLICTHFMDGMSELAIAYILQGVLK 112 (327)
T ss_pred CCcHHHHHHhhccCCCCHHHHHHHHHHHHH
Confidence 47999988765 567999999999998764
No 39
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=98.13 E-value=3.1e-05 Score=62.35 Aligned_cols=110 Identities=16% Similarity=0.143 Sum_probs=79.8
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
+|++++.++.++ ||.||.|.+..++..+ |+|.-.. .+... ......+..|..++.++ ..+++++
T Consensus 2 ~f~~~~~lG~G~---------~g~V~~~~~~~~~~~~-aiK~~~~----~~~~~-~~~~~~~~~e~~~l~~l-~~~~iv~ 65 (360)
T cd05627 2 DFESLKVIGRGA---------FGEVRLVQKKDTGHIY-AMKILRK----ADMLE-KEQVAHIRAERDILVEA-DGAWVVK 65 (360)
T ss_pred CceEEEEEeeCC---------CEEEEEEEECCCCCEE-EEEEEEH----HHHhh-hhhHHHHHHHHHHHHhC-CCCCEee
Confidence 466777776554 9999999999998877 7776421 11100 11123456677777766 4468899
Q ss_pred EEEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++....+.+.|+|||.+ |.+|.++... .+.++...+..++.|++.
T Consensus 66 ~~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~ 112 (360)
T cd05627 66 MFYSFQDKRNLYLIMEFLPGGDMMTLLMK-KDTLSEEATQFYIAETVL 112 (360)
T ss_pred EEEEEEcCCEEEEEEeCCCCccHHHHHHh-cCCCCHHHHHHHHHHHHH
Confidence 999999999999999998 6788887654 367899999998888764
No 40
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=98.13 E-value=3.9e-05 Score=59.37 Aligned_cols=109 Identities=19% Similarity=0.185 Sum_probs=81.4
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
.+++.+.++.++ ||.||++.+..++..| ++|.-.... ..........|+.++.++. .+++++
T Consensus 6 ~y~~~~~lg~g~---------~~~vy~~~~~~~~~~~-~iK~~~~~~-------~~~~~~~~~~E~~~l~~l~-h~~i~~ 67 (291)
T cd07844 6 TYKKLDKLGEGS---------YATVYKGRSKLTGQLV-ALKEIRLEH-------EEGAPFTAIREASLLKDLK-HANIVT 67 (291)
T ss_pred ceeEEEEEeecC---------CeEEEEEEEcCCCcEE-EEEEEeccc-------ccCCchhHHHHHHHHhhCC-Ccceee
Confidence 567777775543 9999999998888877 776532110 0111223456888888774 468999
Q ss_pred EEEeeecCCeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++....+.+.|+|||.++.+|.++.....+.++..++..++.|+++
T Consensus 68 ~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~ 114 (291)
T cd07844 68 LHDIIHTKKTLTLVFEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLR 114 (291)
T ss_pred EEEEEecCCeEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999998877665568899999999988764
No 41
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=98.12 E-value=2.8e-05 Score=60.36 Aligned_cols=110 Identities=16% Similarity=0.093 Sum_probs=80.4
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
++++...++..+ ||.||++.+..+++.+ ++|.-.... . .......+..|+.++.++. .+++++
T Consensus 3 ~y~~~~~l~~g~---------~~~v~~~~~~~~~~~~-~iK~~~~~~-~-----~~~~~~~~~~e~~~l~~l~-h~~i~~ 65 (294)
T PLN00009 3 QYEKVEKIGEGT---------YGVVYKARDRVTNETI-ALKKIRLEQ-E-----DEGVPSTAIREISLLKEMQ-HGNIVR 65 (294)
T ss_pred ceEEEEEecCCC---------CEEEEEEEecCCCcEE-EEEehhhcc-c-----cccchHHHHHHHHHHHhcc-CCCEee
Confidence 466777775433 8999999999888877 777532110 0 0011234567888888774 478999
Q ss_pred EEEeeecCCeeEEeecccCcCHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELLGPSLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~LlG~sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
++++...+.+.|+|||.++.+|.+..... ...++..++..++.|+++
T Consensus 66 ~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~ 113 (294)
T PLN00009 66 LQDVVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILR 113 (294)
T ss_pred EEEEEecCCeEEEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHH
Confidence 99999999999999999999988877665 556788888888888764
No 42
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=98.12 E-value=7.1e-05 Score=56.73 Aligned_cols=108 Identities=17% Similarity=0.125 Sum_probs=78.1
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEE
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEV 96 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l 96 (143)
+++.+.++..+ ||.||.+.+..+++.| ++|.=....+-.. ......|+.++..+. .++++++
T Consensus 2 y~~~~~lg~g~---------~g~v~~~~~~~~~~~~-~iK~~~~~~~~~~-------~~~~~~e~~~l~~l~-h~~i~~~ 63 (255)
T cd08219 2 YNVLRVVGEGS---------FGRALLVQHVNSDQKY-AMKEIRLPKSSSA-------VEDSRKEAVLLAKMK-HPNIVAF 63 (255)
T ss_pred ceEEEEeeccC---------CeEEEEEEEcCCCceE-EEEEEEcCcchHH-------HHHHHHHHHHHHhCC-CCCcceE
Confidence 45666665543 9999999999999888 6664211111111 113456777766654 4689999
Q ss_pred EEeeecCCeeEEeeccc-CcCHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 97 YYFGPCGKYNALVMELL-GPSLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 97 ~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
++....+.+.|+||+.+ |.+|.+..+.. ++.++...+..++.|+++
T Consensus 64 ~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~ 111 (255)
T cd08219 64 KESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCL 111 (255)
T ss_pred EEEEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHH
Confidence 99999999999999998 67898876655 677999999999988764
No 43
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=98.11 E-value=4e-05 Score=59.26 Aligned_cols=112 Identities=18% Similarity=0.235 Sum_probs=78.1
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhc--CCcc
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQS--NKGI 93 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~--~~~~ 93 (143)
+|++++.++.++ ||.||++.+..+++.+.|+|.-..... ..+.......|..++.++.. .+++
T Consensus 2 ~Y~~~~~lg~G~---------~g~Vy~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~e~~~l~~l~~~~hpni 66 (290)
T cd07862 2 QYECVAEIGEGA---------YGKVFKARDLKNGGRFVALKRVRVQTG------EEGMPLSTIREVAVLRHLETFEHPNV 66 (290)
T ss_pred CcceeeEeccCC---------CeEEEEEEEcCCCCeEEEEEEEecccC------CCCchHHHHHHHHHHHhhcccCCCCc
Confidence 466777776544 999999999777666657775321100 00111234457777776653 4688
Q ss_pred cEEEEeee-----cCCeeEEeecccCcCHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 94 PEVYYFGP-----CGKYNALVMELLGPSLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 94 P~l~~~G~-----~~~~~~iVM~LlG~sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
++++++.. .+...++||+.++.+|.++.... ...++..++..++.|+++
T Consensus 67 v~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~ 121 (290)
T cd07862 67 VRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLR 121 (290)
T ss_pred ceEEEEEecccCCCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHH
Confidence 88887753 34578999999999999988766 567999999999999864
No 44
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=98.10 E-value=6.8e-05 Score=56.55 Aligned_cols=108 Identities=19% Similarity=0.132 Sum_probs=77.6
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEE-EecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALV-LSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~-~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
|++.+.+... .||.||++.+..++..+ +++ ++.-..+-.+ ......|+.++.++ .-+++.+
T Consensus 2 ~~~~~~l~~g---------~~~~v~~~~~~~~~~~~-~~k~~~~~~~~~~~-------~~~~~~e~~~l~~l-~h~~i~~ 63 (256)
T cd08529 2 FEILNKIGKG---------SFGVVFKVVRKADKRVY-AMKQIDLSKMNRRE-------REEAIDEARVLAKL-DSSYIIR 63 (256)
T ss_pred ceEeEEecCC---------CCeEEEEEEEcCCCcEE-EEEEeehhhCCHHH-------HHHHHHHHHHHHhc-CCCCeeh
Confidence 4555555443 38999999999998888 554 3321111111 11245577776665 3568889
Q ss_pred EEEeeecCCeeEEeeccc-CcCHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELL-GPSLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
+++....+.+.|+|||.+ |.+|.++.... +..++..++..++.|+++
T Consensus 64 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~ 112 (256)
T cd08529 64 YYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILL 112 (256)
T ss_pred heeeeccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 999999999999999977 88999987776 678999999999988754
No 45
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=98.10 E-value=2.2e-05 Score=60.94 Aligned_cols=101 Identities=18% Similarity=0.143 Sum_probs=73.3
Q ss_pred ccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccCcC
Q psy16459 37 FGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLGPS 116 (143)
Q Consensus 37 fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG~s 116 (143)
||.||++.+..++..+ ++|.-.....-. . ...-...+..|+.++.++. .+++.+++++...+.+.|+|||.++.+
T Consensus 13 ~~~vy~~~~~~~~~~v-~iK~~~~~~~~~-~--~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~ 87 (298)
T cd07841 13 YAVVYKARDKETGRIV-AIKKIKLGERKE-A--KDGINFTALREIKLLQELK-HPNIIGLLDVFGHKSNINLVFEFMETD 87 (298)
T ss_pred ccEEEEEEECCCCcEE-EEEEEecccccc-c--cchhhHHHHHHHHHHhhcC-CCCChhhhheeecCCEEEEEEcccCCC
Confidence 8999999999888877 665543211100 0 0001223456777777665 568889999998899999999999999
Q ss_pred HHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 117 LEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 117 L~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
|.++.......++...+..++.|+++
T Consensus 88 L~~~i~~~~~~~~~~~~~~~~~qi~~ 113 (298)
T cd07841 88 LEKVIKDKSIVLTPADIKSYMLMTLR 113 (298)
T ss_pred HHHHHhccCCCCCHHHHHHHHHHHHH
Confidence 99887654447999999999999864
No 46
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=98.10 E-value=4.1e-05 Score=59.16 Aligned_cols=99 Identities=19% Similarity=0.084 Sum_probs=75.0
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccCc
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLGP 115 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG~ 115 (143)
.||.||.+.+..++..+ |+|.-..... .+. ...+..|+.++.++.+.++++++++....+...+++|++++.
T Consensus 16 ~~g~vy~~~~~~~~~~~-aiK~~~~~~~-~~~------~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~~ 87 (288)
T cd06616 16 AFGTVNKMLHKPSGTIM-AVKRIRSTVD-EKE------QKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMDI 87 (288)
T ss_pred CceEEEEEEECCCCCEE-EEEEehhccC-hHH------HHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecccC
Confidence 38999999999988877 7764321111 010 123566888888777678999999999999999999999999
Q ss_pred CHHHHHHhc----CCCCCHHHHHHHHHHHhc
Q psy16459 116 SLEDLFDLC----NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 116 sL~~l~~~~----~~~fs~~T~~~ia~q~l~ 142 (143)
++.++.... .+.++..++..++.|+++
T Consensus 88 ~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~ 118 (288)
T cd06616 88 SLDKFYKYVYEVLKSVIPEEILGKIAVATVK 118 (288)
T ss_pred CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHH
Confidence 998876542 467999999999998764
No 47
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=98.09 E-value=6.5e-05 Score=60.04 Aligned_cols=109 Identities=18% Similarity=0.112 Sum_probs=81.4
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCccc
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIP 94 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P 94 (143)
..|++.+.++.++ ||.||++.+..++..+ |++.-..... ... ...+..|+.++.++. .+++.
T Consensus 5 ~~y~~~~~lg~g~---------~g~V~~~~~~~~~~~~-a~k~~~~~~~-~~~------~~~~~~E~~~l~~l~-h~~iv 66 (333)
T cd06650 5 DDFEKISELGAGN---------GGVVFKVSHKPSGLIM-ARKLIHLEIK-PAI------RNQIIRELQVLHECN-SPYIV 66 (333)
T ss_pred hhhheeccccCCC---------CEEEEEEEECCCCcEE-EEEEeecccC-HHH------HHHHHHHHHHHHHCC-CCccc
Confidence 4678888886655 9999999999888877 6665322111 011 123567888888774 56899
Q ss_pred EEEEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 95 EVYYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 95 ~l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++++...+.+.|+|||.+ |.+|.++.+.. +.++...+..++.|+++
T Consensus 67 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~ 114 (333)
T cd06650 67 GFYGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIK 114 (333)
T ss_pred ceeEEEEECCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHH
Confidence 9999999999999999988 78999987653 56888888888888753
No 48
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=98.08 E-value=3.4e-05 Score=59.36 Aligned_cols=108 Identities=18% Similarity=0.153 Sum_probs=81.1
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
+|+|++.++..+ ||.||.+.+..++..+ ++|.-... +.... .....|+.++.++. .+++++
T Consensus 6 ~~~i~~~l~~g~---------~~~v~~~~~~~~~~~~-~iK~~~~~-~~~~~-------~~~~~e~~~l~~l~-h~~i~~ 66 (280)
T cd06611 6 IWEIIGELGDGA---------FGKVYKAQHKETGLFA-AAKIIQIE-SEEEL-------EDFMVEIDILSECK-HPNIVG 66 (280)
T ss_pred HHHHHHHhcCCC---------CceEEEEEEcCCCcEE-EEEEEeeC-CHHHH-------HHHHHHHHHHHhCC-CCceeE
Confidence 466777776544 8999999998877776 77765321 11111 12445777777776 678999
Q ss_pred EEEeeecCCeeEEeecccC-cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELLG-PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~LlG-~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++....+.+.|+|||.+. .+|.++....++.++...+..++.|++.
T Consensus 67 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~ 114 (280)
T cd06611 67 LYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLE 114 (280)
T ss_pred EEEEEecCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 9999999999999999985 5898887766678999999999999754
No 49
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=98.08 E-value=3.1e-05 Score=59.92 Aligned_cols=111 Identities=22% Similarity=0.180 Sum_probs=80.4
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
+|++.+.++..+ ||.||++.+..++..+ ++|.-.... ...........|+.++..+...+++++
T Consensus 2 ~y~~~~~lg~g~---------~g~vy~~~~~~~~~~v-~lK~~~~~~------~~~~~~~~~~~E~~~l~~l~~~~~i~~ 65 (295)
T cd07837 2 AYEKLEKIGEGT---------YGKVYKARDKNTGKLV-ALKKTRLEM------DEEGIPPTALREISLLQMLSESIYIVR 65 (295)
T ss_pred CceEeeEecccC---------CeEEEEEEECCCCcEE-EEEeehhhc------cccCCchHHHHHHHHHHHccCCCCccc
Confidence 466777775544 8999999999988877 777642210 001112345668888888877778999
Q ss_pred EEEeeecCCe-----eEEeecccCcCHHHHHHhc----CCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKY-----NALVMELLGPSLEDLFDLC----NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~-----~~iVM~LlG~sL~~l~~~~----~~~fs~~T~~~ia~q~l~ 142 (143)
+++....... .|+||+.+..+|.+..... ++.|+...+..++.|+++
T Consensus 66 ~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~ 121 (295)
T cd07837 66 LLDVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLK 121 (295)
T ss_pred eeeeEeecCCCCCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHH
Confidence 9988876554 7999999998988775543 246899999999998864
No 50
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=98.08 E-value=4.5e-05 Score=58.44 Aligned_cols=99 Identities=19% Similarity=0.119 Sum_probs=71.9
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecC--CeeEEeeccc
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCG--KYNALVMELL 113 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~--~~~~iVM~Ll 113 (143)
.||.||++.+..++..+ |+|.-.. +.. .........|+.++.++.+.+++++++++...+ .+.++|||.+
T Consensus 11 ~~~~v~~~~~~~~~~~~-aik~~~~--~~~-----~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~ 82 (282)
T cd07831 11 TFSEVLKAQSRKTGKYY-AIKCMKK--HFK-----SLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELM 82 (282)
T ss_pred ccceEEEEEEcCCCcEE-EEEEehh--ccC-----CchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecC
Confidence 48999999998888877 7775321 000 000111234777777777678899999998877 8899999999
Q ss_pred CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 114 GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 114 G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+.+|.+......+.++..++..++.|++.
T Consensus 83 ~~~l~~~l~~~~~~~~~~~~~~~~~qi~~ 111 (282)
T cd07831 83 DMNLYELIKGRKRPLPEKRVKSYMYQLLK 111 (282)
T ss_pred CccHHHHHHhccCCCCHHHHHHHHHHHHH
Confidence 88877765544467899999999999764
No 51
>KOG0663|consensus
Probab=98.07 E-value=1.5e-05 Score=64.97 Aligned_cols=107 Identities=20% Similarity=0.187 Sum_probs=77.1
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEE---EecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCc
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALV---LSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKG 92 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~---~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~ 92 (143)
||+.|..++- | .||.||.+.|+.|++-+ |+| ||.- ..+=..+--.|+.++.++... .
T Consensus 77 efe~lnrI~E-G--------tyGiVYRakdk~t~eIV-ALKr~kmeke---------k~GFPItsLREIniLl~~~H~-N 136 (419)
T KOG0663|consen 77 EFEKLNRIEE-G--------TYGVVYRAKDKKTDEIV-ALKRLKMEKE---------KEGFPITSLREINILLKARHP-N 136 (419)
T ss_pred HHHHHhhccc-C--------cceeEEEeccCCcceeE-Eeeecccccc---------cCCCcchhHHHHHHHHhcCCC-C
Confidence 6777777744 2 49999999999999987 663 3310 111122333477777766532 3
Q ss_pred cc--EEEEeeecCCeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 93 IP--EVYYFGPCGKYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 93 ~P--~l~~~G~~~~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+- +=+-.|..-+--||||+.+-.+|..+...+...|+.+-+-.+..|+|+
T Consensus 137 IV~vkEVVvG~~~d~iy~VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~ 188 (419)
T KOG0663|consen 137 IVEVKEVVVGSNMDKIYIVMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLR 188 (419)
T ss_pred eeeeEEEEeccccceeeeeHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHH
Confidence 32 224457776779999999999999999888889999999999999875
No 52
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=98.06 E-value=4.6e-05 Score=59.01 Aligned_cols=100 Identities=20% Similarity=0.103 Sum_probs=71.5
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-C
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL-G 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll-G 114 (143)
+||.||+|.+..+++.| |+|.-. ...+ +..........|..++.++ +.+++.++++....+.+.|+|||.+ |
T Consensus 5 ~~g~Vy~~~~~~~~~~~-a~K~~~----~~~~-~~~~~~~~~~~E~~il~~l-~hp~i~~~~~~~~~~~~~~lv~e~~~g 77 (277)
T cd05607 5 GFGEVCAVQVKNTGKMY-ACKKLD----KKRL-KKKSGEKMALLEKEILEKV-NSPFIVNLAYAFESKTHLCLVMSLMNG 77 (277)
T ss_pred CceEEEEEEEccCCcEE-EEEEEc----HHHh-hcchhhHHHHHHHHHHHhc-CCCcEEEEEEEEecCCeEEEEEecCCC
Confidence 48999999999998888 655421 0111 0001112234577777776 5678899998888889999999988 7
Q ss_pred cCHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 115 PSLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 115 ~sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
.+|.+..... ...++...+..++.|+++
T Consensus 78 ~~L~~~~~~~~~~~~~~~~~~~~~~qi~~ 106 (277)
T cd05607 78 GDLKYHIYNVGERGLEMERVIHYSAQITC 106 (277)
T ss_pred CCHHHHHHhccccCCCHHHHHHHHHHHHH
Confidence 8998776554 556899999999888764
No 53
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=98.06 E-value=3e-05 Score=62.96 Aligned_cols=109 Identities=17% Similarity=0.105 Sum_probs=78.2
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEE
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEV 96 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l 96 (143)
|++++.++.++ ||.||++.+..++..+ |+|.=.. .+.. .......+..|..++.++ ..++++++
T Consensus 3 f~~~~~LG~G~---------~g~Vy~a~~~~~~~~~-aiK~i~~----~~~~-~~~~~~~~~~E~~il~~~-~h~~iv~~ 66 (382)
T cd05625 3 FVKIKTLGIGA---------FGEVCLARKVDTKALY-AMKTLRK----KDVL-LRNQVAHVKAERDILAEA-DNEWVVRL 66 (382)
T ss_pred cEEEEEEEeCC---------CEEEEEEEECCCCCEE-EEEEEeH----HHhh-hHHHHHHHHHHHHHHHhC-CCCcCCeE
Confidence 56777776544 9999999999998877 7775311 1110 001122466788887776 44689999
Q ss_pred EEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 97 YYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 97 ~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++....+.+.|+|||.+ |.+|.++.... +.++...+..++.|++.
T Consensus 67 ~~~~~~~~~~~lv~E~~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~ 112 (382)
T cd05625 67 YYSFQDKDNLYFVMDYIPGGDMMSLLIRM-GIFPEDLARFYIAELTC 112 (382)
T ss_pred EEEEEeCCEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHH
Confidence 99999999999999998 56888876553 67888888888888753
No 54
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=98.05 E-value=4.7e-05 Score=58.10 Aligned_cols=110 Identities=15% Similarity=0.115 Sum_probs=77.3
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCc--eeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcc
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGG--YQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGI 93 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~--~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~ 93 (143)
+|+..+.++.++ ||.||+|.++.+++. ..++|.-. .+..... ...+..|+.++.++ ..+++
T Consensus 6 ~~~~~~~lg~g~---------~g~vy~~~~~~~~~~~~~~~ik~~~--~~~~~~~-----~~~~~~e~~~l~~l-~h~~i 68 (268)
T cd05063 6 HITKQKVIGAGE---------FGEVFRGILKMPGRKEVAVAIKTLK--PGYTEKQ-----RQDFLSEASIMGQF-SHHNI 68 (268)
T ss_pred HceEeeEecCCC---------CccEEEEEEecCCCCceEEEEEecc--ccCCHHH-----HHHHHHHHHHHhcC-CCCCe
Confidence 456666675544 899999998877664 23555432 2211110 12355677777666 34689
Q ss_pred cEEEEeeecCCeeEEeecccCc-CHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 94 PEVYYFGPCGKYNALVMELLGP-SLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 94 P~l~~~G~~~~~~~iVM~LlG~-sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.+++++.....+.|+|||.++. +|.++.....+.++..++..++.|++.
T Consensus 69 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~ 118 (268)
T cd05063 69 IRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAA 118 (268)
T ss_pred eEEEEEEccCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 9999999999999999998874 888887665678999999999888753
No 55
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=98.04 E-value=0.00011 Score=56.83 Aligned_cols=115 Identities=17% Similarity=0.100 Sum_probs=81.6
Q ss_pred ccceeeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhh
Q psy16459 9 SMSLLKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQ 88 (143)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~ 88 (143)
++......|++...++..+ ||.||+|.+..+++.+ ++|.-...... ...+..|+.++..+.
T Consensus 16 ~~~~~~~~y~~~~~l~~g~---------~~~vy~~~~~~~~~~~-aik~~~~~~~~---------~~~~~~e~~~l~~l~ 76 (291)
T cd06639 16 SLGDPTDTWEIIETIGKGT---------YGKVYKVTNKKDGSLA-AVKILDPISDV---------DEEIEAEYNILQSLP 76 (291)
T ss_pred cCCCCCCCeEEEEEeecCC---------CeEEEEEEECCCCCEE-EEEEecccccH---------HHHHHHHHHHHHHhc
Confidence 3334455677887775544 8999999999888877 77654211111 112456778877776
Q ss_pred cCCcccEEEEeeecC-----CeeEEeeccc-CcCHHHHHHhc---CCCCCHHHHHHHHHHHhc
Q psy16459 89 SNKGIPEVYYFGPCG-----KYNALVMELL-GPSLEDLFDLC---NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 89 ~~~~~P~l~~~G~~~-----~~~~iVM~Ll-G~sL~~l~~~~---~~~fs~~T~~~ia~q~l~ 142 (143)
+.++++++++..... ...|+|||.+ |.+|.++.+.. ++.++...+..++.|++.
T Consensus 77 ~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~ 139 (291)
T cd06639 77 NHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALL 139 (291)
T ss_pred CCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHH
Confidence 677899998887643 4689999988 67999876532 568999999999988764
No 56
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=98.04 E-value=4.8e-05 Score=60.39 Aligned_cols=100 Identities=18% Similarity=0.083 Sum_probs=72.5
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-C
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL-G 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll-G 114 (143)
+||.||++.+..++..+ |+|.=.. +. ............|..++......++++++++....+.+.|+|||.+ |
T Consensus 7 ~~g~Vy~~~~~~~~~~v-aiK~~~~--~~---~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 7 SFGKVFLAELKGTNQFF-AIKALKK--DV---VLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CCEEEEEEEECCCCCEE-EEEEEEH--HH---hhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 39999999999988877 7775321 10 0000111223446666666667789999999999999999999987 6
Q ss_pred cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 115 PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 115 ~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.+|.+..+.. +.++..++..++.|++.
T Consensus 81 g~L~~~l~~~-~~~~~~~~~~~~~qi~~ 107 (316)
T cd05619 81 GDLMFHIQSC-HKFDLPRATFYAAEIIC 107 (316)
T ss_pred CcHHHHHHHc-CCCCHHHHHHHHHHHHH
Confidence 7998876653 67999999999999864
No 57
>PHA03211 serine/threonine kinase US3; Provisional
Probab=98.04 E-value=5.7e-05 Score=63.84 Aligned_cols=102 Identities=15% Similarity=0.102 Sum_probs=80.7
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
.|.+.+.++.++ ||.||++.+..++..+ ++|.... .+...|+.++.++. .+++.+
T Consensus 170 gy~i~~~Lg~G~---------~G~Vy~a~~~~~~~~v-avK~~~~--------------~~~~~E~~iL~~L~-HpnIv~ 224 (461)
T PHA03211 170 GFAIHRALTPGS---------EGCVFESSHPDYPQRV-VVKAGWY--------------ASSVHEARLLRRLS-HPAVLA 224 (461)
T ss_pred CeEEEEEEccCC---------CeEEEEEEECCCCCEE-EEecccc--------------cCHHHHHHHHHHCC-CCCCCc
Confidence 466666665544 9999999999988877 8875321 13456888888775 468999
Q ss_pred EEEeeecCCeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++++..+...++||+.++.+|.+......+.++...+..++.|++.
T Consensus 225 l~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~ 271 (461)
T PHA03211 225 LLDVRVVGGLTCLVLPKYRSDLYTYLGARLRPLGLAQVTAVARQLLS 271 (461)
T ss_pred EEEEEEECCEEEEEEEccCCCHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999988876655568999999999999864
No 58
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=98.04 E-value=4.8e-05 Score=60.29 Aligned_cols=100 Identities=15% Similarity=-0.007 Sum_probs=71.3
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-C
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL-G 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll-G 114 (143)
+||.||++.+..+++.+ |+|.=.. +. ............|..++......++++++++....+.+.|+|||.+ |
T Consensus 7 ~~g~Vy~~~~~~~~~~v-aiK~~~~--~~---~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 7 SFGKVMLAELKGTNEFF-AIKALKK--DV---VLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CCeEEEEEEECCCCCEE-EEEEEEH--HH---hhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 49999999999888877 7775321 00 0000111223345555555556789999999999999999999998 6
Q ss_pred cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 115 PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 115 ~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.+|.+..+. .+.++...+..++.|++.
T Consensus 81 g~L~~~~~~-~~~~~~~~~~~~~~qi~~ 107 (316)
T cd05592 81 GDLMFHIQS-SGRFDEARARFYAAEIIC 107 (316)
T ss_pred CcHHHHHHH-cCCCCHHHHHHHHHHHHH
Confidence 788876654 467999999999999864
No 59
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=98.03 E-value=2.6e-05 Score=58.85 Aligned_cols=98 Identities=21% Similarity=0.193 Sum_probs=75.8
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccCc
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLGP 115 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG~ 115 (143)
+||.||++.+..+++.| |+|.-.....-.... .....|+.+..++ ..+++++++.....+.+.++||+.+..
T Consensus 11 ~~g~v~~~~~~~~~~~~-~~K~~~~~~~~~~~~------~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~~v~~~~~~ 82 (260)
T PF00069_consen 11 GFGTVYKAKNKKNGQKV-AVKIIDKSEIEEEER------EENIREIKILRRL-RHPNIVQILDVFQDDNYLYIVMEYCPG 82 (260)
T ss_dssp SSEEEEEEEETTTTEEE-EEEEEESTTHHHHHH------HHHHHHHHHHHHH-TBTTBCHEEEEEEESSEEEEEEEEETT
T ss_pred CCEEEEEEEECCCCeEE-EEEEecccccccccc------chhhhhhhccccc-ccccccccccccccccccccccccccc
Confidence 49999999999999988 666654321111111 1122388888888 667899999999999999999999998
Q ss_pred -CHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 116 -SLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 116 -sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+|.++... .+.++...+..++.|+++
T Consensus 83 ~~L~~~l~~-~~~~~~~~~~~~~~qi~~ 109 (260)
T PF00069_consen 83 GSLQDYLQK-NKPLSEEEILKIAYQILE 109 (260)
T ss_dssp EBHHHHHHH-HSSBBHHHHHHHHHHHHH
T ss_pred ccccccccc-cccccccccccccccccc
Confidence 99988763 488999999999999874
No 60
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=98.03 E-value=2.3e-05 Score=60.38 Aligned_cols=109 Identities=21% Similarity=0.231 Sum_probs=80.1
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEE
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEV 96 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l 96 (143)
+++.+.++..+ ||.||++.+..+++.+ ++|.-.... ........+..|+.++.++. .++++++
T Consensus 2 y~~~~~l~~g~---------~~~vy~~~~~~~g~~~-~~k~~~~~~------~~~~~~~~~~~ei~~l~~l~-h~~i~~~ 64 (284)
T cd07839 2 YEKLEKIGEGT---------YGTVFKAKNRETHEIV-ALKRVRLDD------DDEGVPSSALREICLLKELK-HKNIVRL 64 (284)
T ss_pred ceeEEEecccC---------CeEEEEEEECCCCcEE-EEEEeeccc------ccccCccchhHHHHHHHhcC-CCCeeeH
Confidence 45566664433 8999999999998877 665432110 00111234566888887774 4688899
Q ss_pred EEeeecCCeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 97 YYFGPCGKYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 97 ~~~G~~~~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++....+.+.|+|||.++.+|.+.+....+.++...+..++.|+++
T Consensus 65 ~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~ 110 (284)
T cd07839 65 YDVLHSDKKLTLVFEYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLK 110 (284)
T ss_pred HHHhccCCceEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 9998888999999999999998877665677999999999999864
No 61
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=98.03 E-value=7.2e-05 Score=57.48 Aligned_cols=108 Identities=17% Similarity=0.136 Sum_probs=79.4
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEE
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEV 96 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l 96 (143)
|++++.++..+ +|.||++.+..++..+ ++|.-..... .........|+.++.++. .++++++
T Consensus 2 y~~~~~l~~g~---------~~~v~~~~~~~~~~~~-~iK~~~~~~~-------~~~~~~~~~E~~~l~~l~-h~~i~~~ 63 (284)
T cd07836 2 FKQLEKLGEGT---------YATVYKGRNRTTGEIV-ALKEIHLDAE-------EGTPSTAIREISLMKELK-HENIVRL 63 (284)
T ss_pred ceEeeeeccCC---------ceEEEEEEECCCCeEE-EEEEeccccc-------ccchHHHHHHHHHHHhhc-CCCEeee
Confidence 56666665543 8999999998888877 7765322111 011123445888888774 5789999
Q ss_pred EEeeecCCeeEEeecccCcCHHHHHHhc--CCCCCHHHHHHHHHHHhc
Q psy16459 97 YYFGPCGKYNALVMELLGPSLEDLFDLC--NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 97 ~~~G~~~~~~~iVM~LlG~sL~~l~~~~--~~~fs~~T~~~ia~q~l~ 142 (143)
++....+...|+|||.++.+|.++.... ...++...+..++.|+++
T Consensus 64 ~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~ 111 (284)
T cd07836 64 HDVIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLK 111 (284)
T ss_pred eeeEeeCCcEEEEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHH
Confidence 9999999999999999999998876554 356899999999998764
No 62
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=98.03 E-value=1.7e-05 Score=60.48 Aligned_cols=111 Identities=16% Similarity=0.126 Sum_probs=82.1
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
++.+.+.++.++ ||.||++.+..++..+ +++.-.... +.. ......+..|..+..++...+++++
T Consensus 2 ~y~~~~~lg~g~---------~~~vy~~~~~~~~~~~-~ik~~~~~~-~~~----~~~~~~~~~e~~~~~~l~~~~~i~~ 66 (280)
T cd05581 2 DFKFGKIIGEGS---------FSTVVLAKEKETNKEY-AIKILDKRQ-LIK----EKKVKYVKIEKEVLTRLNGHPGIIK 66 (280)
T ss_pred CceEeeeecCCC---------ceEEEEEEEcCCCCEE-EEEEechHh-ccc----hHHHHHHHHHHHHHHhcccCCCchh
Confidence 466677776655 9999999999888877 776642110 000 0111245667777777765778999
Q ss_pred EEEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++....+...|+||+.+ |.+|.++.+.. +.++..++..++.|+++
T Consensus 67 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~ql~~ 113 (280)
T cd05581 67 LYYTFQDEENLYFVLEYAPNGELLQYIRKY-GSLDEKCTRFYAAEILL 113 (280)
T ss_pred HHHHhcCCceEEEEEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHH
Confidence 998888889999999999 99999887654 57999999999999864
No 63
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=98.03 E-value=9.8e-05 Score=55.84 Aligned_cols=98 Identities=16% Similarity=0.149 Sum_probs=71.7
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-C
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL-G 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll-G 114 (143)
.||.||++.+..+++.+ ++|.=.-..+ .+. ......|+.++.++ ..+++++++++...+...|+|||.+ |
T Consensus 7 ~~g~vy~~~~~~~~~~~-a~k~~~~~~~-~~~------~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~ 77 (252)
T cd05084 7 NFGEVFSGRLRADNTPV-AVKSCRETLP-PDL------KAKFLQEARILKQY-SHPNIVRLIGVCTQKQPIYIVMELVQG 77 (252)
T ss_pred cCccEEEEEEecCCceE-EEEecCccCC-HHH------HHHHHHHHHHHHhC-CCCCcceEEEEEcCCCCeEEEEeeccC
Confidence 48999999998888877 7774211000 111 11345677777666 4678999999999999999999987 6
Q ss_pred cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 115 PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 115 ~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.+|.+.....+..++..++..++.|+++
T Consensus 78 ~~L~~~~~~~~~~~~~~~~~~~~~qi~~ 105 (252)
T cd05084 78 GDFLTFLRTEGPRLKVKELIQMVENAAA 105 (252)
T ss_pred CcHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence 7898876554567899999999988764
No 64
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=98.03 E-value=9.3e-05 Score=57.33 Aligned_cols=109 Identities=13% Similarity=0.057 Sum_probs=79.5
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
.|.+++.++.++ ||.||.+.+..+++.+ ++|.-.... ..........|+.++..+ ..+++++
T Consensus 6 ~y~~~~~ig~g~---------~~~v~~~~~~~~~~~~-~iK~~~~~~-------~~~~~~~~~~e~~~l~~l-~h~ni~~ 67 (291)
T cd07870 6 SYLNLEKLGEGS---------YATVYKGISRINGQLV-ALKVISMKT-------EEGVPFTAIREASLLKGL-KHANIVL 67 (291)
T ss_pred eeEEEEEEEecC---------CEEEEEEEEcCCCcEE-EEEEecccC-------cCCCcHHHHHHHHHHHhc-CCCCEeE
Confidence 567777775543 8999999999998888 777642211 011122345688777776 4568999
Q ss_pred EEEeeecCCeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++++..+.+.|+|||.++.+|.+........++...+..++.|+++
T Consensus 68 ~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~ 114 (291)
T cd07870 68 LHDIIHTKETLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLR 114 (291)
T ss_pred EEEEEecCCeEEEEEecccCCHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999998888765444456788888888888754
No 65
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=98.02 E-value=0.00014 Score=57.86 Aligned_cols=110 Identities=18% Similarity=0.109 Sum_probs=82.2
Q ss_pred eeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcc
Q psy16459 14 KCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGI 93 (143)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~ 93 (143)
..+|++++.++.++ ||.||++.+..++..+ |+|.-..... ... ...+..|+.++.++. .+++
T Consensus 4 ~~~y~~~~~lg~G~---------~g~V~~~~~~~~~~~~-a~k~~~~~~~-~~~------~~~~~~E~~~l~~l~-h~~i 65 (331)
T cd06649 4 DDDFERISELGAGN---------GGVVTKVQHKPSGLIM-ARKLIHLEIK-PAI------RNQIIRELQVLHECN-SPYI 65 (331)
T ss_pred cccceEEEeecCCC---------CEEEEEEEECCCCcEE-EEEEeecccC-HHH------HHHHHHHHHHHHHCC-CCCC
Confidence 35788888887655 9999999999988877 7776532211 111 123567888887764 5689
Q ss_pred cEEEEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 94 PEVYYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 94 P~l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.+++++...+...++|||.+ |.+|.++.+.. +.++...+..++.|+++
T Consensus 66 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~ 114 (331)
T cd06649 66 VGFYGAFYSDGEISICMEHMDGGSLDQVLKEA-KRIPEEILGKVSIAVLR 114 (331)
T ss_pred CeEEEEEEECCEEEEEeecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHH
Confidence 99999988888999999988 46999887653 66888888888888753
No 66
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=98.02 E-value=6.1e-05 Score=58.50 Aligned_cols=110 Identities=21% Similarity=0.195 Sum_probs=76.7
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
.+++++.++.++ ||.||++.+..+++.+ |+|.-.....- .........|+.++.++. .+++.+
T Consensus 13 ~y~~~~~lg~g~---------~~~v~~~~~~~~~~~~-aik~~~~~~~~------~~~~~~~~~e~~~l~~l~-h~~iv~ 75 (310)
T cd07865 13 KYEKLAKIGQGT---------FGEVFKARHKKTKQIV-ALKKVLMENEK------EGFPITALREIKILQLLK-HENVVN 75 (310)
T ss_pred heEEEEEeecCC---------CEEEEEEEECCCCcEE-EEEEEeccCCc------CCchhHHHHHHHHHHhCC-CCCccc
Confidence 577788886544 8999999999988877 77764321100 001122345777777663 457777
Q ss_pred EEEeeecC--------CeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCG--------KYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~--------~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++..... ...|+|||.++.+|.++.......++..++..++.|+++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~ 130 (310)
T cd07865 76 LIEICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLN 130 (310)
T ss_pred eEEEEecccccccCCCceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHH
Confidence 77664433 345999999999998877655568999999999999864
No 67
>KOG0610|consensus
Probab=98.02 E-value=2.2e-05 Score=65.28 Aligned_cols=109 Identities=21% Similarity=0.166 Sum_probs=81.6
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEE-ecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCccc
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVL-SLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIP 94 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~-Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P 94 (143)
-|++++.++.++ -|.||.|.+.+++..| |||+ +- .++.. ++ +-...++|-.|+..+ .-|.+|
T Consensus 78 ~f~llk~LG~Gd---------iG~VyL~~l~~t~~~f-AmKVmdK--~~l~~-rk---Kl~Ra~tE~eIL~~l-DHPFlP 140 (459)
T KOG0610|consen 78 HFRLLKRLGCGD---------IGTVYLVELRGTNCLF-AMKVMDK--ESLAS-RK---KLKRAQTEREILSLL-DHPFLP 140 (459)
T ss_pred HHHHHHHcCCCC---------ceeEEEEEecCCCceE-EEEEecH--HHHhh-hh---HHHHHHHHHHHHHhc-CCCccc
Confidence 567788886654 7999999999999766 6654 31 11111 11 223467777777544 557899
Q ss_pred EEEEeeecCCeeEEeeccc-CcCHHHHHHhc-CCCCCHHHHHHHHHHHh
Q psy16459 95 EVYYFGPCGKYNALVMELL-GPSLEDLFDLC-NRKFTLKTVLMIAIQLE 141 (143)
Q Consensus 95 ~l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~-~~~fs~~T~~~ia~q~l 141 (143)
.+|..-..++|.++|||.+ |-+|..||+.. +++||...+--.|.+.+
T Consensus 141 TLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl 189 (459)
T KOG0610|consen 141 TLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVL 189 (459)
T ss_pred hhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHH
Confidence 9999999999999999998 57999999998 99999988876666543
No 68
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=98.02 E-value=4e-05 Score=59.18 Aligned_cols=110 Identities=15% Similarity=0.071 Sum_probs=78.7
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
.|++.+.++.++ ||.||++.+..++..+ |+|.-...... .........|+.++..+. .+++.+
T Consensus 2 ~y~~~~~lg~g~---------~~~v~~~~~~~~~~~~-avK~~~~~~~~------~~~~~~~~~E~~~l~~l~-h~~iv~ 64 (287)
T cd07848 2 KFEVLGVVGEGA---------YGVVLKCRHKETKEIV-AIKKFKDSEEN------EEVKETTLRELKMLRTLK-QENIVE 64 (287)
T ss_pred CceEEEEecccC---------CEEEEEEEECCCCcEE-EEEEEeccccc------ccchhhHHHHHHHHHhCC-Cccccc
Confidence 467777775544 9999999999988877 66643211100 011223556888777664 357778
Q ss_pred EEEeeecCCeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++....+.+.|+|||.+..++.+........++...+..++.|+++
T Consensus 65 ~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~ 111 (287)
T cd07848 65 LKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIK 111 (287)
T ss_pred hhhhEecCCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 88888888899999999988877666555677999999999998764
No 69
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=98.02 E-value=8e-05 Score=57.87 Aligned_cols=110 Identities=15% Similarity=0.083 Sum_probs=76.1
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEE
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEV 96 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l 96 (143)
|.+++.++.++ ||.||++.+..++..+ |+|.=.. ... ...........|+.++.++. .+++..+
T Consensus 2 f~~~~~lg~G~---------~g~V~~~~~~~~~~~~-avK~~~~----~~~-~~~~~~~~~~~E~~il~~l~-~~~iv~~ 65 (285)
T cd05631 2 FRHYRVLGKGG---------FGEVCACQVRATGKMY-ACKKLEK----KRI-KKRKGEAMALNEKRILEKVN-SRFVVSL 65 (285)
T ss_pred ceEEEEEecCC---------CEEEEEEEEecCCceE-EEEEeeH----hhh-hhhhhHHHHHHHHHHHHhcC-CCcEEEE
Confidence 34555564444 9999999999999888 7664210 000 11111123456888887764 4578888
Q ss_pred EEeeecCCeeEEeeccc-CcCHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 97 YYFGPCGKYNALVMELL-GPSLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 97 ~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
++....+.+.++||+.+ |.+|.+..... ...++...+..++.|+++
T Consensus 66 ~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~ 113 (285)
T cd05631 66 AYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCC 113 (285)
T ss_pred EEEEccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHH
Confidence 88888888999999988 46898776554 567999999999999764
No 70
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=98.02 E-value=8.5e-05 Score=59.18 Aligned_cols=111 Identities=15% Similarity=0.099 Sum_probs=81.3
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCccc
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIP 94 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P 94 (143)
.+|++.+.++.++ ||.||++.+..+++.+ |+|.-.. .+.. .......+..|+.++.++ ..+++.
T Consensus 18 ~~y~~~~~lg~G~---------~g~V~~~~~~~~~~~~-aiK~~~~----~~~~-~~~~~~~~~~E~~~l~~l-~hp~iv 81 (329)
T PTZ00263 18 SDFEMGETLGTGS---------FGRVRIAKHKGTGEYY-AIKCLKK----REIL-KMKQVQHVAQEKSILMEL-SHPFIV 81 (329)
T ss_pred hheEEEEEEEecC---------CeEEEEEEECCCCCEE-EEEEEEH----HHHh-hhhhHHHHHHHHHHHHhC-CCCCCC
Confidence 4788888886655 9999999999998877 7776421 1110 011123466788888776 456899
Q ss_pred EEEEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 95 EVYYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 95 ~l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++++....+.+.|+|||.+ |.+|.+..+. .+.++...+..++.|+++
T Consensus 82 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~ 129 (329)
T PTZ00263 82 NMMCSFQDENRVYFLLEFVVGGELFTHLRK-AGRFPNDVAKFYHAELVL 129 (329)
T ss_pred cEEEEEEcCCEEEEEEcCCCCChHHHHHHH-cCCCCHHHHHHHHHHHHH
Confidence 9999999999999999975 6788876654 467899998888888764
No 71
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=98.01 E-value=7.4e-05 Score=59.54 Aligned_cols=111 Identities=14% Similarity=0.082 Sum_probs=78.3
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
++++++.++.++ ||.||++.+..++..+ |+|.-.. .+... .........|..++..+ ..+.++.
T Consensus 2 ~y~~~~~lG~G~---------fg~V~~~~~~~~~~~~-aiK~~~~----~~~~~-~~~~~~~~~e~~~l~~~-~~~~i~~ 65 (332)
T cd05623 2 DFEILKVIGRGA---------FGEVAVVKLKNADKVF-AMKILNK----WEMLK-RAETACFREERDVLVNG-DNQWITT 65 (332)
T ss_pred CceEEEEEEeCC---------CeEEEEEEECCCCCEE-EEEEEeH----HHHHH-hhHHHHHHHHHHHHhhC-CCCCEee
Confidence 467777776655 9999999999888877 7776410 01100 01111244555555443 4467889
Q ss_pred EEEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++....+...|+|||++ |.+|.++.......++..++..++.|++.
T Consensus 66 ~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~ 113 (332)
T cd05623 66 LHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVI 113 (332)
T ss_pred EEEEEecCCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 999988899999999976 77999988766678999999988888764
No 72
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=98.00 E-value=6.8e-05 Score=59.44 Aligned_cols=100 Identities=18% Similarity=0.053 Sum_probs=72.7
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-C
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL-G 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll-G 114 (143)
+||.||++.+..+++.+ |+|.-... .. ...........|..++......++++++++....+.+.|+|||++ |
T Consensus 7 ~~g~V~~~~~~~~~~~~-avK~~~~~----~~-~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 7 SFGKVLLAELKGKGEYF-AVKALKKD----VV-LIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CCeEEEEEEECCCCCEE-EEEEEEHH----Hh-hhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 48999999999998877 77654210 00 001112234556777766667789999999999999999999988 4
Q ss_pred cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 115 PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 115 ~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.+|.+.... .+.++...+..++.|+++
T Consensus 81 g~L~~~i~~-~~~~~~~~~~~~~~qi~~ 107 (316)
T cd05620 81 GDLMFHIQD-KGRFDLYRATFYAAEIVC 107 (316)
T ss_pred CcHHHHHHH-cCCCCHHHHHHHHHHHHH
Confidence 588776544 467999999999998864
No 73
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=98.00 E-value=5.5e-05 Score=60.22 Aligned_cols=100 Identities=17% Similarity=-0.022 Sum_probs=74.8
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-C
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL-G 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll-G 114 (143)
+||.||+|.+..++..+ |+|.-..... ........+..|..++.++...+.++.++++.....+.|+|||++ |
T Consensus 7 ~~g~V~~~~~~~~~~~~-aiK~~~~~~~-----~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 7 SYAKVLLVRLKKNDQIY-AMKVVKKELV-----HDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CCeEEEEEEECCCCCEE-EEEEEEHHHh-----hhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 38999999999988877 7766421100 000111235678888888877788999999999999999999998 6
Q ss_pred cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 115 PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 115 ~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.+|.+.... .+.++...+..++.|++.
T Consensus 81 ~~L~~~~~~-~~~l~~~~~~~~~~qi~~ 107 (327)
T cd05617 81 GDLMFHMQR-QRKLPEEHARFYAAEICI 107 (327)
T ss_pred CcHHHHHHH-cCCCCHHHHHHHHHHHHH
Confidence 788876554 467999999999999764
No 74
>PHA02882 putative serine/threonine kinase; Provisional
Probab=98.00 E-value=7.9e-05 Score=58.33 Aligned_cols=120 Identities=13% Similarity=0.138 Sum_probs=75.4
Q ss_pred eeeeeeeeeeccCCCCCCCCceEEEccceeeccCCCC---CCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhh-
Q psy16459 12 LLKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPS---GGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQL- 87 (143)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~---~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql- 87 (143)
....+|.|.+.++.++ ||.||++.+.++ .... +++++..............+......++.....+
T Consensus 9 i~~~~y~i~~~LG~G~---------fG~Vy~~~~~~~~~~~~~~-~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~ 78 (294)
T PHA02882 9 ITGKEWKIDKLIGCGG---------FGCVYETQCASDHCINNQA-VAKIENLENETIVMETLVYNNIYDIDKIALWKNIH 78 (294)
T ss_pred cCCCceEEeeEEecCC---------CceEEEEEEcCCcccccce-EEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhc
Confidence 4446899999997766 999999998777 4444 7777643221110000000000001112222222
Q ss_pred -hcCCcccEEEEeeecCC----eeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 88 -QSNKGIPEVYYFGPCGK----YNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 88 -~~~~~~P~l~~~G~~~~----~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
...+++|.++++|.... +.|++|+.++.++.++++.. ..++...+..++.|+++
T Consensus 79 ~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~qi~~ 137 (294)
T PHA02882 79 NIDHLGIPKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRI-KCKNKKLIKNIMKDMLT 137 (294)
T ss_pred cCCCCCCCcEEEeeeEecCCceEEEEEEehhccCHHHHHHhh-ccCCHHHHHHHHHHHHH
Confidence 23357899999887653 78999999999999887754 55788888889988764
No 75
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=98.00 E-value=9.8e-05 Score=56.17 Aligned_cols=106 Identities=11% Similarity=0.033 Sum_probs=75.5
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
++++.+.++.++ ||.||++.+.. ++.+ ++|.-.-+... ......|+.++.++. .+++++
T Consensus 5 ~~~~~~~lg~G~---------~~~v~~~~~~~-~~~~-~iK~~~~~~~~---------~~~~~~e~~~l~~l~-~~~i~~ 63 (256)
T cd05059 5 ELTFLKELGSGQ---------FGVVHLGKWRG-KIDV-AIKMIREGAMS---------EDDFIEEAKVMMKLS-HPNLVQ 63 (256)
T ss_pred HcchhhhhccCC---------CceEEEeEecC-CccE-EEEEeccCCCC---------HHHHHHHHHHHHhCC-CCCEEE
Confidence 456666665543 89999998753 4445 78764211100 112345777777764 568999
Q ss_pred EEEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++++...+.+.|+|||.+ |.+|.+........++..++..++.|++.
T Consensus 64 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~ 111 (256)
T cd05059 64 LYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCE 111 (256)
T ss_pred EEEEEcCCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHH
Confidence 999999889999999998 78999887655558999999999988753
No 76
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=98.00 E-value=5.6e-05 Score=58.29 Aligned_cols=110 Identities=16% Similarity=0.135 Sum_probs=77.7
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhh--cCCccc
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQ--SNKGIP 94 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~--~~~~~P 94 (143)
|++++.++.++ ||.||++.+..++..+ |+|.-.... ...+.......|+.++..+. +-+++.
T Consensus 2 y~~~~~lg~g~---------~g~v~~~~~~~~~~~~-aiK~~~~~~------~~~~~~~~~~~e~~~l~~l~~~~h~ni~ 65 (288)
T cd07863 2 YEPVAEIGVGA---------YGTVYKARDPHSGHFV-ALKSVRVQT------NEDGLPLSTVREVALLKRLEAFDHPNIV 65 (288)
T ss_pred ceEeeEEeecC---------CeEEEEEEECCCCcEE-EEEEeccCc------CCCCCchHHHHHHHHHHHhhhcCCCCee
Confidence 56777775544 9999999999998877 777532110 00111223456777777665 346788
Q ss_pred EEEEeeec-----CCeeEEeecccCcCHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 95 EVYYFGPC-----GKYNALVMELLGPSLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 95 ~l~~~G~~-----~~~~~iVM~LlG~sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
+++++... +.+.++||+.++.+|.++.... ...++...+..++.|++.
T Consensus 66 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~ 119 (288)
T cd07863 66 RLMDVCATSRTDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLR 119 (288)
T ss_pred eeeeeeccccCCCCceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence 88877643 3467999999999998887765 567999999999999764
No 77
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=97.99 E-value=7.8e-05 Score=57.48 Aligned_cols=91 Identities=24% Similarity=0.217 Sum_probs=68.5
Q ss_pred ccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-Cc
Q psy16459 37 FGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL-GP 115 (143)
Q Consensus 37 fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll-G~ 115 (143)
||.||.+.+..++..| +++.-.. . .....|..+...+...++++++++....+.+.|+|||.+ |.
T Consensus 29 ~g~v~~~~~~~~~~~~-~~k~~~~--------~-----~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~ 94 (267)
T PHA03390 29 FGKVSVLKHKPTQKLF-VQKIIKA--------K-----NFNAIEPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDG 94 (267)
T ss_pred ceEEEEEEEcCCCcEE-EEEEEeh--------h-----hcchhhHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCC
Confidence 9999999999998877 7766421 0 001123333333445789999999999999999999998 78
Q ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 116 SLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 116 sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+|.++.+.. +.++...+..++.|+++
T Consensus 95 ~L~~~l~~~-~~l~~~~~~~~~~qi~~ 120 (267)
T PHA03390 95 DLFDLLKKE-GKLSEAEVKKIIRQLVE 120 (267)
T ss_pred cHHHHHHhc-CCCCHHHHHHHHHHHHH
Confidence 999876654 58999999999999864
No 78
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=97.98 E-value=2.4e-05 Score=61.07 Aligned_cols=110 Identities=15% Similarity=0.178 Sum_probs=78.7
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
+|++.+.++.++ ||.||++.+..+++.+ |+|.-.. .+... ......+..|+.++.++. .+++.+
T Consensus 2 ~y~~~~~lg~G~---------~g~Vy~~~~~~~~~~~-aiK~~~~----~~~~~-~~~~~~~~~E~~~l~~l~-hp~iv~ 65 (291)
T cd05612 2 DLERIKTVGTGT---------FGRVHLVRDRISEHYY-ALKVMAI----PEVIR-LKQEQHVHNEKRVLKEVS-HPFIIR 65 (291)
T ss_pred CceeeeeeecCC---------CeEEEEEEEcCCCCEE-EEEEEEH----HHHhh-hHHHHHHHHHHHHHHhCC-CCcHhh
Confidence 456677775544 9999999999998877 7775321 11100 011223567888877764 468888
Q ss_pred EEEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++....+.+.|+|||.+ |.+|.++.+. .+.++...+..++.|+++
T Consensus 66 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~ 112 (291)
T cd05612 66 LFWTEHDQRFLYMLMEYVPGGELFSYLRN-SGRFSNSTGLFYASEIVC 112 (291)
T ss_pred hHhhhccCCeEEEEEeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHH
Confidence 999888899999999976 5789887654 367999999999998764
No 79
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=97.98 E-value=0.0002 Score=56.37 Aligned_cols=108 Identities=19% Similarity=0.124 Sum_probs=80.3
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
+|++.+.++.++ ||.||++.+..++..+ +++.-....+ .+. ...+..|+.++.++ +-+++.+
T Consensus 2 ~~~~~~~lg~G~---------~g~v~~~~~~~~~~~~-a~k~~~~~~~-~~~------~~~~~~E~~~l~~l-~h~~iv~ 63 (308)
T cd06615 2 DFEKLGELGAGN---------GGVVTKVLHRPSGLIM-ARKLIHLEIK-PAI------RNQIIRELKVLHEC-NSPYIVG 63 (308)
T ss_pred CceEEeeccCCC---------CeEEEEEEEcCCCeEE-EEEEeccccC-HHH------HHHHHHHHHHHHhC-CCCCCCe
Confidence 577777776655 9999999999888876 7766432111 111 11245688888877 4468999
Q ss_pred EEEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++....+.+.|+|||.+ |.+|.++.+.. +.++...+..++.|+++
T Consensus 64 ~~~~~~~~~~~~lv~ey~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~ 110 (308)
T cd06615 64 FYGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPENILGKISIAVLR 110 (308)
T ss_pred EEEEEeeCCEEEEEeeccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHH
Confidence 999988899999999987 67999887654 77899999999888754
No 80
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=97.98 E-value=6.5e-05 Score=58.46 Aligned_cols=99 Identities=15% Similarity=0.073 Sum_probs=70.7
Q ss_pred ccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-Cc
Q psy16459 37 FGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL-GP 115 (143)
Q Consensus 37 fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll-G~ 115 (143)
||.||++.+..++..| |+|.-.. +. . ...........|+.++.++. .+.+..+++....+.+.++||+.+ |.
T Consensus 13 ~g~v~~~~~~~~~~~~-avK~~~~--~~--~-~~~~~~~~~~~E~~il~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~g~ 85 (285)
T cd05630 13 FGEVCACQVRATGKMY-ACKKLEK--KR--I-KKRKGESMALNEKQILEKVN-SRFVVSLAYAYETKDALCLVLTLMNGG 85 (285)
T ss_pred CeEEEEEEEcCCCceE-EEEEEeh--hh--c-cchHHHHHHHHHHHHHHhCC-CCCeeeeeEEEecCCEEEEEEEecCCC
Confidence 9999999999999888 7664211 00 0 00000112345888877664 457778888888888999999987 68
Q ss_pred CHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 116 SLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 116 sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
+|.+..... ...++..++..++.|++.
T Consensus 86 ~L~~~l~~~~~~~l~~~~~~~~~~qi~~ 113 (285)
T cd05630 86 DLKFHIYHMGEAGFEEGRAVFYAAEICC 113 (285)
T ss_pred cHHHHHHHhcccCCCHHHHHHHHHHHHH
Confidence 999877655 567999999999999764
No 81
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=97.98 E-value=0.00018 Score=54.49 Aligned_cols=109 Identities=14% Similarity=0.088 Sum_probs=78.0
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEE
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEV 96 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l 96 (143)
|++++.++..+ ||.+|.+.+..++..+ +++.-... .... ........|+.++.++. .++++++
T Consensus 2 y~~~~~lg~g~---------~g~~~~~~~~~~~~~~-~ik~~~~~-~~~~-----~~~~~~~~e~~~l~~l~-~~~i~~~ 64 (256)
T cd08218 2 YVKVKKIGEGS---------FGKAILVKSKEDGKQY-VIKEINIS-KMSP-----KEREESRKEVAVLSNMK-HPNIVQY 64 (256)
T ss_pred ceEEEEeccCC---------ceEEEEEEEcCCCCEE-EEEEEEhH-hCCh-----HHHHHHHHHHHHHHhCC-CCCeeee
Confidence 55666665544 8999999999888877 66643210 0000 01124566777777664 4689999
Q ss_pred EEeeecCCeeEEeeccc-CcCHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 97 YYFGPCGKYNALVMELL-GPSLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 97 ~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
++....+.+.|+|||.+ |.+|.+..... ...++..++..++.|+++
T Consensus 65 ~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 112 (256)
T cd08218 65 QESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICL 112 (256)
T ss_pred EeeecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHH
Confidence 99998999999999987 78998877665 557899999999888764
No 82
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=97.98 E-value=9e-05 Score=57.07 Aligned_cols=110 Identities=16% Similarity=0.139 Sum_probs=80.3
Q ss_pred eeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcc
Q psy16459 14 KCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGI 93 (143)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~ 93 (143)
.+.+++...++.++ ||.||++.+..++..+ ++|...... .....+..|+.++..+...+++
T Consensus 15 ~~~~~~~~~lg~g~---------~~~v~~~~~~~~~~~~-a~K~~~~~~---------~~~~~~~~e~~~l~~~~~h~~i 75 (282)
T cd06636 15 AGIFELVEVVGNGT---------YGQVYKGRHVKTGQLA-AIKVMDVTE---------DEEEEIKLEINMLKKYSHHRNI 75 (282)
T ss_pred hhhhhhheeeccCC---------CeEEEEEEEcCCCcEE-EEEEEecCh---------HHHHHHHHHHHHHHHhcCCCcE
Confidence 35677777775544 9999999999888877 777643211 0122466788888888777889
Q ss_pred cEEEEeee------cCCeeEEeecccCc-CHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 94 PEVYYFGP------CGKYNALVMELLGP-SLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 94 P~l~~~G~------~~~~~~iVM~LlG~-sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
.+++++.. .+.+.|+|||.++. +|.++.... +..++...+..++.|+++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~ 132 (282)
T cd06636 76 ATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILR 132 (282)
T ss_pred EEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHH
Confidence 99888874 24688999999976 899988765 566888888888877654
No 83
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=97.97 E-value=0.00017 Score=54.32 Aligned_cols=108 Identities=18% Similarity=0.107 Sum_probs=78.5
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCC-CCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLG-PSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg-~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
|+++..++..+ ||.||.+.+..+++.+ +++.-... .+... ...+..|+.++.++. .+++++
T Consensus 2 y~~~~~lg~g~---------~~~v~~~~~~~~~~~~-~ik~~~~~~~~~~~-------~~~~~~e~~~l~~~~-~~~i~~ 63 (256)
T cd08220 2 YEKIRVVGRGA---------FGIVHLCRRKADQKLV-IIKQIPVEQMTKDE-------RLAAQNECQVLKLLS-HPNIIE 63 (256)
T ss_pred ceEEEEecccC---------ceEEEEEEEcCCCcEE-EEEEEeccccccHH-------HHHHHHHHHHHhhCC-CCchhh
Confidence 45566665544 8999999999888877 66654221 11111 123667888877764 467888
Q ss_pred EEEeeecCCeeEEeeccc-CcCHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELL-GPSLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
+++....+.+.++|||.+ |.+|.++.... +..++...+..++.|+++
T Consensus 64 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~ 112 (256)
T cd08220 64 YYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILL 112 (256)
T ss_pred eeeeEecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHH
Confidence 888888889999999999 67999987765 566899999999888764
No 84
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=97.96 E-value=9.5e-05 Score=60.11 Aligned_cols=110 Identities=19% Similarity=0.115 Sum_probs=78.5
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCccc
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIP 94 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P 94 (143)
.+|++.+.++.++ ||.||++.+..+++.| |+|.-.. .+... ......+..|+.++..+ ..++++
T Consensus 43 ~~y~~~~~lg~G~---------~g~Vy~~~~~~~~~~~-aiK~~~~----~~~~~-~~~~~~~~~e~~il~~~-~h~~iv 106 (370)
T cd05596 43 EDFDVIKVIGRGA---------FGEVQLVRHKSSKQVY-AMKLLSK----FEMIK-RSDSAFFWEERDIMAHA-NSEWIV 106 (370)
T ss_pred HHcEEEEEEeeCC---------CEEEEEEEECCCCCEE-EEEEEEH----HHhhh-hhhHHHHHHHHHHHHhC-CCCCcc
Confidence 3678888886544 9999999999998887 7776420 01100 11112245566666554 457899
Q ss_pred EEEEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 95 EVYYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 95 ~l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++++...+.+.|+|||++ |.+|.++... ..++...+..++.|++.
T Consensus 107 ~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~--~~l~~~~~~~~~~qi~~ 153 (370)
T cd05596 107 QLHYAFQDDKYLYMVMEYMPGGDLVNLMSN--YDIPEKWARFYTAEVVL 153 (370)
T ss_pred eEEEEEecCCEEEEEEcCCCCCcHHHHHHh--cCCCHHHHHHHHHHHHH
Confidence 9999999999999999998 6789887653 56888888888888754
No 85
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=97.96 E-value=0.0001 Score=56.98 Aligned_cols=107 Identities=16% Similarity=0.131 Sum_probs=79.5
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
++++++.++..+ ||.||.+.+..++..+ |+|.-....... . ...+..|+.++..+ ..+++++
T Consensus 6 ~~~~~~~ig~g~---------~g~v~~~~~~~~~~~~-a~k~~~~~~~~~-~------~~~~~~E~~~l~~l-~h~~i~~ 67 (284)
T cd06620 6 DLETISDLGAGN---------GGSVSKVKHIPTGTVM-AKKVVHIGAKSS-V------RKQILRELQIMHEC-RSPYIVS 67 (284)
T ss_pred HHHHHHHcCCCC---------CeEEEEEEEcCCCcEE-EEEEEEecCcch-H------HHHHHHHHHHHHHc-CCCCcce
Confidence 567777776554 9999999998888877 777654322111 1 12356788887766 4679999
Q ss_pred EEEeeecCCeeEEeecccC-cCHHHHHHhcCCCCCHHHHHHHHHHHh
Q psy16459 96 VYYFGPCGKYNALVMELLG-PSLEDLFDLCNRKFTLKTVLMIAIQLE 141 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~LlG-~sL~~l~~~~~~~fs~~T~~~ia~q~l 141 (143)
+++....+.+.|+|||.+. .+|.++... .+.++...+..++.|++
T Consensus 68 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~ 113 (284)
T cd06620 68 FYGAFLNENNICMCMEFMDCGSLDRIYKK-GGPIPVEILGKIAVAVV 113 (284)
T ss_pred EeeeEecCCEEEEEEecCCCCCHHHHHHh-ccCCCHHHHHHHHHHHH
Confidence 9999999999999999995 588887654 36789999988888875
No 86
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=97.96 E-value=9.6e-05 Score=56.38 Aligned_cols=107 Identities=15% Similarity=0.194 Sum_probs=78.8
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
++.+.+.++..+ ||.||.+.+..++..+ ++|.-..... .+ ......|+.++..+ .-+++.+
T Consensus 10 ~~~~~~~lg~g~---------~~~v~~~~~~~~~~~~-~ik~~~~~~~-~~-------~~~~~~e~~~~~~l-~h~~ii~ 70 (267)
T cd06645 10 DFELIQRIGSGT---------YGDVYKARNVNTGELA-AIKVIKLEPG-ED-------FAVVQQEIIMMKDC-KHSNIVA 70 (267)
T ss_pred HHHHHHHhCCCC---------CeEEEEEEEcCCCcEE-EEEEEecCch-hH-------HHHHHHHHHHHHhC-CCCCeee
Confidence 567777775544 9999999999988887 7776432111 00 01234566666555 4568999
Q ss_pred EEEeeecCCeeEEeecccC-cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELLG-PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~LlG-~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++....+.+.|+|||.++ .+|.++.+.. +.++..++..++.|++.
T Consensus 71 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~ 117 (267)
T cd06645 71 YFGSYLRRDKLWICMEFCGGGSLQDIYHVT-GPLSESQIAYVSRETLQ 117 (267)
T ss_pred EEEEEEeCCEEEEEEeccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHH
Confidence 9999999999999999996 5999986653 67999999999999864
No 87
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=97.96 E-value=0.00012 Score=56.38 Aligned_cols=105 Identities=17% Similarity=0.148 Sum_probs=75.6
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEE
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEV 96 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l 96 (143)
+++++.++.++ ||.||.+.+..++..+ ++|.-....+-.. ...+..|+.++.++ ..++++++
T Consensus 6 y~~~~~lg~g~---------~~~vy~~~~~~~~~~v-aiK~~~~~~~~~~-------~~~~~~e~~~l~~l-~h~~i~~~ 67 (277)
T cd06640 6 FTKLERIGKGS---------FGEVFKGIDNRTQQVV-AIKIIDLEEAEDE-------IEDIQQEITVLSQC-DSPYVTKY 67 (277)
T ss_pred hhhhhhcccCC---------CeEEEEEEEccCCEEE-EEEEEeccccHHH-------HHHHHHHHHHHHhC-CCCCEeeE
Confidence 44556665544 8999999999888877 7776432111111 12356677777666 45689999
Q ss_pred EEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHh
Q psy16459 97 YYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLE 141 (143)
Q Consensus 97 ~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l 141 (143)
++++..+.+.|+|||.+ |.+|.++.+ .+.++...+..++.|++
T Consensus 68 ~~~~~~~~~~~lv~e~~~~~~L~~~i~--~~~l~~~~~~~~~~~l~ 111 (277)
T cd06640 68 YGSYLKGTKLWIIMEYLGGGSALDLLR--AGPFDEFQIATMLKEIL 111 (277)
T ss_pred EEEEEECCEEEEEEecCCCCcHHHHHh--cCCCCHHHHHHHHHHHH
Confidence 99999999999999988 568888654 35688888888888765
No 88
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=97.95 E-value=0.00024 Score=54.22 Aligned_cols=110 Identities=18% Similarity=0.163 Sum_probs=77.6
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCC--ceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcc
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGG--GYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGI 93 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~--~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~ 93 (143)
.|++...++.++ ||.||++.+..+++ ...++|....+..-.. ......|+.++.++. .+++
T Consensus 5 ~~~~~~~lg~g~---------~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~-------~~~~~~e~~~l~~l~-h~~i 67 (266)
T cd05033 5 YVTIEKVIGGGE---------FGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQ-------RLDFLTEASIMGQFD-HPNI 67 (266)
T ss_pred HceeeeEecCCc---------cceEEEEEEccCCCCcceEEEEEcCCCCChHH-------HHHHHHHHHHHHhCC-CCCc
Confidence 456666665544 99999998765532 3447776533221111 112455777776664 5689
Q ss_pred cEEEEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 94 PEVYYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 94 P~l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++++....+...++|||.+ |.+|.+......+.|+...+..++.|+++
T Consensus 68 ~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~ 117 (266)
T cd05033 68 IRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIAS 117 (266)
T ss_pred ceEeEEEecCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHH
Confidence 99999999999999999988 67999987665568999999999988764
No 89
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=97.95 E-value=8e-05 Score=59.33 Aligned_cols=100 Identities=13% Similarity=-0.010 Sum_probs=74.2
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-C
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL-G 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll-G 114 (143)
.||.||.+.+..++..| |+|.=.. + ..........+..|..++..+...++++.++++...+...|+|||.+ |
T Consensus 7 ~~g~V~~~~~~~~~~~~-aiK~i~~--~---~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 7 SYAKVLLVELKKTRRIY-AMKVIKK--E---LVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CCeEEEEEEECCCCCEE-EEEEEEH--H---HhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 38999999999998888 7765321 0 00000111235678888888877889999999999999999999988 5
Q ss_pred cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 115 PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 115 ~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.+|.+.... .+.++...+..++.|++.
T Consensus 81 g~L~~~~~~-~~~l~~~~~~~~~~qi~~ 107 (329)
T cd05588 81 GDLMFHMQR-QRKLPEEHARFYSAEISL 107 (329)
T ss_pred CCHHHHHHH-cCCCCHHHHHHHHHHHHH
Confidence 688776543 478999999999998764
No 90
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=97.94 E-value=0.00012 Score=57.45 Aligned_cols=110 Identities=22% Similarity=0.154 Sum_probs=78.7
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
+|++.+.++.++ ||.||++.+..+++.+ |+|.-..... ..........|+.++.++.. +++.+
T Consensus 8 ~y~~~~~ig~g~---------~~~v~~~~~~~~~~~v-aiK~~~~~~~------~~~~~~~~~~E~~~l~~l~h-~~i~~ 70 (309)
T cd07845 8 EFEKLNRIGEGT---------YGIVYRARDTTSGEIV-ALKKVRMDNE------RDGIPISSLREITLLLNLRH-PNIVE 70 (309)
T ss_pred ceeEeeeeeecC---------CEEEEEEEECCCCcEE-EEEEEEeccC------CCCCcchhhHHHHHHHhCCC-CCCcc
Confidence 577777775544 8999999999988888 7765422110 00112234568888887754 56777
Q ss_pred EEEeeec--CCeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPC--GKYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~--~~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++.-.. ....|+|||.++.+|.++.....+.++...+..++.|+++
T Consensus 71 ~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~ 119 (309)
T cd07845 71 LKEVVVGKHLDSIFLVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLR 119 (309)
T ss_pred eEEEEecCCCCeEEEEEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHH
Confidence 7776543 3578999999999999887766678999999999999864
No 91
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=97.93 E-value=0.00015 Score=55.18 Aligned_cols=107 Identities=17% Similarity=0.116 Sum_probs=78.9
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCccc
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIP 94 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P 94 (143)
..+.+.+.++..+ ||.||++.+..+ +.+ ++|.-..+.. .......|+.++.++. .++++
T Consensus 6 ~~~~~~~~lg~g~---------~~~v~~~~~~~~-~~v-~iK~~~~~~~---------~~~~~~~e~~~l~~l~-h~~i~ 64 (261)
T cd05068 6 TSIQLLRKLGAGQ---------FGEVWEGLWNNT-TPV-AVKTLKPGTM---------DPKDFLAEAQIMKKLR-HPKLI 64 (261)
T ss_pred hheeeEEEecccC---------CccEEEEEecCC-eEE-EEEeeCCCcc---------cHHHHHHHHHHHHHCC-CCCcc
Confidence 3567777776655 899999887543 344 7776432111 0112456788887775 46889
Q ss_pred EEEEeeecCCeeEEeeccc-CcCHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 95 EVYYFGPCGKYNALVMELL-GPSLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 95 ~l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
+++.+...+...|+||+.+ |.+|.+..... +..++..++..++.|+++
T Consensus 65 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~ 114 (261)
T cd05068 65 QLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVAS 114 (261)
T ss_pred ceeEEEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHH
Confidence 9999988889999999999 89999987766 578999999999998864
No 92
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=97.93 E-value=0.00013 Score=55.12 Aligned_cols=109 Identities=16% Similarity=0.150 Sum_probs=81.0
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCccc
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIP 94 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P 94 (143)
.+|++.+.++..+ ||.||+|.+..+++.+ +++.-..... + ....+..|+.++.++ ..+++.
T Consensus 3 ~~~~~~~~l~~g~---------~~~v~~~~~~~~~~~~-~ik~~~~~~~--~------~~~~~~~e~~~l~~~-~h~~i~ 63 (262)
T cd06613 3 EDYELIQRIGSGT---------YGDVYKARDIATGELV-AIKVIKLEPG--D------DFEIIQQEISMLKEC-RHPNIV 63 (262)
T ss_pred cceEEEEEecCCC---------ceEEEEeEecCCCCEE-EEEEEEcCch--h------hHHHHHHHHHHHHhC-CCCChh
Confidence 3677777776544 9999999998888776 7776543211 1 112356677777666 456888
Q ss_pred EEEEeeecCCeeEEeecccC-cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 95 EVYYFGPCGKYNALVMELLG-PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 95 ~l~~~G~~~~~~~iVM~LlG-~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++++....+...|++|+.++ .+|.++.+.....++..++..++.|+++
T Consensus 64 ~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~ 112 (262)
T cd06613 64 AYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLK 112 (262)
T ss_pred ceEEEEEeCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHH
Confidence 99999888899999999987 5898887665578999999999988764
No 93
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=97.92 E-value=0.00028 Score=52.80 Aligned_cols=108 Identities=22% Similarity=0.162 Sum_probs=78.3
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
|.+.+.++..+ ||.||.+.+..++..+ +++.-.. ...-.+ ...+..|+.++.++. .+++++
T Consensus 2 y~~~~~l~~g~---------~~~v~~~~~~~~~~~~-~ik~~~~~~~~~~~-------~~~~~~e~~~l~~l~-~~~~~~ 63 (258)
T cd08215 2 YEIIKQIGKGS---------FGKVYLVRRKSDGKLY-VLKEIDLSNMSEKE-------REDALNEVKILKKLN-HPNIIK 63 (258)
T ss_pred ceEEeeeccCC---------CeEEEEEEEcCCCcEE-EEEEeecccCChHH-------HHHHHHHHHHHHhcC-CCChhh
Confidence 45566664433 8999999999888887 5554322 111011 123566777777765 678999
Q ss_pred EEEeeecCCeeEEeeccc-CcCHHHHHHhc---CCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELL-GPSLEDLFDLC---NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~---~~~fs~~T~~~ia~q~l~ 142 (143)
+++....+.+.++|||.+ |.+|.+..+.. +..++..++..++.|+++
T Consensus 64 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~ 114 (258)
T cd08215 64 YYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCL 114 (258)
T ss_pred eEEEEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHH
Confidence 999988889999999988 46999877654 478999999999999864
No 94
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=97.92 E-value=8e-05 Score=56.53 Aligned_cols=108 Identities=17% Similarity=0.187 Sum_probs=79.5
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCccc
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIP 94 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P 94 (143)
.+|++.+.++.++ ||.||++.+.. +..+ ++|.-... .... ...+..|+.++..+ ..+++.
T Consensus 6 ~~y~~~~~ig~g~---------~~~vy~~~~~~-~~~~-~~k~~~~~-~~~~-------~~~~~~e~~~l~~l-~~~~i~ 65 (261)
T cd05148 6 EEFTLERKLGSGY---------FGEVWEGLWKN-RVRV-AIKILKSD-DLLK-------QQDFQKEVQALKRL-RHKHLI 65 (261)
T ss_pred HHHHHhhhhccCC---------CccEEEeEecC-CCcE-EEEecccc-chhh-------HHHHHHHHHHHhcC-CCcchh
Confidence 3677777776644 99999999988 5545 77664221 1100 11356677777666 457899
Q ss_pred EEEEeeecCCeeEEeecccC-cCHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 95 EVYYFGPCGKYNALVMELLG-PSLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 95 ~l~~~G~~~~~~~iVM~LlG-~sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
+++++...+.+.++||+.+. .+|.++.+.. ++.++...+..++.|+++
T Consensus 66 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~ 115 (261)
T cd05148 66 SLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAE 115 (261)
T ss_pred heeeeEecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999884 5999988766 678999999999988864
No 95
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=97.92 E-value=8.4e-05 Score=56.68 Aligned_cols=107 Identities=14% Similarity=0.175 Sum_probs=77.7
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
++++.+.++..+ ||.||++.+..++..+ ++|.-..... .+ .-....|+.++.++ .-+++++
T Consensus 10 ~y~~~~~lg~g~---------~g~vy~~~~~~~~~~~-aik~~~~~~~-~~-------~~~~~~e~~~l~~~-~h~~ii~ 70 (267)
T cd06646 10 DYELIQRVGSGT---------YGDVYKARNLHTGELA-AVKIIKLEPG-DD-------FSLIQQEIFMVKEC-KHCNIVA 70 (267)
T ss_pred hcchhheeecCC---------CeEEEEEEECCCCeEE-EEEEEecCcc-ch-------HHHHHHHHHHHHhc-CCCCeee
Confidence 577777775544 9999999998888877 7776532111 00 11245677776655 3458889
Q ss_pred EEEeeecCCeeEEeecccC-cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELLG-PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~LlG-~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++....+...|+|||.++ .+|.++... .+.++..++..++.|+++
T Consensus 71 ~~~~~~~~~~~~iv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~ 117 (267)
T cd06646 71 YFGSYLSREKLWICMEYCGGGSLQDIYHV-TGPLSELQIAYVCRETLQ 117 (267)
T ss_pred eeEEEEeCCEEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHH
Confidence 9999888899999999987 589887654 367899999999988764
No 96
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=97.91 E-value=0.00011 Score=58.28 Aligned_cols=100 Identities=15% Similarity=-0.017 Sum_probs=72.6
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-C
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL-G 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll-G 114 (143)
.||.||+|.+..++..| |+|.-.. + .. ...........|..++..+...+++++++++.....+.|+|||.+ |
T Consensus 7 ~~g~V~~~~~~~~~~~~-aiK~~~~--~--~~-~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 7 SFGKVLLAELKGTDELY-AVKVLKK--D--VI-LQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CCeEEEEEEECCCCCEE-EEEEEEH--H--HH-hhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 48999999999988887 7775321 0 00 001112234567777766666779999999988889999999998 6
Q ss_pred cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 115 PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 115 ~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.+|.+.... .+.++...+..++.|+++
T Consensus 81 ~~L~~~~~~-~~~l~~~~~~~~~~qi~~ 107 (318)
T cd05570 81 GDLMFHIQR-SGRFDEPRARFYAAEIVL 107 (318)
T ss_pred CCHHHHHHH-cCCCCHHHHHHHHHHHHH
Confidence 788776554 368999999999999864
No 97
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=97.91 E-value=8.4e-05 Score=60.51 Aligned_cols=111 Identities=15% Similarity=0.108 Sum_probs=78.9
Q ss_pred eeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcc
Q psy16459 14 KCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGI 93 (143)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~ 93 (143)
..++++.+.++.++ ||.||++.+..++..+ |+|.-.. .+... ......+..|..++.. ...+++
T Consensus 42 ~~~y~i~~~lG~G~---------fg~Vy~~~~~~~~~~~-aiK~i~~----~~~~~-~~~~~~~~~e~~i~~~-~~hp~i 105 (371)
T cd05622 42 AEDYEVVKVIGRGA---------FGEVQLVRHKSTRKVY-AMKLLSK----FEMIK-RSDSAFFWEERDIMAF-ANSPWV 105 (371)
T ss_pred hhhcEEEEEEeecC---------CeEEEEEEECCCCcEE-EEEEEEH----HHhhh-hHHHHHHHHHHHHHHh-CCCCCC
Confidence 35788888886655 9999999999999988 7766311 00000 0001123445555544 356789
Q ss_pred cEEEEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 94 PEVYYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 94 P~l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++++.....+.+.|+|||++ |.+|.++.+. ..++...+..++.|++.
T Consensus 106 v~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~~--~~~~~~~~~~~~~qi~~ 153 (371)
T cd05622 106 VQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN--YDVPEKWARFYTAEVVL 153 (371)
T ss_pred CeEEEEEEcCCEEEEEEcCCCCCcHHHHHHh--cCCCHHHHHHHHHHHHH
Confidence 99999999999999999998 6899988654 46888888888888764
No 98
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=97.91 E-value=0.00011 Score=58.27 Aligned_cols=100 Identities=19% Similarity=0.019 Sum_probs=71.9
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-C
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL-G 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll-G 114 (143)
+||.||++.+..++..+ |+|.-.. ... ...........|..++..+...++++.++++...+...|+|||++ |
T Consensus 7 ~~g~Vy~~~~~~~~~~~-aiK~~~~----~~~-~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 7 SFGKVMLAELKGTDEVY-AIKVLKK----DVI-LQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CCeEEEEEEECCCCCEE-EEEEEeH----HHh-hhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 48999999999988877 7776321 000 001111234457777766667789999999999999999999998 4
Q ss_pred cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 115 PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 115 ~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.+|.+.... .+.++...+..++.|+++
T Consensus 81 ~~L~~~l~~-~~~~~~~~~~~~~~qi~~ 107 (321)
T cd05591 81 GDLMFQIQR-SRKFDEPRSRFYAAEVTL 107 (321)
T ss_pred CcHHHHHHH-cCCCCHHHHHHHHHHHHH
Confidence 688766544 477999999999888764
No 99
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=97.91 E-value=0.00019 Score=55.77 Aligned_cols=99 Identities=15% Similarity=0.079 Sum_probs=70.9
Q ss_pred ccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccC-c
Q psy16459 37 FGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLG-P 115 (143)
Q Consensus 37 fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG-~ 115 (143)
||.||.+.+..+++.+ |++.--. ... ...........|+.++.++ ..++++.+++....+.+.++||+.+. .
T Consensus 13 ~g~vy~~~~~~~~~~~-aiK~~~~----~~~-~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 85 (285)
T cd05632 13 FGEVCACQVRATGKMY-ACKRLEK----KRI-KKRKGESMALNEKQILEKV-NSQFVVNLAYAYETKDALCLVLTIMNGG 85 (285)
T ss_pred CeEEEEEEECCCCcEE-EEEEeeh----hhh-hhhhHHHHHHHHHHHHHHc-CCcCceeEEEEEecCCEEEEEEEeccCc
Confidence 9999999999998877 6664211 000 0011112345688888776 44578888888888899999999775 5
Q ss_pred CHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 116 SLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 116 sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
+|.+..... ...++...+..++.|+++
T Consensus 86 ~L~~~~~~~~~~~~~~~~~~~~~~ql~~ 113 (285)
T cd05632 86 DLKFHIYNMGNPGFEEERALFYAAEILC 113 (285)
T ss_pred cHHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 888776555 567999999999999864
No 100
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=97.91 E-value=7.9e-05 Score=57.33 Aligned_cols=99 Identities=20% Similarity=0.170 Sum_probs=73.9
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccCc
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLGP 115 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG~ 115 (143)
.||.||++.+..++..+ +++.=.... ...........|+.++.++. .+++.+++++...+.+.|+|||.++.
T Consensus 12 ~~~~v~~~~~~~~~~~~-~ik~~~~~~------~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~e~~~~ 83 (284)
T cd07860 12 TYGVVYKARNKLTGEVV-ALKKIRLDT------ETEGVPSTAIREISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQ 83 (284)
T ss_pred CceEEEEEEECCCCCEE-EEEEccccc------cccccchHHHHHHHHHHhcC-CCCCcchhhhcccCCcEEEEeecccc
Confidence 48999999999888877 666321100 00111234667888888774 46888999998888999999999998
Q ss_pred CHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 116 SLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 116 sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
+|.+..... ...++...+..++.|+++
T Consensus 84 ~l~~~~~~~~~~~l~~~~~~~~~~~i~~ 111 (284)
T cd07860 84 DLKKFMDASPLSGIPLPLIKSYLFQLLQ 111 (284)
T ss_pred CHHHHHHhCCCCCCCHHHHHHHHHHHHH
Confidence 988877665 678999999999988764
No 101
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=97.90 E-value=9.4e-05 Score=56.16 Aligned_cols=109 Identities=16% Similarity=0.091 Sum_probs=79.9
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
++++.+.++.++ ||.||+|.+..+++.+ ++|.-.....- +. ...+..|+.++..+. .+++++
T Consensus 2 ~~~~~~~ig~g~---------~~~v~~~~~~~~~~~~-~ik~~~~~~~~-~~------~~~~~~e~~~l~~~~-~~~i~~ 63 (265)
T cd06605 2 DLEYLGELGAGN---------SGVVSKVLHRPTGKIM-AVKTIRLEINE-AI------QKQILRELDILHKCN-SPYIVG 63 (265)
T ss_pred cchHHHHhcCCC---------CeEEEEEEEcCCCcEE-EEEEEecccCh-HH------HHHHHHHHHHHHHCC-CCchhh
Confidence 456666665544 8999999998888877 66643222111 11 112456777777665 668889
Q ss_pred EEEeeecCCeeEEeecccC-cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELLG-PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~LlG-~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++....+.+.|+||+.++ .+|.++.....+.++...+..++.|+++
T Consensus 64 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~ 111 (265)
T cd06605 64 FYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLK 111 (265)
T ss_pred hheeeecCCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHH
Confidence 9998888899999999998 8999987765578999999999888764
No 102
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=97.90 E-value=0.0002 Score=54.88 Aligned_cols=100 Identities=21% Similarity=0.204 Sum_probs=73.5
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhc--CCcccEEEEeeecCCe-----eEE
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQS--NKGIPEVYYFGPCGKY-----NAL 108 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~--~~~~P~l~~~G~~~~~-----~~i 108 (143)
.||.||++.+..++..+ |+|.-....+-. +.......|+.++.++.+ .+++++++++.....+ .++
T Consensus 11 ~~~~v~~~~~~~~~~~~-aiK~~~~~~~~~------~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l 83 (287)
T cd07838 11 AYGTVYKARDLNTGRFV-ALKKVRVPLSEE------GIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTL 83 (287)
T ss_pred CceEEEEEEECCCCCEE-EEEEeccccccc------hhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEE
Confidence 38999999998888777 777653211100 111234457777777753 5789999999887766 999
Q ss_pred eecccCcCHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 109 VMELLGPSLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 109 VM~LlG~sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
+|+.++.+|.++.... ...++...+..++.|+++
T Consensus 84 ~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~ 118 (287)
T cd07838 84 VFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLR 118 (287)
T ss_pred EehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHH
Confidence 9999998999877665 457999999999998764
No 103
>KOG0616|consensus
Probab=97.90 E-value=5e-05 Score=61.02 Aligned_cols=110 Identities=15% Similarity=0.070 Sum_probs=78.3
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
.|++++-++. .+||+|..|+++.++..| |||+= +.+++.+ ..+.....+|-+|+..+. .|..-.
T Consensus 45 dfe~~~tlGt---------GSFGrV~LVr~k~~g~yY-AmKvL----~k~~vVk-lKQveH~~nEk~vL~~v~-~PFlv~ 108 (355)
T KOG0616|consen 45 DFERLKTLGT---------GSFGRVHLVREKHSGNYY-AMKVL----DKQKVVK-LKQVEHTHNEKRVLKAVS-HPFLVK 108 (355)
T ss_pred hhhheeeecc---------CccceEEEEEEccCCcee-ehhhc----CHHHHHH-HHHHHHHhhHHHHHhhcc-CceeEE
Confidence 6888888855 359999999999996545 99873 3344432 222345667777777665 445556
Q ss_pred EEEeeecCCeeEEeecccCc-CHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELLGP-SLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~LlG~-sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++.-.+.++-||||++++- -|-.+.+.+ ++|+-+.+--.|.|++.
T Consensus 109 l~~t~~d~~~lymvmeyv~GGElFS~Lrk~-~rF~e~~arFYAAeivl 155 (355)
T KOG0616|consen 109 LYGTFKDNSNLYMVMEYVPGGELFSYLRKS-GRFSEPHARFYAAEIVL 155 (355)
T ss_pred EEEeeccCCeEEEEEeccCCccHHHHHHhc-CCCCchhHHHHHHHHHH
Confidence 77777788999999999863 566655554 89999998888888653
No 104
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=97.90 E-value=6.7e-05 Score=57.71 Aligned_cols=98 Identities=19% Similarity=0.117 Sum_probs=72.3
Q ss_pred ccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccCcC
Q psy16459 37 FGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLGPS 116 (143)
Q Consensus 37 fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG~s 116 (143)
+|.||++.+..++..+ ++|.=.... . ..+.......|+.++..+. .+++++++++...+.+.|+||+.++.+
T Consensus 12 ~~~vy~~~~~~~~~~~-~ik~~~~~~-~-----~~~~~~~~~~E~~~l~~l~-~~~iv~~~~~~~~~~~~~iv~e~~~~~ 83 (283)
T cd07835 12 YGVVYKARDKLTGEIV-ALKKIRLET-E-----DEGVPSTAIREISLLKELN-HPNIVRLLDVVHSENKLYLVFEFLDLD 83 (283)
T ss_pred CeEEEEEEEcCCCCEE-EEEEeeccc-c-----cccchhHHHHHHHHHHhcC-CCCccCHhheeccCCeEEEEEeccCcC
Confidence 8999999998888877 666421110 0 0011123456777776664 568999999999999999999999988
Q ss_pred HHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 117 LEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 117 L~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
|.++.... ...++..++..++.|+++
T Consensus 84 l~~~~~~~~~~~~~~~~~~~~~~~i~~ 110 (283)
T cd07835 84 LKKYMDSSPLTGLDPPLIKSYLYQLLQ 110 (283)
T ss_pred HHHHHhhCCCCCCCHHHHHHHHHHHHH
Confidence 88876655 457999999999998764
No 105
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=97.89 E-value=0.00011 Score=58.30 Aligned_cols=103 Identities=22% Similarity=0.298 Sum_probs=74.6
Q ss_pred ccceeeccCCCCCCceeEEEEecCCCCHHH---HH---HHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEee
Q psy16459 37 FGKVMDKTDKPSGGGYQALVLSLLGPSLQD---LF---ELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVM 110 (143)
Q Consensus 37 fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~---l~---~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM 110 (143)
||.||++.|..++..+ |+|.-.......+ .+ ........+..|+.++.++. .++++.+++....+.+.++||
T Consensus 22 ~g~vy~~~~~~~~~~v-aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~ 99 (335)
T PTZ00024 22 YGKVEKAYDTLTGKIV-AIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIK-HENIMGLVDVYVEGDFINLVM 99 (335)
T ss_pred ceeEEEEEECCCCCeE-EEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCC-CcceeeeeEEEecCCcEEEEE
Confidence 9999999999888888 6665422111110 00 01111234667888888774 468899999999999999999
Q ss_pred cccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 111 ELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 111 ~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
|.++.+|.+..+. ...++...+..++.|+++
T Consensus 100 e~~~~~l~~~l~~-~~~~~~~~~~~~~~ql~~ 130 (335)
T PTZ00024 100 DIMASDLKKVVDR-KIRLTESQVKCILLQILN 130 (335)
T ss_pred eccccCHHHHHHh-cCCCCHHHHHHHHHHHHH
Confidence 9999888887654 467999999999999864
No 106
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=97.89 E-value=0.00016 Score=57.13 Aligned_cols=108 Identities=16% Similarity=0.146 Sum_probs=73.9
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEE
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEV 96 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l 96 (143)
|++.+.++.++ ||.||++.+..++..+ |+|.-.. .... ......+..|+.++..+. -+++.++
T Consensus 2 y~i~~~lg~G~---------~g~V~~~~~~~~~~~v-aiK~~~~--~~~~----~~~~~~~~~E~~~l~~l~-hpniv~~ 64 (338)
T cd07859 2 YKIQEVIGKGS---------YGVVCSAIDTHTGEKV-AIKKIND--VFEH----VSDATRILREIKLLRLLR-HPDIVEI 64 (338)
T ss_pred eEEEEEEeecC---------CeEEEEEEECCCCCEE-EEEEech--hhcc----chhHHHHHHHHHHHHhCC-CCCEeee
Confidence 56667775544 9999999999998888 7775310 0000 011123556888887764 4567777
Q ss_pred EEeeecC-----CeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 97 YYFGPCG-----KYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 97 ~~~G~~~-----~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++.... ...|+|||.++.+|.+.... .+.++...+..++.|+++
T Consensus 65 ~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~ 114 (338)
T cd07859 65 KHIMLPPSRREFKDIYVVFELMESDLHQVIKA-NDDLTPEHHQFFLYQLLR 114 (338)
T ss_pred cceEeccCCCCCceEEEEEecCCCCHHHHHHh-cccCCHHHHHHHHHHHHH
Confidence 6654322 35799999999999887654 367999999999999864
No 107
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=97.89 E-value=0.0001 Score=56.38 Aligned_cols=98 Identities=21% Similarity=0.211 Sum_probs=72.1
Q ss_pred ccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecC--CeeEEeecccC
Q psy16459 37 FGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCG--KYNALVMELLG 114 (143)
Q Consensus 37 fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~--~~~~iVM~LlG 114 (143)
||.||++.+..+++.+ ++|.-...... .........|+.++.++. .+++..+++....+ .+.|+||+..+
T Consensus 12 ~~~vy~~~~~~~~~~~-~~K~~~~~~~~------~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~lv~e~~~ 83 (287)
T cd07840 12 YGQVYKARNKKTGELV-ALKKIRMENEK------EGFPITAIREIKLLQKLR-HPNIVRLKEIVTSKGKGSIYMVFEYMD 83 (287)
T ss_pred CeEEEEEEECCCCeEE-EEEEEeccccc------ccchHHHHHHHHHHHhcc-CCCeeeheeeEecCCCCcEEEEecccc
Confidence 8999999998888776 77665421100 011123456777777665 56788888888777 89999999999
Q ss_pred cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 115 PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 115 ~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.+|.++.......++...+..++.|+++
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~i~~~i~~ 111 (287)
T cd07840 84 HDLTGLLDSPEVKFTESQIKCYMKQLLE 111 (287)
T ss_pred ccHHHHHhccCCCCCHHHHHHHHHHHHH
Confidence 8888877654568999999999998764
No 108
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=97.89 E-value=0.00013 Score=64.13 Aligned_cols=110 Identities=17% Similarity=0.160 Sum_probs=79.3
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
+|.+++.++.++ ||.||++.+..++..+ |+|.-......... ....+..|+.++.. ...+++.+
T Consensus 5 ~y~i~~~LG~G~---------fg~Vy~a~~~~~~~~v-AiKvi~~~~~~~~~-----~~~~~~~E~~~l~~-l~hp~Iv~ 68 (669)
T cd05610 5 EFVIVKPISRGA---------FGKVYLGRKKNNSKLY-AVKVVKKADMINKN-----MVHQVQAERDALAL-SKSPFIVH 68 (669)
T ss_pred CEEEEEEEecCC---------CeEEEEEEECCCCcEE-EEEEEehhhccCHH-----HHHHHHHHHHHHHh-cCCCCcCe
Confidence 678888886644 9999999999888877 77763211100000 01124556666544 35678999
Q ss_pred EEEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++..+..+.+.|+|||.+ |.+|.++.... +.++...+..++.|++.
T Consensus 69 ~~~~~~~~~~~~lVmEy~~g~~L~~li~~~-~~l~~~~~~~i~~qil~ 115 (669)
T cd05610 69 LYYSLQSANNVYLVMEYLIGGDVKSLLHIY-GYFDEEMAVKYISEVAL 115 (669)
T ss_pred EEEEEEECCEEEEEEeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHH
Confidence 999999999999999977 89999987654 67899999999998764
No 109
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=97.89 E-value=0.00015 Score=58.40 Aligned_cols=111 Identities=16% Similarity=0.052 Sum_probs=78.5
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
+|++.+.++.++ ||.||+|.+..++....|+|.=.. .... .......+..|..++..+. .+++.+
T Consensus 31 ~y~~~~~ig~G~---------~g~Vy~a~~~~~~~~~vavK~~~~----~~~~-~~~~~~~~~~E~~~l~~l~-hp~Iv~ 95 (340)
T PTZ00426 31 DFNFIRTLGTGS---------FGRVILATYKNEDFPPVAIKRFEK----SKII-KQKQVDHVFSERKILNYIN-HPFCVN 95 (340)
T ss_pred hcEEEEEEeecC---------CeEEEEEEEECCCCeEEEEEEEEH----HHhh-hhhhHHHHHHHHHHHHhCC-CCCCcc
Confidence 677777775544 999999987776654447765311 0000 0011123556777777664 578999
Q ss_pred EEEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++++...+.+.|+|||++ |.+|.++... .+.++...+..++.|++.
T Consensus 96 ~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~-~~~~~~~~~~~~~~qi~~ 142 (340)
T PTZ00426 96 LYGSFKDESYLYLVLEFVIGGEFFTFLRR-NKRFPNDVGCFYAAQIVL 142 (340)
T ss_pred eEEEEEeCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHH
Confidence 999999999999999988 6789887665 467999999999999864
No 110
>KOG0605|consensus
Probab=97.89 E-value=0.0001 Score=62.78 Aligned_cols=99 Identities=21% Similarity=0.217 Sum_probs=76.8
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
.|++|+.++.++ ||.||.|...+|++.| |||+=. +| ++. ..++.-.+.+|-.++.. ..++.+-+
T Consensus 142 DFe~Lk~IgkGA---------fGeVrLarKk~Tg~iy-AmK~Lk--KS--~M~-~~~Qv~hV~aERdiL~~-~ds~~vVK 205 (550)
T KOG0605|consen 142 DFELLKVIGKGA---------FGEVRLARKKDTGEIY-AMKILK--KS--EML-KKNQVEHVRAERDILAE-VDSPWVVK 205 (550)
T ss_pred cchhheeecccc---------ceeEEEEEEccCCcEE-eeeccc--HH--HHH-hhhhHHHHHHHHHHhhh-cCCCcEEE
Confidence 799999997755 9999999999999977 998731 11 111 12345678888888877 67889999
Q ss_pred EEEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHH
Q psy16459 96 VYYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLK 131 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~ 131 (143)
++..-++..|-|+|||.| |-++..|.... +.++-.
T Consensus 206 LyYsFQD~~~LYLiMEylPGGD~mTLL~~~-~~L~e~ 241 (550)
T KOG0605|consen 206 LYYSFQDKEYLYLIMEYLPGGDMMTLLMRK-DTLTED 241 (550)
T ss_pred EEEEecCCCeeEEEEEecCCccHHHHHHhc-CcCchH
Confidence 999999999999999988 56888887654 444443
No 111
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=97.88 E-value=9.9e-05 Score=59.70 Aligned_cols=109 Identities=16% Similarity=0.070 Sum_probs=75.9
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
||++.+.++.++ ||.||++.|..+++.+ |+|.-.. ...+... ......|+.++..+. .+++.+
T Consensus 1 ~~~~~~~lg~G~---------~g~V~~~~~~~~~~~v-aiK~~~~--~~~~~~~----~~~~~~E~~~l~~l~-h~niv~ 63 (372)
T cd07853 1 DVEPDRPIGYGA---------FGVVWSVTDPRDGKRV-ALKKMPN--VFQNLVS----CKRVFRELKMLCFFK-HDNVLS 63 (372)
T ss_pred CCcccceeeeCC---------CEEEEEEEECCCCCEE-EEEeccc--cccchHH----HHHHHHHHHHHHhCC-CCCcCC
Confidence 466777776544 9999999999888887 7775321 1111100 112456777777664 457777
Q ss_pred EEEeeecCC-----eeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGK-----YNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~-----~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++....+. ..|+||++++.+|.+.... .+.++...+..++.|+++
T Consensus 64 ~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~-~~~l~~~~~~~~~~qi~~ 114 (372)
T cd07853 64 ALDILQPPHIDPFEEIYVVTELMQSDLHKIIVS-PQPLSSDHVKVFLYQILR 114 (372)
T ss_pred HhheecCCCccccceEEEEeeccccCHHHHHhc-CCCCCHHHHHHHHHHHHH
Confidence 777766554 7899999999888876543 478999999999998764
No 112
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=97.88 E-value=0.00043 Score=52.33 Aligned_cols=108 Identities=17% Similarity=0.060 Sum_probs=78.4
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEE-ecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVL-SLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~-Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
+++++.++.+ .||.||.+.+..++..+ ++|. +....+-.. ......|+.++.++ ..+++..
T Consensus 2 y~~~~~ig~g---------~~g~v~~~~~~~~~~~~-~~k~~~~~~~~~~~-------~~~~~~e~~~l~~~-~h~~i~~ 63 (256)
T cd08221 2 YIPIRVLGKG---------AFGEATLYRRTEDDSLV-VWKEVNLTRLSEKE-------RRDALNEIVILSLL-QHPNIIA 63 (256)
T ss_pred ceEeeEeccc---------CCceEEEEEEcCCCcEE-EEEEEeecccchhH-------HHHHHHHHHHHHhC-CCCCeeE
Confidence 4555666443 38999999999988887 5553 322111111 11245788888887 4568999
Q ss_pred EEEeeecCCeeEEeeccc-CcCHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELL-GPSLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
++++...+.+.++|||.+ |.+|.+..... +..++..++..++.|+++
T Consensus 64 ~~~~~~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~ 112 (256)
T cd08221 64 YYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVS 112 (256)
T ss_pred EEeEEecCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHH
Confidence 999999999999999998 57999887665 667999999999888753
No 113
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=97.88 E-value=0.00029 Score=52.98 Aligned_cols=99 Identities=20% Similarity=0.149 Sum_probs=74.0
Q ss_pred EccceeeccCCCCC---CceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecc
Q psy16459 36 FFGKVMDKTDKPSG---GGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMEL 112 (143)
Q Consensus 36 ~fG~vy~v~d~~~~---~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~L 112 (143)
.||.||.+.+..++ ....|+|.-....+-.. ...+..|+.++..+ ..+++++++.....+...|++|+.
T Consensus 11 ~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~-------~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~i~e~ 82 (258)
T smart00219 11 AFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQ-------IEEFLREARIMRKL-DHPNIVKLLGVCTEEEPLMIVMEY 82 (258)
T ss_pred CCcceEEEEecCCCCCCCceEEEEEccCCCChHH-------HHHHHHHHHHHHhc-CCCchheEEEEEcCCCeeEEEEec
Confidence 39999999888766 23337777543322111 12356788888887 667999999999998999999998
Q ss_pred c-CcCHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 113 L-GPSLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 113 l-G~sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
+ |.+|.+..... ...++..++..++.|++.
T Consensus 83 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~ 114 (258)
T smart00219 83 MEGGDLLDYLRKNRPKELSLSDLLSFALQIAR 114 (258)
T ss_pred cCCCCHHHHHHhhhhccCCHHHHHHHHHHHHH
Confidence 8 67999987765 333999999999998864
No 114
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=97.88 E-value=0.00022 Score=54.13 Aligned_cols=110 Identities=18% Similarity=0.163 Sum_probs=80.6
Q ss_pred eeeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCC
Q psy16459 12 LLKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNK 91 (143)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~ 91 (143)
+.+.+|.+.+.++.++ ||.||++.+.++ ..+ ++|.=.... . .......|+.++.++. .+
T Consensus 3 ~~~~~~~i~~~ig~g~---------~~~v~~~~~~~~-~~~-~vK~~~~~~-~--------~~~~~~~e~~~l~~l~-h~ 61 (261)
T cd05034 3 IPRESLKLERKLGAGQ---------FGEVWMGTWNGT-TKV-AVKTLKPGT-M--------SPEAFLQEAQIMKKLR-HD 61 (261)
T ss_pred cchhheeeeeeeccCc---------ceEEEEEEEcCC-ceE-EEEEecCCc-c--------CHHHHHHHHHHHhhCC-CC
Confidence 4566888988886654 899999987644 334 676432111 1 0113556788777765 56
Q ss_pred cccEEEEeeecCCeeEEeeccc-CcCHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 92 GIPEVYYFGPCGKYNALVMELL-GPSLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 92 ~~P~l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
++++++.....+...|+||+.. |.+|.+..... +..++..++..++.|++.
T Consensus 62 ~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~ 114 (261)
T cd05034 62 KLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAE 114 (261)
T ss_pred CEeeeeeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHH
Confidence 8999999998888999999987 57999887766 678999999999988764
No 115
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=97.88 E-value=0.00012 Score=56.74 Aligned_cols=100 Identities=18% Similarity=0.050 Sum_probs=70.5
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-C
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL-G 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll-G 114 (143)
+||.||.+.+..+++.+ |+|.-.. + .. ...........|+.++..+ ..+++..++.....+.+.|+|||++ |
T Consensus 5 ~~g~Vy~~~~~~~~~~~-avK~~~~--~--~~-~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~ 77 (280)
T cd05608 5 GFGEVSACQMRATGKLY-ACKKLNK--K--RL-KKRKGYEGAMVEKRILAKV-HSRFIVSLAYAFQTKTDLCLVMTIMNG 77 (280)
T ss_pred CceeEEEEEEccCCcEE-EEEeeeH--H--HH-hhhHHHHHHHHHHHHHHhC-CCCcEeeeeEEEcCCCeEEEEEeCCCC
Confidence 49999999999998877 7765321 0 00 0001112345677777766 4567888888888888999999987 6
Q ss_pred cCHHHHHHhc---CCCCCHHHHHHHHHHHhc
Q psy16459 115 PSLEDLFDLC---NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 115 ~sL~~l~~~~---~~~fs~~T~~~ia~q~l~ 142 (143)
.+|.+..... ...++...+..++.|+++
T Consensus 78 g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~ 108 (280)
T cd05608 78 GDLRYHIYNVDEENPGFPEPRACFYTAQIIS 108 (280)
T ss_pred CCHHHHHHhccccCCCCCHHHHHHHHHHHHH
Confidence 7898765432 457999999999999864
No 116
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=97.88 E-value=9e-05 Score=57.17 Aligned_cols=109 Identities=15% Similarity=0.069 Sum_probs=78.6
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
++++++.++.++ ||.||+|.+..++..+ ++|.=....+-.. ......|+.++.++ ..+++++
T Consensus 2 ~~~~~~~ig~g~---------~g~v~~~~~~~~~~~~-a~k~~~~~~~~~~-------~~~~~~e~~~l~~~-~~~~i~~ 63 (286)
T cd06622 2 EIEVLDELGKGN---------YGSVYKVLHRPTGVTM-AMKEIRLELDESK-------FNQIIMELDILHKA-VSPYIVD 63 (286)
T ss_pred hhhhhhhhcccC---------CeEEEEEEEcCCCcEE-EEEEeecccCHHH-------HHHHHHHHHHHHhc-CCCcHHh
Confidence 567777776544 9999999999888877 6663211101000 11245577777776 4568899
Q ss_pred EEEeeecCCeeEEeeccc-CcCHHHHHHhc--CCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELL-GPSLEDLFDLC--NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~--~~~fs~~T~~~ia~q~l~ 142 (143)
+++....+.+.|+|||.+ |.+|.++.... ...++...+..++.|+++
T Consensus 64 ~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 113 (286)
T cd06622 64 FYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVK 113 (286)
T ss_pred hhhheecCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHH
Confidence 999999999999999988 56888876553 358999999999998764
No 117
>PHA03207 serine/threonine kinase US3; Provisional
Probab=97.88 E-value=0.00014 Score=59.52 Aligned_cols=108 Identities=13% Similarity=0.044 Sum_probs=80.0
Q ss_pred cceeeeeeeeeeccCCCCCCCCceEEEccceeeccCCCC--CCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhh
Q psy16459 10 MSLLKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPS--GGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQL 87 (143)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~--~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql 87 (143)
.+.++.+|++++.++.++ ||.||.+.+.++ +..+ ++|.-.. ......|+.++.++
T Consensus 87 ~~~~~~~y~i~~~Lg~G~---------~g~Vy~~~~~~~~~~~~v-~vK~~~~-------------~~~~~~E~~il~~l 143 (392)
T PHA03207 87 ASVVRMQYNILSSLTPGS---------EGEVFVCTKHGDEQRKKV-IVKAVTG-------------GKTPGREIDILKTI 143 (392)
T ss_pred chhccCceEEEEeecCCC---------CeEEEEEEEcCCccceeE-EEEeccc-------------cccHHHHHHHHHhc
Confidence 345667899999986654 899999865443 3334 5554321 12345688888877
Q ss_pred hcCCcccEEEEeeecCCeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 88 QSNKGIPEVYYFGPCGKYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 88 ~~~~~~P~l~~~G~~~~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
. -+++++++.....+.+.|+||+.++.+|.+.... .+.++...+..++.|++.
T Consensus 144 ~-h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~-~~~l~~~~~~~i~~ql~~ 196 (392)
T PHA03207 144 S-HRAIINLIHAYRWKSTVCMVMPKYKCDLFTYVDR-SGPLPLEQAITIQRRLLE 196 (392)
T ss_pred C-CCCccceeeeEeeCCEEEEEehhcCCCHHHHHHh-cCCCCHHHHHHHHHHHHH
Confidence 5 4688889988888889999999999988887633 578999999999999864
No 118
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=97.87 E-value=0.00015 Score=56.28 Aligned_cols=110 Identities=21% Similarity=0.210 Sum_probs=77.8
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
++++.+.++..+ ||.||++.+..++..+ ++|.-... ... .........|+.++.++. .++++.
T Consensus 6 ~y~~~~~lg~g~---------~~~v~~~~~~~~~~~~-~ik~~~~~-~~~-----~~~~~~~~~e~~~l~~l~-h~ni~~ 68 (293)
T cd07843 6 EYEKLNRIEEGT---------YGVVYRARDKKTGEIV-ALKKLKME-KEK-----EGFPITSLREINILLKLQ-HPNIVT 68 (293)
T ss_pred hhhhhhhhcCCC---------CeEEEEEEECCCCcEE-EEEEEeec-ccc-----ccchhhHHHHHHHHHhcC-CCCEEE
Confidence 566777775544 8999999998888877 55432110 000 011112345777777765 568888
Q ss_pred EEEeeecC--CeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCG--KYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~--~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++++...+ .+.|+||+.++.+|.++.......++...+..++.|+++
T Consensus 69 ~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~ 117 (293)
T cd07843 69 VKEVVVGSNLDKIYMVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLS 117 (293)
T ss_pred EEEEEEecCCCcEEEEehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHH
Confidence 88776555 899999999999999887765557999999999999864
No 119
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=97.87 E-value=0.00018 Score=54.85 Aligned_cols=108 Identities=17% Similarity=0.148 Sum_probs=76.9
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
.|++.+.++.+ .||.||++.+..++..+ +++.-.... .....+..|+.++..+..-+++.+
T Consensus 7 ~y~~~~~lg~g---------~~g~vy~~~~~~~~~~~-aik~~~~~~---------~~~~~~~~e~~~l~~~~~h~~i~~ 67 (272)
T cd06637 7 IFELVELVGNG---------TYGQVYKGRHVKTGQLA-AIKVMDVTG---------DEEEEIKQEINMLKKYSHHRNIAT 67 (272)
T ss_pred hhhHHHheeec---------CCeEEEEEEEcCCCcEE-EEEEEEcCC---------ccHHHHHHHHHHHHHhcCCCCeee
Confidence 45555555443 38999999999888877 666542211 112235668888877766678888
Q ss_pred EEEeeec------CCeeEEeecccCc-CHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPC------GKYNALVMELLGP-SLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~------~~~~~iVM~LlG~-sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
+++.... +.+.|+|||.++. +|.++.... +..++...+..++.|+++
T Consensus 68 ~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~ 122 (272)
T cd06637 68 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILR 122 (272)
T ss_pred EeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHH
Confidence 8877654 2468999999964 999887765 567999999999988764
No 120
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=97.87 E-value=0.00017 Score=55.24 Aligned_cols=107 Identities=20% Similarity=0.134 Sum_probs=78.1
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
++++.+.++..+ ||.||++.+..+++.+ +++.-....+..+ ...+..|+.++.++. .+++..
T Consensus 2 ~y~~~~~lg~g~---------~~~v~~~~~~~~~~~~-~ik~~~~~~~~~~-------~~~~~~e~~~l~~l~-h~~i~~ 63 (274)
T cd06609 2 LFTLLECIGKGS---------FGEVYKAIDKRTNQVV-AIKVIDLEEAEDE-------IEDIQQEIQFLSQCR-SPYITK 63 (274)
T ss_pred hhhhhhhhcCCC---------CeEEEEEEECCCCeEE-EEEEeeccccchH-------HHHHHHHHHHHHHcC-CCCeee
Confidence 455666665544 8999999999888877 8877533221111 123566888877776 457888
Q ss_pred EEEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++++...+.+.|+||+.+ |.+|.+.... +.++...+..++.|++.
T Consensus 64 ~~~~~~~~~~~~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~ 109 (274)
T cd06609 64 YYGSFLKGSKLWIIMEYCGGGSCLDLLKP--GKLDETYIAFILREVLL 109 (274)
T ss_pred eeEEEEECCeEEEEEEeeCCCcHHHHHhh--cCCCHHHHHHHHHHHHH
Confidence 888888889999999988 5688887654 38899999999998764
No 121
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=97.86 E-value=0.00014 Score=55.42 Aligned_cols=104 Identities=18% Similarity=0.095 Sum_probs=72.4
Q ss_pred EccceeeccCCCCCCceeEEEEecCC-CCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLG-PSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL- 113 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg-~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll- 113 (143)
+||.||.+.+..++..+ ++|.-... .+.............++.|+.++.++. .++++++++++..+.+.++||+.+
T Consensus 12 ~~~~v~~a~~~~~~~~~-~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~ 89 (267)
T cd06628 12 SFGSVYLGMNASSGELM-AVKQVELPSVSASSKDRKRSMLDALAREIALLKELQ-HENIVQYLGSSLDADHLNIFLEYVP 89 (267)
T ss_pred CCeEEEEEEecCCCcEE-EEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcC-CCCeeeEEEEEEeCCccEEEEEecC
Confidence 48999999998888877 66533211 111100000000124667888887774 468999999999999999999988
Q ss_pred CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 114 GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 114 G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
|.+|.++.+.. +.++...+..++.|+++
T Consensus 90 ~~~L~~~l~~~-~~l~~~~~~~~~~~l~~ 117 (267)
T cd06628 90 GGSVAALLNNY-GAFEETLVRNFVRQILK 117 (267)
T ss_pred CCCHHHHHHhc-cCccHHHHHHHHHHHHH
Confidence 67898887654 67888888888888764
No 122
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.86 E-value=0.00025 Score=56.40 Aligned_cols=119 Identities=13% Similarity=0.070 Sum_probs=83.0
Q ss_pred cccceeeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCC------ceeEEEEecCCCCHHHHHHHhCCCcchHHHH
Q psy16459 8 TSMSLLKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGG------GYQALVLSLLGPSLQDLFELCGFRFSLKTVL 81 (143)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~------~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~ 81 (143)
+...+.+.++.|.+.++.++ ||.||.|.+...++ ...++|+... +..+. ....+..|+
T Consensus 5 ~~~~~~~~~~~i~~~ig~G~---------~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~--~~~~~-----~~~~~~~E~ 68 (334)
T cd05100 5 PKWELSRTRLTLGKPLGEGC---------FGQVVMAEAIGIDKDKPNKPVTVAVKMLKD--DATDK-----DLSDLVSEM 68 (334)
T ss_pred cccccCHhHeeecceecccc---------CCcEEEEEEeccCCccCCcceeEEEEEccc--ccCHH-----HHHHHHHHH
Confidence 34455566788888887655 99999997543322 2337765432 11111 012356788
Q ss_pred HHHHhhhcCCcccEEEEeeecCCeeEEeecccC-cCHHHHHHhc---------------CCCCCHHHHHHHHHHHhc
Q psy16459 82 MIAQQLQSNKGIPEVYYFGPCGKYNALVMELLG-PSLEDLFDLC---------------NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 82 ~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG-~sL~~l~~~~---------------~~~fs~~T~~~ia~q~l~ 142 (143)
.++.++...+++.++++....+.+.|+||+.++ .+|.++.... ...++..+++.++.|+++
T Consensus 69 ~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~ 145 (334)
T cd05100 69 EMMKMIGKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVAR 145 (334)
T ss_pred HHHHhhcCCCCeeeeeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHH
Confidence 888888777899999999998889999999985 4898876542 235888999999999864
No 123
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=97.86 E-value=0.00028 Score=54.57 Aligned_cols=108 Identities=21% Similarity=0.142 Sum_probs=74.0
Q ss_pred eeeeeccCCCCCCCCceEEEccceeecc----CCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCc
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKT----DKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKG 92 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~----d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~ 92 (143)
+.+++.++..+ ||.||.+. +..++..+ ++|.-....+ ... ...+..|+.++.++. .++
T Consensus 6 ~~~~~~lg~g~---------~g~v~~~~~~~~~~~~~~~v-a~K~~~~~~~-~~~------~~~~~~e~~~l~~l~-h~~ 67 (284)
T cd05079 6 LKRIRDLGEGH---------FGKVELCRYDPEGDNTGEQV-AVKSLKPESG-GNH------IADLKKEIEILRNLY-HEN 67 (284)
T ss_pred hhhceecCCCC---------ceeEEEEEEccCCCCccceE-EEEEcCcccc-HHH------HHHHHHHHHHHHhCC-CCC
Confidence 46677776554 89998876 34445555 7776421111 111 123567888877764 467
Q ss_pred ccEEEEeeecC--CeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 93 IPEVYYFGPCG--KYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 93 ~P~l~~~G~~~--~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++++++.... .+.|+|||.. |.+|.++.......++..+++.++.|++.
T Consensus 68 i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~ 120 (284)
T cd05079 68 IVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICK 120 (284)
T ss_pred eeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHH
Confidence 88888877654 6789999999 89999987655457899999999998764
No 124
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=97.85 E-value=0.00027 Score=55.17 Aligned_cols=111 Identities=16% Similarity=0.151 Sum_probs=78.2
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCcee-EEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCccc
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQ-ALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIP 94 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~-a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P 94 (143)
+|++.+.++.++ ||.||++.+..++..+. +++. +-....... ...+..|+.++.++...+++.
T Consensus 3 ~~~~~~~lg~g~---------~g~v~~~~~~~~~~~~~~~ik~-~~~~~~~~~------~~~~~~E~~~l~~l~~hp~iv 66 (297)
T cd05089 3 DIKFEDVIGEGN---------FGQVIRAMIKKDGLKMNAAIKM-LKEFASEND------HRDFAGELEVLCKLGHHPNII 66 (297)
T ss_pred cceeeeeecCCC---------cceEEEEEecCCCCcceeEEEE-ccccCCHHH------HHHHHHHHHHHHhhcCCCchh
Confidence 677788886655 99999998887776542 3322 211111111 123566888888887778999
Q ss_pred EEEEeeecCCeeEEeeccc-CcCHHHHHHhc---------------CCCCCHHHHHHHHHHHhc
Q psy16459 95 EVYYFGPCGKYNALVMELL-GPSLEDLFDLC---------------NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 95 ~l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~---------------~~~fs~~T~~~ia~q~l~ 142 (143)
++++....+.+.|+||+.. +.+|.++.... .+.++..++..++.|++.
T Consensus 67 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~ 130 (297)
T cd05089 67 NLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVAT 130 (297)
T ss_pred heEEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHH
Confidence 9999998888999999987 46898876542 135888999999988764
No 125
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=97.85 E-value=0.00028 Score=54.98 Aligned_cols=110 Identities=15% Similarity=0.160 Sum_probs=77.1
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCCC--CCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCccc
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDKP--SGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIP 94 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~--~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P 94 (143)
|.+.+.++.++ ||.||++.+.. ++..| |+|.-..... ...+.......|+.++.++. .+++.
T Consensus 2 y~~~~~ig~g~---------~g~v~~~~~~~~~~~~~~-alK~~~~~~~-----~~~~~~~~~~~e~~~l~~l~-h~~i~ 65 (316)
T cd07842 2 YEIEGCIGRGT---------YGRVYKAKRKNGKDGKEY-AIKKFKGDKE-----QYTGISQSACREIALLRELK-HENVV 65 (316)
T ss_pred ceEEEEeccCC---------cEEEEEEEecCCCCCCeE-EEEEeccccc-----cccCccHHHHHHHHHHHhcC-CCCcc
Confidence 45666665543 99999999988 66666 8876532210 00111223456777777664 56888
Q ss_pred EEEEeeecC--CeeEEeecccCcCHHHHHHhc----CCCCCHHHHHHHHHHHhc
Q psy16459 95 EVYYFGPCG--KYNALVMELLGPSLEDLFDLC----NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 95 ~l~~~G~~~--~~~~iVM~LlG~sL~~l~~~~----~~~fs~~T~~~ia~q~l~ 142 (143)
++++..... ...|+|||+++.+|.++.... ...++..++..++.|+++
T Consensus 66 ~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 119 (316)
T cd07842 66 SLVEVFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILN 119 (316)
T ss_pred ceEEEEeCCCCceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHH
Confidence 999988877 889999999999998876543 236899999999998864
No 126
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=97.85 E-value=0.00022 Score=53.02 Aligned_cols=96 Identities=21% Similarity=0.217 Sum_probs=73.1
Q ss_pred ccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccC-c
Q psy16459 37 FGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLG-P 115 (143)
Q Consensus 37 fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG-~ 115 (143)
+|.||++.+..++..+ +++.-..... . ....+..|+.++.++. .+++++++++...+...+++|+.++ .
T Consensus 13 ~~~v~~~~~~~~~~~~-~~k~~~~~~~-~-------~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~l~~e~~~~~ 82 (253)
T cd05122 13 FGEVYKARHKRTGKEV-AIKVIKLESK-E-------KKEKIINEIQILKKCK-HPNIVKYYGSYLKKDELWIVMEFCSGG 82 (253)
T ss_pred ceEEEEEEECCCCcEE-EEEEecccch-h-------HHHHHHHHHHHHHhCC-CCCEeEEEEEEecCCeEEEEEecCCCC
Confidence 8999999999888777 6665432211 0 1123556777776665 6789999999999999999999998 8
Q ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 116 SLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 116 sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+|.++.....+.++...+..++.|+++
T Consensus 83 ~L~~~~~~~~~~~~~~~~~~i~~~i~~ 109 (253)
T cd05122 83 SLKDLLKSTNQTLTESQIAYVCKELLK 109 (253)
T ss_pred cHHHHHhhcCCCCCHHHHHHHHHHHHH
Confidence 999987665568999999999888763
No 127
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.85 E-value=0.00041 Score=54.35 Aligned_cols=117 Identities=11% Similarity=0.060 Sum_probs=80.4
Q ss_pred cceeeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCC------ceeEEEEecCCCCHHHHHHHhCCCcchHHHHHH
Q psy16459 10 MSLLKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGG------GYQALVLSLLGPSLQDLFELCGFRFSLKTVLMI 83 (143)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~------~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v 83 (143)
......++.|.+.++.++ ||.||.+.+...+. ...|+|.-. ++.... ....+..|+.+
T Consensus 13 ~~~~~~~~~i~~~lg~G~---------~g~V~~~~~~~~~~~~~~~~~~~aiK~~~--~~~~~~-----~~~~~~~e~~~ 76 (307)
T cd05098 13 WEVPRDRLVLGKPLGEGC---------FGQVVMAEAIGLDKEKPNRVTKVAVKMLK--SDATEK-----DLSDLISEMEM 76 (307)
T ss_pred ceeehHHeEEeeeeccCC---------CeeEEEeEEeccCCcccCccceEEEEecc--CCCChH-----HHHHHHHHHHH
Confidence 344456788888886655 99999987644221 123665542 221110 01125568888
Q ss_pred HHhhhcCCcccEEEEeeecCCeeEEeecccC-cCHHHHHHhc---------------CCCCCHHHHHHHHHHHhc
Q psy16459 84 AQQLQSNKGIPEVYYFGPCGKYNALVMELLG-PSLEDLFDLC---------------NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 84 ~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG-~sL~~l~~~~---------------~~~fs~~T~~~ia~q~l~ 142 (143)
+..+...++++++++....+...|+||+.++ .+|.++.... ...++..+++.++.|+++
T Consensus 77 l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~ 151 (307)
T cd05098 77 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVAR 151 (307)
T ss_pred HHHhcCCCCEeeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHH
Confidence 8877677899999999999999999999986 5898886653 135888999999998764
No 128
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=97.85 E-value=0.00015 Score=57.57 Aligned_cols=100 Identities=20% Similarity=0.093 Sum_probs=71.5
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccC-
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLG- 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG- 114 (143)
.||.||++.+..++..+ |+|.-.. + .. ...........|..++..+...+++++++.+...+...|+|||.+.
T Consensus 7 ~~g~V~~~~~~~~~~~~-aiK~~~~--~--~~-~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 7 SFGKVMLARLKESGRLY-AVKVLKK--D--VI-LQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CCeEEEEEEEcCCCCEE-EEEEEEH--H--HH-hhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 48999999999988877 7775321 0 00 0001111234566666666667899999999999999999999884
Q ss_pred cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 115 PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 115 ~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.+|.+.... .+.++...+..++.|++.
T Consensus 81 g~L~~~i~~-~~~l~~~~~~~~~~ql~~ 107 (320)
T cd05590 81 GDLMFHIQK-SRRFDEARARFYAAEITS 107 (320)
T ss_pred chHHHHHHH-cCCCCHHHHHHHHHHHHH
Confidence 688776544 467999999999998764
No 129
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=97.84 E-value=0.0003 Score=64.58 Aligned_cols=119 Identities=14% Similarity=0.097 Sum_probs=84.3
Q ss_pred cccccceeeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHHHhCCCcchHHHHHHH
Q psy16459 6 TLTSMSLLKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFELCGFRFSLKTVLMIA 84 (143)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~~~~~~~sL~tE~~v~ 84 (143)
+.........+|.|++.++..+ ||.||++.+..++..+ ++|.-.. +.+-.. ...+..|+.++
T Consensus 4 ~~~~ge~~l~~YeIl~kLG~Gg---------FGtVYLAkdk~tg~~v-AlKvIk~~~l~e~~-------~~~~~~EI~IL 66 (1021)
T PTZ00266 4 KYDDGESRLNEYEVIKKIGNGR---------FGEVFLVKHKRTQEFF-CWKAISYRGLKERE-------KSQLVIEVNVM 66 (1021)
T ss_pred cccCCccccCCEEEEEEEecCC---------CeEEEEEEECCCCeEE-EEEEEeccccCHHH-------HHHHHHHHHHH
Confidence 3444555666999999997755 9999999999988766 6654322 111111 11356688888
Q ss_pred HhhhcCCcccEEEEee--ecCCeeEEeecccC-cCHHHHHHhc---CCCCCHHHHHHHHHHHhc
Q psy16459 85 QQLQSNKGIPEVYYFG--PCGKYNALVMELLG-PSLEDLFDLC---NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 85 ~ql~~~~~~P~l~~~G--~~~~~~~iVM~LlG-~sL~~l~~~~---~~~fs~~T~~~ia~q~l~ 142 (143)
.++. .+++.++++.- ..+...||||+++. .+|.++.... .+.++...+..++.|++.
T Consensus 67 ~~L~-HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ 129 (1021)
T PTZ00266 67 RELK-HKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLH 129 (1021)
T ss_pred HHcC-CCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHH
Confidence 8775 46788887754 44568899999985 5999876543 467999999999999874
No 130
>KOG1989|consensus
Probab=97.84 E-value=0.00013 Score=64.64 Aligned_cols=110 Identities=23% Similarity=0.208 Sum_probs=86.8
Q ss_pred eeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcc
Q psy16459 14 KCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGI 93 (143)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~ 93 (143)
+-.++|.+-|+-+| |+.||.|.|.+.+..| |+|-=+. .+-.++. .+..|+.+++++.+-+++
T Consensus 36 ~~~v~V~~vLAEGG---------Fa~VYla~~~~~~~~~-AlKrm~~-~de~~L~-------~v~~EI~~MK~L~gh~nI 97 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGG---------FAQVYLAQDVKGGKKY-ALKRMYV-NDEEALN-------AVKREIDIMKLLSGHKNI 97 (738)
T ss_pred CEEEEEEEEEccCC---------cEEEEEEEecCCCcee-eeeeeec-CCHHHHH-------HHHHHHHHHHHhcCCCce
Confidence 44677888887776 9999999999998878 7766444 3655554 367799999999999999
Q ss_pred cEEEE-eee-----cCC-eeEEeecccC-cCHHHHHHhc-CCCCCHHHHHHHHHHHh
Q psy16459 94 PEVYY-FGP-----CGK-YNALVMELLG-PSLEDLFDLC-NRKFTLKTVLMIAIQLE 141 (143)
Q Consensus 94 P~l~~-~G~-----~~~-~~~iVM~LlG-~sL~~l~~~~-~~~fs~~T~~~ia~q~l 141 (143)
-.+++ +.. .+. -.++.||++. .+|-|+.+.. ..+|+-..+++|..|+-
T Consensus 98 V~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~ 154 (738)
T KOG1989|consen 98 VSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVC 154 (738)
T ss_pred eeEeccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHH
Confidence 99999 332 212 3567999999 7999998876 66799999999999864
No 131
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=97.84 E-value=0.00019 Score=56.89 Aligned_cols=111 Identities=13% Similarity=0.085 Sum_probs=76.3
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCC---CCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcc
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDK---PSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGI 93 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~---~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~ 93 (143)
|++++.++.++ ||.||.|.+. .++..+ |+|.-.- + ..............|..++.++...+++
T Consensus 2 y~~~~~lg~G~---------~g~Vy~~~~~~~~~~~~~~-aiK~~~~--~--~~~~~~~~~~~~~~e~~~l~~l~~~~~i 67 (332)
T cd05614 2 FELLKVLGTGA---------YGKVFLVRKVTGHDTGKLY-AMKVLQK--A--ALVQKAKTVEHTRTERNVLEHVRQSPFL 67 (332)
T ss_pred ceEEEEEeecC---------CEEEEEEEEcccCCCCCEE-EEEEEEH--H--HHhhhhhHHHHHHHHHHHHHhccCCCCc
Confidence 56777776644 9999988764 344545 7776421 0 0000001112356688888888777889
Q ss_pred cEEEEeeecCCeeEEeecccC-cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 94 PEVYYFGPCGKYNALVMELLG-PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 94 P~l~~~G~~~~~~~iVM~LlG-~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+.+++....+.+.|+|||.+. .+|.+.... .+.++...+..++.|+++
T Consensus 68 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~ 116 (332)
T cd05614 68 VTLHYAFQTEAKLHLILDYVSGGEMFTHLYQ-RDNFSEDEVRFYSGEIIL 116 (332)
T ss_pred ccEEEEEecCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHH
Confidence 999999888899999999984 577776543 467999999999888764
No 132
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=97.84 E-value=0.00028 Score=54.11 Aligned_cols=97 Identities=21% Similarity=0.197 Sum_probs=70.7
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhh--cCCcccEEEEeeecCCeeEEeeccc
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQ--SNKGIPEVYYFGPCGKYNALVMELL 113 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~--~~~~~P~l~~~G~~~~~~~iVM~Ll 113 (143)
.||.||++.+..++..+ ++|.-....+-.. ......|+.++.++. ..+++.++++....+.+.|+|||.+
T Consensus 13 ~~g~v~~~~~~~~~~~~-~iK~~~~~~~~~~-------~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06917 13 AYGAVYRGKHVPTGRVV-ALKIINLDTPDDD-------VSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYA 84 (277)
T ss_pred CCceEEEEEEcCCCcEE-EEEEecCCCCchh-------HHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecC
Confidence 38999999998888777 7776422111111 113556788887776 3578888888888888999999987
Q ss_pred -CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 114 -GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 114 -G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
|.+|.++.+. +.++...+..++.|+++
T Consensus 85 ~~~~L~~~~~~--~~l~~~~~~~i~~~i~~ 112 (277)
T cd06917 85 EGGSVRTLMKA--GPIAEKYISVIIREVLV 112 (277)
T ss_pred CCCcHHHHHHc--cCCCHHHHHHHHHHHHH
Confidence 7799987654 47888888888888754
No 133
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=97.84 E-value=0.00025 Score=54.47 Aligned_cols=109 Identities=17% Similarity=0.109 Sum_probs=78.5
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEE
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEV 96 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l 96 (143)
+++.+.++..+ ||.||++.+..++..+ +++.=... . ...........|+.++.++. .++++++
T Consensus 2 y~~~~~l~~g~---------~~~v~~~~~~~~~~~~-~ik~~~~~-~-----~~~~~~~~~~~e~~~l~~l~-h~~i~~~ 64 (285)
T cd07861 2 YTKIEKIGEGT---------YGVVYKGRNKKTGQIV-AMKKIRLE-S-----EEEGVPSTAIREISLLKELQ-HPNIVCL 64 (285)
T ss_pred ceEeeEecccC---------ceEEEEEEECCCCcEE-EEEEeccc-c-----ccCCchHHHHHHHHHHHhcC-CCCEeee
Confidence 55666665544 8999999998888877 66542110 0 00011123566787777774 5789999
Q ss_pred EEeeecCCeeEEeecccCcCHHHHHHhc--CCCCCHHHHHHHHHHHhc
Q psy16459 97 YYFGPCGKYNALVMELLGPSLEDLFDLC--NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 97 ~~~G~~~~~~~iVM~LlG~sL~~l~~~~--~~~fs~~T~~~ia~q~l~ 142 (143)
++....+.+.|+||+.+..+|.+..... +..++...+..++.|+++
T Consensus 65 ~~~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~ 112 (285)
T cd07861 65 QDVLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQ 112 (285)
T ss_pred EEEEeeCCeEEEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHH
Confidence 9999888999999999988888776554 467999999999999864
No 134
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=97.82 E-value=9.6e-05 Score=57.37 Aligned_cols=108 Identities=17% Similarity=0.104 Sum_probs=77.9
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
-+++++.++..+ ||.||++.+..++..+ ++++-.. .+.... .....|+.++.++. .+++++
T Consensus 13 ~y~i~~~lg~g~---------~g~vy~~~~~~~~~~~-~~k~~~~-~~~~~~-------~~~~~e~~~l~~l~-h~~i~~ 73 (292)
T cd06644 13 VWEIIGELGDGA---------FGKVYKAKNKETGALA-AAKVIET-KSEEEL-------EDYMVEIEILATCN-HPYIVK 73 (292)
T ss_pred hhhhhheecCCC---------CeEEEEEEECCCCceE-EEEEecc-CCHHHH-------HHHHHHHHHHHhCC-CCcEee
Confidence 367788886644 9999999999988877 7766432 111111 12445666666554 568999
Q ss_pred EEEeeecCCeeEEeecccC-cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELLG-PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~LlG-~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++....+...|+||+.+. .+|.++.....+.++...+..++.|++.
T Consensus 74 ~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~ 121 (292)
T cd06644 74 LLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLE 121 (292)
T ss_pred eEEEEEeCCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHH
Confidence 9999888899999999986 4676665544567899999999988764
No 135
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=97.82 E-value=0.0002 Score=56.76 Aligned_cols=100 Identities=12% Similarity=0.047 Sum_probs=68.9
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccC-
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLG- 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG- 114 (143)
+||.||++.+..++..+ |+|.-.. ..... ......+..|.....+....+++++++.....+...|+|||.+.
T Consensus 7 ~fg~V~~~~~~~~~~~~-aiK~~~~----~~~~~-~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 7 SFGKVLLARHKAEEKFY-AVKVLQK----KAILK-KKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CCeEEEEEEECCCCCEE-EEEEEEH----HHHHh-hhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 49999999999988877 7776421 00000 00011223344444444556789999999999999999999995
Q ss_pred cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 115 PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 115 ~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.+|.+.... .+.|+...+..++.|+++
T Consensus 81 ~~L~~~~~~-~~~~~~~~~~~~~~qi~~ 107 (325)
T cd05602 81 GELFYHLQR-ERCFLEPRARFYAAEIAS 107 (325)
T ss_pred CcHHHHHHh-cCCCCHHHHHHHHHHHHH
Confidence 578776554 477899999999998764
No 136
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=97.81 E-value=0.00026 Score=56.67 Aligned_cols=112 Identities=14% Similarity=0.159 Sum_probs=78.8
Q ss_pred eeeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCC
Q psy16459 12 LLKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNK 91 (143)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~ 91 (143)
.++..|.+++.++.++ ||.||.+.+..++..+ |+|.-...... +. ....+..|+.++.++. -+
T Consensus 12 ~~~~~y~~~~~lg~G~---------~g~V~~~~~~~~~~~v-avK~~~~~~~~-~~-----~~~~~~~E~~~l~~l~-h~ 74 (343)
T cd07880 12 EVPDRYRDLKQVGSGA---------YGTVCSALDRRTGAKV-AIKKLYRPFQS-EL-----FAKRAYRELRLLKHMK-HE 74 (343)
T ss_pred ccccceEEEEEeeecC---------CeEEEEEEECCCCcEE-EEEEecccccc-hH-----HHHHHHHHHHHHHhcC-CC
Confidence 3677888998886655 8999999999888877 77653211110 10 0123556888887774 35
Q ss_pred cccEEEEeeecC------CeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 92 GIPEVYYFGPCG------KYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 92 ~~P~l~~~G~~~------~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++.++++....+ ...++||+++|.+|.++.. .+.++..++..++.|+++
T Consensus 75 ~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~--~~~l~~~~~~~i~~qi~~ 129 (343)
T cd07880 75 NVIGLLDVFTPDLSLDRFHDFYLVMPFMGTDLGKLMK--HEKLSEDRIQFLVYQMLK 129 (343)
T ss_pred CccceeeeecCCccccccceEEEEEecCCCCHHHHHh--cCCCCHHHHHHHHHHHHH
Confidence 677777665443 2458999999999988765 367999999999999864
No 137
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=97.80 E-value=0.00037 Score=54.48 Aligned_cols=116 Identities=16% Similarity=0.090 Sum_probs=81.7
Q ss_pred cccccceeeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHH
Q psy16459 6 TLTSMSLLKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQ 85 (143)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ 85 (143)
+..+..-....+.+.+.++.++ ||.||++.+..+++.+ ++|.-..... ........|+.++.
T Consensus 10 ~~~~~~~~~~~y~~~~~lg~g~---------~g~v~~~~~~~~~~~v-aiK~~~~~~~--------~~~~~~~~e~~~l~ 71 (297)
T cd06656 10 SIVSVGDPKKKYTRFEKIGQGA---------SGTVYTAIDIATGQEV-AIKQMNLQQQ--------PKKELIINEILVMR 71 (297)
T ss_pred hhcccCChhhhceeeeeeccCC---------CeEEEEEEECCCCCEE-EEEEEecCcc--------chHHHHHHHHHHHH
Confidence 3344445566888888886655 8999999999888888 6664322111 01122455666665
Q ss_pred hhhcCCcccEEEEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 86 QLQSNKGIPEVYYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 86 ql~~~~~~P~l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++ ..+++..+++....+.+.|+||+.+ |.+|.++... ..++...+..++.|++.
T Consensus 72 ~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~l~~ 126 (297)
T cd06656 72 EN-KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQ 126 (297)
T ss_pred hC-CCCCEeeEEEEEecCCEEEEeecccCCCCHHHHHHh--CCCCHHHHHHHHHHHHH
Confidence 54 4568999999988899999999998 6789887653 45777888888887653
No 138
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=97.79 E-value=0.0002 Score=54.03 Aligned_cols=109 Identities=14% Similarity=0.113 Sum_probs=78.3
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEE
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEV 96 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l 96 (143)
|++.+.+...+ ||.||++.+..++..+ +++.-.. .+. . ......+..|+.++.++. .++++++
T Consensus 2 ~~~~~~l~~g~---------~~~v~~~~~~~~~~~~-~ik~~~~----~~~-~-~~~~~~~~~E~~~l~~~~-h~~i~~~ 64 (257)
T cd08225 2 YEIIKKIGEGS---------FGKIYLAKAKSDSEHC-VIKEIDL----TKM-P-VKEKEASKKEVILLAKMK-HPNIVTF 64 (257)
T ss_pred ceEEEEecCCC---------cceEEEEEEcCCCceE-EEEEeeH----hhc-c-chhhHHHHHHHHHHHhCC-CCChhhh
Confidence 45555664433 8999999999988887 7775321 100 0 011234567888877764 5688999
Q ss_pred EEeeecCCeeEEeeccc-CcCHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 97 YYFGPCGKYNALVMELL-GPSLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 97 ~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
++....+.+.|+|||.+ |.+|.+..... +..++..++..++.|+++
T Consensus 65 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~ 112 (257)
T cd08225 65 FASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISL 112 (257)
T ss_pred hheeccCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHH
Confidence 99988899999999988 78999887665 456888889888888753
No 139
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=97.79 E-value=0.00061 Score=51.46 Aligned_cols=108 Identities=20% Similarity=0.143 Sum_probs=80.2
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
+|++.+.++..+ ||.||++.+..+++.+ +++.-.....- .. ......|+..+..+. .+++++
T Consensus 2 ~~~~~~~i~~g~---------~~~v~~~~~~~~~~~~-~vk~~~~~~~~-~~------~~~~~~e~~~l~~l~-~~~i~~ 63 (264)
T cd06623 2 DLERVKVLGQGS---------SGVVYKVRHKPTGKIY-ALKKIHVDGDE-EF------RKQLLRELKTLRSCE-SPYVVK 63 (264)
T ss_pred cceeeeeeeecC---------CeEEEEEEEcCCCcEE-EEEEeccCcch-HH------HHHHHHHHHHHHhcC-CCCeee
Confidence 567777775544 8999999999988877 66653322110 11 123556777777665 668999
Q ss_pred EEEeeecCCeeEEeecccC-cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELLG-PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~LlG-~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++....+...|+|||.+. .+|.++.... ..++..++..++.|+++
T Consensus 64 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~ 110 (264)
T cd06623 64 CYGAFYKEGEISIVLEYMDGGSLADLLKKV-GKIPEPVLAYIARQILK 110 (264)
T ss_pred EEEEEccCCeEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHH
Confidence 9999999999999999997 7999887654 77999999999988764
No 140
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=97.79 E-value=0.00032 Score=52.62 Aligned_cols=98 Identities=20% Similarity=0.169 Sum_probs=75.3
Q ss_pred EccceeeccCCCC---CCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecc
Q psy16459 36 FFGKVMDKTDKPS---GGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMEL 112 (143)
Q Consensus 36 ~fG~vy~v~d~~~---~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~L 112 (143)
.||.||.+.+... +..+ ++|.......-. ....+..|+.++..+. .+++++++.+...+...++||+.
T Consensus 7 ~~g~v~~~~~~~~~~~~~~~-~ik~~~~~~~~~-------~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~e~ 77 (262)
T cd00192 7 AFGEVYKGKLKGKDGKTTEV-AVKTLKEDASEE-------ERKDFLKEARVMKKLG-HPNVVRLLGVCTEEEPLYLVLEY 77 (262)
T ss_pred CceEEEEEEEecCCCCCceE-EeEeeccccchh-------HHHHHHHHHHHHhhcC-CCChheeeeeecCCCceEEEEEe
Confidence 4899999988875 6666 777754322211 0123567888887776 77899999999889999999999
Q ss_pred c-CcCHHHHHHhc--------CCCCCHHHHHHHHHHHhc
Q psy16459 113 L-GPSLEDLFDLC--------NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 113 l-G~sL~~l~~~~--------~~~fs~~T~~~ia~q~l~ 142 (143)
. |.+|.+..... ...++...+..++.|+++
T Consensus 78 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 116 (262)
T cd00192 78 MEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAK 116 (262)
T ss_pred ccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHH
Confidence 9 89999987664 478999999999999864
No 141
>PTZ00284 protein kinase; Provisional
Probab=97.78 E-value=0.00018 Score=60.17 Aligned_cols=109 Identities=17% Similarity=0.171 Sum_probs=74.5
Q ss_pred eeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcC---
Q psy16459 14 KCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSN--- 90 (143)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~--- 90 (143)
...|.+++.++.++ ||.||++.+..+++.+ |+|+-...+ .. ......|+.++..+...
T Consensus 128 ~~~y~i~~~lG~G~---------fg~V~~a~~~~~~~~v-AvK~i~~~~---~~------~~~~~~e~~~l~~l~~~~~~ 188 (467)
T PTZ00284 128 TQRFKILSLLGEGT---------FGKVVEAWDRKRKEYC-AVKIVRNVP---KY------TRDAKIEIQFMEKVRQADPA 188 (467)
T ss_pred CCcEEEEEEEEecc---------CEEEEEEEEcCCCeEE-EEEEEecch---hh------HHHHHHHHHHHHHHhhcCcc
Confidence 35678888886644 9999999999888777 887642100 00 11234566666665432
Q ss_pred --CcccEEEEeee-cCCeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 91 --KGIPEVYYFGP-CGKYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 91 --~~~P~l~~~G~-~~~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.+++.++.+-. ...+.++||+.+|.+|.+..... +.|+...+..++.|++.
T Consensus 189 ~~~~i~~i~~~~~~~~~~~~iv~~~~g~~l~~~l~~~-~~l~~~~~~~i~~qi~~ 242 (467)
T PTZ00284 189 DRFPLMKIQRYFQNETGHMCIVMPKYGPCLLDWIMKH-GPFSHRHLAQIIFQTGV 242 (467)
T ss_pred cCcceeeeEEEEEcCCceEEEEEeccCCCHHHHHHHc-CCCCHHHHHHHHHHHHH
Confidence 23555655544 34688999999999998876543 67999999999998764
No 142
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=97.77 E-value=0.00034 Score=55.54 Aligned_cols=109 Identities=14% Similarity=0.045 Sum_probs=75.2
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCCCC--CCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCccc
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPS--GGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIP 94 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~--~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P 94 (143)
|.+.+.++.. .||.||.|.+..+ +..+ |+|.-....+... .......|+.++.++.+.++++
T Consensus 2 y~~~~~lg~G---------~~g~vy~~~~~~~~~~~~~-aiK~~~~~~~~~~------~~~~~~~E~~~l~~l~~h~~iv 65 (332)
T cd07857 2 YELIKELGQG---------AYGIVCSARNAETSEEETV-AIKKITNVFSKKI------LAKRALRELKLLRHFRGHKNIT 65 (332)
T ss_pred ceEEEEcccc---------CCeEEEEEEeCCCCcCceE-EEEEeccccccch------hHHHHHHHHHHHHHhcCCCChh
Confidence 4555666443 3899999999877 6555 7775321101000 0112455888888887778899
Q ss_pred EEEEeeec----CCeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 95 EVYYFGPC----GKYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 95 ~l~~~G~~----~~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++++.+.. ....|++|++++.+|.+.... .+.|+..++..++.|+++
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~ 116 (332)
T cd07857 66 CLYDMDIVFPGNFNELYLYEELMEADLHQIIRS-GQPLTDAHFQSFIYQILC 116 (332)
T ss_pred eeeeeeeeccccCCcEEEEEecccCCHHHHHhc-CCCCCHHHHHHHHHHHHH
Confidence 98886532 256799999999999887654 477999999999999864
No 143
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=97.77 E-value=0.00044 Score=52.55 Aligned_cols=106 Identities=16% Similarity=0.104 Sum_probs=76.2
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
.|++++.++.++ ||.||++.+.++ ..+ ++|.-. ++-.. ......|+.++..+. .+++.+
T Consensus 7 ~~~~~~~lg~g~---------~g~v~~~~~~~~-~~v-~iK~~~--~~~~~-------~~~~~~e~~~l~~l~-h~~i~~ 65 (261)
T cd05072 7 SIKLVKKLGAGQ---------FGEVWMGYYNNS-TKV-AVKTLK--PGTMS-------VQAFLEEANLMKTLQ-HDKLVR 65 (261)
T ss_pred HeEEeeecCCcC---------CceEEEEEecCC-ceE-EEEEcc--CCchh-------HHHHHHHHHHHHhCC-CCCeee
Confidence 678888886655 899999886543 344 666522 11111 112455777777663 568889
Q ss_pred EEEeeecCCeeEEeeccc-CcCHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELL-GPSLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
+++....+...|+|||.+ |.+|.++.... +..++..+...++.|+++
T Consensus 66 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~ 114 (261)
T cd05072 66 LYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAE 114 (261)
T ss_pred EEEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 999988889999999987 67999987665 678999999988888753
No 144
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.76 E-value=0.0007 Score=53.29 Aligned_cols=112 Identities=13% Similarity=0.097 Sum_probs=78.0
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCC------CCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhh
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPS------GGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQ 88 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~------~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~ 88 (143)
.++.+.+.++.++ ||.||.|.+.+. .....++|+-.....-... .....|+.++.++.
T Consensus 12 ~~~~~~~~lg~G~---------~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~-------~~~~~E~~~l~~l~ 75 (314)
T cd05099 12 DRLVLGKPLGEGC---------FGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDL-------ADLISEMELMKLIG 75 (314)
T ss_pred HHeeeeeeecCCC---------cccEEEeeecccCCccCCcceEEEEEecCCCCChHHH-------HHHHHHHHHHHhcc
Confidence 4567777776654 899999875332 2234477664221111111 12566888888887
Q ss_pred cCCcccEEEEeeecCCeeEEeeccc-CcCHHHHHHhc---------------CCCCCHHHHHHHHHHHhc
Q psy16459 89 SNKGIPEVYYFGPCGKYNALVMELL-GPSLEDLFDLC---------------NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 89 ~~~~~P~l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~---------------~~~fs~~T~~~ia~q~l~ 142 (143)
..+++++++++...+.+.|+|||.+ |.+|.++.... ...++..+++.++.|++.
T Consensus 76 ~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~ 145 (314)
T cd05099 76 KHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVAR 145 (314)
T ss_pred CCCCeeeEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHH
Confidence 7789999999988888999999987 56999876542 246899999999999764
No 145
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=97.75 E-value=0.00014 Score=55.62 Aligned_cols=99 Identities=19% Similarity=0.138 Sum_probs=74.2
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccCc
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLGP 115 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG~ 115 (143)
.||.||.+.+..+++.+ ++|.-.....- .........|+.++..+. .+++++++++...+.+.|+||+..+.
T Consensus 11 ~~~~vy~~~~~~~~~~~-~iK~~~~~~~~------~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~~v~e~~~~ 82 (282)
T cd07829 11 TYGVVYKARDKKTGEIV-ALKKIRLDNEE------EGIPSTALREISLLKELK-HPNIVKLLDVIHTERKLYLVFEYCDM 82 (282)
T ss_pred CcceEEEeeecCCCcEE-EEEEecccccc------ccccHHHHHHHHHHHhcC-CCCHHHHHhhhhcCCceEEEecCcCc
Confidence 38999999999998888 77765432100 011123455777776664 67888999988888999999999999
Q ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 116 SLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 116 sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+|.++.......++...+..++.|++.
T Consensus 83 ~l~~~i~~~~~~~~~~~~~~~~~~i~~ 109 (282)
T cd07829 83 DLKKYLDKRPGPLSPNLIKSIMYQLLR 109 (282)
T ss_pred CHHHHHHhhccCCCHHHHHHHHHHHHH
Confidence 998887765467999999999998764
No 146
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=97.75 E-value=0.00019 Score=55.76 Aligned_cols=111 Identities=17% Similarity=0.181 Sum_probs=78.8
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCccc
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIP 94 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P 94 (143)
.+|++.+.++..+ ||.||.+.+..+++.+ +++.-..... ..........|+.++..+.. +++.
T Consensus 8 ~~y~~~~~lg~g~---------~~~v~~~~~~~~~~~~-~ik~~~~~~~------~~~~~~~~~~e~~~l~~l~h-~~i~ 70 (311)
T cd07866 8 RDYEILGKLGEGT---------FGEVYKARQIKTGRVV-ALKKILMHNE------KDGFPITALREIKILKKLKH-PNVV 70 (311)
T ss_pred ccEEEEEEeccCC---------CEEEEEEEECCCCcEE-EEEEEEeccC------CCCcchhHHHHHHHHHhcCC-CCcc
Confidence 4899999986655 8999999999998887 6765432110 00112234568888777743 5676
Q ss_pred EEEEeee--------cCCeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 95 EVYYFGP--------CGKYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 95 ~l~~~G~--------~~~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++++... .+...|+||+..+.+|.+........++...+..++.|+++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~ 126 (311)
T cd07866 71 PLIDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLE 126 (311)
T ss_pred chhhheecccccccccCceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHH
Confidence 6665543 23467999999999988876655678999999999999864
No 147
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=97.74 E-value=0.00083 Score=50.10 Aligned_cols=98 Identities=21% Similarity=0.157 Sum_probs=72.5
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecC--CeeEEeeccc
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCG--KYNALVMELL 113 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~--~~~~iVM~Ll 113 (143)
.+|.||.+.+..++..+ +++.-.....-.. ....+..|+.++.++. .+++..++.....+ ...++|||..
T Consensus 12 ~~~~v~~~~~~~~~~~~-~ik~~~~~~~~~~------~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~lv~e~~ 83 (260)
T cd06606 12 SFGSVYLALDKDTGELM-AVKSVELSGDSEE------ELEALEREIRILSSLQ-HPNIVRYYGSERDEEKNTLNIFLEYV 83 (260)
T ss_pred CceEEEEEEECCCCcEE-EEEEeeccccchH------HHHHHHHHHHHHHHcC-CCCEeeEEEEEecCCCCeEEEEEEec
Confidence 48999999999888877 6655432111000 0123566777777765 56888999998887 8999999999
Q ss_pred -CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 114 -GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 114 -G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
|.+|.++.... ..++...+..++.|++.
T Consensus 84 ~~~~L~~~~~~~-~~~~~~~~~~~~~~l~~ 112 (260)
T cd06606 84 SGGSLSSLLKKF-GKLPEPVIRKYTRQILE 112 (260)
T ss_pred CCCcHHHHHHHc-CCCCHHHHHHHHHHHHH
Confidence 89999987654 48999999999988764
No 148
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=97.73 E-value=0.0006 Score=53.05 Aligned_cols=112 Identities=12% Similarity=0.128 Sum_probs=76.4
Q ss_pred eeeeeeeeccCCCCCCCCceEEEccceeeccCCCCC---------------CceeEEEEecCCCCHHHHHHHhCCCcchH
Q psy16459 14 KCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSG---------------GGYQALVLSLLGPSLQDLFELCGFRFSLK 78 (143)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~---------------~~~~a~~~Ellg~sl~~l~~~~~~~~sL~ 78 (143)
+.+|++...++.++ ||.||.|.+.... ....++|......+-.. ...+.
T Consensus 4 ~~~~~~~~~lg~G~---------~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~-------~~~~~ 67 (296)
T cd05095 4 RKRLTFKEKLGEGQ---------FGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNA-------RNDFL 67 (296)
T ss_pred hhhceeeeeccCCC---------CCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHH-------HHHHH
Confidence 34578888886655 9999988654321 22336666532211111 11345
Q ss_pred HHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-CcCHHHHHHhc----------CCCCCHHHHHHHHHHHhc
Q psy16459 79 TVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL-GPSLEDLFDLC----------NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 79 tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~----------~~~fs~~T~~~ia~q~l~ 142 (143)
.|+.++..+ ..+++++++++...+.+.++|||.+ |.+|.++.... ...++..++..++.|++.
T Consensus 68 ~E~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 141 (296)
T cd05095 68 KEIKIMSRL-KDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIAS 141 (296)
T ss_pred HHHHHHHhC-CCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHH
Confidence 678887777 4578999999999999999999988 57999876543 135788899999998754
No 149
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=97.73 E-value=0.00031 Score=57.22 Aligned_cols=110 Identities=16% Similarity=0.090 Sum_probs=77.4
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCccc
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIP 94 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P 94 (143)
.++++++.++.++ ||.||+|.+..+++.+ |+|.=.. ..... ......+..|..++.. ...++++
T Consensus 43 ~~y~~~~~lG~G~---------fg~Vy~~~~~~~~~~~-aiK~~~~----~~~~~-~~~~~~~~~e~~i~~~-~~hp~iv 106 (370)
T cd05621 43 EDYDVVKVIGRGA---------FGEVQLVRHKSSQKVY-AMKLLSK----FEMIK-RSDSAFFWEERDIMAF-ANSPWVV 106 (370)
T ss_pred HHCeEEEEEEecC---------CeEEEEEEECCCCCEE-EEEEEEH----HHhhh-hhhHHHHHHHHHHHHh-CCCCCEe
Confidence 4677888886644 9999999999998877 7765310 00000 0011124456665544 4567899
Q ss_pred EEEEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 95 EVYYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 95 ~l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++++....+.+.|+|||.+ |.+|.++.+. ..++...+..++.|++.
T Consensus 107 ~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~--~~~~~~~~~~~~~qil~ 153 (370)
T cd05621 107 QLFCAFQDDKYLYMVMEYMPGGDLVNLMSN--YDVPEKWAKFYTAEVVL 153 (370)
T ss_pred eEEEEEEcCCEEEEEEcCCCCCcHHHHHHh--cCCCHHHHHHHHHHHHH
Confidence 9999999999999999987 6799987653 46888888888888764
No 150
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=97.73 E-value=0.00053 Score=51.96 Aligned_cols=101 Identities=18% Similarity=0.156 Sum_probs=72.3
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-C
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL-G 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll-G 114 (143)
.||.||.+.+..++..+ ++|.-.......+... ....+..|+.++.++ ..+++.+++++...+...|+|||.+ |
T Consensus 14 ~~~~vy~~~~~~~~~~~-~lk~~~~~~~~~~~~~---~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e~~~~ 88 (263)
T cd06625 14 AFGRVYLCYDVDTGREL-AVKQVPFDPDSPETKK---EVNALECEIQLLKNL-QHERIVQYYGCLRDDETLSIFMEYMPG 88 (263)
T ss_pred CceEEEEEEEcCCCcEE-EEEEEeecccchhhHH---HHHHHHHHHHHHHhC-CCCCeeeeEEEEccCCeEEEEEEECCC
Confidence 38999999998888887 7776432211111110 112367788877776 4568999999999999999999988 6
Q ss_pred cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 115 PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 115 ~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.+|.+..... +.++...+..++.|++.
T Consensus 89 ~~l~~~~~~~-~~~~~~~~~~~~~~l~~ 115 (263)
T cd06625 89 GSVKDQLKAY-GALTETVTRKYTRQILE 115 (263)
T ss_pred CcHHHHHHHh-CCCCHHHHHHHHHHHHH
Confidence 7888876543 56888888888888753
No 151
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=97.72 E-value=0.00073 Score=53.31 Aligned_cols=99 Identities=18% Similarity=0.062 Sum_probs=72.3
Q ss_pred EccceeeccCCCCCCceeEEEEe-cCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccC
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLS-LLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLG 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~E-llg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG 114 (143)
.||.||++.+..++..+ +++.- .......+. ...+..|+.++..+. .++++.+++....+...|+|||.++
T Consensus 33 ~~g~v~~~~~~~~~~~v-~ik~~~~~~~~~~~~------~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~ 104 (313)
T cd06633 33 SFGAVYFATNSHTNEVV-AVKKMSYSGKQTNEK------WQDIIKEVKFLQQLK-HPNTIEYKGCYLKEHTAWLVMEYCL 104 (313)
T ss_pred CCeEEEEEEECCCCcEE-EEEEEeccccCchHH------HHHHHHHHHHHHhCC-CCCCccEEEEEEeCCEEEEEEecCC
Confidence 38999999998888877 66543 211111111 113556777777664 5689999999999999999999999
Q ss_pred cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 115 PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 115 ~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.++.++.....+.++..++..++.|+++
T Consensus 105 ~~l~~~l~~~~~~l~~~~~~~~~~qi~~ 132 (313)
T cd06633 105 GSASDLLEVHKKPLQEVEIAAITHGALQ 132 (313)
T ss_pred CCHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 8998887655567888888888888753
No 152
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=97.72 E-value=0.00065 Score=53.60 Aligned_cols=110 Identities=15% Similarity=0.025 Sum_probs=77.5
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEec-CCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCccc
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSL-LGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIP 94 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~El-lg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P 94 (143)
.|++++.++.++ ||.||++.+..++..+ ++|.-. ......+. ...+..|+.++.++. .+++.
T Consensus 26 ~f~~~~~lg~G~---------~~~v~~~~~~~~~~~v-alK~~~~~~~~~~~~------~~~~~~e~~~l~~l~-h~~iv 88 (317)
T cd06635 26 LFTDLREIGHGS---------FGAVYFARDVRTNEVV-AIKKMSYSGKQSNEK------WQDIIKEVKFLQRIK-HPNSI 88 (317)
T ss_pred hhhhhheeccCC---------CeEEEEEEEcCCCcEE-EEEEEecCCCCchHH------HHHHHHHHHHHHhCC-CCCEE
Confidence 355566664433 8999999998888877 666432 11111111 112556777777664 46888
Q ss_pred EEEEeeecCCeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 95 EVYYFGPCGKYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 95 ~l~~~G~~~~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++++...+...|+|||.+..+|.++.......++...+..++.|+++
T Consensus 89 ~~~~~~~~~~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~ 136 (317)
T cd06635 89 EYKGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQ 136 (317)
T ss_pred EEEEEEeeCCeEEEEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 999998889999999999998998887655567888888888888753
No 153
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=97.72 E-value=0.00035 Score=53.05 Aligned_cols=100 Identities=17% Similarity=0.134 Sum_probs=70.7
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-C
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL-G 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll-G 114 (143)
.||.||++.+..+++.+ |+|.-... ++... ........|..+.......+++++++.....+.+.|+|||.+ |
T Consensus 8 ~~~~v~~a~~~~~~~~v-avK~~~~~-~~~~~----~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 8 AFGSVYLAKKRSTGDYF-AIKVLKKS-DMIAK----NQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred CCeeEEEEEecCCCCeE-EEEEecch-hhhHH----HHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 48999999998888877 77764211 11100 001123445545544446678999999999999999999998 6
Q ss_pred cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 115 PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 115 ~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.+|.++.+.. +.++...+..++.|+++
T Consensus 82 ~~L~~~l~~~-~~~~~~~~~~i~~qi~~ 108 (260)
T cd05611 82 GDCASLIKTL-GGLPEDWAKQYIAEVVL 108 (260)
T ss_pred CCHHHHHHHc-CCCCHHHHHHHHHHHHH
Confidence 7999987654 56888999999988764
No 154
>KOG0581|consensus
Probab=97.72 E-value=0.00039 Score=56.93 Aligned_cols=109 Identities=21% Similarity=0.152 Sum_probs=86.5
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCccc
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIP 94 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P 94 (143)
.+++.++.++.++ .|.||+|.++.|+.-| |+|.=.+..+-. ++ ..+-.|+.++... .++++-
T Consensus 79 ~dle~~~~lG~G~---------gG~V~kv~Hk~t~~i~-AlK~I~~~~~~~-~~------~Qi~rEl~il~~~-~spyIV 140 (364)
T KOG0581|consen 79 SDLERLGVLGSGN---------GGTVYKVRHKPTGKIY-ALKVILLNIDPA-LQ------KQILRELEILRSC-QSPYIV 140 (364)
T ss_pred HHhhhhhhcccCC---------CcEEEEEEEcCCCeEE-EEEeecccCCHH-HH------HHHHHHHHHHhhC-CCCCee
Confidence 3677777776554 7999999999999988 887653332222 22 2367799999888 778999
Q ss_pred EEEEeeecCCe-eEEeecccCc-CHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 95 EVYYFGPCGKY-NALVMELLGP-SLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 95 ~l~~~G~~~~~-~~iVM~LlG~-sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.+|+.-..+.- -+|+||..+. ||+++++.. ++++-.....||.|.|+
T Consensus 141 ~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~~-g~i~E~~L~~ia~~VL~ 189 (364)
T KOG0581|consen 141 GFYGAFYSNGEEISICMEYMDGGSLDDILKRV-GRIPEPVLGKIARAVLR 189 (364)
T ss_pred eEeEEEEeCCceEEeehhhcCCCCHHHHHhhc-CCCCHHHHHHHHHHHHH
Confidence 99998888774 8999999985 999999886 88999999999999874
No 155
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=97.71 E-value=0.00054 Score=53.63 Aligned_cols=110 Identities=14% Similarity=0.031 Sum_probs=76.5
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
+|++++.++..+ ||.||++.+..++..+ +++.-... .. ... .....+..|+.++..+ ..+++++
T Consensus 2 ~y~~~~~l~~g~---------~~~v~~~~~~~~~~~v-~ik~~~~~-~~-~~~---~~~~~~~~e~~~l~~~-~~~~i~~ 65 (305)
T cd05609 2 DFETIKLISNGA---------YGAVYLVRHKETRQRF-AMKKINKQ-NL-ILR---NQIQQVFVERDILTFA-ENPFVVS 65 (305)
T ss_pred CceEeeEeecCC---------CeeEEEEEECCCCcEE-EEEEeehh-hh-hhH---HHHHHHHHHHHHHHhC-CCCCeee
Confidence 456666775544 8999999999998887 66643211 00 000 1112344566666655 4568999
Q ss_pred EEEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++....+.+.|+|||.+ |.+|.++.+.. +.++...+..++.|+++
T Consensus 66 ~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~i~~ 112 (305)
T cd05609 66 MFCSFETKRHLCMVMEYVEGGDCATLLKNI-GALPVDMARMYFAETVL 112 (305)
T ss_pred eEEEEecCCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHH
Confidence 999999999999999987 67999887654 66888888888887653
No 156
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=97.71 E-value=0.00043 Score=52.68 Aligned_cols=111 Identities=17% Similarity=0.084 Sum_probs=78.1
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
+|++.+.++.++ ||.||.+.+..++..+ ++|.-..-...... .......|+.++..+ ..+++++
T Consensus 3 ~~~i~~~l~~g~---------~~~v~~~~~~~~~~~~-~iK~~~~~~~~~~~-----~~~~~~~e~~~l~~l-~h~~i~~ 66 (267)
T cd08228 3 NFQIEKKIGRGQ---------FSEVYRATCLLDRKPV-ALKKVQIFEMMDAK-----ARQDCVKEIDLLKQL-NHPNVIK 66 (267)
T ss_pred ceeeeeeeccCC---------CeeEEEEEEeCCCCEE-EEEEeeccccCCHH-----HHHHHHHHHHHHHhC-CCcceee
Confidence 677777775544 8999999999988887 77743210000000 011245577777766 3468999
Q ss_pred EEEeeecCCeeEEeecccC-cCHHHHHHhc---CCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELLG-PSLEDLFDLC---NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~LlG-~sL~~l~~~~---~~~fs~~T~~~ia~q~l~ 142 (143)
+++....+.+.++||++.. .+|.++.... ...++...+..++.|+++
T Consensus 67 ~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 117 (267)
T cd08228 67 YLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCS 117 (267)
T ss_pred eeeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHH
Confidence 9999888889999999987 4898876543 345888899999988764
No 157
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=97.71 E-value=0.00029 Score=56.21 Aligned_cols=100 Identities=13% Similarity=-0.031 Sum_probs=72.4
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccC-
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLG- 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG- 114 (143)
.||.||++.+..++..+ |+|.-.. ... ........+..|..++.++...+++++++++...+...|+|||.+.
T Consensus 7 ~~g~V~~~~~~~~~~~~-aiK~~~~--~~~---~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 7 SYAKVLLVRLKKTERIY-AMKVVKK--ELV---NDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CCeEEEEEEECCCCCEE-EEEEEEh--hHh---cchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 49999999999998877 7665321 000 0000112356677787777777899999999999999999999874
Q ss_pred cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 115 PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 115 ~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
-+|.+.... .+.++...+..++.|+++
T Consensus 81 ~~L~~~~~~-~~~l~~~~~~~i~~qi~~ 107 (329)
T cd05618 81 GDLMFHMQR-QRKLPEEHARFYSAEISL 107 (329)
T ss_pred CCHHHHHHH-cCCCCHHHHHHHHHHHHH
Confidence 577665443 478999999999988764
No 158
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=97.71 E-value=0.00094 Score=51.63 Aligned_cols=111 Identities=14% Similarity=0.131 Sum_probs=79.2
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCce---------------eEEEEecCCCCHHHHHHHhCCCcchHH
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGY---------------QALVLSLLGPSLQDLFELCGFRFSLKT 79 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~---------------~a~~~Ellg~sl~~l~~~~~~~~sL~t 79 (143)
..|.+.+.++.++ ||.||.+.+..+++.+ .++|.-..+.+... ......
T Consensus 5 ~~~~~~~~lg~G~---------~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~-------~~~~~~ 68 (296)
T cd05051 5 QPLNFVEKLGEGQ---------FGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNA-------REDFLK 68 (296)
T ss_pred hhCcccccccCCC---------CccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHH-------HHHHHH
Confidence 3677788886655 9999998887766433 47777543322211 113556
Q ss_pred HHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-CcCHHHHHHhcC----------CCCCHHHHHHHHHHHhc
Q psy16459 80 VLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL-GPSLEDLFDLCN----------RKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 80 E~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~----------~~fs~~T~~~ia~q~l~ 142 (143)
|+.++.++. .+++.+++++...+.+.++||+.+ |.+|.++..... ..++..++..++.|+++
T Consensus 69 e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 141 (296)
T cd05051 69 EVKILSRLS-DPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIAS 141 (296)
T ss_pred HHHHHHhcC-CCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHH
Confidence 888888774 468889999988889999999977 578988765432 26899999999998764
No 159
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=97.71 E-value=0.00059 Score=51.74 Aligned_cols=106 Identities=12% Similarity=0.053 Sum_probs=74.9
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
+|++++.++.++ ||.||.+..... ..+ ++|.-.-+... .-....|+.++..+. .+++.+
T Consensus 5 ~~~~~~~lg~G~---------~~~vy~~~~~~~-~~~-a~K~~~~~~~~---------~~~~~~e~~~l~~l~-h~~i~~ 63 (256)
T cd05114 5 ELTFMKELGSGQ---------FGVVHLGKWRAQ-IKV-AIKAINEGAMS---------EEDFIEEAKVMMKLS-HPKLVQ 63 (256)
T ss_pred HcEEeeEecCCc---------CceEEEEEeccC-ceE-EEEecccCCcc---------HHHHHHHHHHHHHCC-CCCcee
Confidence 577777776644 899999876543 345 77752211100 112455888877764 468899
Q ss_pred EEEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++++...+...++||+.+ |.+|.+........++..+...++.|+++
T Consensus 64 ~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~ 111 (256)
T cd05114 64 LYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCE 111 (256)
T ss_pred EEEEEccCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHH
Confidence 999999999999999999 57898876654457899999998888753
No 160
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=97.71 E-value=0.00054 Score=52.28 Aligned_cols=108 Identities=10% Similarity=0.119 Sum_probs=79.1
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCccc
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIP 94 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P 94 (143)
.++.+.+.++..+ ||.||++.+..++..+ ++|.-. .+..+. .....|+.++.++. .+++.
T Consensus 6 ~~~~~~~~ig~g~---------~~~v~~~~~~~~~~~~-~~K~~~--~~~~~~-------~~~~~e~~~l~~l~-h~~i~ 65 (263)
T cd05052 6 TDITMKHKLGGGQ---------YGEVYEGVWKKYSLTV-AVKTLK--EDTMEV-------EEFLKEAAVMKEIK-HPNLV 65 (263)
T ss_pred HHeEEeeecCCcc---------cceEEEEEEecCCceE-EEEEec--CCchHH-------HHHHHHHHHHHhCC-CCChh
Confidence 3677777775544 8999999998888877 777532 111111 12445777777764 46888
Q ss_pred EEEEeeecCCeeEEeeccc-CcCHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 95 EVYYFGPCGKYNALVMELL-GPSLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 95 ~l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
+++++...+...++||+.+ |.+|.+..... ...++..+...++.|+++
T Consensus 66 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~ 115 (263)
T cd05052 66 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 115 (263)
T ss_pred heEEEEcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHH
Confidence 8888888888999999987 68999887665 567899999999999864
No 161
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=97.70 E-value=0.0004 Score=52.21 Aligned_cols=99 Identities=19% Similarity=0.071 Sum_probs=71.5
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-C
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL-G 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll-G 114 (143)
.||.||.|.+..+++.+ +++.-..... .+. .......|+.++.++. .++++++++....+...|+||+.+ |
T Consensus 12 ~~~~v~~~~~~~~~~~~-~ik~~~~~~~-~~~-----~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~e~~~~ 83 (256)
T cd08530 12 SYGSVYKVKRLSDNQFY-ALKEVDLGSM-SQK-----EREDAVNEIRILASVN-HPNIISYKEAFLDGNKLCIVMEYAPF 83 (256)
T ss_pred CceeEEEEEECCCCCEE-EEEEEehhhc-cHH-----HHHHHHHHHHHHHhCC-CCCchhhhhhhccCCEEEEEehhcCC
Confidence 38999999999888888 6655321110 000 1123455777777775 678999999999999999999987 7
Q ss_pred cCHHHHHHhc---CCCCCHHHHHHHHHHHhc
Q psy16459 115 PSLEDLFDLC---NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 115 ~sL~~l~~~~---~~~fs~~T~~~ia~q~l~ 142 (143)
.+|.+..... ...++...+..++.|++.
T Consensus 84 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 114 (256)
T cd08530 84 GDLSKAISKRKKKRKLIPEQEIWRIFIQLLR 114 (256)
T ss_pred CCHHHHHHHHHhhcCCCCHHHHHHHHHHHHH
Confidence 8999875542 467898888888888753
No 162
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=97.70 E-value=0.0007 Score=53.15 Aligned_cols=115 Identities=17% Similarity=0.123 Sum_probs=78.2
Q ss_pred eeeeeeeeeeccCCCCCCCCceEEEccceeeccCCCC----CCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhh
Q psy16459 12 LLKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPS----GGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQL 87 (143)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~----~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql 87 (143)
..+.+|.+.+.++.++ ||.||.+.+... .....|+|+-.....-.. ...+..|+.++.++
T Consensus 32 ~~~~~~~~~~~ig~G~---------~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~-------~~~~~~E~~~l~~l 95 (302)
T cd05055 32 FPRNNLSFGKTLGAGA---------FGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSE-------REALMSELKIMSHL 95 (302)
T ss_pred ccHHHeEEcceeeccC---------CeeEEEEEEecCCCCCceeEEEEEecCccCChHH-------HHHHHHHHHHHHhc
Confidence 3344566666665544 888998865321 222336665422111110 12356788888888
Q ss_pred hcCCcccEEEEeeecCCeeEEeeccc-CcCHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 88 QSNKGIPEVYYFGPCGKYNALVMELL-GPSLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 88 ~~~~~~P~l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
.+.+++.+++++...+...|+|||.+ |.+|.++.+.. ...++..++..++.|+++
T Consensus 96 ~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~ 152 (302)
T cd05055 96 GNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAK 152 (302)
T ss_pred cCCCCcceEEEEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHH
Confidence 77789999999999999999999986 46898876654 445899999999998764
No 163
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=97.70 E-value=0.00045 Score=56.31 Aligned_cols=92 Identities=18% Similarity=0.145 Sum_probs=64.3
Q ss_pred eeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCC----ceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhc
Q psy16459 14 KCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGG----GYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQS 89 (143)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~----~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~ 89 (143)
+.+|++.+.++.++ ||.||++.+..+++ ...|+|+-........ ...+..|+.++..+..
T Consensus 37 ~~~~~~~~~LG~G~---------fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~-------~~~~~~E~~il~~l~~ 100 (374)
T cd05106 37 RDNLQFGKTLGAGA---------FGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDE-------REALMSELKILSHLGQ 100 (374)
T ss_pred HHHceehheecCCC---------cccEEEEEEecCCcccccceeEEEeccCCCCHHH-------HHHHHHHHHHHHhhcc
Confidence 34577888886655 99999987644332 2338877532221111 1236678998888877
Q ss_pred CCcccEEEEeeecCCeeEEeeccc-CcCHHHHH
Q psy16459 90 NKGIPEVYYFGPCGKYNALVMELL-GPSLEDLF 121 (143)
Q Consensus 90 ~~~~P~l~~~G~~~~~~~iVM~Ll-G~sL~~l~ 121 (143)
.++++++++....+...|+|||++ |.+|.+..
T Consensus 101 h~nIv~~~~~~~~~~~~~lv~ey~~~g~L~~~l 133 (374)
T cd05106 101 HKNIVNLLGACTHGGPVLVITEYCCYGDLLNFL 133 (374)
T ss_pred CCceeeEeeEecCCCCeEEeHhhccCCcHHHHH
Confidence 789999999999999999999987 45777664
No 164
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=97.70 E-value=0.00032 Score=55.66 Aligned_cols=100 Identities=14% Similarity=0.023 Sum_probs=68.7
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhh--cCCcccEEEEeeecCCeeEEeeccc
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQ--SNKGIPEVYYFGPCGKYNALVMELL 113 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~--~~~~~P~l~~~G~~~~~~~iVM~Ll 113 (143)
+||.||++.+..++..+ |+|.-. ....... ........|..++.... ..++++.++.....+.+.|+|||++
T Consensus 5 ~~g~Vy~~~~~~~~~~~-avK~~~----~~~~~~~-~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~ 78 (330)
T cd05586 5 TFGQVYQVRKKDTRRIY-AMKVLS----KKEIVAK-KEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYM 78 (330)
T ss_pred CceEEEEEEECCCCCEE-EEEEEe----HHHHhhh-hHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCC
Confidence 48999999999988877 777631 1111100 00011223444444443 6788999999999999999999987
Q ss_pred -CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 114 -GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 114 -G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
|.+|.+.... .+.++...+..++.|+++
T Consensus 79 ~~g~L~~~l~~-~~~~~~~~~~~~~~qil~ 107 (330)
T cd05586 79 SGGELFWHLQK-EGRFSEDRAKFYIAELVL 107 (330)
T ss_pred CCChHHHHHHh-cCCCCHHHHHHHHHHHHH
Confidence 5678765443 478999999999999864
No 165
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=97.70 E-value=0.00064 Score=51.89 Aligned_cols=111 Identities=18% Similarity=0.161 Sum_probs=76.2
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEE
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEV 96 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l 96 (143)
|.+.+.++..+ ||.||.+.+..++..+ ++|......+-.... .....++.|+.++.++. .+++.++
T Consensus 4 ~~~~~~lg~g~---------~g~v~~~~~~~~~~~~-~ik~~~~~~~~~~~~---~~~~~~~~ei~~l~~l~-h~~i~~~ 69 (264)
T cd06653 4 WRLGKLLGRGA---------FGEVYLCYDADTGREL-AVKQVPFDPDSQETS---KEVNALECEIQLLKNLR-HDRIVQY 69 (264)
T ss_pred eeeeeeEccCC---------CeEEEEEEEcCCCCEE-EEEEEecCcccchhh---HHHHHHHHHHHHHHHcC-CCCcceE
Confidence 55666665544 9999999999888877 887643321111100 01124677888888774 4678888
Q ss_pred EEeeecC--CeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 97 YYFGPCG--KYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 97 ~~~G~~~--~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++...+ ...++||+.+ |.+|.+..... +.++...+..++.|+++
T Consensus 70 ~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~ 117 (264)
T cd06653 70 YGCLRDPEEKKLSIFVEYMPGGSIKDQLKAY-GALTENVTRRYTRQILQ 117 (264)
T ss_pred EEEEEcCCCCEEEEEEEeCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHH
Confidence 8886543 5678999998 67898876653 45888889888888764
No 166
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=97.70 E-value=0.00069 Score=52.13 Aligned_cols=110 Identities=16% Similarity=0.125 Sum_probs=75.6
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCC-----CCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhc
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKP-----SGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQS 89 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~-----~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~ 89 (143)
..|.+.+.++..+ ||.||++.+.. +...+ ++|.-....+-.. ......|+.++..+ .
T Consensus 6 ~~~~~~~~lg~g~---------~g~vy~~~~~~~~~~~~~~~v-~ik~~~~~~~~~~-------~~~~~~e~~~l~~l-~ 67 (277)
T cd05036 6 DSITLLRALGHGA---------FGEVYEGLYRGRDGDAVELQV-AVKTLPESCSEQD-------ESDFLMEALIMSKF-N 67 (277)
T ss_pred HHcEeeeECCCCC---------CCcEEEEEEecCCCCCCceeE-EEEEcCCCCCHHH-------HHHHHHHHHHHHhC-C
Confidence 3577788786655 99999998876 34444 6664321111100 11234466666665 3
Q ss_pred CCcccEEEEeeecCCeeEEeeccc-CcCHHHHHHhc-C-----CCCCHHHHHHHHHHHhc
Q psy16459 90 NKGIPEVYYFGPCGKYNALVMELL-GPSLEDLFDLC-N-----RKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 90 ~~~~P~l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~-~-----~~fs~~T~~~ia~q~l~ 142 (143)
.+++.+++++.......|+|||.+ |.+|.++.... . ..++...++.++.|+++
T Consensus 68 ~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~ 127 (277)
T cd05036 68 HQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAK 127 (277)
T ss_pred CCCEeeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 468999999998888899999988 88999886554 1 25899999999998764
No 167
>KOG0595|consensus
Probab=97.69 E-value=0.00055 Score=56.85 Aligned_cols=110 Identities=19% Similarity=0.123 Sum_probs=83.6
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCc
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKG 92 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~ 92 (143)
...+|++.+.++. -+||.||++....++... |||.=.. ..|.. +..-.|..|++++..+. -++
T Consensus 8 ~~~~y~~~~~iG~---------GsfavVykg~h~~~~~~V-AIK~i~~-~~l~~-----k~~e~L~~Ei~iLkel~-H~n 70 (429)
T KOG0595|consen 8 VVGDYELSREIGS---------GSFAVVYKGRHKKSGTEV-AIKCIAK-KKLNK-----KLVELLLSEIKILKELK-HPN 70 (429)
T ss_pred ccccceehhhccC---------cceEEEEEeEeccCCceE-Eeeeehh-hccCH-----HHHHHHHHHHHHHHhcC-Ccc
Confidence 4457888888754 359999999999999555 7765321 11110 11235788999999887 568
Q ss_pred ccEEEEeeecCCeeEEeecccC-cCHHHHHHhcCCCCCHHHHHHHHHHH
Q psy16459 93 IPEVYYFGPCGKYNALVMELLG-PSLEDLFDLCNRKFTLKTVLMIAIQL 140 (143)
Q Consensus 93 ~P~l~~~G~~~~~~~iVM~LlG-~sL~~l~~~~~~~fs~~T~~~ia~q~ 140 (143)
+-.++++-..+++-|+|||++. -+|+++.+.. ++.+..|+-.+..|+
T Consensus 71 IV~l~d~~~~~~~i~lVMEyC~gGDLs~yi~~~-~~l~e~t~r~Fm~QL 118 (429)
T KOG0595|consen 71 IVRLLDCIEDDDFIYLVMEYCNGGDLSDYIRRR-GRLPEATARHFMQQL 118 (429)
T ss_pred eeeEEEEEecCCeEEEEEEeCCCCCHHHHHHHc-CCCCHHHHHHHHHHH
Confidence 9999999999999999999997 7999987764 688888888887774
No 168
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=97.68 E-value=0.00059 Score=52.02 Aligned_cols=112 Identities=17% Similarity=0.164 Sum_probs=74.1
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
+|++.+.++..+ ||.||.+.+..++..+ ++|.-.......+... ....+..|+.++.++ .-+++++
T Consensus 3 ~~~~~~~l~~g~---------~g~v~~~~~~~~~~~v-~ik~~~~~~~~~~~~~---~~~~~~~E~~~l~~l-~h~~i~~ 68 (265)
T cd06652 3 NWRLGKLLGQGA---------FGRVYLCYDADTGREL-AVKQVQFDPESPETSK---EVNALECEIQLLKNL-LHERIVQ 68 (265)
T ss_pred cceEeeEEecCC---------ceEEEEEEEcCCCcEE-EEEEeecCcCCcccHH---HHHHHHHHHHHHHhc-CCCCeee
Confidence 456666665443 8999999999888877 6654211110000000 012356688887766 3468888
Q ss_pred EEEeeec--CCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPC--GKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~--~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++++... +...|+||+.+ |.+|.+..... +.++...+..++.|+++
T Consensus 69 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~ 117 (265)
T cd06652 69 YYGCLRDPMERTLSIFMEHMPGGSIKDQLKSY-GALTENVTRKYTRQILE 117 (265)
T ss_pred EEeEeccCCCceEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHH
Confidence 8888765 35678999998 57898876543 56888888888888753
No 169
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=97.68 E-value=0.0012 Score=49.96 Aligned_cols=109 Identities=16% Similarity=0.079 Sum_probs=76.7
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
.|++.+.++.++ ||.||+|.+..++..+ ++|.-.....-... ..+..|+.++..+ ..+++++
T Consensus 2 ~y~~~~~lg~g~---------~~~v~~~~~~~~~~~~-~ik~~~~~~~~~~~-------~~~~~e~~~l~~l-~~~~i~~ 63 (267)
T cd06610 2 DYELIEVIGVGA---------TAVVYAAICLPNNEKV-AIKRIDLEKCQTSV-------DELRKEVQAMSQC-NHPNVVK 63 (267)
T ss_pred cceeeeeecCCC---------CeEEEEEEEcCCCcEE-EEEEeccCCcchHH-------HHHHHHHHHHHhc-CCCCEEE
Confidence 356666665544 8999999988877776 66653221111111 1245677766555 4568889
Q ss_pred EEEeeecCCeeEEeeccc-CcCHHHHHHhc-C-CCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELL-GPSLEDLFDLC-N-RKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~-~-~~fs~~T~~~ia~q~l~ 142 (143)
++.....+.+.|+||+.+ |.+|.++.+.. . ..++...+..++.|+++
T Consensus 64 ~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~ 113 (267)
T cd06610 64 YYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLK 113 (267)
T ss_pred EEEEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHH
Confidence 998888899999999999 67999887654 3 67899999888888764
No 170
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=97.68 E-value=0.00041 Score=55.00 Aligned_cols=100 Identities=14% Similarity=0.052 Sum_probs=69.0
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccC-
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLG- 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG- 114 (143)
+||.||.+.+..++..+ |+|+-... .. ...........|..+..+....+++.++++....+...|+|||++.
T Consensus 7 ~~g~V~~~~~~~~~~~~-aiK~~~~~--~~---~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 7 SFGKVLLAKRKLDGKCY-AVKVLQKK--IV---LNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CCeEEEEEEECCCCCEE-EEEEEEHH--Hh---hhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 48999999999988877 77764210 00 0000111233444444445566789999999999999999999884
Q ss_pred cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 115 PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 115 ~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.+|.+.... .+.++...+..++.|+++
T Consensus 81 ~~L~~~l~~-~~~~~~~~~~~~~~qi~~ 107 (325)
T cd05604 81 GELFFHLQR-ERSFPEPRARFYAAEIAS 107 (325)
T ss_pred CCHHHHHHH-cCCCCHHHHHHHHHHHHH
Confidence 577665443 578999999999998764
No 171
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=97.67 E-value=0.00052 Score=51.68 Aligned_cols=106 Identities=19% Similarity=0.164 Sum_probs=79.6
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
+|++.+.++..+ ||.||++.+..++..+ +++.-..... ...+..|+.++.++ ..+++++
T Consensus 4 ~y~~~~~i~~g~---------~~~v~~~~~~~~~~~~-~~k~~~~~~~----------~~~~~~e~~~~~~l-~~~~i~~ 62 (256)
T cd06612 4 VFDILEKLGEGS---------YGSVYKAIHKETGQVV-AIKVVPVEED----------LQEIIKEISILKQC-DSPYIVK 62 (256)
T ss_pred cchhhhhhcCCC---------CeEEEEEEEcCCCcEE-EEEEeecHHH----------HHHHHHHHHHHHhC-CCCcEee
Confidence 566676775543 8999999998877766 6665321100 12356688877777 6678999
Q ss_pred EEEeeecCCeeEEeecccC-cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELLG-PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~LlG-~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++....+.+.|++|+..+ .+|.++.......++...+..++.|+++
T Consensus 63 ~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~ 110 (256)
T cd06612 63 YYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLK 110 (256)
T ss_pred eeeeeecCCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHH
Confidence 9999999999999999987 5899887665678899999999988763
No 172
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=97.67 E-value=0.0008 Score=51.44 Aligned_cols=111 Identities=14% Similarity=0.141 Sum_probs=76.5
Q ss_pred eeeeeeeeccCCCCCCCCceEEEccceeeccCCCCC-----CceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhh
Q psy16459 14 KCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSG-----GGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQ 88 (143)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~-----~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~ 88 (143)
+.++.+.+.++.++ ||.||.+.+.... ..+ +++.-..+.+.... .....|+.++..+
T Consensus 5 ~~~~~~~~~lg~g~---------~g~v~~~~~~~~~~~~~~~~~-aik~~~~~~~~~~~-------~~~~~e~~~l~~~- 66 (277)
T cd05032 5 REKITLIRELGQGS---------FGMVYEGLAKGVVKGEPETRV-AIKTVNENASMRER-------IEFLNEASVMKEF- 66 (277)
T ss_pred hHHeeEEeEecCCC---------CceEEEEEEeccCCCCcceeE-EEEecCCccCHHHH-------HHHHHHHHHHHhC-
Confidence 34677888886655 8999998877544 334 77764322222211 1234566666665
Q ss_pred cCCcccEEEEeeecCCeeEEeeccc-CcCHHHHHHhc---------CCCCCHHHHHHHHHHHhc
Q psy16459 89 SNKGIPEVYYFGPCGKYNALVMELL-GPSLEDLFDLC---------NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 89 ~~~~~P~l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~---------~~~fs~~T~~~ia~q~l~ 142 (143)
..+++.+++++...+.+.|+|||.+ |.+|.+..... ...++...+..++.|+++
T Consensus 67 ~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 130 (277)
T cd05032 67 NCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIAD 130 (277)
T ss_pred CCCceeEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHH
Confidence 4568999999999999999999998 56999876542 124788889999988764
No 173
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=97.67 E-value=0.00026 Score=53.88 Aligned_cols=111 Identities=20% Similarity=0.107 Sum_probs=77.4
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
+|++.+.++.++ ||.||++.+..++..+ ++|.-..-.... .. .......|+.++..+ ..+++++
T Consensus 3 ~y~~~~~ig~g~---------~g~v~~~~~~~~~~~~-~vK~~~~~~~~~-~~----~~~~~~~e~~~l~~~-~h~~i~~ 66 (267)
T cd08229 3 NFRIEKKIGRGQ---------FSEVYRATCLLDGVPV-ALKKVQIFDLMD-AK----ARADCIKEIDLLKQL-NHPNVIK 66 (267)
T ss_pred hhhhhhhhcccC---------CeEEEEEeecCCCceE-EEEeeeehhhhh-HH----HHHHHHHHHHHHHHc-cCCchhh
Confidence 455666665543 8999999998888887 776432111001 00 012355678877766 4568899
Q ss_pred EEEeeecCCeeEEeecccC-cCHHHHHHhc---CCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELLG-PSLEDLFDLC---NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~LlG-~sL~~l~~~~---~~~fs~~T~~~ia~q~l~ 142 (143)
++++...+.+.++||+.+. .+|.++.+.. ...++..++..++.|+++
T Consensus 67 ~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 117 (267)
T cd08229 67 YYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCS 117 (267)
T ss_pred hhheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHH
Confidence 9999999999999999985 6999886643 456899999998888753
No 174
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=97.67 E-value=0.00038 Score=54.90 Aligned_cols=99 Identities=17% Similarity=0.101 Sum_probs=69.9
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-C
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL-G 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll-G 114 (143)
.||.||++.+..++..+ |+|.=.. .... ..........|..++.++ ..+++.++++....+...|+||+++ |
T Consensus 5 ~~g~Vy~~~~~~~~~~~-aiK~i~~----~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 77 (312)
T cd05585 5 SFGKVMQVRKRDTQRIY-ALKTIRK----AHIV-SRSEVTHTLAERTVLAQV-NCPFIVPLKFSFQSPEKLYLVLAFING 77 (312)
T ss_pred CCeEEEEEEECCCCCEE-EEEEEEH----HHhh-hhhHHHHHHHHHHHHHhC-CCCcEeceeeEEecCCeEEEEEcCCCC
Confidence 49999999999988877 7775310 0000 001112244577777665 4568888888888889999999988 5
Q ss_pred cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 115 PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 115 ~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.+|.+.... .++|+...+..++.|+++
T Consensus 78 g~L~~~l~~-~~~~~~~~~~~~~~qi~~ 104 (312)
T cd05585 78 GELFHHLQR-EGRFDLSRARFYTAELLC 104 (312)
T ss_pred CcHHHHHHh-cCCCCHHHHHHHHHHHHH
Confidence 688776554 467999999999988764
No 175
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=97.67 E-value=0.00038 Score=55.28 Aligned_cols=99 Identities=19% Similarity=0.126 Sum_probs=69.4
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-C
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL-G 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll-G 114 (143)
.||.||++.+..++..+ |+|.-... .... .........|+.++..+. .++++++++....+.+.|+|||.+ |
T Consensus 7 ~~g~Vy~~~~~~~~~~v-aiK~~~~~----~~~~-~~~~~~~~~E~~~l~~l~-hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (323)
T cd05595 7 TFGKVILVREKATGRYY-AMKILRKE----VIIA-KDEVAHTVTESRVLQNTR-HPFLTALKYAFQTHDRLCFVMEYANG 79 (323)
T ss_pred CCEEEEEEEECCCCCEE-EEEEEEHH----Hhhh-hHHHHHHHHHHHHHHhCC-CCCCcceeeEEecCCEEEEEEeCCCC
Confidence 49999999999988877 77764210 0000 000112345677766653 468889998888889999999988 4
Q ss_pred cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 115 PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 115 ~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.+|.+.... .+.|+...+..++.|+++
T Consensus 80 ~~L~~~l~~-~~~~~~~~~~~~~~qi~~ 106 (323)
T cd05595 80 GELFFHLSR-ERVFTEERARFYGAEIVS 106 (323)
T ss_pred CcHHHHHHH-cCCCCHHHHHHHHHHHHH
Confidence 678765543 467999999999998764
No 176
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=97.67 E-value=0.00063 Score=52.40 Aligned_cols=107 Identities=16% Similarity=0.098 Sum_probs=75.8
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEE
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEV 96 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l 96 (143)
|++++.++.++ ||.||++.+..++..+ +++.--.. +..+. .....|+.++..+ ..++++.+
T Consensus 7 ~~i~~~lg~g~---------~g~v~~~~~~~~~~~~-~~k~~~~~-~~~~~-------~~~~~e~~~l~~l-~h~~ii~~ 67 (282)
T cd06643 7 WEIIGELGDGA---------FGKVYKAQNKETGVLA-AAKVIDTK-SEEEL-------EDYMVEIDILASC-DHPNIVKL 67 (282)
T ss_pred HHHHhhcccCC---------CeEEEEEEECCCCeEE-EEEEeCCC-CHHHH-------HHHHHHHHHHHHC-CCCCeeeE
Confidence 46677776544 8999999998888766 66553221 11111 1234577766665 45789999
Q ss_pred EEeeecCCeeEEeecccC-cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 97 YYFGPCGKYNALVMELLG-PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 97 ~~~G~~~~~~~iVM~LlG-~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++....+.+.|+|||.+. .+|.++.....+.++..++..++.|+++
T Consensus 68 ~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~ 114 (282)
T cd06643 68 LDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLE 114 (282)
T ss_pred EEEEeeCCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 999888999999999885 5776654444567999999999998864
No 177
>PTZ00036 glycogen synthase kinase; Provisional
Probab=97.66 E-value=0.00055 Score=57.15 Aligned_cols=105 Identities=17% Similarity=0.162 Sum_probs=73.9
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCccc
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIP 94 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P 94 (143)
..|.+.+.++.++ ||.||++.+..++..+ |+|.-... ......|+.++..+.. +++.
T Consensus 66 ~~y~~~~~LG~G~---------fg~Vy~~~~~~~~~~v-AiK~i~~~------------~~~~~~Ei~il~~l~h-~niv 122 (440)
T PTZ00036 66 KSYKLGNIIGNGS---------FGVVYEAICIDTSEKV-AIKKVLQD------------PQYKNRELLIMKNLNH-INII 122 (440)
T ss_pred CeEEEeEEEEeCC---------CEEEEEEEECCCCCEE-EEEEEecC------------cchHHHHHHHHHhcCC-CCCc
Confidence 3577777776544 9999999999988888 77643211 1123458888877754 4565
Q ss_pred EEEEee--------ecCCeeEEeecccCcCHHHHHHhc---CCCCCHHHHHHHHHHHhc
Q psy16459 95 EVYYFG--------PCGKYNALVMELLGPSLEDLFDLC---NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 95 ~l~~~G--------~~~~~~~iVM~LlG~sL~~l~~~~---~~~fs~~T~~~ia~q~l~ 142 (143)
+++++. ....+.++|||+++.+|.++.... .+.++...+..++.|+++
T Consensus 123 ~l~~~~~~~~~~~~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~ 181 (440)
T PTZ00036 123 FLKDYYYTECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCR 181 (440)
T ss_pred ceeeeEeecccccCCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHH
Confidence 554432 223467799999999998876542 567999999999999864
No 178
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=97.66 E-value=0.00076 Score=51.72 Aligned_cols=100 Identities=18% Similarity=0.115 Sum_probs=70.8
Q ss_pred EccceeeccCCCCCCce-eEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-
Q psy16459 36 FFGKVMDKTDKPSGGGY-QALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL- 113 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~-~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll- 113 (143)
+||.||++.+.+++..+ .+++.-....+- +. ......|+.++.++...+++.+++++...+.+.|+|||.+
T Consensus 7 ~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~-~~------~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (270)
T cd05047 7 NFGQVLKARIKKDGLRMDAAIKRMKEYASK-DD------HRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 79 (270)
T ss_pred CCceEEEEEEcCCCCeeEEEEEEccccCCH-HH------HHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCC
Confidence 48999999998887654 234332211110 10 1235568888888877789999999999999999999987
Q ss_pred CcCHHHHHHhc---------------CCCCCHHHHHHHHHHHhc
Q psy16459 114 GPSLEDLFDLC---------------NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 114 G~sL~~l~~~~---------------~~~fs~~T~~~ia~q~l~ 142 (143)
|.+|.++.... ...++..++..++.|++.
T Consensus 80 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~ 123 (270)
T cd05047 80 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVAR 123 (270)
T ss_pred CCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHH
Confidence 56898876532 135788999999888753
No 179
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=97.66 E-value=0.00073 Score=51.19 Aligned_cols=111 Identities=16% Similarity=0.081 Sum_probs=78.5
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
.|++.+.++.++ ||.||++.+..++..+ ++|.-..-..... .....+..|+.++.++ ..++++.
T Consensus 3 ~y~~~~~lg~g~---------~~~v~~~~~~~~~~~~-~ik~~~~~~~~~~-----~~~~~~~~ei~~l~~~-~~~~i~~ 66 (267)
T cd08224 3 NFKIEKKIGKGQ---------FSVVYKAICLLDGRVV-ALKKVQIFEMMDA-----KARQDCLKEIDLLKQL-DHPNVIK 66 (267)
T ss_pred ceeeeeeeccCC---------ceEEEEEEEcCCCCEE-EEEEeecccccch-----hhHHHHHHHHHHHHhC-CCCCeee
Confidence 456666775544 8999999999888877 7764211111000 0122466788888776 4468899
Q ss_pred EEEeeecCCeeEEeecccC-cCHHHHHHhc---CCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELLG-PSLEDLFDLC---NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~LlG-~sL~~l~~~~---~~~fs~~T~~~ia~q~l~ 142 (143)
+++....+.+.++|||.+. .+|.++.... ...++...+..++.|+++
T Consensus 67 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 117 (267)
T cd08224 67 YLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCS 117 (267)
T ss_pred eeeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHH
Confidence 9999999999999999885 6999886543 356899999999888764
No 180
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=97.65 E-value=0.00049 Score=54.62 Aligned_cols=93 Identities=14% Similarity=0.130 Sum_probs=61.8
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCC----CCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcC
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDK----PSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSN 90 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~----~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~ 90 (143)
.++.+.+.++.++ ||.||++.+. .+.+...|+|.-..+....+. ..+..|+.++.++...
T Consensus 7 ~~~~~~~~lG~G~---------fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~-------~~~~~E~~~l~~l~~h 70 (338)
T cd05102 7 DRLRLGKVLGHGA---------FGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEH-------KALMSELKILIHIGNH 70 (338)
T ss_pred hHceeeeEeccCC---------cceEEEEEEeccCCcccchhhheeccccccchHHH-------HHHHHHHHHHHHhccC
Confidence 4677888886655 9999998642 222333477764322221111 2356788898888777
Q ss_pred CcccEEEEeeec-CCeeEEeecccC-cCHHHHHHh
Q psy16459 91 KGIPEVYYFGPC-GKYNALVMELLG-PSLEDLFDL 123 (143)
Q Consensus 91 ~~~P~l~~~G~~-~~~~~iVM~LlG-~sL~~l~~~ 123 (143)
+++..++++... +...++|||.+. -+|.++...
T Consensus 71 ~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~ 105 (338)
T cd05102 71 LNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRA 105 (338)
T ss_pred cceeeEEeEecCCCCceEEEEecCCCCcHHHHHHh
Confidence 889999987655 456789999984 688877654
No 181
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=97.65 E-value=0.00092 Score=50.93 Aligned_cols=106 Identities=11% Similarity=0.076 Sum_probs=74.1
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
++.+++.++.++ ||.||.+.+.+.. .+ |+|.=.. .... .-....|+.++.++. .+++++
T Consensus 5 ~~~~~~~lg~G~---------~~~vy~~~~~~~~-~~-aik~~~~-~~~~--------~~~~~~e~~~l~~l~-h~~i~~ 63 (256)
T cd05113 5 DLTFLKELGTGQ---------FGVVKYGKWRGQY-DV-AIKMIKE-GSMS--------EDEFIEEAKVMMKLS-HEKLVQ 63 (256)
T ss_pred HeEEeeEecCcc---------cceEEEEEecCCC-cE-EEEEcCC-Cccc--------HHHHHHHHHHHhcCC-CCCeee
Confidence 567777775544 8899998765432 34 6664211 1111 112456777777664 579999
Q ss_pred EEEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++++...+.+.|+|||.+ |.+|.++.......++...+..++.|++.
T Consensus 64 ~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~ 111 (256)
T cd05113 64 LYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCE 111 (256)
T ss_pred EEEEEccCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 999999888999999988 46888876655557999999999998764
No 182
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=97.65 E-value=0.00041 Score=55.03 Aligned_cols=99 Identities=18% Similarity=0.120 Sum_probs=69.7
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-C
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL-G 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll-G 114 (143)
.||.||++.+..+++.| |+|.-.. + .... .........|..++..+. .+++.++++....+.+.|+|||.+ |
T Consensus 7 ~~g~Vy~~~~~~~~~~~-aiK~~~~--~--~~~~-~~~~~~~~~e~~~l~~l~-hp~i~~~~~~~~~~~~~~lv~e~~~~ 79 (323)
T cd05571 7 TFGKVILVREKATGKYY-AMKILKK--E--VIIA-KDEVAHTLTESRVLQNTR-HPFLTALKYSFQTHDRLCFVMEYANG 79 (323)
T ss_pred CCeEEEEEEECCCCCEE-EEEEEEH--H--Hhhh-hHHHHHHHHHHHHHHhCC-CCCCCCEEEEEEcCCEEEEEEeCCCC
Confidence 49999999999988877 7775321 0 0000 000112345777776653 468888999999999999999988 4
Q ss_pred cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 115 PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 115 ~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.+|.+.... .+.++...+..++.|++.
T Consensus 80 ~~L~~~l~~-~~~~~~~~~~~~~~qi~~ 106 (323)
T cd05571 80 GELFFHLSR-ERVFSEDRARFYGAEIVS 106 (323)
T ss_pred CcHHHHHHH-cCCCCHHHHHHHHHHHHH
Confidence 678766544 478999999999998864
No 183
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=97.65 E-value=0.00036 Score=53.55 Aligned_cols=110 Identities=16% Similarity=0.110 Sum_probs=78.2
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
++++...++.++ ||.||++.+.++++.+ ++|.=-. +.. .......+..|+.++.++. .+++++
T Consensus 2 ~y~~~~~i~~g~---------~~~v~~~~~~~~~~~v-~vK~~~~--~~~----~~~~~~~~~~e~~~l~~l~-~~~i~~ 64 (288)
T cd07833 2 KYEVLGVVGEGA---------YGVVLKCRNKATGEIV-AIKKFKE--SED----DEDVKKTALREVKVLRQLR-HENIVN 64 (288)
T ss_pred ceeEEEEecccC---------CeeEEEEEeCCCCcEE-EEehhhh--hcc----cccchhHHHHHHHHHHhcC-CCCeee
Confidence 466777775544 8999999999888877 6653110 000 0011234667888887776 568899
Q ss_pred EEEeeecCCeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++....+...|+|||.++.++.+.+......++...+..++.|++.
T Consensus 65 ~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~ 111 (288)
T cd07833 65 LKEAFRRKGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQ 111 (288)
T ss_pred hhheEEECCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 99999889999999999998777655444566899999998888753
No 184
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=97.64 E-value=0.0008 Score=50.70 Aligned_cols=96 Identities=21% Similarity=0.184 Sum_probs=69.8
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-C
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL-G 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll-G 114 (143)
+||.||.+.+.. ++.+ ++|.-..... .+. ......|+.++.++. .++++++++......+.|+||+.+ |
T Consensus 7 ~~g~v~~~~~~~-~~~v-~~K~~~~~~~-~~~------~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~e~~~~ 76 (251)
T cd05041 7 NFGDVYKGVLKG-NTEV-AVKTCRSTLP-PDL------KRKFLQEAEILKQYD-HPNIVKLIGVCVQKQPIYIVMELVPG 76 (251)
T ss_pred CCceEEEEEEeC-CCcE-EEEeccccCC-HHH------HHHHHHHHHHHHhCC-CCCeEEEEEEEecCCCeEEEEEcCCC
Confidence 489999999877 6666 7775322111 111 123566777777664 568999999999999999999988 7
Q ss_pred cCHHHHHHhcCCCCCHHHHHHHHHHHh
Q psy16459 115 PSLEDLFDLCNRKFTLKTVLMIAIQLE 141 (143)
Q Consensus 115 ~sL~~l~~~~~~~fs~~T~~~ia~q~l 141 (143)
.+|.+........++..+++.++.|++
T Consensus 77 ~~l~~~l~~~~~~~~~~~~~~~~~~~~ 103 (251)
T cd05041 77 GSLLTFLRKKKNRLTVKKLLQMSLDAA 103 (251)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 899987665556788999998888865
No 185
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=97.64 E-value=0.00072 Score=52.17 Aligned_cols=105 Identities=13% Similarity=0.034 Sum_probs=72.8
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
+|++++.++..+ ||.||++.|..++..+ ++|.-....+.... ..+..|+.++.++ ..+++.+
T Consensus 2 ~~~~~~~lg~g~---------~~~v~~~~~~~~~~~~-aiK~~~~~~~~~~~-------~~~~~E~~~l~~l-~h~~iv~ 63 (279)
T cd06619 2 DIQYQEILGHGN---------GGTVYKAYHLLTRRIL-AVKVIPLDITVELQ-------KQIMSELEILYKC-DSPYIIG 63 (279)
T ss_pred cchheeeeccCC---------CeEEEEEEEcCCCcEE-EEEEEecCCChHHH-------HHHHHHHHHHHhC-CCCCeee
Confidence 456666665544 8999999999998877 88876443221111 1255677777665 4568999
Q ss_pred EEEeeecCCeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++....+...++|||++....-+.. ..++..++..++.|++.
T Consensus 64 ~~~~~~~~~~~~lv~e~~~~~~l~~~----~~~~~~~~~~~~~qi~~ 106 (279)
T cd06619 64 FYGAFFVENRISICTEFMDGGSLDVY----RKIPEHVLGRIAVAVVK 106 (279)
T ss_pred EEEEEEECCEEEEEEecCCCCChHHh----hcCCHHHHHHHHHHHHH
Confidence 99999999999999999875322222 35677788888888763
No 186
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=97.64 E-value=0.00073 Score=52.80 Aligned_cols=109 Identities=17% Similarity=0.074 Sum_probs=78.5
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCc
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKG 92 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~ 92 (143)
....+++.+.++..+ ||.||++.+..++..+ +++.-.... .........|+.++.++ ..++
T Consensus 18 ~~~~y~~~~~lg~g~---------~~~v~~~~~~~~~~~v-~ik~~~~~~--------~~~~~~~~~e~~~l~~~-~h~~ 78 (296)
T cd06654 18 PKKKYTRFEKIGQGA---------SGTVYTAMDVATGQEV-AIRQMNLQQ--------QPKKELIINEILVMREN-KNPN 78 (296)
T ss_pred cccceeeEEEecCCC---------CeEEEEEEECCCCcEE-EEEEEecCC--------cchHHHHHHHHHHHHhC-CCCC
Confidence 445788888885544 8999999998888887 665432111 01112355677777654 4568
Q ss_pred ccEEEEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 93 IPEVYYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 93 ~P~l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+..+++....+.+.|+||+.+ |.+|.++... ..++...+..++.|+++
T Consensus 79 v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~i~~ql~~ 127 (296)
T cd06654 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQ 127 (296)
T ss_pred EeeEEEEEEeCCEEEEeecccCCCCHHHHHHh--cCCCHHHHHHHHHHHHH
Confidence 889998888888999999988 6899987653 56888899998888764
No 187
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=97.64 E-value=0.00091 Score=53.30 Aligned_cols=112 Identities=17% Similarity=0.091 Sum_probs=78.3
Q ss_pred eeeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCC
Q psy16459 12 LLKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNK 91 (143)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~ 91 (143)
.+..++++++.++..+ ||.||++.+..++..+ ++|.-....+. ......+..|+.++.++. .+
T Consensus 7 ~~~~~y~~~~~ig~g~---------~g~v~~~~~~~~~~~v-aiK~~~~~~~~------~~~~~~~~~E~~~l~~l~-hp 69 (328)
T cd07856 7 EITNRYVDLQPVGMGA---------FGLVCSARDQLTGQNV-AIKKIMKPFST------PVLAKRTYRELKLLKHLR-HE 69 (328)
T ss_pred ccccceEEEEeecccC---------CeEEEEEEECCCCCEE-EEEEecccccc------cchhHHHHHHHHHHHhcC-CC
Confidence 4566788888886654 9999999999999988 77643210000 011223556888877764 45
Q ss_pred cccEEEEeeec-CCeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 92 GIPEVYYFGPC-GKYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 92 ~~P~l~~~G~~-~~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++.++.++... +.+.|+||+..|.+|.++.+ ...++...+..++.|+++
T Consensus 70 niv~~~~~~~~~~~~~~lv~e~~~~~L~~~~~--~~~~~~~~~~~~~~ql~~ 119 (328)
T cd07856 70 NIISLSDIFISPLEDIYFVTELLGTDLHRLLT--SRPLEKQFIQYFLYQILR 119 (328)
T ss_pred CeeeEeeeEecCCCcEEEEeehhccCHHHHHh--cCCCCHHHHHHHHHHHHH
Confidence 77788777654 56789999999999887765 356788888888888754
No 188
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=97.63 E-value=0.00099 Score=52.19 Aligned_cols=110 Identities=16% Similarity=0.032 Sum_probs=79.3
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEec-CCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCccc
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSL-LGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIP 94 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~El-lg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P 94 (143)
.+.+++.++.. .||.||.+.+..+++.+ ++|.-. .+....+.. ..+..|+.++..+ ..+++.
T Consensus 16 ~y~~~~~lg~g---------~~g~vy~~~~~~~~~~v-~iK~~~~~~~~~~~~~------~~~~~Ei~~l~~l-~h~niv 78 (307)
T cd06607 16 LFTDLREIGHG---------SFGAVYFARDVRTNEVV-AIKKMSYSGKQSNEKW------QDIIKEVRFLQQL-RHPNTI 78 (307)
T ss_pred hhhhheeecCC---------CCeEEEEEEEcCCCcEE-EEEEEeccccCcHHHH------HHHHHHHHHHHhC-CCCCEE
Confidence 35666666544 38999999998888877 776432 111111111 1245677777766 456888
Q ss_pred EEEEeeecCCeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 95 EVYYFGPCGKYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 95 ~l~~~G~~~~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++++...+...|+|||.+..++.+++....+.++...+..++.|++.
T Consensus 79 ~~~~~~~~~~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~ 126 (307)
T cd06607 79 EYKGCYLREHTAWLVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQ 126 (307)
T ss_pred EEEEEEEeCCeEEEEHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHH
Confidence 999998888999999999998998887765567899999999888764
No 189
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=97.63 E-value=0.00061 Score=54.00 Aligned_cols=109 Identities=17% Similarity=0.072 Sum_probs=73.8
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhh--cCCccc
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQ--SNKGIP 94 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~--~~~~~P 94 (143)
|.+++.++.++ ||.||++.+..++..+ |+|.=.. .+... ......+..|.+++..+. ..++++
T Consensus 1 y~i~~~lg~G~---------~g~Vy~~~~~~~~~~~-aiK~~~~----~~~~~-~~~~~~l~~e~~~~~~~~~l~hp~i~ 65 (324)
T cd05589 1 FRCLAVLGRGH---------FGKVLLAEYKKTGELY-AIKALKK----GDIIA-RDEVESLMCEKRIFETANSERHPFLV 65 (324)
T ss_pred CeEEEEEeecC---------CEEEEEEEECCCCCEE-EEEEEEH----HHhhh-hhHHHHHHHHHHHHHhccccCCCChh
Confidence 35566665544 9999999999988887 7766321 01000 011123556666665443 346889
Q ss_pred EEEEeeecCCeeEEeecccC-cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 95 EVYYFGPCGKYNALVMELLG-PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 95 ~l~~~G~~~~~~~iVM~LlG-~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++++...+.+.|+|||.+. .+|..... .+.|+...+..++.|++.
T Consensus 66 ~~~~~~~~~~~~~lv~E~~~~~~L~~~~~--~~~l~~~~~~~~~~qi~~ 112 (324)
T cd05589 66 NLFACFQTEDHVCFVMEYAAGGDLMMHIH--TDVFSEPRAVFYAACVVL 112 (324)
T ss_pred ceeeEEEcCCEEEEEEcCCCCCcHHHHhh--cCCCCHHHHHHHHHHHHH
Confidence 99999999999999999874 46654432 467999999999998864
No 190
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=97.63 E-value=0.0014 Score=50.35 Aligned_cols=110 Identities=12% Similarity=0.066 Sum_probs=76.0
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCc---eeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCC
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGG---YQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNK 91 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~---~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~ 91 (143)
.++.+++.++.++ ||.||++.+..+++. ..++|.......-.. ......|+.++..+ +.+
T Consensus 7 ~~~~~~~~ig~g~---------~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~-------~~~~~~e~~~l~~l-~h~ 69 (279)
T cd05057 7 TELEKIKVLGSGA---------FGTVYKGVWIPEGEKVKIPVAIKVLREETSPKA-------NKEILDEAYVMASV-DHP 69 (279)
T ss_pred HHcEEcceecCCC---------CccEEEEEEecCCCCcceEEEEEeccCCCCHHH-------HHHHHHHHHHHHhC-CCC
Confidence 3677788886655 899999987766653 236665432221111 12355677777766 456
Q ss_pred cccEEEEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 92 GIPEVYYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 92 ~~P~l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++.++++++.. ...++||+.+ |.+|.+........++...++.++.|+++
T Consensus 70 ~i~~~~~~~~~-~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~ 120 (279)
T cd05057 70 HVVRLLGICLS-SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAK 120 (279)
T ss_pred CcceEEEEEec-CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHH
Confidence 88888888776 6778888876 67999876655556999999999999864
No 191
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=97.63 E-value=0.00082 Score=53.28 Aligned_cols=100 Identities=10% Similarity=0.085 Sum_probs=74.6
Q ss_pred EEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccC
Q psy16459 35 YFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLG 114 (143)
Q Consensus 35 ~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG 114 (143)
..||.||.+.|..+++.+ |+|+-.....-.+. ...++.|+.+...+ .-+++.+++++...+.+.|+||+++.
T Consensus 11 ~~~~~v~~a~~~~~~~~v-aiK~~~~~~~~~~~------~~~~~~e~~~~~~l-~h~niv~~~~~~~~~~~~~~v~e~~~ 82 (328)
T cd08226 11 CNLTSVYLARHTPTGTLV-TVRITDLENCTEEH------LKALQNEVVLSHFF-RHPNIMTSWTVFTTGSWLWVISPFMA 82 (328)
T ss_pred cCceeEEEEEEcCCCcEE-EEEEeccccCCHHH------HHHHHHHHHHHHhC-CCCCcceEeeeEecCCceEEEEeccc
Confidence 568899999999999888 88875432221111 12456677665544 35689999999999999999999876
Q ss_pred -cCHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 115 -PSLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 115 -~sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
.+|.++.+.. ...++...+..++.|+++
T Consensus 83 ~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~ 112 (328)
T cd08226 83 YGSANSLLKTYFPEGMSEALIGNILFGALR 112 (328)
T ss_pred CCCHHHHHHhhcccCCCHHHHHHHHHHHHH
Confidence 5999887765 567999999999888764
No 192
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=97.63 E-value=0.00066 Score=52.04 Aligned_cols=110 Identities=11% Similarity=0.029 Sum_probs=76.1
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
.+++.+.++.++ ||.||++.+..+++.+ ++|.=....+- .........|+.++.++. .+++..
T Consensus 2 ~y~~~~~l~~g~---------~~~v~~~~~~~~~~~~-~iK~~~~~~~~------~~~~~~~~~e~~~l~~~~-h~~i~~ 64 (286)
T cd07847 2 KYEKLSKIGEGS---------YGVVFKCRNRETGQIV-AIKKFVESEDD------PVIKKIALREIRMLKQLK-HPNLVN 64 (286)
T ss_pred ceeeeeeecccC---------CeEEEEEEECCCCcEE-EEEEEeecccC------ccccHHHHHHHHHHHhCC-CCCEee
Confidence 355666665433 8999999999888877 77642211000 001122456788887765 457888
Q ss_pred EEEeeecCCeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++....+.+.++|||.+..++.+........++...+..++.|+++
T Consensus 65 ~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~ 111 (286)
T cd07847 65 LIEVFRRKRKLHLVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQ 111 (286)
T ss_pred eeeEEeeCCEEEEEEeccCccHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence 89888888999999999987665544444567999999999999864
No 193
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=97.63 E-value=0.00048 Score=54.92 Aligned_cols=99 Identities=18% Similarity=0.146 Sum_probs=69.1
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-C
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL-G 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll-G 114 (143)
+||.||++.+..++..+ |+|+-.. .. ... .........|+.++..+. .++++.+++....+...|+|||.+ |
T Consensus 7 ~~g~Vy~~~~~~~~~~~-avK~~~~--~~--~~~-~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv~Ey~~~ 79 (328)
T cd05593 7 TFGKVILVREKASGKYY-AMKILKK--EV--IIA-KDEVAHTLTESRVLKNTR-HPFLTSLKYSFQTKDRLCFVMEYVNG 79 (328)
T ss_pred CCEEEEEEEECCCCCEE-EEEEEEH--HH--hhh-hhHHHHHHHHHHHHHhCC-CCCCcceEEEEEcCCEEEEEEeCCCC
Confidence 49999999999998877 7776321 00 000 000112345666666553 368889999999999999999998 4
Q ss_pred cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 115 PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 115 ~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.+|.+.... .+.++...+..++.|++.
T Consensus 80 g~L~~~l~~-~~~l~~~~~~~~~~qi~~ 106 (328)
T cd05593 80 GELFFHLSR-ERVFSEDRTRFYGAEIVS 106 (328)
T ss_pred CCHHHHHHh-cCCCCHHHHHHHHHHHHH
Confidence 578765443 467999999999998764
No 194
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=97.62 E-value=0.00074 Score=51.50 Aligned_cols=117 Identities=18% Similarity=0.154 Sum_probs=75.1
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCC-CCHHHHHHHh-CCCcchHHHHHHHHhhhcCCccc
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLG-PSLQDLFELC-GFRFSLKTVLMIAQQLQSNKGIP 94 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg-~sl~~l~~~~-~~~~sL~tE~~v~~ql~~~~~~P 94 (143)
|++.+.++..+ ||.||++.+..+.+...++|.-..- +....-.+.. ........|+.+..+....++++
T Consensus 2 y~~~~~ig~G~---------~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~ 72 (269)
T cd08528 2 YAVLEHLGSGA---------FGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIV 72 (269)
T ss_pred chhhhhhcCCC---------CceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCee
Confidence 45566665544 8999999998854444477653211 1100000000 00011344566665555667899
Q ss_pred EEEEeeecCCeeEEeeccc-CcCHHHHHHhc---CCCCCHHHHHHHHHHHhc
Q psy16459 95 EVYYFGPCGKYNALVMELL-GPSLEDLFDLC---NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 95 ~l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~---~~~fs~~T~~~ia~q~l~ 142 (143)
.+++....+.+.|+|||.+ |.+|.++.... ...++...+..++.|++.
T Consensus 73 ~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 124 (269)
T cd08528 73 RYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVL 124 (269)
T ss_pred eEEeeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHH
Confidence 9999999999999999987 67999886542 457999999988888653
No 195
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=97.60 E-value=0.00053 Score=52.40 Aligned_cols=104 Identities=15% Similarity=0.194 Sum_probs=70.6
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHH--HHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLF--ELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL 113 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~--~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll 113 (143)
.||.||++.+..+++.+ ++|.=.......+.. ........+..|+.++.++. .+++++++++...+...++|||.+
T Consensus 13 ~~~~vy~~~~~~~~~~~-a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~ 90 (272)
T cd06629 13 TYGRVYLALNVTTGEMM-AVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLD-HLNIVQYLGFETTEEYLSIFLEYV 90 (272)
T ss_pred CceEEEEEeecCCCcee-eeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcC-CCCcceEEEEeccCCceEEEEecC
Confidence 39999999998888777 776321111100000 00000124566777777764 468999999999999999999988
Q ss_pred -CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 114 -GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 114 -G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
|.+|.++.+.. +.++...+..++.|++.
T Consensus 91 ~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~ 119 (272)
T cd06629 91 PGGSIGSCLRTY-GRFEEQLVRFFTEQVLE 119 (272)
T ss_pred CCCcHHHHHhhc-cCCCHHHHHHHHHHHHH
Confidence 77999876654 67888888888887753
No 196
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=97.60 E-value=0.0019 Score=48.55 Aligned_cols=108 Identities=19% Similarity=0.183 Sum_probs=73.0
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCC-CCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLG-PSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg-~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
|++++.++..+ ||.||+|.+..++..+ +++.-... .+-.. ...+..|+.++..+. .+++.+
T Consensus 2 y~~~~~lg~g~---------~~~v~~~~~~~~~~~~-~~k~~~~~~~~~~~-------~~~~~~e~~~l~~l~-~~~i~~ 63 (265)
T cd08217 2 YEVLETIGKGS---------FGTVRKVRRKSDGKIL-VWKEIDYGNMTEKE-------KQQLVSEVNILRELK-HPNIVR 63 (265)
T ss_pred ceeeeeeccCC---------CeEEEEeeecCCCCEE-EEEEEecccCCHHH-------HHHHHHHHHHHHhcC-CCccce
Confidence 55666665544 9999999999988877 66643211 11111 112455777766654 467888
Q ss_pred EEEeee--cCCeeEEeeccc-CcCHHHHHHhc---CCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGP--CGKYNALVMELL-GPSLEDLFDLC---NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~--~~~~~~iVM~Ll-G~sL~~l~~~~---~~~fs~~T~~~ia~q~l~ 142 (143)
+++... .+...|++||.+ |.+|.++.+.. ...++...+..++.|+++
T Consensus 64 ~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~ 116 (265)
T cd08217 64 YYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLL 116 (265)
T ss_pred eeeeeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHH
Confidence 877554 456789999998 56999887653 567899999999888764
No 197
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=97.59 E-value=0.001 Score=50.90 Aligned_cols=109 Identities=22% Similarity=0.225 Sum_probs=74.2
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCC----CCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCC
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKP----SGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNK 91 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~----~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~ 91 (143)
.+++++.++.++ ||.||++.... ++..+ |+|.-.. +.... .......|+.++..+ ..+
T Consensus 5 ~~~~~~~ig~g~---------~~~v~~~~~~~~~~~~~~~~-avK~~~~--~~~~~-----~~~~~~~ei~~l~~l-~~~ 66 (284)
T cd05038 5 HLKFIKQLGEGH---------FGKVELCRYDPLGDNTGEQV-AVKSLNH--SGEEQ-----HRSDFEREIEILRTL-DHE 66 (284)
T ss_pred hchhheeeccCC---------CeeEEEeeecCCCCCCceEE-EEEEecc--ccchH-----HHHHHHHHHHHHHhC-CCC
Confidence 455666665544 89999997543 34445 6665421 11110 011356677777766 456
Q ss_pred cccEEEEeeec--CCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 92 GIPEVYYFGPC--GKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 92 ~~P~l~~~G~~--~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++++++++... +.+.++||+.+ |.+|.+........++..++..++.|+++
T Consensus 67 ~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~ 120 (284)
T cd05038 67 NIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICK 120 (284)
T ss_pred ChheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHH
Confidence 88999888776 66899999988 67999887765557999999999998764
No 198
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=97.59 E-value=0.0014 Score=49.74 Aligned_cols=110 Identities=20% Similarity=0.148 Sum_probs=79.5
Q ss_pred eeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcc
Q psy16459 14 KCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGI 93 (143)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~ 93 (143)
..+|++.+.++..+ ||.||.+.+..++..+ +++.-..... ....+..|+.++..+...+++
T Consensus 5 ~~~y~~~~~l~~g~---------~~~v~~~~~~~~~~~~-~~k~~~~~~~---------~~~~~~~e~~~l~~~~~h~~i 65 (275)
T cd06608 5 TGIFELVEVIGEGT---------YGKVYKARHKKTGQLV-AIKIMDIIED---------EEEEIKEEYNILRKYSNHPNI 65 (275)
T ss_pred hhheeheeeecCCC---------CeEEEEEEECCCCcEE-EEEEEecCch---------hHHHHHHHHHHHHHhcCCCCh
Confidence 35677787776544 8999999998888777 6655322111 012356788888888777889
Q ss_pred cEEEEeeec------CCeeEEeecccC-cCHHHHHHhc---CCCCCHHHHHHHHHHHhc
Q psy16459 94 PEVYYFGPC------GKYNALVMELLG-PSLEDLFDLC---NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 94 P~l~~~G~~------~~~~~iVM~LlG-~sL~~l~~~~---~~~fs~~T~~~ia~q~l~ 142 (143)
++++++... +.+.|+||+.+. .+|.++.... +..++...+..++.|+++
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~ 124 (275)
T cd06608 66 ATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLR 124 (275)
T ss_pred heEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHH
Confidence 999888754 346899999986 5898886543 467999999888888764
No 199
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=97.59 E-value=0.0013 Score=51.45 Aligned_cols=112 Identities=12% Similarity=0.094 Sum_probs=75.1
Q ss_pred eeeeeeeeccCCCCCCCCceEEEccceeeccCCCCC---------------CceeEEEEecCCCCHHHHHHHhCCCcchH
Q psy16459 14 KCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSG---------------GGYQALVLSLLGPSLQDLFELCGFRFSLK 78 (143)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~---------------~~~~a~~~Ellg~sl~~l~~~~~~~~sL~ 78 (143)
+.++.+.+.++.++ ||.||++.+..+. ....|+|.-....+- +. ...+.
T Consensus 4 ~~~~~~~~~lg~G~---------fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~-~~------~~~~~ 67 (304)
T cd05096 4 RGHLLFKEKLGEGQ---------FGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANK-NA------RNDFL 67 (304)
T ss_pred hhhCeeeeEecccC---------CeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCH-HH------HHHHH
Confidence 45677777776654 9999998754322 123377654322111 11 11255
Q ss_pred HHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-CcCHHHHHHhc------------------CCCCCHHHHHHHHHH
Q psy16459 79 TVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL-GPSLEDLFDLC------------------NRKFTLKTVLMIAIQ 139 (143)
Q Consensus 79 tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~------------------~~~fs~~T~~~ia~q 139 (143)
.|+.++.++ ..+++.+++++...+...++|||.+ |.+|.++.... ...++..++..++.|
T Consensus 68 ~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 146 (304)
T cd05096 68 KEVKILSRL-KDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQ 146 (304)
T ss_pred HHHHHHhhc-CCCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHH
Confidence 688887776 4468999999998888999999987 56898875432 134788888999998
Q ss_pred Hhc
Q psy16459 140 LEG 142 (143)
Q Consensus 140 ~l~ 142 (143)
+++
T Consensus 147 i~~ 149 (304)
T cd05096 147 IAS 149 (304)
T ss_pred HHH
Confidence 764
No 200
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=97.59 E-value=0.00041 Score=53.29 Aligned_cols=110 Identities=15% Similarity=0.108 Sum_probs=75.3
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
++++.+.++..+ ||.||++.+..+++.+ ++|.=....... ........|+.++..+ ..+++++
T Consensus 2 ~y~~~~~lg~g~---------~~~vy~~~~~~~~~~~-~iK~~~~~~~~~------~~~~~~~~e~~~l~~l-~h~~i~~ 64 (286)
T cd07846 2 KYENLGLVGEGS---------YGMVMKCKHKETGQIV-AIKKFLESEDDK------MVKKIAMREIRMLKQL-RHENLVN 64 (286)
T ss_pred ceeEeeeeccCC---------CeEEEEEEECCCCCEE-EEEeHhhccCcc------hhhHHHHHHHHHHHhc-CCcchhh
Confidence 567777776655 9999999998888877 776521100000 0112345677777665 4468888
Q ss_pred EEEeeecCCeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++++...+.+.|+|||.+..++-+-.......++...+..++.|+++
T Consensus 65 ~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~ 111 (286)
T cd07846 65 LIEVFRRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILR 111 (286)
T ss_pred HHHhcccCCeEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHH
Confidence 88888889999999998876443322223456899999999998764
No 201
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=97.59 E-value=0.00093 Score=51.41 Aligned_cols=100 Identities=20% Similarity=0.078 Sum_probs=70.8
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-C
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL-G 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll-G 114 (143)
.||.||.+.+..++..| ++|.-.. + .. +..........|+.++..+. .++++.++..-..+.+.|+||+.+ |
T Consensus 5 ~~g~vy~~~~~~~~~~~-~ik~~~~--~--~~-~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~ 77 (277)
T cd05577 5 GFGEVCACQVKATGKMY-ACKKLDK--K--RL-KKRKGEQMALNEKKILEKVS-SRFIVSLAYAFETKDDLCLVMTLMNG 77 (277)
T ss_pred CceeEEEEEEcCCCcEE-EEEEEeh--h--hh-hhhhhhHHHHHHHHHHHhCC-CCCEeeeeeEEecCCeEEEEEecCCC
Confidence 48999999999888877 7665321 1 00 01111122345777877764 678888888777788899999988 4
Q ss_pred cCHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 115 PSLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 115 ~sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
.+|.+..... ...++...+..++.|+++
T Consensus 78 ~~L~~~l~~~~~~~~~~~~~~~~~~ql~~ 106 (277)
T cd05577 78 GDLKYHIYNVGEPGFPEARAIFYAAQIIC 106 (277)
T ss_pred CcHHHHHHHcCcCCCCHHHHHHHHHHHHH
Confidence 7999876655 457999999999988764
No 202
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=97.58 E-value=0.0018 Score=48.82 Aligned_cols=109 Identities=14% Similarity=0.077 Sum_probs=72.9
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEE
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEV 96 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l 96 (143)
|++++.++.. +||.||.+.+..+++.+ +++.-.....-. ........|+.++.++. .+++..+
T Consensus 2 y~~~~~lg~g---------~~~~v~~~~~~~~~~~~-~~k~~~~~~~~~------~~~~~~~~e~~~l~~l~-~~~i~~~ 64 (257)
T cd08223 2 YCFVRVVGKG---------SYGEVSLVRHRTDGKQY-VIKKLNLRNASR------RERKAAEQEAQLLSQLK-HPNIVAY 64 (257)
T ss_pred ceEEEEecCC---------CCeEEEEEEEcCCCcEE-EEEEEehhhcCH------HHHHHHHHHHHHHHhCC-CCCeeee
Confidence 5666666543 39999999998888877 665532110000 01123566777777664 4566666
Q ss_pred EEeee-cCCeeEEeeccc-CcCHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 97 YYFGP-CGKYNALVMELL-GPSLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 97 ~~~G~-~~~~~~iVM~Ll-G~sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
+.... .+.+.|+||+.+ |.+|.+..+.. ++.++..++..++.|++.
T Consensus 65 ~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~ 113 (257)
T cd08223 65 RESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAM 113 (257)
T ss_pred eeeecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 65544 355789999998 57898876665 667999999999998764
No 203
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=97.57 E-value=0.00066 Score=53.84 Aligned_cols=99 Identities=17% Similarity=0.102 Sum_probs=68.0
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccC-
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLG- 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG- 114 (143)
.||.||.|.+..++..+ |+|.-.. .. ... .........|..++..+ ..++++.+++....+.+.|+|||.+.
T Consensus 7 ~~g~V~~~~~~~~~~~~-a~K~~~~--~~--~~~-~~~~~~~~~e~~~l~~~-~hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (325)
T cd05594 7 TFGKVILVKEKATGRYY-AMKILKK--EV--IVA-KDEVAHTLTENRVLQNS-RHPFLTALKYSFQTHDRLCFVMEYANG 79 (325)
T ss_pred CCEEEEEEEECCCCCEE-EEEEEEH--HH--hhh-hhHHHHHHHHHHHHHhC-CCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 49999999999988877 7776421 00 000 00011234466655544 34688999999888999999999984
Q ss_pred cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 115 PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 115 ~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.+|.+.... .+.++...+..++.|++.
T Consensus 80 ~~L~~~l~~-~~~l~~~~~~~~~~qi~~ 106 (325)
T cd05594 80 GELFFHLSR-ERVFSEDRARFYGAEIVS 106 (325)
T ss_pred CcHHHHHHh-cCCCCHHHHHHHHHHHHH
Confidence 577665443 467999999999998764
No 204
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=97.56 E-value=0.00034 Score=53.65 Aligned_cols=98 Identities=15% Similarity=0.060 Sum_probs=71.0
Q ss_pred ccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccCcC
Q psy16459 37 FGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLGPS 116 (143)
Q Consensus 37 fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG~s 116 (143)
||.||.+.+.++++.+ ++|.=. ..... ........|+..+.++.+.++++.+++....+...|+|||.++.+
T Consensus 12 ~g~v~~~~~~~~~~~~-~ik~~~--~~~~~-----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 83 (283)
T cd07830 12 FGSVYLARNKETGELV-AIKKMK--KKFYS-----WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYMEGN 83 (283)
T ss_pred ceEEEEEEECCCCcEE-EEEEeh--hhccc-----hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecCCCC
Confidence 8999999998887766 666421 11000 001112346677766664678888888888889999999999999
Q ss_pred HHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 117 LEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 117 L~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
|.+..... +..++...+..++.|+++
T Consensus 84 l~~~~~~~~~~~~~~~~~~~~~~~l~~ 110 (283)
T cd07830 84 LYQLMKDRKGKPFSESVIRSIIYQILQ 110 (283)
T ss_pred HHHHHHhcccccCCHHHHHHHHHHHHH
Confidence 98877665 468999999999999864
No 205
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=97.56 E-value=0.0018 Score=48.93 Aligned_cols=105 Identities=16% Similarity=0.130 Sum_probs=74.1
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
++++.+.++.++ ||.||++.+.. +..+ ++|.-..+ ... .-....|+.++.++. .+++.+
T Consensus 5 ~~~~~~~ig~g~---------~g~v~~~~~~~-~~~~-~~k~~~~~-~~~--------~~~~~~e~~~l~~l~-~~~i~~ 63 (256)
T cd05112 5 ELTLVQEIGSGQ---------FGLVWLGYWLE-KRKV-AIKTIREG-AMS--------EEDFIEEAQVMMKLS-HPKLVQ 63 (256)
T ss_pred HeEEEeeecCcc---------cceEEEEEEeC-CCeE-EEEECCCC-CCC--------HHHHHHHHHHHHhCC-CCCeee
Confidence 567777776544 89999997753 3444 77653211 111 112466888888774 468889
Q ss_pred EEEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHh
Q psy16459 96 VYYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLE 141 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l 141 (143)
+++......+.|+||+.+ |.+|.++.......++...+..++.|++
T Consensus 64 ~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~ 110 (256)
T cd05112 64 LYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVC 110 (256)
T ss_pred EEEEEccCCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHH
Confidence 999988888999999977 5689887765556788888888888765
No 206
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=97.55 E-value=0.0026 Score=47.61 Aligned_cols=98 Identities=15% Similarity=0.099 Sum_probs=70.9
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-C
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL-G 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll-G 114 (143)
.+|.||.+.+..+++.+ ++|.-... ++.+. ....+..|+.++.++. .+++++++.+...+.+.|+||+.. |
T Consensus 12 ~~~~v~~~~~~~~~~~~-~ik~~~~~-~~~~~-----~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~e~~~~ 83 (254)
T cd06627 12 AFGVVYKGLNLETGDFV-AIKQISLE-KIKEE-----ALKSIMQEIDLLKNLK-HPNIVKYIGSIETSDSLYIILEYAEN 83 (254)
T ss_pred CCeEEEEEEEcCCCcEE-EEEEeccc-ccCHH-----HHHHHHHHHHHHHhCC-CCCccEEEEEEEeCCEEEEEEecCCC
Confidence 48999999998888877 66654321 11000 0123566777777764 468899999988889999999988 4
Q ss_pred cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 115 PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 115 ~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.+|.++.... +.++...+..++.|+++
T Consensus 84 ~~L~~~~~~~-~~l~~~~~~~~~~~i~~ 110 (254)
T cd06627 84 GSLRQIIKKF-GPFPESLVAVYVYQVLQ 110 (254)
T ss_pred CcHHHHHHhc-cCCCHHHHHHHHHHHHH
Confidence 6898887654 67899999998888764
No 207
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=97.55 E-value=0.00042 Score=55.44 Aligned_cols=114 Identities=12% Similarity=0.112 Sum_probs=75.7
Q ss_pred cceeeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhc
Q psy16459 10 MSLLKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQS 89 (143)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~ 89 (143)
.+.+..++++...++..+ ||.||.+.+..++..+ ++|.-.. ...+. .....+..|+.++.++ .
T Consensus 10 ~~~~~~~y~~~~~ig~g~---------~g~vy~~~~~~~~~~~-aiK~~~~--~~~~~----~~~~~~~~E~~~l~~l-~ 72 (343)
T cd07851 10 VWEVPDRYQNLSPVGSGA---------YGQVCSAFDTKTGRKV-AIKKLSR--PFQSA----IHAKRTYRELRLLKHM-D 72 (343)
T ss_pred eecccCceEEEEEeccCC---------ceEEEEEEECCCCcEE-EEEeccc--ccchh----hHHHHHHHHHHHHHhc-c
Confidence 344556788888886644 9999999999988877 7775321 11100 0011234577777666 3
Q ss_pred CCcccEEEEeeecC------CeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 90 NKGIPEVYYFGPCG------KYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 90 ~~~~P~l~~~G~~~------~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.+++..+.+....+ ...|+||+.+|.+|.++... ..|+...+..++.|+++
T Consensus 73 h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~--~~l~~~~~~~~~~ql~~ 129 (343)
T cd07851 73 HENVIGLLDVFTPASSLEDFQDVYLVTHLMGADLNNIVKC--QKLSDDHIQFLVYQILR 129 (343)
T ss_pred CCCHHHHHHHhhccccccccccEEEEEecCCCCHHHHHhc--CCCCHHHHHHHHHHHHH
Confidence 34555444443332 34899999999999988764 67999999999998864
No 208
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=97.55 E-value=0.0018 Score=50.03 Aligned_cols=114 Identities=16% Similarity=0.131 Sum_probs=79.1
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCC----CceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhh
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSG----GGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQ 88 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~----~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~ 88 (143)
-..+|++.+.++.++ ||.||++.+.... ....++|.-....+-.+. ..+..|+.++.++.
T Consensus 10 ~~~~~~~~~~ig~g~---------~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~-------~~~~~E~~~l~~l~ 73 (293)
T cd05053 10 PRDRLTLGKPLGEGA---------FGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDL-------SDLVSEMEMMKMIG 73 (293)
T ss_pred CHhHeEEeeEecccc---------cccEEEEEEecCCCCCCceeEEEEEccCCCCHHHH-------HHHHHHHHHHHhhc
Confidence 345677777775544 8999998765433 334477664322111111 12566888888876
Q ss_pred cCCcccEEEEeeecCCeeEEeeccc-CcCHHHHHHh--------------c-CCCCCHHHHHHHHHHHhc
Q psy16459 89 SNKGIPEVYYFGPCGKYNALVMELL-GPSLEDLFDL--------------C-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 89 ~~~~~P~l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~--------------~-~~~fs~~T~~~ia~q~l~ 142 (143)
+.+++.++++....+...++||+.+ |.+|.++.+. . .+.++...++.++.|++.
T Consensus 74 ~h~~i~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~ 143 (293)
T cd05053 74 KHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVAR 143 (293)
T ss_pred CCCCeeeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHH
Confidence 7788999999888888999999986 5699887653 2 467899999999988753
No 209
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=97.54 E-value=0.0014 Score=50.58 Aligned_cols=106 Identities=16% Similarity=0.150 Sum_probs=77.7
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEE
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEV 96 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l 96 (143)
+++...+...+ ||.||.+.+..+++.+ +++.-..... .......|+.++.++. .++++++
T Consensus 21 ~~~~~~l~~g~---------~~~v~~~~~~~~~~~~-~iK~~~~~~~---------~~~~~~~e~~~l~~l~-~~~i~~~ 80 (286)
T cd06614 21 YKNLEKIGEGA---------SGEVYKATDRATGKEV-AIKKMRLRKQ---------NKELIINEILIMKDCK-HPNIVDY 80 (286)
T ss_pred chHhHhccCCC---------CeEEEEEEEccCCcEE-EEEEEecCch---------hHHHHHHHHHHHHHCC-CCCeeEE
Confidence 45555554443 8999999998888777 5554322111 1123556777777664 4689999
Q ss_pred EEeeecCCeeEEeecccC-cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 97 YYFGPCGKYNALVMELLG-PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 97 ~~~G~~~~~~~iVM~LlG-~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+.....+...|+||+.+. .+|.++.......++......++.|++.
T Consensus 81 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~ 127 (286)
T cd06614 81 YDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQ 127 (286)
T ss_pred EEEEEECCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHH
Confidence 999999999999999998 8999987765448999999999988764
No 210
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=97.54 E-value=0.0015 Score=49.70 Aligned_cols=100 Identities=14% Similarity=0.070 Sum_probs=68.0
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCC-HHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPS-LQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL- 113 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~s-l~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll- 113 (143)
.||.||++.+. +++.+ |+|.-....+ ...... ....+..|+.++.++. .+++++++++...+.+.++|||.+
T Consensus 12 ~~~~v~~~~~~-~~~~~-avk~~~~~~~~~~~~~~---~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~ 85 (265)
T cd06631 12 AYGTVYCGLTN-QGQLI-AVKQVELDTSNVLAAEK---EYEKLQEEVDLLKSLK-HVNIVQYLGTCLDDNTISIFMEFVP 85 (265)
T ss_pred CCeEEEEEEEc-CCCeE-EEEEeecCccchhhHHH---HHHHHHHHHHHHHhcC-CCCEeeEeeEeecCCeEEEEEecCC
Confidence 38999999763 44545 7764322111 111111 1123667888777774 468999999999999999999987
Q ss_pred CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 114 GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 114 G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
|.+|.++.+.. +.++...+..++.|+++
T Consensus 86 ~~~L~~~l~~~-~~~~~~~~~~~~~qi~~ 113 (265)
T cd06631 86 GGSISSILNRF-GPLPEPVFCKYTKQILD 113 (265)
T ss_pred CCcHHHHHHhc-CCCCHHHHHHHHHHHHH
Confidence 78999887653 56888888888888753
No 211
>KOG0596|consensus
Probab=97.54 E-value=0.00026 Score=61.00 Aligned_cols=93 Identities=16% Similarity=0.178 Sum_probs=76.7
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCccc
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIP 94 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P 94 (143)
.|++++++++.+|+ .+||+|...++.- |++.+.-+++.+-+.+.. ...|+..+.++.+-..+-
T Consensus 361 ~~Yeilk~iG~GGS---------SkV~kV~~s~~~i-yalkkv~~~~~D~qtl~g-------y~nEI~lL~KLkg~~~II 423 (677)
T KOG0596|consen 361 REYEILKQIGSGGS---------SKVFKVLNSDKQI-YALKKVVLLEADNQTLDG-------YRNEIALLNKLKGHDKII 423 (677)
T ss_pred chhhHHHhhcCCCc---------ceeeeeecCCCcc-hhhhHHHHhhcCHHHHHH-------HHHHHHHHHHhcCCceEE
Confidence 58999999998884 5677777655444 558888887777666543 566999999999998999
Q ss_pred EEEEeeecCCeeEEeecccCcCHHHHHHhc
Q psy16459 95 EVYYFGPCGKYNALVMELLGPSLEDLFDLC 124 (143)
Q Consensus 95 ~l~~~G~~~~~~~iVM~LlG~sL~~l~~~~ 124 (143)
+++++--.+.|-|||||-=.-+|..+.+..
T Consensus 424 qL~DYEv~d~~lYmvmE~Gd~DL~kiL~k~ 453 (677)
T KOG0596|consen 424 QLYDYEVTDGYLYMVMECGDIDLNKILKKK 453 (677)
T ss_pred EEeeeeccCceEEEEeecccccHHHHHHhc
Confidence 999999999999999999888999998765
No 212
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=97.54 E-value=0.0022 Score=49.34 Aligned_cols=109 Identities=14% Similarity=0.067 Sum_probs=72.7
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCC----CCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCC
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDK----PSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNK 91 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~----~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~ 91 (143)
+|++...++.++ ||.||++.+. .+...+ ++|.-....+-... ..+..|+.++.++. .+
T Consensus 6 ~~~~~~~lg~g~---------~g~vy~~~~~~~~~~~~~~~-~ik~~~~~~~~~~~-------~~~~~E~~~l~~l~-h~ 67 (283)
T cd05090 6 AVRFMEELGECA---------FGKIYKGHLYLPGMDHAQLV-AIKTLKDINNPQQW-------GEFQQEASLMAELH-HP 67 (283)
T ss_pred hceeeeeccccC---------CcceEEEEEecCCCCCcceE-EEEeccCCCCHHHH-------HHHHHHHHHHhhCC-CC
Confidence 567777776544 8999998643 333444 66554321111111 12556888877774 57
Q ss_pred cccEEEEeeecCCeeEEeecccC-cCHHHHHHhc----------------CCCCCHHHHHHHHHHHhc
Q psy16459 92 GIPEVYYFGPCGKYNALVMELLG-PSLEDLFDLC----------------NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 92 ~~P~l~~~G~~~~~~~iVM~LlG-~sL~~l~~~~----------------~~~fs~~T~~~ia~q~l~ 142 (143)
++++++++...+...|+|||.+. .+|.++.... ...++..+++.++.|++.
T Consensus 68 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~ 135 (283)
T cd05090 68 NIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAA 135 (283)
T ss_pred CeeeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHH
Confidence 89999999999999999999985 5898876422 124777888888888764
No 213
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=97.53 E-value=0.0013 Score=50.88 Aligned_cols=111 Identities=14% Similarity=0.130 Sum_probs=75.8
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCCC---CCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcc
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDKP---SGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGI 93 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~---~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~ 93 (143)
+++.+.++.++ ||.||.|.+.. ++..+ |+|.-... ..............|+.++.++.+.+++
T Consensus 2 y~~~~~lg~G~---------~g~v~~~~~~~~~~~g~~~-aiK~~~~~----~~~~~~~~~~~~~~e~~~l~~l~~~~~i 67 (290)
T cd05613 2 FELLKVLGTGA---------YGKVFLVRKVSGHDSGKLY-AMKVLKKA----TIVQKAKTTEHTRTERQVLEHIRQSPFL 67 (290)
T ss_pred ceeeeeeccCC---------cceEEEEEeccCCCCCceE-EEEEeehh----hhhhcchHHHHHHHHHHHHHhcccCCCh
Confidence 45666665544 89999988753 55555 77764210 0001111123456788888888777899
Q ss_pred cEEEEeeecCCeeEEeecccC-cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 94 PEVYYFGPCGKYNALVMELLG-PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 94 P~l~~~G~~~~~~~iVM~LlG-~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+.+++....+.+.|+|||.+. .+|.+.... .+.++..++..++.|+++
T Consensus 68 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~ 116 (290)
T cd05613 68 VTLHYAFQTDTKLHLILDYINGGELFTHLSQ-RERFKEQEVQIYSGEIVL 116 (290)
T ss_pred hceeeEeecCCeEEEEEecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHH
Confidence 999988888889999999985 477776544 367888898888887653
No 214
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=97.53 E-value=0.0017 Score=50.44 Aligned_cols=111 Identities=14% Similarity=0.152 Sum_probs=75.8
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCC-------------ceeEEEEecCCCCHHHHHHHhCCCcchHHHH
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGG-------------GYQALVLSLLGPSLQDLFELCGFRFSLKTVL 81 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~-------------~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~ 81 (143)
.+|++.+.++.++ ||.||.+.+.+++. ...++|.-....+- +. ...+..|+
T Consensus 5 ~~~~~~~~lg~G~---------~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~------~~~~~~ei 68 (295)
T cd05097 5 QQLRLKEKLGEGQ---------FGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTK-TA------RNDFLKEI 68 (295)
T ss_pred HhCeehhccCCCC---------CceEEecccccchhhccccCcccCCCceEEEEEecCCCCCH-HH------HHHHHHHH
Confidence 4677888886655 89999988765432 22367665322111 11 11255688
Q ss_pred HHHHhhhcCCcccEEEEeeecCCeeEEeeccc-CcCHHHHHHhcC-----------CCCCHHHHHHHHHHHhc
Q psy16459 82 MIAQQLQSNKGIPEVYYFGPCGKYNALVMELL-GPSLEDLFDLCN-----------RKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 82 ~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~-----------~~fs~~T~~~ia~q~l~ 142 (143)
.++.++. .++++.++++...+...++|||.+ |.+|.++..... ..++..++++++.|+++
T Consensus 69 ~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~ 140 (295)
T cd05097 69 KIMSRLK-NPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIAS 140 (295)
T ss_pred HHHHhCC-CCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHH
Confidence 8887764 468999999999999999999976 579998764321 24678888888888753
No 215
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=97.53 E-value=0.0018 Score=54.58 Aligned_cols=108 Identities=14% Similarity=0.047 Sum_probs=74.8
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEE
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEV 96 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l 96 (143)
|.+.+.++.++ ||.||.+.+..+.+...++|.-.+.. ... ......|+.++..+ .-++++++
T Consensus 69 y~~~~~lg~G~---------~g~vy~a~~~~~~~~~vv~K~~~~~~-~~~-------~~~~~~E~~~l~~l-~Hpniv~~ 130 (478)
T PTZ00267 69 YVLTTLVGRNP---------TTAAFVATRGSDPKEKVVAKFVMLND-ERQ-------AAYARSELHCLAAC-DHFGIVKH 130 (478)
T ss_pred EEEEEEEEeCC---------CcEEEEEEEcCCCCeEEEEEEcccCC-HHH-------HHHHHHHHHHHHhC-CCCCEeEE
Confidence 56666665433 89999999888844443666532211 111 11245677777655 34689999
Q ss_pred EEeeecCCeeEEeeccc-CcCHHHHHHhc---CCCCCHHHHHHHHHHHhc
Q psy16459 97 YYFGPCGKYNALVMELL-GPSLEDLFDLC---NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 97 ~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~---~~~fs~~T~~~ia~q~l~ 142 (143)
++....+.+.|+|||++ |.+|.+..... ...|+...+..++.|++.
T Consensus 131 ~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~ 180 (478)
T PTZ00267 131 FDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVL 180 (478)
T ss_pred EEEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHH
Confidence 99999999999999998 78999765432 346898898888888753
No 216
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=97.53 E-value=0.00061 Score=51.64 Aligned_cols=109 Identities=20% Similarity=0.146 Sum_probs=77.2
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEE
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEV 96 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l 96 (143)
|++.+.++.++ ||.||.+.+..+++.+ ++|.-... .... ....-.+..|+.++.++. .++++.+
T Consensus 2 y~~~~~i~~g~---------~~~v~~~~~~~~~~~~-~ik~~~~~----~~~~-~~~~~~~~~e~~~l~~l~-h~~i~~~ 65 (258)
T cd05578 2 FELLRVIGKGA---------FGKVCIVQKRDTKKMF-AMKYMNKQ----KCVE-KGSVRNVLNERRILQELN-HPFLVNL 65 (258)
T ss_pred ceEEEEeccCC---------CceEEEEEEccCCcEE-EEEEEehh----hhcc-hhHHHHHHHHHHHHHhCC-CCChHHH
Confidence 56677775544 9999999999888887 77654210 0000 001123566778777764 4688888
Q ss_pred EEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 97 YYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 97 ~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+.....+...|+||+.+ |.+|.+..... ..++..++..++.|+++
T Consensus 66 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~ 111 (258)
T cd05578 66 WYSFQDEENMYLVVDLLLGGDLRYHLSQK-VKFSEEQVKFWICEIVL 111 (258)
T ss_pred HHhhcCCCeEEEEEeCCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHH
Confidence 88888889999999987 67888776543 67899999999988764
No 217
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=97.53 E-value=0.00082 Score=61.33 Aligned_cols=111 Identities=20% Similarity=0.170 Sum_probs=78.5
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
.|++.+.++.++ ||.||++.|..++..+ |+|.-....+-.+.. ......|+.++.++. .+++++
T Consensus 3 rYeIi~~LGkGg---------fG~VYlA~d~~tg~~V-AIK~I~~~l~~~e~~-----~~rflrEi~ILs~L~-HPNIVk 66 (932)
T PRK13184 3 RYDIIRLIGKGG---------MGEVYLAYDPVCSRRV-ALKKIREDLSENPLL-----KKRFLREAKIAADLI-HPGIVP 66 (932)
T ss_pred CeEEEEEEecCC---------CEEEEEEEECCCCcEE-EEEEECcccccCHHH-----HHHHHHHHHHHHhCC-CcCcCe
Confidence 577888887655 9999999999998888 777532111100100 112456788777764 468999
Q ss_pred EEEeeecCCeeEEeeccc-CcCHHHHHHhc----------CCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELL-GPSLEDLFDLC----------NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~----------~~~fs~~T~~~ia~q~l~ 142 (143)
+++....+...|+||+.+ |.+|.++.... ...++..+++.++.|+++
T Consensus 67 l~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~ 124 (932)
T PRK13184 67 VYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICA 124 (932)
T ss_pred EEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHH
Confidence 999999999999999987 67999876532 234667788888888653
No 218
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=97.52 E-value=0.0029 Score=48.67 Aligned_cols=108 Identities=19% Similarity=0.157 Sum_probs=74.1
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeecc----CCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCC
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKT----DKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNK 91 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~----d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~ 91 (143)
.+++++.++.++ ||.||.+. +..++..+ ++|.-.. .+.... ..+..|+.++.++. .+
T Consensus 5 ~~~~~~~lg~g~---------~g~v~~~~~~~~~~~~~~~v-~iK~~~~-~~~~~~-------~~~~~e~~~l~~l~-h~ 65 (284)
T cd05081 5 HLKFIQQLGKGN---------FGSVELCRYDPLQDNTGEVV-AVKKLQH-STAEHL-------RDFEREIEILKSLQ-HD 65 (284)
T ss_pred cceeeeeccCCC---------CceEEEEEecCCcCCCCcEE-EEEEecc-CCHHHH-------HHHHHHHHHHHhCC-CC
Confidence 466777776655 89999875 55566666 7765321 111111 13567888877764 56
Q ss_pred cccEEEEeeec--CCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 92 GIPEVYYFGPC--GKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 92 ~~P~l~~~G~~--~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++++++.... +...++|||.+ |.+|.++.......++..++..++.|+++
T Consensus 66 ~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~ 119 (284)
T cd05081 66 NIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICK 119 (284)
T ss_pred CeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHH
Confidence 88888876543 35688999988 78999987665567899999999988764
No 219
>KOG0574|consensus
Probab=97.52 E-value=0.00015 Score=58.82 Aligned_cols=101 Identities=20% Similarity=0.214 Sum_probs=76.1
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEE
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEV 96 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l 96 (143)
|.|+.+++- .+||.||++....++.-. |||-=.+..+|+++.+ |+.++.|. .++++.++
T Consensus 35 FDi~~KLGE---------GSYGSV~KAIH~EsG~v~-AIK~VPV~sDLQEIIK----------EISIMQQC-~S~yVVKY 93 (502)
T KOG0574|consen 35 FDIVGKLGE---------GSYGSVHKAIHRESGHVL-AIKKVPVDTDLQEIIK----------EISIMQQC-KSKYVVKY 93 (502)
T ss_pred HHHHHHhcC---------CcchHHHHHHHhccCcEE-EEEecCccchHHHHHH----------HHHHHHHc-CCchhhhh
Confidence 456666643 349999999999999987 8888788888888765 66676655 34678888
Q ss_pred EEeeecCCeeEEeecccCc-CHHHHHHhcCCCCCHHHHHHHHH
Q psy16459 97 YYFGPCGKYNALVMELLGP-SLEDLFDLCNRKFTLKTVLMIAI 138 (143)
Q Consensus 97 ~~~G~~~~~~~iVM~LlG~-sL~~l~~~~~~~fs~~T~~~ia~ 138 (143)
|+.--.+.--|||||.+|- |++|+.+...+.++-.-+.-+..
T Consensus 94 YGSYFK~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~ 136 (502)
T KOG0574|consen 94 YGSYFKHSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLR 136 (502)
T ss_pred hhhhccCCceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHH
Confidence 7777777789999999995 99999877677777655444433
No 220
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=97.52 E-value=0.0017 Score=49.99 Aligned_cols=95 Identities=17% Similarity=0.152 Sum_probs=68.1
Q ss_pred ccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccC-c
Q psy16459 37 FGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLG-P 115 (143)
Q Consensus 37 fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG-~ 115 (143)
||.||++.+..++..+ |+|.-........ ...+..|+.++.++. .+++.++++....+.+.|+|||.++ .
T Consensus 17 ~~~vy~~~~~~~~~~~-aiK~~~~~~~~~~-------~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~ 87 (277)
T cd06641 17 FGEVFKGIDNRTQKVV-AIKIIDLEEAEDE-------IEDIQQEITVLSQCD-SPYVTKYYGSYLKDTKLWIIMEYLGGG 87 (277)
T ss_pred CeEEEEEEECCCCcEE-EEEEeccccchHH-------HHHHHHHHHHHHhcC-CCCEeEEEEEEEeCCeEEEEEEeCCCC
Confidence 9999999998888877 8876422111111 123556777776653 4688999999999999999999985 4
Q ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 116 SLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 116 sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+|.++.. ...++...+..++.|++.
T Consensus 88 ~l~~~i~--~~~~~~~~~~~~~~~l~~ 112 (277)
T cd06641 88 SALDLLE--PGPLDETQIATILREILK 112 (277)
T ss_pred cHHHHHh--cCCCCHHHHHHHHHHHHH
Confidence 7776644 356888888888888653
No 221
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=97.52 E-value=0.0004 Score=52.30 Aligned_cols=99 Identities=21% Similarity=0.176 Sum_probs=72.1
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-C
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL-G 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll-G 114 (143)
.||.||.+.+..+++.+ ++|.-.. .+... ......+..|..++..+. .++++++++....+...|+||+.+ |
T Consensus 5 ~~~~vy~~~~~~~~~~~-~~k~~~~-~~~~~----~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~ 77 (265)
T cd05579 5 AYGRVFLAKKKSTGDIY-AIKVIKK-ADMIR----KNQVDQVLTERDILSQAQ-SPYVVKLYYSFQGKKNLYLVMEYLPG 77 (265)
T ss_pred CceEEEEEEECCCCCEE-EEEEecc-hhhhh----hhHHHHHHHHHHHHHhCC-CcchhHHHHheecCcEEEEEEecCCC
Confidence 48999999998888877 7775321 11100 011224566777776664 568888888888899999999999 5
Q ss_pred cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 115 PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 115 ~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.+|.++.... +.++..++..++.|+++
T Consensus 78 ~~L~~~l~~~-~~~~~~~~~~i~~qi~~ 104 (265)
T cd05579 78 GDLASLLENV-GSLDEDVARIYIAEIVL 104 (265)
T ss_pred CcHHHHHHHc-CCCCHHHHHHHHHHHHH
Confidence 7999887654 47999999999999864
No 222
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=97.52 E-value=0.00068 Score=52.58 Aligned_cols=111 Identities=22% Similarity=0.211 Sum_probs=76.7
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCccc
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIP 94 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P 94 (143)
.+|++.+.++.. .||.||++.+..++..+ ++|.-..... ..........|+.++..+. .+++.
T Consensus 7 ~~~~~~~~lg~g---------~~g~v~~~~~~~~~~~v-~iK~~~~~~~------~~~~~~~~~~e~~~~~~l~-h~~i~ 69 (302)
T cd07864 7 DKFDIIGQIGEG---------TYGQVYKARDKDTGELV-ALKKVRLDNE------KEGFPITAIREIKILRQLN-HRNIV 69 (302)
T ss_pred hhhheeeeeccc---------CCEEEEEEEECCCCcEE-EEEEEeeccc------ccCchHHHHHHHHHHHhCC-CCCee
Confidence 356777777553 39999999999888776 6665321100 0011224556777777774 45777
Q ss_pred EEEEeeecCC----------eeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 95 EVYYFGPCGK----------YNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 95 ~l~~~G~~~~----------~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++++....+. +.|+||+.++.++.++.......|+...+..++.|++.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~ 127 (302)
T cd07864 70 NLKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLE 127 (302)
T ss_pred eeeheecCcchhhhccccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence 7777765543 78999999998888776654567999999999988764
No 223
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=97.51 E-value=0.0011 Score=52.33 Aligned_cols=98 Identities=21% Similarity=0.142 Sum_probs=67.6
Q ss_pred EccceeeccCC---CCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecc
Q psy16459 36 FFGKVMDKTDK---PSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMEL 112 (143)
Q Consensus 36 ~fG~vy~v~d~---~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~L 112 (143)
.||.||.|.+. .++..+ |+|.-.. + .. ..........|+.++.++. .++++++++....+...|+|||.
T Consensus 8 ~~g~Vy~~~~~~~~~~~~~~-aiK~~~~--~--~~--~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~ 79 (318)
T cd05582 8 SFGKVFLVRKITGPDAGQLY-AMKVLKK--A--TL--KVRDRVRTKMERDILAEVN-HPFIVKLHYAFQTEGKLYLILDF 79 (318)
T ss_pred CCEEEEEEEEeccCCCCCEE-EEEEEEH--H--Hh--hhhhHHHHHHHHHHHHhCC-CCCcccEEEEEEcCCEEEEEEcC
Confidence 48999988764 444555 7765321 0 00 0011223566887777664 56899999999999999999998
Q ss_pred c-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 113 L-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 113 l-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+ |.+|.+.... ...++...+..++.|+++
T Consensus 80 ~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~ 109 (318)
T cd05582 80 LRGGDLFTRLSK-EVMFTEEDVKFYLAELAL 109 (318)
T ss_pred CCCCcHHHHHHH-cCCCCHHHHHHHHHHHHH
Confidence 8 5688776543 467899999999998764
No 224
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=97.51 E-value=0.0015 Score=54.10 Aligned_cols=92 Identities=16% Similarity=0.092 Sum_probs=61.9
Q ss_pred eeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCC----ceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhc
Q psy16459 14 KCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGG----GYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQS 89 (143)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~----~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~ 89 (143)
+.++.+.+.++.++ ||.||++.+..... ...|+|.-. +..... ....+..|+.++..+..
T Consensus 36 ~~~~~~~~~LG~G~---------fG~Vy~~~~~~~~~~~~~~~vavK~l~--~~~~~~-----~~~~~~~Ei~~l~~l~~ 99 (400)
T cd05105 36 RDGLVLGRILGSGA---------FGKVVEGTAYGLSRSQPVMKVAVKMLK--PTARSS-----EKQALMSELKIMTHLGP 99 (400)
T ss_pred ccceehhheecCCC---------CceEEEEEEcccCCCCCceEEEEEecC--CCCChH-----HHHHHHHHHHHHHhcCC
Confidence 34677777776544 99999987644332 123777542 111111 01246678898888866
Q ss_pred CCcccEEEEeeecCCeeEEeeccc-CcCHHHHH
Q psy16459 90 NKGIPEVYYFGPCGKYNALVMELL-GPSLEDLF 121 (143)
Q Consensus 90 ~~~~P~l~~~G~~~~~~~iVM~Ll-G~sL~~l~ 121 (143)
-+++++++++...+...|+|||.+ |.+|.++.
T Consensus 100 HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l 132 (400)
T cd05105 100 HLNIVNLLGACTKSGPIYIITEYCFYGDLVNYL 132 (400)
T ss_pred CCCeeeEEEEEccCCceEEEEEecCCCcHHHHH
Confidence 689999999999889999999997 45776653
No 225
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=97.50 E-value=0.0021 Score=49.15 Aligned_cols=106 Identities=17% Similarity=0.122 Sum_probs=74.6
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCccc
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIP 94 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P 94 (143)
.++.+++.++.++ ||.||.+.+.++.. + ++|.-..... .......|+.++..+. .+++.
T Consensus 6 ~~~~~~~~lg~g~---------~~~v~~~~~~~~~~-v-alK~~~~~~~---------~~~~~~~E~~~l~~l~-~~~i~ 64 (262)
T cd05071 6 ESLRLEVKLGQGC---------FGEVWMGTWNGTTR-V-AIKTLKPGTM---------SPEAFLQEAQVMKKLR-HEKLV 64 (262)
T ss_pred HHeeEeeecCCCC---------CCcEEEEEecCCce-E-EEEecccCcc---------CHHHHHHHHHHHHhCC-CCCcc
Confidence 4578888886644 89999998876643 4 7776431110 0112466888887764 56888
Q ss_pred EEEEeeecCCeeEEeecccC-cCHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 95 EVYYFGPCGKYNALVMELLG-PSLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 95 ~l~~~G~~~~~~~iVM~LlG-~sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
++++... +.+.|+||+.+. .+|.++.... +..++..++..++.|+++
T Consensus 65 ~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~ 113 (262)
T cd05071 65 QLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 113 (262)
T ss_pred eEEEEEC-CCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHH
Confidence 8887754 456799999885 5998887665 567899999999988764
No 226
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=97.50 E-value=0.0012 Score=52.14 Aligned_cols=100 Identities=15% Similarity=0.098 Sum_probs=67.5
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-C
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL-G 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll-G 114 (143)
.||.||++.+..++..+ |+|.=.. ..... ......+..|.....+....++++++++....+...|+|||.+ |
T Consensus 7 ~~g~Vy~~~~~~~~~~~-aiK~~~~----~~~~~-~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 7 SFGKVLLAKRKSDGSFY-AVKVLQK----KTILK-KKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CCEEEEEEEECCCCCEE-EEEEEEH----HHHHH-hhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 49999999999988877 7765311 00000 0001123334444444445678999999988999999999998 4
Q ss_pred cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 115 PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 115 ~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.+|.+.... .+.++...+..++.|+++
T Consensus 81 ~~L~~~l~~-~~~~~~~~~~~~~~qi~~ 107 (321)
T cd05603 81 GELFFHLQR-ERCFLEPRARFYAAEVAS 107 (321)
T ss_pred CCHHHHHHH-cCCCCHHHHHHHHHHHHH
Confidence 577665443 477899999999888764
No 227
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=97.49 E-value=0.00065 Score=51.34 Aligned_cols=92 Identities=10% Similarity=-0.068 Sum_probs=66.2
Q ss_pred EEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccC
Q psy16459 35 YFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLG 114 (143)
Q Consensus 35 ~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG 114 (143)
..||.||.|.|..+++.| ++|.-.... ....|...... ...++++++++.+..+.+.|+|||.+.
T Consensus 4 g~~~~v~~~~~~~~~~~~-~~K~i~~~~-------------~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~lv~e~~~ 68 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTF-ILKGLRKSS-------------EYSRERLTIIP-HCVPNMVCLHKYIVSEDSVFLVLQHAE 68 (237)
T ss_pred cccceEEEEEEccCCcEE-EEEeecchh-------------hhhhHHHHHHh-cCCCceeehhhheecCCeEEEEEecCC
Confidence 458999999999999988 887653210 01122222221 234789999999999999999999884
Q ss_pred -cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 115 -PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 115 -~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.+|.+..... ..++...+..++.|+++
T Consensus 69 ~~~L~~~l~~~-~~l~~~~~~~~~~ql~~ 96 (237)
T cd05576 69 GGKLWSHISKF-LNIPEECVKRWAAEMVV 96 (237)
T ss_pred CCCHHHHHHHh-cCCCHHHHHHHHHHHHH
Confidence 6888876543 45889999999988764
No 228
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=97.48 E-value=0.00067 Score=52.96 Aligned_cols=111 Identities=16% Similarity=0.074 Sum_probs=77.8
Q ss_pred ceeeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcC
Q psy16459 11 SLLKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSN 90 (143)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~ 90 (143)
.....++.+++.++.++ ||.||++.+..+++.+ ++|.-.. .+ .........|+.++..+. .
T Consensus 15 ~~~~~~~~~~~~lg~g~---------~g~v~~~~~~~~~~~v-~iK~~~~----~~----~~~~~~~~~e~~~l~~l~-h 75 (293)
T cd06647 15 GDPKKKYTRFEKIGQGA---------SGTVYTAIDVATGQEV-AIKQMNL----QQ----QPKKELIINEILVMRENK-H 75 (293)
T ss_pred cCchhhceeeeEecCCC---------CeEEEEEEEcCCCCEE-EEEEecc----cc----chHHHHHHHHHHHHhhcC-C
Confidence 33446788888886544 8999999998888877 6665311 00 011122455677766654 4
Q ss_pred CcccEEEEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 91 KGIPEVYYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 91 ~~~P~l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++++.+++....+.+.|+|||.+ |.+|.++... +.++...+..++.|+++
T Consensus 76 p~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~l~~~~~~~i~~~l~~ 126 (293)
T cd06647 76 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQ 126 (293)
T ss_pred CCeeehhheeeeCCcEEEEEecCCCCcHHHHHhh--cCCCHHHHHHHHHHHHH
Confidence 68888888888888999999988 6788887553 56788888888888763
No 229
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=97.47 E-value=0.0014 Score=51.99 Aligned_cols=100 Identities=15% Similarity=0.109 Sum_probs=68.1
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-C
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL-G 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll-G 114 (143)
.||.||++.+..++..+ |+|.=.. ..... ......+..|.....+....++++++++....+...|+|||.+ |
T Consensus 7 ~~g~V~~~~~~~~~~~v-aiK~~~~----~~~~~-~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 7 SFGKVLLAKHKADGKFY-AVKVLQK----KAILK-KKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CCeEEEEEEECCCCCEE-EEEEEEH----HHHhh-hhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 49999999999998877 7775311 11000 0001122334444444455678999999988899999999988 4
Q ss_pred cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 115 PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 115 ~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.+|.+.... .+.++...+..++.|+++
T Consensus 81 g~L~~~l~~-~~~~~~~~~~~~~~qi~~ 107 (323)
T cd05575 81 GELFFHLQR-ERSFPEPRARFYAAEIAS 107 (323)
T ss_pred CCHHHHHHh-cCCCCHHHHHHHHHHHHH
Confidence 578765543 468999999999998764
No 230
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=97.47 E-value=0.0038 Score=47.93 Aligned_cols=110 Identities=12% Similarity=0.057 Sum_probs=72.7
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCc---eeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCC
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGG---YQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNK 91 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~---~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~ 91 (143)
.+|++++.++.++ ||.||++.+..++.. ..|+|+-....+-.. ...+..|..++..+ ..+
T Consensus 7 ~~~~~~~~lg~G~---------~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~-------~~~~~~e~~~l~~~-~~~ 69 (279)
T cd05109 7 TELKKVKVLGSGA---------FGTVYKGIWIPDGENVKIPVAIKVLRENTSPKA-------NKEILDEAYVMAGV-GSP 69 (279)
T ss_pred hheeeeeecCCCC---------CceEEEEEEecCCCccceEEEEEEecCCCCHHH-------HHHHHHHHHHHHhc-CCC
Confidence 3677888886655 999999987666654 237776432111111 11244566665544 457
Q ss_pred cccEEEEeeecCCeeEEeec-ccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 92 GIPEVYYFGPCGKYNALVME-LLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 92 ~~P~l~~~G~~~~~~~iVM~-LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++.+++.+.... .+++|+ .-|.+|.+..+...+.|+..+++.++.|+++
T Consensus 70 ~i~~~~~~~~~~~-~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~ 120 (279)
T cd05109 70 YVCRLLGICLTST-VQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAK 120 (279)
T ss_pred CCceEEEEEcCCC-cEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHH
Confidence 8899988887654 456666 4456888776655568999999999999864
No 231
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=97.47 E-value=0.0015 Score=46.52 Aligned_cols=98 Identities=26% Similarity=0.207 Sum_probs=73.0
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccC-
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLG- 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG- 114 (143)
.+|.||++.+.++++.+ ++|.=.....-. .......|+.++..+.. +++++++.++......+++|+..+
T Consensus 5 ~~~~v~~~~~~~~~~~~-~~K~~~~~~~~~-------~~~~~~~e~~~~~~l~~-~~i~~~~~~~~~~~~~~~~~e~~~~ 75 (215)
T cd00180 5 GFGTVYLARDKKTGKKV-AIKIIKKEDSSS-------LLEELLREIEILKKLNH-PNIVKLYGVFEDENHLYLVMEYCEG 75 (215)
T ss_pred CceEEEEEEecCCCcEE-EEEEeccccchh-------HHHHHHHHHHHHHhcCC-CCeeeEeeeeecCCeEEEEEecCCC
Confidence 37899999998877777 666643211100 01235667887777755 799999999999999999999999
Q ss_pred cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 115 PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 115 ~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.+|.++.......++...+..++.|+++
T Consensus 76 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 103 (215)
T cd00180 76 GSLKDLLKENEGKLSEDEILRILLQILE 103 (215)
T ss_pred CcHHHHHHhccCCCCHHHHHHHHHHHHH
Confidence 8999987654356888888888887753
No 232
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=97.46 E-value=0.0011 Score=52.81 Aligned_cols=108 Identities=14% Similarity=0.130 Sum_probs=74.5
Q ss_pred eeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEec-CCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCc
Q psy16459 14 KCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSL-LGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKG 92 (143)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~El-lg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~ 92 (143)
..+|++.+.++.++ ||.||.+.+..++..+ |+|.-. ...+ .. ......|+.++.++. .++
T Consensus 4 ~~~y~i~~~lg~G~---------~g~vy~~~~~~~~~~v-aiK~~~~~~~~--~~------~~~~~~E~~~l~~l~-h~n 64 (336)
T cd07849 4 GPRYQNLSYIGEGA---------YGMVCSATHKPTGVKV-AIKKISPFEHQ--TF------CQRTLREIKILRRFK-HEN 64 (336)
T ss_pred ccceEEEEEEEecC---------CeEEEEEEEcCCCCeE-EEEEecccccc--hh------HHHHHHHHHHHHhCC-CCC
Confidence 35788888886654 8999999999998887 666431 1100 00 112345777777775 456
Q ss_pred ccEEEEeeecC-----CeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 93 IPEVYYFGPCG-----KYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 93 ~P~l~~~G~~~-----~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+.++++..... ...|+||+.++.+|.++.+ .+.|+...+..++.|+++
T Consensus 65 iv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~--~~~l~~~~~~~i~~ql~~ 117 (336)
T cd07849 65 IIGILDIIRPPSFESFNDVYIVQELMETDLYKLIK--TQHLSNDHIQYFLYQILR 117 (336)
T ss_pred cCchhheeecccccccceEEEEehhcccCHHHHHh--cCCCCHHHHHHHHHHHHH
Confidence 77776654433 3579999999988876654 467999999999988764
No 233
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=97.46 E-value=0.0024 Score=50.12 Aligned_cols=99 Identities=15% Similarity=0.043 Sum_probs=70.4
Q ss_pred EccceeeccCCCCCCceeEEEEe-cCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccC
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLS-LLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLG 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~E-llg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG 114 (143)
+||.||++.+..+++.+ +++.- ......... ...+..|+.++..+. -+++..++++...+...|+|||.++
T Consensus 27 ~~g~v~~~~~~~~~~~~-~ik~~~~~~~~~~~~------~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~ 98 (308)
T cd06634 27 SFGAVYFARDVRNSEVV-AIKKMSYSGKQSNEK------WQDIIKEVRFLQKLR-HPNTIQYRGCYLREHTAWLVMEYCL 98 (308)
T ss_pred CCEEEEEEEEcCCCcEE-EEEEEecccccChHH------HHHHHHHHHHHHhCC-CCCcccEEEEEEcCCeeEEEEEccC
Confidence 48999999999888877 66543 211111111 112345777777663 4578888888888889999999999
Q ss_pred cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 115 PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 115 ~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.++.++.....+.++..++..++.|++.
T Consensus 99 ~~l~~~~~~~~~~l~~~~~~~~~~~l~~ 126 (308)
T cd06634 99 GSASDLLEVHKKPLQEVEIAAVTHGALQ 126 (308)
T ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHH
Confidence 8998877655567899999988888753
No 234
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=97.45 E-value=0.0013 Score=50.01 Aligned_cols=101 Identities=16% Similarity=0.099 Sum_probs=71.4
Q ss_pred EccceeeccCCCCCCceeEEEEecCCC-CHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGP-SLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL- 113 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~-sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll- 113 (143)
.||.||.+.+..+++.+ ++|.-.... +...-.+ ....+..|+.++..+. .++++++++....+...++||+..
T Consensus 12 ~~~~v~~~~~~~~~~~~-alk~~~~~~~~~~~~~~---~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~v~e~~~ 86 (268)
T cd06630 12 AFSSCYQARDVKTGTLM-AVKQVTYVRNTSSEQEE---VVEALRKEIRLMARLN-HPHIIRMLGATCEDSHFNLFVEWMA 86 (268)
T ss_pred CceEEEEEEEcCCCcEE-EEEEeecccCCchhHHH---HHHHHHHHHHHHHHcC-CCceehhhceeccCCeEEEEEeccC
Confidence 49999999999888887 776542211 1110000 1234677888888764 468888898888888889999975
Q ss_pred CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 114 GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 114 G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
|.+|.++.+.. +.++...+..++.|+++
T Consensus 87 ~~~L~~~l~~~-~~~~~~~~~~~~~ql~~ 114 (268)
T cd06630 87 GGSVSHLLSKY-GAFKEAVIINYTEQLLR 114 (268)
T ss_pred CCcHHHHHHHh-CCCCHHHHHHHHHHHHH
Confidence 57899876653 67888999998888764
No 235
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=97.45 E-value=0.0015 Score=52.35 Aligned_cols=92 Identities=13% Similarity=0.106 Sum_probs=60.2
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCC----CCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCC
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKP----SGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNK 91 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~----~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~ 91 (143)
+|.+.+.++.++ ||.||++.+.+ ......|+|+-......... ..+..|+.++.++...+
T Consensus 8 ~~~~~~~lG~G~---------fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~-------~~~~~E~~~l~~l~~h~ 71 (343)
T cd05103 8 RLKLGKPLGRGA---------FGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH-------RALMSELKILIHIGHHL 71 (343)
T ss_pred HhcccccccCCc---------cceEEEEeeccCCccccceeEEEEEeccCCChHHH-------HHHHHHHHHHHhccCCc
Confidence 577788886655 99999997532 22234488876432221111 13556888888886667
Q ss_pred cccEEEEeee-cCCeeEEeecccC-cCHHHHHHh
Q psy16459 92 GIPEVYYFGP-CGKYNALVMELLG-PSLEDLFDL 123 (143)
Q Consensus 92 ~~P~l~~~G~-~~~~~~iVM~LlG-~sL~~l~~~ 123 (143)
++.+++++.. .+.+.++|||.+. .+|.++...
T Consensus 72 niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~ 105 (343)
T cd05103 72 NVVNLLGACTKPGGPLMVIVEFCKFGNLSNYLRS 105 (343)
T ss_pred cHhhhcceeecCCCceEEEEeccCCCcHHHHHHh
Confidence 7888876544 4567899999985 588877543
No 236
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=97.45 E-value=0.0028 Score=48.62 Aligned_cols=109 Identities=15% Similarity=0.120 Sum_probs=74.4
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCC-----CceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcC
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSG-----GGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSN 90 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~-----~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~ 90 (143)
.|++++.++.++ ||.||.+.+..++ ..+ ++|.-... ...+. ...+..|+.++.++. .
T Consensus 6 ~~~~~~~lg~G~---------~g~Vy~~~~~~~~~~~~~~~v-~~K~~~~~-~~~~~------~~~~~~ei~~l~~l~-h 67 (283)
T cd05048 6 AVRFLEELGEGA---------FGKVYKGELTGPNERLSATSV-AIKTLKEN-AEPKV------QQEFRQEAELMSDLQ-H 67 (283)
T ss_pred HcchhhcccCcc---------CCcEEEEEEecCCCCcceeeE-EEEecccC-CCHHH------HHHHHHHHHHHHhcC-C
Confidence 466777775544 8999999876655 223 55543211 11111 113566888777653 5
Q ss_pred CcccEEEEeeecCCeeEEeeccc-CcCHHHHHHhc-C--------------CCCCHHHHHHHHHHHhc
Q psy16459 91 KGIPEVYYFGPCGKYNALVMELL-GPSLEDLFDLC-N--------------RKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 91 ~~~P~l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~-~--------------~~fs~~T~~~ia~q~l~ 142 (143)
+++.+++++...+...+++||.. |.+|.+..... . ..++..++..++.|+++
T Consensus 68 ~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~ 135 (283)
T cd05048 68 PNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAA 135 (283)
T ss_pred cccceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHH
Confidence 68999999988888999999988 46898876543 1 56889999999998864
No 237
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=97.43 E-value=0.0023 Score=51.46 Aligned_cols=110 Identities=15% Similarity=0.020 Sum_probs=73.8
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCc
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKG 92 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~ 92 (143)
+-.++++++.++.++ ||.||.+.|..++..+ |+|.-.....-.. .......|+.++..+. .++
T Consensus 19 ~~~~y~~~~~lg~G~---------~g~V~~~~~~~~~~~v-avK~~~~~~~~~~------~~~~~~~E~~~l~~l~-h~n 81 (359)
T cd07876 19 VLKRYQQLKPIGSGA---------QGIVCAAFDTVLGINV-AVKKLSRPFQNQT------HAKRAYRELVLLKCVN-HKN 81 (359)
T ss_pred hhhceEEEEEeecCC---------CEEEEEEEEcCCCcee-EEEEecccccchh------HHHHHHHHHHHHHhCC-CCC
Confidence 334899999987655 9999999999998888 7775321110000 0112345777766553 457
Q ss_pred ccEEEEeeecC------CeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 93 IPEVYYFGPCG------KYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 93 ~P~l~~~G~~~------~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+.++++....+ ...|+||++++.+|.+... ..++...+..++.|+++
T Consensus 82 iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~---~~~~~~~~~~~~~qi~~ 134 (359)
T cd07876 82 IISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIH---MELDHERMSYLLYQMLC 134 (359)
T ss_pred EeeeeeeeccCCCccccceeEEEEeCCCcCHHHHHh---ccCCHHHHHHHHHHHHH
Confidence 77777765432 3569999999988776542 45788888888888764
No 238
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=97.43 E-value=0.0013 Score=52.72 Aligned_cols=121 Identities=14% Similarity=0.100 Sum_probs=80.8
Q ss_pred ccccccccceeeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHH
Q psy16459 3 RTSTLTSMSLLKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLM 82 (143)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~ 82 (143)
|.++..++-.+...+++.+.++.++ ||.||++.+..++..+ |+|.-... ..+.. .......|+.
T Consensus 5 ~~~~~~~~~~~~~~y~~~~~lg~G~---------~g~v~~~~~~~~~~~v-aiK~~~~~--~~~~~----~~~~~~~Ei~ 68 (345)
T cd07877 5 RQELNKTIWEVPERYQNLSPVGSGA---------YGSVCAAFDTKTGLRV-AVKKLSRP--FQSII----HAKRTYRELR 68 (345)
T ss_pred hhhHHHHHhhccCceEEEEEeeecC---------CeEEEEEEEcCCCeEE-EEEEecCc--chhhH----HHHHHHHHHH
Confidence 4455555566667788888886654 9999999999888877 66644221 11110 0112445777
Q ss_pred HHHhhhcCCcccEEEEeeec------CCeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 83 IAQQLQSNKGIPEVYYFGPC------GKYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 83 v~~ql~~~~~~P~l~~~G~~------~~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++.++.. +++.++++.... ....|+++++.|.+|.++++. +.++..++..++.|+++
T Consensus 69 ~l~~l~h-~~iv~~~~~~~~~~~~~~~~~~~lv~~~~~~~L~~~~~~--~~l~~~~~~~i~~qi~~ 131 (345)
T cd07877 69 LLKHMKH-ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQILR 131 (345)
T ss_pred HHHHcCC-CcccceeeeeeecccccccccEEEEehhcccCHHHHHhc--CCCCHHHHHHHHHHHHH
Confidence 7776643 456555554322 245789999999999987653 57999999999988764
No 239
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=97.43 E-value=0.0038 Score=48.32 Aligned_cols=109 Identities=19% Similarity=0.109 Sum_probs=73.5
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
+|++...++.++ +|.||.+.+..++..+ +++.-....+- +. .-.+..|+.++..+ +.+++..
T Consensus 2 ~~~~~~~lg~g~---------~~~v~~~~~~~~~~~~-~~k~~~~~~~~-~~------~~~~~~e~~~l~~l-~h~~iv~ 63 (287)
T cd06621 2 KIVELSRLGEGA---------GGSVTKCRLKNTGMIF-ALKTITTDPNP-DL------QKQILRELEINKSC-KSPYIVK 63 (287)
T ss_pred ceEEEEEeccCC---------ceEEEEEEECCCCeEE-EEEEEecCCch-HH------HHHHHHHHHHHHhC-CCCCeee
Confidence 456666665533 8999999999888877 77754322111 11 11245677777666 3567777
Q ss_pred EEEeee--cCCeeEEeeccc-CcCHHHHHHhc---CCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGP--CGKYNALVMELL-GPSLEDLFDLC---NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~--~~~~~~iVM~Ll-G~sL~~l~~~~---~~~fs~~T~~~ia~q~l~ 142 (143)
++.+-. .+...|+|||.+ |.+|.++.... ...++...+..++.|+++
T Consensus 64 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~ 116 (287)
T cd06621 64 YYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLK 116 (287)
T ss_pred eeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 776543 344679999998 67999875432 567899999999998754
No 240
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=97.43 E-value=0.0036 Score=47.52 Aligned_cols=107 Identities=17% Similarity=0.139 Sum_probs=73.8
Q ss_pred eeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcc
Q psy16459 14 KCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGI 93 (143)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~ 93 (143)
+..|++.++++.++ ||.||+|.+.++ +.+ |+|.-.... . .......|+.++..+. .+++
T Consensus 5 ~~~~~~~~~ig~G~---------~g~v~~~~~~~~-~~~-a~K~~~~~~-~--------~~~~~~~E~~~l~~l~-h~~i 63 (260)
T cd05067 5 RETLKLVKKLGAGQ---------FGEVWMGYYNGH-TKV-AIKSLKQGS-M--------SPEAFLAEANLMKQLQ-HPRL 63 (260)
T ss_pred hHHceeeeeeccCc---------cceEEeeecCCC-ceE-EEEEecCCC-C--------cHHHHHHHHHHHHhcC-CcCe
Confidence 34577778886655 999999987543 445 776532111 0 1113456888887775 4578
Q ss_pred cEEEEeeecCCeeEEeeccc-CcCHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 94 PEVYYFGPCGKYNALVMELL-GPSLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 94 P~l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
.++++.. .+.+.++||+.+ |.+|.++.... +..++...+..++.|++.
T Consensus 64 ~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~ 113 (260)
T cd05067 64 VRLYAVV-TQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAE 113 (260)
T ss_pred eeEEEEE-ccCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence 8888775 445689999977 67999887665 678999999999888764
No 241
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=97.42 E-value=0.0037 Score=47.68 Aligned_cols=100 Identities=20% Similarity=0.145 Sum_probs=68.0
Q ss_pred EccceeeccCCCCCCceeEEEEecCC-CCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeec--CCeeEEeecc
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLG-PSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPC--GKYNALVMEL 112 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg-~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~--~~~~~iVM~L 112 (143)
.||.||++.+..++..+ +++.-... .+.... + ....+..|+.++.++. .+++..++++... +...+++|+.
T Consensus 14 ~~g~vy~~~~~~~~~~~-~~k~~~~~~~~~~~~-~---~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~~l~~e~ 87 (266)
T cd06651 14 AFGRVYLCYDVDTGREL-AAKQVQFDPESPETS-K---EVSALECEIQLLKNLQ-HERIVQYYGCLRDRAEKTLTIFMEY 87 (266)
T ss_pred CCEEEEEEEEcCCCcEE-EEEEeecCcCCchhH-H---HHHHHHHHHHHHHHcC-CCCeeeEEEEEEcCCCCEEEEEEeC
Confidence 38999999999998887 66543211 111110 0 0123677888887774 5678888877654 4678899998
Q ss_pred c-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 113 L-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 113 l-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+ |.+|.+..... +.++......++.|+++
T Consensus 88 ~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~ 117 (266)
T cd06651 88 MPGGSVKDQLKAY-GALTESVTRKYTRQILE 117 (266)
T ss_pred CCCCcHHHHHHHc-CCCCHHHHHHHHHHHHH
Confidence 8 56898876543 56888888888888753
No 242
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=97.42 E-value=0.0014 Score=50.62 Aligned_cols=111 Identities=14% Similarity=0.090 Sum_probs=74.0
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCCC---CCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcc
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDKP---SGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGI 93 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~---~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~ 93 (143)
+++.+.++..+ ||.||.+.+.. ++..+ +++.-.. + ..............|+.++.++.+.+++
T Consensus 2 ~~~~~~ig~G~---------~~~vy~~~~~~~~~~~~~~-avk~~~~--~--~~~~~~~~~~~~~~E~~~l~~~~~~~~i 67 (288)
T cd05583 2 FELLRVLGTGA---------YGKVFLVRKVGGHDAGKLY-AMKVLKK--A--TIVQKAKTAEHTRTERQVLEAVRRCPFL 67 (288)
T ss_pred ceEEEEeccCC---------CceEEEEEEeccccCCcEE-EEEEEeh--H--HHHhhhhHHHHHHHHHHHHHhccCCcch
Confidence 45666665543 89999887643 34445 6665321 0 0000001112356788899888888889
Q ss_pred cEEEEeeecCCeeEEeecccC-cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 94 PEVYYFGPCGKYNALVMELLG-PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 94 P~l~~~G~~~~~~~iVM~LlG-~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+.++.....+...|+|||.+. .+|.+.... .+.|+...+..++.|+++
T Consensus 68 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~ql~~ 116 (288)
T cd05583 68 VTLHYAFQTDTKLHLILDYVNGGELFTHLYQ-REHFTESEVRVYIAEIVL 116 (288)
T ss_pred hhhheeeecCCEEEEEEecCCCCcHHHHHhh-cCCcCHHHHHHHHHHHHH
Confidence 999888888899999999885 477765443 367899999988888763
No 243
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=97.42 E-value=0.0034 Score=47.23 Aligned_cols=97 Identities=19% Similarity=0.185 Sum_probs=68.2
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-C
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL-G 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll-G 114 (143)
.||.||++.+. ++..+ ++|....... ... ......|+.++.++ ..++++++++........++|||.+ |
T Consensus 7 ~~g~vy~~~~~-~~~~~-a~K~~~~~~~-~~~------~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~ 76 (250)
T cd05085 7 NFGEVFKGTLK-DKTPV-AVKTCKEDLP-QEL------KIKFLSEARILKQY-DHPNIVKLIGVCTQRQPIYIVMELVPG 76 (250)
T ss_pred CCceEEEEEec-CCcEE-EEEecCCcCC-HHH------HHHHHHHHHHHHhC-CCCCcCeEEEEEecCCccEEEEECCCC
Confidence 38999999754 44445 8876532211 111 11245677777665 5678999999999989999999987 5
Q ss_pred cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 115 PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 115 ~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.+|.+........++..++..++.|+++
T Consensus 77 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~ 104 (250)
T cd05085 77 GDFLSFLRKKKDELKTKQLVKFALDAAA 104 (250)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 7888876554556888999988888653
No 244
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=97.42 E-value=0.0014 Score=49.22 Aligned_cols=98 Identities=18% Similarity=0.167 Sum_probs=70.2
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCC---HHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecc
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPS---LQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMEL 112 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~s---l~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~L 112 (143)
.||.||++.+..+++.+ ++|.-..... ..+. ...+..|+.++..+ ..+++.++++....+...|+|||.
T Consensus 12 ~~~~vy~~~~~~~~~~~-~ik~~~~~~~~~~~~~~------~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e~ 83 (258)
T cd06632 12 SFGSVYEGLNLDDGDFF-AVKEVSLADDGQTGQEA------VKQLEQEIALLSKL-QHPNIVQYLGTEREEDNLYIFLEL 83 (258)
T ss_pred CCceEEEEEEcCCCcEE-EEEEEEEccccccchHH------HHHHHHHHHHHHhc-CCCCchheeeeEecCCeEEEEEEe
Confidence 48999999998888777 7776432111 0111 11356677777666 446888999998888999999999
Q ss_pred c-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 113 L-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 113 l-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+ |.+|.++.... +.++...+..++.|+++
T Consensus 84 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~ 113 (258)
T cd06632 84 VPGGSLAKLLKKY-GSFPEPVIRLYTRQILL 113 (258)
T ss_pred cCCCcHHHHHHhc-CCCCHHHHHHHHHHHHH
Confidence 8 57999886653 56888888888887653
No 245
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=97.41 E-value=0.0038 Score=48.32 Aligned_cols=110 Identities=15% Similarity=0.152 Sum_probs=71.3
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCC----CCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcC
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKP----SGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSN 90 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~----~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~ 90 (143)
.+|++.+.++.++ ||.||++.+.+ ..+...++|.-....+.... .....|+.++..+ ..
T Consensus 6 ~~~~i~~~lg~G~---------~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~-------~~~~~e~~~l~~l-~~ 68 (288)
T cd05061 6 EKITLLRELGQGS---------FGMVYEGNARDIIKGEAETRVAVKTVNESASLRER-------IEFLNEASVMKGF-TC 68 (288)
T ss_pred HHceeeeeecCCC---------CcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHH-------HHHHHHHHHHHhC-CC
Confidence 3677888886655 89999875432 22223366653221111111 1234566666555 46
Q ss_pred CcccEEEEeeecCCeeEEeeccc-CcCHHHHHHhcC---------CCCCHHHHHHHHHHHh
Q psy16459 91 KGIPEVYYFGPCGKYNALVMELL-GPSLEDLFDLCN---------RKFTLKTVLMIAIQLE 141 (143)
Q Consensus 91 ~~~P~l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~---------~~fs~~T~~~ia~q~l 141 (143)
+++++++++...+...|+|||++ |.+|.+..+... ..++...+..++.|++
T Consensus 69 ~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 129 (288)
T cd05061 69 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 129 (288)
T ss_pred CCeeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHH
Confidence 79999999999889999999997 579998865431 2346677788887764
No 246
>KOG0661|consensus
Probab=97.41 E-value=9.2e-05 Score=62.56 Aligned_cols=110 Identities=17% Similarity=0.103 Sum_probs=83.4
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEE-EEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcc
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQAL-VLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGI 93 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~-~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~ 93 (143)
.++.++++++++- ||.||++..+.+++.+ |+ +|---=.+.++ ..--.|++.+.++..-+++
T Consensus 10 ~RY~~i~klGDGT---------fGsV~la~~~~~~~~V-AIK~MK~Kf~s~ee--------~~nLREvksL~kln~hpni 71 (538)
T KOG0661|consen 10 DRYTVIRKLGDGT---------FGSVYLAKSKETGELV-AIKKMKKKFYSWEE--------CMNLREVKSLRKLNPHPNI 71 (538)
T ss_pred HHHHHHHHhcCCc---------ceeEEEeeecCCCcee-eHHHHHhhhccHHH--------HHHHHHHHHHHhcCCCCcc
Confidence 3677888887644 9999999999999987 54 33210011111 1223467777777666788
Q ss_pred cEEEEeeecCC-eeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 94 PEVYYFGPCGK-YNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 94 P~l~~~G~~~~-~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
-+++..=.+.+ .-|+|||.+..||-+|.+..++-||..++-.|..|+++
T Consensus 72 ikL~Evi~d~~~~L~fVfE~Md~NLYqLmK~R~r~fse~~irnim~Qilq 121 (538)
T KOG0661|consen 72 IKLKEVIRDNDRILYFVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQ 121 (538)
T ss_pred hhhHHHhhccCceEeeeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHH
Confidence 88888888766 89999999999999998887899999999999999874
No 247
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=97.40 E-value=0.00053 Score=52.71 Aligned_cols=107 Identities=19% Similarity=0.134 Sum_probs=75.1
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
.+++++.++.++ ||.||++.+..++..+ ++|.-..... ... ...+..|+.++..+ ..++++.
T Consensus 5 ~y~~~~~l~~g~---------~~~vy~~~~~~~~~~v-aiK~~~~~~~-~~~------~~~~~~e~~~l~~l-~h~~i~~ 66 (277)
T cd06642 5 LFTKLERIGKGS---------FGEVYKGIDNRTKEVV-AIKIIDLEEA-EDE------IEDIQQEITVLSQC-DSPYITR 66 (277)
T ss_pred HHHHHHHhcCCC---------CeeEEEEEEcCCCeEE-EEEEeccccc-hHH------HHHHHHHHHHHHcC-CCCccHh
Confidence 445555664433 8999999988877766 7776421111 111 12466788877765 4568999
Q ss_pred EEEeeecCCeeEEeecccC-cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELLG-PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~LlG-~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++....+.+.|+|||.++ .+|.+... .+.++...+..++.|+++
T Consensus 67 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~i~~ 112 (277)
T cd06642 67 YYGSYLKGTKLWIIMEYLGGGSALDLLK--PGPLEETYIATILREILK 112 (277)
T ss_pred hhcccccCCceEEEEEccCCCcHHHHhh--cCCCCHHHHHHHHHHHHH
Confidence 9999999999999999996 57877654 467888898888888753
No 248
>KOG0598|consensus
Probab=97.40 E-value=0.00087 Score=54.83 Aligned_cols=105 Identities=17% Similarity=0.138 Sum_probs=74.9
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhC--CCcchHHHHHHHHhhhcCCcc
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCG--FRFSLKTVLMIAQQLQSNKGI 93 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~--~~~sL~tE~~v~~ql~~~~~~ 93 (143)
-|++++.++.++ ||+||.|...+|++-| |||.= . ..+... ..-....|..|+.. ...|.+
T Consensus 26 dF~~lkviGkG~---------fGkV~~Vrk~dt~kiY-AmKvl------~-K~~iv~~~e~~~~~~Er~IL~~-v~hPFi 87 (357)
T KOG0598|consen 26 DFEILKVIGKGS---------FGKVFQVRKKDTGKIY-AMKVL------K-KKKIVEKKEVRHTKAERNILSK-IKHPFI 87 (357)
T ss_pred heeeeeeeeccC---------CceEEEEEEcccCcee-ehhhh------h-hhHhhhhhhHHHHHHHHHHHHh-CCCCcE
Confidence 688898886644 9999999999888877 88651 0 011111 24456788888887 566788
Q ss_pred cEEEEeeecCCeeEEeecccCc-CHHHHHHhcCCCCCHHHHHHHHHH
Q psy16459 94 PEVYYFGPCGKYNALVMELLGP-SLEDLFDLCNRKFTLKTVLMIAIQ 139 (143)
Q Consensus 94 P~l~~~G~~~~~~~iVM~LlG~-sL~~l~~~~~~~fs~~T~~~ia~q 139 (143)
..++..=+++..-|+|+|++.- .|-...++ .++|+-.++---+.+
T Consensus 88 v~l~ysFQt~~kLylVld~~~GGeLf~hL~~-eg~F~E~~arfYlaE 133 (357)
T KOG0598|consen 88 VKLIYSFQTEEKLYLVLDYLNGGELFYHLQR-EGRFSEDRARFYLAE 133 (357)
T ss_pred eeeEEecccCCeEEEEEeccCCccHHHHHHh-cCCcchhHHHHHHHH
Confidence 8999998999999999999864 44433222 689999877544433
No 249
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=97.39 E-value=0.0037 Score=49.18 Aligned_cols=110 Identities=12% Similarity=0.030 Sum_probs=73.4
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCc---eeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCc
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGG---YQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKG 92 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~---~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~ 92 (143)
+|++++.++.++ ||.||++.+..++.. ..|+|.-....+-.. ......|+.++..+ ..++
T Consensus 8 ~f~~~~~lg~G~---------~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~-------~~~~~~e~~~l~~l-~h~n 70 (316)
T cd05108 8 EFKKIKVLGSGA---------FGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-------NKEILDEAYVMASV-DNPH 70 (316)
T ss_pred hceeeeeeecCC---------CceEEEEEEecCCCccceeEEEEeccccCCHHH-------HHHHHHHHHHHHhC-CCCC
Confidence 678888886655 999999987665554 136666421111111 11244566666655 4568
Q ss_pred ccEEEEeeecCCeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 93 IPEVYYFGPCGKYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 93 ~P~l~~~G~~~~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+.+++++...+...++.+..-+.+|.+..+.....++....+.++.|++.
T Consensus 71 iv~~~g~~~~~~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~ 120 (316)
T cd05108 71 VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 120 (316)
T ss_pred CCeEEEEEcCCCceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHH
Confidence 99999988877665555556677888876665567889999999988764
No 250
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=97.38 E-value=0.00074 Score=53.69 Aligned_cols=110 Identities=15% Similarity=0.119 Sum_probs=75.3
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCccc
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIP 94 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P 94 (143)
.+|++...++..+ ||.||.+.+..++..+ ++|.-.. +.. ..........|+.++.++. .++++
T Consensus 5 ~~y~~~~~lg~g~---------~g~v~~~~~~~~~~~v-alK~~~~--~~~----~~~~~~~~~~e~~~l~~l~-h~~iv 67 (334)
T cd07855 5 SRYKPIENIGSGA---------YGVVCSAIDTRSGKKV-AIKKIPH--AFD----VPTLAKRTLRELKILRHFK-HDNII 67 (334)
T ss_pred hceeeeeeeecCC---------CeEEEEEEEcCCCCEE-EEEEecc--ccc----cccchHHHHHHHHHHHhcC-CCCcc
Confidence 4677777775544 8999999999998888 7764321 100 0011123456788877775 45666
Q ss_pred EEEEee----ecCCeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 95 EVYYFG----PCGKYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 95 ~l~~~G----~~~~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++++.. ....+.|+||+.++.+|.+.... .+.++..++..++.|+++
T Consensus 68 ~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~-~~~~~~~~~~~i~~qi~~ 118 (334)
T cd07855 68 AIRDILRPPGADFKDVYVVMDLMESDLHHIIHS-DQPLTEEHIRYFLYQLLR 118 (334)
T ss_pred CHHHhccccCCCCceEEEEEehhhhhHHHHhcc-CCCCCHHHHHHHHHHHHH
Confidence 665543 23467899999999888877654 466999999999999864
No 251
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=97.38 E-value=0.005 Score=46.54 Aligned_cols=103 Identities=14% Similarity=0.164 Sum_probs=71.8
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
.+++.+.++.++ ||.||.+.. ++..+ ++|....... ......|+.++.++. .+++++
T Consensus 7 ~~~~~~~lg~g~---------~g~v~~~~~--~~~~~-~iK~~~~~~~----------~~~~~~e~~~l~~~~-~~~i~~ 63 (254)
T cd05083 7 KLTLGEIIGEGE---------FGAVLQGEY--TGQKV-AVKNIKCDVT----------AQAFLEETAVMTKLH-HKNLVR 63 (254)
T ss_pred HceeeeeeccCC---------CCceEeccc--CCCce-EEEeecCcch----------HHHHHHHHHHHHhCC-CCCcCe
Confidence 466777776544 899998764 44445 7877532111 123456777776664 568888
Q ss_pred EEEeeecCCeeEEeeccc-CcCHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELL-GPSLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
+++....+. .|+||+.+ |.+|.++.... ...++..++..++.|+++
T Consensus 64 ~~~~~~~~~-~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~ 111 (254)
T cd05083 64 LLGVILHNG-LYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAE 111 (254)
T ss_pred EEEEEcCCC-cEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHH
Confidence 888876654 68999987 57999887765 567999999999998764
No 252
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=97.37 E-value=0.00091 Score=53.29 Aligned_cols=109 Identities=15% Similarity=0.105 Sum_probs=73.8
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCccc
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIP 94 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P 94 (143)
..|.+++.++.++ ||.||++.+..+++.+ |+|.-. .+..+.. .......|+.++.++.. +++.
T Consensus 15 ~~y~~~~~lg~G~---------~g~V~~~~~~~~~~~v-avK~~~--~~~~~~~----~~~~~~~E~~~l~~l~h-~~iv 77 (343)
T cd07878 15 ERYQNLTPVGSGA---------YGSVCSAYDTRLRQKV-AVKKLS--RPFQSLI----HARRTYRELRLLKHMKH-ENVI 77 (343)
T ss_pred hhhhhheecccCC---------CeEEEEEEECCCCCEE-EEEEeC--chhhhhH----HHHHHHHHHHHHHhcCC-Cchh
Confidence 4677777776544 9999999999998877 776532 1111110 01124468888877754 4555
Q ss_pred EEEEee------ecCCeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 95 EVYYFG------PCGKYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 95 ~l~~~G------~~~~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++++- ......|++|+++|.+|.++.+ .+.++...+..++.|+++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~l~~~~~~~i~~qi~~ 129 (343)
T cd07878 78 GLLDVFTPATSIENFNEVYLVTNLMGADLNNIVK--CQKLSDEHVQFLIYQLLR 129 (343)
T ss_pred hhhhhhcccccccccCcEEEEeecCCCCHHHHHh--cCCCCHHHHHHHHHHHHH
Confidence 544432 2224579999999999998765 367999999999999864
No 253
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.37 E-value=0.0032 Score=49.11 Aligned_cols=114 Identities=11% Similarity=0.067 Sum_probs=76.5
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCC----CCC--CceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHh
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDK----PSG--GGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQ 86 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~----~~~--~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~q 86 (143)
....+.+...++.++ ||.||.+.+. .+. ....++|.-. ...... ....+..|+.++..
T Consensus 13 ~~~~~~~~~~lg~G~---------~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~--~~~~~~-----~~~~~~~E~~~l~~ 76 (304)
T cd05101 13 SRDKLTLGKPLGEGC---------FGQVVMAEALGIDKDKPKEAVTVAVKMLK--DDATEK-----DLSDLVSEMEMMKM 76 (304)
T ss_pred cHHHeeecceeeccC---------CceEEEEEEeccCCCCCCcceeEEeeecc--cccchH-----HHHHHHHHHHHHHh
Confidence 344566777775544 8999988632 122 1233665532 211110 01236778888887
Q ss_pred hhcCCcccEEEEeeecCCeeEEeecccC-cCHHHHHHhc---------------CCCCCHHHHHHHHHHHhc
Q psy16459 87 LQSNKGIPEVYYFGPCGKYNALVMELLG-PSLEDLFDLC---------------NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 87 l~~~~~~P~l~~~G~~~~~~~iVM~LlG-~sL~~l~~~~---------------~~~fs~~T~~~ia~q~l~ 142 (143)
+...+++.+++++...+.+.|+||+.+. .+|.++.... ...++..+...++.|+++
T Consensus 77 l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~ 148 (304)
T cd05101 77 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVAR 148 (304)
T ss_pred hccCCCchheeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHH
Confidence 7677899999999988899999999885 5898876542 235788899999998864
No 254
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=97.37 E-value=0.0034 Score=48.47 Aligned_cols=64 Identities=17% Similarity=0.099 Sum_probs=49.3
Q ss_pred HHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccC-cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 78 KTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLG-PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 78 ~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG-~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
..|..++.++ .-++++++++++..+.+.|+|||++. .+|.++.+...+.++...++.++.|+++
T Consensus 64 ~~~~~~~~~l-~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~ 128 (274)
T cd05076 64 FETASLMSQV-SHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLAS 128 (274)
T ss_pred HHHHHHHhcC-CCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 3345555443 34799999999999999999999986 4677665544678999999999999864
No 255
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=97.36 E-value=0.0038 Score=48.18 Aligned_cols=110 Identities=14% Similarity=0.107 Sum_probs=74.0
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCC-----CCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhc
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKP-----SGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQS 89 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~-----~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~ 89 (143)
.+|++.+.++.. +||.||.|.+.. ++. ..++|.-....+.... .....|+.++.++.
T Consensus 5 ~~~~~~~~lg~g---------~~g~v~~~~~~~~~~~~~~~-~~aiK~~~~~~~~~~~-------~~~~~ei~~l~~l~- 66 (288)
T cd05050 5 NNIEYVRDIGQG---------AFGRVFQARAPGLLPYEPFT-MVAVKMLKEEASADMQ-------ADFQREAALMAEFD- 66 (288)
T ss_pred Hhceeccccccc---------ccccEEEEEEcccCCCCcce-eEEEEecCCCcCHHHH-------HHHHHHHHHHHhcC-
Confidence 357777777554 399999998753 334 4477764332221111 12455777777764
Q ss_pred CCcccEEEEeeecCCeeEEeecccC-cCHHHHHHhc---------------------CCCCCHHHHHHHHHHHhc
Q psy16459 90 NKGIPEVYYFGPCGKYNALVMELLG-PSLEDLFDLC---------------------NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 90 ~~~~P~l~~~G~~~~~~~iVM~LlG-~sL~~l~~~~---------------------~~~fs~~T~~~ia~q~l~ 142 (143)
.+++.+++++...+...++|||.+. .+|.++.... ...++...++.++.|++.
T Consensus 67 h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~ 141 (288)
T cd05050 67 HPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAA 141 (288)
T ss_pred CCchheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHH
Confidence 4789999999888889999999876 4898876532 124677778888888753
No 256
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=97.35 E-value=0.0015 Score=51.98 Aligned_cols=112 Identities=15% Similarity=0.075 Sum_probs=76.2
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCc
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKG 92 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~ 92 (143)
+...|++.+.++..+ ||.||++.|..+++.+ ++|.-.. ... ..........|+.++.++.+.++
T Consensus 5 ~~~~y~~~~~lg~g~---------~~~v~~~~~~~~~~~~-~vK~~~~--~~~----~~~~~~~~~~E~~~l~~l~~h~n 68 (337)
T cd07852 5 ILRKYEILQKLGKGA---------YGIVWKAIDRRTKEVV-ALKKIFD--AFR----NATDAQRTFREIMFLQELGDHPN 68 (337)
T ss_pred hhhHHHHhHhhcCCC---------CeeEEEEEEcCCCeEE-EEEeecc--ccC----cchhhhhhhHHHHHHHHhcCCCC
Confidence 344677777776544 8999999998888777 6664211 000 00111235568888888866778
Q ss_pred ccEEEEeeec--CCeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 93 IPEVYYFGPC--GKYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 93 ~P~l~~~G~~--~~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+.+++++... +...|+|||.++.+|.+..+. +.++...+..++.|++.
T Consensus 69 i~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~--~~~~~~~~~~i~~qi~~ 118 (337)
T cd07852 69 IVKLLNVIKAENDKDIYLVFEYMETDLHAVIRA--NILEDVHKRYIMYQLLK 118 (337)
T ss_pred ccceeeeeccCCCceEEEEecccccCHHHHHhc--CCCCHHHHHHHHHHHHH
Confidence 8888887654 347899999999888776543 37777788888887653
No 257
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=97.34 E-value=0.00085 Score=53.66 Aligned_cols=108 Identities=14% Similarity=0.058 Sum_probs=74.0
Q ss_pred eeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcc
Q psy16459 14 KCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGI 93 (143)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~ 93 (143)
...|.+.+.++.++ ||.||++.+..+++.+ ++|.-..... .....+..|+.++.++ ..+++
T Consensus 4 ~~~y~~~~~Lg~g~---------~g~vy~~~~~~~~~~v-~iK~i~~~~~--------~~~~~~~~Ei~~l~~l-~h~~i 64 (342)
T cd07854 4 GSRYMDLRPLGCGS---------NGLVFSAVDSDCDKRV-AVKKIVLTDP--------QSVKHALREIKIIRRL-DHDNI 64 (342)
T ss_pred CcceEEEEEecCCC---------CEEEEEEEECCCCcEE-EEEEEecCCC--------chHHHHHHHHHHHHhc-CCCcc
Confidence 35678888886544 8999999999998887 7765432211 1112355677777766 44566
Q ss_pred cEEEEeeec--------------CCeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 94 PEVYYFGPC--------------GKYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 94 P~l~~~G~~--------------~~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.++++.-.. ..+.|+|||.++.+|.+... .+.++...+..++.|+++
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~--~~~l~~~~~~~~~~qi~~ 125 (342)
T cd07854 65 VKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYMETDLANVLE--QGPLSEEHARLFMYQLLR 125 (342)
T ss_pred hhhHhhhcccccccccccccccccceEEEEeecccccHHHHHH--cCCCCHHHHHHHHHHHHH
Confidence 666544322 24679999999987766554 467999999999999864
No 258
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=97.34 E-value=0.0029 Score=48.03 Aligned_cols=105 Identities=19% Similarity=0.144 Sum_probs=71.4
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
++++++.++.++ ||.||++.+.++ ..+ ++|.-..... ..-....|+.++.++. .+++..
T Consensus 7 ~~~~~~~ig~g~---------~~~v~~~~~~~~-~~~-~~k~~~~~~~---------~~~~~~~E~~~l~~l~-~~~i~~ 65 (260)
T cd05070 7 SLQLIKKLGNGQ---------FGEVWMGTWNGN-TKV-AVKTLKPGTM---------SPESFLEEAQIMKKLR-HDKLVQ 65 (260)
T ss_pred Hhhhhheecccc---------CceEEEEEecCC-cee-EEEEecCCCC---------CHHHHHHHHHHHHhcC-CCceEE
Confidence 567777776644 999999976643 334 6654321110 0113566888888774 456767
Q ss_pred EEEeeecCCeeEEeeccc-CcCHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELL-GPSLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
++.+-. +...|+||+.+ |.+|.++.... .+.++..++..++.|++.
T Consensus 66 ~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~ 113 (260)
T cd05070 66 LYAVVS-EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAA 113 (260)
T ss_pred EEeEEC-CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence 776653 45678999988 56999987765 677999999999998764
No 259
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=97.33 E-value=0.002 Score=51.32 Aligned_cols=112 Identities=10% Similarity=0.070 Sum_probs=76.2
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCc
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKG 92 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~ 92 (143)
+..++.+++.++.++ ||.||.+.+..++..+ ++|.-. ..... .........|+.++..+. .++
T Consensus 3 ~~~~y~~~~~lg~G~---------~~~vy~~~~~~~~~~v-aiK~~~--~~~~~----~~~~~~~~~E~~~l~~l~-h~n 65 (337)
T cd07858 3 VDTKYVPIKPIGRGA---------YGIVCSAKNSETNEKV-AIKKIA--NAFDN----RIDAKRTLREIKLLRHLD-HEN 65 (337)
T ss_pred cccceeEEEEeccCC---------CeEEEEEEecCCCCeE-EEEEec--ccccc----cchhHHHHHHHHHHHhcC-CCC
Confidence 345788888886644 9999999999988887 776421 11000 001122445777777653 456
Q ss_pred ccEEEEeeecC-----CeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 93 IPEVYYFGPCG-----KYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 93 ~P~l~~~G~~~-----~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+.+++++.... .+.|+||+.++.+|.+..+. .+.++...+..++.|+++
T Consensus 66 i~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~-~~~l~~~~~~~i~~qi~~ 119 (337)
T cd07858 66 VIAIKDIMPPPHREAFNDVYIVYELMDTDLHQIIRS-SQTLSDDHCQYFLYQLLR 119 (337)
T ss_pred ccchHHheecccccccCcEEEEEeCCCCCHHHHHhc-CCCCCHHHHHHHHHHHHH
Confidence 66666544322 45799999999999887664 467999999999999864
No 260
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=97.31 E-value=0.0021 Score=49.13 Aligned_cols=98 Identities=18% Similarity=0.122 Sum_probs=71.3
Q ss_pred ccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccCcC
Q psy16459 37 FGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLGPS 116 (143)
Q Consensus 37 fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG~s 116 (143)
+|.||++.+..+++.+ +++.-.. ..... ........|+.++..+. .+++.+++..-..+...|+|||..+.+
T Consensus 12 ~~~v~~~~~~~~~~~~-~ik~~~~-~~~~~-----~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~e~~~~~ 83 (283)
T cd05118 12 YGVVYKARDKLTGEIV-AIKKIKL-RFESE-----GIPKTALREIKLLKELN-HPNIIKLLDVFRHKGDLYLVFEFMDTD 83 (283)
T ss_pred CceEEEEEcCCCCcEE-EEEEecc-ccccc-----hhHHHHHHHHHHHHHhc-CCCcchHHHhhccCCCEEEEEeccCCC
Confidence 8899999998887776 7764211 11010 01123556777777765 568888888888889999999999988
Q ss_pred HHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 117 LEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 117 L~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
|.+........++...+..++.|+++
T Consensus 84 l~~~l~~~~~~~~~~~~~~~~~~i~~ 109 (283)
T cd05118 84 LYKLIKDRQRGLPESLIKSYLYQLLQ 109 (283)
T ss_pred HHHHHHhhcccCCHHHHHHHHHHHHH
Confidence 88876655578999999999998764
No 261
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=97.30 E-value=0.00096 Score=49.07 Aligned_cols=96 Identities=23% Similarity=0.162 Sum_probs=71.6
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccCc
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLGP 115 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG~ 115 (143)
+||.||.+.+.++++.+ ++|.-..+..-.. ...+..|+....++ +.+++++++++...+...+++|+..+.
T Consensus 1 ~~g~v~~~~~~~~~~~~-~~k~~~~~~~~~~-------~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~l~~e~~~~ 71 (244)
T smart00220 1 SFGKVYLARDKKTGKLV-AIKVIKKEKIKKK-------RERILREISILKKL-KHPNIVRLYDVFEDEDKLYLVMEYCDG 71 (244)
T ss_pred CceEEEEEEECCCCcEE-EEEEecccccccH-------HHHHHHHHHHHHhC-CCCcHHHHHhheeeCCEEEEEEeCCCC
Confidence 48999999998888777 7776432211000 22456677777766 667899999999988999999999998
Q ss_pred -CHHHHHHhcCCCCCHHHHHHHHHHHh
Q psy16459 116 -SLEDLFDLCNRKFTLKTVLMIAIQLE 141 (143)
Q Consensus 116 -sL~~l~~~~~~~fs~~T~~~ia~q~l 141 (143)
+|.++.... +.++..++..++.|++
T Consensus 72 ~~L~~~~~~~-~~~~~~~~~~~~~~l~ 97 (244)
T smart00220 72 GDLFDLLKKR-GRLSEDEARFYARQIL 97 (244)
T ss_pred CCHHHHHHhc-cCCCHHHHHHHHHHHH
Confidence 998877654 3388899998888865
No 262
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=97.29 E-value=0.0037 Score=50.13 Aligned_cols=91 Identities=15% Similarity=0.106 Sum_probs=60.7
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCC-----CceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcC
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSG-----GGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSN 90 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~-----~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~ 90 (143)
+|++++.++.++ ||.||.+.+.+++ +.+ |+|+-......... ..+..|+.++.++...
T Consensus 8 ~~~i~~~lG~G~---------fg~Vy~a~~~~~~~~~~~~~v-a~K~~~~~~~~~~~-------~~~~~E~~~~~~l~~h 70 (337)
T cd05054 8 RLKLGKPLGRGA---------FGKVIQASAFGIEKSASCRTV-AVKMLKEGATASEY-------KALMTELKILIHIGHH 70 (337)
T ss_pred HhhhhcccccCc---------CceEEecccccccccccccee-eeeeccCCCCHHHH-------HHHHHHHHHHHhhccC
Confidence 677888886654 9999999765543 445 77764321111111 1245688888888667
Q ss_pred CcccEEEEeeec-CCeeEEeeccc-CcCHHHHHHh
Q psy16459 91 KGIPEVYYFGPC-GKYNALVMELL-GPSLEDLFDL 123 (143)
Q Consensus 91 ~~~P~l~~~G~~-~~~~~iVM~Ll-G~sL~~l~~~ 123 (143)
+++++++++... +.+.++||+.+ |.||.++...
T Consensus 71 ~niv~~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~ 105 (337)
T cd05054 71 LNVVNLLGACTKPGGPLMVIVEYCKFGNLSNYLRS 105 (337)
T ss_pred cchhheeeeEecCCCCEEEEEecCCCCCHHHHHHh
Confidence 789888887654 45678889888 4688877643
No 263
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=97.29 E-value=0.0059 Score=47.25 Aligned_cols=98 Identities=20% Similarity=0.210 Sum_probs=66.3
Q ss_pred ccceeeccCCCCCC----ceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecc
Q psy16459 37 FGKVMDKTDKPSGG----GYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMEL 112 (143)
Q Consensus 37 fG~vy~v~d~~~~~----~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~L 112 (143)
||.||++.+....+ ...+++.-....+..+. ..+..|+.++..+ ..+++.++++....+...|+||+.
T Consensus 13 ~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~-------~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~ 84 (290)
T cd05045 13 FGKVVKATAFRLKGRAGYTTVAVKMLKENASSSEL-------RDLLSEFNLLKQV-NHPHVIKLYGACSQDGPLLLIVEY 84 (290)
T ss_pred CcceEEEEEecCCCCCcceeEEEEecCCCCCHHHH-------HHHHHHHHHHhhC-CCCCEeeEEEEEecCCCcEEEEEe
Confidence 89999987654221 23355554322221111 1256688877766 457899999999999999999999
Q ss_pred cC-cCHHHHHHhc-----------------------CCCCCHHHHHHHHHHHhc
Q psy16459 113 LG-PSLEDLFDLC-----------------------NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 113 lG-~sL~~l~~~~-----------------------~~~fs~~T~~~ia~q~l~ 142 (143)
+. .+|.++.... .+.++..+++.++.|+++
T Consensus 85 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~ 138 (290)
T cd05045 85 AKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISR 138 (290)
T ss_pred cCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHH
Confidence 86 7898875432 235788899999988764
No 264
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=97.29 E-value=0.0056 Score=46.55 Aligned_cols=108 Identities=17% Similarity=0.114 Sum_probs=74.3
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCc
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKG 92 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~ 92 (143)
.+..+.+.+.++.++ ||.||.+.+... ..+ ++|.-..+ +.. ......|+.++..+. .++
T Consensus 4 ~~~~~~~~~~lg~g~---------~~~vy~~~~~~~-~~~-~iK~~~~~-~~~--------~~~~~~e~~~l~~l~-~~~ 62 (260)
T cd05073 4 PRESLKLEKKLGAGQ---------FGEVWMATYNKH-TKV-AVKTMKPG-SMS--------VEAFLAEANVMKTLQ-HDK 62 (260)
T ss_pred cccceeEEeEecCcc---------ceEEEEEEecCC-ccE-EEEecCCC-hhH--------HHHHHHHHHHHHhcC-CCC
Confidence 345677888886655 899999975433 334 77654221 110 113456888887764 457
Q ss_pred ccEEEEeeecCCeeEEeeccc-CcCHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 93 IPEVYYFGPCGKYNALVMELL-GPSLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 93 ~P~l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
+.+++..... ...|++|+.+ |.+|.++.... +..++..++..++.|++.
T Consensus 63 i~~~~~~~~~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~ 113 (260)
T cd05073 63 LVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAE 113 (260)
T ss_pred cceEEEEEcC-CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHH
Confidence 7777777666 6789999998 46999987765 677899999888888753
No 265
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=97.26 E-value=0.0023 Score=50.08 Aligned_cols=107 Identities=18% Similarity=0.150 Sum_probs=76.2
Q ss_pred eeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEE-EecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCc
Q psy16459 14 KCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALV-LSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKG 92 (143)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~-~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~ 92 (143)
...+++.+.++.++ ||.||++.|..+++.+ ++| ...- . ......+..|+.++.++ ..++
T Consensus 18 ~~~y~~~~~lg~g~---------~g~vy~~~~~~~~~~v-~iK~~~~~--~-------~~~~~~~~~e~~~l~~l-~h~~ 77 (296)
T cd06655 18 KKKYTRYEKIGQGA---------SGTVFTAIDVATGQEV-AIKQINLQ--K-------QPKKELIINEILVMKEL-KNPN 77 (296)
T ss_pred cceEEEEEEEecCC---------CeEEEEEEEcCCCcEE-EEEEEecc--c-------CchHHHHHHHHHHHHhc-CCCc
Confidence 34577887775544 8999999999999888 555 3221 0 11122345677777665 3467
Q ss_pred ccEEEEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 93 IPEVYYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 93 ~P~l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++.+++.-..+...|+|||.+ |.+|.++... +.++...+..++.|+++
T Consensus 78 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~l~~~~~~~i~~~l~~ 126 (296)
T cd06655 78 IVNFLDSFLVGDELFVVMEYLAGGSLTDVVTE--TCMDEAQIAAVCRECLQ 126 (296)
T ss_pred eeeeeeeEecCceEEEEEEecCCCcHHHHHHh--cCCCHHHHHHHHHHHHH
Confidence 888888888888999999977 6788876543 56899999998888753
No 266
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=97.26 E-value=0.003 Score=51.39 Aligned_cols=90 Identities=19% Similarity=0.164 Sum_probs=60.7
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccC-----CCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcC
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTD-----KPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSN 90 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d-----~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~ 90 (143)
++.+.+.++.++ ||.||++.+ .+++..+ |+|+-. ++... .....+..|+.++..+..-
T Consensus 36 ~~~~~~~LG~G~---------fG~V~~~~~~~~~~~~~~~~v-avK~l~--~~~~~-----~~~~~~~~Ei~il~~l~~H 98 (375)
T cd05104 36 RLSFGKTLGAGA---------FGKVVEATAYGLFKSDAAMTV-AVKMLK--PSAHL-----TEREALMSELKVLSYLGNH 98 (375)
T ss_pred HeehhheecCCc---------cceEEEEEEeccccCccceeE-EEEecc--CCcCc-----HHHHHHHHHHHHHHHhcCC
Confidence 577777776655 999998853 3333344 777532 11110 0112356799998888667
Q ss_pred CcccEEEEeeecCCeeEEeecccC-cCHHHHHH
Q psy16459 91 KGIPEVYYFGPCGKYNALVMELLG-PSLEDLFD 122 (143)
Q Consensus 91 ~~~P~l~~~G~~~~~~~iVM~LlG-~sL~~l~~ 122 (143)
+++.+++++...+...|+|||.+. -+|.+..+
T Consensus 99 pnIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~ 131 (375)
T cd05104 99 INIVNLLGACTVGGPTLVITEYCCYGDLLNFLR 131 (375)
T ss_pred cceeeeeeeeccCCcceeeehhccCCcHHHHHH
Confidence 899999999999999999999873 46766544
No 267
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=97.25 E-value=0.0032 Score=48.64 Aligned_cols=100 Identities=13% Similarity=0.035 Sum_probs=66.1
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhh--hcCCcccEEEEeeecCCeeEEeeccc
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQL--QSNKGIPEVYYFGPCGKYNALVMELL 113 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql--~~~~~~P~l~~~G~~~~~~~iVM~Ll 113 (143)
.||.||.+.+..+++.+ |+|.=... .... .........|..+...+ ...++++.+++....+...|+|||++
T Consensus 6 ~~g~Vy~~~~~~~~~~v-aiK~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 79 (278)
T cd05606 6 GFGEVYGCRKADTGKMY-AMKCLDKK-RIKM----KQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLM 79 (278)
T ss_pred CCeEEEEEEEecCCCEE-EEEEeecc-cccc----chhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecC
Confidence 48999999999888877 77753210 0000 00000112233333222 23567888888888888999999987
Q ss_pred -CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 114 -GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 114 -G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
|.+|.+.... .+.++...+..++.|+++
T Consensus 80 ~g~~L~~~l~~-~~~l~~~~~~~~~~ql~~ 108 (278)
T cd05606 80 NGGDLHYHLSQ-HGVFSEAEMRFYAAEIIL 108 (278)
T ss_pred CCCcHHHHHHh-cCCCCHHHHHHHHHHHHH
Confidence 6789887654 467999999999999864
No 268
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=97.23 E-value=0.0091 Score=45.78 Aligned_cols=111 Identities=13% Similarity=0.086 Sum_probs=75.3
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCC---CceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCC
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSG---GGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNK 91 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~---~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~ 91 (143)
.++.+...++.++ ||.||++.+..++ +...++|......+... ...+..|+.++..+ ..+
T Consensus 6 ~~~~~~~~i~~g~---------~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~-------~~~~~~e~~~l~~l-~h~ 68 (280)
T cd05043 6 DRVTLSDLLQEGT---------FGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQ-------VTLLLQESCLLYGL-SHQ 68 (280)
T ss_pred hheEEeeeecccC---------CceEEEEEEecCCCCceeEEEEEEccCCCCHHH-------HHHHHHHHHHHHhC-CCC
Confidence 4566777775544 9999999887743 33446665432211111 12355677777766 567
Q ss_pred cccEEEEeeec-CCeeEEeeccc-CcCHHHHHHhc--C-----CCCCHHHHHHHHHHHhc
Q psy16459 92 GIPEVYYFGPC-GKYNALVMELL-GPSLEDLFDLC--N-----RKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 92 ~~P~l~~~G~~-~~~~~iVM~Ll-G~sL~~l~~~~--~-----~~fs~~T~~~ia~q~l~ 142 (143)
++.++++++.. +.+.+++++.. +.+|.++.... . ..|+..++..++.|+++
T Consensus 69 ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~ 128 (280)
T cd05043 69 NILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIAC 128 (280)
T ss_pred CCCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHH
Confidence 88888888776 46788888876 47998876554 2 56999999999998864
No 269
>KOG0575|consensus
Probab=97.23 E-value=0.0029 Score=54.75 Aligned_cols=109 Identities=17% Similarity=0.141 Sum_probs=82.3
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEE
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEV 96 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l 96 (143)
++.-+.++-+| |..+|++.|..+++.| |+|+=.- ..+ .....+--+..|+.+-.+|.. +++-++
T Consensus 20 Y~~g~~LGkGg---------FA~cYe~~~~~tge~~-A~KvVpk----~~l-~k~~~reKv~~EIeIHr~L~H-pnIV~f 83 (592)
T KOG0575|consen 20 YKRGRFLGKGG---------FARCYEARDLDTGEVV-AVKVVPK----KLL-KKPKQREKVLNEIEIHRSLKH-PNIVQF 83 (592)
T ss_pred eeeeeeeccCc---------ceEEEEEEEcCCCcEE-EEEEeeh----HHh-cCcchHHHHHHHHHHHHhcCC-CcEEee
Confidence 55555665544 8889999999999999 6665321 111 112234457778877777654 489999
Q ss_pred EEeeecCCeeEEeecccCc-CHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 97 YYFGPCGKYNALVMELLGP-SLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 97 ~~~G~~~~~~~iVM~LlG~-sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+.+-.+..+-|||.||+-. +|..|.++ .+.|+-.-+.++..|+++
T Consensus 84 ~~~FEDs~nVYivLELC~~~sL~el~Kr-rk~ltEpEary~l~QIv~ 129 (592)
T KOG0575|consen 84 YHFFEDSNNVYIVLELCHRGSLMELLKR-RKPLTEPEARYFLRQIVE 129 (592)
T ss_pred eeEeecCCceEEEEEecCCccHHHHHHh-cCCCCcHHHHHHHHHHHH
Confidence 9999999999999999985 89999885 488999999999999864
No 270
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=97.23 E-value=0.005 Score=46.68 Aligned_cols=99 Identities=18% Similarity=0.060 Sum_probs=70.6
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-C
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL-G 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll-G 114 (143)
.||.||.+.+..++..+ ++|.-........ ...-.+..|+.++..+ ..++++++++....+.+.|+||+.. |
T Consensus 5 ~~~~v~~~~~~~~~~~~-~iK~~~~~~~~~~-----~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~ 77 (262)
T cd05572 5 GFGRVELVKVKSKNRTF-ALKCVKKRHIVET-----GQQEHIFSEKEILEEC-NHPFIVKLYRTFKDKKYIYMLMEYCLG 77 (262)
T ss_pred CceEEEEEEECCCCcEE-EEEEEehhcchhh-----hHHHHHHHHHHHHHhC-CCCCEeeeeeeEEcCCccEEEEecCCC
Confidence 48999999999888877 7665421110000 0012366777777666 5678999999888889999999985 6
Q ss_pred cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 115 PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 115 ~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.+|.+..... +.++...+..++.|+++
T Consensus 78 ~~L~~~l~~~-~~l~~~~~~~~~~~i~~ 104 (262)
T cd05572 78 GELWTILRDR-GLFDEYTARFYIACVVL 104 (262)
T ss_pred CcHHHHHhhc-CCCCHHHHHHHHHHHHH
Confidence 8998876543 56888898888888764
No 271
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=97.21 E-value=0.0057 Score=46.62 Aligned_cols=98 Identities=20% Similarity=0.116 Sum_probs=65.0
Q ss_pred EccceeeccCCCCCC-ceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-
Q psy16459 36 FFGKVMDKTDKPSGG-GYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL- 113 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~-~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll- 113 (143)
+||.||.+.+...++ ...++|.-....+ ... ...+..|+.++.++ ..+++.++++... ....++|||.+
T Consensus 7 ~~g~v~~~~~~~~~~~~~vavk~~~~~~~-~~~------~~~~~~E~~~l~~l-~h~~ii~~~~~~~-~~~~~lv~e~~~ 77 (257)
T cd05115 7 NFGCVKKGVYKMRKKQIDVAIKVLKNENE-KSV------RDEMMREAEIMHQL-DNPYIVRMIGVCE-AEALMLVMEMAS 77 (257)
T ss_pred CcccEEEEEEecCCCceeEEEEEcccccC-hHH------HHHHHHHHHHHHhc-CCCCeEEEEEEEc-CCCeEEEEEeCC
Confidence 489999886553333 2236665432211 110 11356688888876 4467888887654 45679999988
Q ss_pred CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 114 GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 114 G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
|.+|.+........++..++++++.|++.
T Consensus 78 ~~~L~~~l~~~~~~~~~~~~~~~~~~i~~ 106 (257)
T cd05115 78 GGPLNKFLSGKKDEITVSNVVELMHQVSM 106 (257)
T ss_pred CCCHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence 57898876654568999999999999864
No 272
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=97.18 E-value=0.0043 Score=49.20 Aligned_cols=100 Identities=17% Similarity=0.113 Sum_probs=66.4
Q ss_pred EccceeeccCCC---CCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecc
Q psy16459 36 FFGKVMDKTDKP---SGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMEL 112 (143)
Q Consensus 36 ~fG~vy~v~d~~---~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~L 112 (143)
.||.||.|.+.. ++..+ |+|+=.. ...............|..++.++. .+++.++++....+...|+|||.
T Consensus 8 ~~g~V~~~~~~~~~~~~~~~-avK~~~~----~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 8 GYGKVFQVRKVTGADTGKIF-AMKVLKK----ATIVRNQKDTAHTKAERNILEAVK-HPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred CCeEEEEEEEcccCCCCCEE-EEEEEEH----HHHHhhhhhHHHHHHHHHHHHhCC-CCchhceeeEEecCCeEEEEEeC
Confidence 499999998643 44444 7776321 011111111223567888777664 56889999888888999999997
Q ss_pred c-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 113 L-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 113 l-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+ |.+|.+..+. .+.++...+..++.|++.
T Consensus 82 ~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~ 111 (323)
T cd05584 82 LSGGELFMHLER-EGIFMEDTACFYLSEISL 111 (323)
T ss_pred CCCchHHHHHHH-cCCCCHHHHHHHHHHHHH
Confidence 7 4688776554 467888888888887753
No 273
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=97.17 E-value=0.0081 Score=46.55 Aligned_cols=109 Identities=19% Similarity=0.179 Sum_probs=72.3
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCC----CceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCC
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSG----GGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNK 91 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~----~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~ 91 (143)
++.+...++.++ ||.||.+.+.... ....+++.-. ..+.... ..+..|+.++..+. .+
T Consensus 6 ~~~~~~~lg~g~---------~g~vy~~~~~~~~~~~~~~~~~~k~~~-~~~~~~~-------~~~~~e~~~l~~l~-h~ 67 (291)
T cd05094 6 DIVLKRELGEGA---------FGKVFLAECYNLSPTKDKMLVAVKALK-DPTLAAR-------KDFQREAELLTNLQ-HE 67 (291)
T ss_pred HeEEeeeecccC---------CCeEEEeEeeccCCCCcceeeEEEecC-CccHHHH-------HHHHHHHHHHhcCC-CC
Confidence 566666665543 8999988653321 1122444421 1111111 13556777776653 57
Q ss_pred cccEEEEeeecCCeeEEeeccc-CcCHHHHHHhc---------------CCCCCHHHHHHHHHHHhc
Q psy16459 92 GIPEVYYFGPCGKYNALVMELL-GPSLEDLFDLC---------------NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 92 ~~P~l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~---------------~~~fs~~T~~~ia~q~l~ 142 (143)
++.+++++...+.+.++|||.+ |.+|.+..... .+.++..++..++.|+++
T Consensus 68 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~ 134 (291)
T cd05094 68 HIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIAS 134 (291)
T ss_pred CcceEEEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHH
Confidence 8999999999999999999998 68999876542 245899999999999864
No 274
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=97.17 E-value=0.0012 Score=49.45 Aligned_cols=99 Identities=19% Similarity=0.089 Sum_probs=70.4
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-C
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL-G 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll-G 114 (143)
.||.||.+.+..+++.+ +++.-.... ..+. ...-....|+.++.++. .++++.+++....+.+.|+||+.+ |
T Consensus 5 ~~~~v~~~~~~~~~~~~-~~k~~~~~~-~~~~----~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~e~~~~ 77 (250)
T cd05123 5 SFGKVLLVRKKDTGKLY-AMKVLKKKK-IIKR----KEVEHTLTERNILSRIN-HPFIVKLHYAFQTEEKLYLVLEYAPG 77 (250)
T ss_pred CceEEEEEEECCCCcEE-EEEEeehhh-hcch----HHHHHHHHHHHHHHHcC-CCcHHHHHHHeecCCeeEEEEecCCC
Confidence 48999999998877766 666532110 0000 01113566777766664 568888888888899999999999 8
Q ss_pred cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 115 PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 115 ~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.+|.+..... +.++...+..++.|+++
T Consensus 78 ~~L~~~l~~~-~~l~~~~~~~~~~qi~~ 104 (250)
T cd05123 78 GELFSHLSKE-GRFSEERARFYAAEIVL 104 (250)
T ss_pred CcHHHHHHhc-CCCCHHHHHHHHHHHHH
Confidence 9999887654 56889999998888764
No 275
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=97.16 E-value=0.0027 Score=50.79 Aligned_cols=111 Identities=14% Similarity=0.120 Sum_probs=73.9
Q ss_pred eeeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCC
Q psy16459 12 LLKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNK 91 (143)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~ 91 (143)
.+..++.+...++.++ ||.||++.+..+++.+ |+|.-..... .+ ........|+.++.++ .-+
T Consensus 12 ~~~~~y~~~~~ig~g~---------~g~v~~~~~~~~~~~v-aiK~~~~~~~-~~-----~~~~~~~~e~~~l~~l-~h~ 74 (342)
T cd07879 12 ELPERYTSLKQVGSGA---------YGSVCSAIDKRTGEKV-AIKKLSRPFQ-SE-----IFAKRAYRELTLLKHM-QHE 74 (342)
T ss_pred ccccceEEEEEeeecC---------CeEEEEEEeCCCCcEE-EEEEecCccc-cc-----cchhHHHHHHHHHHhc-CCC
Confidence 3456788888776544 8999999999888877 7775321100 00 0012345677777766 345
Q ss_pred cccEEEEeeecC------CeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 92 GIPEVYYFGPCG------KYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 92 ~~P~l~~~G~~~------~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++.+++++.... ...|+||+.++.+|.++. +..|+...+..++.|++.
T Consensus 75 niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~---~~~~~~~~~~~~~~qi~~ 128 (342)
T cd07879 75 NVIGLLDVFTSAVSGDEFQDFYLVMPYMQTDLQKIM---GHPLSEDKVQYLVYQMLC 128 (342)
T ss_pred CccchhheecccccCCCCceEEEEecccccCHHHHH---cCCCCHHHHHHHHHHHHH
Confidence 677676665432 345899999998776653 457899999999888764
No 276
>KOG0671|consensus
Probab=97.15 E-value=0.00074 Score=55.77 Aligned_cols=115 Identities=18% Similarity=0.210 Sum_probs=84.6
Q ss_pred ccceeeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhh
Q psy16459 9 SMSLLKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQ 88 (143)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~ 88 (143)
.++.+..+++|++.++.+- ||+|-+..|..+ +.+.|+|+= ++...+ +-.-..|+.++.++.
T Consensus 83 ~gD~l~~Ry~i~~~lGeGt---------FGkV~ec~D~~~-~~~vAlKIi---k~V~kY------reAa~iEi~vLqki~ 143 (415)
T KOG0671|consen 83 VGDILTNRYEIVDLLGEGT---------FGKVVECWDRET-KEHVALKII---KNVDKY------REAALIEIEVLQKIN 143 (415)
T ss_pred eccccccceehhhhhcCCc---------ccceEEEeecCC-CceehHHHH---HHHHHH------hhHHHHHHHHHHHHH
Confidence 3456677889998886533 999999999998 667688763 333333 234677999999985
Q ss_pred cC--CcccEEEEe---eecCCeeEEeecccCcCHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 89 SN--KGIPEVYYF---GPCGKYNALVMELLGPSLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 89 ~~--~~~P~l~~~---G~~~~~~~iVM~LlG~sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
.. .+.-++.-. =.-..+-+||-|++|.|+.|-.+.. ...|.+..+..+|.|+++
T Consensus 144 ~~DP~g~~rcv~m~~wFdyrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~ 203 (415)
T KOG0671|consen 144 ESDPNGKFRCVQMRDWFDYRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLE 203 (415)
T ss_pred hcCCCCceEEEeeehhhhccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHH
Confidence 53 233333333 2334677899999999999988876 788999999999999875
No 277
>KOG0615|consensus
Probab=97.14 E-value=0.002 Score=53.84 Aligned_cols=116 Identities=16% Similarity=0.099 Sum_probs=78.8
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCc
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKG 92 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~ 92 (143)
.+-.+.+-+.++.+ .||.|-++.+..|++.| |||+=.-..+...-. ...+.+...+|+.|++.+.. |+
T Consensus 170 ~~d~yii~~~LGsG---------afg~Vkla~e~~tgk~v-AiKIi~krk~~~~s~-~~~~~~~v~~EieILkkL~H-P~ 237 (475)
T KOG0615|consen 170 FNDYYIISKTLGSG---------AFGLVKLAYEKKTGKQV-AIKIINKRKSTGCSR-AIAKTRDVQNEIEILKKLSH-PN 237 (475)
T ss_pred hcceeEeeeeecCC---------ceeEEEEEEEcccCcEE-Eeeeeehhhcccccc-cccchhhhHHHHHHHHhcCC-CC
Confidence 44455555555443 39999999999999998 888743222211111 11234456899999998865 47
Q ss_pred ccEEEEeeecCCeeEEeecccCcCHHHHHHhc--CCCCCHHHHHHHHHHHhc
Q psy16459 93 IPEVYYFGPCGKYNALVMELLGPSLEDLFDLC--NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 93 ~P~l~~~G~~~~~~~iVM~LlG~sL~~l~~~~--~~~fs~~T~~~ia~q~l~ 142 (143)
+-+++++-..+.+.|||||.++- .+|+... .+.....+.-.+..|+|+
T Consensus 238 IV~~~d~f~~~ds~YmVlE~v~G--GeLfd~vv~nk~l~ed~~K~~f~Qll~ 287 (475)
T KOG0615|consen 238 IVRIKDFFEVPDSSYMVLEYVEG--GELFDKVVANKYLREDLGKLLFKQLLT 287 (475)
T ss_pred EEEEeeeeecCCceEEEEEEecC--ccHHHHHHhccccccchhHHHHHHHHH
Confidence 88999999999999999999974 2344332 566666666677777764
No 278
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=97.14 E-value=0.01 Score=45.71 Aligned_cols=108 Identities=19% Similarity=0.149 Sum_probs=71.5
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCC-----CCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcC
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKP-----SGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSN 90 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~-----~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~ 90 (143)
.+.+.++++.++ ||.||.|.+.. ++..+ +++.... ..... ...+..|+.++..+ ..
T Consensus 6 ~~~~~~~lg~g~---------~g~v~~~~~~~~~~~~~~~~~-~~k~~~~--~~~~~------~~~~~~e~~~l~~l-~h 66 (280)
T cd05092 6 DIVLKWELGEGA---------FGKVFLAECHNLLPEQDKMLV-AVKALKE--ASESA------RQDFQREAELLTVL-QH 66 (280)
T ss_pred hceeccccCCcc---------CCeEEEeEEecCCCCCCceEE-EEEecCc--CCHHH------HHHHHHHHHHHhcC-CC
Confidence 345556665543 99999986432 22233 5654321 11111 11356678877776 44
Q ss_pred CcccEEEEeeecCCeeEEeeccc-CcCHHHHHHhcC--------------CCCCHHHHHHHHHHHhc
Q psy16459 91 KGIPEVYYFGPCGKYNALVMELL-GPSLEDLFDLCN--------------RKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 91 ~~~P~l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~--------------~~fs~~T~~~ia~q~l~ 142 (143)
+++.++++++..+.+.++||+.+ |.+|.++..... ..++..++..++.|++.
T Consensus 67 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~ 133 (280)
T cd05092 67 QHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIAS 133 (280)
T ss_pred CCCceEEEEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHH
Confidence 68999999999999999999987 468888765431 45888999999988764
No 279
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=97.14 E-value=0.0064 Score=50.36 Aligned_cols=92 Identities=17% Similarity=0.121 Sum_probs=62.6
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCC-----CCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhc
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKP-----SGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQS 89 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~-----~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~ 89 (143)
.++.+.+.++.++ ||.||++.+.+ +...+ |+|.-.....-.. ...+..|+.++.++..
T Consensus 37 ~~~~~~~~lG~G~---------fG~Vy~~~~~~~~~~~~~~~v-avK~l~~~~~~~~-------~~~~~~E~~~l~~l~~ 99 (401)
T cd05107 37 DNLVLGRTLGSGA---------FGRVVEATAHGLSHSQSTMKV-AVKMLKSTARSSE-------KQALMSELKIMSHLGP 99 (401)
T ss_pred HHeehhhhccCCC---------ceeEEEEEEcCCCCCCCceEE-EEEecCCCCChhH-------HHHHHHHHHHHHhcCC
Confidence 3566777775544 99999998532 33344 7777532111110 1135678888888765
Q ss_pred CCcccEEEEeeecCCeeEEeecccC-cCHHHHHHh
Q psy16459 90 NKGIPEVYYFGPCGKYNALVMELLG-PSLEDLFDL 123 (143)
Q Consensus 90 ~~~~P~l~~~G~~~~~~~iVM~LlG-~sL~~l~~~ 123 (143)
.+++.++++....+...|+|||.+. .+|.+....
T Consensus 100 H~niv~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~ 134 (401)
T cd05107 100 HLNIVNLLGACTKGGPIYIITEYCRYGDLVDYLHR 134 (401)
T ss_pred CCCeEEEEEEEccCCCcEEEEeccCCCcHHHHHHh
Confidence 6789999999888889999999875 588876543
No 280
>KOG0198|consensus
Probab=97.14 E-value=0.0026 Score=51.49 Aligned_cols=98 Identities=24% Similarity=0.154 Sum_probs=74.3
Q ss_pred EEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCC--eeEEeecc
Q psy16459 35 YFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGK--YNALVMEL 112 (143)
Q Consensus 35 ~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~--~~~iVM~L 112 (143)
..||.||.+.+.++++.+ |+|..-+..+. ...+++.|..++.++. .+.+-++++...... ..++.||.
T Consensus 28 Gs~G~V~l~~~~~~g~~~-AvK~v~~~~~~--------~~~~l~~Ei~iL~~l~-~p~IV~~~G~~~~~~~~~~~i~mEy 97 (313)
T KOG0198|consen 28 GSFGSVYLATNKKTGELM-AVKSVELEDSP--------TSESLEREIRILSRLN-HPNIVQYYGSSSSRENDEYNIFMEY 97 (313)
T ss_pred ccceEEEEEEecCCCcce-eeeeeecccch--------hHHHHHHHHHHHHhCC-CCCEEeeCCccccccCeeeEeeeec
Confidence 359999999999996666 77665332111 1345889999999998 667777777644433 78899999
Q ss_pred cC-cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 113 LG-PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 113 lG-~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+- -||.++.+..+++++...+.+.+.|+|+
T Consensus 98 ~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~ 128 (313)
T KOG0198|consen 98 APGGSLSDLIKRYGGKLPEPLVRRYTRQILE 128 (313)
T ss_pred cCCCcHHHHHHHcCCCCCHHHHHHHHHHHHH
Confidence 86 5999998888449999999999999874
No 281
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=97.13 E-value=0.012 Score=45.50 Aligned_cols=109 Identities=19% Similarity=0.141 Sum_probs=72.2
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCC----CCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCC
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPS----GGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNK 91 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~----~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~ 91 (143)
.+.+.+.++.++ ||.||.|.+... .....+++.=. ..+-.. ...+..|+.++.++. .+
T Consensus 6 ~~~~~~~lg~G~---------~~~v~~~~~~~~~~~~~~~~~~ik~~~-~~~~~~-------~~~~~~e~~~l~~l~-h~ 67 (288)
T cd05093 6 NIVLKRELGEGA---------FGKVFLAECYNLCPEQDKILVAVKTLK-DASDNA-------RKDFHREAELLTNLQ-HE 67 (288)
T ss_pred HeeeccccCCcC---------CeeEEeeEeccCCCCCcceEEEEEecC-CcCHHH-------HHHHHHHHHHHHhCC-CC
Confidence 455666665544 899999875331 12222554321 111111 113566888888775 47
Q ss_pred cccEEEEeeecCCeeEEeeccc-CcCHHHHHHhc------------CCCCCHHHHHHHHHHHhc
Q psy16459 92 GIPEVYYFGPCGKYNALVMELL-GPSLEDLFDLC------------NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 92 ~~P~l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~------------~~~fs~~T~~~ia~q~l~ 142 (143)
+++++++++..+.+.|+|||.. |.+|.++.... ...++..++..++.|++.
T Consensus 68 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~ 131 (288)
T cd05093 68 HIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAA 131 (288)
T ss_pred CcceEEEEEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHH
Confidence 9999999999999999999987 47888876532 135899999999998764
No 282
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=97.13 E-value=0.011 Score=45.11 Aligned_cols=108 Identities=12% Similarity=0.117 Sum_probs=72.3
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCCCCCC----ceeEEEEecCCCCHHH-HHHHhCCCcchHHHHHHHHhhhcCC
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGG----GYQALVLSLLGPSLQD-LFELCGFRFSLKTVLMIAQQLQSNK 91 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~----~~~a~~~Ellg~sl~~-l~~~~~~~~sL~tE~~v~~ql~~~~ 91 (143)
+.+++.++.+ +||.||++.+..+.+ ...+++.-. ..... . ......|+.++.++ .-+
T Consensus 7 ~~~~~~lg~g---------~~g~v~~~~~~~~~~~~~~~~~~~k~~~--~~~~~~~------~~~~~~E~~~l~~l-~h~ 68 (275)
T cd05046 7 LQEITTLGRG---------EFGEVFLAKAKGIEEEGGETLVLVKALQ--KTKDENL------QSEFRRELDMFRKL-SHK 68 (275)
T ss_pred ceeeeeeccc---------ceeEEEEEEeccCCcCCCcceEEEEccC--CccchHH------HHHHHHHHHHHHhc-CCc
Confidence 4555566443 489999998655432 233554321 11111 1 11255688888777 446
Q ss_pred cccEEEEeeecCCeeEEeecccC-cCHHHHHHhc-CC-------CCCHHHHHHHHHHHhc
Q psy16459 92 GIPEVYYFGPCGKYNALVMELLG-PSLEDLFDLC-NR-------KFTLKTVLMIAIQLEG 142 (143)
Q Consensus 92 ~~P~l~~~G~~~~~~~iVM~LlG-~sL~~l~~~~-~~-------~fs~~T~~~ia~q~l~ 142 (143)
++++++++...+.+.|+|||.+. .+|.++.... .+ .++...+..++.|+++
T Consensus 69 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~ 128 (275)
T cd05046 69 NVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIAL 128 (275)
T ss_pred ceeeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHH
Confidence 88999999888899999999994 6898876654 22 5899999999988754
No 283
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=97.13 E-value=0.011 Score=45.60 Aligned_cols=110 Identities=15% Similarity=0.085 Sum_probs=68.5
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCce---eEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCC
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGY---QALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNK 91 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~---~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~ 91 (143)
.++.+++.++.++ ||.||++.+..++..+ .++|......+ ... ......|+..+.++ ..+
T Consensus 7 ~~~~~~~~lg~G~---------~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~-~~~------~~~~~~~~~~l~~l-~h~ 69 (279)
T cd05111 7 TELRKLKLLGSGV---------FGTVHKGIWIPEGDSIKIPVAIKTIQDRSG-RQT------FQEITDHMLAMGSL-DHA 69 (279)
T ss_pred hhceeccccCccC---------CcceEEEEEcCCCCceeeEEEEeecccccc-hHH------HHHHHHHHHHHhcC-CCC
Confidence 3677788786644 9999999887777643 24444311000 000 00123333343332 346
Q ss_pred cccEEEEeeecCCeeEEeec-ccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 92 GIPEVYYFGPCGKYNALVME-LLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 92 ~~P~l~~~G~~~~~~~iVM~-LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++.+++++...+.. +++|+ .-|.+|.++.....+.++..++..++.|+++
T Consensus 70 ~iv~~~~~~~~~~~-~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~ 120 (279)
T cd05111 70 YIVRLLGICPGASL-QLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAK 120 (279)
T ss_pred CcceEEEEECCCcc-EEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHH
Confidence 78888888765544 45555 4568999887766678999999999999864
No 284
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=97.12 E-value=0.0022 Score=50.11 Aligned_cols=94 Identities=21% Similarity=0.243 Sum_probs=67.8
Q ss_pred ccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-Cc
Q psy16459 37 FGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL-GP 115 (143)
Q Consensus 37 fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll-G~ 115 (143)
||.||.+.+..+++.+ ++|.--. +.... ...+..|+.++.++ ..+++.++++....+.+.|+|||.+ |.
T Consensus 35 ~g~v~~~~~~~~~~~v-aiK~~~~--~~~~~------~~~~~~e~~~l~~l-~h~~ii~~~~~~~~~~~~~lv~e~~~~~ 104 (292)
T cd06658 35 TGIVCIATEKHTGKQV-AVKKMDL--RKQQR------RELLFNEVVIMRDY-HHENVVDMYNSYLVGDELWVVMEFLEGG 104 (292)
T ss_pred CeEEEEEEECCCCCEE-EEEEEec--chHHH------HHHHHHHHHHHHhC-CCCcHHHHHHheecCCeEEEEEeCCCCC
Confidence 8999999998888877 7765311 11111 11255677776665 4567888888888889999999999 56
Q ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 116 SLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 116 sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+|.++.. .++++..++..++.|+++
T Consensus 105 ~L~~~~~--~~~l~~~~~~~~~~qi~~ 129 (292)
T cd06658 105 ALTDIVT--HTRMNEEQIATVCLSVLR 129 (292)
T ss_pred cHHHHHh--cCCCCHHHHHHHHHHHHH
Confidence 8888654 357899999999998764
No 285
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=97.11 E-value=0.009 Score=45.37 Aligned_cols=104 Identities=18% Similarity=0.167 Sum_probs=68.3
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEE
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEV 96 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l 96 (143)
+.+...++.++ ||.||++.+..+.. + ++|.-..+.. .......|+.++..+.. +++..+
T Consensus 8 ~~~~~~ig~g~---------~~~v~~~~~~~~~~-~-~lK~~~~~~~---------~~~~~~~E~~~l~~l~h-~~i~~~ 66 (260)
T cd05069 8 LRLDVKLGQGC---------FGEVWMGTWNGTTK-V-AIKTLKPGTM---------MPEAFLQEAQIMKKLRH-DKLVPL 66 (260)
T ss_pred eeeeeeecCcC---------CCeEEEEEEcCCce-E-EEEEcccCCc---------cHHHHHHHHHHHHhCCC-CCeeeE
Confidence 45555564433 89999998766543 4 6665321111 01134568888877654 345555
Q ss_pred EEeeecCCeeEEeecccC-cCHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 97 YYFGPCGKYNALVMELLG-PSLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 97 ~~~G~~~~~~~iVM~LlG-~sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
+++. .+.+.|+||+.+. .+|.+..+.. +..++..++..++.|+++
T Consensus 67 ~~~~-~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~ 113 (260)
T cd05069 67 YAVV-SEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIAD 113 (260)
T ss_pred EEEE-cCCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHH
Confidence 5554 3456899999986 5899888765 567999999999998764
No 286
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=97.11 E-value=0.0048 Score=48.21 Aligned_cols=95 Identities=24% Similarity=0.215 Sum_probs=67.7
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-C
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL-G 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll-G 114 (143)
.||.||++.+..+++.+ ++|.-..... . ....+..|+.++..+. .++++++++....+.+.|+|||.+ |
T Consensus 32 ~~g~v~~~~~~~~~~~v-~iK~~~~~~~-~-------~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~ 101 (292)
T cd06657 32 STGIVCIATVKSSGKLV-AVKKMDLRKQ-Q-------RRELLFNEVVIMRDYQ-HENVVEMYNSYLVGDELWVVMEFLEG 101 (292)
T ss_pred CCeEEEEEEEcCCCeEE-EEEEecccch-h-------HHHHHHHHHHHHHhcC-CcchhheeeEEEeCCEEEEEEecCCC
Confidence 48999999998888877 6654211111 0 1122556777666654 478999999999999999999988 4
Q ss_pred cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 115 PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 115 ~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.+|.++.. .+.++...+..++.|+++
T Consensus 102 ~~L~~~~~--~~~~~~~~~~~~~~ql~~ 127 (292)
T cd06657 102 GALTDIVT--HTRMNEEQIAAVCLAVLK 127 (292)
T ss_pred CcHHHHHh--cCCCCHHHHHHHHHHHHH
Confidence 57777543 357898999998888764
No 287
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=97.10 E-value=0.0046 Score=49.59 Aligned_cols=105 Identities=14% Similarity=0.113 Sum_probs=71.0
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCccc
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIP 94 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P 94 (143)
.++++++.++.++ ||.||++.+..+++.+ |+|.-..... ... ...+..|+.++..+. .+++.
T Consensus 74 ~~~~~~~~lg~G~---------~g~V~~~~~~~~~~~v-aiK~~~~~~~-~~~------~~~~~~E~~~l~~l~-h~~iv 135 (353)
T PLN00034 74 SELERVNRIGSGA---------GGTVYKVIHRPTGRLY-ALKVIYGNHE-DTV------RRQICREIEILRDVN-HPNVV 135 (353)
T ss_pred HHHhhhhhccCCC---------CeEEEEEEECCCCCEE-EEEEEecCCc-HHH------HHHHHHHHHHHHhCC-CCCcc
Confidence 4677777776544 9999999999988887 8876432111 111 113566888877664 46888
Q ss_pred EEEEeeecCCeeEEeecccC-cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 95 EVYYFGPCGKYNALVMELLG-PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 95 ~l~~~G~~~~~~~iVM~LlG-~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++++-..+...|+|||.+- -+|.+. ...+...+..++.|+++
T Consensus 136 ~~~~~~~~~~~~~lv~e~~~~~~L~~~-----~~~~~~~~~~i~~qi~~ 179 (353)
T PLN00034 136 KCHDMFDHNGEIQVLLEFMDGGSLEGT-----HIADEQFLADVARQILS 179 (353)
T ss_pred eeeeEeccCCeEEEEEecCCCCccccc-----ccCCHHHHHHHHHHHHH
Confidence 99988888889999999884 355431 23345566677777653
No 288
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=97.10 E-value=0.009 Score=47.87 Aligned_cols=110 Identities=15% Similarity=0.101 Sum_probs=73.6
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCc
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKG 92 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~ 92 (143)
+...|++++.++.++ ||.||.+.+..++..+ |+|.-. ....+. .....+..|+.++..+ ..++
T Consensus 14 ~~~~y~~~~~lg~g~---------~g~V~~~~~~~~~~~v-aiK~~~--~~~~~~----~~~~~~~~E~~~l~~l-~h~~ 76 (353)
T cd07850 14 VLKRYQNLKPIGSGA---------QGIVCAAYDTVTGQNV-AIKKLS--RPFQNV----THAKRAYRELVLMKLV-NHKN 76 (353)
T ss_pred hhcceEEEEEeccCC---------CEEEEEEEECCCCCEE-EEEecC--ccccCh----hHHHHHHHHHHHHHhc-CCCC
Confidence 345788888886654 9999999999998888 777521 100000 0011234577777665 4467
Q ss_pred ccEEEEeeecC------CeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 93 IPEVYYFGPCG------KYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 93 ~P~l~~~G~~~------~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+.+++++...+ .+.|+|||.++.+|.+.... .++...+..++.|+++
T Consensus 77 iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~l~~~~~~~~~~ql~~ 129 (353)
T cd07850 77 IIGLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQM---DLDHERMSYLLYQMLC 129 (353)
T ss_pred CcceeeeeccCCCccccCcEEEEEeccCCCHHHHHhh---cCCHHHHHHHHHHHHH
Confidence 77777664322 35799999999988876543 3888888888888764
No 289
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=97.10 E-value=0.0064 Score=46.46 Aligned_cols=110 Identities=20% Similarity=0.174 Sum_probs=74.2
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCC-----CCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhc
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPS-----GGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQS 89 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~-----~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~ 89 (143)
.++.+++.++.++ ||.||++.+... ...+ ++|.-..... .+. ......|+.++..+.
T Consensus 5 ~~~~~~~~lg~g~---------~~~v~~~~~~~~~~~~~~~~v-aiK~~~~~~~-~~~------~~~~~~e~~~l~~l~- 66 (280)
T cd05049 5 DTIVLKRELGEGA---------FGKVFLGECYHLEPENDKELV-AVKTLKETAS-NDA------RKDFEREAELLTNFQ- 66 (280)
T ss_pred HHhhHHhhccccC---------CceEeeeeeccccCcCCcceE-EEEeecccCC-HHH------HHHHHHHHHHHHhcC-
Confidence 3567777776644 899999876543 3334 6765322111 111 123566777777664
Q ss_pred CCcccEEEEeeecCCeeEEeeccc-CcCHHHHHHhc-------------CCCCCHHHHHHHHHHHhc
Q psy16459 90 NKGIPEVYYFGPCGKYNALVMELL-GPSLEDLFDLC-------------NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 90 ~~~~P~l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~-------------~~~fs~~T~~~ia~q~l~ 142 (143)
.+++++++++...+...|+||+.+ |.+|.+..+.. ...++..++..++.|++.
T Consensus 67 ~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~ 133 (280)
T cd05049 67 HENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIAS 133 (280)
T ss_pred CCCchheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHH
Confidence 468999999999999999999987 67888876543 245788888888888763
No 290
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=97.10 E-value=0.0088 Score=46.28 Aligned_cols=100 Identities=14% Similarity=0.047 Sum_probs=63.6
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhh--hcCCcccEEEEeeecCCeeEEeeccc
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQL--QSNKGIPEVYYFGPCGKYNALVMELL 113 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql--~~~~~~P~l~~~G~~~~~~~iVM~Ll 113 (143)
.||.||++.+..++..+ |+|.-.-...... .. ......|..+...+ ...++++.++.....++..|+|||.+
T Consensus 6 ~~g~Vy~~~~~~~~~~~-aiK~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 79 (279)
T cd05633 6 GFGEVYGCRKADTGKMY-AMKCLDKKRIKMK----QG-ETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLM 79 (279)
T ss_pred CCeEEEEEEECCCCcEE-EEEEEEccccccc----hH-HHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecC
Confidence 38999999999888877 7764311000000 00 00011222222222 23467888888888888999999987
Q ss_pred C-cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 114 G-PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 114 G-~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
. .+|.+.... .+.++...+..++.|++.
T Consensus 80 ~~~~L~~~i~~-~~~l~~~~~~~i~~qi~~ 108 (279)
T cd05633 80 NGGDLHYHLSQ-HGVFSEKEMRFYATEIIL 108 (279)
T ss_pred CCCCHHHHHHh-cCCCCHHHHHHHHHHHHH
Confidence 4 688776544 367999999999999864
No 291
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=97.09 E-value=0.012 Score=44.37 Aligned_cols=108 Identities=16% Similarity=0.161 Sum_probs=74.7
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEE
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEV 96 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l 96 (143)
|.+...++.+ .||.||.+.+..++..+ ++|.-.....-... ...+..|+.++..+. .+++.++
T Consensus 2 y~~~~~lg~G---------~~~~v~~~~~~~~~~~~-~ik~~~~~~~~~~~------~~~~~~e~~~~~~l~-~~~i~~~ 64 (264)
T cd06626 2 WQRGNKIGGG---------TFGKVYTAVNLDTGELM-AVKEIRIQDNDPKT------IKEIADEMKVLELLK-HPNLVKY 64 (264)
T ss_pred ceeeeEeecC---------CCcEEEEEEECCCCcEE-EEEEEECcccchHH------HHHHHHHHHHHHhCC-CCChhhe
Confidence 4555566443 38999999988888877 77764332111001 123566777777664 3688899
Q ss_pred EEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 97 YYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 97 ~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++........++|||.. |.+|.++... ++.++...+..++.|+++
T Consensus 65 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~i~~~i~~ 110 (264)
T cd06626 65 YGVEVHREKVYIFMEYCSGGTLEELLEH-GRILDEHVIRVYTLQLLE 110 (264)
T ss_pred eeeEecCCEEEEEEecCCCCcHHHHHhh-cCCCChHHHHHHHHHHHH
Confidence 99888888999999997 5789887654 355788888888877653
No 292
>KOG0032|consensus
Probab=97.09 E-value=0.0084 Score=49.75 Aligned_cols=111 Identities=23% Similarity=0.119 Sum_probs=81.7
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhC--CCcchHHHHHHHHhhhcC
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCG--FRFSLKTVLMIAQQLQSN 90 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~--~~~sL~tE~~v~~ql~~~ 90 (143)
++..+++-+.++.+. ||.||.+.++.|++.| |+|.=.- .+..+ ....+..|+.++.++.+-
T Consensus 33 ~~~~Y~l~~~lG~G~---------Fg~v~~~~~~~tg~~~-A~K~i~k-------~~~~~~~~~~~v~~Ev~il~~l~~h 95 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQ---------FGVVYLCREKSTGKEV-ACKVIPK-------RKLRGKEDREDVRREVAILQQLSGH 95 (382)
T ss_pred ccccEEehhhhCCCC---------ceEEEEEEecCCCcee-EEEEeeh-------hhccccccHHHHHHHHHHHHhccCC
Confidence 343455555665544 9999999999999999 6655321 11111 124789999999999988
Q ss_pred CcccEEEEeeecCCeeEEeecccC-cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 91 KGIPEVYYFGPCGKYNALVMELLG-PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 91 ~~~P~l~~~G~~~~~~~iVM~LlG-~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+.+-++++.=.....-++||||+. -.|-|-.... .||-..+..++.|.++
T Consensus 96 pniv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~ 146 (382)
T KOG0032|consen 96 PNIVQLKDAFEDPDSVYLVMELCEGGELFDRIVKK--HYSERDAAGIIRQILE 146 (382)
T ss_pred CCEEEEEEEEEcCCeEEEEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHH
Confidence 899999999999999999999997 4555432222 3999999999988764
No 293
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=97.08 E-value=0.0032 Score=47.90 Aligned_cols=99 Identities=18% Similarity=0.163 Sum_probs=65.1
Q ss_pred EccceeeccCCCCC-----CceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEee
Q psy16459 36 FFGKVMDKTDKPSG-----GGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVM 110 (143)
Q Consensus 36 ~fG~vy~v~d~~~~-----~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM 110 (143)
.||.||.+.+.... +...++|.-..+.+-.. ......|+.++..+ ..+++.+++++...+...|+||
T Consensus 7 ~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~-------~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~ 78 (269)
T cd05044 7 AFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQE-------KKEFLKEAHLMSNF-NHPNIVKLLGVCLLNEPQYIIM 78 (269)
T ss_pred cceeEEeeeecccccCcccceeehhhhhhcccchhh-------HHHHHHHHHHHHhc-CCCCeeeEeeeecCCCCeEEEE
Confidence 48899998876433 23336665422211011 12345577776665 3468888999888888999999
Q ss_pred ccc-CcCHHHHHHhc------CCCCCHHHHHHHHHHHhc
Q psy16459 111 ELL-GPSLEDLFDLC------NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 111 ~Ll-G~sL~~l~~~~------~~~fs~~T~~~ia~q~l~ 142 (143)
+.+ |.+|.+..... ...++..+++.++.|+++
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 117 (269)
T cd05044 79 ELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAK 117 (269)
T ss_pred eccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHH
Confidence 986 57888775432 234889999999998753
No 294
>KOG0694|consensus
Probab=97.08 E-value=0.0014 Score=57.51 Aligned_cols=108 Identities=19% Similarity=0.098 Sum_probs=80.7
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
.|..++.++.+ +||+|+.+..+++++.| |||+=--+.=++ ....-++.+|.+|......-|....
T Consensus 369 ~F~~l~vLGkG---------sFGkV~lae~k~~~e~y-AIK~LKK~~Il~-----~d~Ve~~~~EkrI~~la~~HPFL~~ 433 (694)
T KOG0694|consen 369 DFRLLAVLGRG---------SFGKVLLAELKGTNEYY-AIKVLKKGDILQ-----RDEVESLMCEKRIFELANRHPFLVN 433 (694)
T ss_pred ceEEEEEeccC---------cCceEEEEEEcCCCcEE-EEEEeeccceec-----cccHHHHHHHHHHHHHhccCCeEee
Confidence 57777777553 39999999999999955 888743222111 1235578899999988887788899
Q ss_pred EEEeeecCCeeEEeecccCcCHHHHHHhc-CCCCCHHHHHHHHHHH
Q psy16459 96 VYYFGPCGKYNALVMELLGPSLEDLFDLC-NRKFTLKTVLMIAIQL 140 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~LlG~sL~~l~~~~-~~~fs~~T~~~ia~q~ 140 (143)
++.+=++..+-|+|||.+.-.- +.... .++|+...+.-.|...
T Consensus 434 L~~~fQT~~~l~fvmey~~Ggd--m~~~~~~~~F~e~rarfyaAev 477 (694)
T KOG0694|consen 434 LFSCFQTKEHLFFVMEYVAGGD--LMHHIHTDVFSEPRARFYAAEV 477 (694)
T ss_pred cccccccCCeEEEEEEecCCCc--EEEEEecccccHHHHHHHHHHH
Confidence 9999999999999999987543 44444 5899998887666554
No 295
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=97.08 E-value=0.012 Score=44.80 Aligned_cols=109 Identities=16% Similarity=0.068 Sum_probs=71.7
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCC--CceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcc
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSG--GGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGI 93 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~--~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~ 93 (143)
.+.+.+.++.++ ||.||++.+.++. ....++|......+.... -....|+.++..+. .+++
T Consensus 7 ~~~~~~~lg~g~---------~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~-------~~~~~e~~~l~~~~-h~~i 69 (270)
T cd05056 7 DITLGRCIGEGQ---------FGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVR-------EKFLQEAYIMRQFD-HPHI 69 (270)
T ss_pred hceeeeeeCCcc---------ceeEEEEEEecCCCCCcceEEEecCCcCCHHHH-------HHHHHHHHHHHhCC-CCch
Confidence 355666665544 8999998876542 223366655332221111 12456888777774 4688
Q ss_pred cEEEEeeecCCeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 94 PEVYYFGPCGKYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 94 P~l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.++++.... ...|+||+.+ |.+|.++.......++..++..++.|++.
T Consensus 70 ~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~ 118 (270)
T cd05056 70 VKLIGVITE-NPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLST 118 (270)
T ss_pred hceeEEEcC-CCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence 888887654 4567999987 56898887665557999999999988764
No 296
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=97.08 E-value=0.0032 Score=46.95 Aligned_cols=100 Identities=18% Similarity=0.151 Sum_probs=58.1
Q ss_pred EccceeeccCCCCCCceeEEEEecCCC-CHHHHHHHhC--CCc---------------chHHHHHHHHhhhcC-CcccEE
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGP-SLQDLFELCG--FRF---------------SLKTVLMIAQQLQSN-KGIPEV 96 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~-sl~~l~~~~~--~~~---------------sL~tE~~v~~ql~~~-~~~P~l 96 (143)
+||.||.+.+. +++.+ |+|.-..+. +..+...... .+| ....|...+.++... ...|..
T Consensus 9 ~~~~Vy~a~~~-~g~~v-AvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~~p~~ 86 (190)
T cd05147 9 KEANVYHATTA-NGEER-AIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIPCPEP 86 (190)
T ss_pred cceEEEEEECC-CCCEE-EEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCcE
Confidence 49999999997 66666 887754331 1111000000 010 123488888877542 123544
Q ss_pred EEeeecCCeeEEeecccCcC-HHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 97 YYFGPCGKYNALVMELLGPS-LEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 97 ~~~G~~~~~~~iVM~LlG~s-L~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+.. ..+|||||.++.+ +..... ..+.++..+++.++.|++.
T Consensus 87 ~~~----~~~~iVmE~i~g~~l~~~~~-~~~~~~~~~~~~i~~qi~~ 128 (190)
T cd05147 87 ILL----KSHVLVMEFIGDDGWAAPRL-KDAPLSESKARELYLQVIQ 128 (190)
T ss_pred EEe----cCCEEEEEEeCCCCCcchhh-hcCCCCHHHHHHHHHHHHH
Confidence 432 2248999999854 333221 2578999999999988653
No 297
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=97.08 E-value=0.013 Score=45.00 Aligned_cols=111 Identities=13% Similarity=0.141 Sum_probs=72.6
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCC----CCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcC
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPS----GGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSN 90 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~----~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~ 90 (143)
..+++.+.++.++ ||.||.+.+.+. .+...++|.-....+.... .....|+.++.++ ..
T Consensus 6 ~~~~~~~~ig~G~---------~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~-------~~~~~e~~~l~~l-~~ 68 (277)
T cd05062 6 EKITMSRELGQGS---------FGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRER-------IEFLNEASVMKEF-NC 68 (277)
T ss_pred HHceeeeeecccc---------CCeEEEEEeccCCCCCceeEEEEEeccccCCHHHH-------HHHHHHHHHHHhC-CC
Confidence 3577777776544 899998765432 2223377653222221111 1245677777665 56
Q ss_pred CcccEEEEeeecCCeeEEeecccC-cCHHHHHHhcC---------CCCCHHHHHHHHHHHhc
Q psy16459 91 KGIPEVYYFGPCGKYNALVMELLG-PSLEDLFDLCN---------RKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 91 ~~~P~l~~~G~~~~~~~iVM~LlG-~sL~~l~~~~~---------~~fs~~T~~~ia~q~l~ 142 (143)
+++++++++...+.+.++|||++. .+|.++..... ..++..+++.++.|+++
T Consensus 69 ~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 130 (277)
T cd05062 69 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIAD 130 (277)
T ss_pred CCeeeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHH
Confidence 789999999888899999999865 68998765431 23677888888888764
No 298
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=97.08 E-value=0.003 Score=49.76 Aligned_cols=108 Identities=15% Similarity=0.106 Sum_probs=73.7
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEE
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEV 96 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l 96 (143)
|.+.+.++..+ ||.||++.+..+++.+ ++|.-. +...+ ......+..|+.++.++. .+++..+
T Consensus 2 y~i~~~ig~g~---------~~~v~~~~~~~~~~~~-~iK~~~--~~~~~----~~~~~~~~~e~~~l~~l~-~~~i~~~ 64 (330)
T cd07834 2 YELLKPIGSGA---------YGVVCSAVDKRTGRKV-AIKKIS--NVFDD----LIDAKRILREIKLLRHLR-HENIIGL 64 (330)
T ss_pred ceeeeeecCCC---------CeEEEEEEeCCCCcEE-EEEeec--ccccc----chhhhhHHHHHHHHHhcC-Ccchhhh
Confidence 45556665544 8999999998888877 665432 11100 011223566888887774 5677777
Q ss_pred EEeeecCC-----eeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 97 YYFGPCGK-----YNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 97 ~~~G~~~~-----~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++..... ..|+||+.++.+|.++... .+.++...+..++.|+++
T Consensus 65 ~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~-~~~l~~~~~~~i~~~l~~ 114 (330)
T cd07834 65 LDILRPPSPEDFNDVYIVTELMETDLHKVIKS-PQPLTDDHIQYFLYQILR 114 (330)
T ss_pred hhhhcccCcccccceEEEecchhhhHHHHHhC-CCCCCHHHHHHHHHHHHH
Confidence 77665543 6799999999888776543 358999999999999864
No 299
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=97.07 E-value=0.0081 Score=48.10 Aligned_cols=110 Identities=14% Similarity=0.007 Sum_probs=72.5
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCc
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKG 92 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~ 92 (143)
+..+|.+++.++.++ ||.||.+.|..++..+ |+|.-.....-... ......|+.++..+. -++
T Consensus 15 ~~~~y~~~~~lg~G~---------~g~V~~~~~~~~~~~v-aiK~~~~~~~~~~~------~~~~~~E~~~l~~l~-h~n 77 (355)
T cd07874 15 VLKRYQNLKPIGSGA---------QGIVCAAYDAVLDRNV-AIKKLSRPFQNQTH------AKRAYRELVLMKCVN-HKN 77 (355)
T ss_pred hhhceeEEEEeeecC---------CEEEEEEEecCCCceE-EEEEeCCcccChHH------HHHHHHHHHHHHHhC-CCc
Confidence 334888998886655 9999999999888877 77653211100010 112345666666553 456
Q ss_pred ccEEEEeeecC------CeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 93 IPEVYYFGPCG------KYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 93 ~P~l~~~G~~~------~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+.++++....+ ...|+|||+++.+|.+... ..++...+..++.|+++
T Consensus 78 iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~---~~l~~~~~~~~~~qi~~ 130 (355)
T cd07874 78 IISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLC 130 (355)
T ss_pred hhceeeeeeccccccccceeEEEhhhhcccHHHHHh---hcCCHHHHHHHHHHHHH
Confidence 76776654322 3569999999988776543 45788888888888764
No 300
>KOG1290|consensus
Probab=97.07 E-value=0.0053 Score=52.43 Aligned_cols=109 Identities=22% Similarity=0.207 Sum_probs=82.1
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcC----
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSN---- 90 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~---- 90 (143)
+++-|.++++=+. |..||++-|+.+.... |||+- +|-+... .+--.|++++.++...
T Consensus 78 gRY~v~rKLGWGH---------FSTVWLawDtq~~r~V-AlKVv---KSAqhYt------EaAlDEIklL~~v~~~Dp~~ 138 (590)
T KOG1290|consen 78 GRYHVQRKLGWGH---------FSTVWLAWDTQNKRYV-ALKVV---KSAQHYT------EAALDEIKLLQQVREGDPND 138 (590)
T ss_pred ceEEEEEeccccc---------cceeEEEeeccCCeEE-EEEEE---ehhhHHH------HHHHHHHHHHHHHHhcCCCC
Confidence 4555666663322 7779999999888766 99886 3333331 2345688999888653
Q ss_pred ---CcccEEEEe----eecCCeeEEeecccCcCHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 91 ---KGIPEVYYF----GPCGKYNALVMELLGPSLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 91 ---~~~P~l~~~----G~~~~~~~iVM~LlG~sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
.++-++++. |..+.+-+||.|.||.||-.+.+.+ .+-..+..|-.|+.|+|.
T Consensus 139 ~~~~~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~ 198 (590)
T KOG1290|consen 139 PGKKCVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLT 198 (590)
T ss_pred CCCceeeeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHH
Confidence 466666665 6677899999999999999998888 889999999999999874
No 301
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=97.06 E-value=0.0024 Score=50.00 Aligned_cols=95 Identities=19% Similarity=0.180 Sum_probs=68.3
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccC-
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLG- 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG- 114 (143)
.||.||.+.+..++..+ ++|.--.... .....+..|+.++..+ .-++++++++....+...|+||+.+.
T Consensus 33 ~~g~v~~~~~~~~~~~v-~iK~~~~~~~--------~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~~~~~~iv~e~~~~ 102 (297)
T cd06659 33 STGIVCIAREKHSGRQV-AVKMMDLRKQ--------QRRELLFNEVVIMRDY-QHQNVVEMYKSYLVGEELWVLMEFLQG 102 (297)
T ss_pred CceeEEEEEEcCCCCEE-EEEEEEeccc--------chHHHHHHHHHHHHhC-CCCchhhhhhheeeCCeEEEEEecCCC
Confidence 38999999998888877 7765321110 1112355677666655 35688899998888899999999884
Q ss_pred cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 115 PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 115 ~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.+|.++.. .+.++...+..++.|+++
T Consensus 103 ~~L~~~~~--~~~~~~~~~~~~~~qi~~ 128 (297)
T cd06659 103 GALTDIVS--QTRLNEEQIATVCESVLQ 128 (297)
T ss_pred CCHHHHHh--hcCCCHHHHHHHHHHHHH
Confidence 57777544 367899999999998864
No 302
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=97.04 E-value=0.0061 Score=47.74 Aligned_cols=95 Identities=14% Similarity=0.129 Sum_probs=64.5
Q ss_pred EccceeeccCCC--CCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEee--ecCCeeEEeec
Q psy16459 36 FFGKVMDKTDKP--SGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFG--PCGKYNALVME 111 (143)
Q Consensus 36 ~fG~vy~v~d~~--~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G--~~~~~~~iVM~ 111 (143)
.||.||++.+.. ++..+ |+|.-.. .........|+.++.++. -+++.++++.- ..+...|+||+
T Consensus 13 ~~g~Vy~~~~~~~~~~~~~-aiK~~~~----------~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07868 13 TYGHVYKAKRKDGKDDRDY-ALKQIEG----------TGISMSACREIALLRELK-HPNVISLQKVFLSHADRKVWLLFD 80 (317)
T ss_pred CCeEEEEEEEccCCCCceE-EEEEECC----------CCCcHHHHHHHHHHHhcC-CCCCcceeeeEecCCCcEEEEEEe
Confidence 499999998654 44555 6664311 011223556888888774 35676776654 34567899999
Q ss_pred ccCcCHHHHHHhc--------CCCCCHHHHHHHHHHHhc
Q psy16459 112 LLGPSLEDLFDLC--------NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 112 LlG~sL~~l~~~~--------~~~fs~~T~~~ia~q~l~ 142 (143)
..+.+|.++.... ...++...+..++.|+++
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~ 119 (317)
T cd07868 81 YAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILD 119 (317)
T ss_pred ccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHH
Confidence 9999999886532 125888899999999864
No 303
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=97.02 E-value=0.0095 Score=45.38 Aligned_cols=97 Identities=15% Similarity=0.127 Sum_probs=67.2
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-C
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL-G 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll-G 114 (143)
+||.||++.+..++..+ +++.=. ..+..+. ..+..|+.++..+ ..+++.+++++...+.+.++|||.+ |
T Consensus 20 ~~g~v~~~~~~~~~~~v-~~k~~~-~~~~~~~-------~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 89 (268)
T cd06624 20 TYGIVYAARDLSTQVRI-AIKEIP-ERDSRYV-------QPLHEEIALHSYL-KHRNIVQYLGSDSENGFFKIFMEQVPG 89 (268)
T ss_pred CceEEEEeEecCCCcEE-EEEEec-CCCHHHH-------HHHHHHHHHHHhc-CCCCeeeeeeeeccCCEEEEEEecCCC
Confidence 48899999998887766 665321 1111111 1356788877766 4568889999989999999999987 6
Q ss_pred cCHHHHHHhcCCCC--CHHHHHHHHHHHhc
Q psy16459 115 PSLEDLFDLCNRKF--TLKTVLMIAIQLEG 142 (143)
Q Consensus 115 ~sL~~l~~~~~~~f--s~~T~~~ia~q~l~ 142 (143)
.+|.+........+ +..++..++.|+++
T Consensus 90 ~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~ 119 (268)
T cd06624 90 GSLSALLRSKWGPLKDNEQTIIFYTKQILE 119 (268)
T ss_pred CCHHHHHHHhcccCCCcHHHHHHHHHHHHH
Confidence 79998765432334 77777777777653
No 304
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=97.01 E-value=0.0074 Score=45.67 Aligned_cols=104 Identities=14% Similarity=0.064 Sum_probs=70.0
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
++.+.+.++.++ ||.||++... +..+ ++|...... ....+..|+.++.++. .+++.+
T Consensus 7 ~~~~~~~lg~g~---------~~~v~~~~~~--~~~~-~~k~~~~~~----------~~~~~~~e~~~l~~l~-~~~i~~ 63 (256)
T cd05082 7 ELKLLQTIGKGE---------FGDVMLGDYR--GNKV-AVKCIKNDA----------TAQAFLAEASVMTQLR-HSNLVQ 63 (256)
T ss_pred hCeeeeeecccC---------CCeEEEEEEc--CCcE-EEEEeCCCc----------hHHHHHHHHHHHHhCC-CCCeee
Confidence 456666665544 7889988654 3445 777653211 1123566888877764 457777
Q ss_pred EEEeee-cCCeeEEeecccC-cCHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGP-CGKYNALVMELLG-PSLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~-~~~~~~iVM~LlG-~sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
++++.. .+...|+|||.+. .+|.+..+.. ...++..++..++.|+++
T Consensus 64 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~ 113 (256)
T cd05082 64 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCE 113 (256)
T ss_pred EEEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence 777654 4467899999984 6999887665 456888999999988753
No 305
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=97.01 E-value=0.0055 Score=46.15 Aligned_cols=96 Identities=18% Similarity=0.148 Sum_probs=65.0
Q ss_pred EccceeeccCCCCCCc------e---eEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCee
Q psy16459 36 FFGKVMDKTDKPSGGG------Y---QALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYN 106 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~------~---~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~ 106 (143)
.||.||++.+..++.. + .+++.- ..+-. .......|+.++.++ ..+++..++++... ...
T Consensus 7 ~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~--~~~~~-------~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~-~~~ 75 (259)
T cd05037 7 TFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVL--GSDHR-------DSLAFFETASLMSQL-SHKHLVKLYGVCVR-DEN 75 (259)
T ss_pred ccceEEEEEEeccCCccccCCccceeeeeecc--ccchh-------hHHHHHHHHHHHHcC-CCcchhheeeEEec-CCc
Confidence 4899999998877621 1 133321 11100 012344566666655 45789999988877 778
Q ss_pred EEeecccC-cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 107 ALVMELLG-PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 107 ~iVM~LlG-~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
|+|||.+. .+|.++.......++..++..++.|++.
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~ 112 (259)
T cd05037 76 IMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLAS 112 (259)
T ss_pred EEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHH
Confidence 99999985 6888877665448999999999998763
No 306
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=97.01 E-value=0.01 Score=47.72 Aligned_cols=109 Identities=13% Similarity=0.007 Sum_probs=71.7
Q ss_pred eeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcc
Q psy16459 14 KCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGI 93 (143)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~ 93 (143)
..+|.+++.++.++ ||.||.+.|..++..+ |+|.-... ..+. ........|+.++..+. .+++
T Consensus 23 ~~~y~~~~~lg~G~---------~g~V~~~~~~~~~~~v-aiK~~~~~--~~~~----~~~~~~~~E~~~l~~l~-h~~i 85 (364)
T cd07875 23 LKRYQNLKPIGSGA---------QGIVCAAYDAILERNV-AIKKLSRP--FQNQ----THAKRAYRELVLMKCVN-HKNI 85 (364)
T ss_pred hcceeEEEEeecCC---------CeEEEEEEECCCCcEE-EEEEeCcc--ccCc----hhHHHHHHHHHHHHhcC-CCCc
Confidence 34788888886655 9999999999998887 77653211 0000 00112345666666553 3566
Q ss_pred cEEEEeeec------CCeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 94 PEVYYFGPC------GKYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 94 P~l~~~G~~------~~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
..+++.-.. ....|+|||+++.+|.+... ..++...+..++.|+++
T Consensus 86 i~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~---~~~~~~~~~~~~~qi~~ 137 (364)
T cd07875 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELDHERMSYLLYQMLC 137 (364)
T ss_pred cccceeecccccccccCeEEEEEeCCCCCHHHHHH---hcCCHHHHHHHHHHHHH
Confidence 666554322 24579999999998887653 45788888888888764
No 307
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=96.99 E-value=0.013 Score=45.37 Aligned_cols=95 Identities=24% Similarity=0.221 Sum_probs=68.0
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-C
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL-G 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll-G 114 (143)
.+|.||++.+..++..+ ++|.-.... .. ....+..|+.++..+ +.+++.++++....+.+.|+||+.+ |
T Consensus 31 ~~g~v~~~~~~~~~~~~-~iK~~~~~~-~~-------~~~~~~~e~~~l~~~-~h~~vv~~~~~~~~~~~~~~v~e~~~~ 100 (285)
T cd06648 31 STGIVCIATDKSTGRQV-AVKKMDLRK-QQ-------RRELLFNEVVIMRDY-QHPNIVEMYSSYLVGDELWVVMEFLEG 100 (285)
T ss_pred CCeEEEEEEECCCCCEE-EEEEEeccc-hh-------HHHHHHHHHHHHHHc-CCCChheEEEEEEcCCeEEEEEeccCC
Confidence 38999999998888877 665421111 00 011245566666554 4568999999988889999999988 7
Q ss_pred cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 115 PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 115 ~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.+|.+.... ++++...+..++.|++.
T Consensus 101 ~~L~~~~~~--~~~~~~~~~~~~~ql~~ 126 (285)
T cd06648 101 GALTDIVTH--TRMNEEQIATVCLAVLK 126 (285)
T ss_pred CCHHHHHHh--CCCCHHHHHHHHHHHHH
Confidence 899987664 67888888888888764
No 308
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=96.99 E-value=0.0067 Score=44.89 Aligned_cols=100 Identities=15% Similarity=0.049 Sum_probs=58.9
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCC-HHHHHHHh--CC---------------CcchHHHHHHHHhhhcC-CcccEE
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPS-LQDLFELC--GF---------------RFSLKTVLMIAQQLQSN-KGIPEV 96 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~s-l~~l~~~~--~~---------------~~sL~tE~~v~~ql~~~-~~~P~l 96 (143)
+||+||++.+. ++..+ |+|.-..+.. ..+..+.. .+ ....+.|...+.++... ..+|..
T Consensus 9 ~~~~Vy~a~~~-~g~~v-avKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~ 86 (190)
T cd05145 9 KEANVYHARTG-DGEEL-AVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGVPVPEP 86 (190)
T ss_pred CCcEEEEEEcC-CCCEE-EEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCCCCceE
Confidence 38999999987 66666 8887654321 00000000 00 01234566777666543 355777
Q ss_pred EEeeecCCeeEEeecccCcC-HHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 97 YYFGPCGKYNALVMELLGPS-LEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 97 ~~~G~~~~~~~iVM~LlG~s-L~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++.. .+|+|||+++.. +.... ......+...+..++.|+++
T Consensus 87 ~~~~----~~~lVmE~~~g~~~~~~~-l~~~~~~~~~~~~i~~~l~~ 128 (190)
T cd05145 87 ILLK----KNVLVMEFIGDDGSPAPR-LKDVPLEEEEAEELYEQVVE 128 (190)
T ss_pred EEec----CCEEEEEEecCCCchhhh-hhhccCCHHHHHHHHHHHHH
Confidence 6653 258999999754 32211 12356788899999988764
No 309
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=96.96 E-value=0.014 Score=44.08 Aligned_cols=98 Identities=21% Similarity=0.112 Sum_probs=68.2
Q ss_pred EccceeeccCCCCCCc--eeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc
Q psy16459 36 FFGKVMDKTDKPSGGG--YQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL 113 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~--~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll 113 (143)
+||.||++.+..+++. ..|+|.-.....- +. ......|+.++.++. .+++.++++.... ...++|||.+
T Consensus 7 ~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~------~~~~~~e~~~l~~l~-h~~iv~~~~~~~~-~~~~~v~e~~ 77 (257)
T cd05040 7 SFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-DI------MDDFLKEAAIMHSLD-HENLIRLYGVVLT-HPLMMVTELA 77 (257)
T ss_pred CcccEEeeeEecCCCCceEEEEeecCCcccH-HH------HHHHHHHHHHHhhcC-CCCccceeEEEcC-CeEEEEEEec
Confidence 4899999988664443 2366654221110 11 123566888877774 4578888888877 8899999998
Q ss_pred -CcCHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 114 -GPSLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 114 -G~sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
|.+|.+..... .+.++..++..++.|+++
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~ 108 (257)
T cd05040 78 PLGSLLDRLRKDALGHFLISTLCDYAVQIAN 108 (257)
T ss_pred CCCcHHHHHHhcccccCcHHHHHHHHHHHHH
Confidence 67898876665 367899999999988764
No 310
>KOG0591|consensus
Probab=96.92 E-value=0.00024 Score=56.99 Aligned_cols=110 Identities=18% Similarity=0.106 Sum_probs=78.7
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
++.|++.++.+ +||.||+|.+..|+.-...-++...--+ . ..+..+-.|+.++.|+... .+-+
T Consensus 20 ~y~Il~~IG~G---------sFg~vykv~~~~~g~l~a~K~i~f~~md-~------k~rq~~v~Ei~lLkQL~Hp-NIVq 82 (375)
T KOG0591|consen 20 DYQILKKIGRG---------SFGEVYKVQCLLDGKLVALKKIQFGMMD-A------KARQDCVKEISLLKQLNHP-NIVQ 82 (375)
T ss_pred HHHHHHHHcCC---------cchheEEeeeccCcchhhhhhcchhhcc-H------HHHHHHHHHHHHHHhcCCc-hHHH
Confidence 78999999653 4999999999999998733344311000 0 1234567799999998664 4555
Q ss_pred EEEe--eecCCeeEEeecccCc-CHHHHHHhc---CCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYF--GPCGKYNALVMELLGP-SLEDLFDLC---NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~--G~~~~~~~iVM~LlG~-sL~~l~~~~---~~~fs~~T~~~ia~q~l~ 142 (143)
+++. -.+..--+||||+++. +|+.+.+.. .+.|+-+|+.++-.|.++
T Consensus 83 Yy~~~f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~ 135 (375)
T KOG0591|consen 83 YYAHSFIEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCR 135 (375)
T ss_pred HHHHhhhccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHH
Confidence 5553 2344557899999985 999886654 678999999999988764
No 311
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=96.92 E-value=0.017 Score=43.53 Aligned_cols=105 Identities=17% Similarity=0.123 Sum_probs=74.3
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
++++.+.++.++ ||.||++.+. +..+ ++|.-..... . ......|+.++..+. .+++.+
T Consensus 7 ~~~~~~~ig~g~---------~g~v~~~~~~--~~~v-~iK~~~~~~~--~-------~~~~~~e~~~l~~l~-~~~i~~ 64 (256)
T cd05039 7 ELKLGATIGKGE---------FGDVMLGDYR--GQKV-AVKCLKDDST--A-------AQAFLAEASVMTTLR-HPNLVQ 64 (256)
T ss_pred hccceeeeecCC---------CceEEEEEec--CcEE-EEEEeccchh--H-------HHHHHHHHHHHHhcC-Ccceee
Confidence 456666665533 8999998764 3444 7776532211 0 113556777777764 457888
Q ss_pred EEEeeecCCeeEEeecccC-cCHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELLG-PSLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~LlG-~sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
+++....+...++|||.+. .+|.+..+.. .+.++...+..++.|++.
T Consensus 65 ~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~ 113 (256)
T cd05039 65 LLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCE 113 (256)
T ss_pred eEEEEcCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence 9988888889999999886 5999887665 457999999999999764
No 312
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=96.90 E-value=0.019 Score=43.73 Aligned_cols=65 Identities=9% Similarity=0.017 Sum_probs=48.9
Q ss_pred hHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccC-cCHHHHHHhc----CCCCCHHHHHHHHHHHhc
Q psy16459 77 LKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLG-PSLEDLFDLC----NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 77 L~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG-~sL~~l~~~~----~~~fs~~T~~~ia~q~l~ 142 (143)
...|+.++..+ ..+++.++++....+...|+|||++. .+|.++.... .+.++..++..++.|++.
T Consensus 42 ~~~e~~~~~~l-~h~nii~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~ 111 (269)
T cd05042 42 FLQEVQPYREL-NHPNVLQCLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVAS 111 (269)
T ss_pred HHHHHHHHHhC-CCCCcceEEEEECCCCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHH
Confidence 34566666554 56789999999888899999999994 5999876553 234667788888888753
No 313
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=96.88 E-value=0.023 Score=43.04 Aligned_cols=96 Identities=23% Similarity=0.161 Sum_probs=62.3
Q ss_pred ccceeeccC--CCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccC
Q psy16459 37 FGKVMDKTD--KPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLG 114 (143)
Q Consensus 37 fG~vy~v~d--~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG 114 (143)
||.||++.+ .+++..+ ++|.-... +..... .-.+..|+.++..+ ..+++.++++... +...++||+.++
T Consensus 8 ~g~v~~~~~~~~~~~~~~-aiK~~~~~-~~~~~~-----~~~~~~e~~~l~~l-~h~~i~~~~~~~~-~~~~~lv~e~~~ 78 (257)
T cd05116 8 FGTVKKGMYKMKKSEKTV-AVKILKND-NNDPAL-----KDELLREANVMQQL-DNPYIVRMIGICE-AESWMLVMELAE 78 (257)
T ss_pred CcceEEeEEecCCCceEE-EEEEccCC-CCcHHH-----HHHHHHHHHHHHhC-CCCCcceEEEEEc-CCCcEEEEecCC
Confidence 899998753 4455555 77764211 111000 11245566666655 4568888888764 445689999877
Q ss_pred -cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 115 -PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 115 -~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.+|.++... .+.++..++..++.|++.
T Consensus 79 ~~~L~~~l~~-~~~~~~~~~~~i~~qi~~ 106 (257)
T cd05116 79 LGPLNKFLQK-NKHVTEKNITELVHQVSM 106 (257)
T ss_pred CCcHHHHHHh-cCCCCHHHHHHHHHHHHH
Confidence 468776543 467999999999999864
No 314
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=96.87 E-value=0.011 Score=43.13 Aligned_cols=96 Identities=22% Similarity=0.123 Sum_probs=70.1
Q ss_pred ccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccCc-
Q psy16459 37 FGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLGP- 115 (143)
Q Consensus 37 fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG~- 115 (143)
+|.||++.+.++++.+ ++|.-.....- . ....+..|+..+..+ ..++++.++.++..+...+++|+.+..
T Consensus 12 ~~~v~~~~~~~~~~~~-~iK~~~~~~~~-~------~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 82 (225)
T smart00221 12 FGKVYLARDKGTGELV-AVKVLKKEKTE-K------QREEFLREIRILKKL-KHPNIVKLYGVFEDPEPLYLVMEYCEGG 82 (225)
T ss_pred CeEEEEEEEcCCCcEE-EEEeeccccch-H------HHHHHHHHHHHHHhC-CCCChhhheeeeecCCceEEEEeccCCC
Confidence 8899999998888877 77776432211 0 112456677777666 457899999999988999999999876
Q ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHh
Q psy16459 116 SLEDLFDLCNRKFTLKTVLMIAIQLE 141 (143)
Q Consensus 116 sL~~l~~~~~~~fs~~T~~~ia~q~l 141 (143)
+|.++.......++...+..++.|++
T Consensus 83 ~L~~~~~~~~~~~~~~~~~~~~~~l~ 108 (225)
T smart00221 83 DLFDYLRKKGGKLSEEEARFYLRQIL 108 (225)
T ss_pred CHHHHHHhcccCCCHHHHHHHHHHHH
Confidence 99888776422278888888887765
No 315
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=96.83 E-value=0.012 Score=45.98 Aligned_cols=95 Identities=15% Similarity=0.159 Sum_probs=63.2
Q ss_pred EccceeeccCCC--CCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEee--ecCCeeEEeec
Q psy16459 36 FFGKVMDKTDKP--SGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFG--PCGKYNALVME 111 (143)
Q Consensus 36 ~fG~vy~v~d~~--~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G--~~~~~~~iVM~ 111 (143)
+||.||++.+.+ ++..+ |+|.-. . .........|+.++.++.. +++.+++++. ..+...|+||+
T Consensus 13 ~~g~Vy~~~~~~~~~~~~~-a~k~~~-~---------~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07867 13 TYGHVYKAKRKDGKDEKEY-ALKQIE-G---------TGISMSACREIALLRELKH-PNVIALQKVFLSHSDRKVWLLFD 80 (317)
T ss_pred CCeeEEEEEecCCCccceE-EEEEec-C---------CCCcHHHHHHHHHHHhCCC-CCeeeEEEEEeccCCCeEEEEEe
Confidence 399999998654 33445 666431 1 1112235568888877654 4666666654 34567899999
Q ss_pred ccCcCHHHHHHhc--------CCCCCHHHHHHHHHHHhc
Q psy16459 112 LLGPSLEDLFDLC--------NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 112 LlG~sL~~l~~~~--------~~~fs~~T~~~ia~q~l~ 142 (143)
.++.+|.++.... ...++..++..++.|+++
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~ 119 (317)
T cd07867 81 YAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILD 119 (317)
T ss_pred eeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHH
Confidence 9999998876432 235888888899988764
No 316
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=96.82 E-value=0.0032 Score=47.69 Aligned_cols=111 Identities=15% Similarity=0.070 Sum_probs=71.7
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEE-ecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVL-SLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~-Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
|.+.+.++..+ ||.||+|.+..++..+ ++++ ... ...+.. .........|..++..+ ..+++++
T Consensus 2 y~i~~~ig~g~---------~g~v~~~~~~~~~~~~-~~~~~~~~--~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~ 66 (260)
T cd08222 2 YILQQRLGKGS---------FGTVYLVKDKKAVAEE-RLKVLKEI--PVGELN--PNETVQANQEAQLLSKL-DHPAIVK 66 (260)
T ss_pred ceeeeeecCCC---------CceEEEEEecCCCCcc-eEEEeccc--cccccC--cchHHHHHHHHHHHHhC-CCCcHHH
Confidence 55666675544 9999999988776655 3333 210 000000 00111234466666555 4568888
Q ss_pred EEEeeecCCeeEEeeccc-CcCHHHHHHhc---CCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCGKYNALVMELL-GPSLEDLFDLC---NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~~---~~~fs~~T~~~ia~q~l~ 142 (143)
+++...++...++||+.+ |.+|.++.... +..++......++.|+++
T Consensus 67 ~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 117 (260)
T cd08222 67 FHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLL 117 (260)
T ss_pred HHHHHhcCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHH
Confidence 888888888899999986 57998876542 567899999988888754
No 317
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=96.82 E-value=0.0078 Score=54.61 Aligned_cols=88 Identities=14% Similarity=0.097 Sum_probs=63.8
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-C
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL-G 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll-G 114 (143)
.||.||++.+..++..+ |+|.-.. . ......|+.++.++ .-+++.+++++...+...|+|||.+ |
T Consensus 702 ~~g~Vy~~~~~~~~~~v-avK~~~~----------~--~~~~~~~~~~l~~l-~HpnIv~~~~~~~~~~~~~lv~Ey~~~ 767 (968)
T PLN00113 702 KKGASYKGKSIKNGMQF-VVKEIND----------V--NSIPSSEIADMGKL-QHPNIVKLIGLCRSEKGAYLIHEYIEG 767 (968)
T ss_pred CCeeEEEEEECCCCcEE-EEEEccC----------C--ccccHHHHHHHhhC-CCCCcceEEEEEEcCCCCEEEEeCCCC
Confidence 48999999998888877 6664210 0 01123345555555 4578999999999999999999988 6
Q ss_pred cCHHHHHHhcCCCCCHHHHHHHHHHHh
Q psy16459 115 PSLEDLFDLCNRKFTLKTVLMIAIQLE 141 (143)
Q Consensus 115 ~sL~~l~~~~~~~fs~~T~~~ia~q~l 141 (143)
.+|.++.+ .++.....+++.|+.
T Consensus 768 g~L~~~l~----~l~~~~~~~i~~~ia 790 (968)
T PLN00113 768 KNLSEVLR----NLSWERRRKIAIGIA 790 (968)
T ss_pred CcHHHHHh----cCCHHHHHHHHHHHH
Confidence 89998764 367777888888764
No 318
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=96.82 E-value=0.0038 Score=47.51 Aligned_cols=98 Identities=21% Similarity=0.201 Sum_probs=63.5
Q ss_pred EccceeeccCCCCCCc--e----eEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEe
Q psy16459 36 FFGKVMDKTDKPSGGG--Y----QALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALV 109 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~--~----~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iV 109 (143)
+||.||++.+..+++. + .+++.- ..+-... .-....|..++.++ .-+++..+++....+...++|
T Consensus 7 ~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~--~~~~~~~------~~~~~~e~~~l~~~-~h~~iv~~~~~~~~~~~~~lv 77 (258)
T cd05078 7 TFTKIFKGIRREVGDYGELHKTEVLLKVL--DKSHRNY------SESFFEAASMMSQL-SHKHLVLNYGVCVCGDESIMV 77 (258)
T ss_pred cchhheeeeecccccccccccchhhHHhh--cchhHHH------HHHHHHHHHHHHhC-CCCChhheeeEEEeCCCcEEE
Confidence 4899999987665543 1 122221 0000000 01233455555554 457888999998888899999
Q ss_pred ecccC-cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 110 MELLG-PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 110 M~LlG-~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
||.+. .+|.+.....+..++....+.++.|++.
T Consensus 78 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~ 111 (258)
T cd05078 78 QEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAW 111 (258)
T ss_pred EecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence 99885 5788876655557899999989888764
No 319
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=96.81 E-value=0.02 Score=43.68 Aligned_cols=98 Identities=16% Similarity=0.098 Sum_probs=62.2
Q ss_pred EccceeeccCCCC--CCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc
Q psy16459 36 FFGKVMDKTDKPS--GGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL 113 (143)
Q Consensus 36 ~fG~vy~v~d~~~--~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll 113 (143)
+||.||++.+.++ ...+ +++.-....+.... .....|+.++.++. .++++++++......+.++|||.+
T Consensus 7 ~~g~Vy~~~~~~~~~~~~~-~~k~~~~~~~~~~~-------~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~ 77 (269)
T cd05087 7 WFGKVILGEVNSGYTPAQV-VVKELRVSASVQEQ-------MKFLEEAQPYRSLQ-HSNLLQCLGQCTEVTPYLLVMEFC 77 (269)
T ss_pred CCceEEEEEEcCCCCceEE-EEEecCCCCChHHH-------HHHHHHHHHHHhCC-CCCEeeEEEEEcCCCCcEEEEECC
Confidence 3899999875432 2334 44431111111110 12455777777664 468889999888888999999997
Q ss_pred C-cCHHHHHHhc----CCCCCHHHHHHHHHHHhc
Q psy16459 114 G-PSLEDLFDLC----NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 114 G-~sL~~l~~~~----~~~fs~~T~~~ia~q~l~ 142 (143)
. .+|.++.... ...++..++..++.|+++
T Consensus 78 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~ 111 (269)
T cd05087 78 PLGDLKGYLRSCRKAELMTPDPTTLQRMACEIAL 111 (269)
T ss_pred CCCcHHHHHHHhhhcccccccHHHHHHHHHHHHH
Confidence 5 6898776542 235677788888888753
No 320
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=96.78 E-value=0.027 Score=44.03 Aligned_cols=110 Identities=13% Similarity=0.082 Sum_probs=72.6
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCce---eEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCC
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGY---QALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNK 91 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~---~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~ 91 (143)
.++.+++.++.++ ||.||++.+..+++.+ .++|.... +..... ......|+.++..+ ..+
T Consensus 7 ~~~~~~~~lg~G~---------~g~vy~~~~~~~~~~~~~~vaiK~~~~--~~~~~~-----~~~~~~e~~~~~~l-~h~ 69 (303)
T cd05110 7 TELKRVKVLGSGA---------FGTVYKGIWVPEGETVKIPVAIKILNE--TTGPKA-----NVEFMDEALIMASM-DHP 69 (303)
T ss_pred hhceeccccccCC---------CccEEEEEEecCCCcceeeEEEEeccc--cCCHHH-----HHHHHHHHHHHHhC-CCC
Confidence 3667777776655 9999999888777643 36665421 111100 11245577776666 457
Q ss_pred cccEEEEeeecCCeeEEeecccC-cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 92 GIPEVYYFGPCGKYNALVMELLG-PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 92 ~~P~l~~~G~~~~~~~iVM~LlG-~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++.++++....+ ..+++|+.+. .+|.+........++...+..++.|++.
T Consensus 70 niv~~~~~~~~~-~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~ 120 (303)
T cd05110 70 HLVRLLGVCLSP-TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAK 120 (303)
T ss_pred CcccEEEEEcCC-CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHH
Confidence 888888876554 4567777764 5788876655567899999999998763
No 321
>KOG0594|consensus
Probab=96.74 E-value=0.015 Score=47.33 Aligned_cols=100 Identities=19% Similarity=0.114 Sum_probs=78.7
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCC------eeEEe
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGK------YNALV 109 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~------~~~iV 109 (143)
.||.||++.++.+++.+ |+|.=.+-. +.-+-..+...|+.++..+....|+-.++++=..++ .-++|
T Consensus 23 tyg~Vykar~~~~g~~V-ALKkirl~~------~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lv 95 (323)
T KOG0594|consen 23 TYGVVYKARSKRTGKFV-ALKKIRLEF------EEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLV 95 (323)
T ss_pred CceEEEEEEEecCCCEE-EEEEEeccc------cccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEE
Confidence 49999999999999877 776543211 111234567789999999988877888888877766 78899
Q ss_pred ecccCcCHHHHHHhcC---CCCCHHHHHHHHHHHhc
Q psy16459 110 MELLGPSLEDLFDLCN---RKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 110 M~LlG~sL~~l~~~~~---~~fs~~T~~~ia~q~l~ 142 (143)
++.+-.+|.++....+ +..+..++..+..|+|+
T Consensus 96 fe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~ 131 (323)
T KOG0594|consen 96 FEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLR 131 (323)
T ss_pred EEeecccHHHHHHhccccccCCCHHHHHHHHHHHHH
Confidence 9999999999988874 46788889999999874
No 322
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=96.69 E-value=0.027 Score=43.30 Aligned_cols=106 Identities=22% Similarity=0.150 Sum_probs=69.1
Q ss_pred eeeeeccCCCCCCCCceEEEccceeec----cCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCc
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDK----TDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKG 92 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v----~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~ 92 (143)
+.+++.++..+ ||.||.+ ....++..+ |+|+.....+- .. ......|+.++..+ ..++
T Consensus 6 ~~~~~~lg~g~---------~g~v~~~~~~~~~~~~~~~v-aiK~~~~~~~~-~~------~~~~~~E~~~l~~l-~h~~ 67 (283)
T cd05080 6 LKKIRVLGEGH---------FGKVSLYCYDPANDGTGEMV-AVKTLKRECGQ-QN------TSGWKKEINILKTL-YHEN 67 (283)
T ss_pred ceeceecccCC---------CcEEEEeeEccccCCCCceE-EEEEeccccCh-HH------HHHHHHHHHHHHhC-CCCC
Confidence 36677775543 8888654 344455545 88886432110 00 11245688877776 4568
Q ss_pred ccEEEEeeec--CCeeEEeecccC-cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 93 IPEVYYFGPC--GKYNALVMELLG-PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 93 ~P~l~~~G~~--~~~~~iVM~LlG-~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++++++... +.+.|+|||.+. .+|.++... ..++...+..++.|++.
T Consensus 68 i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~--~~l~~~~~~~i~~~l~~ 118 (283)
T cd05080 68 IVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPK--HKLNLAQLLLFAQQICE 118 (283)
T ss_pred EeeEEEEEecCCCceEEEEecCCCCCCHHHHHHH--cCCCHHHHHHHHHHHHH
Confidence 8888887654 457899999764 577776543 56999999999998763
No 323
>PHA03210 serine/threonine kinase US3; Provisional
Probab=96.65 E-value=0.005 Score=52.33 Aligned_cols=118 Identities=14% Similarity=0.074 Sum_probs=72.0
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEE---EecCCCCHHH--HHHHh--C--CCcchHHHHHHHH
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALV---LSLLGPSLQD--LFELC--G--FRFSLKTVLMIAQ 85 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~---~Ellg~sl~~--l~~~~--~--~~~sL~tE~~v~~ 85 (143)
..|.+++.++.++ ||.||.+......+...+.+ ....|..... +.+.. . ....+..|+.++.
T Consensus 148 ~~Y~ii~~LG~G~---------fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~ 218 (501)
T PHA03210 148 AHFRVIDDLPAGA---------FGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALG 218 (501)
T ss_pred hccEEEeEecCCC---------CcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHH
Confidence 4688888887655 99999876544433332221 0000000000 00100 0 0123567888877
Q ss_pred hhhcCCcccEEEEeeecCCeeEEeecccCcCHHHHHHhc----CCCCCHHHHHHHHHHHhc
Q psy16459 86 QLQSNKGIPEVYYFGPCGKYNALVMELLGPSLEDLFDLC----NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 86 ql~~~~~~P~l~~~G~~~~~~~iVM~LlG~sL~~l~~~~----~~~fs~~T~~~ia~q~l~ 142 (143)
++. -+++++++++...+.+.|+||+.++.+|.+..... ....+...+..++.|++.
T Consensus 219 ~l~-HpnIv~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~ 278 (501)
T PHA03210 219 RLN-HENILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLC 278 (501)
T ss_pred hCC-CCCcCcEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHH
Confidence 764 46899999999999999999999998887654321 234556777788888754
No 324
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=96.61 E-value=0.036 Score=42.34 Aligned_cols=99 Identities=24% Similarity=0.206 Sum_probs=66.3
Q ss_pred EccceeeccCC--CCCCce-eEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecc
Q psy16459 36 FFGKVMDKTDK--PSGGGY-QALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMEL 112 (143)
Q Consensus 36 ~fG~vy~v~d~--~~~~~~-~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~L 112 (143)
.||.||.+... .+.... -++++=....+-.+. -.+..|+..+.++ ..+++.+++++-......++|||.
T Consensus 11 ~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~-------~~~~~e~~~l~~l-~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 11 SFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEE-------EEFLNEIQILRKL-RHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp SSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHH-------HHHHHHHHHHHTH-SBTTBE-EEEEEESSSSEEEEEE-
T ss_pred CCcEEEEEEEEcccCCCCEEEEEEEeccccccccc-------eeeeecccccccc-cccccccccccccccccccccccc
Confidence 49999998776 222222 133332111111111 1245578888877 677999999999977779999999
Q ss_pred cC-cCHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 113 LG-PSLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 113 lG-~sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
+- -+|.+..... ...++..+...++.|+.+
T Consensus 83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~ 114 (259)
T PF07714_consen 83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAE 114 (259)
T ss_dssp -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccc
Confidence 84 5899987776 788999999999999764
No 325
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=96.59 E-value=0.032 Score=42.65 Aligned_cols=65 Identities=20% Similarity=0.122 Sum_probs=49.4
Q ss_pred hHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccCc-CHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 77 LKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLGP-SLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 77 L~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG~-sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
...|+.++.++ ..++++++++++..+...++|||.++. +|..+.......++...+..++.|+++
T Consensus 51 ~~~~~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~ 116 (262)
T cd05077 51 FFETASMMRQV-SHKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLAS 116 (262)
T ss_pred HHHHHHHHHhC-CCCCEeeEEEEEecCCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 34455555444 457999999999998899999999874 666655444567999999999999864
No 326
>KOG0600|consensus
Probab=96.54 E-value=0.011 Score=50.58 Aligned_cols=97 Identities=23% Similarity=0.213 Sum_probs=72.5
Q ss_pred ccceeeccCCCCCCceeEE-EEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeec--CCeeEEeeccc
Q psy16459 37 FGKVMDKTDKPSGGGYQAL-VLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPC--GKYNALVMELL 113 (143)
Q Consensus 37 fG~vy~v~d~~~~~~~~a~-~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~--~~~~~iVM~Ll 113 (143)
||+||+++|..|++-+ || |+-+.. ...+-......|+.|+.++... ++-++...=.. ...-|||.|..
T Consensus 130 yg~VYkAr~~~tgkiv-ALKKvr~d~-------~~~~~~~t~~REI~ILr~l~Hp-NIikL~eivt~~~~~siYlVFeYM 200 (560)
T KOG0600|consen 130 YGQVYKARDLETGKIV-ALKKVRFDN-------EKEGFPITAIREIKILRRLDHP-NIIKLEEIVTSKLSGSIYLVFEYM 200 (560)
T ss_pred hhheeEeeecccCcEE-EEEEeeccc-------CCCcchHHHHHHHHHHHhcCCC-cccceeeEEEecCCceEEEEEecc
Confidence 9999999999999988 55 443321 1122344577899999888653 45555554433 36899999999
Q ss_pred CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 114 GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 114 G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
--+|.-|...-+=+||..-+-++..|+|+
T Consensus 201 dhDL~GLl~~p~vkft~~qIKc~mkQLl~ 229 (560)
T KOG0600|consen 201 DHDLSGLLSSPGVKFTEPQIKCYMKQLLE 229 (560)
T ss_pred cchhhhhhcCCCcccChHHHHHHHHHHHH
Confidence 99999987765779999999999999874
No 327
>PRK09188 serine/threonine protein kinase; Provisional
Probab=96.54 E-value=0.015 Score=48.05 Aligned_cols=93 Identities=15% Similarity=0.115 Sum_probs=62.1
Q ss_pred ccceeeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCH--HHHHHHhCCCcchHHHHHHHHh
Q psy16459 9 SMSLLKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSL--QDLFELCGFRFSLKTVLMIAQQ 86 (143)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl--~~l~~~~~~~~sL~tE~~v~~q 86 (143)
++.-+-..|.+...++.++ ||.||++.+..+.+.+.|+|.-....+. .+. ....+..|+.++.+
T Consensus 12 ~~~~~~~~Y~~~~~IG~G~---------fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~-----~~~~~~~E~~iL~~ 77 (365)
T PRK09188 12 QIPALSARFVETAVLKRDV---------FSTVERGYFAGDPGTARAVRRRVSEVPWWSKPL-----ARHLAAREIRALKT 77 (365)
T ss_pred ccccccCCceEccEEeecC---------cEEEEEEEEcCCCCeEEEEEEecccccccccHH-----HHHHHHHHHHHHHh
Confidence 3444555677777776544 9999999888755555588753211000 010 01237889999999
Q ss_pred hhcCCcccEEEEeeecCCeeEEeeccc-CcCHHH
Q psy16459 87 LQSNKGIPEVYYFGPCGKYNALVMELL-GPSLED 119 (143)
Q Consensus 87 l~~~~~~P~l~~~G~~~~~~~iVM~Ll-G~sL~~ 119 (143)
+.....+|.+++.| ..|+|||++ |.+|..
T Consensus 78 L~h~~iv~~l~~~~----~~~LVmE~~~G~~L~~ 107 (365)
T PRK09188 78 VRGIGVVPQLLATG----KDGLVRGWTEGVPLHL 107 (365)
T ss_pred ccCCCCCcEEEEcC----CcEEEEEccCCCCHHH
Confidence 98777788888764 369999998 688863
No 328
>KOG0592|consensus
Probab=96.48 E-value=0.013 Score=50.51 Aligned_cols=99 Identities=18% Similarity=0.167 Sum_probs=77.0
Q ss_pred EccceeeccCCCCCCceeEEE-EecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccC
Q psy16459 36 FFGKVMDKTDKPSGGGYQALV-LSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLG 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~-~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG 114 (143)
+|..||.+.++.++..| |+| ++- ..+.+ -.+.--...|-.++.+|.+-+||-++|.--+++..-|+|+++.-
T Consensus 85 SYStV~~A~~~~t~keY-AiKVl~K-----~~Iik-e~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe~A~ 157 (604)
T KOG0592|consen 85 SYSTVVLAREKATGKEY-AIKVLDK-----RYIIK-EKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVLEYAP 157 (604)
T ss_pred cceeEEEeeecCCCcee-eHhhhhH-----HHHHh-hcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEEEecC
Confidence 36669999999999999 554 431 11111 13344567788888889899999999999999999999999985
Q ss_pred -cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 115 -PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 115 -~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
-+|-++.+.. +.|...++-..|.|+|+
T Consensus 158 nGdll~~i~K~-Gsfde~caR~YAAeIld 185 (604)
T KOG0592|consen 158 NGDLLDLIKKY-GSFDETCARFYAAEILD 185 (604)
T ss_pred CCcHHHHHHHh-CcchHHHHHHHHHHHHH
Confidence 3676766665 99999999999999875
No 329
>KOG0587|consensus
Probab=96.46 E-value=0.033 Score=50.49 Aligned_cols=95 Identities=17% Similarity=0.135 Sum_probs=72.5
Q ss_pred ccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeec-----CCeeEEeec
Q psy16459 37 FGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPC-----GKYNALVME 111 (143)
Q Consensus 37 fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~-----~~~~~iVM~ 111 (143)
+|+||++....++..- |+|+--...+ ..-..+.|..++......++++.+++++.. ++--|+|||
T Consensus 32 ygkv~k~k~~~~~~~a-a~kI~~~~~d---------~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVME 101 (953)
T KOG0587|consen 32 YGKVYKGRHVKTGQLA-AIKIMDPTED---------EEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVME 101 (953)
T ss_pred ceeEEEEeeeecCcee-eeEeecCCcc---------ccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEee
Confidence 8889999888888876 6655321111 123577888899888888999999999864 357899999
Q ss_pred ccCc-CHHHHHHhc-CCCCCHHHHHHHHHHHh
Q psy16459 112 LLGP-SLEDLFDLC-NRKFTLKTVLMIAIQLE 141 (143)
Q Consensus 112 LlG~-sL~~l~~~~-~~~fs~~T~~~ia~q~l 141 (143)
++|- |..||-+-. +.+..-.-..+|.+..|
T Consensus 102 fC~gGSVTDLVKn~~g~rl~E~~IaYI~re~l 133 (953)
T KOG0587|consen 102 FCGGGSVTDLVKNTKGNRLKEEWIAYILREIL 133 (953)
T ss_pred ccCCccHHHHHhhhcccchhhHHHHHHHHHHH
Confidence 9995 999997776 88888777777766654
No 330
>KOG0583|consensus
Probab=96.43 E-value=0.031 Score=46.13 Aligned_cols=118 Identities=17% Similarity=0.068 Sum_probs=82.6
Q ss_pred ceeeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcC
Q psy16459 11 SLLKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSN 90 (143)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~ 90 (143)
..+.+.+.+.+.++.+. ||+||.+.+..++..+ |+|+-- ........ ......++.|+.++..+..-
T Consensus 13 ~~~~g~y~~~~~lG~Gs---------fgkV~~a~~~~t~~~v-AiKii~--~~~~~~~~-~~~~~~i~rEi~~~~~~~~H 79 (370)
T KOG0583|consen 13 QLSIGKYELGRTLGSGS---------FGKVKLAKHRLTGEKV-AIKIID--RKKVSSKS-QKLDELIKREISILRRLRSH 79 (370)
T ss_pred ccccCceeeeeeecCCC---------CeeEEEeeeccCCCeE-EEEEec--hhcccccc-cccchhhHHHHHHHHHhccC
Confidence 35566777777775544 9999999999999877 777531 11000000 01122355788888888766
Q ss_pred CcccEEEEeeecCCeeEEeecccCc-CHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 91 KGIPEVYYFGPCGKYNALVMELLGP-SLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 91 ~~~P~l~~~G~~~~~~~iVM~LlG~-sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++.+++.+=......|+|||.+-. +|-+.... .++++-..+-++-.|+++
T Consensus 80 pnI~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlis 131 (370)
T KOG0583|consen 80 PNIIRLLEVFATPTKIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLIS 131 (370)
T ss_pred CCEeEEEEEEecCCeEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHH
Confidence 7999999999998889999999875 55555444 588888888777777764
No 331
>KOG0597|consensus
Probab=96.43 E-value=0.01 Score=51.82 Aligned_cols=98 Identities=19% Similarity=0.130 Sum_probs=76.3
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccCc
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLGP 115 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG~ 115 (143)
+||.||+++.+.|.+.+....+.-.|++-.++. ++..|+++...+.. +++-+++++-.....-|+|.|+.--
T Consensus 14 sfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~-------~l~~ev~i~r~lkH-pniv~m~esfEt~~~~~vVte~a~g 85 (808)
T KOG0597|consen 14 SFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELK-------NLRQEVRILRSLKH-PNIVEMLESFETSAHLWVVTEYAVG 85 (808)
T ss_pred ccceeeecccccceeEEEEEEehhcCCchHHHH-------HHHHHHHHHHhcCC-cchhhHHHhhcccceEEEEehhhhh
Confidence 499999999999999884445555555544443 37789999887754 4677888888888899999999866
Q ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 116 SLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 116 sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+|..+... .+++.-..+..||+|.++
T Consensus 86 ~L~~il~~-d~~lpEe~v~~~a~~LVs 111 (808)
T KOG0597|consen 86 DLFTILEQ-DGKLPEEQVRAIAYDLVS 111 (808)
T ss_pred hHHHHHHh-ccCCCHHHHHHHHHHHHH
Confidence 77776654 588999999999999865
No 332
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=96.37 E-value=0.089 Score=39.72 Aligned_cols=96 Identities=17% Similarity=0.017 Sum_probs=62.9
Q ss_pred EccceeeccCCCCC---CceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecc
Q psy16459 36 FFGKVMDKTDKPSG---GGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMEL 112 (143)
Q Consensus 36 ~fG~vy~v~d~~~~---~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~L 112 (143)
.||.||++.+..++ ..+ ++|.-...... .. ......|+.++.++ ..+++.+++++... ...++||+.
T Consensus 7 ~~g~v~~~~~~~~~~~~~~~-~iK~~~~~~~~-~~------~~~~~~e~~~l~~l-~h~~iv~~~~~~~~-~~~~~v~e~ 76 (257)
T cd05060 7 NFGSVVKGVYLMKSGKEVEV-AVKTLKQEHIA-AG------KKEFLREASVMAQL-DHPCIVRLIGVCKG-EPLMLVMEL 76 (257)
T ss_pred CceeEEEeEeeccCCCcceE-EEEecccccch-HH------HHHHHHHHHHHHhc-CCCCeeeEEEEEcC-CceEEEEEe
Confidence 38999988766655 334 77664321111 11 11245577777766 34678888877654 456899998
Q ss_pred c-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 113 L-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 113 l-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
. |.+|.+..... +.++..++..++.|++.
T Consensus 77 ~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~ 106 (257)
T cd05060 77 APLGPLLKYLKKR-REIPVSDLKELAHQVAM 106 (257)
T ss_pred CCCCcHHHHHHhC-CCCCHHHHHHHHHHHHH
Confidence 6 45888766543 57899999999999764
No 333
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=96.36 E-value=0.065 Score=45.61 Aligned_cols=113 Identities=15% Similarity=0.034 Sum_probs=69.3
Q ss_pred eeeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHHHhCCCcchHHHHHHHHhhhcC
Q psy16459 12 LLKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFELCGFRFSLKTVLMIAQQLQSN 90 (143)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~~~~~~~sL~tE~~v~~ql~~~ 90 (143)
.....|.+.+.++.++ ||.||++.+..++..| |+|.-.. +.+-.+. .....|+.++..+..
T Consensus 29 ~~~~rY~i~~~LG~G~---------fG~Vy~a~~~~~g~~v-AvK~i~~~~~~~~~~-------~~~~~Ei~~l~~~~h- 90 (496)
T PTZ00283 29 EQAKKYWISRVLGSGA---------TGTVLCAKRVSDGEPF-AVKVVDMEGMSEADK-------NRAQAEVCCLLNCDF- 90 (496)
T ss_pred ccCCCEEEEEEEecCC---------CEEEEEEEEcCCCCEE-EEEEEecccCCHHHH-------HHHHHHHHHHhcCCC-
Confidence 3446888888886655 9999999999998888 7776322 1111111 123445555543311
Q ss_pred CcccEEEEeeec--------CCeeEEeecccC-cCHHHHHHhc---CCCCCHHHHHHHHHHHhc
Q psy16459 91 KGIPEVYYFGPC--------GKYNALVMELLG-PSLEDLFDLC---NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 91 ~~~P~l~~~G~~--------~~~~~iVM~LlG-~sL~~l~~~~---~~~fs~~T~~~ia~q~l~ 142 (143)
+++.+++..-.. ..+.++|||.+. .+|.+..+.. .+.|+...+..++.|+++
T Consensus 91 ~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~ 154 (496)
T PTZ00283 91 FSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLL 154 (496)
T ss_pred CcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHH
Confidence 222232221111 124679999874 6888765432 467999999999998864
No 334
>smart00090 RIO RIO-like kinase.
Probab=96.35 E-value=0.018 Score=44.51 Aligned_cols=101 Identities=17% Similarity=0.068 Sum_probs=62.9
Q ss_pred Eccceeecc-CCCCCCceeEEEEecCCCCH-HHHHHHh--CC-------------CcchHHHHHHHHhhhc-CCcccEEE
Q psy16459 36 FFGKVMDKT-DKPSGGGYQALVLSLLGPSL-QDLFELC--GF-------------RFSLKTVLMIAQQLQS-NKGIPEVY 97 (143)
Q Consensus 36 ~fG~vy~v~-d~~~~~~~~a~~~Ellg~sl-~~l~~~~--~~-------------~~sL~tE~~v~~ql~~-~~~~P~l~ 97 (143)
+||.||.+. +..++..+ |+|.-..+..- .+..... .. ...++.|..++.++.. ..++|+.+
T Consensus 40 ~~g~Vy~a~~~~~~g~~v-aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~~~i~~p~~~ 118 (237)
T smart00090 40 KEANVYHALDFDGSGKER-AVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYEAGVPVPKPI 118 (237)
T ss_pred cceeEEEEEecCCCCcEE-EEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCeee
Confidence 389999998 66677766 88876543210 0000000 00 0125679999999875 45789988
Q ss_pred EeeecCCeeEEeecccCc-CHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 98 YFGPCGKYNALVMELLGP-SLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 98 ~~G~~~~~~~iVM~LlG~-sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
..+ ..|+|||.++. +|..... ....+...++..++.|+++
T Consensus 119 ~~~----~~~lV~E~~~g~~L~~~~~-~~~~~~~~~~~~i~~qi~~ 159 (237)
T smart00090 119 AWR----RNVLVMEFIGGDGLPAPRL-KDVEPEEEEEFELYDDILE 159 (237)
T ss_pred Eec----CceEEEEEecCCccccccc-ccCCcchHHHHHHHHHHHH
Confidence 764 25899999987 4554321 1345666677778877653
No 335
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=96.33 E-value=0.043 Score=42.78 Aligned_cols=97 Identities=20% Similarity=0.067 Sum_probs=69.3
Q ss_pred ccceeeccCCCCCCceeEEEEecCC-CCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccC-
Q psy16459 37 FGKVMDKTDKPSGGGYQALVLSLLG-PSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLG- 114 (143)
Q Consensus 37 fG~vy~v~d~~~~~~~~a~~~Ellg-~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG- 114 (143)
+|.||.+.+..++..+ |+|.-... .+... ...+..|+.++.++. .+++.++++....+...|++|+.+.
T Consensus 13 ~~~v~~~~~~~~~~~~-avK~~~~~~~~~~~-------~~~~~~Ei~~l~~l~-h~~i~~~~~~~~~~~~~~~~~e~~~~ 83 (314)
T cd08216 13 LMIVHLAKHKPTNTLV-AVKKINLDSCSKED-------LKLLQQEIITSRQLQ-HPNILPYVTSFIVDSELYVVSPLMAY 83 (314)
T ss_pred CceEEEEEecCCCCEE-EEEEEeccccchhH-------HHHHHHHHHHHHhcC-CcchhhhhheeecCCeEEEEEeccCC
Confidence 4556777777777777 77664322 11111 123677888888775 4577788888888889999999986
Q ss_pred cCHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 115 PSLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 115 ~sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
.+|.++.... ...++...+..++.|+++
T Consensus 84 ~~l~~~l~~~~~~~~~~~~~~~~~~~l~~ 112 (314)
T cd08216 84 GSCEDLLKTHFPEGLPELAIAFILKDVLN 112 (314)
T ss_pred CCHHHHHHHhcccCCCHHHHHHHHHHHHH
Confidence 6888887765 677999999999988764
No 336
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=96.08 E-value=0.031 Score=43.43 Aligned_cols=95 Identities=13% Similarity=0.109 Sum_probs=62.0
Q ss_pred eeeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHH---hCCCcchHHHHHHHHhhh
Q psy16459 12 LLKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFEL---CGFRFSLKTVLMIAQQLQ 88 (143)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~---~~~~~sL~tE~~v~~ql~ 88 (143)
.|.+++.+++.+...| ||.||.+.+ +++.+ ++|.-. +........ .-+..-.+.|+..+.++
T Consensus 28 ~l~~~y~~~~~l~~~~---------f~~v~l~~~--~~~~~-iiKvf~--~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL- 92 (232)
T PRK10359 28 FLSYNIKTIKVFRNID---------DTKVSLIDT--DYGKY-ILKVFA--PKVKRTERFLKSFVKGDYYENLIVQTDRV- 92 (232)
T ss_pred HhhCceEEEEEecCCC---------ceEEEEEec--CCCcE-EEEEec--hhcCchHHHHHhhhhhHHHHHHHHHHHHH-
Confidence 3677888999887655 999999755 35566 888653 221111110 00112257888888777
Q ss_pred cCCcccEEEEeeecC--------CeeEEeecccC-cCHHHHH
Q psy16459 89 SNKGIPEVYYFGPCG--------KYNALVMELLG-PSLEDLF 121 (143)
Q Consensus 89 ~~~~~P~l~~~G~~~--------~~~~iVM~LlG-~sL~~l~ 121 (143)
..+|+|....++... ...++|||.+. .+|.++.
T Consensus 93 ~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~ 134 (232)
T PRK10359 93 RSEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMP 134 (232)
T ss_pred HHCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhh
Confidence 445888888876633 35899999986 7898763
No 337
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=96.01 E-value=0.082 Score=40.36 Aligned_cols=99 Identities=15% Similarity=0.033 Sum_probs=59.8
Q ss_pred EccceeeccCCCCCCc-eeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccC
Q psy16459 36 FFGKVMDKTDKPSGGG-YQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLG 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~-~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG 114 (143)
+||.||++.+.++... ..+++.-....+... .-....|+.++..+ .-+++.++++......+.|+|||.+.
T Consensus 7 ~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~-------~~~~~~e~~~~~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (268)
T cd05086 7 WFGKVLLSEIYTDTGVARVVVKELKANASSKE-------QNEFLQQGDPYRIL-QHPNILQCLGQCVEAIPYLLVFEYCE 78 (268)
T ss_pred cCceEEEEEEEcCCCcceEEEEEecCCCChHH-------HHHHHHHHHHHhcc-CCcchhheEEEecCCCccEEEEecCC
Confidence 4899998865444332 223332111111111 01233444455443 45789999999998889999999985
Q ss_pred -cCHHHHHHhc---CCCCCHHHHHHHHHHHhc
Q psy16459 115 -PSLEDLFDLC---NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 115 -~sL~~l~~~~---~~~fs~~T~~~ia~q~l~ 142 (143)
.+|.+..... .+.++...+..++.|+++
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~ 110 (268)
T cd05086 79 LGDLKSYLSQEQWHRRNSQLLLLQRMACEIAA 110 (268)
T ss_pred CCcHHHHHHhhhcccccccHHHHHHHHHHHHH
Confidence 5888765543 245667777788887653
No 338
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=95.82 E-value=0.25 Score=37.32 Aligned_cols=97 Identities=11% Similarity=0.125 Sum_probs=61.5
Q ss_pred ccceeeccCCCCC---CceeEEEEecC-CCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCC------ee
Q psy16459 37 FGKVMDKTDKPSG---GGYQALVLSLL-GPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGK------YN 106 (143)
Q Consensus 37 fG~vy~v~d~~~~---~~~~a~~~Ell-g~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~------~~ 106 (143)
||.||.+.+..+. ..+ |+|.=.. ..+-.+. -....|+..+..+ ..+++.++++....+. +.
T Consensus 12 ~g~v~~~~~~~~~~~~~~v-aiK~~~~~~~~~~~~-------~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~ 82 (273)
T cd05035 12 FGSVMEGQLSQDDGSQLKV-AVKTMKLDIHTYSEI-------EEFLSEAACMKDF-DHPNVMKLIGVCFEASSLQKIPKP 82 (273)
T ss_pred CceEEEEEEecCCCCcceE-EEEEeccCcCCHHHH-------HHHHHHHHHHHhC-CCCCeeeEEeeeccCCccccCccc
Confidence 8999998866544 344 7765322 1111111 1245577766665 4568888888765443 47
Q ss_pred EEeeccc-CcCHHHHHHhc-----CCCCCHHHHHHHHHHHhc
Q psy16459 107 ALVMELL-GPSLEDLFDLC-----NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 107 ~iVM~Ll-G~sL~~l~~~~-----~~~fs~~T~~~ia~q~l~ 142 (143)
++||+.+ |.+|.++.... ...++..++..++.|++.
T Consensus 83 ~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~ 124 (273)
T cd05035 83 MVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIAL 124 (273)
T ss_pred EEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHH
Confidence 8898875 46888765332 246899999999998764
No 339
>PHA02988 hypothetical protein; Provisional
Probab=95.66 E-value=0.13 Score=39.95 Aligned_cols=96 Identities=15% Similarity=0.039 Sum_probs=64.7
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCC-HHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeec----CCeeEEee
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPS-LQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPC----GKYNALVM 110 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~s-l~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~----~~~~~iVM 110 (143)
++|.||++.+ ++..+ |+|.--.... ...+ ......|+.++.++.. +++.+++++... ..+.++||
T Consensus 32 ~~~~v~~~~~--~~~~v-avK~~~~~~~~~~~~------~~~~~~E~~~l~~l~h-~nIv~~~g~~~~~~~~~~~~~lv~ 101 (283)
T PHA02988 32 DQNSIYKGIF--NNKEV-IIRTFKKFHKGHKVL------IDITENEIKNLRRIDS-NNILKIYGFIIDIVDDLPRLSLIL 101 (283)
T ss_pred CceEEEEEEE--CCEEE-EEEeccccccccHHH------HHHHHHHHHHHHhcCC-CCEEEEeeeEEecccCCCceEEEE
Confidence 3778888876 34455 7765321100 0000 1234578888888754 589999988765 35789999
Q ss_pred cccCc-CHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 111 ELLGP-SLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 111 ~LlG~-sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
|.+.. +|.++... .+.++..+.+.++.|++.
T Consensus 102 Ey~~~g~L~~~l~~-~~~~~~~~~~~i~~~i~~ 133 (283)
T PHA02988 102 EYCTRGYLREVLDK-EKDLSFKTKLDMAIDCCK 133 (283)
T ss_pred EeCCCCcHHHHHhh-CCCCChhHHHHHHHHHHH
Confidence 98874 79887654 467899999999888753
No 340
>KOG0577|consensus
Probab=95.63 E-value=0.025 Score=49.85 Aligned_cols=86 Identities=19% Similarity=0.118 Sum_probs=63.2
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccCc
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLGP 115 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG~ 115 (143)
+||.||.+.|..|.+...+-||..-|+--.+.+. .+--|++++.++.. |+.-.+-++--.+.-.|+||+.+--
T Consensus 38 SFGAVYfArd~~n~evVAIKKMsySGKQs~EKWq------DIlKEVrFL~~l~H-PntieYkgCyLre~TaWLVMEYClG 110 (948)
T KOG0577|consen 38 SFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQ------DILKEVRFLRQLRH-PNTIEYKGCYLREHTAWLVMEYCLG 110 (948)
T ss_pred ccceeEEeeccCccceeeeeeccccccccHHHHH------HHHHHHHHHHhccC-CCcccccceeeccchHHHHHHHHhc
Confidence 5999999999999999977899988765444332 13347777776644 3444555566677889999999998
Q ss_pred CHHHHHHhcCCCC
Q psy16459 116 SLEDLFDLCNRKF 128 (143)
Q Consensus 116 sL~~l~~~~~~~f 128 (143)
|-+||..-..+.+
T Consensus 111 SAsDlleVhkKpl 123 (948)
T KOG0577|consen 111 SASDLLEVHKKPL 123 (948)
T ss_pred cHHHHHHHHhccc
Confidence 9999887653333
No 341
>KOG0194|consensus
Probab=95.62 E-value=0.14 Score=43.89 Aligned_cols=98 Identities=18% Similarity=0.179 Sum_probs=68.4
Q ss_pred EccceeeccCCCCCC-ce--eEEEEecC-CCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeec
Q psy16459 36 FFGKVMDKTDKPSGG-GY--QALVLSLL-GPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVME 111 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~-~~--~a~~~Ell-g~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~ 111 (143)
.||.||++.-...+. .- -|+++-.. +....+..+ -+-.|.+++.++ +-+++-.+|++.......++|||
T Consensus 169 aFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~------e~m~EArvMr~l-~H~NVVr~yGVa~~~~Pl~ivmE 241 (474)
T KOG0194|consen 169 AFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIK------EFMKEARVMRQL-NHPNVVRFYGVAVLEEPLMLVME 241 (474)
T ss_pred cccEEEEEEEEecCCceeeeeEEEeecccccccHHHHH------HHHHHHHHHHhC-CCCCEEEEEEEEcCCCccEEEEE
Confidence 499999876555443 11 26666543 111121111 244589999884 44689999999999999999999
Q ss_pred ccCc-CHHHHHHhcCCCCCHHHHHHHHHHH
Q psy16459 112 LLGP-SLEDLFDLCNRKFTLKTVLMIAIQL 140 (143)
Q Consensus 112 LlG~-sL~~l~~~~~~~fs~~T~~~ia~q~ 140 (143)
|+-- +|.+..+..++..+...-++++++.
T Consensus 242 l~~gGsL~~~L~k~~~~v~~~ek~~~~~~A 271 (474)
T KOG0194|consen 242 LCNGGSLDDYLKKNKKSLPTLEKLRFCYDA 271 (474)
T ss_pred ecCCCcHHHHHHhCCCCCCHHHHHHHHHHH
Confidence 9764 9999888876678888777777764
No 342
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=95.57 E-value=0.22 Score=37.78 Aligned_cols=99 Identities=6% Similarity=0.045 Sum_probs=62.3
Q ss_pred EccceeeccCCCCCCc-eeEEEEecCCC-CHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeec------CCeeE
Q psy16459 36 FFGKVMDKTDKPSGGG-YQALVLSLLGP-SLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPC------GKYNA 107 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~-~~a~~~Ellg~-sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~------~~~~~ 107 (143)
.||.||++.+..++.. ..|+|...... +-.+ ......|..++..+ ..+++.++++...+ ....+
T Consensus 11 ~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~-------~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~~ 82 (272)
T cd05075 11 EFGSVMEGQLNQDDSILKVAVKTMKIAICTRSE-------MEDFLSEAVCMKEF-DHPNVMRLIGVCLQTVESEGYPSPV 82 (272)
T ss_pred cCceEEEeEEccCCCeeeEEEEecccCcCCHHH-------HHHHHHHHHHHHhC-CCCCcceEEEEEccCCcccCCCCcE
Confidence 3899999988777663 23665542211 1111 12345577777666 45688888876432 23568
Q ss_pred EeecccC-cCHHHHHHh--c---CCCCCHHHHHHHHHHHhc
Q psy16459 108 LVMELLG-PSLEDLFDL--C---NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 108 iVM~LlG-~sL~~l~~~--~---~~~fs~~T~~~ia~q~l~ 142 (143)
+||+.+. .+|.+.... . ...++..++..++.|+++
T Consensus 83 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 123 (272)
T cd05075 83 VILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIAS 123 (272)
T ss_pred EEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHH
Confidence 8888874 688765422 1 345889999999988764
No 343
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=95.49 E-value=0.14 Score=39.23 Aligned_cols=98 Identities=14% Similarity=0.108 Sum_probs=64.8
Q ss_pred ccceeeccCCCCC----CceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecc
Q psy16459 37 FGKVMDKTDKPSG----GGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMEL 112 (143)
Q Consensus 37 fG~vy~v~d~~~~----~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~L 112 (143)
||.||++.+.++. ....|+|.-....+ ... ...+..|..++.++ ..+++.++++........+++++.
T Consensus 18 ~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~------~~~~~~e~~~~~~l-~h~~iv~~~~~~~~~~~~~~~~e~ 89 (283)
T cd05091 18 FGKVYKGHLFGTAPGEQTQAVAIKTLKDKAE-GPL------REEFKHEAMMRSRL-QHPNIVCLLGVVTKEQPLSMIFSY 89 (283)
T ss_pred CCeEEEEEEecCCCCCceeEEEEEEccCCCC-HHH------HHHHHHHHHHHhcC-CCCCcCeEEEEEcCCCceEEEEEc
Confidence 8999999876542 22337777532111 111 11245566666655 356899999999888889999998
Q ss_pred cC-cCHHHHHHhc---------------CCCCCHHHHHHHHHHHhc
Q psy16459 113 LG-PSLEDLFDLC---------------NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 113 lG-~sL~~l~~~~---------------~~~fs~~T~~~ia~q~l~ 142 (143)
.. .+|.++.... ...++..++..++.|+++
T Consensus 90 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~ 135 (283)
T cd05091 90 CSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAA 135 (283)
T ss_pred CCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHH
Confidence 74 6788775321 235888889999888764
No 344
>KOG0197|consensus
Probab=95.41 E-value=0.092 Score=44.73 Aligned_cols=92 Identities=21% Similarity=0.144 Sum_probs=68.7
Q ss_pred ccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccCc-
Q psy16459 37 FGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLGP- 115 (143)
Q Consensus 37 fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG~- 115 (143)
||.|+...-.++.+ .|+++=..| ++. . -....|+.++.++... .+-++++....+..-|||||++-.
T Consensus 219 FG~V~~g~~~~~~~--vavk~ik~~-~m~------~--~~f~~Ea~iMk~L~H~-~lV~l~gV~~~~~piyIVtE~m~~G 286 (468)
T KOG0197|consen 219 FGEVWLGKWNGSTK--VAVKTIKEG-SMS------P--EAFLREAQIMKKLRHE-KLVKLYGVCTKQEPIYIVTEYMPKG 286 (468)
T ss_pred cceEEEEEEcCCCc--ccceEEecc-ccC------h--hHHHHHHHHHHhCccc-CeEEEEEEEecCCceEEEEEecccC
Confidence 89998887666544 255554332 111 1 1123689999988764 678999999998899999999987
Q ss_pred CHHHHHHhc-CCCCCHHHHHHHHHHH
Q psy16459 116 SLEDLFDLC-NRKFTLKTVLMIAIQL 140 (143)
Q Consensus 116 sL~~l~~~~-~~~fs~~T~~~ia~q~ 140 (143)
||-+..+.- ++.+++...+.+|.|+
T Consensus 287 sLl~yLr~~~~~~l~~~~Ll~~a~qI 312 (468)
T KOG0197|consen 287 SLLDYLRTREGGLLNLPQLLDFAAQI 312 (468)
T ss_pred cHHHHhhhcCCCccchHHHHHHHHHH
Confidence 799887765 8899999999999986
No 345
>KOG0659|consensus
Probab=95.25 E-value=0.057 Score=43.18 Aligned_cols=99 Identities=18% Similarity=0.170 Sum_probs=76.5
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccCc
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLGP 115 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG~ 115 (143)
.||.||++.|..|++....-|+-+ |. ...+-..+.-.|++.+.++. .+++-.+++.-.+...--+|.|.+--
T Consensus 14 ~~gvVyka~d~~t~~~VAIKKIkl-~~------~kdGi~~talREIK~Lqel~-h~nIi~LiD~F~~~~~l~lVfEfm~t 85 (318)
T KOG0659|consen 14 TYGVVYKARDTETGKRVAIKKIKL-GN------AKDGINRTALREIKLLQELK-HPNIIELIDVFPHKSNLSLVFEFMPT 85 (318)
T ss_pred ceEEEEEEEecCCCcEEEEEEeec-cc------cccCccHHHHHHHHHHHHcc-CcchhhhhhhccCCCceEEEEEeccc
Confidence 399999999999999984444543 31 11233456777999988887 55788888888788888899999999
Q ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 116 SLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 116 sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+|+.+.+....-+|..-+-..+.++|+
T Consensus 86 dLe~vIkd~~i~l~pa~iK~y~~m~Lk 112 (318)
T KOG0659|consen 86 DLEVVIKDKNIILSPADIKSYMLMTLK 112 (318)
T ss_pred cHHHHhcccccccCHHHHHHHHHHHHH
Confidence 999998877778888888777777653
No 346
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=95.16 E-value=0.4 Score=36.05 Aligned_cols=99 Identities=15% Similarity=0.096 Sum_probs=60.8
Q ss_pred EccceeeccCCCCCC--ceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeee-cCCeeEEeecc
Q psy16459 36 FFGKVMDKTDKPSGG--GYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGP-CGKYNALVMEL 112 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~--~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~-~~~~~~iVM~L 112 (143)
+||.||++.+...++ ...++|.-....+..+. .....|..++..+ ..+++.++++... .+...++||+.
T Consensus 7 ~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~-------~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~lv~e~ 78 (262)
T cd05058 7 HFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEV-------EQFLKEGIIMKDF-SHPNVLSLLGICLPSEGSPLVVLPY 78 (262)
T ss_pred CCceEEEEEEecCCCceEEEEEEecCccCCHHHH-------HHHHHHHHHHccC-CCCCcceEEEEeecCCCCcEEEEec
Confidence 489999887654332 23466653221121111 1234466665554 4567778877554 45678899987
Q ss_pred cC-cCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 113 LG-PSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 113 lG-~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.- .+|.++.+......+...++.++.|+++
T Consensus 79 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~ 109 (262)
T cd05058 79 MKHGDLRNFIRSETHNPTVKDLIGFGLQVAK 109 (262)
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 64 5888876654556777888888888754
No 347
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=94.96 E-value=0.19 Score=33.89 Aligned_cols=69 Identities=20% Similarity=0.232 Sum_probs=48.8
Q ss_pred ccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcC-CcccEEEEeeecCCeeEEeecccC-
Q psy16459 37 FGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSN-KGIPEVYYFGPCGKYNALVMELLG- 114 (143)
Q Consensus 37 fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~-~~~P~l~~~G~~~~~~~iVM~LlG- 114 (143)
+|.||++.+.+ ..+ ++|.-..... ......|..++..+... ..+|+++.....+...|++|+.+.
T Consensus 11 ~~~v~~~~~~~--~~~-~iK~~~~~~~----------~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g 77 (155)
T cd05120 11 TNRVYLLGTKD--EDY-VLKINPSREK----------GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEG 77 (155)
T ss_pred ccceEEEEecC--CeE-EEEecCCCCc----------hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCC
Confidence 78899888754 344 6766421111 12467788888888765 689999999888889999999875
Q ss_pred cCHH
Q psy16459 115 PSLE 118 (143)
Q Consensus 115 ~sL~ 118 (143)
.++.
T Consensus 78 ~~~~ 81 (155)
T cd05120 78 ETLD 81 (155)
T ss_pred eecc
Confidence 4444
No 348
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=94.79 E-value=0.44 Score=36.07 Aligned_cols=98 Identities=9% Similarity=0.089 Sum_probs=58.1
Q ss_pred ccceeeccCCCC---CCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCC------eeE
Q psy16459 37 FGKVMDKTDKPS---GGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGK------YNA 107 (143)
Q Consensus 37 fG~vy~v~d~~~---~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~------~~~ 107 (143)
||.||+|.+..+ +..+ |+|.-.....-.... -....|+.++.++. .+++.++++.+.... ..+
T Consensus 12 ~g~v~~~~~~~~~~~~~~~-aiK~~~~~~~~~~~~------~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~~~~~~ 83 (273)
T cd05074 12 FGSVREAQLKSEDGSFQKV-AVKMLKADIFSSSDI------EEFLREAACMKEFD-HPNVIKLIGVSLRSRAKGRLPIPM 83 (273)
T ss_pred CCCEEeeEeeccCCCceEE-EEEEeccccCChHHH------HHHHHHHHHHhcCC-CCCcceEEEEEccCCCCCcccceE
Confidence 899999976543 3444 776543211111100 11345777777664 578999999875432 235
Q ss_pred Eeeccc-CcCHHHHHHhc-----CCCCCHHHHHHHHHHHhc
Q psy16459 108 LVMELL-GPSLEDLFDLC-----NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 108 iVM~Ll-G~sL~~l~~~~-----~~~fs~~T~~~ia~q~l~ 142 (143)
++++.. +.+|.++.... ...++..++..++.|++.
T Consensus 84 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~ 124 (273)
T cd05074 84 VILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIAS 124 (273)
T ss_pred EEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Confidence 666644 46887654321 125788888999988753
No 349
>PRK14879 serine/threonine protein kinase; Provisional
Probab=94.74 E-value=0.16 Score=37.45 Aligned_cols=83 Identities=18% Similarity=0.163 Sum_probs=47.5
Q ss_pred EccceeeccCCCCCCceeEEEEecCCC-CHHHHHHHhCCCcchHHHHHHHHhhhcC-CcccEEEEeeecCCeeEEeeccc
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGP-SLQDLFELCGFRFSLKTVLMIAQQLQSN-KGIPEVYYFGPCGKYNALVMELL 113 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~-sl~~l~~~~~~~~sL~tE~~v~~ql~~~-~~~P~l~~~G~~~~~~~iVM~Ll 113 (143)
.+|.||++.+ ++..+ ++|.-.... ....+.... .......|..++.++... ...|..+... ....++||+.+
T Consensus 8 ~~~~vy~~~~--~~~~~-~vK~~~~~~~~~~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~p~~~~~~--~~~~~lv~e~~ 81 (211)
T PRK14879 8 AEAEIYLGDF--LGIKA-VIKWRIPKRYRHPELDERI-RRERTRREARIMSRARKAGVNVPAVYFVD--PENFIIVMEYI 81 (211)
T ss_pred ceEEEEEEee--CCCce-EEEEeCCcCCcChHHHHHH-HHHHHHHHHHHHHHHHHCCCCCCeEEEEe--CCCCEEEEEEe
Confidence 3889999876 34445 666532110 111111000 012356677787777542 3456665543 45678999988
Q ss_pred -CcCHHHHHHhc
Q psy16459 114 -GPSLEDLFDLC 124 (143)
Q Consensus 114 -G~sL~~l~~~~ 124 (143)
|.+|.++....
T Consensus 82 ~G~~L~~~~~~~ 93 (211)
T PRK14879 82 EGEPLKDLINSN 93 (211)
T ss_pred CCcCHHHHHHhc
Confidence 88999886543
No 350
>KOG0662|consensus
Probab=94.72 E-value=0.12 Score=39.60 Aligned_cols=99 Identities=20% Similarity=0.175 Sum_probs=79.6
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccCc
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLGP 115 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG~ 115 (143)
-||.||++++.++++-. |+|--.+..+ ..+-..|--.|+.+++++... .+.++++.=..++---+|.+.+.+
T Consensus 14 tygtvfkarn~~t~eiv-alkrvrlddd------degvpssalreicllkelkhk-nivrl~dvlhsdkkltlvfe~cdq 85 (292)
T KOG0662|consen 14 TYGTVFKARNRETHEIV-ALKRVRLDDD------DEGVPSSALREICLLKELKHK-NIVRLHDVLHSDKKLTLVFEFCDQ 85 (292)
T ss_pred cceeeEecccCCccceE-EEEEEeccCC------CCCCcHHHHHHHHHHHHhhhc-ceeehhhhhccCceeEEeHHHhhH
Confidence 39999999999999987 7776544321 113345666788888887654 677888888888888999999999
Q ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 116 SLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 116 sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+|.+.+.++++.....++-.+..|.|.
T Consensus 86 dlkkyfdslng~~d~~~~rsfmlqllr 112 (292)
T KOG0662|consen 86 DLKKYFDSLNGDLDPEIVRSFMLQLLR 112 (292)
T ss_pred HHHHHHHhcCCcCCHHHHHHHHHHHHh
Confidence 999999999999999999999999764
No 351
>KOG4236|consensus
Probab=94.61 E-value=0.19 Score=43.97 Aligned_cols=99 Identities=17% Similarity=0.153 Sum_probs=70.2
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccCc
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLGP 115 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG~ 115 (143)
-||.||-+....|+.+...-+++-+ +--.++...|..|+.++.++.. +|+-.+-..-.....-|.|||-|--
T Consensus 576 QFG~VYgg~hRktGrdVAvKvIdKl-------rFp~kqesqlR~EVaILq~l~H-PGiV~le~M~ET~ervFVVMEKl~G 647 (888)
T KOG4236|consen 576 QFGTVYGGKHRKTGRDVAVKVIDKL-------RFPTKQESQLRNEVAILQNLHH-PGIVNLECMFETPERVFVVMEKLHG 647 (888)
T ss_pred cceeeecceecccCceeeeeeeecc-------cCCCchHHHHHHHHHHHHhcCC-CCeeEEEEeecCCceEEEEehhhcc
Confidence 3999999999999999944455532 1112345678999999877643 5777777777778889999997765
Q ss_pred CHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 116 SLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 116 sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
++-+..-+. .++++-.++--+.-|+|.
T Consensus 648 DMLEMILSsEkgRL~er~TkFlvtQIL~ 675 (888)
T KOG4236|consen 648 DMLEMILSSEKGRLPERITKFLVTQILV 675 (888)
T ss_pred hHHHHHHHhhcccchHHHHHHHHHHHHH
Confidence 555444444 677887777777777663
No 352
>KOG0192|consensus
Probab=94.58 E-value=0.3 Score=40.29 Aligned_cols=97 Identities=23% Similarity=0.218 Sum_probs=65.7
Q ss_pred EEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCC-eeEEeeccc
Q psy16459 35 YFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGK-YNALVMELL 113 (143)
Q Consensus 35 ~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~-~~~iVM~Ll 113 (143)
.+||.||++.-.++.. .|+|.=.- ....+.. ...+..|+.++..+.. +.+-+++++-..+. ...+|||++
T Consensus 52 G~~g~V~~~~~~g~~~--vavK~~~~-~~~~~~~-----~~~f~~E~~il~~l~H-pNIV~f~G~~~~~~~~~~iVtEy~ 122 (362)
T KOG0192|consen 52 GSFGTVYKGKWRGTDV--VAVKIISD-PDFDDES-----RKAFRREASLLSRLRH-PNIVQFYGACTSPPGSLCIVTEYM 122 (362)
T ss_pred CCceeEEEEEeCCcee--EEEEEecc-hhcChHH-----HHHHHHHHHHHHhCCC-CCeeeEEEEEcCCCCceEEEEEeC
Confidence 3589999877544443 24443211 1111110 2357788888887543 45666777766666 678999998
Q ss_pred C-cCHHHHHHhc-CCCCCHHHHHHHHHHH
Q psy16459 114 G-PSLEDLFDLC-NRKFTLKTVLMIAIQL 140 (143)
Q Consensus 114 G-~sL~~l~~~~-~~~fs~~T~~~ia~q~ 140 (143)
. -+|.++.... .+.+++..++++|.|+
T Consensus 123 ~~GsL~~~l~~~~~~~l~~~~~l~~aldi 151 (362)
T KOG0192|consen 123 PGGSLSVLLHKKRKRKLPLKVRLRIALDI 151 (362)
T ss_pred CCCcHHHHHhhcccCCCCHHHHHHHHHHH
Confidence 7 5999998774 7899999999999986
No 353
>KOG0201|consensus
Probab=94.14 E-value=0.022 Score=48.00 Aligned_cols=80 Identities=21% Similarity=0.195 Sum_probs=58.4
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccC-
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLG- 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG- 114 (143)
+||.||++.|..+++.+..-++.+.. +-.+ ---+..|+.++.++.. ++|.++|+.=-++..-+++|+.+|
T Consensus 25 sfG~Vyk~~d~~t~k~vAiKii~Le~-~~de-------Iediqqei~~Ls~~~~-~~it~yygsyl~g~~LwiiMey~~g 95 (467)
T KOG0201|consen 25 SFGEVYKAIDNKTKKVVAIKIIDLEE-AEDE-------IEDIQQEISVLSQCDS-PNITEYYGSYLKGTKLWIIMEYCGG 95 (467)
T ss_pred ccceeeeeeeccccceEEEEEechhh-cchh-------hHHHHHHHHHHHhcCc-chHHhhhhheeecccHHHHHHHhcC
Confidence 59999999999999999444444321 1111 1235568888877755 578888888888999999999987
Q ss_pred cCHHHHHHhc
Q psy16459 115 PSLEDLFDLC 124 (143)
Q Consensus 115 ~sL~~l~~~~ 124 (143)
-++.++.+..
T Consensus 96 Gsv~~lL~~~ 105 (467)
T KOG0201|consen 96 GSVLDLLKSG 105 (467)
T ss_pred cchhhhhccC
Confidence 5888887764
No 354
>KOG0612|consensus
Probab=93.78 E-value=0.02 Score=53.25 Aligned_cols=93 Identities=19% Similarity=0.220 Sum_probs=63.5
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhC-CCcchHHHHHHHHhhhcCCccc
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCG-FRFSLKTVLMIAQQLQSNKGIP 94 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~-~~~sL~tE~~v~~ql~~~~~~P 94 (143)
-|+|+|.++.+ +||.|..|..+.|++-| |||+= +-++..+... ..|.-+..+++. ..++=+.
T Consensus 76 DfeilKvIGrG---------aFGEV~lVr~k~t~~VY-AMK~l----nK~eMlKr~~tA~F~EERDimv~---~ns~Wiv 138 (1317)
T KOG0612|consen 76 DFEILKVIGRG---------AFGEVALVRHKSTEKVY-AMKIL----NKWEMLKRAETACFREERDIMVF---GNSEWIV 138 (1317)
T ss_pred hhHHHHHhccc---------ccceeEEEEeeccccch-hHHHh----hHHHHhhchhHHHHHHHhHHHHc---CCcHHHH
Confidence 47888888664 49999999999999988 98762 2223222221 123233333332 2255677
Q ss_pred EEEEeeecCCeeEEeecc-cCcCHHHHHHhcC
Q psy16459 95 EVYYFGPCGKYNALVMEL-LGPSLEDLFDLCN 125 (143)
Q Consensus 95 ~l~~~G~~~~~~~iVM~L-lG~sL~~l~~~~~ 125 (143)
++++.-++++|-|+|||. .|-+|-.|....+
T Consensus 139 ~LhyAFQD~~~LYlVMdY~pGGDlltLlSk~~ 170 (1317)
T KOG0612|consen 139 QLHYAFQDERYLYLVMDYMPGGDLLTLLSKFD 170 (1317)
T ss_pred HHHHHhcCccceEEEEecccCchHHHHHhhcC
Confidence 888888999999999996 5778888877654
No 355
>KOG0193|consensus
Probab=93.29 E-value=0.42 Score=42.09 Aligned_cols=92 Identities=21% Similarity=0.305 Sum_probs=62.7
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeee--cCCeeEEeeccc
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGP--CGKYNALVMELL 113 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~--~~~~~~iVM~Ll 113 (143)
.||.||++.. +++.+.-+.+..+++-+.+. ..+.|+.++++-. |.=-+...|. .+.+ .||-+.+
T Consensus 404 sFGtV~Rg~w---hGdVAVK~Lnv~~pt~~qlq-------aFKnEVa~lkkTR---H~NIlLFMG~~~~p~~-AIiTqwC 469 (678)
T KOG0193|consen 404 SFGTVYRGRW---HGDVAVKLLNVDDPTPEQLQ-------AFKNEVAVLKKTR---HENILLFMGACMNPPL-AIITQWC 469 (678)
T ss_pred cccceeeccc---ccceEEEEEecCCCCHHHHH-------HHHHHHHHHhhcc---hhhheeeehhhcCCce-eeeehhc
Confidence 3999999887 66775556666677766443 3578999987654 3334444444 4555 4444444
Q ss_pred -CcCHHHHHHhcCCCCCHHHHHHHHHHHh
Q psy16459 114 -GPSLEDLFDLCNRKFTLKTVLMIAIQLE 141 (143)
Q Consensus 114 -G~sL~~l~~~~~~~fs~~T~~~ia~q~l 141 (143)
|.+|.........+|-+.++..||.|+.
T Consensus 470 eGsSLY~hlHv~etkfdm~~~idIAqQia 498 (678)
T KOG0193|consen 470 EGSSLYTHLHVQETKFDMNTTIDIAQQIA 498 (678)
T ss_pred cCchhhhhccchhhhhhHHHHHHHHHHHH
Confidence 5788876655578999999999999974
No 356
>KOG1035|consensus
Probab=92.29 E-value=0.051 Score=50.86 Aligned_cols=89 Identities=16% Similarity=0.143 Sum_probs=61.4
Q ss_pred ccceeeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhh
Q psy16459 9 SMSLLKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQ 88 (143)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~ 88 (143)
+.|....+|+.++.++.+| ||.||+|+++-|+..|+.-|+-+-+ +-... ..+..|++++..+.
T Consensus 473 ~~SRY~~DFEEL~lLGkGG---------FG~VvkVRNKlDGr~YAIKKIpl~~-s~~~~-------skI~rEVk~LArLn 535 (1351)
T KOG1035|consen 473 QFSRYLNDFEELELLGKGG---------FGSVVKVRNKLDGREYAIKKIPLKA-SDKLY-------SKILREVKLLARLN 535 (1351)
T ss_pred chhhHhhhhHHHHHhcCCC---------CceEEEEeecccchhhhhhhccCch-HHHHH-------HHHHHHHHHHhhcC
Confidence 3466777999999998877 9999999999999999544565433 22222 12566999988886
Q ss_pred cCCcccEEEEeeecCCeeEEeecccCc
Q psy16459 89 SNKGIPEVYYFGPCGKYNALVMELLGP 115 (143)
Q Consensus 89 ~~~~~P~l~~~G~~~~~~~iVM~LlG~ 115 (143)
.. ++-++|..=....-..-+++.++.
T Consensus 536 Hp-NVVRYysAWVEs~~~~~~~ei~~~ 561 (1351)
T KOG1035|consen 536 HP-NVVRYYSAWVESTAELTVLEIVAS 561 (1351)
T ss_pred Cc-ceeeeehhhhccCCcccccccccc
Confidence 63 455555555555566666666653
No 357
>PRK10345 hypothetical protein; Provisional
Probab=92.18 E-value=1.8 Score=32.90 Aligned_cols=81 Identities=12% Similarity=0.115 Sum_probs=54.0
Q ss_pred ccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhc----CCcccEEEEeeecCC---eeE-E
Q psy16459 37 FGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQS----NKGIPEVYYFGPCGK---YNA-L 108 (143)
Q Consensus 37 fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~----~~~~P~l~~~G~~~~---~~~-i 108 (143)
||.||. ++.+... ++|.-..+..- ..-....|+.++.++.. -+++++++++-.++. +-| +
T Consensus 15 ~~~Vy~--hp~~~~k--~IKv~~~~~~~--------~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~ 82 (210)
T PRK10345 15 HRKCYA--HPEDAQR--CIKIVYHRGDG--------GDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV 82 (210)
T ss_pred ceEEEE--CCCCcCe--EEEEEeccccc--------hHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence 888995 6665543 56665432211 12246889999998853 468999999887763 434 7
Q ss_pred eecccC---cCHHHHHHhcCCCCCHH
Q psy16459 109 VMELLG---PSLEDLFDLCNRKFTLK 131 (143)
Q Consensus 109 VM~LlG---~sL~~l~~~~~~~fs~~ 131 (143)
|||..| ++|.++.+. +.|+..
T Consensus 83 I~e~~G~~~~tL~~~l~~--~~~~e~ 106 (210)
T PRK10345 83 IADFDGKPSITLTEFAEQ--CRYEED 106 (210)
T ss_pred EecCCCCcchhHHHHHHc--ccccHh
Confidence 899877 799988754 345544
No 358
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=91.91 E-value=0.47 Score=34.62 Aligned_cols=79 Identities=15% Similarity=0.134 Sum_probs=47.6
Q ss_pred EccceeeccCCCCCCceeEEEEecCCC----CHHHHHHHhCCCcchHHHHHHHHhhhcC-CcccEEEEeeecCCeeEEee
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGP----SLQDLFELCGFRFSLKTVLMIAQQLQSN-KGIPEVYYFGPCGKYNALVM 110 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~----sl~~l~~~~~~~~sL~tE~~v~~ql~~~-~~~P~l~~~G~~~~~~~iVM 110 (143)
.||.||++.. ++... ++|.-.... .++.... ...+..|..++..+... ..+|..+.. .+...++||
T Consensus 6 ~~~~vy~~~~--~~~~~-viK~~~~~~~~~~~~~~~~~----~~~~~~E~~~l~~l~~~~i~~p~~~~~--~~~~~~lv~ 76 (199)
T TIGR03724 6 AEAIIYLGDF--LGLKA-VIKERVPKSYRHPELDERIR----RERTRNEARLLSRARKAGVNTPVVYDV--DPDNKTIVM 76 (199)
T ss_pred ceEEEEEeec--CCccE-EEEEecCCcCcCchHHHHHH----HHHHHHHHHHHHHHHHCCCCCCEEEEE--ECCCCEEEE
Confidence 3899999974 33444 666632211 1111111 12356788888877653 356777665 444578999
Q ss_pred ccc-CcCHHHHHHh
Q psy16459 111 ELL-GPSLEDLFDL 123 (143)
Q Consensus 111 ~Ll-G~sL~~l~~~ 123 (143)
|.+ |.+|.++...
T Consensus 77 e~~~g~~l~~~~~~ 90 (199)
T TIGR03724 77 EYIEGKPLKDVIEE 90 (199)
T ss_pred EEECCccHHHHHhh
Confidence 998 7899887543
No 359
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=91.71 E-value=1.5 Score=38.25 Aligned_cols=33 Identities=24% Similarity=0.265 Sum_probs=26.3
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCC----CCceeEEEE
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPS----GGGYQALVL 57 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~----~~~~~a~~~ 57 (143)
.+|++.+.++.++ ||.||++.+..+ +..+ |+|.
T Consensus 132 ~~y~l~~~LG~G~---------FG~VYka~~~~~~~~~~~~v-AvK~ 168 (566)
T PLN03225 132 DDFVLGKKLGEGA---------FGVVYKASLVNKQSKKEGKY-VLKK 168 (566)
T ss_pred CCeEEeEEEeeCC---------CeEEEEEEEcCCccccCcEE-EEEE
Confidence 4678888886655 999999999988 7777 7764
No 360
>PRK12274 serine/threonine protein kinase; Provisional
Probab=91.25 E-value=1.1 Score=34.68 Aligned_cols=74 Identities=12% Similarity=0.104 Sum_probs=48.3
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecc-cC
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMEL-LG 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~L-lG 114 (143)
.||.||.+.+ ++..++..++-+.+... +.... .-...|+.++.++.+.+++|+++++ ...|++|+. -|
T Consensus 14 ~f~~v~~~~~----~~~k~~~~~l~~~~~~~-~~~~~--~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI~G 82 (218)
T PRK12274 14 TFGRILLVRG----GERKFVRRDLSAAPWWL-RGVAW--WLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYLAG 82 (218)
T ss_pred CcceEEEeec----CCceeeecccccchhhh-hhHHH--HHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeeecC
Confidence 3899997765 23335656654433321 10000 1246799999999888899999986 236999998 57
Q ss_pred cCHHHH
Q psy16459 115 PSLEDL 120 (143)
Q Consensus 115 ~sL~~l 120 (143)
.+|.+.
T Consensus 83 ~~L~~~ 88 (218)
T PRK12274 83 AAMYQR 88 (218)
T ss_pred ccHHhh
Confidence 888653
No 361
>KOG0585|consensus
Probab=90.67 E-value=0.95 Score=39.02 Aligned_cols=105 Identities=14% Similarity=0.081 Sum_probs=66.7
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHh--CCCc--------chHHHHHHH
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELC--GFRF--------SLKTVLMIA 84 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~--~~~~--------sL~tE~~v~ 84 (143)
.+|++.+.++.+ .||+|-++.|..+++.| |||+=. -..+.+.. .... -...|+.++
T Consensus 97 Nqy~l~~eiG~G---------~yGkVkLar~~~~~~l~-AiKil~----K~~~~~~~~~~~~~a~~~~~~ekv~~EIail 162 (576)
T KOG0585|consen 97 NQYELIKEIGSG---------QYGKVKLARDEVDGKLY-AIKILP----KKELRRQYGFPRQPAMKLMPIEKVRREIAIL 162 (576)
T ss_pred hheehhhhhcCC---------ccceEEEEeecCCCcEE-EEEeec----hhhhhhhcccccccccccCcHHHHHHHHHHH
Confidence 378888877553 39999999999999988 887631 11111111 1111 245788888
Q ss_pred HhhhcCCcccEEEEeeec--CCeeEEeecccCcCHHHHHHhc-CCC-CCHHHHHHH
Q psy16459 85 QQLQSNKGIPEVYYFGPC--GKYNALVMELLGPSLEDLFDLC-NRK-FTLKTVLMI 136 (143)
Q Consensus 85 ~ql~~~~~~P~l~~~G~~--~~~~~iVM~LlG~sL~~l~~~~-~~~-fs~~T~~~i 136 (143)
+++.. +++-+++..=-+ .+.-|||.|++. .+.+...- .+- ++-.++-.+
T Consensus 163 Kkl~H-~nVV~LiEvLDDP~s~~~YlVley~s--~G~v~w~p~d~~els~~~Ar~y 215 (576)
T KOG0585|consen 163 KKLHH-PNVVKLIEVLDDPESDKLYLVLEYCS--KGEVKWCPPDKPELSEQQARKY 215 (576)
T ss_pred HhcCC-cCeeEEEEeecCcccCceEEEEEecc--CCccccCCCCcccccHHHHHHH
Confidence 88776 788888888655 368899999986 34433222 333 555555443
No 362
>KOG0593|consensus
Probab=90.31 E-value=0.57 Score=38.39 Aligned_cols=109 Identities=14% Similarity=0.061 Sum_probs=74.1
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEE
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEV 96 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l 96 (143)
++.|.+++- | +||.||+-++++|++-. |+|-=...++=..+.+. --.|+++++|+... ..-.+
T Consensus 4 YE~LgkvGE-G--------SYGvV~KCrnk~TgqIV-AIKkF~Esedd~~VkKI------AlREIrmLKqLkH~-NLVnL 66 (396)
T KOG0593|consen 4 YEKLGKVGE-G--------SYGVVMKCRNKDTGQIV-AIKKFVESEDDPVVKKI------ALREIRMLKQLKHE-NLVNL 66 (396)
T ss_pred Hhhhhcccc-C--------cceEEEEeccCCcccEE-EEEeeccCCccHHHHHH------HHHHHHHHHhcccc-hHHHH
Confidence 455666643 3 49999999999999988 77654333332222221 23478888777543 34455
Q ss_pred EEeeecCCeeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 97 YYFGPCGKYNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 97 ~~~G~~~~~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+..-+..+--++|.|.+..++-+..+.......-..+-.+.+|+|.
T Consensus 67 iEVFrrkrklhLVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ 112 (396)
T KOG0593|consen 67 IEVFRRKRKLHLVFEYCDHTVLHELERYPNGVPSELVKKYLYQLLK 112 (396)
T ss_pred HHHHHhcceeEEEeeecchHHHHHHHhccCCCCHHHHHHHHHHHHH
Confidence 5556677788999999999888777777666677777777788764
No 363
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=90.18 E-value=2.1 Score=30.76 Aligned_cols=74 Identities=19% Similarity=0.147 Sum_probs=41.2
Q ss_pred EccceeeccCCCCCCceeEEEEecCCC-CHHHHHHH-----h--CC--------CcchHHHHHHHHhhhcC-CcccEEEE
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGP-SLQDLFEL-----C--GF--------RFSLKTVLMIAQQLQSN-KGIPEVYY 98 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~-sl~~l~~~-----~--~~--------~~sL~tE~~v~~ql~~~-~~~P~l~~ 98 (143)
+||.||.+.+. ++..+ ++|.-.... +....... . .. ......|...+.++... ..+|+.+.
T Consensus 9 ~~g~Vy~a~~~-~~~~v-avKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~ 86 (187)
T cd05119 9 KEADVYLALDG-DGEPV-AVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPVPKPID 86 (187)
T ss_pred cceeEEEEECC-CCCEE-EEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCCCceEe
Confidence 49999999987 56666 887643211 11110000 0 00 11124455555555443 35777776
Q ss_pred eeecCCeeEEeecccCc
Q psy16459 99 FGPCGKYNALVMELLGP 115 (143)
Q Consensus 99 ~G~~~~~~~iVM~LlG~ 115 (143)
.+ ..++||+.++.
T Consensus 87 ~~----~~~lv~e~~~g 99 (187)
T cd05119 87 LN----RHVLVMEFIGG 99 (187)
T ss_pred cC----CCEEEEEEeCC
Confidence 63 35999999985
No 364
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=89.95 E-value=2.4 Score=36.45 Aligned_cols=46 Identities=17% Similarity=0.379 Sum_probs=33.6
Q ss_pred chHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-CcCHHHHHH
Q psy16459 76 SLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL-GPSLEDLFD 122 (143)
Q Consensus 76 sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll-G~sL~~l~~ 122 (143)
.+..|+.++.++.. +++|....+...+...++|||.+ |.+|.+...
T Consensus 382 ~~~~E~~~l~~l~~-~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~ 428 (535)
T PRK09605 382 RTRAEARLLSEARR-AGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVLE 428 (535)
T ss_pred HHHHHHHHHHhhcc-cCCCeeEEEEEeCCCCEEEEEecCCCcHHHHHH
Confidence 36678888887754 35665555555666789999998 789988764
No 365
>KOG1152|consensus
Probab=89.81 E-value=1.6 Score=38.62 Aligned_cols=103 Identities=19% Similarity=0.149 Sum_probs=70.8
Q ss_pred EEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcC--CcccEEEEeeecCCeeEEeecc
Q psy16459 35 YFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSN--KGIPEVYYFGPCGKYNALVMEL 112 (143)
Q Consensus 35 ~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~--~~~P~l~~~G~~~~~~~iVM~L 112 (143)
.+||+|..+.++.++... .+||=.--+=|.|-+-...+=-+...|+.++..+..- +.+-+++++-..+.|.|++|+-
T Consensus 572 GAyGkV~lai~K~n~~eV-ViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd~yyl~te~ 650 (772)
T KOG1152|consen 572 GAYGKVNLAIHKENNYEV-VIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDDYYYLETEV 650 (772)
T ss_pred cccceEEEeeecccceEE-EeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCCeeEEEecC
Confidence 359999999998886555 6666433333444444444455788899999888643 4788999999999999999999
Q ss_pred cCcCHHHHHHhc--CCCCCHHHHHHHHHH
Q psy16459 113 LGPSLEDLFDLC--NRKFTLKTVLMIAIQ 139 (143)
Q Consensus 113 lG~sL~~l~~~~--~~~fs~~T~~~ia~q 139 (143)
-|+. =||+..- ..+++-.-+-.|=.|
T Consensus 651 hg~g-IDLFd~IE~kp~m~E~eAk~IFkQ 678 (772)
T KOG1152|consen 651 HGEG-IDLFDFIEFKPRMDEPEAKLIFKQ 678 (772)
T ss_pred CCCC-cchhhhhhccCccchHHHHHHHHH
Confidence 9986 3444332 345555555444444
No 366
>KOG0666|consensus
Probab=89.79 E-value=0.33 Score=39.96 Aligned_cols=111 Identities=14% Similarity=0.092 Sum_probs=69.0
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCce---eEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCc
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGY---QALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKG 92 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~---~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~ 92 (143)
++++.+.++.+ -||.||++..+++++.. +|||.=-..+ ...+-..|-..|+.++.++....
T Consensus 25 ~ye~ig~Ig~G---------TYG~VykA~~~~~n~kr~k~yAiKkfk~~k------d~tGiS~SAcREiaL~REl~h~n- 88 (438)
T KOG0666|consen 25 EYEGIGKIGRG---------TYGKVYKAVRKNTNDKRTKEYAIKKFKGEK------DGTGISMSACREIALLRELKHPN- 88 (438)
T ss_pred Hhhccceeccc---------ccceeeEeeeccCCcccchhhHHHHHhccC------CCCCcCHHHHHHHHHHHHhcCCc-
Confidence 56666666443 39999999666666522 3554310000 00122345566788888776542
Q ss_pred ccEEEEee-ecCCeeEEeecccCcCHHHHHHhc----CCCCCHHHHHHHHHHHhc
Q psy16459 93 IPEVYYFG-PCGKYNALVMELLGPSLEDLFDLC----NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 93 ~P~l~~~G-~~~~~~~iVM~LlG~sL~~l~~~~----~~~fs~~T~~~ia~q~l~ 142 (143)
+-.+...- ..++--+++.|..--+|+.+.+.. .+....+++-.|..|+|+
T Consensus 89 vi~Lv~Vfl~~d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~ 143 (438)
T KOG0666|consen 89 VISLVKVFLSHDKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILD 143 (438)
T ss_pred chhHHHHHhccCceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHh
Confidence 22222222 227788999999999999986643 466888899999999874
No 367
>KOG1006|consensus
Probab=89.71 E-value=0.36 Score=38.95 Aligned_cols=80 Identities=21% Similarity=0.113 Sum_probs=59.1
Q ss_pred EEccceeeccCCCCCCceeEEE-EecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc
Q psy16459 35 YFFGKVMDKTDKPSGGGYQALV-LSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL 113 (143)
Q Consensus 35 ~~fG~vy~v~d~~~~~~~~a~~-~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll 113 (143)
.+||.|++...+.++... |+| +..-.. + +. ...+-.|+.+-.+-..++.+-++|+.--.+.-.||-|||.
T Consensus 75 G~fG~V~KM~hk~sg~~m-AVKrIr~~n~--~---ke---q~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM 145 (361)
T KOG1006|consen 75 GAFGTVNKMLHKPSGKLM-AVKRIRSNNI--E---KE---QKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM 145 (361)
T ss_pred CcchhhhhhhcCccCcEE-EEEEeeeccc--h---HH---HHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH
Confidence 359999999999999977 443 322111 0 10 1235566667667778889999998888888899999999
Q ss_pred CcCHHHHHHh
Q psy16459 114 GPSLEDLFDL 123 (143)
Q Consensus 114 G~sL~~l~~~ 123 (143)
.-||..+++.
T Consensus 146 d~SlDklYk~ 155 (361)
T KOG1006|consen 146 DISLDKLYKR 155 (361)
T ss_pred hhhHHHHHHH
Confidence 9999999875
No 368
>KOG0670|consensus
Probab=88.70 E-value=1.2 Score=39.08 Aligned_cols=111 Identities=20% Similarity=0.232 Sum_probs=80.5
Q ss_pred eeeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcC-
Q psy16459 12 LLKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSN- 90 (143)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~- 90 (143)
+|..++.|..-.+. | -|+.|..+.|...+..+ |||+=- +.+-.++ +=..|+.|+.++.+.
T Consensus 429 ~LD~RY~V~~~~Gk-G--------vFs~Vvra~D~~r~~~v-AiKIIR---nNE~M~K------tGl~EleiLkKL~~AD 489 (752)
T KOG0670|consen 429 LLDSRYEVQGYTGK-G--------VFSTVVRARDQARGQEV-AIKIIR---NNEVMHK------TGLKELEILKKLNDAD 489 (752)
T ss_pred hhcceeEEEecccc-c--------eeeeeeeccccCCCCee-EEEEee---cchHHhh------hhhHHHHHHHHhhccC
Confidence 45556677655533 2 38899999999999987 887731 1122222 124589999999875
Q ss_pred ----CcccEEEEeeecCCeeEEeecccCcCHHHHHHhcCC--CCCHHHHHHHHHHHh
Q psy16459 91 ----KGIPEVYYFGPCGKYNALVMELLGPSLEDLFDLCNR--KFTLKTVLMIAIQLE 141 (143)
Q Consensus 91 ----~~~P~l~~~G~~~~~~~iVM~LlG~sL~~l~~~~~~--~fs~~T~~~ia~q~l 141 (143)
.|+-+++..-...++-+||.|.|--||.++.+..|+ .+.++.|-..|.|++
T Consensus 490 ~Edk~Hclrl~r~F~hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLf 546 (752)
T KOG0670|consen 490 PEDKFHCLRLFRHFKHKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLF 546 (752)
T ss_pred chhhhHHHHHHHHhhhcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHH
Confidence 377777777778889999999999999999998855 477777777777753
No 369
>KOG0660|consensus
Probab=88.00 E-value=1.9 Score=35.60 Aligned_cols=100 Identities=15% Similarity=0.139 Sum_probs=63.2
Q ss_pred EEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcc--cEEEEeeecC--CeeEEee
Q psy16459 35 YFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGI--PEVYYFGPCG--KYNALVM 110 (143)
Q Consensus 35 ~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~--P~l~~~G~~~--~~~~iVM 110 (143)
.+||.|-++.|+.|++....-|+. ..+++.. ....--.|++++..+....-+ -.++.....+ +--|+|+
T Consensus 33 GAyGvVcsA~~~~t~~~VAIKKi~---~~F~~~~----~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~ 105 (359)
T KOG0660|consen 33 GAYGVVCSAKDKRTGEKVAIKKIL---NPFENQI----DAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVF 105 (359)
T ss_pred cceeeEEEEEEcCCCCEeehhhhh---hhhhchH----HHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEeh
Confidence 358889999999999877333443 0111100 011134578888887643222 2222222223 4569999
Q ss_pred cccCcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 111 ELLGPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 111 ~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+|++-+|+.+.+. ++.++-.-+..+.+|+|.
T Consensus 106 elMetDL~~iik~-~~~L~d~H~q~f~YQiLr 136 (359)
T KOG0660|consen 106 ELMETDLHQIIKS-QQDLTDDHAQYFLYQILR 136 (359)
T ss_pred hHHhhHHHHHHHc-CccccHHHHHHHHHHHHH
Confidence 9999999998775 355888889999999874
No 370
>KOG0596|consensus
Probab=87.92 E-value=0.68 Score=40.60 Aligned_cols=48 Identities=13% Similarity=0.161 Sum_probs=39.8
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHh
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELC 71 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~ 71 (143)
-+.|+..|.++ +|...+-++++|-- ++.|-+|+||-..-+|..+.+..
T Consensus 406 y~nEI~lL~KL--kg~~~IIqL~DYEv---------~d~~lYmvmE~Gd~DL~kiL~k~ 453 (677)
T KOG0596|consen 406 YRNEIALLNKL--KGHDKIIQLYDYEV---------TDGYLYMVMECGDIDLNKILKKK 453 (677)
T ss_pred HHHHHHHHHHh--cCCceEEEEeeeec---------cCceEEEEeecccccHHHHHHhc
Confidence 45799999999 77788999998865 67788999999999999887654
No 371
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=87.39 E-value=5.4 Score=30.15 Aligned_cols=69 Identities=20% Similarity=0.226 Sum_probs=48.7
Q ss_pred cceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-CcC
Q psy16459 38 GKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL-GPS 116 (143)
Q Consensus 38 G~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll-G~s 116 (143)
..||++...+ +.+ ++|.-.-. . ...+..|+.++..+....-+|+++.++..+...++||+.+ |.+
T Consensus 13 ~~v~~~~~~~--~~~-~vk~~~~~---~--------~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~ 78 (244)
T cd05150 13 ATVYRLDGKN--PGL-YLKIAPSG---P--------TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVP 78 (244)
T ss_pred CeEEEEcCCC--CcE-EEEecCCC---c--------ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCcc
Confidence 4577776532 445 66664211 0 2357789999988877677899999998877789999976 777
Q ss_pred HHHH
Q psy16459 117 LEDL 120 (143)
Q Consensus 117 L~~l 120 (143)
+.+.
T Consensus 79 l~~~ 82 (244)
T cd05150 79 AAAL 82 (244)
T ss_pred HhHh
Confidence 7754
No 372
>KOG0586|consensus
Probab=86.76 E-value=4.2 Score=35.78 Aligned_cols=109 Identities=17% Similarity=0.081 Sum_probs=71.3
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCccc
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIP 94 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P 94 (143)
+=+.|.+.++..+ ||.|..+.+..|+... |||. ..++-.+. .....+..|+++++.+. -+++.
T Consensus 56 g~y~i~~tig~g~---------f~~V~La~~~~t~~~V-aiK~--idkt~ln~----~~~~k~~rev~imk~l~-HPnIv 118 (596)
T KOG0586|consen 56 GLYVIIKTIGKGN---------FAKVKLARHILTGTEV-AIKI--IDKTQLNP----SKRQKLGREVDIMKSLN-HPNIV 118 (596)
T ss_pred cceeeeeeeccce---------eEEEEeeEecCCCceE-EEEE--ehhcccCh----HHHHHHHHHHHHHHhcC-Cccee
Confidence 3455666665544 9999999999999888 7773 22221111 11223677888877653 36899
Q ss_pred EEEEeeecCCeeEEeecccCc-CHHHHHHhcCCCCCHHHHHHHHHHHh
Q psy16459 95 EVYYFGPCGKYNALVMELLGP-SLEDLFDLCNRKFTLKTVLMIAIQLE 141 (143)
Q Consensus 95 ~l~~~G~~~~~~~iVM~LlG~-sL~~l~~~~~~~fs~~T~~~ia~q~l 141 (143)
+++..-.....-|+||++.-. .+.+.....++.+. .++-..=.|++
T Consensus 119 kl~~v~~t~~~lylV~eya~~ge~~~yl~~~gr~~e-~~ar~~F~q~v 165 (596)
T KOG0586|consen 119 KLFSVIETEATLYLVMEYASGGELFDYLVKHGRMKE-KEARAKFRQIV 165 (596)
T ss_pred eeeeeeeecceeEEEEEeccCchhHHHHHhcccchh-hhhhhhhHHHH
Confidence 999999999999999999765 55555554444444 55555545543
No 373
>KOG0599|consensus
Probab=86.35 E-value=1.3 Score=35.97 Aligned_cols=95 Identities=17% Similarity=0.182 Sum_probs=66.8
Q ss_pred cCCCCCCceeEEEEecCCCCHH--HHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccCc-CHHHH
Q psy16459 44 TDKPSGGGYQALVLSLLGPSLQ--DLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLGP-SLEDL 120 (143)
Q Consensus 44 ~d~~~~~~~~a~~~Ellg~sl~--~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG~-sL~~l 120 (143)
..+.+++.|.+.+++..+.... ..+.. .-.-..|+.++.|..|-|++-++++.-..+.|-|+|.||+-+ .|-|+
T Consensus 37 i~k~t~~e~a~kii~~~at~~~~e~~~~~---~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~FlVFdl~prGELFDy 113 (411)
T KOG0599|consen 37 IHKETGKEFAVKIIDVTATTESGETPYEM---REATRQEISILRQVMGHPYIIDLQDVYESDAFVFLVFDLMPRGELFDY 113 (411)
T ss_pred hhcccccceeEEEEEecccccCCccHHHH---HHHHHHHHHHHHHhcCCCcEEEeeeeccCcchhhhhhhhcccchHHHH
Confidence 4556678888888887643322 11111 112456899999999999999999999999999999999976 45555
Q ss_pred HHhcCCCCCHHHHHHHHHHHhc
Q psy16459 121 FDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 121 ~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
.... =..|-+-+-+|..|+++
T Consensus 114 Lts~-VtlSEK~tR~iMrqlfe 134 (411)
T KOG0599|consen 114 LTSK-VTLSEKETRRIMRQLFE 134 (411)
T ss_pred hhhh-eeecHHHHHHHHHHHHH
Confidence 4432 35677777777777653
No 374
>KOG0658|consensus
Probab=85.93 E-value=1.2 Score=36.74 Aligned_cols=93 Identities=24% Similarity=0.291 Sum_probs=61.9
Q ss_pred EEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeee--cC---CeeEEe
Q psy16459 35 YFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGP--CG---KYNALV 109 (143)
Q Consensus 35 ~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~--~~---~~~~iV 109 (143)
.+||.||++....+++.+ |||=-+- + +++ -..|+.++..+ .-+.+-++..+-. .+ -|.-+|
T Consensus 35 GsFg~Vyq~~~~e~~~~v-AIKKv~~-----d------~r~-knrEl~im~~l-~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 35 GSFGVVYQAKLRETEEEV-AIKKVLQ-----D------KRY-KNRELQIMRKL-DHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred cccceEEEEEEcCCCcee-EEEEecC-----C------CCc-CcHHHHHHHhc-CCcCeeeEEEEEEecCCCchhHHHHH
Confidence 359999999999998877 7765431 1 111 23478888744 3334544443322 22 377889
Q ss_pred ecccCcCHHHHHHhc---CCCCCHHHHHHHHHHHh
Q psy16459 110 MELLGPSLEDLFDLC---NRKFTLKTVLMIAIQLE 141 (143)
Q Consensus 110 M~LlG~sL~~l~~~~---~~~fs~~T~~~ia~q~l 141 (143)
||.+..+|.+..+.. +++++.--+-....|++
T Consensus 101 leymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlf 135 (364)
T KOG0658|consen 101 LEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLF 135 (364)
T ss_pred HHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHH
Confidence 999999999987753 56777777766777764
No 375
>KOG0580|consensus
Probab=85.42 E-value=1.3 Score=35.01 Aligned_cols=108 Identities=20% Similarity=0.171 Sum_probs=64.2
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEE-ecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCccc
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVL-SLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIP 94 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~-Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P 94 (143)
-|+|=+.++.+ -||.||.+....++--. |+|+ +. ..+.+. +-...+..|+.|=..+ .-+++-
T Consensus 23 dfeigr~Lgkg---------kFG~vYlarekks~~Iv-alKVlfK-----sqi~~~-~v~~qlrREiEIqs~L-~hpnil 85 (281)
T KOG0580|consen 23 DFEIGRPLGKG---------KFGNVYLAREKKSLFIV-ALKVLFK-----SQILKT-QVEHQLRREIEIQSHL-RHPNIL 85 (281)
T ss_pred hccccccccCC---------ccccEeEeeeccCCcEE-EEeeeeH-----HHHHHh-cchhhhhheeEeeccc-CCccHH
Confidence 35555556443 39999999998888777 5544 31 111111 1011122222221111 125677
Q ss_pred EEEEeeecCCeeEEeecccCc-CH-HHHHHhcCCCCCHHHHHHHHHHH
Q psy16459 95 EVYYFGPCGKYNALVMELLGP-SL-EDLFDLCNRKFTLKTVLMIAIQL 140 (143)
Q Consensus 95 ~l~~~G~~~~~~~iVM~LlG~-sL-~~l~~~~~~~fs~~T~~~ia~q~ 140 (143)
++|.+-.++..-|+++|..+. .| .+|+....++|+-+.+.....|+
T Consensus 86 rlY~~fhd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~ 133 (281)
T KOG0580|consen 86 RLYGYFHDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQL 133 (281)
T ss_pred hhhhheeccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHH
Confidence 888888899999999999874 44 45554446788887777776664
No 376
>KOG1187|consensus
Probab=85.19 E-value=6.9 Score=32.15 Aligned_cols=94 Identities=22% Similarity=0.156 Sum_probs=64.2
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCC-eeEEeecccC
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGK-YNALVMELLG 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~-~~~iVM~LlG 114 (143)
+||.||++.-.++ ... |+| .+-..+-+. .....+|+.++.++. -+++-.++++-.++. ..++|-|.+-
T Consensus 87 gfg~VYkG~l~~~-~~v-AVK-~~~~~~~~~-------~~eF~~Ei~~ls~l~-H~Nlv~LlGyC~e~~~~~~LVYEym~ 155 (361)
T KOG1187|consen 87 GFGTVYKGVLSDG-TVV-AVK-RLSSNSGQG-------EREFLNEVEILSRLR-HPNLVKLLGYCLEGGEHRLLVYEYMP 155 (361)
T ss_pred CCeEEEEEEECCC-CEE-EEE-EecCCCCcc-------hhHHHHHHHHHhcCC-CcCcccEEEEEecCCceEEEEEEccC
Confidence 3899998876555 445 776 221111000 112677888888887 568999999999888 5999999998
Q ss_pred c-CHHHHHHhcCC-CCCHHHHHHHHHHH
Q psy16459 115 P-SLEDLFDLCNR-KFTLKTVLMIAIQL 140 (143)
Q Consensus 115 ~-sL~~l~~~~~~-~fs~~T~~~ia~q~ 140 (143)
. ||++....... ..+-.+=++||+.+
T Consensus 156 nGsL~d~L~~~~~~~L~W~~R~kIa~g~ 183 (361)
T KOG1187|consen 156 NGSLEDHLHGKKGEPLDWETRLKIALGA 183 (361)
T ss_pred CCCHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 7 99876543323 66777777887764
No 377
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=84.39 E-value=4.4 Score=28.38 Aligned_cols=65 Identities=15% Similarity=0.176 Sum_probs=44.2
Q ss_pred ccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccCc
Q psy16459 37 FGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLGP 115 (143)
Q Consensus 37 fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG~ 115 (143)
++.||.+.+. ++.| ++|.-.-+.+ .....+.|..++..+......|++++.+.. ..++||+.+..
T Consensus 11 ~~~vy~~~~~--~~~~-~lK~~~~~~~---------~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~--~~~lv~e~i~G 75 (170)
T cd05151 11 TNKNYRVEVA--NKKY-VVRIPGNGTE---------LLINRENEAENSKLAAEAGIGPKLYYFDPE--TGVLITEFIEG 75 (170)
T ss_pred cCceEEEEEC--CeEE-EEEeCCCCcc---------cccCHHHHHHHHHHHHHhCCCCceEEEeCC--CCeEEEEecCC
Confidence 6778888753 4455 8887532211 123467899999888766568999988654 35899998764
No 378
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=84.37 E-value=3.3 Score=30.38 Aligned_cols=80 Identities=21% Similarity=0.215 Sum_probs=46.8
Q ss_pred EccceeeccCCCCCCceeEEEEecCCC-CHHHHH---HHh----------CCCcchHHHHHHHHhhhcC-CcccEEEEee
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGP-SLQDLF---ELC----------GFRFSLKTVLMIAQQLQSN-KGIPEVYYFG 100 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~-sl~~l~---~~~----------~~~~sL~tE~~v~~ql~~~-~~~P~l~~~G 100 (143)
+||.||++.+. ++..+ ++|....+. +..... ... ..+.....|..+..++... ..+|..++.+
T Consensus 27 ~~g~Vy~~~~~-~g~~v-avK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~v~~~~~~~ 104 (198)
T cd05144 27 KESDVYLALDP-DGNPV-ALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFPVPKPIDWN 104 (198)
T ss_pred cceEEEEEEcC-CCCEE-EEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCCCCceeecC
Confidence 38999999875 56666 888644332 211110 000 0122356677777777554 3677777643
Q ss_pred ecCCeeEEeeccc-CcCHHHHH
Q psy16459 101 PCGKYNALVMELL-GPSLEDLF 121 (143)
Q Consensus 101 ~~~~~~~iVM~Ll-G~sL~~l~ 121 (143)
..++|||.+ |.+|.++.
T Consensus 105 ----~~~lv~e~~~g~~L~~~~ 122 (198)
T cd05144 105 ----RHAVVMEYIDGVELYRVR 122 (198)
T ss_pred ----CceEEEEEeCCcchhhcc
Confidence 458999976 56776653
No 379
>KOG0669|consensus
Probab=84.36 E-value=0.3 Score=39.18 Aligned_cols=93 Identities=20% Similarity=0.169 Sum_probs=58.3
Q ss_pred ccceeeccCCCCCCceeEEEEe-----cCCCCHHHHHHHhCCCcchHHHHHHHHhhhcC-----CcccEEEEeee--cCC
Q psy16459 37 FGKVMDKTDKPSGGGYQALVLS-----LLGPSLQDLFELCGFRFSLKTVLMIAQQLQSN-----KGIPEVYYFGP--CGK 104 (143)
Q Consensus 37 fG~vy~v~d~~~~~~~~a~~~E-----llg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~-----~~~P~l~~~G~--~~~ 104 (143)
||.||+++..++++.. |++.- -.|-.... -.|+.++..+... ..+++-...+. ...
T Consensus 30 fgeVFkAr~~n~~kkv-alkkvlmeneKeGfpita-----------lreikiL~~lkHenv~nliEic~tk~Tp~~r~r~ 97 (376)
T KOG0669|consen 30 FGEVFKARSKNTGKKV-ALKKVLMENEKEGFPITA-----------LREIKILQLLKHENVVNLIEICRTKATPTNRDRA 97 (376)
T ss_pred HHHHHHHhhcCccchh-HHHHHHHhccccCCcHHH-----------HHHHHHHHHhcchhHHHHHHHHhhccCCcccccc
Confidence 9999999999999875 54322 22222222 2344444443221 12233333332 234
Q ss_pred eeEEeecccCcCHHHHHHhcCCCCCHHHHHHHHHHHh
Q psy16459 105 YNALVMELLGPSLEDLFDLCNRKFTLKTVLMIAIQLE 141 (143)
Q Consensus 105 ~~~iVM~LlG~sL~~l~~~~~~~fs~~T~~~ia~q~l 141 (143)
-.|+||+++--+|.-|.....-+||++++-++..+.+
T Consensus 98 t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm 134 (376)
T KOG0669|consen 98 TFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLM 134 (376)
T ss_pred eeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHH
Confidence 5799999999999988765567999999988876654
No 380
>KOG0579|consensus
Probab=84.20 E-value=0.5 Score=42.41 Aligned_cols=107 Identities=17% Similarity=0.136 Sum_probs=67.8
Q ss_pred eeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEE
Q psy16459 17 FSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEV 96 (143)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l 96 (143)
|+|+.-+++ ..||+||++.++.++---.|-++|. ++-+++-. .-.|+.|+..+- -|.+-.+
T Consensus 34 WeIiGELGD---------GAFGKVyKA~nket~~lAAaKvIet--kseEELED-------ylVEIeILa~Cd-HP~ivkL 94 (1187)
T KOG0579|consen 34 WEIIGELGD---------GAFGKVYKAVNKETKLLAAAKVIET--KSEEELED-------YLVEIEILAECD-HPVIVKL 94 (1187)
T ss_pred HHHHhhhcC---------ccchhhhhhhcccchhhhhhhhhcc--cchhHHhh-------hhhhhhhhhcCC-ChHHHHH
Confidence 556666655 3599999998887766555666664 22222210 112333332221 1345556
Q ss_pred EEeeecCCeeEEeecccCc-CHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 97 YYFGPCGKYNALVMELLGP-SLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 97 ~~~G~~~~~~~iVM~LlG~-sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
++.-..++.-+|..+.+|- .+..+.-.+++.++-..+..+++|+|+
T Consensus 95 l~ayy~enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ld 141 (1187)
T KOG0579|consen 95 LSAYYFENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLD 141 (1187)
T ss_pred HHHHhccCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHH
Confidence 6655666778899999986 555555556999999999999999875
No 381
>KOG0589|consensus
Probab=83.77 E-value=7.8 Score=32.89 Aligned_cols=100 Identities=18% Similarity=0.066 Sum_probs=70.8
Q ss_pred EEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecC-CeeEEeeccc
Q psy16459 35 YFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCG-KYNALVMELL 113 (143)
Q Consensus 35 ~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~-~~~~iVM~Ll 113 (143)
.+||.++.|..+.++..|..-++.+-..+... +.+-..|..+..+++. |.+-.+.+.=..+ .+-+|||+.+
T Consensus 15 GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~-------r~~A~~E~~lis~~~h-P~iv~y~ds~~~~~~~l~Ivm~Y~ 86 (426)
T KOG0589|consen 15 GAFGSALLVRHKSDDKLYVLKKINLEKLTEPE-------RRSAIQEMDLLSKLLH-PNIVEYKDSFEEDGQLLCIVMEYC 86 (426)
T ss_pred cccchhhhhhhccCCceEEEEEEeccccCchh-------hHHHHHHHHHHHhccC-CCeeeeccchhcCCceEEEEEeec
Confidence 46999999999999998844455544332222 2256778888887443 4455555555444 5699999998
Q ss_pred C-cCHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 114 G-PSLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 114 G-~sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
- =+|.++.+.. +.-|.-..++.--.|++.
T Consensus 87 eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~ 117 (426)
T KOG0589|consen 87 EGGDLAQLIKEQKGVLFPEERILKWFVQILL 117 (426)
T ss_pred CCCCHHHHHHHHhhccccHHHHHHHHHHHHH
Confidence 5 6999987776 788999998888888753
No 382
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=83.59 E-value=2.4 Score=32.00 Aligned_cols=63 Identities=10% Similarity=0.034 Sum_probs=41.9
Q ss_pred eeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHHHhCCCcchHHHHHHHHhhh
Q psy16459 14 KCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFELCGFRFSLKTVLMIAQQLQ 88 (143)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~~~~~~~sL~tE~~v~~ql~ 88 (143)
..|+.+++.+ +.+++++++++.. .+.+.+++||.. |.+|.+........++......++.++.
T Consensus 53 ~~e~~~l~~l---~h~~i~~~~~~~~---------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~ 116 (267)
T cd05066 53 LSEASIMGQF---DHPNIIHLEGVVT---------KSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIA 116 (267)
T ss_pred HHHHHHHHhC---CCCCcceEEEEEe---------cCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 3456666555 3457888888765 455668999988 5688887655445567666666665543
No 383
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=83.24 E-value=4.4 Score=34.19 Aligned_cols=31 Identities=35% Similarity=0.535 Sum_probs=23.2
Q ss_pred CcccEEEEeeecCCeeEEeeccc-CcCHHHHHHh
Q psy16459 91 KGIPEVYYFGPCGKYNALVMELL-GPSLEDLFDL 123 (143)
Q Consensus 91 ~~~P~l~~~G~~~~~~~iVM~Ll-G~sL~~l~~~ 123 (143)
..+|+.++..... +++|||.+ |.+|.++...
T Consensus 220 v~vP~v~~~~~~~--~vLvmE~i~G~~L~~~~~~ 251 (437)
T TIGR01982 220 VYVPEVYWDRTSE--RVLTMEWIDGIPLSDIAAL 251 (437)
T ss_pred EEeCCEehhhcCC--ceEEEEeECCcccccHHHH
Confidence 3678888755443 79999999 7899887543
No 384
>KOG0983|consensus
Probab=82.82 E-value=1.6 Score=35.46 Aligned_cols=88 Identities=13% Similarity=0.038 Sum_probs=60.1
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccCc
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLGP 115 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG~ 115 (143)
.+|.|++..-..++.-. |+|.=.-..+-++.. .+-..+.|...-..|+.+-+.+++--.+.-.++-||+.+-
T Consensus 104 tcG~V~k~~~rs~~~ii-AVK~M~rt~Nkee~k-------RILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~ 175 (391)
T KOG0983|consen 104 TCGQVWKMRFRSTGHII-AVKQMRRTGNKEENK-------RILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMST 175 (391)
T ss_pred CccceEEEEEcccceEE-EEEeecccCCHHHHH-------HHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHH
Confidence 48899998888887766 554322111222211 1233455666666788899999998888889999999999
Q ss_pred CHHHHHHhcCCCCCHH
Q psy16459 116 SLEDLFDLCNRKFTLK 131 (143)
Q Consensus 116 sL~~l~~~~~~~fs~~ 131 (143)
.++.|.++..+.|.-.
T Consensus 176 C~ekLlkrik~piPE~ 191 (391)
T KOG0983|consen 176 CAEKLLKRIKGPIPER 191 (391)
T ss_pred HHHHHHHHhcCCchHH
Confidence 9999988764445443
No 385
>KOG1166|consensus
Probab=82.43 E-value=1.3 Score=41.18 Aligned_cols=94 Identities=20% Similarity=0.204 Sum_probs=54.3
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccCc
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLGP 115 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG~ 115 (143)
+||+||.+.+-+ ++.+ |+|.|. -++-++.|- .++..-++..+++.+ |-++..+-.-.+-.++|+++---
T Consensus 710 ~y~~vy~a~~~~-~~~~-alK~e~-P~~~WEfYI------~~q~~~RLk~~~~~~--~~~~~~a~~~~~~S~lv~ey~~~ 778 (974)
T KOG1166|consen 710 SYGSVYVATHSN-GKLV-ALKVEK-PPNPWEFYI------CLQVMERLKPQMLPS--IMHISSAHVFQNASVLVSEYSPY 778 (974)
T ss_pred cceEEEEeecCC-CcEE-EEEeec-CCCceeeee------hHHHHHhhchhhhcc--hHHHHHHHccCCcceeeeecccc
Confidence 499999998877 5555 999994 233333321 111111111222222 22222222233456888888764
Q ss_pred -CHHHHHHhcCCCCCHHHHHHHHHHHh
Q psy16459 116 -SLEDLFDLCNRKFTLKTVLMIAIQLE 141 (143)
Q Consensus 116 -sL~~l~~~~~~~fs~~T~~~ia~q~l 141 (143)
+|-|+-+ ..+...-.-++.++.|++
T Consensus 779 Gtlld~~N-~~~~m~e~lv~~~~~qml 804 (974)
T KOG1166|consen 779 GTLLDLIN-TNKVMDEYLVMFFSCQML 804 (974)
T ss_pred ccHHHhhc-cCCCCCchhhhHHHHHHH
Confidence 7777766 357777777888888876
No 386
>KOG0608|consensus
Probab=82.00 E-value=1.1 Score=40.24 Aligned_cols=83 Identities=18% Similarity=0.105 Sum_probs=58.1
Q ss_pred EEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-
Q psy16459 35 YFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL- 113 (143)
Q Consensus 35 ~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll- 113 (143)
..||+|-+|+..+|..-| |||.=- -.|+.+ .++.-..+.|-.|+.+. ...-+-++|+.-.+++.-|+|||.+
T Consensus 640 GAFGeV~Lv~KvDT~~lY-AmKTLr----KaDVl~-rnQvaHVKAERDILAEA-Dn~WVVrLyySFQDkdnLYFVMdYIP 712 (1034)
T KOG0608|consen 640 GAFGEVCLVRKVDTRALY-AMKTLR----KADVLM-RNQVAHVKAERDILAEA-DNEWVVRLYYSFQDKDNLYFVMDYIP 712 (1034)
T ss_pred cccceeEEEeecchhhHH-HHhhhH----HHHHHh-hhhhhhhhhhhhhHhhc-CCcceEEEEEEeccCCceEEEEeccC
Confidence 569999999999997766 886510 011111 13455677788777655 3346789999999999999999987
Q ss_pred CcCHHHHHHhc
Q psy16459 114 GPSLEDLFDLC 124 (143)
Q Consensus 114 G~sL~~l~~~~ 124 (143)
|-++..|.=++
T Consensus 713 GGDmMSLLIrm 723 (1034)
T KOG0608|consen 713 GGDMMSLLIRM 723 (1034)
T ss_pred CccHHHHHHHh
Confidence 56777775443
No 387
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=81.60 E-value=3.7 Score=31.37 Aligned_cols=62 Identities=19% Similarity=0.136 Sum_probs=41.6
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhh
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQ 88 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~ 88 (143)
.|+++++.+. .+++++++++.. .+.+.++++|..+.++.+........+.......++.++.
T Consensus 52 ~E~~~l~~l~---h~~i~~~~~~~~---------~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~ 113 (291)
T cd07844 52 REASLLKDLK---HANIVTLHDIIH---------TKKTLTLVFEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLL 113 (291)
T ss_pred HHHHHHhhCC---CcceeeEEEEEe---------cCCeEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence 3777777663 346788887765 5566799999999888876554444555555555555543
No 388
>KOG0614|consensus
Probab=81.56 E-value=0.097 Score=45.42 Aligned_cols=92 Identities=18% Similarity=0.063 Sum_probs=60.8
Q ss_pred EEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecc-c
Q psy16459 35 YFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMEL-L 113 (143)
Q Consensus 35 ~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~L-l 113 (143)
.+||+|..|.-......| |||+=-- ..+ -...+.....+|-+|+.+.. ++.+.++|.--++++|-||.||- +
T Consensus 431 GgFGRVELV~~~~~~~~f-AlKilkK----~hI-VdtkQqeHv~sEr~Im~~~~-s~fIvrLYrTfrd~kyvYmLmEaCl 503 (732)
T KOG0614|consen 431 GGFGRVELVKVNSQKATF-ALKILKK----KHI-VDTKQQEHVFSERNIMMECR-SDFIVRLYRTFRDSKYVYMLMEACL 503 (732)
T ss_pred CccceEEEEEecccchHH-HHHHHhH----hhc-cchhHHHHHHhHHHHHHhcC-chHHHHHHHHhccchhhhhhHHhhc
Confidence 349999988766555545 6654100 000 00112334566777777665 67889999999999999999997 5
Q ss_pred CcCHHHHHHhcCCCCCHHHHH
Q psy16459 114 GPSLEDLFDLCNRKFTLKTVL 134 (143)
Q Consensus 114 G~sL~~l~~~~~~~fs~~T~~ 134 (143)
|-.||.+.+.. +.|.-.|+-
T Consensus 504 GGElWTiLrdR-g~Fdd~tar 523 (732)
T KOG0614|consen 504 GGELWTILRDR-GSFDDYTAR 523 (732)
T ss_pred Cchhhhhhhhc-CCcccchhh
Confidence 78999886654 566655543
No 389
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=81.28 E-value=3.3 Score=31.37 Aligned_cols=61 Identities=10% Similarity=-0.040 Sum_probs=41.9
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhh
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQL 87 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql 87 (143)
.|+.+++.+. .+++++++.+.. .+.+.++++|..|.+|.+......+.+.......++.++
T Consensus 48 ~e~~~l~~~~---~~~i~~~~~~~~---------~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i 108 (286)
T cd07832 48 REIKALQACQ---HPYVVKLLDVFP---------HGSGFVLVMEYMPSDLSEVLRDEERPLPEAQVKSYMRML 108 (286)
T ss_pred HHHHHHHhCC---CCCCcceeeEEe---------cCCeeEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHH
Confidence 4666776663 457788877655 455669999999999998865544556666555555554
No 390
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=80.24 E-value=4.3 Score=31.25 Aligned_cols=62 Identities=19% Similarity=0.174 Sum_probs=41.3
Q ss_pred eeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhh
Q psy16459 14 KCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQL 87 (143)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql 87 (143)
..|+.+++.++ .+++.++++++. .+.+.+++||.+..++.+.....+...+......++.++
T Consensus 51 ~~E~~~l~~l~---h~niv~~~~~~~---------~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi 112 (288)
T cd07871 51 IREVSLLKNLK---HANIVTLHDIIH---------TERCLTLVFEYLDSDLKQYLDNCGNLMSMHNVKIFMFQL 112 (288)
T ss_pred HHHHHHHHhCC---CCCEeeEEEEEc---------CCCeEEEEEeCCCcCHHHHHHhcCCCCCHHHHHHHHHHH
Confidence 35777777763 356788887765 455669999999988887765554445555555555444
No 391
>KOG4279|consensus
Probab=79.70 E-value=5.9 Score=36.28 Aligned_cols=97 Identities=15% Similarity=0.057 Sum_probs=63.6
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc-C
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL-G 114 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll-G 114 (143)
-||.||.++|..|.-.. |+|-=.. +.+.-..-|.-|+.+=.++... .+-++.++-.++.|.-|-||-+ |
T Consensus 587 TYG~VYA~RD~~tqvrI-aIKEIpe--------kdsr~~QPLhEEIaLH~~LrHk-NIVrYLGs~senGf~kIFMEqVPG 656 (1226)
T KOG4279|consen 587 TYGTVYAARDMDTQVRI-AIKEIPE--------KDSREVQPLHEEIALHSTLRHK-NIVRYLGSVSENGFFKIFMEQVPG 656 (1226)
T ss_pred ceeEEEeeccccceeEE-Eeeeccc--------ccchhhccHHHHHHHHHHHhhH-hHHHHhhccCCCCeEEEEeecCCC
Confidence 39999999999998876 6653221 1111123355565555555332 4566666666667777777765 7
Q ss_pred cCHHHHHHhcCCCC--CHHHHHHHHHHHhc
Q psy16459 115 PSLEDLFDLCNRKF--TLKTVLMIAIQLEG 142 (143)
Q Consensus 115 ~sL~~l~~~~~~~f--s~~T~~~ia~q~l~ 142 (143)
-||++|.+.-.+-+ .-+|.-....|+|+
T Consensus 657 GSLSsLLrskWGPlKDNEstm~fYtkQILe 686 (1226)
T KOG4279|consen 657 GSLSSLLRSKWGPLKDNESTMNFYTKQILE 686 (1226)
T ss_pred CcHHHHHHhccCCCccchhHHHHHHHHHHH
Confidence 89999988765544 77777777777764
No 392
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=79.63 E-value=3 Score=33.57 Aligned_cols=62 Identities=15% Similarity=0.150 Sum_probs=39.9
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHHHhCCCcchHHHHHHHHhh
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFELCGFRFSLKTVLMIAQQL 87 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~~~~~~~sL~tE~~v~~ql 87 (143)
++.|+.+++.+ +.+++++++++.. ++.+.+++||.+ |.+|.++... .+.+.......++.++
T Consensus 48 ~~~E~~il~~l---~hp~iv~~~~~~~---------~~~~~~lv~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~ql 110 (377)
T cd05629 48 VKAERDVLAES---DSPWVVSLYYSFQ---------DAQYLYLIMEFLPGGDLMTMLIK-YDTFSEDVTRFYMAEC 110 (377)
T ss_pred HHHHHHHHHhC---CCCCcceEEEEEE---------cCCeeEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHH
Confidence 44566776554 4567888887766 566679999987 6788776543 2345555544445444
No 393
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=79.41 E-value=4.4 Score=30.35 Aligned_cols=61 Identities=7% Similarity=-0.031 Sum_probs=39.6
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHHHhCCCcchHHHHHHHHhh
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFELCGFRFSLKTVLMIAQQL 87 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~~~~~~~sL~tE~~v~~ql 87 (143)
.|+++++.++ .+++++++++.. ...+.++++|.. |.+|.+........++......+..++
T Consensus 48 ~e~~~l~~l~---~~~i~~~~~~~~---------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi 109 (256)
T cd05059 48 EEAKVMMKLS---HPNLVQLYGVCT---------KQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDV 109 (256)
T ss_pred HHHHHHHhCC---CCCEEEEEEEEc---------CCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHH
Confidence 4777777663 457888887765 455668999987 778887654433345555555555554
No 394
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=78.61 E-value=12 Score=31.46 Aligned_cols=90 Identities=20% Similarity=0.190 Sum_probs=51.6
Q ss_pred ccceeeccCCCCCCceeEEEEec-----CCCCHHHHHHHhCCCcchHHHHHHHHhhhc--CCcccEEEEeeecCCeeEEe
Q psy16459 37 FGKVMDKTDKPSGGGYQALVLSL-----LGPSLQDLFELCGFRFSLKTVLMIAQQLQS--NKGIPEVYYFGPCGKYNALV 109 (143)
Q Consensus 37 fG~vy~v~d~~~~~~~~a~~~El-----lg~sl~~l~~~~~~~~sL~tE~~v~~ql~~--~~~~P~l~~~G~~~~~~~iV 109 (143)
++.||.|.+.+..+.+ ++|..+ .|.+.. + . .-....|...+..+.. ...+|+++.++. ...++|
T Consensus 39 ~N~VyrV~~~~g~~sv-IVKqa~p~~r~~g~~wp-l---~--~eR~~~Eae~L~~l~~~~p~~VPkV~~~D~--~~~~lV 109 (401)
T PRK09550 39 LNLVFRVSDTEGGKSV-IVKQALPYVRVVGESWP-L---T--LDRARIEAEALKIQAKYVPDLVPKVYHYDE--ELAVTV 109 (401)
T ss_pred eEEEEEEEeCCCCeEE-EEEecCccccccccccc-c---c--HHHHHHHHHHHHHHHhhCCCCCCeEEEECC--CCCEEE
Confidence 6678999886443456 888753 111100 0 0 0013445666655543 347899999966 448999
Q ss_pred ecccCcCHHHHHHhc--CCCCCHHHHHHHH
Q psy16459 110 MELLGPSLEDLFDLC--NRKFTLKTVLMIA 137 (143)
Q Consensus 110 M~LlG~sL~~l~~~~--~~~fs~~T~~~ia 137 (143)
||-+.+ ...+|..+ +..|. ..+.++|
T Consensus 110 ME~L~~-~~~lr~~Ll~g~~~p-~~a~~iG 137 (401)
T PRK09550 110 MEDLSD-HKILRKGLIDGKKYP-KLAEHIG 137 (401)
T ss_pred EecCCC-ccHHHHHHhcCCccH-HHHHHHH
Confidence 999985 45555554 44443 4444444
No 395
>KOG0582|consensus
Probab=78.50 E-value=40 Score=29.12 Aligned_cols=116 Identities=14% Similarity=0.049 Sum_probs=76.4
Q ss_pred ccceeeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhh
Q psy16459 9 SMSLLKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQ 88 (143)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~ 88 (143)
.-+.-.-+++++-.++.+- .+.||.++-+.+++.. |||.--+-+.-.++ -.+.-|+..+..+.
T Consensus 20 ~~p~n~~~YeL~e~IG~G~---------sa~V~~A~c~p~~e~V-AIK~inLEkc~~~l-------d~l~kE~~~msl~~ 82 (516)
T KOG0582|consen 20 EFPLNAKDYELQEVIGVGA---------SAVVYLARCIPTNEVV-AIKIINLEKCNNDL-------DALRKEVQTMSLID 82 (516)
T ss_pred cCCCCccceeEEEEEeccc---------eeEeeeeeecccCCEE-EEEEeehhhhhhhH-------HHHHHHHHHhhhcC
Confidence 3444445666665553321 2679999999999665 88765332221111 13455666655443
Q ss_pred cCCcccEEEEeeecCCeeEEeecccC-cCHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 89 SNKGIPEVYYFGPCGKYNALVMELLG-PSLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 89 ~~~~~P~l~~~G~~~~~~~iVM~LlG-~sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
-|.+-+.+..-..+..-|+||.++. -|+.++.+.. ...|.-.++..|..+.|+
T Consensus 83 -HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~Lk 137 (516)
T KOG0582|consen 83 -HPNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLK 137 (516)
T ss_pred -CCCcceEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHH
Confidence 3567777777788889999999875 5888887776 677988888888877764
No 396
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=78.46 E-value=5.8 Score=31.68 Aligned_cols=63 Identities=17% Similarity=0.184 Sum_probs=37.3
Q ss_pred eeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhh--cCCcccEEEEeeecCCeeEEeecccCcC
Q psy16459 40 VMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQ--SNKGIPEVYYFGPCGKYNALVMELLGPS 116 (143)
Q Consensus 40 vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~--~~~~~P~l~~~G~~~~~~~iVM~LlG~s 116 (143)
.|.+. .+++.| ++|.-. ....--.+.|..-+..+. ....+|+.+..|..+...|+|||.+-..
T Consensus 33 a~~~~--~~~~~~-FvK~~~-----------~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~~~ 97 (288)
T PF03881_consen 33 AYRLD--TDGGSY-FVKVNS-----------ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLEMG 97 (288)
T ss_dssp EEEEE--TTS-EE-EEEEEE-----------GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE-----
T ss_pred eEEEE--CCCccE-EEEecC-----------hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeecCC
Confidence 44444 334556 888863 111234678888888884 3568999999999988899999997544
No 397
>KOG0667|consensus
Probab=78.22 E-value=1.5 Score=38.50 Aligned_cols=67 Identities=18% Similarity=0.107 Sum_probs=52.3
Q ss_pred eeeeeeeccC---CCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHh-CCCcchHHHHHHHHhhhcC
Q psy16459 15 CQFSLEGMED---DPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELC-GFRFSLKTVLMIAQQLQSN 90 (143)
Q Consensus 15 ~~~~~~~~~~---~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~-~~~~sL~tE~~v~~ql~~~ 90 (143)
.|+.||..+. ..+..+|-++++|=. ....-+||.|+++.+|-++.+.. .+.+++.....++.|+..+
T Consensus 231 ~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~---------fr~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~ 301 (586)
T KOG0667|consen 231 IEIRILELLNKHDPDDKYNIVRMLDYFY---------FRNHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTA 301 (586)
T ss_pred HHHHHHHHHhccCCCCCeeEEEeeeccc---------cccceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Confidence 3677777665 555668889988765 56666999999999999998766 4678899888888887654
No 398
>KOG0607|consensus
Probab=77.66 E-value=1.5 Score=36.36 Aligned_cols=91 Identities=19% Similarity=0.203 Sum_probs=64.1
Q ss_pred ccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhC-CCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeeccc--
Q psy16459 37 FGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCG-FRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELL-- 113 (143)
Q Consensus 37 fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~-~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~Ll-- 113 (143)
||.|--...+.|+..|..-++| +..+ .+...-.|+....+.++-+++-+++.+-.++...|+|||-+
T Consensus 91 yasVqtcv~i~t~~EYAVKiid----------Kq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~G 160 (463)
T KOG0607|consen 91 YASVQTCVSIQTGKEYAVKIID----------KQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRG 160 (463)
T ss_pred ceeeeeeeeeccchhhhhhhhh----------cCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccC
Confidence 5555555666777777333333 2221 23446679999999999999999999999999999999976
Q ss_pred CcCHHHHHHhcCCCCCHHHHHHHHHH
Q psy16459 114 GPSLEDLFDLCNRKFTLKTVLMIAIQ 139 (143)
Q Consensus 114 G~sL~~l~~~~~~~fs~~T~~~ia~q 139 (143)
||=|+.+.+. +.|+-.-+-++...
T Consensus 161 GplLshI~~~--~~F~E~EAs~vvkd 184 (463)
T KOG0607|consen 161 GPLLSHIQKR--KHFNEREASRVVKD 184 (463)
T ss_pred chHHHHHHHh--hhccHHHHHHHHHH
Confidence 4666666553 77887776665443
No 399
>KOG0587|consensus
Probab=77.60 E-value=3.2 Score=38.22 Aligned_cols=53 Identities=19% Similarity=0.197 Sum_probs=39.9
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCC-CCHHHHHHHh
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLG-PSLQDLFELC 71 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg-~sl~~l~~~~ 71 (143)
+..|+.||+.. ...++++++|++|. -.|++.++.- ++|||++| .|..|+-+..
T Consensus 62 iE~eynil~~~--~~hpnv~~fyg~~~---k~~~~~~DqL-WLVMEfC~gGSVTDLVKn~ 115 (953)
T KOG0587|consen 62 IELEYNMLKKY--SHHPNVATFYGAFI---KKDPGNGDQL-WLVMEFCGGGSVTDLVKNT 115 (953)
T ss_pred HHHHHHHHHhc--cCCCCcceEEEEEE---EecCCCCCeE-EEEeeccCCccHHHHHhhh
Confidence 34577888877 77889999987654 4566777777 99999986 4777887655
No 400
>KOG0576|consensus
Probab=77.51 E-value=0.34 Score=43.24 Aligned_cols=88 Identities=17% Similarity=0.124 Sum_probs=55.6
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCce--eEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCc
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGY--QALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKG 92 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~--~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~ 92 (143)
-+|+.++.++.. .||.||+++|+.+++-- ..+|+|.. . .-..+..|+.+...... +.
T Consensus 15 ddyellqrvgsg---------TygdvyKaRd~~s~elaavkvVkLep~-d----------d~~~iqqei~~~~dc~h-~n 73 (829)
T KOG0576|consen 15 DDYELLQRVGSG---------TYGDVYKARDKRSGELAAVKVVKLEPG-D----------DFSGIQQEIGMLRDCRH-PN 73 (829)
T ss_pred cchhheeeecCC---------cccchhhhcccccCchhhheeeeccCC-c----------cccccccceeeeecCCC-cC
Confidence 356777766442 39999999999999854 23344431 1 12234555555443322 24
Q ss_pred ccEEEEeeecCCeeEEeecccCc-CHHHHHHh
Q psy16459 93 IPEVYYFGPCGKYNALVMELLGP-SLEDLFDL 123 (143)
Q Consensus 93 ~P~l~~~G~~~~~~~iVM~LlG~-sL~~l~~~ 123 (143)
++-+++.=-++.--++.||.+|- +|+|++.-
T Consensus 74 ivay~gsylr~dklwicMEycgggslQdiy~~ 105 (829)
T KOG0576|consen 74 IVAYFGSYLRRDKLWICMEYCGGGSLQDIYHV 105 (829)
T ss_pred hHHHHhhhhhhcCcEEEEEecCCCcccceeee
Confidence 55565555566778999999995 88887653
No 401
>KOG0578|consensus
Probab=77.48 E-value=3.9 Score=35.65 Aligned_cols=94 Identities=16% Similarity=0.080 Sum_probs=64.8
Q ss_pred ccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccC-c
Q psy16459 37 FGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLG-P 115 (143)
Q Consensus 37 fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG-~ 115 (143)
-|.||.+.++.++....+-.|++- ...++.-+-+|+.|+...... ++-.++..-..++.-|+|||.+. -
T Consensus 286 SG~vy~A~~~~~~~~VaiK~m~l~---------~Q~~keLilnEi~Vm~~~~H~-NiVnfl~Sylv~deLWVVMEym~gg 355 (550)
T KOG0578|consen 286 TGGVYVARKISTKQEVAIKRMDLR---------KQPKKELLLNEILVMRDLHHP-NIVNFLDSYLVGDELWVVMEYMEGG 355 (550)
T ss_pred ccceeeeeeccCCceEEEEEEEec---------cCCchhhhHHHHHHHHhccch-HHHHHHHHhcccceeEEEEeecCCC
Confidence 566999999999999866677752 234456688899998876543 33344443333477899999885 5
Q ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 116 SLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 116 sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+|.|+-.. -.++-.....|..++|.
T Consensus 356 sLTDvVt~--~~~~E~qIA~Icre~l~ 380 (550)
T KOG0578|consen 356 SLTDVVTK--TRMTEGQIAAICREILQ 380 (550)
T ss_pred chhhhhhc--ccccHHHHHHHHHHHHH
Confidence 89888664 34677777766666653
No 402
>KOG2345|consensus
Probab=76.91 E-value=5.9 Score=31.69 Aligned_cols=106 Identities=17% Similarity=0.106 Sum_probs=65.2
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHh-----CCCcchHHHHHHHHhhhc
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELC-----GFRFSLKTVLMIAQQLQS 89 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~-----~~~~sL~tE~~v~~ql~~ 89 (143)
-++.|.+.++-+| |..||.|....|++.| |||+=+. ++.++.-... -++|..+..+++......
T Consensus 21 ~Ryri~~~LgeGG---------fsfv~LV~~~s~~~~Y-AlKkI~c-~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~ 89 (302)
T KOG2345|consen 21 KRYRIQRLLGEGG---------FSFVDLVKGLSTGHLY-ALKKILC-HSQEDIEEALREIDNHRKFNSPNVLRLVDHQLR 89 (302)
T ss_pred ceEEEeeeecCCC---------ceeeeeecccCcccch-hhheeec-cchHHHHHHHHHHHHHHhhCCcchHHHHHHHHH
Confidence 3678888887766 7779999999999988 9988554 4444332211 133333444444332221
Q ss_pred CCcccEEEEeeecCCeeEEeecccCcC-HHHHHHhc---CCCCCHHHHHHHHHH
Q psy16459 90 NKGIPEVYYFGPCGKYNALVMELLGPS-LEDLFDLC---NRKFTLKTVLMIAIQ 139 (143)
Q Consensus 90 ~~~~P~l~~~G~~~~~~~iVM~LlG~s-L~~l~~~~---~~~fs~~T~~~ia~q 139 (143)
..+-+....|++.+..-.. |.|-.+.+ +..+|-.-.+++-.+
T Consensus 90 --------~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~g 135 (302)
T KOG2345|consen 90 --------EEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLG 135 (302)
T ss_pred --------hhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHH
Confidence 1122445689999888764 88776654 336777777766544
No 403
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=76.80 E-value=6.2 Score=29.83 Aligned_cols=61 Identities=10% Similarity=0.020 Sum_probs=38.5
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCC-CHHHHHHHhCCCcchHHHHHHHHhhh
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGP-SLQDLFELCGFRFSLKTVLMIAQQLQ 88 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~-sl~~l~~~~~~~~sL~tE~~v~~ql~ 88 (143)
|+.+++.+ +.+++++++++.. .+.+.+++||..+. +|.+.........+......++.++.
T Consensus 56 e~~~l~~l---~h~~iv~~~~~~~---------~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~ 117 (266)
T cd05064 56 EALTLGQF---DHSNIVRLEGVIT---------RGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLA 117 (266)
T ss_pred HHHHHhcC---CCCCcCeEEEEEe---------cCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence 56666554 3568888887654 44455899998854 67666544344556666666665554
No 404
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=76.51 E-value=3 Score=32.15 Aligned_cols=53 Identities=8% Similarity=-0.003 Sum_probs=36.7
Q ss_pred CCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhh
Q psy16459 26 PPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQL 87 (143)
Q Consensus 26 ~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql 87 (143)
.+.+++++++++.. .+.+.++++|..+.++.+++......++......+..++
T Consensus 71 ~~~~~i~~~~~~~~---------~~~~~~~v~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i 123 (296)
T cd06618 71 HDCPYIVKCYGYFI---------TDSDVFICMELMSTCLDKLLKRIQGPIPEDILGKMTVAI 123 (296)
T ss_pred cCCCchHhhheeee---------cCCeEEEEeeccCcCHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 45678999888766 455669999999998888876655455444444444443
No 405
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=75.21 E-value=6.8 Score=29.70 Aligned_cols=63 Identities=6% Similarity=0.004 Sum_probs=42.8
Q ss_pred eeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHHHhCCCcchHHHHHHHHhhh
Q psy16459 14 KCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFELCGFRFSLKTVLMIAQQLQ 88 (143)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~~~~~~~sL~tE~~v~~ql~ 88 (143)
..|+++++.+. .+++++++++.. .+.+.+++||.. |.++.++....++.++......++.++.
T Consensus 50 ~~e~~~l~~l~---h~~i~~~~~~~~---------~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~ 113 (280)
T cd06611 50 MVEIDILSECK---HPNIVGLYEAYF---------YENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQML 113 (280)
T ss_pred HHHHHHHHhCC---CCceeEEEEEEe---------cCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 34777777663 467888888765 455669999987 4477777655555666666666666653
No 406
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=74.81 E-value=4.7 Score=30.93 Aligned_cols=62 Identities=15% Similarity=0.023 Sum_probs=40.4
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHHHhCCCcchHHHHHHHHhh
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFELCGFRFSLKTVLMIAQQL 87 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~~~~~~~sL~tE~~v~~ql 87 (143)
+..|+++++.++ .+++++++.+.. .+.+.+++||.. |.+|.+..... +.+.......++.++
T Consensus 48 ~~~e~~~l~~l~---h~~i~~~~~~~~---------~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qi 110 (290)
T cd05580 48 VLNEKRILQSIR---HPFLVNLYGSFQ---------DDSNLYLVMEYVPGGELFSHLRKS-GRFPEPVARFYAAQV 110 (290)
T ss_pred HHHHHHHHHhCC---CCCccceeeEEE---------cCCeEEEEEecCCCCCHHHHHHHc-CCCCHHHHHHHHHHH
Confidence 344677777663 457888887765 555669999999 88988775433 344444444444443
No 407
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=74.63 E-value=8.6 Score=29.71 Aligned_cols=62 Identities=13% Similarity=-0.055 Sum_probs=40.6
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhh
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQ 88 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~ 88 (143)
.|+.+++.+. -+++.+++.+.. .+.+.+++||..+.++.+........+..+....++.++.
T Consensus 52 ~E~~~l~~l~---h~niv~~~~~~~---------~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~ 113 (303)
T cd07869 52 REASLLKGLK---HANIVLLHDIIH---------TKETLTLVFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLL 113 (303)
T ss_pred HHHHHHhhCC---CCCcCeEEEEEe---------cCCeEEEEEECCCcCHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence 4667776663 346777777665 4556699999999888876554444555555555555543
No 408
>KOG0986|consensus
Probab=74.49 E-value=6 Score=34.24 Aligned_cols=98 Identities=17% Similarity=0.093 Sum_probs=61.1
Q ss_pred ccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccC-c
Q psy16459 37 FGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLG-P 115 (143)
Q Consensus 37 fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG-~ 115 (143)
||.||...-..|++-| |+|. |+..+-...+..++...-+...+..+++.+-.+-+.-.+.+.-.+||+|.+ -
T Consensus 198 FGEV~acqvraTGKMY-AcKk------L~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtlMNGG 270 (591)
T KOG0986|consen 198 FGEVCACQVRATGKMY-ACKK------LDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTLMNGG 270 (591)
T ss_pred ccceeEEEEecchhhH-HHHH------HHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEeecCC
Confidence 9999988888888888 5532 333332222233333333333334445555555555566778889999985 4
Q ss_pred CHH-HHHHhcCCCCCHHHHHHHHHHHh
Q psy16459 116 SLE-DLFDLCNRKFTLKTVLMIAIQLE 141 (143)
Q Consensus 116 sL~-~l~~~~~~~fs~~T~~~ia~q~l 141 (143)
+|. .+.+..+..|+...+.--|.|++
T Consensus 271 DLkfHiyn~g~~gF~e~ra~FYAAEi~ 297 (591)
T KOG0986|consen 271 DLKFHIYNHGNPGFDEQRARFYAAEII 297 (591)
T ss_pred ceeEEeeccCCCCCchHHHHHHHHHHH
Confidence 776 44444366899999888887764
No 409
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=74.16 E-value=9.6 Score=27.67 Aligned_cols=74 Identities=18% Similarity=0.073 Sum_probs=47.9
Q ss_pred ccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcC-CcccEEEEeeecCC---eeEEeecc
Q psy16459 37 FGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSN-KGIPEVYYFGPCGK---YNALVMEL 112 (143)
Q Consensus 37 fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~-~~~P~l~~~G~~~~---~~~iVM~L 112 (143)
.+.+|++...+ ++.| ++|....+... .....+..|..++..+... ..+|+++.+...+. ..|+||+.
T Consensus 11 ~n~~~~v~~~~-g~~~-ilK~~~~~~~~-------~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~ 81 (223)
T cd05154 11 SNLTYLLTAGG-GRRL-VLRRPPPGALL-------PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMER 81 (223)
T ss_pred cceEEEEEecC-Ccce-EEEeCCCcccC-------cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEE
Confidence 56788887643 3456 88886433211 1133578899998888764 34788888877643 56899998
Q ss_pred cCc-CHHH
Q psy16459 113 LGP-SLED 119 (143)
Q Consensus 113 lG~-sL~~ 119 (143)
+.- ++.+
T Consensus 82 i~G~~l~~ 89 (223)
T cd05154 82 VDGRVLRD 89 (223)
T ss_pred eCCEecCC
Confidence 853 4433
No 410
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=73.37 E-value=5 Score=30.72 Aligned_cols=62 Identities=6% Similarity=-0.062 Sum_probs=40.5
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhh
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQ 88 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~ 88 (143)
.|+++++.+. .+++.+++++.. .+.+.++++|..+.+|.++.......++......++.++.
T Consensus 51 ~e~~~l~~~~---h~~i~~~~~~~~---------~~~~~~lv~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~ 112 (298)
T cd07841 51 REIKLLQELK---HPNIIGLLDVFG---------HKSNINLVFEFMETDLEKVIKDKSIVLTPADIKSYMLMTL 112 (298)
T ss_pred HHHHHHhhcC---CCCChhhhheee---------cCCEEEEEEcccCCCHHHHHhccCCCCCHHHHHHHHHHHH
Confidence 3666666663 356777776665 4556799999999998887543322456555566666544
No 411
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=73.12 E-value=7.3 Score=30.99 Aligned_cols=37 Identities=22% Similarity=0.196 Sum_probs=28.3
Q ss_pred HHHHHHHHhhhc--CCcccEEEEeeecCCeeEEeecccC
Q psy16459 78 KTVLMIAQQLQS--NKGIPEVYYFGPCGKYNALVMELLG 114 (143)
Q Consensus 78 ~tE~~v~~ql~~--~~~~P~l~~~G~~~~~~~iVM~LlG 114 (143)
..|+.=+..|.. ...+|+.+..|....+.|+||+.|-
T Consensus 56 ~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~ 94 (286)
T COG3001 56 TAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLP 94 (286)
T ss_pred HHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeecc
Confidence 445555555543 3579999999999999999999874
No 412
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=73.09 E-value=8.7 Score=29.79 Aligned_cols=61 Identities=18% Similarity=0.169 Sum_probs=40.3
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhh
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQL 87 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql 87 (143)
.|+++++.+. .+++.+++.+.. .+...+++||.+..++.+.....+...+......++.++
T Consensus 53 ~E~~~l~~l~---h~~iv~~~~~~~---------~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi 113 (309)
T cd07872 53 REVSLLKDLK---HANIVTLHDIVH---------TDKSLTLVFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQI 113 (309)
T ss_pred HHHHHHHhCC---CCCcceEEEEEe---------eCCeEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHH
Confidence 4677776662 356777877655 445569999999988887765555445555555555554
No 413
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=72.88 E-value=10 Score=28.67 Aligned_cols=35 Identities=26% Similarity=0.385 Sum_probs=27.6
Q ss_pred HHHHHHHHhhhcC-CcccEEEEeeecCCeeEEeecccCcC
Q psy16459 78 KTVLMIAQQLQSN-KGIPEVYYFGPCGKYNALVMELLGPS 116 (143)
Q Consensus 78 ~tE~~v~~ql~~~-~~~P~l~~~G~~~~~~~iVM~LlG~s 116 (143)
+.|.+.+.++... ..+|+.+.+ ..+++|||.+|.+
T Consensus 74 ~kE~r~L~rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~ 109 (197)
T cd05146 74 EKEMHNLKRMQKAGIPCPEVVVL----KKHVLVMSFIGDD 109 (197)
T ss_pred HHHHHHHHHHHHcCCCCCeEEEe----cCCEEEEEEcCCC
Confidence 3788888887664 578999986 5689999999853
No 414
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=72.83 E-value=8.6 Score=28.87 Aligned_cols=65 Identities=11% Similarity=0.067 Sum_probs=41.4
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHHHhCCCcchHHHHHHHHhhhc
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFELCGFRFSLKTVLMIAQQLQS 89 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~~~~~~~sL~tE~~v~~ql~~ 89 (143)
+..|+.+++.++ .+++++++++.. .+.+.+++||.. +.++.+........+.......++.++..
T Consensus 46 ~~~e~~~l~~l~---h~~i~~~~~~~~---------~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~ 111 (256)
T cd05113 46 FIEEAKVMMKLS---HEKLVQLYGVCT---------KQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCE 111 (256)
T ss_pred HHHHHHHHhcCC---CCCeeeEEEEEc---------cCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 344777777663 468889988765 444558999986 45777765443345566555666555433
No 415
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=72.83 E-value=8.8 Score=29.56 Aligned_cols=61 Identities=18% Similarity=0.164 Sum_probs=40.9
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhh
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQL 87 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql 87 (143)
.|+.+++.++ .+++++++.+.. .+.+.++++|..+.++.+........+.......++.++
T Consensus 53 ~E~~~l~~l~---h~nI~~~~~~~~---------~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi 113 (301)
T cd07873 53 REVSLLKDLK---HANIVTLHDIIH---------TEKSLTLVFEYLDKDLKQYLDDCGNSINMHNVKLFLFQL 113 (301)
T ss_pred HHHHHHHhcC---CCCcceEEEEEe---------cCCeEEEEEeccccCHHHHHHhcCCCCCHHHHHHHHHHH
Confidence 4677776663 356888887765 555669999999988887765544455555555555554
No 416
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=72.64 E-value=5.3 Score=29.45 Aligned_cols=65 Identities=20% Similarity=0.102 Sum_probs=44.6
Q ss_pred eeeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHHHh--------CCCcchHHHHH
Q psy16459 12 LLKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFELC--------GFRFSLKTVLM 82 (143)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~~~--------~~~~sL~tE~~ 82 (143)
.++.|+.+++.+. .+++++++.+.. .+.+.+++||.. |.+|.+..... ...++......
T Consensus 42 ~~~~e~~~l~~~~---~~~i~~~~~~~~---------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 109 (262)
T cd00192 42 DFLKEARVMKKLG---HPNVVRLLGVCT---------EEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLS 109 (262)
T ss_pred HHHHHHHHHhhcC---CCChheeeeeec---------CCCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHH
Confidence 4455777777763 567888877655 344559999998 88998886554 34566666666
Q ss_pred HHHhhh
Q psy16459 83 IAQQLQ 88 (143)
Q Consensus 83 v~~ql~ 88 (143)
++.++.
T Consensus 110 ~~~~l~ 115 (262)
T cd00192 110 FAIQIA 115 (262)
T ss_pred HHHHHH
Confidence 666654
No 417
>KOG4257|consensus
Probab=72.36 E-value=20 Score=32.54 Aligned_cols=60 Identities=17% Similarity=0.153 Sum_probs=38.6
Q ss_pred HHHHHHhhhcCCcccEEEEeeecCCeeEEeecccCc-CHHHHHHhcCCCCCHHHHHHHHHHHh
Q psy16459 80 VLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLGP-SLEDLFDLCNRKFTLKTVLMIAIQLE 141 (143)
Q Consensus 80 E~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG~-sL~~l~~~~~~~fs~~T~~~ia~q~l 141 (143)
|..++.+. .-+|+-++++.-. +..-||||||.-. -|..+.+.....+++.|.+..++|+-
T Consensus 441 Ea~iMrnf-dHphIikLIGv~~-e~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~ 501 (974)
T KOG4257|consen 441 EASIMRNF-DHPHIIKLIGVCV-EQPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQIC 501 (974)
T ss_pred HHHHHHhC-CCcchhheeeeee-ccceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHH
Confidence 44444333 2357878877654 3468999999742 33343343355788999999999863
No 418
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=72.08 E-value=19 Score=31.43 Aligned_cols=80 Identities=21% Similarity=0.228 Sum_probs=47.1
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHH--------H--------------------------HHhCCCcchHHHH
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDL--------F--------------------------ELCGFRFSLKTVL 81 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l--------~--------------------------~~~~~~~sL~tE~ 81 (143)
++|+||.+...++++.+ |+|.-- |..... + +...+...+..|.
T Consensus 131 SiaQVh~A~l~~~G~~V-AVKV~r--P~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~~Ea 207 (537)
T PRK04750 131 SIAQVHFARLKDNGREV-VVKVLR--PDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLMREA 207 (537)
T ss_pred CccEEEEEEECCCCCEE-EEEEeC--cchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHHHHH
Confidence 58999999998888887 777653 332111 0 0001112233344
Q ss_pred HHHHhhh----cC--CcccEEEEeeecCCeeEEeeccc-CcCHHHH
Q psy16459 82 MIAQQLQ----SN--KGIPEVYYFGPCGKYNALVMELL-GPSLEDL 120 (143)
Q Consensus 82 ~v~~ql~----~~--~~~P~l~~~G~~~~~~~iVM~Ll-G~sL~~l 120 (143)
.-+.++. +. ..+|+.++-=.. .+++|||.+ |.++.++
T Consensus 208 ~N~~~~~~~f~~~~~v~VP~v~~d~st--~~VLvmE~i~G~~l~d~ 251 (537)
T PRK04750 208 ANASQLRRNFEDSDMLYVPEVYWDYCS--ETVMVMERMYGIPVSDV 251 (537)
T ss_pred HHHHHHHHHccCCCCeecceeecccCC--CceEEEeeecCccHHhH
Confidence 4444443 21 367888874433 489999986 5788875
No 419
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=71.79 E-value=5.2 Score=31.89 Aligned_cols=62 Identities=13% Similarity=0.178 Sum_probs=39.8
Q ss_pred eeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHHHhCCCcchHHHHHHHHhhh
Q psy16459 14 KCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFELCGFRFSLKTVLMIAQQLQ 88 (143)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~~~~~~~sL~tE~~v~~ql~ 88 (143)
+.|+.+++.+. .+++++++.... .+.+.+++||.. |.+|.+.... .+.++......++.++.
T Consensus 49 ~~E~~il~~l~---h~~iv~~~~~~~---------~~~~~~lv~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~ 111 (364)
T cd05599 49 RAERDILAEAD---NPWVVKLYYSFQ---------DENYLYLIMEYLPGGDMMTLLMK-KDTFTEEETRFYIAETI 111 (364)
T ss_pred HHHHHHHHhCC---CCCCcceEEEEE---------cCCeEEEEECCCCCcHHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 44677776652 567888877665 556679999987 5677766433 33455555555555544
No 420
>KOG0584|consensus
Probab=71.48 E-value=9.7 Score=33.77 Aligned_cols=101 Identities=18% Similarity=0.163 Sum_probs=67.7
Q ss_pred eEEEcc---ceeeccCCCCCCc--eeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecC--Ce
Q psy16459 33 RVYFFG---KVMDKTDKPSGGG--YQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCG--KY 105 (143)
Q Consensus 33 ~~~~fG---~vy~v~d~~~~~~--~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~--~~ 105 (143)
.+.+.| .||++.|..++-. ++.++.+=+..+-.++ ..+..|+.+++-|.. +.+-+++++=... +.
T Consensus 46 evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~l-------eR~~~Ev~lLKsL~H-~NIirfy~SW~d~~n~~ 117 (632)
T KOG0584|consen 46 EVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEEL-------ERLYSEVHLLKSLKH-PNIIRFYDSWVDTDNKT 117 (632)
T ss_pred hhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHH-------HHHHHHHHHHccCCC-CceeeeeeheecCCCce
Confidence 344444 4999999887764 5555555444443333 236779999887654 3566777665543 34
Q ss_pred eEEeecccCc-CHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 106 NALVMELLGP-SLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 106 ~~iVM~LlG~-sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
-.+|-||.-. +|..+++.. ++.+++.+-.-+.|+|+
T Consensus 118 in~iTEL~TSGtLr~Y~kk~-~~vn~kaik~W~RQILk 154 (632)
T KOG0584|consen 118 INFITELFTSGTLREYRKKH-RRVNIKAIKSWCRQILK 154 (632)
T ss_pred eeeeeecccCCcHHHHHHHh-ccCCHHHHHHHHHHHHH
Confidence 5667788754 899888875 88888888888888764
No 421
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=71.43 E-value=5.7 Score=30.84 Aligned_cols=46 Identities=11% Similarity=0.057 Sum_probs=32.0
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHH
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFE 69 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~ 69 (143)
+..|+++++.+ .+.+++++++++.. .+.+.+++||.. |.+|.+...
T Consensus 54 ~~~Ei~~l~~l--~~h~~iv~~~~~~~---------~~~~~~lv~e~~~~~~L~~~l~ 100 (303)
T cd05088 54 FAGELEVLCKL--GHHPNIINLLGACE---------HRGYLYLAIEYAPHGNLLDFLR 100 (303)
T ss_pred HHHHHHHHHHh--cCCCCcceEEEEEC---------CCCCceEEEEeCCCCcHHHHHH
Confidence 33466666666 34568999988876 455669999987 567777654
No 422
>KOG1152|consensus
Probab=70.92 E-value=2.6 Score=37.37 Aligned_cols=47 Identities=15% Similarity=0.268 Sum_probs=37.0
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHH
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFE 69 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~ 69 (143)
+-.||+||..+..+.-+-|-++..|=. +++|+++.+|.-|+-+ |++.
T Consensus 613 Vp~EIqIla~l~~~sH~NIlKlLdfFE---------ddd~yyl~te~hg~gI-DLFd 659 (772)
T KOG1152|consen 613 VPSEIQILATLNKHSHENILKLLDFFE---------DDDYYYLETEVHGEGI-DLFD 659 (772)
T ss_pred cchhHHHHHHhhhcCccchhhhhheee---------cCCeeEEEecCCCCCc-chhh
Confidence 446999999986666667888888877 7778899999999884 4544
No 423
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=70.80 E-value=11 Score=28.71 Aligned_cols=69 Identities=25% Similarity=0.168 Sum_probs=49.3
Q ss_pred ccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecc-cCc
Q psy16459 37 FGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMEL-LGP 115 (143)
Q Consensus 37 fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~L-lG~ 115 (143)
.|.||.+.-.+. .-|+|.- +....+.+++-|.+++..+.+....|+++.+|.. +++|+. .|+
T Consensus 35 ~s~Vyl~~~~~~---~~a~Kvr----------r~ds~r~~l~kEakiLeil~g~~~~p~vy~yg~~----~i~me~i~G~ 97 (201)
T COG2112 35 TSVVYLGEWRGG---EVALKVR----------RRDSPRRNLEKEAKILEILAGEGVTPEVYFYGED----FIRMEYIDGR 97 (201)
T ss_pred ccEEEEeeccCc---eEEEEEe----------cCCcchhhHHHHHHHHHHhhhcCCCceEEEechh----hhhhhhhcCc
Confidence 444665443222 3467664 3445678999999999999999899999999875 444875 478
Q ss_pred CHHHHHH
Q psy16459 116 SLEDLFD 122 (143)
Q Consensus 116 sL~~l~~ 122 (143)
+|.++..
T Consensus 98 ~L~~~~~ 104 (201)
T COG2112 98 PLGKLEI 104 (201)
T ss_pred chhhhhh
Confidence 9988755
No 424
>KOG1026|consensus
Probab=70.57 E-value=26 Score=31.98 Aligned_cols=64 Identities=17% Similarity=0.237 Sum_probs=50.2
Q ss_pred chHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccCc-CHHHHHHhc-CC--------C----CCHHHHHHHHHHH
Q psy16459 76 SLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLGP-SLEDLFDLC-NR--------K----FTLKTVLMIAIQL 140 (143)
Q Consensus 76 sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG~-sL~~l~~~~-~~--------~----fs~~T~~~ia~q~ 140 (143)
-.+.|+.++..+.. +++-++++.-..++..+||.|..-. +|.+..+.. ++ . .+..-.+.||.|+
T Consensus 535 dF~REaeLla~l~H-~nIVrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QI 612 (774)
T KOG1026|consen 535 DFRREAELLAELQH-PNIVRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQI 612 (774)
T ss_pred HHHHHHHHHHhccC-CCeEEEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHH
Confidence 45778888877755 4899999999999999999999985 898876654 22 2 6777788888885
No 425
>KOG1095|consensus
Probab=70.25 E-value=43 Score=31.68 Aligned_cols=96 Identities=15% Similarity=0.190 Sum_probs=58.7
Q ss_pred EccceeeccCCCCCCc-----eeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEee
Q psy16459 36 FFGKVMDKTDKPSGGG-----YQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVM 110 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~-----~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM 110 (143)
.||.||.+.-.+..+. + |+|-=--+.+.++.-. .-.|..++... .-+++-++++.--.....+|++
T Consensus 704 ~FG~VY~g~~~~~~~~~~~~~v-aiK~l~~~~~~~~~~~-------Fl~Ea~~m~~f-~HpNiv~liGv~l~~~~~~i~l 774 (1025)
T KOG1095|consen 704 AFGEVYEGTYSDVPGSVSPIQV-AVKSLKRLSSEQEVSD-------FLKEALLMSKF-DHPNIVSLIGVCLDSGPPLILL 774 (1025)
T ss_pred cccceEEEEEecCCCCccceEE-EEEeccccCCHHHHHH-------HHHHHHHHhcC-CCcceeeEEEeecCCCCcEEEe
Confidence 4999998765555554 3 3332111111221111 12233333222 2257888888888888899999
Q ss_pred ccc-CcCHHHHHHhc------CCCCCHHHHHHHHHHH
Q psy16459 111 ELL-GPSLEDLFDLC------NRKFTLKTVLMIAIQL 140 (143)
Q Consensus 111 ~Ll-G~sL~~l~~~~------~~~fs~~T~~~ia~q~ 140 (143)
|++ |-+|....+.. ....++...+.+|+++
T Consensus 775 eyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dv 811 (1025)
T KOG1095|consen 775 EYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDV 811 (1025)
T ss_pred hhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHH
Confidence 987 45888766655 5678899999999885
No 426
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=70.00 E-value=11 Score=28.02 Aligned_cols=63 Identities=11% Similarity=0.114 Sum_probs=39.3
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHHHhCCCcchHHHHHHHHhh
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFELCGFRFSLKTVLMIAQQL 87 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~~~~~~~sL~tE~~v~~ql 87 (143)
+..|+++++.+ +-+++++++++.. .+.+.+++||.. |.++.+.....+..........+..++
T Consensus 40 ~~~e~~~l~~l---~h~~i~~~~~~~~---------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi 103 (252)
T cd05084 40 FLQEARILKQY---SHPNIVRLIGVCT---------QKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENA 103 (252)
T ss_pred HHHHHHHHHhC---CCCCcceEEEEEc---------CCCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHH
Confidence 45577777766 3457888887765 445568999976 567777654333344555545555443
No 427
>KOG0611|consensus
Probab=69.78 E-value=5 Score=34.43 Aligned_cols=113 Identities=16% Similarity=0.104 Sum_probs=73.2
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCc
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKG 92 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~ 92 (143)
||-+|++...++.+- ||+|-++.+-..+... |+|.= .++-- +.-..-..+..|+.++..+. -+|
T Consensus 51 lkHRyE~~etLGkGT---------YGKVk~A~e~~sgR~V-AiKsI--rKdkI---kdeqDlvhIRREIeIMSsLN-HPh 114 (668)
T KOG0611|consen 51 LKHRYEITETLGKGT---------YGKVKLAYEHKSGREV-AIKSI--RKDKI---KDEQDLVHIRREIEIMSSLN-HPH 114 (668)
T ss_pred hhhHHHHHHHhcCCc---------ccceeehhhccCCcEe-ehhhh--hhhhc---ccHHHHHHHHHHHHHHhhcC-CCc
Confidence 566788887775533 8999888887777766 65431 11100 00001123566777776553 357
Q ss_pred ccEEEEeeecCCeeEEeecccCc-CHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 93 IPEVYYFGPCGKYNALVMELLGP-SLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 93 ~P~l~~~G~~~~~~~iVM~LlG~-sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+-++|..-...+--+||||.... .|-|+...+ +.+|-.-+-++-.|+.+
T Consensus 115 II~IyEVFENkdKIvivMEYaS~GeLYDYiSer-~~LsErEaRhfFRQIvS 164 (668)
T KOG0611|consen 115 IIQIYEVFENKDKIVIVMEYASGGELYDYISER-GSLSEREARHFFRQIVS 164 (668)
T ss_pred eeehhhhhcCCceEEEEEEecCCccHHHHHHHh-ccccHHHHHHHHHHHHH
Confidence 77777777777788999999764 788887665 77888777777777654
No 428
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=69.10 E-value=12 Score=28.27 Aligned_cols=64 Identities=20% Similarity=0.064 Sum_probs=37.6
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhh
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQ 88 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~ 88 (143)
|+.++..+ .+.+++++++++... +...+.++++|..+.++.+......+.+.......++.++.
T Consensus 47 e~~~l~~l--~~h~~i~~~~~~~~~-------~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~ 110 (282)
T cd07831 47 EIQALRRL--SPHPNILRLIEVLFD-------RKTGRLALVFELMDMNLYELIKGRKRPLPEKRVKSYMYQLL 110 (282)
T ss_pred HHHHHhhc--CCCCCccceEEEEec-------CCCCcEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHH
Confidence 44444444 445678888876541 11145599999998777766543333455555555555543
No 429
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=68.62 E-value=6 Score=30.18 Aligned_cols=67 Identities=19% Similarity=0.139 Sum_probs=40.3
Q ss_pred eeeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHHHhCCCcchHHHHHHHHhhh
Q psy16459 12 LLKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFELCGFRFSLKTVLMIAQQLQ 88 (143)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~~~~~~~sL~tE~~v~~ql~ 88 (143)
.+..|+++++.+. -+++++++++... .++.+.+++||.. |.+|.+................++.++.
T Consensus 52 ~~~~e~~~l~~l~---h~~i~~~~~~~~~-------~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~ 119 (284)
T cd05079 52 DLKKEIEILRNLY---HENIVKYKGICTE-------DGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQIC 119 (284)
T ss_pred HHHHHHHHHHhCC---CCCeeeeeeEEec-------CCCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHH
Confidence 3455777777663 2456666665441 1234458999988 8899887544333455555556655554
No 430
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=68.07 E-value=14 Score=25.57 Aligned_cols=64 Identities=19% Similarity=0.130 Sum_probs=43.2
Q ss_pred eeeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCC-CCHHHHHHHhCCCcchHHHHHHHHhh
Q psy16459 12 LLKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLG-PSLQDLFELCGFRFSLKTVLMIAQQL 87 (143)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg-~sl~~l~~~~~~~~sL~tE~~v~~ql 87 (143)
.+..|+.+++.+.. +++|+++.++. .....++++|..+ .++.+.........+...-..+..++
T Consensus 37 ~~~~e~~~~~~l~~---~~i~~~~~~~~---------~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l 101 (215)
T cd00180 37 ELLREIEILKKLNH---PNIVKLYGVFE---------DENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQI 101 (215)
T ss_pred HHHHHHHHHHhcCC---CCeeeEeeeee---------cCCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHH
Confidence 35567788877733 79999999887 4456699999998 88888765432234444444444444
No 431
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=67.76 E-value=13 Score=27.89 Aligned_cols=61 Identities=11% Similarity=0.106 Sum_probs=39.3
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHHHhCCCcchHHHHHHHHhhh
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFELCGFRFSLKTVLMIAQQLQ 88 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~~~~~~~sL~tE~~v~~ql~ 88 (143)
|+++++.+. .+++++++++.. .+...+++||.. |.+|.+........++......+..++.
T Consensus 55 e~~~l~~l~---h~~i~~~~~~~~---------~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~ 116 (266)
T cd05033 55 EASIMGQFD---HPNIIRLEGVVT---------KSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIA 116 (266)
T ss_pred HHHHHHhCC---CCCcceEeEEEe---------cCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHH
Confidence 666666552 357888877665 445568999977 6688887654444566666665555443
No 432
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=66.77 E-value=15 Score=28.92 Aligned_cols=60 Identities=8% Similarity=0.098 Sum_probs=37.2
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHHHhCCCcchHHHHHHHHhh
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFELCGFRFSLKTVLMIAQQL 87 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~~~~~~~sL~tE~~v~~ql 87 (143)
.|+++++.+ +.++++++++... .+.+.+++||.. |.+|.++.... +.+.......++.++
T Consensus 50 ~e~~~l~~~---~h~~iv~~~~~~~---------~~~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~~~~qi 110 (333)
T cd05600 50 TERDILTTT---KSEWLVKLLYAFQ---------DDEYLYLAMEYVPGGDFRTLLNNL-GVLSEDHARFYMAEM 110 (333)
T ss_pred HHHHHHHhC---CCCCCccEEEEEE---------cCCEEEEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHH
Confidence 466666555 3567888877655 556679999987 77888876432 234444444444443
No 433
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=66.74 E-value=19 Score=27.35 Aligned_cols=52 Identities=17% Similarity=0.036 Sum_probs=34.8
Q ss_pred CCCCceEEEccceeeccCCCCCCceeEEEEecCC-CCHHHHHHHhCCCcchHHHHHHHHhhh
Q psy16459 28 PHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLG-PSLQDLFELCGFRFSLKTVLMIAQQLQ 88 (143)
Q Consensus 28 ~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg-~sl~~l~~~~~~~~sL~tE~~v~~ql~ 88 (143)
.++++++++++. .+.+.+++||.+. .+|.+......+.........++.++.
T Consensus 75 h~niv~~~~~~~---------~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~ 127 (274)
T cd05076 75 HIHLAFVHGVCV---------RGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLA 127 (274)
T ss_pred CCCeeeEEEEEE---------eCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 468889988876 5566789999775 456555444344566666666666654
No 434
>KOG0663|consensus
Probab=66.58 E-value=2.9 Score=34.74 Aligned_cols=91 Identities=24% Similarity=0.231 Sum_probs=57.0
Q ss_pred CceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcC-----------------------CcccEEEEeeecC---
Q psy16459 50 GGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSN-----------------------KGIPEVYYFGPCG--- 103 (143)
Q Consensus 50 ~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~-----------------------~~~P~l~~~G~~~--- 103 (143)
++. |||||.+-.+|..+....+++|+..-.-.+..|++.. .|+-++-++|--.
T Consensus 150 d~i-y~VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~yg 228 (419)
T KOG0663|consen 150 DKI-YIVMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYG 228 (419)
T ss_pred cee-eeeHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhc
Confidence 345 9999999999999988888899887777777776543 3456666666432
Q ss_pred ----CeeEEeecccCcCHHHHHHhc--CCCCCHHHHHHHHHHHh
Q psy16459 104 ----KYNALVMELLGPSLEDLFDLC--NRKFTLKTVLMIAIQLE 141 (143)
Q Consensus 104 ----~~~~iVM~LlG~sL~~l~~~~--~~~fs~~T~~~ia~q~l 141 (143)
.+.=+|.+|--.+-+=|...- .....+.++-+|..++|
T Consensus 229 sp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l 272 (419)
T KOG0663|consen 229 SPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELL 272 (419)
T ss_pred CCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHH
Confidence 244555555555544443321 33444555555555544
No 435
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=66.29 E-value=7.5 Score=29.34 Aligned_cols=63 Identities=14% Similarity=0.167 Sum_probs=38.2
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHHHhCCCcchHHHHHHHHh
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFELCGFRFSLKTVLMIAQQ 86 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~~~~~~~sL~tE~~v~~q 86 (143)
+..|+.+++.+...+.+++.+++++.. .+.+.+++||.. |.+|.++... +.........++.+
T Consensus 46 ~~~e~~~l~~l~~~~~~~vi~~~~~~~---------~~~~~~lv~e~~~~~~L~~~~~~--~~l~~~~~~~i~~~ 109 (277)
T cd06917 46 IQREVALLSQLRQSQPPNITKYYGSYL---------KGPRLWIIMEYAEGGSVRTLMKA--GPIAEKYISVIIRE 109 (277)
T ss_pred HHHHHHHHHHhccCCCCCeeeEeeeee---------eCCEEEEEEecCCCCcHHHHHHc--cCCCHHHHHHHHHH
Confidence 445777777775445667777776543 444568999977 6788776532 23444444444443
No 436
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=65.91 E-value=14 Score=27.51 Aligned_cols=62 Identities=10% Similarity=0.009 Sum_probs=39.0
Q ss_pred eeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHHHhCCCcchHHHHHHHHhh
Q psy16459 14 KCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFELCGFRFSLKTVLMIAQQL 87 (143)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~~~~~~~sL~tE~~v~~ql 87 (143)
..|+.+++.+. .+++.+++++.. .+...+++||.. |.+|.+........++......++.++
T Consensus 47 ~~e~~~l~~l~---h~~i~~~~~~~~---------~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i 109 (256)
T cd05114 47 IEEAKVMMKLS---HPKLVQLYGVCT---------QQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDV 109 (256)
T ss_pred HHHHHHHHHCC---CCCceeEEEEEc---------cCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHH
Confidence 34777777763 357888887765 444558999988 577877654333345555555555544
No 437
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=65.76 E-value=27 Score=27.52 Aligned_cols=61 Identities=10% Similarity=0.008 Sum_probs=38.1
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHHHhCCCcchHHHHHHHHhh
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFELCGFRFSLKTVLMIAQQL 87 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~~~~~~~sL~tE~~v~~ql 87 (143)
.|..+++.+ +.++++.++++.. .+.+.+++||.+ |.+|.++.......++......+..++
T Consensus 50 ~e~~~l~~~---~~~~i~~~~~~~~---------~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi 111 (331)
T cd05597 50 EERDVLVNG---DRRWITNLHYAFQ---------DENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEM 111 (331)
T ss_pred HHHHHHHhC---CCCCCCceEEEEe---------cCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 344444333 4567888877655 455669999975 778887765544455555555555544
No 438
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=65.48 E-value=9.4 Score=30.84 Aligned_cols=61 Identities=10% Similarity=0.087 Sum_probs=37.6
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHHHhCCCcchHHHHHHHHh
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFELCGFRFSLKTVLMIAQQ 86 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~~~~~~~sL~tE~~v~~q 86 (143)
++.|+.+++.+ +.+++++++++.. .+.+.+++||.+ |.+|.++.... +.+.......++.+
T Consensus 48 ~~~E~~il~~l---~h~~iv~l~~~~~---------~~~~~~lv~E~~~gg~L~~~l~~~-~~~~e~~~~~~~~q 109 (381)
T cd05626 48 VKAERDILAEA---DNEWVVKLYYSFQ---------DKDNLYFVMDYIPGGDMMSLLIRM-EVFPEVLARFYIAE 109 (381)
T ss_pred HHHHHHHHHhc---CCCCeeeeEEEEe---------cCCEEEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHH
Confidence 45577777665 3457888887765 555669999987 66887765432 23443333333333
No 439
>PHA03209 serine/threonine kinase US3; Provisional
Probab=65.36 E-value=9.2 Score=30.64 Aligned_cols=61 Identities=15% Similarity=0.104 Sum_probs=42.1
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhh
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQ 88 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~ 88 (143)
|+.+++.+. -+++++++++.. .+.+.++++|....++.+......+.++......++.++.
T Consensus 107 E~~~l~~l~---h~~iv~~~~~~~---------~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~ 167 (357)
T PHA03209 107 EAMLLQNVN---HPSVIRMKDTLV---------SGAITCMVLPHYSSDLYTYLTKRSRPLPIDQALIIEKQIL 167 (357)
T ss_pred HHHHHHhCC---CCCCcChhheEE---------eCCeeEEEEEccCCcHHHHHHhccCCCCHHHHHHHHHHHH
Confidence 666666552 357888877655 4556689999998888877655555677776666666653
No 440
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=64.67 E-value=12 Score=28.21 Aligned_cols=62 Identities=8% Similarity=0.076 Sum_probs=39.4
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCC-CCHHHHHHHhCCCcchHHHHHHHHhhh
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLG-PSLQDLFELCGFRFSLKTVLMIAQQLQ 88 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg-~sl~~l~~~~~~~~sL~tE~~v~~ql~ 88 (143)
.|+.+++.+. .+++++++++.. .+...++++|... .+|.+......+.++......++.++.
T Consensus 54 ~e~~~l~~l~---h~ni~~~~~~~~---------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~ 116 (269)
T cd05065 54 SEASIMGQFD---HPNIIHLEGVVT---------KSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIA 116 (269)
T ss_pred HHHHHHHhCC---CcCcceEEEEEC---------CCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHH
Confidence 3555665552 456778877655 4455589999874 478777655455666666666665543
No 441
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=64.01 E-value=8.3 Score=28.23 Aligned_cols=66 Identities=15% Similarity=0.210 Sum_probs=42.8
Q ss_pred cceeeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCC--ceeEEEEecC-CCCHHHHHHHhCCCcchHHHHHHHHh
Q psy16459 10 MSLLKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGG--GYQALVLSLL-GPSLQDLFELCGFRFSLKTVLMIAQQ 86 (143)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~--~~~a~~~Ell-g~sl~~l~~~~~~~~sL~tE~~v~~q 86 (143)
...++.|+++++.+. .+++++++.+.. .. ...++++|.. |.++.+...... .++......++.+
T Consensus 43 ~~~~~~e~~~l~~l~---~~~i~~~~~~~~---------~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~ 109 (260)
T cd06606 43 LEALEREIRILSSLQ---HPNIVRYYGSER---------DEEKNTLNIFLEYVSGGSLSSLLKKFG-KLPEPVIRKYTRQ 109 (260)
T ss_pred HHHHHHHHHHHHHcC---CCCEeeEEEEEe---------cCCCCeEEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHH
Confidence 445666777777774 456777776665 33 4558999999 888888765433 5555555555555
Q ss_pred hh
Q psy16459 87 LQ 88 (143)
Q Consensus 87 l~ 88 (143)
+.
T Consensus 110 l~ 111 (260)
T cd06606 110 IL 111 (260)
T ss_pred HH
Confidence 43
No 442
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=63.88 E-value=5.3 Score=29.98 Aligned_cols=65 Identities=12% Similarity=0.050 Sum_probs=43.9
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHHHhCCCcchHHHHHHHHhhhc
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFELCGFRFSLKTVLMIAQQLQS 89 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~~~~~~~sL~tE~~v~~ql~~ 89 (143)
+..|.++++.+ .+.+++++++++.. ++...+++||.. |.+|.+..... +.++......++.++..
T Consensus 48 ~~~e~~~~~~l--~~~~~i~~~~~~~~---------~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~ql~~ 113 (280)
T cd05581 48 VKIEKEVLTRL--NGHPGIIKLYYTFQ---------DEENLYFVLEYAPNGELLQYIRKY-GSLDEKCTRFYAAEILL 113 (280)
T ss_pred HHHHHHHHHhc--ccCCCchhHHHHhc---------CCceEEEEEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHH
Confidence 44566676666 34667888776654 445568999999 99998876543 35667777776666544
No 443
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=63.71 E-value=12 Score=30.05 Aligned_cols=46 Identities=11% Similarity=0.156 Sum_probs=30.7
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHHH
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFEL 70 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~~ 70 (143)
++.|+.+++.+ +.+++++++.... .+.+.+++||.+ |.+|.++...
T Consensus 48 ~~~E~~il~~l---~h~~iv~~~~~~~---------~~~~~~lv~E~~~~g~L~~~i~~ 94 (376)
T cd05598 48 VKAERDILAEA---DNEWVVKLYYSFQ---------DKDNLYFVMDYIPGGDMMSLLIR 94 (376)
T ss_pred HHHHHHHHHhC---CCCCcceEEEEEE---------cCCEEEEEEeCCCCCcHHHHHHh
Confidence 44577777665 3356777776544 445669999987 6788877543
No 444
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=63.63 E-value=14 Score=29.00 Aligned_cols=60 Identities=10% Similarity=0.080 Sum_probs=35.9
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHHHhCCCcchHHHHHHHHhh
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFELCGFRFSLKTVLMIAQQL 87 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~~~~~~~sL~tE~~v~~ql 87 (143)
|..+++.. ...+.+++++.+.. .+.+.+++||.+ |.+|.+..... ..++......++.++
T Consensus 50 e~~~l~~~--~~~~~i~~~~~~~~---------~~~~~~lv~Ey~~~g~L~~~i~~~-~~l~~~~~~~i~~qi 110 (323)
T cd05615 50 EKRVLALQ--DKPPFLTQLHSCFQ---------TVDRLYFVMEYVNGGDLMYHIQQV-GKFKEPQAVFYAAEI 110 (323)
T ss_pred HHHHHHhc--cCCCchhheeeEEe---------cCCEEEEEEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHH
Confidence 44444333 34567777776655 445569999987 56777664332 345566666555554
No 445
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=63.41 E-value=6.6 Score=29.79 Aligned_cols=63 Identities=17% Similarity=0.144 Sum_probs=41.0
Q ss_pred eeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhh
Q psy16459 14 KCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQ 88 (143)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~ 88 (143)
..|+++++.+. .+++++++++.. ++.+.++++|..+.++.+.........+......++.++.
T Consensus 47 ~~ei~~l~~l~---h~~i~~~~~~~~---------~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~ 109 (284)
T cd07839 47 LREICLLKELK---HKNIVRLYDVLH---------SDKKLTLVFEYCDQDLKKYFDSCNGDIDPEIVKSFMFQLL 109 (284)
T ss_pred hHHHHHHHhcC---CCCeeeHHHHhc---------cCCceEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 34666666662 346666666544 4455699999999888877655455566666666666654
No 446
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=63.25 E-value=31 Score=28.81 Aligned_cols=58 Identities=12% Similarity=-0.011 Sum_probs=38.3
Q ss_pred HHHHHHHHhhhc--CCcccEEEEeeecCCeeEEeecccCcCHHHHHHhc-CCCCCHHHHHHHHH
Q psy16459 78 KTVLMIAQQLQS--NKGIPEVYYFGPCGKYNALVMELLGPSLEDLFDLC-NRKFTLKTVLMIAI 138 (143)
Q Consensus 78 ~tE~~v~~ql~~--~~~~P~l~~~G~~~~~~~iVM~LlG~sL~~l~~~~-~~~fs~~T~~~ia~ 138 (143)
..|...+..... ...+|+++.+- +..+.+|||-|++ ...+|..+ .++-....+..+|.
T Consensus 47 ~~E~~~L~~~~~~~P~~vP~vy~~D--~e~~~~vMEdL~~-~~ilR~~Li~g~~~p~~A~~iG~ 107 (370)
T TIGR01767 47 RIESSALIRQGEHVPHLVPRIFHFD--TEMAVTVMEDLSH-HKIARKGLIEGENYPHLARHIGE 107 (370)
T ss_pred HHHHHHHHHhhccCccccCeEEEEc--cccceehHhhCcc-chHHHHHHHcCCCChHHHHHHHH
Confidence 456666655544 23789988774 4458899999998 66777776 55444555555553
No 447
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=63.22 E-value=14 Score=27.91 Aligned_cols=63 Identities=17% Similarity=0.084 Sum_probs=41.1
Q ss_pred eeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhC--CCcchHHHHHHHHhhh
Q psy16459 14 KCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCG--FRFSLKTVLMIAQQLQ 88 (143)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~--~~~sL~tE~~v~~ql~ 88 (143)
..|+++++.+. .+++++++++.. .+.+.++++|....++.+...... ..+.......++.++.
T Consensus 46 ~~E~~~l~~l~---h~~i~~~~~~~~---------~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~ 110 (284)
T cd07836 46 IREISLMKELK---HENIVRLHDVIH---------TENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLL 110 (284)
T ss_pred HHHHHHHHhhc---CCCEeeeeeeEe---------eCCcEEEEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHH
Confidence 34777777762 357888888776 445569999999988877654332 3455555555555543
No 448
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=63.11 E-value=32 Score=27.06 Aligned_cols=51 Identities=14% Similarity=0.113 Sum_probs=33.0
Q ss_pred CCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHHHhCCCcchHHHHHHHHh
Q psy16459 27 PPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFELCGFRFSLKTVLMIAQQ 86 (143)
Q Consensus 27 ~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~~~~~~~sL~tE~~v~~q 86 (143)
+.+++++++.+.. .+.+.+++||.. |.+|.++.......+.......++.+
T Consensus 59 ~~~~i~~l~~~~~---------~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~q 110 (331)
T cd05624 59 DCQWITTLHYAFQ---------DENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAE 110 (331)
T ss_pred CCCCEeeEEEEEE---------cCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHH
Confidence 3456777777665 566779999975 78888876654445554444444443
No 449
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=62.86 E-value=15 Score=28.37 Aligned_cols=63 Identities=19% Similarity=0.175 Sum_probs=40.7
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEec-CCCCHHHHHHHh-CCCcchHHHHHHHHhh
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSL-LGPSLQDLFELC-GFRFSLKTVLMIAQQL 87 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~El-lg~sl~~l~~~~-~~~~sL~tE~~v~~ql 87 (143)
+..|+++++.++ .+++++++++.. .+.+.++++|. .|.+|.++.... +..+.......++.++
T Consensus 48 ~~~e~~~l~~l~---~~~i~~~~~~~~---------~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi 112 (316)
T cd05574 48 VLTEQEILATLD---HPFLPTLYASFQ---------TETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEV 112 (316)
T ss_pred HHHHHHHHHhCC---CCCchhheeeee---------cCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHH
Confidence 445777777764 468888887766 55667999995 477998876532 3345544444444443
No 450
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=62.67 E-value=23 Score=27.68 Aligned_cols=63 Identities=13% Similarity=0.139 Sum_probs=39.2
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHHHhCCCcchHHHHHHHHhh
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFELCGFRFSLKTVLMIAQQL 87 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~~~~~~~sL~tE~~v~~ql 87 (143)
++.|+.+++.+ +.+++++++++.. .+.+.+++||.. |.+|.++.......+.......++.++
T Consensus 48 ~~~e~~i~~~~---~~~~i~~~~~~~~---------~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi 111 (330)
T cd05601 48 FEEERDILSIS---NSPWIPQLQYAFQ---------DKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAEL 111 (330)
T ss_pred HHHHHHHHHhC---CCCCCcceeeEEe---------cCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 34455555443 4567777766544 445569999987 788888766554455555555555444
No 451
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=62.37 E-value=17 Score=28.51 Aligned_cols=53 Identities=13% Similarity=0.023 Sum_probs=34.3
Q ss_pred CCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHHHhCCCcchHHHHHHHHhhh
Q psy16459 26 PPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFELCGFRFSLKTVLMIAQQLQ 88 (143)
Q Consensus 26 ~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~~~~~~~sL~tE~~v~~ql~ 88 (143)
.+.+++++++.... .+.+.+++||.. |.+|.+..... +.+.......++.++.
T Consensus 53 ~~hp~i~~~~~~~~---------~~~~~~lv~e~~~gg~L~~~~~~~-~~~~~~~~~~~~~qi~ 106 (316)
T cd05592 53 WEHPFLTHLFCTFQ---------TKEHLFFVMEYLNGGDLMFHIQSS-GRFDEARARFYAAEII 106 (316)
T ss_pred cCCCCccceeeEEE---------cCCEEEEEEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHH
Confidence 35568888876655 455669999987 67777665433 3566666666655553
No 452
>KOG0615|consensus
Probab=62.26 E-value=3.1 Score=35.32 Aligned_cols=38 Identities=11% Similarity=0.036 Sum_probs=28.4
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCC
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGP 62 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~ 62 (143)
+..|++||+++.- +++-+++.|=. ..++.|||||.++.
T Consensus 223 v~~EieILkkL~H---P~IV~~~d~f~---------~~ds~YmVlE~v~G 260 (475)
T KOG0615|consen 223 VQNEIEILKKLSH---PNIVRIKDFFE---------VPDSSYMVLEYVEG 260 (475)
T ss_pred hHHHHHHHHhcCC---CCEEEEeeeee---------cCCceEEEEEEecC
Confidence 5679999998832 46777777755 56677999998743
No 453
>PHA03211 serine/threonine kinase US3; Provisional
Probab=62.11 E-value=16 Score=30.94 Aligned_cols=63 Identities=21% Similarity=0.095 Sum_probs=44.2
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhc
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQS 89 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~ 89 (143)
.|+.+++.+. -+++.++++++. .+.+.++++|..+.++.+......+.++......++.++..
T Consensus 209 ~E~~iL~~L~---HpnIv~l~~~~~---------~~~~~~lv~e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~ 271 (461)
T PHA03211 209 HEARLLRRLS---HPAVLALLDVRV---------VGGLTCLVLPKYRSDLYTYLGARLRPLGLAQVTAVARQLLS 271 (461)
T ss_pred HHHHHHHHCC---CCCCCcEEEEEE---------ECCEEEEEEEccCCCHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 4777777763 357888888766 45566899999888887765544456777777777777643
No 454
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=61.77 E-value=14 Score=26.92 Aligned_cols=65 Identities=11% Similarity=0.065 Sum_probs=42.0
Q ss_pred eeeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCC-CCHHHHHHHhCCCcchHHHHHHHHhhh
Q psy16459 12 LLKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLG-PSLQDLFELCGFRFSLKTVLMIAQQLQ 88 (143)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg-~sl~~l~~~~~~~~sL~tE~~v~~ql~ 88 (143)
.+..|+++++.+. .+++++++.+.. .+...++++|..+ .+|.+......+.+.......+..++.
T Consensus 43 ~~~~e~~~l~~l~---~~~i~~~~~~~~---------~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~ 108 (253)
T cd05122 43 KIINEIQILKKCK---HPNIVKYYGSYL---------KKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELL 108 (253)
T ss_pred HHHHHHHHHHhCC---CCCEeEEEEEEe---------cCCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHH
Confidence 3455677776663 567888887765 4455588999887 888887654434555555555555543
No 455
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=61.59 E-value=9 Score=28.98 Aligned_cols=63 Identities=14% Similarity=0.002 Sum_probs=38.2
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhh
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQL 87 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql 87 (143)
+..|+++++.+. .+++++++++.. .+.+.++++|..+.++.+................++.++
T Consensus 47 ~~~e~~~l~~l~---~~~i~~~~~~~~---------~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i 109 (288)
T cd07833 47 ALREVKVLRQLR---HENIVNLKEAFR---------RKGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQL 109 (288)
T ss_pred HHHHHHHHHhcC---CCCeeehhheEE---------ECCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHH
Confidence 445777777774 346667666654 345569999999887766544333345444444444443
No 456
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=61.54 E-value=13 Score=27.98 Aligned_cols=62 Identities=19% Similarity=0.271 Sum_probs=37.5
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHHHhCCCcchHHHHHHHHhh
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFELCGFRFSLKTVLMIAQQL 87 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~~~~~~~sL~tE~~v~~ql 87 (143)
++.|+++++.++ .+++++++++.. .+.+.++++|.. |.+|.+.....+ .+.......++.++
T Consensus 55 ~~~e~~~l~~l~---h~~i~~~~~~~~---------~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi 117 (272)
T cd06629 55 LRSEIETLKDLD---HLNIVQYLGFET---------TEEYLSIFLEYVPGGSIGSCLRTYG-RFEEQLVRFFTEQV 117 (272)
T ss_pred HHHHHHHHHhcC---CCCcceEEEEec---------cCCceEEEEecCCCCcHHHHHhhcc-CCCHHHHHHHHHHH
Confidence 455777776663 357888887765 455668999976 677877654332 34333333333333
No 457
>KOG0595|consensus
Probab=61.53 E-value=17 Score=30.72 Aligned_cols=121 Identities=19% Similarity=0.172 Sum_probs=70.1
Q ss_pred cceeeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCC-CCHHHHHHHhCCCcchHHHHHHHHhhh
Q psy16459 10 MSLLKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLG-PSLQDLFELCGFRFSLKTVLMIAQQLQ 88 (143)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg-~sl~~l~~~~~~~~sL~tE~~v~~ql~ 88 (143)
..+|--||.||+.+.- +++-++++|=. .+++-++|||... .+|.+.....+ +..-.+.-.++.|+.
T Consensus 53 ~e~L~~Ei~iLkel~H---~nIV~l~d~~~---------~~~~i~lVMEyC~gGDLs~yi~~~~-~l~e~t~r~Fm~QLA 119 (429)
T KOG0595|consen 53 VELLLSEIKILKELKH---PNIVRLLDCIE---------DDDFIYLVMEYCNGGDLSDYIRRRG-RLPEATARHFMQQLA 119 (429)
T ss_pred HHHHHHHHHHHHhcCC---cceeeEEEEEe---------cCCeEEEEEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHH
Confidence 3344559999999963 45555555544 4556799999986 78887754332 444555555666654
Q ss_pred cC------Ccc------cEEEEeeec-----------------C--CeeEEeecccCcCHH---HHHHh-c-CCCCCHHH
Q psy16459 89 SN------KGI------PEVYYFGPC-----------------G--KYNALVMELLGPSLE---DLFDL-C-NRKFTLKT 132 (143)
Q Consensus 89 ~~------~~~------P~l~~~G~~-----------------~--~~~~iVM~LlG~sL~---~l~~~-~-~~~fs~~T 132 (143)
.. .++ |+++-.-.. . ....+.=+|+|..|- ++.+. . .-+=.+.+
T Consensus 120 ~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWS 199 (429)
T KOG0595|consen 120 SALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWS 199 (429)
T ss_pred HHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHH
Confidence 32 121 544443332 1 234455567776654 33322 2 44556666
Q ss_pred HHHHHHHHhcC
Q psy16459 133 VLMIAIQLEGK 143 (143)
Q Consensus 133 ~~~ia~q~l~r 143 (143)
+-.|.+||+++
T Consensus 200 iG~Ilyq~l~g 210 (429)
T KOG0595|consen 200 IGTILYQCLTG 210 (429)
T ss_pred HHHHHHHHHhC
Confidence 66677888764
No 458
>PLN02756 S-methyl-5-thioribose kinase
Probab=61.35 E-value=67 Score=27.26 Aligned_cols=95 Identities=13% Similarity=-0.038 Sum_probs=50.9
Q ss_pred eeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhc--CCcccEEEEeeecCCeeEEeecccCcCH
Q psy16459 40 VMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQS--NKGIPEVYYFGPCGKYNALVMELLGPSL 117 (143)
Q Consensus 40 vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~--~~~~P~l~~~G~~~~~~~iVM~LlG~sL 117 (143)
||.|.+. ++.+ ++|.-+.+.-...- ...-.......|...+..+.. ...+|+++.++.. ..++|||-+.++.
T Consensus 48 VyrV~~~--~~sv-VVKqa~p~~r~vga-~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~ded--~~vlvME~L~~~~ 121 (418)
T PLN02756 48 VYIVVSS--SGSF-VIKQALPYIRCIGE-SWPMTKERAYFEATALREHGRLCPDHVPEVYHFDRT--MALIGMRYLEPPH 121 (418)
T ss_pred EEEEEcC--CccE-EEEeCCccccCCCc-cccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECCC--CCEEEEeecCCcc
Confidence 7888763 3345 78887622110000 000001112334444433322 2489999999884 4899999997765
Q ss_pred HHHHHhc-CCCCCHHHHHHHHHHH
Q psy16459 118 EDLFDLC-NRKFTLKTVLMIAIQL 140 (143)
Q Consensus 118 ~~l~~~~-~~~fs~~T~~~ia~q~ 140 (143)
.-+|... .+.-.+...-+++..+
T Consensus 122 ~ilr~~Ll~G~~~p~~a~~ig~~l 145 (418)
T PLN02756 122 IILRKGLIAGIEYPLLAEHMSDYM 145 (418)
T ss_pred eehhhhhccCCCCHHHHHHHHHHH
Confidence 4556655 4443356666665543
No 459
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=61.32 E-value=11 Score=28.02 Aligned_cols=64 Identities=14% Similarity=0.135 Sum_probs=41.2
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHHHh-CCCcchHHHHHHHHhhh
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFELC-GFRFSLKTVLMIAQQLQ 88 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~~~-~~~~sL~tE~~v~~ql~ 88 (143)
+..|+++++.+. .+++++++.+.. .+.+.+++||.. |.+|.+..... +..++......++.++.
T Consensus 48 ~~~e~~~l~~l~---h~~i~~~~~~~~---------~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~ 113 (261)
T cd05034 48 FLQEAQIMKKLR---HDKLVQLYAVCS---------EEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIA 113 (261)
T ss_pred HHHHHHHHhhCC---CCCEeeeeeeee---------cCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHH
Confidence 345777777663 457888887765 444558999976 56787765433 34566666666666553
No 460
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=61.19 E-value=16 Score=27.19 Aligned_cols=60 Identities=25% Similarity=0.316 Sum_probs=41.6
Q ss_pred HHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccCc-CHHHHHHhc--CCCCCHHHHHHHHHHHhc
Q psy16459 79 TVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLGP-SLEDLFDLC--NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 79 tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG~-sL~~l~~~~--~~~fs~~T~~~ia~q~l~ 142 (143)
.|.-++..+.+..+||+++++ .+ +++|.|.++. ++....... ....+...-++||++.|+
T Consensus 8 ~E~lll~~l~~~~~~pk~lG~--CG--~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~ 70 (188)
T PF12260_consen 8 NEPLLLQLLQGSEPFPKLLGS--CG--RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLE 70 (188)
T ss_pred cHHHHHHHcCCCCCCCCeeeE--CC--CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHH
Confidence 477788888888899999876 23 4778999996 454332111 234577888899998764
No 461
>KOG1151|consensus
Probab=61.04 E-value=11 Score=32.85 Aligned_cols=125 Identities=17% Similarity=0.145 Sum_probs=80.4
Q ss_pred ccccccceeeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHH
Q psy16459 5 STLTSMSLLKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIA 84 (143)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~ 84 (143)
|-+..-.+|.-++-+|-+++.+| |..||++-|..-+. |.|.|+--+.++-.+-.+..- ...--.|.++-
T Consensus 453 SQFkDHptLn~RYLlLhLLGrGG---------FSEVyKAFDl~EqR-YvAvKIHqlNK~WrdEKKeNY-hKHAcREyrIH 521 (775)
T KOG1151|consen 453 SQFKDHPTLNDRYLLLHLLGRGG---------FSEVYKAFDLTEQR-YVAVKIHQLNKNWRDEKKENY-HKHACREYRIH 521 (775)
T ss_pred hhhccCcchHHHHHHHHHhcccc---------HHHHHHhcccchhh-eeeEeeehhccchhhHhhhhH-HHHHHHHHhhh
Confidence 34455556666777777776665 99999999887665 559999988877665433221 11223455555
Q ss_pred HhhhcCCcccEEEEeeecC-CeeEEeeccc-CcCHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 85 QQLQSNKGIPEVYYFGPCG-KYNALVMELL-GPSLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 85 ~ql~~~~~~P~l~~~G~~~-~~~~iVM~Ll-G~sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+.+-. +.+.++|++-.-+ .-.+-|.|.+ |-+|.-+.+. ++-+|-+-+-.|..|++.
T Consensus 522 KeLDH-pRIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQ-hklmSEKEARSIiMQiVn 579 (775)
T KOG1151|consen 522 KELDH-PRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQ-HKLMSEKEARSIIMQIVN 579 (775)
T ss_pred hccCc-ceeeeeeeeeeeccccceeeeeecCCCchhHHHHh-hhhhhHHHHHHHHHHHHH
Confidence 54433 3466777776654 3445578877 5677665554 477888888888777653
No 462
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=60.85 E-value=15 Score=27.58 Aligned_cols=69 Identities=13% Similarity=0.051 Sum_probs=41.9
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhC-CCcchHHHHHHHHhh
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCG-FRFSLKTVLMIAQQL 87 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~-~~~sL~tE~~v~~ql 87 (143)
.|+.+++.+.....+++++++++.... +.. +....++++|....++.+...... ..+.......++.++
T Consensus 47 ~e~~~l~~l~~~~h~~i~~~~~~~~~~---~~~-~~~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i 116 (287)
T cd07838 47 REIALLKQLESFEHPNIVRLLDVCHGP---RTD-RELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQL 116 (287)
T ss_pred HHHHHHHHhhccCCCCcceEEEEEeec---cCC-CCceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHH
Confidence 366667666544567888888776521 111 122358999999888887655432 245555555555554
No 463
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=60.81 E-value=14 Score=27.35 Aligned_cols=65 Identities=12% Similarity=0.080 Sum_probs=38.8
Q ss_pred eeeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCC-CCHHHHHHHhCCCcchHHHHHHHHhhh
Q psy16459 12 LLKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLG-PSLQDLFELCGFRFSLKTVLMIAQQLQ 88 (143)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg-~sl~~l~~~~~~~~sL~tE~~v~~ql~ 88 (143)
.+..|+++++.+ +.+++.+++++.. .+.+.+++||..+ .++.++.......++......+..++.
T Consensus 46 ~~~~e~~~l~~~---~h~~i~~~~~~~~---------~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~ 111 (262)
T cd06613 46 IIQQEISMLKEC---RHPNIVAYFGSYL---------RRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETL 111 (262)
T ss_pred HHHHHHHHHHhC---CCCChhceEEEEE---------eCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHH
Confidence 345567777666 3356777766554 4445589999876 477776554434555555555555443
No 464
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=60.76 E-value=7.5 Score=29.26 Aligned_cols=62 Identities=15% Similarity=-0.019 Sum_probs=40.8
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhh
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQ 88 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~ 88 (143)
.|+.+++.+. .+++++++++.. .+.+.++++|..+.++.+........++......++.++.
T Consensus 47 ~e~~~l~~~~---~~~i~~~~~~~~---------~~~~~~~v~e~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~ 108 (282)
T cd07829 47 REISLLKELK---HPNIVKLLDVIH---------TERKLYLVFEYCDMDLKKYLDKRPGPLSPNLIKSIMYQLL 108 (282)
T ss_pred HHHHHHHhcC---CCCHHHHHhhhh---------cCCceEEEecCcCcCHHHHHHhhccCCCHHHHHHHHHHHH
Confidence 3566666553 567777777765 4456699999999888887655433566666556555543
No 465
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=60.58 E-value=20 Score=28.02 Aligned_cols=60 Identities=10% Similarity=0.042 Sum_probs=34.4
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHHHhCCCcchHHHHHHHHhh
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFELCGFRFSLKTVLMIAQQL 87 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~~~~~~~sL~tE~~v~~ql 87 (143)
|..+++.+ ...+.++.++.+.. .+.+.+++||.+ |.+|.+.... ...+.......++.++
T Consensus 50 e~~~l~~~--~~~~~i~~~~~~~~---------~~~~~~lv~E~~~~g~L~~~~~~-~~~~~~~~~~~~~~qi 110 (324)
T cd05587 50 EKRVLALP--GKPPFLTQLHSCFQ---------TMDRLYFVMEYVNGGDLMYHIQQ-VGKFKEPHAVFYAAEI 110 (324)
T ss_pred HHHHHHhc--CCCCceeeeEEEEE---------cCCEEEEEEcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHH
Confidence 44444444 34456777776655 445569999986 5677665433 2345555555554443
No 466
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=59.70 E-value=13 Score=29.33 Aligned_cols=63 Identities=14% Similarity=0.133 Sum_probs=39.3
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHHHhCCCcchHHHHHHHHhhh
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFELCGFRFSLKTVLMIAQQLQ 88 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~~~~~~~sL~tE~~v~~ql~ 88 (143)
+..|+.+++.+ ..+++++++.... .+.+.+++||.. |.+|.+..... +.+.......++.++.
T Consensus 48 ~~~e~~~l~~~---~~~~i~~~~~~~~---------~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~ 111 (350)
T cd05573 48 VRAERDILADA---DSPWIVKLYYSFQ---------DEEHLYLVMEYMPGGDLMNLLIRK-DVFPEETARFYIAELV 111 (350)
T ss_pred HHHHHHHHHhc---CCCCccchhhhee---------cCCeEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHH
Confidence 33455566554 3567777776554 455669999987 67888776543 3555555555555544
No 467
>PRK10593 hypothetical protein; Provisional
Probab=59.64 E-value=40 Score=26.72 Aligned_cols=39 Identities=18% Similarity=0.130 Sum_probs=31.2
Q ss_pred chHHHHHHHHhhhcC--CcccEEEEeeec---CCeeEEeecccC
Q psy16459 76 SLKTVLMIAQQLQSN--KGIPEVYYFGPC---GKYNALVMELLG 114 (143)
Q Consensus 76 sL~tE~~v~~ql~~~--~~~P~l~~~G~~---~~~~~iVM~LlG 114 (143)
.+..|...+..+... ..+|+++..|.. ....|+|||.+.
T Consensus 53 ~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~ 96 (297)
T PRK10593 53 VAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERLR 96 (297)
T ss_pred HHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEeccC
Confidence 578899999888764 579999988754 366899999976
No 468
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=59.61 E-value=22 Score=28.40 Aligned_cols=60 Identities=18% Similarity=0.122 Sum_probs=38.2
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHHHhCCCcchHHHHHHHHhh
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFELCGFRFSLKTVLMIAQQL 87 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~~~~~~~sL~tE~~v~~ql 87 (143)
.|+.+++.+ +.+++++++++.. .+.+.+++||.. |.+|.+.... .+.++......++.++
T Consensus 80 ~E~~~l~~l---~hp~Iv~~~~~~~---------~~~~~~lv~Ey~~~g~L~~~i~~-~~~~~~~~~~~~~~qi 140 (340)
T PTZ00426 80 SERKILNYI---NHPFCVNLYGSFK---------DESYLYLVLEFVIGGEFFTFLRR-NKRFPNDVGCFYAAQI 140 (340)
T ss_pred HHHHHHHhC---CCCCCcceEEEEE---------eCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHH
Confidence 466666655 2467888877655 455669999987 6788776543 3355555555555554
No 469
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=59.54 E-value=12 Score=27.91 Aligned_cols=62 Identities=15% Similarity=0.072 Sum_probs=38.2
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHHHhCCCcchHHHHHHHHhh
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFELCGFRFSLKTVLMIAQQL 87 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~~~~~~~sL~tE~~v~~ql 87 (143)
++.|+++++.+. .++++++++++. .+.+.++++|.. |.+|.+..... +.+.......++.++
T Consensus 53 ~~~e~~~l~~l~---h~~i~~~~~~~~---------~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l 115 (267)
T cd06628 53 LAREIALLKELQ---HENIVQYLGSSL---------DADHLNIFLEYVPGGSVAALLNNY-GAFEETLVRNFVRQI 115 (267)
T ss_pred HHHHHHHHHhcC---CCCeeeEEEEEE---------eCCccEEEEEecCCCCHHHHHHhc-cCccHHHHHHHHHHH
Confidence 445677777663 357888888876 556668999976 56777765432 234444444444443
No 470
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=59.16 E-value=14 Score=27.58 Aligned_cols=35 Identities=26% Similarity=0.394 Sum_probs=23.9
Q ss_pred chHHHHHHHHhhhcC-CcccEEEEeeecCCeeEEeecccC
Q psy16459 76 SLKTVLMIAQQLQSN-KGIPEVYYFGPCGKYNALVMELLG 114 (143)
Q Consensus 76 sL~tE~~v~~ql~~~-~~~P~l~~~G~~~~~~~iVM~LlG 114 (143)
+.+.|.+.+..+... ..+|+.+++. .+++|||.+|
T Consensus 54 ~~~~E~~~L~~l~~~Gv~vP~p~~~~----~~~ivME~I~ 89 (188)
T PF01163_consen 54 WAKKEFRNLKRLYEAGVPVPKPYDYN----RNVIVMEYIG 89 (188)
T ss_dssp HHHHHHHHHHHCCCTT-SS--EEEEE----TTEEEEE--E
T ss_pred HHHHHHHHHHHHHHCCccCCcEEEEe----CCEEEEEecC
Confidence 457788888888775 4689999885 4799999999
No 471
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=58.76 E-value=21 Score=27.11 Aligned_cols=61 Identities=11% Similarity=-0.000 Sum_probs=37.2
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHh----CCCcchHHHHHHHHh
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELC----GFRFSLKTVLMIAQQ 86 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~----~~~~sL~tE~~v~~q 86 (143)
.|+.++..+ .+.++++++++++. .+...+++||+.+.++.++.... ...+.......+..+
T Consensus 51 ~e~~~l~~~--~~~~~iv~~~~~~~---------~~~~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~ 115 (288)
T cd06616 51 MDLDVVMRS--SDCPYIVKFYGALF---------REGDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVA 115 (288)
T ss_pred HHHHHHHHh--cCCCCEeeeeeEEe---------cCCcEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHH
Confidence 355555444 44568888887765 44455899999999888765421 234444444444444
No 472
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=58.20 E-value=17 Score=27.09 Aligned_cols=64 Identities=14% Similarity=0.080 Sum_probs=41.6
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHHHh-CCCcchHHHHHHHHhhh
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFELC-GFRFSLKTVLMIAQQLQ 88 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~~~-~~~~sL~tE~~v~~ql~ 88 (143)
+..|+++++.+. .+++++++.+.. .+...+++||.. |.+|.+..... +..++......++.++.
T Consensus 48 ~~~e~~~l~~l~---h~~i~~~~~~~~---------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~ 113 (261)
T cd05068 48 FLAEAQIMKKLR---HPKLIQLYAVCT---------LEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVA 113 (261)
T ss_pred HHHHHHHHHHCC---CCCccceeEEEe---------cCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHH
Confidence 334677777663 346777776654 344458999998 88998876543 34566666666666553
No 473
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=58.19 E-value=1.2e+02 Score=26.18 Aligned_cols=23 Identities=17% Similarity=0.235 Sum_probs=18.1
Q ss_pred eeeeeeeeccCCCCCCCCceEEEccceeeccC
Q psy16459 14 KCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTD 45 (143)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d 45 (143)
+.+|++.++++.++ ||.||++.+
T Consensus 144 ~d~F~i~~~LG~Gg---------FG~VYkG~~ 166 (507)
T PLN03224 144 SDDFQLRDKLGGGN---------FGITFEGLR 166 (507)
T ss_pred ccCceEeeEeecCC---------CeEEEEEEe
Confidence 44788888887766 999998764
No 474
>KOG0668|consensus
Probab=57.96 E-value=6 Score=31.50 Aligned_cols=102 Identities=12% Similarity=0.133 Sum_probs=65.4
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccE
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPE 95 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~ 95 (143)
.++|..+++.+. |..||.+....+++++ .+|+= ..-++.-++.|+.++..+.|.+.+-+
T Consensus 39 dYeivrk~GRGK---------YSEVFeg~~~~~~eK~-ViKiL-----------KPVkkkKIkREikIL~nL~gg~NIi~ 97 (338)
T KOG0668|consen 39 DYEIVRKVGRGK---------YSEVFEGINITNNEKC-VIKIL-----------KPVKKKKIKREIKILQNLRGGPNIIK 97 (338)
T ss_pred hHHHHHHHcCcc---------HhhHhcccccCCCceE-EEeee-----------chHHHHHHHHHHHHHHhccCCCCeee
Confidence 345666664433 7789999999999988 55552 11123347889999999999999988
Q ss_pred EEEeeecC--CeeEEeecccCc-CHHHHHHhcCCCCCHHHHHHHHHHHhc
Q psy16459 96 VYYFGPCG--KYNALVMELLGP-SLEDLFDLCNRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 96 l~~~G~~~--~~~~iVM~LlG~-sL~~l~~~~~~~fs~~T~~~ia~q~l~ 142 (143)
+++.=+++ +..-+|.|.+.. +...|+ .+++...+..-..|+|+
T Consensus 98 L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly----~tl~d~dIryY~~elLk 143 (338)
T KOG0668|consen 98 LLDIVKDPESKTPSLIFEYVNNTDFKQLY----PTLTDYDIRYYIYELLK 143 (338)
T ss_pred hhhhhcCccccCchhHhhhhccccHHHHh----hhhchhhHHHHHHHHHH
Confidence 88887654 455566666542 333333 34455555555555543
No 475
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=57.72 E-value=26 Score=27.29 Aligned_cols=61 Identities=11% Similarity=-0.109 Sum_probs=38.5
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhh
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQL 87 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql 87 (143)
.|+++++.+. .+++++++++.. .+.+.++++|....++.+................+..++
T Consensus 70 ~E~~~l~~l~---h~~iv~~~~~~~---------~~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi 130 (313)
T cd06633 70 KEVKFLQQLK---HPNTIEYKGCYL---------KEHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGA 130 (313)
T ss_pred HHHHHHHhCC---CCCCccEEEEEE---------eCCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHH
Confidence 4666666652 357788887766 556679999998888877765444344444444444443
No 476
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=57.52 E-value=16 Score=28.73 Aligned_cols=61 Identities=8% Similarity=-0.045 Sum_probs=36.2
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHHHhCCCcchHHHHHHHHhh
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFELCGFRFSLKTVLMIAQQL 87 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~~~~~~~sL~tE~~v~~ql 87 (143)
.|..++..+ .+.+.++.++++.. ...+.+++||.+ |.+|.+.... .+.+.......++.++
T Consensus 44 ~e~~~~~~~--~~~~~i~~~~~~~~---------~~~~~~lv~e~~~~~~L~~~~~~-~~~l~~~~~~~~~~qi 105 (327)
T cd05617 44 TEKHVFEQA--SSNPFLVGLHSCFQ---------TTSRLFLVIEYVNGGDLMFHMQR-QRKLPEEHARFYAAEI 105 (327)
T ss_pred HHHHHHHhh--cCCCCEeeEEEEEE---------eCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHH
Confidence 344444444 34556778777655 445569999988 6677665432 2345555555555554
No 477
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=57.31 E-value=26 Score=25.79 Aligned_cols=60 Identities=8% Similarity=0.016 Sum_probs=35.9
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHHHhCCCcchHHHHHHHHh
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFELCGFRFSLKTVLMIAQQ 86 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~~~~~~~sL~tE~~v~~q 86 (143)
.|+.+++.+ ..+++++++++.. ...+.+++||.. |.++.+........+.......+..+
T Consensus 41 ~e~~~l~~l---~h~~i~~~~~~~~---------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ 101 (250)
T cd05085 41 SEARILKQY---DHPNIVKLIGVCT---------QRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALD 101 (250)
T ss_pred HHHHHHHhC---CCCCcCeEEEEEe---------cCCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHH
Confidence 466666665 3457888887665 444568999986 56777654433333444444444444
No 478
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=57.30 E-value=26 Score=26.66 Aligned_cols=61 Identities=13% Similarity=0.081 Sum_probs=35.4
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHHHh-CCCcchHHHHHHHHhh
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFELC-GFRFSLKTVLMIAQQL 87 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~~~-~~~~sL~tE~~v~~ql 87 (143)
.|+++++.+. .+++.+++++.. .+.+.+++||.. |.+|.+..... ...........++.++
T Consensus 42 ~E~~il~~l~---hp~i~~~~~~~~---------~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi 104 (277)
T cd05607 42 LEKEILEKVN---SPFIVNLAYAFE---------SKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQI 104 (277)
T ss_pred HHHHHHHhcC---CCcEEEEEEEEe---------cCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHH
Confidence 3777777662 346666655443 455669999987 67887664332 2234444444444443
No 479
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=57.24 E-value=26 Score=26.25 Aligned_cols=63 Identities=13% Similarity=0.096 Sum_probs=37.9
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHHHhCCCcchHHHHHHHHhhh
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFELCGFRFSLKTVLMIAQQLQ 88 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~~~~~~~sL~tE~~v~~ql~ 88 (143)
+..|+.+++.++ .+++.+++++.. .+ +.+++||.. |.+|.+........+.......++.++.
T Consensus 42 ~~~E~~~l~~l~---h~~ii~~~~~~~---------~~-~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~ 105 (257)
T cd05115 42 MMREAEIMHQLD---NPYIVRMIGVCE---------AE-ALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVS 105 (257)
T ss_pred HHHHHHHHHhcC---CCCeEEEEEEEc---------CC-CeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence 445777777763 245666665432 33 348899977 5677776543344566666666666553
No 480
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=57.08 E-value=17 Score=29.04 Aligned_cols=62 Identities=6% Similarity=0.043 Sum_probs=37.1
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHHHhCCCcchHHHHHHHHhh
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFELCGFRFSLKTVLMIAQQL 87 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~~~~~~~sL~tE~~v~~ql 87 (143)
++.|+.+++.+ +.++++++++... .+.+.+++||.+ |.+|.++.... +.++......++.++
T Consensus 48 ~~~E~~il~~~---~~~~iv~~~~~~~---------~~~~~~lv~E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi 110 (363)
T cd05628 48 IRAERDILVEA---DSLWVVKMFYSFQ---------DKLNLYLIMEFLPGGDMMTLLMKK-DTLTEEETQFYIAET 110 (363)
T ss_pred HHHHHHHHHhC---CCCCcceEEEEEe---------cCCeEEEEEcCCCCCcHHHHHHhc-CCCCHHHHHHHHHHH
Confidence 44566666555 3456777776655 455669999987 56777765432 344444444444443
No 481
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=57.00 E-value=19 Score=28.40 Aligned_cols=63 Identities=5% Similarity=-0.046 Sum_probs=37.9
Q ss_pred eeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHHHhCCCcchHHHHHHHHhhh
Q psy16459 14 KCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFELCGFRFSLKTVLMIAQQLQ 88 (143)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~~~~~~~sL~tE~~v~~ql~ 88 (143)
..|..+++.+ .+.+++++++.+.. .+.+.+++||.. |.+|.+.... .+.++......++.++.
T Consensus 43 ~~e~~il~~~--~~hp~Iv~~~~~~~---------~~~~~~lv~e~~~~g~L~~~~~~-~~~l~~~~~~~~~~qi~ 106 (329)
T cd05588 43 QTEKHVFETA--SNHPFLVGLHSCFQ---------TESRLFFVIEFVSGGDLMFHMQR-QRKLPEEHARFYSAEIS 106 (329)
T ss_pred HHHHHHHHhc--cCCCCCCceEEEEE---------cCCEEEEEEeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 3455555444 35567888876654 445569999977 5577655432 34566666655555554
No 482
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=56.99 E-value=15 Score=27.80 Aligned_cols=62 Identities=15% Similarity=0.045 Sum_probs=40.2
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhC-CCcchHHHHHHHHhhh
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCG-FRFSLKTVLMIAQQLQ 88 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~-~~~sL~tE~~v~~ql~ 88 (143)
.|+++++.+. .+++++++.+.. .+.+.++++|..+.++.+...... ..+.......++.++.
T Consensus 47 ~E~~~l~~l~---~~~iv~~~~~~~---------~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~ 109 (283)
T cd07835 47 REISLLKELN---HPNIVRLLDVVH---------SENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLL 109 (283)
T ss_pred HHHHHHHhcC---CCCccCHhheec---------cCCeEEEEEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHH
Confidence 4666666653 457888887765 556679999999888877654332 2455666555555543
No 483
>PLN02876 acyl-CoA dehydrogenase
Probab=56.92 E-value=37 Score=30.95 Aligned_cols=71 Identities=18% Similarity=0.187 Sum_probs=44.3
Q ss_pred ccceeeccCCCCC--CceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhc--CCcccEEEEeeecC---CeeEEe
Q psy16459 37 FGKVMDKTDKPSG--GGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQS--NKGIPEVYYFGPCG---KYNALV 109 (143)
Q Consensus 37 fG~vy~v~d~~~~--~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~--~~~~P~l~~~G~~~---~~~~iV 109 (143)
++.+|.+.....+ ..| +++....+..+.. ...+..|..++..+.. ..-+|+.++.+... ...|+|
T Consensus 51 sn~ty~l~~~~~~~~~~~-VLR~~p~~~~~~~-------~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV 122 (822)
T PLN02876 51 SNPTFLLEVGNGGSVKRY-VLRKKPPGKLLQS-------AHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI 122 (822)
T ss_pred cCceEEEEECCCCcceeE-EEEeCCCCccCcc-------HHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence 4567776543322 244 6666554432211 1247789999988864 34568988887654 467899
Q ss_pred ecccCc
Q psy16459 110 MELLGP 115 (143)
Q Consensus 110 M~LlG~ 115 (143)
||.+.-
T Consensus 123 ME~v~G 128 (822)
T PLN02876 123 MEYLEG 128 (822)
T ss_pred EEecCC
Confidence 999764
No 484
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=56.86 E-value=16 Score=28.68 Aligned_cols=64 Identities=14% Similarity=-0.052 Sum_probs=40.0
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHHHh-CCCcchHHHHHHHHhhh
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFELC-GFRFSLKTVLMIAQQLQ 88 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~~~-~~~~sL~tE~~v~~ql~ 88 (143)
++.|+.+++.+ +-+++.+++++.. .+.+.++++|.. +.++.++.... .+.++......++.++.
T Consensus 46 ~~~e~~~l~~l---~hpniv~~~~~~~---------~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~ 111 (327)
T cd08227 46 LQGELHVSKLF---NHPNIVPYRATFI---------ADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVL 111 (327)
T ss_pred HHHHHHHHHhc---CCCCeeeEEEEEE---------ECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHH
Confidence 44566666655 2356777776655 445568999987 46788776543 33455566666666554
No 485
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=56.85 E-value=15 Score=29.05 Aligned_cols=46 Identities=11% Similarity=0.075 Sum_probs=32.6
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHHH
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFEL 70 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~~ 70 (143)
+..|+.+++.++ .+++++++++.. .+.+.+++||.+ |.+|.++...
T Consensus 50 ~~~E~~~l~~l~---h~~iv~~~~~~~---------~~~~~~lv~e~~~~~~L~~~l~~ 96 (333)
T cd06650 50 IIRELQVLHECN---SPYIVGFYGAFY---------SDGEISICMEHMDGGSLDQVLKK 96 (333)
T ss_pred HHHHHHHHHHCC---CCcccceeEEEE---------ECCEEEEEEecCCCCcHHHHHHH
Confidence 456788887773 457888877655 344569999987 6788887643
No 486
>KOG0984|consensus
Probab=56.69 E-value=44 Score=26.30 Aligned_cols=97 Identities=16% Similarity=0.064 Sum_probs=57.2
Q ss_pred EccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccCc
Q psy16459 36 FFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLGP 115 (143)
Q Consensus 36 ~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG~ 115 (143)
+||.|-+.+...++.-. |.|= ....+.+-. ...+-.|+.+......|+..-++|+.=....--+|-||+..-
T Consensus 58 ayG~vekmrh~~sg~im-AvKr--i~~tvn~q~-----q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~t 129 (282)
T KOG0984|consen 58 AYGVVEKMRHIQSGTIM-AVKR--IRATVNSQE-----QKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMDT 129 (282)
T ss_pred ccchhhheeeccCCeEE-EEee--ehhhcChHH-----HHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhhh
Confidence 37777777777766633 3322 111111110 112445666666555666655666655556678899999999
Q ss_pred CHHHHHHhc---CCCCCHHHHHHHHHHH
Q psy16459 116 SLEDLFDLC---NRKFTLKTVLMIAIQL 140 (143)
Q Consensus 116 sL~~l~~~~---~~~fs~~T~~~ia~q~ 140 (143)
||..+++.. ++...-.-.-+||.-.
T Consensus 130 Sldkfy~~v~~~g~~ipE~vlGkIa~Sv 157 (282)
T KOG0984|consen 130 SLDKFYRKVLKKGGTIPEDVLGKIAVSV 157 (282)
T ss_pred hHHHHHHHHHhcCCcCchHHhhHhHHHH
Confidence 999998764 5555555555555443
No 487
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=56.62 E-value=21 Score=27.97 Aligned_cols=61 Identities=13% Similarity=0.178 Sum_probs=41.4
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhh
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQ 88 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~ 88 (143)
.|+++++.+. .+++++++++.. .+.+.+++||....++.+.... ....+......++.++.
T Consensus 69 ~E~~~l~~l~---h~~iv~~~~~~~---------~~~~~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~~~ql~ 129 (335)
T PTZ00024 69 RELKIMNEIK---HENIMGLVDVYV---------EGDFINLVMDIMASDLKKVVDR-KIRLTESQVKCILLQIL 129 (335)
T ss_pred HHHHHHHhCC---CcceeeeeEEEe---------cCCcEEEEEeccccCHHHHHHh-cCCCCHHHHHHHHHHHH
Confidence 4667776662 357777777665 5567799999998888877543 33566666666666654
No 488
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=56.42 E-value=7.8 Score=28.91 Aligned_cols=64 Identities=11% Similarity=0.041 Sum_probs=39.5
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCC-CCHHHHHHHhCCCcchHHHHHHHHhhh
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLG-PSLQDLFELCGFRFSLKTVLMIAQQLQ 88 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg-~sl~~l~~~~~~~~sL~tE~~v~~ql~ 88 (143)
+..|+++++.+. .+++++++.+.. .+.+.++++|..+ .+|.++.......+.......+..++.
T Consensus 46 ~~~e~~~l~~~~---~~~i~~~~~~~~---------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~ 110 (265)
T cd06605 46 ILRELDILHKCN---SPYIVGFYGAFY---------NNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVL 110 (265)
T ss_pred HHHHHHHHHHCC---CCchhhhheeee---------cCCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHH
Confidence 344666666653 446777666554 3455699999887 888887655434555555555555443
No 489
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=56.41 E-value=28 Score=26.45 Aligned_cols=60 Identities=10% Similarity=-0.107 Sum_probs=36.2
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHh
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQ 86 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~q 86 (143)
.|+.+++.++ .++++++++++. .+.+.++++|..+.++.+................++.+
T Consensus 52 ~e~~~l~~l~---h~ni~~~~~~~~---------~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~q 111 (291)
T cd07870 52 REASLLKGLK---HANIVLLHDIIH---------TKETLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQ 111 (291)
T ss_pred HHHHHHHhcC---CCCEeEEEEEEe---------cCCeEEEEEecccCCHHHHHHhCCCCCCHHHHHHHHHH
Confidence 4666666663 356788888765 55566899999988887654332223333333334433
No 490
>KOG0200|consensus
Probab=56.36 E-value=1.3e+02 Score=26.49 Aligned_cols=99 Identities=16% Similarity=0.048 Sum_probs=65.1
Q ss_pred EEccceeeccCCCCC------CceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhcCCcccEEEEeeecCCeeEE
Q psy16459 35 YFFGKVMDKTDKPSG------GGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQSNKGIPEVYYFGPCGKYNAL 108 (143)
Q Consensus 35 ~~fG~vy~v~d~~~~------~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~i 108 (143)
..||+|+++.-.+-. ..--|+||-.-..+-. ....+..|+.++..+..-+++-.+.++..++...++
T Consensus 307 g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~-------~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~ 379 (609)
T KOG0200|consen 307 GAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSS-------EKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYV 379 (609)
T ss_pred ccccceEeEEEeecccccccceEEEEEEecccccCcH-------HHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEE
Confidence 348888876422111 2223556643322221 134578899999988877788888888888889999
Q ss_pred eecccCc-CHHHHHHhcC---------------CCCCHHHHHHHHHHH
Q psy16459 109 VMELLGP-SLEDLFDLCN---------------RKFTLKTVLMIAIQL 140 (143)
Q Consensus 109 VM~LlG~-sL~~l~~~~~---------------~~fs~~T~~~ia~q~ 140 (143)
|+|.+.. +|.+..+... -..+..-.+.+|.|+
T Consensus 380 v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QI 427 (609)
T KOG0200|consen 380 IVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQI 427 (609)
T ss_pred EEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHH
Confidence 9999875 6666544332 127788888888885
No 491
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=56.36 E-value=27 Score=27.33 Aligned_cols=52 Identities=17% Similarity=0.199 Sum_probs=32.9
Q ss_pred CCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHHHhCCCcchHHHHHHHHhh
Q psy16459 26 PPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFELCGFRFSLKTVLMIAQQL 87 (143)
Q Consensus 26 ~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~~~~~~~sL~tE~~v~~ql 87 (143)
.+.+.+++++++.. .+.+.+++||.. |.+|.+..... ..+.......++.++
T Consensus 53 ~~hp~iv~~~~~~~---------~~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~~~qi 105 (316)
T cd05619 53 WEHPFLTHLYCTFQ---------TKENLFFVMEYLNGGDLMFHIQSC-HKFDLPRATFYAAEI 105 (316)
T ss_pred cCCCcCcceEEEEE---------eCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHH
Confidence 34567888776654 445569999986 66887765433 345555555555554
No 492
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=56.12 E-value=20 Score=27.36 Aligned_cols=64 Identities=16% Similarity=0.009 Sum_probs=39.4
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhh
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQ 88 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~ 88 (143)
.|+.+++.+. .++++.++.+.. ++...+.++++|.++.++.++.......++......++.++.
T Consensus 53 ~e~~~l~~l~---h~ni~~~~~~~~-------~~~~~~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~ 116 (293)
T cd07843 53 REINILLKLQ---HPNIVTVKEVVV-------GSNLDKIYMVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLL 116 (293)
T ss_pred HHHHHHHhcC---CCCEEEEEEEEE-------ecCCCcEEEEehhcCcCHHHHHHhccCCCCHHHHHHHHHHHH
Confidence 3666666663 356677766533 012255699999998888877655444566666666665543
No 493
>KOG0600|consensus
Probab=56.10 E-value=13 Score=32.30 Aligned_cols=65 Identities=20% Similarity=0.236 Sum_probs=44.8
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhhc
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQS 89 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~~ 89 (143)
+||.||+.++-++....- |-|+. . ..+.. |||.|.+..+|.-+....+-+|+....-.++.|+..
T Consensus 165 REI~ILr~l~HpNIikL~-----eivt~---~-~~~si-YlVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~ 229 (560)
T KOG0600|consen 165 REIKILRRLDHPNIIKLE-----EIVTS---K-LSGSI-YLVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLE 229 (560)
T ss_pred HHHHHHHhcCCCccccee-----eEEEe---c-CCceE-EEEEecccchhhhhhcCCCcccChHHHHHHHHHHHH
Confidence 478888877655533222 22221 1 13345 899999999999887666778999999899999765
No 494
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=55.90 E-value=29 Score=25.68 Aligned_cols=63 Identities=14% Similarity=0.053 Sum_probs=39.3
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHHHh-CCCcchHHHHHHHHhh
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFELC-GFRFSLKTVLMIAQQL 87 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~~~-~~~~sL~tE~~v~~ql 87 (143)
+..|+.+++.+. .+++++++++.. .+.+.++++|.. |.+|.+..... +..++......++.++
T Consensus 46 ~~~e~~~l~~~~---h~~i~~~~~~~~---------~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l 110 (256)
T cd08221 46 ALNEIVILSLLQ---HPNIIAYYNHFM---------DDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQI 110 (256)
T ss_pred HHHHHHHHHhCC---CCCeeEEEeEEe---------cCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHH
Confidence 345777777662 357888887765 455669999986 56888765433 2345555545544443
No 495
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=54.83 E-value=17 Score=27.41 Aligned_cols=46 Identities=11% Similarity=0.057 Sum_probs=30.9
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHH
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFE 69 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~ 69 (143)
+..|+++++.+ .+.+++.+++++.. .+.+.+++||.. +.+|.+...
T Consensus 42 ~~~E~~~l~~l--~~h~~iv~~~~~~~---------~~~~~~lv~e~~~~~~L~~~i~ 88 (270)
T cd05047 42 FAGELEVLCKL--GHHPNIINLLGACE---------HRGYLYLAIEYAPHGNLLDFLR 88 (270)
T ss_pred HHHHHHHHHhh--ccCCCeeeEEEEEe---------cCCCceEEEEeCCCCcHHHHHH
Confidence 34577777666 34567888887765 445568999976 467776643
No 496
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=54.72 E-value=39 Score=25.61 Aligned_cols=69 Identities=10% Similarity=0.031 Sum_probs=40.1
Q ss_pred eeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHh-CCCcchHHHHHHHHhhh
Q psy16459 16 QFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELC-GFRFSLKTVLMIAQQLQ 88 (143)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~-~~~~sL~tE~~v~~ql~ 88 (143)
|+.+++.+..-.-+++++++++.. ..... .+...++++|..+.++.+..... ....+......++.++.
T Consensus 51 e~~~l~~l~~~~hpniv~~~~~~~---~~~~~-~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~ 120 (290)
T cd07862 51 EVAVLRHLETFEHPNVVRLFDVCT---VSRTD-RETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLL 120 (290)
T ss_pred HHHHHHhhcccCCCCcceEEEEEe---cccCC-CCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 566666554334567888776432 11112 23344899999998888776543 23355555555655543
No 497
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=54.37 E-value=29 Score=27.15 Aligned_cols=62 Identities=10% Similarity=-0.002 Sum_probs=37.6
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHHHhCCCcchHHHHHHHHhhh
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFELCGFRFSLKTVLMIAQQLQ 88 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~~~~~~~sL~tE~~v~~ql~ 88 (143)
.|..+++.+ .+.+++++++.+.. .+.+.+++||.. |.+|.+.... .+.+.......++.++.
T Consensus 44 ~e~~il~~~--~~h~~i~~~~~~~~---------~~~~~~lv~e~~~~~~L~~~~~~-~~~l~~~~~~~~~~qi~ 106 (318)
T cd05570 44 TEKRVLALA--GKHPFLTQLHSCFQ---------TKDRLFFVMEYVNGGDLMFHIQR-SGRFDEPRARFYAAEIV 106 (318)
T ss_pred HHHHHHHhc--cCCCCccceeeEEE---------cCCEEEEEEcCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 455555554 34568888877644 444569999987 5677655433 23566665555555543
No 498
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=53.81 E-value=51 Score=25.04 Aligned_cols=70 Identities=11% Similarity=0.111 Sum_probs=41.5
Q ss_pred eeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecCCCCHHHHHHHhCCCcchHHHHHHHHhhh
Q psy16459 15 CQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLLGPSLQDLFELCGFRFSLKTVLMIAQQLQ 88 (143)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ellg~sl~~l~~~~~~~~sL~tE~~v~~ql~ 88 (143)
.|+.+++.+.. +++.+++++.......+.. .....++++|..+.++.+.....+..++......++.++.
T Consensus 60 ~e~~~l~~l~h---~~iv~~~~~~~~~~~~~~~-~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~ 129 (310)
T cd07865 60 REIKILQLLKH---ENVVNLIEICRTKATPYNR-YKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLL 129 (310)
T ss_pred HHHHHHHhCCC---CCccceEEEEecccccccC-CCceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHH
Confidence 36666666632 3566666554322222122 2334599999999988877654444567777667666654
No 499
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=53.76 E-value=22 Score=28.64 Aligned_cols=45 Identities=13% Similarity=0.191 Sum_probs=30.2
Q ss_pred eeeeeeeeeccCCCCCCCCceEEEccceeeccCCCCCCceeEEEEecC-CCCHHHHHH
Q psy16459 13 LKCQFSLEGMEDDPPPHGFPRVYFFGKVMDKTDKPSGGGYQALVLSLL-GPSLQDLFE 69 (143)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~fG~vy~v~d~~~~~~~~a~~~Ell-g~sl~~l~~ 69 (143)
+..|+.+++.+ +.++++++++... .+.+.+++||.+ |.+|.++..
T Consensus 48 ~~~E~~il~~~---~h~~iv~~~~~~~---------~~~~~~lv~E~~~gg~L~~~l~ 93 (382)
T cd05625 48 VKAERDILAEA---DNEWVVRLYYSFQ---------DKDNLYFVMDYIPGGDMMSLLI 93 (382)
T ss_pred HHHHHHHHHhC---CCCcCCeEEEEEE---------eCCEEEEEEeCCCCCcHHHHHH
Confidence 44566677665 3357888877665 455669999986 557777654
No 500
>KOG0603|consensus
Probab=53.61 E-value=27 Score=31.02 Aligned_cols=64 Identities=20% Similarity=0.075 Sum_probs=41.5
Q ss_pred hHHHHHHHHhhhcCCcccEEEEeeecCCeeEEeecccCcCHHHHHHhc-CCCCCHHHHHHHHHHHhc
Q psy16459 77 LKTVLMIAQQLQSNKGIPEVYYFGPCGKYNALVMELLGPSLEDLFDLC-NRKFTLKTVLMIAIQLEG 142 (143)
Q Consensus 77 L~tE~~v~~ql~~~~~~P~l~~~G~~~~~~~iVM~LlG~sL~~l~~~~-~~~fs~~T~~~ia~q~l~ 142 (143)
...|.-++....+.+.+-++++.-..+.+.|+||+++...+.- ++.. .+.|+ +.+..++.|++.
T Consensus 362 ~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~ell-~ri~~~~~~~-~e~~~w~~~lv~ 426 (612)
T KOG0603|consen 362 NQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGGELL-RRIRSKPEFC-SEASQWAAELVS 426 (612)
T ss_pred cccccchhhhhcCCCcceeecceecCCceeeeeehhccccHHH-HHHHhcchhH-HHHHHHHHHHHH
Confidence 3445555555556666777777777789999999999765432 2222 45666 666667777653
Done!